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Sample records for aligned coupling scheme

  1. Novel coupling scheme to control dynamics of coupled discrete systems

    Science.gov (United States)

    Shekatkar, Snehal M.; Ambika, G.

    2015-08-01

    We present a new coupling scheme to control spatio-temporal patterns and chimeras on 1-d and 2-d lattices and random networks of discrete dynamical systems. The scheme involves coupling with an external lattice or network of damped systems. When the system network and external network are set in a feedback loop, the system network can be controlled to a homogeneous steady state or synchronized periodic state with suppression of the chaotic dynamics of the individual units. The control scheme has the advantage that its design does not require any prior information about the system dynamics or its parameters and works effectively for a range of parameters of the control network. We analyze the stability of the controlled steady state or amplitude death state of lattices using the theory of circulant matrices and Routh-Hurwitz criterion for discrete systems and this helps to isolate regions of effective control in the relevant parameter planes. The conditions thus obtained are found to agree well with those obtained from direct numerical simulations in the specific context of lattices with logistic map and Henon map as on-site system dynamics. We show how chimera states developed in an experimentally realizable 2-d lattice can be controlled using this scheme. We propose this mechanism can provide a phenomenological model for the control of spatio-temporal patterns in coupled neurons due to non-synaptic coupling with the extra cellular medium. We extend the control scheme to regulate dynamics on random networks and adapt the master stability function method to analyze the stability of the controlled state for various topologies and coupling strengths.

  2. Molecular alignment effect on the photoassociation process via a pump-dump scheme.

    Science.gov (United States)

    Wang, Bin-Bin; Han, Yong-Chang; Cong, Shu-Lin

    2015-09-07

    The photoassociation processes via the pump-dump scheme for the heternuclear (Na + H → NaH) and the homonuclear (Na + Na → Na2) molecular systems are studied, respectively, using the time-dependent quantum wavepacket method. For both systems, the initial atom pair in the continuum of the ground electronic state (X(1)Σ(+)) is associated into the molecule in the bound states of the excited state (A(1)Σ(+)) by the pump pulse. Then driven by a time-delayed dumping pulse, the prepared excited-state molecule can be transferred to the bound states of the ground electronic state. It is found that the pump process can induce a superposition of the rovibrational levels |v, j〉 on the excited state, which can lead to the field-free alignment of the excited-state molecule. The molecular alignment can affect the dumping process by varying the effective coupling intensity between the two electronic states or by varying the population transfer pathways. As a result, the final population transferred to the bound states of the ground electronic state varies periodically with the delay time of the dumping pulse.

  3. Molecular alignment effect on the photoassociation process via a pump-dump scheme

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Bin-Bin; Han, Yong-Chang, E-mail: ychan@dlut.edu.cn; Cong, Shu-Lin [School of Physics and Optoelectronic Technology, Dalian University of Technology, Dalian 116024 (China)

    2015-09-07

    The photoassociation processes via the pump-dump scheme for the heternuclear (Na + H → NaH) and the homonuclear (Na + Na → Na{sub 2}) molecular systems are studied, respectively, using the time-dependent quantum wavepacket method. For both systems, the initial atom pair in the continuum of the ground electronic state (X{sup 1}Σ{sup +}) is associated into the molecule in the bound states of the excited state (A{sup 1}Σ{sup +}) by the pump pulse. Then driven by a time-delayed dumping pulse, the prepared excited-state molecule can be transferred to the bound states of the ground electronic state. It is found that the pump process can induce a superposition of the rovibrational levels |v, j〉 on the excited state, which can lead to the field-free alignment of the excited-state molecule. The molecular alignment can affect the dumping process by varying the effective coupling intensity between the two electronic states or by varying the population transfer pathways. As a result, the final population transferred to the bound states of the ground electronic state varies periodically with the delay time of the dumping pulse.

  4. A combined alignment and registration scheme of psoriasis lesion |images

    DEFF Research Database (Denmark)

    Maletti, Gabriela Mariel; Ersbøll, Bjarne Kjær

    2003-01-01

    A two-stage registration scheme of psoriasis lesion patterns is proposed. In the first stage, global rotation and translation effects of assumed equally scaled psoriasis lesion patterns are removed. In the second stage, only local translation effects are removed. In both stages a novel algorithm ...... for extreme value detection is applied. The output of each stage is evaluated with the M.A.D. transform and the correlation coefficient. Results are shown for real examples...

  5. DOE Project 353: TAMS Prototype and production coupling alignment units

    Energy Technology Data Exchange (ETDEWEB)

    Field, K.V.

    1996-02-01

    TAMS is an electronic measurement system used to determine the alignment of turbine-generator shafts at the coupling interface. The displacement transducer is a strain gage based sensor mounted in a portable probe. The measurement system was experiencing zero input drift and temperature induced drift. This project endeavored to determine the source of these problems and to revise a unit to be returned to a customer, Baltimore Gas and Electric (BGE), within a period of five weeks.

  6. Complete Synchronization in Coupled Chaotic HR Neurons with Symmetric Coupling Schemes

    Institute of Scientific and Technical Information of China (English)

    WANG Hai-Xia; LU Qi-Shao; WANG Qing-Yun

    2005-01-01

    @@ Chaos synchronization in an array of coupled chaotic neurons with symmetric coupling is investigated. A criterion for the stability of the synchronization manifold is deduced by transforming the variational equation of the coupled system into a block diagonal one, and the critical coupling strengths for synchronization in different coupled cases are given. As examples for illustration, the HR neurons with the open-ended (i.e. chain), ring, star and all-to-all(i.e. global) coupling schemes are considered. It is shown that the coupling scheme plays an important role in synchronization and information transmission of neurons.

  7. Rhythm Synchronization of Coupled Neurons with Temporal Coding Scheme

    Institute of Scientific and Technical Information of China (English)

    SHI Xia; LU Qi-Shao

    2007-01-01

    Encoding information by firing patterns is one of the basic neural functions, and synchronization is important collective behaviour of a group of coupled neurons. Taking account of two schemes for encoding information (that is, rate coding and temporal coding), rhythm synchronization of coupled neurons is studied. There are two types of rhythm synchronization of neurons: spike and burst synchronizations. Firstly, it is shown that the spike synchronization is equivalent to the phase synchronization for coupled neurons. Secondly, the similarity function of the slow variables of neurons, which have relevant to the bursting process, is proposed to judge the burst synchronization. It is also found that the burst synchronization can be achieved more easily than the spike synchronization, whatever the firing patterns of the neurons are. Hence the temporal encoding scheme, which is closely related to both the spike and burst synchronizations, is more comprehensive than the rate coding scheme in essence.

  8. A scheme for multiple sequence alignment optimization--an improvement based on family representative mechanics features.

    Science.gov (United States)

    Liu, Xin; Zhao, Ya-Pu

    2009-12-21

    As a basic tool of modern biology, sequence alignment can provide us useful information in fold, function, and active site of protein. For many cases, the increased quality of sequence alignment means a better performance. The motivation of present work is to increase ability of the existing scoring scheme/algorithm by considering residue-residue correlations better. Based on a coarse-grained approach, the hydrophobic force between each pair of residues is written out from protein sequence. It results in the construction of an intramolecular hydrophobic force network that describes the whole residue-residue interactions of each protein molecule, and characterizes protein's biological properties in the hydrophobic aspect. A former work has suggested that such network can characterize the top weighted feature regarding hydrophobicity. Moreover, for each homologous protein of a family, the corresponding network shares some common and representative family characters that eventually govern the conservation of biological properties during protein evolution. In present work, we score such family representative characters of a protein by the deviation of its intramolecular hydrophobic force network from that of background. Such score can assist the existing scoring schemes/algorithms, and boost up the ability of multiple sequences alignment, e.g. achieving a prominent increase (approximately 50%) in searching the structurally alike residue segments at a low identity level. As the theoretical basis is different, the present scheme can assist most existing algorithms, and improve their efficiency remarkably.

  9. A Novel Joint Power and Feedback Bit Allocation Interference Alignment Scheme for Wireless Sensor Networks

    Science.gov (United States)

    Li, Shibao; He, Chang; Wang, Yixin; Zhang, Yang; Liu, Jianhang; Huang, Tingpei

    2017-01-01

    It is necessary to improve the energy efficiency of batteries in wireless sensor networks (WSNs). The multiple-input multiple-output (MIMO) technique has become an important means to ameliorate WSNs, and interference management is the core of improving energy efficiency. A promising approach is interference alignment (IA), which effectively reduces the interference and improves the throughput of a system in the MIMO interference channels. However, the IA scheme requires perfect channel state information (CSI) at all transceivers in practice, which results in considerable feedback overhead. Thus, limited IA feedback has attracted much attention. In this paper, we analyze the throughput loss of the K-user MIMO interference channels when each transmitter delivers multiple streams in one slot, and derives the upper-bound of the system interference leakage and throughput loss. Then, to reduce the interference leakage and throughput loss for the MIMO interference alignment with limited feedback, a joint power and feedback bit allocation optimization scheme is proposed. The simulation results show that, compared with the conventional schemes, the presented optimal scheme achieves less residual interference and better performance in the system throughput. PMID:28287434

  10. Scheme variations of the QCD coupling and hadronic $\\tau$ decays

    CERN Document Server

    Boito, Diogo; Miravitllas, Ramon

    2016-01-01

    The Quantum Chromodynamics (QCD) coupling, $\\alpha_s$, is not a physical observable of the theory since it depends on conventions related to the renormalization procedure. We introduce a definition of the QCD coupling, denoted by $\\widehat\\alpha_s$, whose running is explicitly renormalization scheme invariant. The scheme dependence of the new coupling $\\widehat\\alpha_s$ is parameterized by a single parameter $C$, related to transformations of the QCD scale $\\Lambda$. It is demonstrated that appropriate choices of $C$ can lead to substantial improvements in the perturbative prediction of physical observables. As phenomenological applications, we study $e^+e^-$ scattering and decays of the $\\tau$ lepton into hadrons, both being governed by the QCD Adler function.

  11. A Novel Scheme for DVL-Aided SINS In-Motion Alignment Using UKF Techniques

    Directory of Open Access Journals (Sweden)

    Wenqi Wu

    2013-01-01

    Full Text Available In-motion alignment of Strapdown Inertial Navigation Systems (SINS without any geodetic-frame observations is one of the toughest challenges for Autonomous Underwater Vehicles (AUV. This paper presents a novel scheme for Doppler Velocity Log (DVL aided SINS alignment using Unscented Kalman Filter (UKF which allows large initial misalignments. With the proposed mechanism, a nonlinear SINS error model is presented and the measurement model is derived under the assumption that large misalignments may exist. Since a priori knowledge of the measurement noise covariance is of great importance to robustness of the UKF, the covariance-matching methods widely used in the Adaptive KF (AKF are extended for use in Adaptive UKF (AUKF. Experimental results show that the proposed DVL-aided alignment model is effective with any initial heading errors. The performances of the adaptive filtering methods are evaluated with regards to their parameter estimation stability. Furthermore, it is clearly shown that the measurement noise covariance can be estimated reliably by the adaptive UKF methods and hence improve the performance of the alignment.

  12. A novel scheme for DVL-aided SINS in-motion alignment using UKF techniques.

    Science.gov (United States)

    Li, Wanli; Wang, Jinling; Lu, Liangqing; Wu, Wenqi

    2013-01-15

    In-motion alignment of Strapdown Inertial Navigation Systems (SINS) without any geodetic-frame observations is one of the toughest challenges for Autonomous Underwater Vehicles (AUV). This paper presents a novel scheme for Doppler Velocity Log (DVL) aided SINS alignment using Unscented Kalman Filter (UKF) which allows large initial misalignments. With the proposed mechanism, a nonlinear SINS error model is presented and the measurement model is derived under the assumption that large misalignments may exist. Since a priori knowledge of the measurement noise covariance is of great importance to robustness of the UKF, the covariance-matching methods widely used in the Adaptive KF (AKF) are extended for use in Adaptive UKF (AUKF). Experimental results show that the proposed DVL-aided alignment model is effective with any initial heading errors. The performances of the adaptive filtering methods are evaluated with regards to their parameter estimation stability. Furthermore, it is clearly shown that the measurement noise covariance can be estimated reliably by the adaptive UKF methods and hence improve the performance of the alignment.

  13. Efficient Z-scheme charge separation in novel vertically aligned ZnO/CdSSe nanotrees

    Science.gov (United States)

    Li, Zhengxin; Nieto-Pescador, Jesus; Carson, Alexander J.; Blake, Jolie C.; Gundlach, Lars

    2016-04-01

    A new tree-like ZnO/CdSSe nanocomposite with CdSSe branches grown on ZnO nanowires prepared via a two-step chemical vapor deposition is presented. The nanotrees (NTs) are vertically aligned on a substrate. The CdSSe branches result in strong visible light absorption and form a type-II heterojunction with the ZnO stem that facilitates efficient electron transfer. A combination of photoluminescence spectroscopy and lifetime measurements indicates that the NTs are promising materials for applications that benefit from a Z-scheme charge transfer mechanism. Vertically aligned branched ZnO nanowires can provide direct electron transport pathways to substrates and allow for efficient charge separation. These advantages of nanoscale hierarchical heterostructures make ZnO/CdSSe NTs a promising semiconductor material for solar cells, and other opto-electronic devices.

  14. A Downlink and Uplink Alignment Scheme for Power Saving in IEEE 802.16 Protocol

    Directory of Open Access Journals (Sweden)

    Jenhui Chen

    2014-01-01

    Full Text Available This study shows the problem of power saving mechanism (PSM that sleep intervals of uplink (UL connections do not synchronize with sleep intervals of downlink (DL connections. That is, the energy of a mobile station (MS is not really saved if the DL connections are in the sleep mode while the UL connections are in normal mode, and vice versa. To avoid the asynchronism of power saving (PS between UL and DL connections, we invent a mechanism of DL connections regulating UL connections, called DL and UL Alignment (DUAL scheme, to improve the energy efficiency for PS. Considering that the buffer size of MS is limited, DUAL uses the mean packet arrival rate of UL λu and a relatively safe threshold of buffer size QT as the parameters to estimate the maximum allowable waiting time to align the UL with the DL connections. To analyze the performance of DUAL, a system model of PS is proposed to evaluate the performance of DUAL under different conditions. The correctness of performance analysis of DUAL is validated by using simulation with realistic parameters. Numerical experiments show that DUAL improves the energy conservation significantly when UL traffic is greater than DL traffic.

  15. A downlink and uplink alignment scheme for power saving in IEEE 802.16 protocol.

    Science.gov (United States)

    Chen, Jenhui; Tarn, Woei-Hwa; Lee, Jiann-Der

    2014-01-01

    This study shows the problem of power saving mechanism (PSM) that sleep intervals of uplink (UL) connections do not synchronize with sleep intervals of downlink (DL) connections. That is, the energy of a mobile station (MS) is not really saved if the DL connections are in the sleep mode while the UL connections are in normal mode, and vice versa. To avoid the asynchronism of power saving (PS) between UL and DL connections, we invent a mechanism of DL connections regulating UL connections, called DL and UL Alignment (DUAL) scheme, to improve the energy efficiency for PS. Considering that the buffer size of MS is limited, DUAL uses the mean packet arrival rate of UL λ u and a relatively safe threshold of buffer size Q T as the parameters to estimate the maximum allowable waiting time to align the UL with the DL connections. To analyze the performance of DUAL, a system model of PS is proposed to evaluate the performance of DUAL under different conditions. The correctness of performance analysis of DUAL is validated by using simulation with realistic parameters. Numerical experiments show that DUAL improves the energy conservation significantly when UL traffic is greater than DL traffic.

  16. Magnetosphere-Ionosphere Coupling and Field-Aligned Currents

    CERN Document Server

    Oliveira, D M

    2015-01-01

    It is presented in this paper a review of one of several interactions between the magnetosphere and the ionosphere through the field-aligned currents (FACs). Some characteristics and physical implications of the currents flowing in a plane perpendicular to the magnetic field at high latitudes are discussed. The behavior of this system as an electric circuit is explained, where momentum and energy are transferred via Poynting flux from the magnetosphere into the ionosphere.

  17. Vehicle to wireless power transfer coupling coil alignment sensor

    Energy Technology Data Exchange (ETDEWEB)

    Miller, John M.; Chambon, Paul H.; Jones, Perry T.; White, Clifford P.

    2016-02-16

    A non-contacting position sensing apparatus includes at least one vehicle-mounted receiver coil that is configured to detect a net flux null when the vehicle is optimally aligned relative to the primary coil in the charging device. Each of the at least one vehicle-mounted receiver coil includes a clockwise winding loop and a counterclockwise winding loop that are substantially symmetrically configured and serially connected to each other. When the non-contacting position sensing apparatus is located directly above the primary coil of the charging device, the electromotive forces from the clockwise winding loop and the counterclockwise region cancel out to provide a zero electromotive force, i.e., a zero voltage reading across the coil that includes the clockwise winding loop and the counterclockwise winding loop.

  18. Numerical schemes for the coupling of compressible and incompressible fluids in several space dimensions

    CERN Document Server

    Neusser, Jochen

    2015-01-01

    We present a numerical scheme for immiscible two-phase flows with one compressible and one incompressible phase. Special emphasis lies in the discussion of the coupling strategy for compressible and incompressible Euler equations to simulate inviscid liquid-vapour flows. To reduce the computational effort further, we also introduce two approximate coupling strategies. The resulting schemes are compared numerically to a fully compressible scheme and show good agreement with these standard algorithm at lower numerical costs.

  19. A New Vortex Initialization Scheme Coupled with WRF-ARW

    Directory of Open Access Journals (Sweden)

    Jimmy Chi Hung Fung

    2017-01-01

    Full Text Available The ability of numerical simulations to predict typhoons has been improved in recent decades. Although the track prediction is satisfactory, the intensity prediction is still far from adequate. Vortex initialization is an efficient method to improve the estimations of the initial conditions for typhoon forecasting. In this paper, a new vortex initialization scheme is developed and evaluated. The scheme requires only observational data of the radius of maximum wind and the max wind speed in addition to the global analysis data. This scheme can also satisfy the vortex boundary conditions, which means that the vortex is continuously merged into the background environment. The scheme has a low computational cost and has the flexibility to adjust the vortex structure. It was evaluated with 3 metrics: track, center sea-level pressure (CSLP, and maximum surface wind speed (MWSP. Simulations were conducted using the WRF-ARW numerical weather prediction model. Super and severe typhoon cases with insufficiently strong initial MWSP were simulated without and with the vortex initialization scheme. The simulation results were compared with the 6-hourly observational data from Hong Kong Observatory (HKO. The vortex initialization scheme improved the intensity (CSLP and MWSP prediction results. The scheme was also compared with other initialization methods and schemes.

  20. Partial alignment and measurement of residual dipolar couplings of proteins under high hydrostatic pressure.

    Science.gov (United States)

    Fu, Yinan; Wand, A Joshua

    2013-08-01

    High-pressure NMR spectroscopy has emerged as a complementary approach for investigating various structural and thermodynamic properties of macromolecules. Noticeably absent from the array of experimental restraints that have been employed to characterize protein structures at high hydrostatic pressure is the residual dipolar coupling, which requires the partial alignment of the macromolecule of interest. Here we examine five alignment media that are commonly used at ambient pressure for this purpose. We find that the spontaneous alignment of Pf1 phage, d(GpG) and a C12E5/n-hexnanol mixture in a magnetic field is preserved under high hydrostatic pressure. However, DMPC/DHPC bicelles and collagen gel are found to be unsuitable. Evidence is presented to demonstrate that pressure-induced structural changes can be identified using the residual dipolar coupling.

  1. Partial alignment and measurement of residual dipolar couplings of proteins under high hydrostatic pressure

    Energy Technology Data Exchange (ETDEWEB)

    Fu, Yinan; Wand, A. Joshua, E-mail: wand@mail.med.upenn.edu [University of Pennsylvania, Department of Biochemistry and Biophysics, Johnson Research Foundation (United States)

    2013-08-15

    High-pressure NMR spectroscopy has emerged as a complementary approach for investigating various structural and thermodynamic properties of macromolecules. Noticeably absent from the array of experimental restraints that have been employed to characterize protein structures at high hydrostatic pressure is the residual dipolar coupling, which requires the partial alignment of the macromolecule of interest. Here we examine five alignment media that are commonly used at ambient pressure for this purpose. We find that the spontaneous alignment of Pf1 phage, d(GpG) and a C12E5/n-hexnanol mixture in a magnetic field is preserved under high hydrostatic pressure. However, DMPC/DHPC bicelles and collagen gel are found to be unsuitable. Evidence is presented to demonstrate that pressure-induced structural changes can be identified using the residual dipolar coupling.

  2. Coupling of a single quantum emitter to end-to-end aligned silver nanowires

    DEFF Research Database (Denmark)

    Kumar, Shailesh; Huck, Alexander; Chen, Yuntian;

    2013-01-01

    observe an enhancement of the NV-centers' decay rate in both cases as a result of the coupling to the plasmons. The devices are nano-assembled with a scanning probe technique. Through simulations, we show that end-to-end aligned silver nanowires can be used as a controllable splitter for emission from...

  3. Flagella as a novel alignment medium for the measurement of residual dipolar couplings in proteins.

    Science.gov (United States)

    Singh, Himanshu; Shukla, Manish; Rao, Basuthkar J; Chary, Kandala V R

    2013-12-18

    The two flexible rod-like flagella (∼500 nm in diameter and 5-15 μm long) of Chlamydomonas reinhardtii, a unicellular green alga, can weakly align molecules in an external magnetic field, thereby enabling the measurement of various residual dipolar couplings in solution NMR spectroscopy.

  4. The right top coupling in the aligned two-Higgs-doublet model

    CERN Document Server

    Ayala, Cesar; Martinez, R; Vidal, Jordi

    2016-01-01

    We compute the right top quark coupling in the aligned two-Higgs-doublet model. In the Standard Model the real part of this coupling is dominated by QCD-gluon-exchange diagram, but the imaginary part, instead, is purely electroweak at one loop. Within this model we show that values for the imaginary part of the coupling up to one order of magnitude larger than the electroweak prediction can be obtained. For the real part of the electroweak contribution we find that it can be up to three orders of magnitude larger than the standard model one. We also present detailed results of the one loop analytical computation.

  5. Atomic electronic states: the L-S and j-j coupling schemes and their correlation

    CERN Document Server

    Li, Wai-Kee

    2014-01-01

    In the first part of this paper, we review the assumption of the L-S coupling scheme, with which we derive the electronic states arising from a given atomic configuration. Then, with the aid of the spectral data of Group 15 elements, it becomes clear that the assumption of the L-S coupling scheme is no longer valid as we go farther and farther down the Periodic Table. In the second part, we introduce the j-j coupling scheme, which is seldom covered in standard inorganic chemistry texts, and contrast the assumptions of the two schemes. Next, we use two worked examples to demonstrate the derivation of electronic states with the j-j coupling scheme. Finally, the correlation between the states derived by L-S and j-j schemes is pictorially shown. It is believed a student, by also studying j-j coupling schemes (by no means a difficult task) along with the L-S scheme, will gain a better understanding of the concept of atomic electronic states.

  6. A Cell-Centered Multiphase ALE Scheme With Structural Coupling

    Energy Technology Data Exchange (ETDEWEB)

    Dunn, Timothy Alan [Univ. of California, Davis, CA (United States)

    2012-04-16

    A novel computational scheme has been developed for simulating compressible multiphase flows interacting with solid structures. The multiphase fluid is computed using a Godunov-type finite-volume method. This has been extended to allow computations on moving meshes using a direct arbitrary-Eulerian- Lagrangian (ALE) scheme. The method has been implemented within a Lagrangian hydrocode, which allows modeling the interaction with Lagrangian structural regions. Although the above scheme is general enough for use on many applications, the ultimate goal of the research is the simulation of heterogeneous energetic material, such as explosives or propellants. The method is powerful enough for application to all stages of the problem, including the initial burning of the material, the propagation of blast waves, and interaction with surrounding structures. The method has been tested on a number of canonical multiphase tests as well as fluid-structure interaction problems.

  7. Source Driver Channel Reduction Schemes Employing Corresponding Pixel Alignments for Current Programming Active-Matrix Organic Light-Emitting Diode Displays

    Science.gov (United States)

    Hong, Soon-Kwang; Oh, Du-Hwan; Jeong, Seok-Hee; Park, Young-Ju; Kim, Byeong-Koo; Ha, Yong-Min; Jang, Jin

    2008-03-01

    We propose two types of novel scheme for reducing the number of output channels of driver-integrated circuit (D-IC) for the current programming compensation pixel structures of active-matrix organic light-emitting diodes (AMOLEDs). One is a 2:1 data demultiplexing technique that can reduce the number of output channels of D-IC by half. The proposed second scheme is a vertically aligned red (R), green (G), and blue (B) subpixel scheme instead of a horizontally aligned R-G-B subpixel one, which is regarded as the conventional pixel alignment scheme. We have also successfully implemented these schemes in a 2.4-in.-sized QCIF + (176 × RGB × 220) AMOLED using p-type excimer laser annealing (ELA) low-temperature polycrystalline silicon (LTPS) technology and evaluated key performance characteristics.

  8. A Difference Scheme for the Coupled KdV Equation 14

    Institute of Scientific and Technical Information of China (English)

    ShaohongZHU

    1999-01-01

    In this paper,a difference scheme for the periodic initial-boundary problem of the coupled KdV equation is given.The scheme keeps the first two conserved quantities which the differential equation possesses.The catch-ran iterative method is used to solve the difference equations.The numerical simulation exhibits the existence of two-soliton solutions.

  9. Parallel Interleaved VSCs: Influence of the PWM Scheme on the Design of the Coupled Inductor

    DEFF Research Database (Denmark)

    Gohil, Ghanshyamsinh Vijaysinh; Bede, Lorand; Maheshwari, Ram Krishan;

    2014-01-01

    -linkage in the CI is presented in this paper. The maximum flux density and the core losses, being the most important parameters for the CI design, are evaluated for continuous PWM and discontinuous pulsewidth modulation (DPWM) schemes. The effect of these PWM schemes on the design of the CI is discussed....... To limit the circulating current, magnetic coupling between the interleaved legs of the corresponding phase is provided by means of a Coupled Inductor (CI). The design of the CI is strongly influenced by the Pulsewidth Modulation (PWM) scheme used. The analytical model to evaluate the flux...

  10. Stable explicit coupling of the Yee scheme with a linear current model in fluctuating magnetized plasmas

    Energy Technology Data Exchange (ETDEWEB)

    Silva, Filipe da, E-mail: tanatos@ipfn.ist.utl.pt [Instituto de Plasmas e Fusão Nuclear, Instituto Superior Técnico, Universidade de Lisboa, 1049-001 Lisboa (Portugal); Pinto, Martin Campos, E-mail: campos@ann.jussieu.fr [CNRS, UMR 7598, Laboratoire Jacques-Louis Lions, F-75005, Paris (France); Sorbonne Universités, UPMC Univ Paris 06, UMR 7598, Laboratoire Jacques-Louis Lions, F-75005, Paris (France); Després, Bruno, E-mail: despres@ann.jussieu.fr [Sorbonne Universités, UPMC Univ Paris 06, UMR 7598, Laboratoire Jacques-Louis Lions, F-75005, Paris (France); CNRS, UMR 7598, Laboratoire Jacques-Louis Lions, F-75005, Paris (France); Heuraux, Stéphane, E-mail: stephane.heuraux@univ-lorraine.fr [Institut Jean Lamour, UMR 7198, CNRS – University Lorraine, Vandoeuvre (France)

    2015-08-15

    This work analyzes the stability of the Yee scheme for non-stationary Maxwell's equations coupled with a linear current model with density fluctuations. We show that the usual procedure may yield unstable scheme for physical situations that correspond to strongly magnetized plasmas in X-mode (TE) polarization. We propose to use first order clustered discretization of the vectorial product that gives back a stable coupling. We validate the schemes on some test cases representative of direct numerical simulations of X-mode in a magnetic fusion plasma including turbulence.

  11. Coupling Schemes for an n su(2) Spin System

    Science.gov (United States)

    Yamamura, M.; Providencia, C.; Providencia, J. D.; Tsue, Y.; Providencia, J. D., Jr.

    2004-12-01

    In the framework of the Schwinger boson representation for the su(2)-algebra, the closed form is derived for the total spin eigenstates which result from the coupling of n su(2)-spins. In order to demonstrate its usefulness, the orthogonal set for the so(5)-algebra, which is reduced to four su(2)-spin systems, is obtained.

  12. Scalar coupling evolution in a non-perturbative QCD resummation scheme

    Energy Technology Data Exchange (ETDEWEB)

    Gomez, J.D., E-mail: jgomez@ufabc.edu.br [Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, 09210-170, Santo André, SP (Brazil); Natale, A.A., E-mail: natale@ift.unesp.br [Centro de Ciências Naturais e Humanas, Universidade Federal do ABC, 09210-170, Santo André, SP (Brazil); Instituto de Física Teórica, UNESP, Rua Dr. Bento T. Ferraz, 271, Bloco II, 01140-070, São Paulo, SP (Brazil)

    2015-07-30

    We compute the Standard Model scalar coupling (λ) evolution in a particular QCD resummation scheme, where the QCD coupling becomes infrared finite due to the presence of a dynamically generated gluon mass, leading to the existence of a non-perturbative infrared fixed point. We discuss how this scheme can be fixed taking recourse to phenomenological considerations in the infrared region. The QCD β function associated to this non-perturbative coupling when introduced into the SM renormalization group equations increases the λ values at high energies.

  13. Application of partially-coupled hydro-mechanical schemes to multiphase flow problems

    Science.gov (United States)

    Tillner, Elena; Kempka, Thomas

    2016-04-01

    Utilization of subsurface reservoirs by fluid storage or production generally triggers pore pressure changes and volumetric strains in reservoirs and cap rocks. The assessment of hydro-mechanical effects can be undertaken using different process coupling strategies. The fully-coupled geomechanics and flow simulation, constituting a monolithic system of equations, is rarely applied for simulations involving multiphase fluid flow due to the high computational efforts required. Pseudo-coupled simulations are driven by static tabular data on porosity and permeability changes as function of pore pressure or mean stress, resulting in a rather limited flexibility when encountering complex subsurface utilization schedules and realistic geological settings. Partially-coupled hydro-mechanical simulations can be distinguished into one-way and iterative two-way coupled schemes, whereby the latter one is based on calculations of flow and geomechanics, taking into account the iterative exchange of coupling parameters between the two respective numerical simulators until convergence is achieved. In contrast, the one-way coupling scheme is determined by the provision of pore pressure changes calculated by the flow simulator to the geomechanical simulator neglecting any feedback. In the present study, partially-coupled two-way schemes are discussed in view of fully-coupled single-phase flow and geomechanics, and their applicability to multiphase flow simulations. For that purpose, we introduce a comparison study between the different coupling schemes, using selected benchmarks to identify the main requirements for the partially-coupled approach to converge with the numerical solution of the fully-coupled one.

  14. DINAMO: a coupled sequence alignment editor/molecular graphics tool for interactive homology modeling of proteins.

    Science.gov (United States)

    Hansen, M; Bentz, J; Baucom, A; Gregoret, L

    1998-01-01

    Gaining functional information about a novel protein is a universal problem in biomedical research. With the explosive growth of the protein sequence and structural databases, it is becoming increasingly common for researchers to attempt to build a three-dimensional model of their protein of interest in order to gain information about its structure and interactions with other molecules. The two most reliable methods for predicting the structure of a protein are homology modeling, in which the novel sequence is modeled on the known three-dimensional structure of a related protein, and fold recognition (threading), where the sequence is scored against a library of fold models, and the highest scoring model is selected. The sequence alignment to a known structure can be ambiguous, and human intervention is often required to optimize the model. We describe an interactive model building and assessment tool in which a sequence alignment editor is dynamically coupled to a molecular graphics display. By means of a set of assessment tools, the user may optimize his or her alignment to satisfy the known heuristics of protein structure. Adjustments to the sequence alignment made by the user are reflected in the displayed model by color and other visual cues. For instance, residues are colored by hydrophobicity in both the three-dimensional model and in the sequence alignment. This aids the user in identifying undesirable buried polar residues. Several different evaluation metrics may be selected including residue conservation, residue properties, and visualization of predicted secondary structure. These characteristics may be mapped to the model both singly and in combination. DINAMO is a Java-based tool that may be run either over the web or installed locally. Its modular architecture also allows Java-literate users to add plug-ins of their own design.

  15. Simulation of coupled flow and mechanical deformation using IMplicit Pressure-Displacement Explicit Saturation (IMPDES) scheme

    KAUST Repository

    El-Amin, Mohamed

    2012-01-01

    The problem of coupled structural deformation with two-phase flow in porous media is solved numerically using cellcentered finite difference (CCFD) method. In order to solve the system of governed partial differential equations, the implicit pressure explicit saturation (IMPES) scheme that governs flow equations is combined with the the implicit displacement scheme. The combined scheme may be called IMplicit Pressure-Displacement Explicit Saturation (IMPDES). The pressure distribution for each cell along the entire domain is given by the implicit difference equation. Also, the deformation equations are discretized implicitly. Using the obtained pressure, velocity is evaluated explicitly, while, using the upwind scheme, the saturation is obtained explicitly. Moreover, the stability analysis of the present scheme has been introduced and the stability condition is determined.

  16. Fast modulation scheme for a two laterally coupled laser diode array

    Energy Technology Data Exchange (ETDEWEB)

    Carpintero, G.; Lamela, H.; Leones, M.; Simmendinger, C.; Hess, O.

    2001-06-25

    The present letter reports a modulation scheme that takes advantage of the unique characteristics of a two laterally coupled laser diode (also known as twin stripe array) to overcome the limit on the modulation imposed by the laser{close_quote}s relaxation oscillation frequency. Through the use of the rate equation description of the device we uncover the device dynamics behind the modulation scheme generating 35 ps (full width at half maximum) laser pulses at 8 Gb/s modulation rate. Our scheme relies on the fast dynamics of the phase difference, controlled by means of the current injection on each stripe. {copyright} 2001 American Institute of Physics.

  17. Critical analysis of fragment-orbital DFT schemes for the calculation of electronic coupling values

    Energy Technology Data Exchange (ETDEWEB)

    Schober, Christoph; Reuter, Karsten; Oberhofer, Harald, E-mail: harald.oberhofer@ch.tum.de [Chair for Theoretical Chemistry, Technische Universität München, Lichtenbergstr. 4, D-85747 Garching (Germany)

    2016-02-07

    We present a critical analysis of the popular fragment-orbital density-functional theory (FO-DFT) scheme for the calculation of electronic coupling values. We discuss the characteristics of different possible formulations or “flavors” of the scheme which differ by the number of electrons in the calculation of the fragments and the construction of the Hamiltonian. In addition to two previously described variants based on neutral fragments, we present a third version taking a different route to the approximate diabatic state by explicitly considering charged fragments. In applying these FO-DFT flavors to the two molecular test sets HAB7 (electron transfer) and HAB11 (hole transfer), we find that our new scheme gives improved electronic couplings for HAB7 (−6.2% decrease in mean relative signed error) and greatly improved electronic couplings for HAB11 (−15.3% decrease in mean relative signed error). A systematic investigation of the influence of exact exchange on the electronic coupling values shows that the use of hybrid functionals in FO-DFT calculations improves the electronic couplings, giving values close to or even better than more sophisticated constrained DFT calculations. Comparing the accuracy and computational cost of each variant, we devise simple rules to choose the best possible flavor depending on the task. For accuracy, our new scheme with charged-fragment calculations performs best, while numerically more efficient at reasonable accuracy is the variant with neutral fragments.

  18. Critical analysis of fragment-orbital DFT schemes for the calculation of electronic coupling values.

    Science.gov (United States)

    Schober, Christoph; Reuter, Karsten; Oberhofer, Harald

    2016-02-07

    We present a critical analysis of the popular fragment-orbital density-functional theory (FO-DFT) scheme for the calculation of electronic coupling values. We discuss the characteristics of different possible formulations or "flavors" of the scheme which differ by the number of electrons in the calculation of the fragments and the construction of the Hamiltonian. In addition to two previously described variants based on neutral fragments, we present a third version taking a different route to the approximate diabatic state by explicitly considering charged fragments. In applying these FO-DFT flavors to the two molecular test sets HAB7 (electron transfer) and HAB11 (hole transfer), we find that our new scheme gives improved electronic couplings for HAB7 (-6.2% decrease in mean relative signed error) and greatly improved electronic couplings for HAB11 (-15.3% decrease in mean relative signed error). A systematic investigation of the influence of exact exchange on the electronic coupling values shows that the use of hybrid functionals in FO-DFT calculations improves the electronic couplings, giving values close to or even better than more sophisticated constrained DFT calculations. Comparing the accuracy and computational cost of each variant, we devise simple rules to choose the best possible flavor depending on the task. For accuracy, our new scheme with charged-fragment calculations performs best, while numerically more efficient at reasonable accuracy is the variant with neutral fragments.

  19. A new scheme for the running coupling constant in gauge theories using Wilson loops

    Energy Technology Data Exchange (ETDEWEB)

    Kurachi, Masafumi [Los Alamos National Laboratory; Bilgici, Erek [AUSTRIA; Flachi, Antonion [KYOTO UNIV; Itou, Etsuko [KOGAKUIN UNIV; David Lin, C J [NATIONAL CHIAO-TUNG UNIV; Matsufuru, Hideo [KEK; Ohki, Hiroshi [KYOTO UNIV; Onogi, Tetsuya [KYOTO UNIV; Yamazaki, Takeshi [UNIV OF TSUKUBA

    2009-01-01

    We propose a new renormalization scheme of the running coupling constant in general gauge theories defined by using the Wilson loops. The renormalized coupling constant is obtained from the Cretz ratio in lattice simulations and the corresponding perturbative coefficient at the leading order. The latter calculation is performed by adopting the zeta-function resummation techniques. We make a benchmark test of our scheme in quenched QCD with the plaquette gauge action. The running of the coupling constant is determined by applying the step scaling procedure. Using several methods to improve the statistical accuracy, we show that the running coupling constant can be determined in a wide range of energy scales with relatively small number of gauge configurations.

  20. Induced alignment and measurement of dipolar couplings of an SH2 domain through direct binding with filamentous phage

    Energy Technology Data Exchange (ETDEWEB)

    Dahlke Ojennus, Deanna; Mitton-Fry, Rachel M.; Wuttke, Deborah S. [University of Colorado, Department of Chemistry and Biochemistry (United States)

    1999-06-15

    Large residual {sup 15}N-{sup 1}H dipolar couplings have been measured in a Src homology II domain aligned at Pf1 bacteriophage concentrations an order of magnitude lower than used for induction of a similar degree of alignment of nucleic acids and highly acidic proteins. An increase in {sup 1} H and {sup 15}N protein linewidths and a decrease in T{sub 2} and T{sub 1}{rho} relaxation time constants implicates a binding interaction between the protein and phage as the mechanism of alignment. However, the associated increased linewidth does not preclude the accurate measurement of large dipolar couplings in the aligned protein. A good correlation is observed between measured dipolar couplings and predicted values based on the high resolution NMR structure of the SH2 domain. The observation of binding-induced protein alignment promises to broaden the scope of alignment techniques by extending their applicability to proteins that are able to interact weakly with the alignment medium.

  1. The fragment spin difference scheme for triplet-triplet energy transfer coupling.

    Science.gov (United States)

    You, Zhi-Qiang; Hsu, Chao-Ping

    2010-08-21

    To calculate the electronic couplings in both inter- and intramolecular triplet energy transfer (TET), we have developed the "fragment spin difference" (FSD) scheme. The FSD was a generalization from the "fragment charge difference" (FCD) method of Voityuk et al. [J. Chem. Phys. 117, 5607 (2002)] for electron transfer (ET) coupling. In FSD, the spin population difference was used in place of the charge difference in FCD. FSD is derived from the eigenstate energies and populations, and therefore the FSD couplings contain all contributions in the Hamiltonian as well as the potential overlap effect. In the present work, two series of molecules, all-trans-polyene oligomers and polycyclic aromatic hydrocarbons, were tested for intermolecular TET study. The TET coupling results are largely similar to those from the previously developed direct coupling scheme, with FSD being easier and more flexible in use. On the other hand, the Dexter's exchange integral value, a quantity that is often used as an approximate for the TET coupling, varies in a large range as compared to the corresponding TET coupling. To test the FSD for intramolecular TET, we have calculated the TET couplings between zinc(II)-porphyrin and free-base porphyrin separated by different numbers of p-phenyleneethynylene bridge units. Our estimated rate constants are consistent with experimentally measured TET rates. The FSD method can be used for both intermolecular and intramolecular TET, regardless of their symmetry. This general applicability is an improvement over most existing methodologies.

  2. The fragment spin difference scheme for triplet-triplet energy transfer coupling

    Science.gov (United States)

    You, Zhi-Qiang; Hsu, Chao-Ping

    2010-08-01

    To calculate the electronic couplings in both inter- and intramolecular triplet energy transfer (TET), we have developed the "fragment spin difference" (FSD) scheme. The FSD was a generalization from the "fragment charge difference" (FCD) method of Voityuk et al. [J. Chem. Phys. 117, 5607 (2002)] for electron transfer (ET) coupling. In FSD, the spin population difference was used in place of the charge difference in FCD. FSD is derived from the eigenstate energies and populations, and therefore the FSD couplings contain all contributions in the Hamiltonian as well as the potential overlap effect. In the present work, two series of molecules, all-trans-polyene oligomers and polycyclic aromatic hydrocarbons, were tested for intermolecular TET study. The TET coupling results are largely similar to those from the previously developed direct coupling scheme, with FSD being easier and more flexible in use. On the other hand, the Dexter's exchange integral value, a quantity that is often used as an approximate for the TET coupling, varies in a large range as compared to the corresponding TET coupling. To test the FSD for intramolecular TET, we have calculated the TET couplings between zinc(II)-porphyrin and free-base porphyrin separated by different numbers of p-phenyleneethynylene bridge units. Our estimated rate constants are consistent with experimentally measured TET rates. The FSD method can be used for both intermolecular and intramolecular TET, regardless of their symmetry. This general applicability is an improvement over most existing methodologies.

  3. Synchronization of Chaotic Storage-Ring Free-Electron Laser by Bi-Directional Coupling Scheme with the Coupling Strength Varied Periodically

    Institute of Scientific and Technical Information of China (English)

    HUANG Liang-Yu; LUO Xiao-Shu

    2006-01-01

    @@ We analyse the chaotic dynamics of storage-ring free-electron lasers and report a bi-directional coupled scheme with the coupling strength varied periodically to synchronize two chaotic storage-ring free-electron lasers.

  4. A new coupled computational method in conjunction with three-dimensional finite volume schemes for nonlinear coupled constitutive relations

    CERN Document Server

    Jiang, Zhongzheng; Zhao, Wenwen

    2016-01-01

    Non-equilibrium effects play a vital role in high-speed and rarefied gas flows and the accurate simulation of these flow regimes are far beyond the capability of near-local-equilibrium Navier-Stokes-Fourier equations. Eu proposed generalized hydrodynamic equations which are consistent with the laws of irreversible thermodynamics to solve this problem. Based on Eu's generalized hydrodynamics equations, a computational model, namely the nonlinear coupled constitutive relations(NCCR),was developed by R.S.Myong and applied successfully to one-dimensional shock wave structure and two-dimensional rarefied flows. In this paper, finite volume schemes, including LU-SGS time advance scheme, MUSCL interpolation and AUSMPW+ scheme, are fistly adopted to investigate NCCR model's validity and potential in three-dimensional complex hypersonic rarefied gas flows. Moreover, in order to solve the computational stability problems in 3D complex flows,a modified solution is developed for the NCCR model. Finally, the modified solu...

  5. Feedback control scheme of traffic jams based on the coupled map car-following model

    Science.gov (United States)

    Zhou, Tong; Sun, Di-Hua; Zhao, Min; Li, Hua-Min

    2013-09-01

    Based on the pioneering work of Konishi et al. [Phys. Rev. E (1999) 60 4000], a new feedback control scheme is presented to suppress traffic jams based on the coupled map car-following model under the open boundary condition. The effect of the safe headway on the traffic system is considered. According to the control theory, the condition under which traffic jams can be suppressed is analyzed. The results are compared with the previous results concerning congestion control. The simulations show that the suppression performance of our scheme on traffic jams is better than those of the previous schemes, although all the schemes can suppress traffic jams. The simulation results are consistent with theoretical analyses.

  6. Perturbative running of the twisted Yang-Mills coupling in the gradient flow scheme

    CERN Document Server

    Bribian, Eduardo I

    2016-01-01

    We report on our ongoing computation of the perturbative running of the Yang-Mills coupling using gradient flow techniques. In particular, we use the gradient flow method with twisted boundary conditions to perform a perturbative expansion of the expectation value of the Yang-Mills energy density up to fourth order in the coupling at finite flow time. We regularise the resulting integrals using dimensional regularisation, and reproduce the universal coefficient of the 1/{\\epsilon} term in the relation between bare and renormalised couplings. The computation of the finite part leading to a determination of the {\\Lambda} parameter in this scheme is underway.

  7. Alignment, vibronic level splitting, and coherent coupling effects on the pump-probe polarization anisotropy.

    Science.gov (United States)

    Smith, Eric R; Jonas, David M

    2011-04-28

    The pump-probe polarization anisotropy is computed for molecules with a nondegenerate ground state, two degenerate or nearly degenerate excited states with perpendicular transition dipoles, and no resonant excited-state absorption. Including finite pulse effects, the initial polarization anisotropy at zero pump-probe delay is predicted to be r(0) = 3/10 with coherent excitation. During pulse overlap, it is shown that the four-wave mixing classification of signal pathways as ground or excited state is not useful for pump-probe signals. Therefore, a reclassification useful for pump-probe experiments is proposed, and the coherent anisotropy is discussed in terms of a more general transition dipole and molecular axis alignment instead of experiment-dependent ground- versus excited-state pathways. Although coherent excitation enhances alignment of the transition dipole, the molecular axes are less aligned than for a single dipole transition, lowering the initial anisotropy. As the splitting between excited states increases beyond the laser bandwidth and absorption line width, the initial anisotropy increases from 3/10 to 4/10. Asymmetric vibrational coordinates that lift the degeneracy control the electronic energy gap and off-diagonal coupling between electronic states. These vibrations dephase coherence and equilibrate the populations of the (nearly) degenerate states, causing the anisotropy to decay (possibly with oscillations) to 1/10. Small amounts of asymmetric inhomogeneity (2 cm(-1)) cause rapid (130 fs) suppression of both vibrational and electronic anisotropy beats on the excited state, but not vibrational beats on the ground electronic state. Recent measurements of conical intersection dynamics in a silicon napthalocyanine revealed anisotropic quantum beats that had to be assigned to asymmetric vibrations on the ground electronic state only [Farrow, D. A.; J. Chem. Phys. 2008, 128, 144510]. Small environmental asymmetries likely explain the observed absence

  8. A family of compact high order coupled time-space unconditionally stable vertical advection schemes

    Science.gov (United States)

    Lemarié, Florian; Debreu, Laurent

    2016-04-01

    Recent papers by Shchepetkin (2015) and Lemarié et al. (2015) have emphasized that the time-step of an oceanic model with an Eulerian vertical coordinate and an explicit time-stepping scheme is very often restricted by vertical advection in a few hot spots (i.e. most of the grid points are integrated with small Courant numbers, compared to the Courant-Friedrichs-Lewy (CFL) condition, except just few spots where numerical instability of the explicit scheme occurs first). The consequence is that the numerics for vertical advection must have good stability properties while being robust to changes in Courant number in terms of accuracy. An other constraint for oceanic models is the strict control of numerical mixing imposed by the highly adiabatic nature of the oceanic interior (i.e. mixing must be very small in the vertical direction below the boundary layer). We examine in this talk the possibility of mitigating vertical Courant-Friedrichs-Lewy (CFL) restriction, while avoiding numerical inaccuracies associated with standard implicit advection schemes (i.e. large sensitivity of the solution on Courant number, large phase delay, and possibly excess of numerical damping with unphysical orientation). Most regional oceanic models have been successfully using fourth order compact schemes for vertical advection. In this talk we present a new general framework to derive generic expressions for (one-step) coupled time and space high order compact schemes (see Daru & Tenaud (2004) for a thorough description of coupled time and space schemes). Among other properties, we show that those schemes are unconditionally stable and have very good accuracy properties even for large Courant numbers while having a very reasonable computational cost.

  9. A Self-synchronizing Stream Encryption Scheme Based on One-Dimensional Coupled Map Lattices

    Institute of Scientific and Technical Information of China (English)

    MA Hui; ZHU Kai-En; CHEN Tian-Lun

    2007-01-01

    We present a self-synchronizing stream encryption scheme based on one-dimensional coupled map lattices which is introduced as a model with the essential features of spatiotemporal chaos,and of great complexity and diffusion capability of the little disturbance in the initial condition.To evaluate the scheme,a series of statistical tests are employed,and the results show good random-look nature of the ciphertext.Furthermore,we apply our algorithm to encrypt a grey-scale image to show the key sensitivity.

  10. The DSUBm approximation scheme for the coupled cluster method and applications to quantum magnets

    Directory of Open Access Journals (Sweden)

    R.F. Bishop

    2009-01-01

    Full Text Available A new approximate scheme, DSUBm, is described for the coupled cluster method. We apply it to two well-studied (spin-1/2 Heisenberg antiferromagnet spin-lattice models, namely: the XXZ and the XY models on the square lattice in two dimensions. Results are obtained in each case for the ground-state energy, the sublattice magnetization and the quantum critical point. They are in good agreement with those from such alternative methods as spin-wave theory, series expansions, exact diagonalization techniques, quantum Monte Carlo methods and those from the CCM using the LSUBm scheme.

  11. A stable scheme for computation of coupled transport and equilibrium equations in tokamaks

    Science.gov (United States)

    Fable, E.; Angioni, C.; Ivanov, A. A.; Lackner, K.; Maj, O.; Yu, S.; Medvedev; Pautasso, G.; Pereverzev, G. V.

    2013-03-01

    The coupled system consisting of 1D radial transport equations and the quasi-static 2D magnetic equilibrium equation for axisymmetric systems (tokamaks) is known to be prone to numerical instabilities, either due to propagation of numerical errors in the iteration process, or due to the choice of the numerical scheme itself. In this paper, a possible origin of these instabilities, specifically associated with the latter condition, is discussed and an approach is chosen, which is shown to have good accuracy and stability properties. This scheme is proposed to be used within those codes for which the poloidal flux ψ is the quantity solved for in the current diffusion equation. Mathematical arguments are used to study the convergence properties of the proposed scheme.

  12. A Coupled Computational Scheme on Thermal and Phase Structures of Subducting Slabs

    Institute of Scientific and Technical Information of China (English)

    JING Zhi-Cheng; MNG Jie-Yuan

    2001-01-01

    The thermodynamic processes undergone by olivine, the chief mineral of subducting slabs, are important in studying the mechanisms of deep-focus earthquakes and the interaction between slabs and the surrounding mantle. We propose a modified coupling scheme to calculate the thermal and phase structures of slabs, which presents a high computational' accuracy at an accessible CPU expense. Using the new code of computation, we have calculated the thermal and phase structures of the Kurile subduction zone.

  13. Probing motions between equivalent RNA domains using magnetic field induced residual dipolar couplings: accounting for correlations between motions and alignment.

    Science.gov (United States)

    Zhang, Qi; Throolin, Rachel; Pitt, Stephen W; Serganov, Alexander; Al-Hashimi, Hashim M

    2003-09-03

    Approaches developed thus for extracting structural and dynamical information from RDCs have rested on the assumption that motions do not affect molecular alignment. However, it is well established that molecular alignment in ordered media is dependent on conformation, and slowly interconverting conformational substates may exhibit different alignment properties. Neglecting these correlation effects can lead to aberrations in the structural and dynamical analysis of RDCs and diminish the utility of RDCs in probing motions between domains having similar alignment propensities. Here, we introduce a new approach based on measurement of magnetic field induced residual dipolar couplings in nucleic acids which can explicitly take into account such correlations and demonstrate measurements of motions between two "magnetically equivalent" domains in the transactivation response element (TAR) RNA.

  14. The Effect of Coupled Dark Energy on the Alignment between Dark Matter and Galaxy Distributions in Clusters

    CERN Document Server

    Baldi, Marco; Maccio, Andrea V

    2011-01-01

    We investigate the effects of a coupled Dark Energy (cDE) scalar field on the alignment between satellites and matter distributions in galaxy clusters. Using high-resolution N-body simulations for LCDM and cDE cosmological models, we compute the probability density distribution for the alignment angle between the satellite galaxies and underlying matter distributions, finding a difference between the two scenarios. With respect to LCDM, in cDE cosmologies the satellite galaxies are less preferentially located along the major axis of the matter distribution, possibly reducing the tension with obersevational data. A physical explanation is that the coupling between dark matter and dark energy acts as an additional tidal force on the satellite galaxies diminishing the alignments between their distribution and the matter one. Through a likelihood ratio test based on the generalized chi square statistics, the null hypothesis that the two probability distributions come from the same parent population is rejected at...

  15. Current steering detection scheme of three terminal antenna-coupled terahertz field effect transistor detectors.

    Science.gov (United States)

    Földesy, Péter

    2013-08-01

    An antenna-coupled field effect transistor (FET) as a plasma wave terahertz detector is used with the current steering to record separately the gate-source and gate-drain photoresponses and their phase sensitive combination. This method is based on the observation that the plasmon-terminal coupling is cut off in saturation, resulting in only one-sided sensitivity. A polarimetric example is presented with intensity and polarization angle reconstruction using a single three-terminal antenna-coupled Si-metal-oxide semiconductor FET (MOSFET). The technique is applicable to various detection schemes and technologies (high electron mobility transistors and GaAs-, GaN-, and Si-MOSFETs), and other application possibilities are discussed.

  16. A Nanotechnology-Ready Computing Scheme based on a Weakly Coupled Oscillator Network

    Science.gov (United States)

    Vodenicarevic, Damir; Locatelli, Nicolas; Abreu Araujo, Flavio; Grollier, Julie; Querlioz, Damien

    2017-01-01

    With conventional transistor technologies reaching their limits, alternative computing schemes based on novel technologies are currently gaining considerable interest. Notably, promising computing approaches have proposed to leverage the complex dynamics emerging in networks of coupled oscillators based on nanotechnologies. The physical implementation of such architectures remains a true challenge, however, as most proposed ideas are not robust to nanotechnology devices’ non-idealities. In this work, we propose and investigate the implementation of an oscillator-based architecture, which can be used to carry out pattern recognition tasks, and which is tailored to the specificities of nanotechnologies. This scheme relies on a weak coupling between oscillators, and does not require a fine tuning of the coupling values. After evaluating its reliability under the severe constraints associated to nanotechnologies, we explore the scalability of such an architecture, suggesting its potential to realize pattern recognition tasks using limited resources. We show that it is robust to issues like noise, variability and oscillator non-linearity. Defining network optimization design rules, we show that nano-oscillator networks could be used for efficient cognitive processing. PMID:28322262

  17. A Nanotechnology-Ready Computing Scheme based on a Weakly Coupled Oscillator Network

    Science.gov (United States)

    Vodenicarevic, Damir; Locatelli, Nicolas; Abreu Araujo, Flavio; Grollier, Julie; Querlioz, Damien

    2017-03-01

    With conventional transistor technologies reaching their limits, alternative computing schemes based on novel technologies are currently gaining considerable interest. Notably, promising computing approaches have proposed to leverage the complex dynamics emerging in networks of coupled oscillators based on nanotechnologies. The physical implementation of such architectures remains a true challenge, however, as most proposed ideas are not robust to nanotechnology devices’ non-idealities. In this work, we propose and investigate the implementation of an oscillator-based architecture, which can be used to carry out pattern recognition tasks, and which is tailored to the specificities of nanotechnologies. This scheme relies on a weak coupling between oscillators, and does not require a fine tuning of the coupling values. After evaluating its reliability under the severe constraints associated to nanotechnologies, we explore the scalability of such an architecture, suggesting its potential to realize pattern recognition tasks using limited resources. We show that it is robust to issues like noise, variability and oscillator non-linearity. Defining network optimization design rules, we show that nano-oscillator networks could be used for efficient cognitive processing.

  18. A Theoretical Scheme for Entanglement Transfer under Intensity-Dependent Couplings

    Institute of Scientific and Technical Information of China (English)

    XIONG Heng-Na; GUO Hong

    2007-01-01

    We consider a theoretical scheme for entanglement transfer between a two-mode squeezed vacuum field and two initially separable atoms through intensity-dependent couplings. We find that the entanglement transfer between the field and the atoms has an exact period for any given squeezing. We also find that the maximum achievable entanglement of the atomic subsystem is a simple increasing function of r. For sufficiently large squeezing parameter r, it is possible for the atoms to be entangled into a Bell state at half the periodic time points.

  19. Establishing Alignment in Aphasia Couples Therapy in a Woman with Wernicke's Aphasia: A Case Study

    Science.gov (United States)

    Boles, Larry

    2015-01-01

    Alignment refers to the interactive use of similar words to accomplish a linguistic and cognitive "common ground" in conversations. Alignment is thought to be unconscious, relying on priming mechanisms. This occurs uniquely in conversational contexts and has been shown in choices of words, grammatical constructions, and even indirect…

  20. Variational approach to low-frequency kinetic-MHD in the current coupling scheme

    Science.gov (United States)

    Burby, Joshua W.; Tronci, Cesare

    2017-04-01

    Hybrid kinetic-MHD models describe the interaction of an MHD bulk fluid with an ensemble of hot particles, which obeys a kinetic equation. In this work we apply Hamilton’s variational principle to formulate new current-coupling kinetic-MHD models in the low-frequency approximation (i.e. large Larmor frequency limit). More particularly, we formulate current-coupling schemes, in which energetic particle dynamics are expressed in either guiding center or gyrocenter coordinates. When guiding center theory is used to model the hot particles, we show how energy conservation requires corrections to the standard magnetization term. On the other hand, charge and momentum conservation in gyrokinetic-MHD lead to extra terms in the usual definition of the hot current density as well as modifications to conventional gyrocenter dynamics. All these new features arise naturally from the underlying variational structure of the proposed models.

  1. Variational approach to low-frequency kinetic-MHD in the current coupling scheme

    CERN Document Server

    Burby, J W

    2016-01-01

    Hybrid kinetic-MHD models describe the interaction of an MHD bulk fluid with an ensemble of hot particles, which is described by a kinetic equation. When the Vlasov description is adopted for the energetic particles, different Vlasov-MHD models have been shown to lack an exact energy balance, which was recently recovered by the introduction of non-inertial force terms in the kinetic equation. These force terms arise from fundamental approaches based on Hamiltonian and variational methods. In this work we apply Hamilton's variational principle to formulate new current-coupling kinetic-MHD models in the low-frequency approximation (i.e. large Larmor frequency limit). More particularly, we formulate current-coupling hybrid schemes, in which energetic particle dynamics are expressed in either guiding-center or gyrocenter coordinates.

  2. Variational approach to low-frequency kinetic-MHD in the current-coupling scheme

    Science.gov (United States)

    Tronci, Cesare; Burby, Joshua

    2016-10-01

    Hybrid kinetic-MHD models describe the interaction of an MHD bulk fluid with an ensemble of hot particles, which is described by a kinetic equation. When the Vlasov description is adopted for the energetic particles, different Vlasov-MHD models have been shown to lack an exact energy balance, unless non-inertial force terms are inserted in the kinetic equation. These force terms arise from fundamental approaches based on Hamiltonian and variational methods. In this work we apply Hamilton's variational principle to formulate new current-coupling kinetic-MHD models in the low-frequency approximation (i.e. large Larmor frequency limit). More particularly, we formulate current-coupling hybrid schemes, in which energetic particle dynamics are expressed in either guiding-center or gyrocenter coordinates. Financial support by the Leverhulme Trust Research Project Grant No. 2014-112 is greatly acknowledged.

  3. Research on an azimuth serf-alignment scheme of inertial platform%惯性平台方位自对准方案研究

    Institute of Scientific and Technical Information of China (English)

    张长虹

    2012-01-01

    An azimuth self-alignment scheme of inertial platform is described, which is divided into two stages of coarse alignment and fine alignment. The coarse alignment adopts a one-position computation compass, which can quickly distinguish error angles between azimuth axis of platform and true north, and can control plalform' s coor- dinate system approximately to north-seeking azimuth system by means of loop locking. The fine alignment adopts a two-position open-loop drift testing, which can exactly estimate drift parameters of platform in east axis as well as drift parameters of gyroscope, and can further estimate azimuth angle errors of platform by the computation compass so as to carry out precise azimuth alignment of the inertial platform. Theory deduction and error analysis are done for the above scheme and a self-aligument scheme flowchart is given.%提出了一种惯性平台方位自对准方案,该方案分粗对准和精对准两个阶段。粗对准采用单位置计算罗经法,快速识别平台方位轴与真北方向的误差角,并通过锁定回路控制平台坐标系近似为指北方位系统;精对准采用双位置开路测漂方法,进一步精确估计平台东向轴漂移参数和陀螺仪漂移参数,进而采用计算罗经法计算出平台方位误差角,以实现惯性平台方位的精确对准。本文对上述方案进行了理论推导和误差分析,并给出了自对准方案工作流程。

  4. Quantitative conformational analysis of the core region of N-glycans using residual dipolar couplings, aqueous molecular dynamics, and steric alignment

    Energy Technology Data Exchange (ETDEWEB)

    Almond, Andrew; Duus, Jens O. [Carlsberg Laboratory (Denmark)

    2001-08-15

    A method is described for quantitatively investigating the dynamic conformation of small oligosaccharides containing an {alpha}(1{sup {yields}}6) linkage. It was applied to the oligosaccharide Man-{alpha}(1{sup {yields}}3) {l_brace}Man-{alpha} (1{sup {yields}}6){r_brace}Man-{alpha}-O-Me, which is a core region frequently observed in N-linked glycans. The approach tests an aqueous molecular dynamics simulation, capable of predicting microscopic dynamics, against experimental residual dipolar couplings, by assuming that alignment is caused purely by steric hindrance. The experimental constraints were heteronuclear and homonuclear residual dipolar couplings, and in particular those within the {alpha}(1{sup {yields}}6) linkage itself. Powerful spin-state-selective pulse sequences and editing schemes were used to obtain the most relevant couplings for testing the model. Molecular dynamics simulations in water over a period of 50 ns were not able to predict the correct rotamer population at the {alpha}(1{sup {yields}}6) linkage to agree with the experimental data. However, this sampling problem could be corrected using a simple maximum likelihood optimisation, indicating that the simulation was modelling local dynamics correctly. The maximum likelihood prediction of the residual dipolar couplings was found to be an almost equal population of the gg and gt rotamer conformations at the {alpha}(1{sup {yields}}6) linkage, and the tg conformation was predicted to be unstable and unpopulated in aqueous solution. In this case all twelve measured residual dipolar couplings could be satisfied. This conformer population could also be used to make predictions of scalar couplings with the use of a previously derived empirical equation, and is qualitatively in agreement with previous predictions based on NMR, X-ray crystallography and optical data.

  5. AN H∞ FUZZY TRACKING CONTROL SCHEME FOR AFFINE COUPLED SPATIO-TEMPORAL CHAOS

    Institute of Scientific and Technical Information of China (English)

    Dou Chunxia; Zhang Shuqing

    2005-01-01

    Due to the interactions among coupled spatio-temporal subsystems and the constant bias term of affine chaos, it is difficult to achieve tracking control for the affine coupled spatiotemporal chaos. However, every subsystem of the affine coupled spatio-temporal chaos can be approximated by a set of fuzzy models; every fuzzy model represents a linearized model of the subsystem corresponding to the operating point of the controlled system. Because the consequent parts of the fuzzy models have a constant bias term, it is very difficult to achieve tracking control for the affine system. Based on these fuzzy models, considering the affine constant bias term, an H∞ fuzzy tracking control scheme is proposed. A linear matrix inequality is employed to represent the feedback controller, and parameters of the controller are achieved by convex optimization techniques. The tracking control for the affine coupled spatio-temporal chaos is achieved, and the stability of the system is also guaranteed. The tracking performances are testified by simulation examples.

  6. A coupled well-balanced and random sampling scheme for computing bubble oscillations*

    Directory of Open Access Journals (Sweden)

    Jung Jonathan

    2012-04-01

    Full Text Available We propose a finite volume scheme to study the oscillations of a spherical bubble of gas in a liquid phase. Spherical symmetry implies a geometric source term in the Euler equations. Our scheme satisfies the well-balanced property. It is based on the VFRoe approach. In order to avoid spurious pressure oscillations, the well-balanced approach is coupled with an ALE (Arbitrary Lagrangian Eulerian technique at the interface and a random sampling remap. Nous proposons un schéma de volumes finis pour étudier les oscillations d’une bulle sphérique de gaz dans l’eau. La symétrie sphérique fait apparaitre un terme source géométrique dans les équations d’Euler. Notre schéma est basé sur une approche VFRoe et préserve les états stationnaires. Pour éviter les oscillations de pression, l’approche well-balanced est couplée avec une approche ALE (Arbitrary Lagrangian Eulerian, et une étape de projection basée sur un échantillonage aléatoire.

  7. Couplings of quarks in the Partially Aligned 2HDM with a four-zero texture Yukawa matrix

    CERN Document Server

    Hernández-Sánchez, J; Noriega-Papaqui, R; Rosado, A

    2011-01-01

    The Two Higgs Doublets Model (2HDM) has provided a very useful way to describe a minimal extension of the scalar sector of the Standard Model. In this work, it is shown a scheme that we call Partial Aligned Two Higgs Doublet Model (PA-2HDM) which allows a description of the distinct versions of the 2HDM in a simple way, including those with flavor symmetries. In addition, it is shown a method to diagonalize Yukawa matrices of four-zero texture coming from the 2HDM-III.

  8. Accelerating Smith-Waterman Alignment for Protein Database Search Using Frequency Distance Filtration Scheme Based on CPU-GPU Collaborative System.

    Science.gov (United States)

    Liu, Yu; Hong, Yang; Lin, Chun-Yuan; Hung, Che-Lun

    2015-01-01

    The Smith-Waterman (SW) algorithm has been widely utilized for searching biological sequence databases in bioinformatics. Recently, several works have adopted the graphic card with Graphic Processing Units (GPUs) and their associated CUDA model to enhance the performance of SW computations. However, these works mainly focused on the protein database search by using the intertask parallelization technique, and only using the GPU capability to do the SW computations one by one. Hence, in this paper, we will propose an efficient SW alignment method, called CUDA-SWfr, for the protein database search by using the intratask parallelization technique based on a CPU-GPU collaborative system. Before doing the SW computations on GPU, a procedure is applied on CPU by using the frequency distance filtration scheme (FDFS) to eliminate the unnecessary alignments. The experimental results indicate that CUDA-SWfr runs 9.6 times and 96 times faster than the CPU-based SW method without and with FDFS, respectively.

  9. Transition among synchronous schemes in coupled nonidentical multiple time delay systems

    Energy Technology Data Exchange (ETDEWEB)

    Thang Manh Hoang [Department of Electronics and Informatics, Faculty of Electronics and Telecommunications, Hanoi University of Technology, 1 Dai Co Viet, Hanoi (Viet Nam)], E-mail: hmt@mail.hut.edu.vn

    2009-10-30

    We present the transition among possible synchronous schemes in coupled nonidentical multiple time delay systems, i.e., lag, projective-lag, complete, anticipating and projective-anticipating synchronization. The number of nonlinear transforms in the master's equation can be different from that in slave's, and nonlinear transforms can be in various forms. The driving signal is the sum of nonlinearly transformed components of delayed state variable. Moreover, the equation representing for driving signal is constructed exactly so that the difference between the master's and slave's structures is complemented. The sufficient condition for synchronization is considered by the Krasovskii-Lyapunov theory. The specific examples will demonstrate and verify the effectiveness of the proposed models.

  10. PSO-tuned PID controller for coupled tank system via priority-based fitness scheme

    Science.gov (United States)

    Jaafar, Hazriq Izzuan; Hussien, Sharifah Yuslinda Syed; Selamat, Nur Asmiza; Abidin, Amar Faiz Zainal; Aras, Mohd Shahrieel Mohd; Nasir, Mohamad Na'im Mohd; Bohari, Zul Hasrizal

    2015-05-01

    The industrial applications of Coupled Tank System (CTS) are widely used especially in chemical process industries. The overall process is require liquids to be pumped, stored in the tank and pumped again to another tank. Nevertheless, the level of liquid in tank need to be controlled and flow between two tanks must be regulated. This paper presents development of an optimal PID controller for controlling the desired liquid level of the CTS. Two method of Particle Swarm Optimization (PSO) algorithm will be tested in optimizing the PID controller parameters. These two methods of PSO are standard Particle Swarm Optimization (PSO) and Priority-based Fitness Scheme in Particle Swarm Optimization (PFPSO). Simulation is conducted within Matlab environment to verify the performance of the system in terms of settling time (Ts), steady state error (SSE) and overshoot (OS). It has been demonstrated that implementation of PSO via Priority-based Fitness Scheme (PFPSO) for this system is potential technique to control the desired liquid level and improve the system performances compared with standard PSO.

  11. A coupled model tree genetic algorithm scheme for flow and water quality predictions in watersheds

    Science.gov (United States)

    Preis, Ami; Ostfeld, Avi

    2008-02-01

    SummaryThe rapid advance in information processing systems along with the increasing data availability have directed research towards the development of intelligent systems that evolve models of natural phenomena automatically. This is the discipline of data driven modeling which is the study of algorithms that improve automatically through experience. Applications of data driven modeling range from data mining schemes that discover general rules in large data sets, to information filtering systems that automatically learn users' interests. This study presents a data driven modeling algorithm for flow and water quality load predictions in watersheds. The methodology is comprised of a coupled model tree-genetic algorithm scheme. The model tree predicts flow and water quality constituents while the genetic algorithm is employed for calibrating the model tree parameters. The methodology is demonstrated through base runs and sensitivity analysis for daily flow and water quality load predictions on a watershed in northern Israel. The method produced close fits in most cases, but was limited in estimating the peak flows and water quality loads.

  12. Scalar correlator, Higgs decay into quarks, and scheme variations of the QCD coupling

    CERN Document Server

    Jamin, Matthias

    2016-01-01

    In this work, the perturbative QCD series of the scalar correlation function $\\Psi(s)$ is investigated. Besides ${\\rm Im}\\Psi(s)$, which is relevant for Higgs decay into quarks, two other physical correlators, $\\Psi^{''}(s)$ and $D^L(s)$, have been employed in QCD applications like quark mass determinations or hadronic $\\tau$ decays. $D^L(s)$ suffers from large higher-order corrections and, by resorting to the large-$\\beta_0$ approximation, it is shown that this is related to a spurious renormalon ambiguity at $u=1$. Hence, this correlator should be avoided in phenomenological analyses. Moreover, it turns out advantageous to express the quark mass factor, introduced to make the scalar current renormalisation group invariant, in terms of the renormalisation invariant quark mass $\\widehat m_q$. To further study the behaviour of the perturbative expansion, we introduce a QCD coupling $\\widehat\\alpha_s$, whose running is explicitly renormalisation scheme independent. The scheme dependence of $\\widehat\\alpha_s$ is...

  13. Modified coupled map car-following model and its delayed feedback control scheme

    Institute of Scientific and Technical Information of China (English)

    Ge Hong-Xia

    2011-01-01

    A modified coupled map car-following model is proposed,in which two successive vehicle headways in front of the considering vehicle is incorporated into the optimal velocity function. The steady state under certain conditions is obtained. An error system around the steady state is studied further. Moreover,the condition for the state having no traffic jam is derived. A new control scheme is presented to suppress the traffic jam in the modified coupled map car-following model under the open boundary. A control signal including the velocity differences between the following and the considering vehicles,and between the preceding and the considering vehicles is used. The condition under which the traffic jam can be well suppressed is analysed. The results are compared with that presented by Konishi et al. (the KKH model). The simulation results show that the temporal behaviour obtained in our model is better than that in the KKH model. The simulation results are in good agreement with the theoretical analysis.

  14. Modified coupled map car-following model and its delayed feedback control scheme

    Science.gov (United States)

    Ge, Hong-Xia

    2011-09-01

    A modified coupled map car-following model is proposed, in which two successive vehicle headways in front of the considering vehicle is incorporated into the optimal velocity function. The steady state under certain conditions is obtained. An error system around the steady state is studied further. Moreover, the condition for the state having no traffic jam is derived. A new control scheme is presented to suppress the traffic jam in the modified coupled map car-following model under the open boundary. A control signal including the velocity differences between the following and the considering vehicles, and between the preceding and the considering vehicles is used. The condition under which the traffic jam can be well suppressed is analysed. The results are compared with that presented by Konishi et al. (the KKH model). The simulation results show that the temporal behaviour obtained in our model is better than that in the KKH model. The simulation results are in good agreement with the theoretical analysis.

  15. A parallel finite element scheme for thermo-hydro-mechanical (THM) coupled problems in porous media

    Science.gov (United States)

    Wang, Wenqing; Kosakowski, Georg; Kolditz, Olaf

    2009-08-01

    Many applied problems in geoscience require knowledge about complex interactions between multiple physical and chemical processes in the sub-surface. As a direct experimental investigation is often not possible, numerical simulation is a common approach. The numerical analysis of coupled thermo-hydro-mechanical (THM) problems is computationally very expensive, and therefore the applicability of existing codes is still limited to simplified problems. In this paper we present a novel implementation of a parallel finite element method (FEM) for the numerical analysis of coupled THM problems in porous media. The computational task of the FEM is partitioned into sub-tasks by a priori domain decomposition. The sub-tasks are assigned to the CPU nodes concurrently. Parallelization is achieved by simultaneously establishing the sub-domain mesh topology, synchronously assembling linear equation systems in sub-domains and obtaining the overall solution with a sub-domain linear solver (parallel BiCGStab method with Jacobi pre-conditioner). The present parallelization method is implemented in an object-oriented way using MPI for inter-processor communication. The parallel code was successfully tested with a 2-D example from the international DECOVALEX benchmarking project. The achieved speed-up for a 3-D extension of the test example on different computers demonstrates the advantage of the present parallel scheme.

  16. 提高MIMO信道BER性能的干扰对齐方案%Interference Alignment Scheme for Improving BER Performance of MIMO Channel

    Institute of Scientific and Technical Information of China (English)

    周强; 吴玉成

    2012-01-01

    To improve the Bit Error Rate(BER) performance of Multi Input Multi Output(MIMQ) X channel, this paper proposes an Interference Alignment(IA) scheme. It transmits data symbols according to Alamouti scheme at senders, and changes the operation mode of reconfigurable antennas at receivers. The final equivalent channel matrix is orthogonal, thus interference can be eliminated through matrix operation, and low complexity Partial Interference Cancellation(PIC) group decoding can be employed. Simulation results proves the validity of the scheme.%为提高多输入多输出(MIMO)X信道的比特误码率(BER)性能,提出一种干扰对齐方案.在发送端将数据按照Alamouti编码方案重复发送,在接收端通过重新配置天线工作模式改变信道系数,构成具有正交结构的等效信道矩阵,通过矩阵运算消除干扰,并采用低复杂度的PIC群译码算法进行译码.仿真结果验证了该方案的有效性.

  17. Polymer waveguides self-organized by two-photon photochemistry for self-aligned optical couplings with wide misalignment tolerances

    Science.gov (United States)

    Yoshimura, Tetsuzo; Takeda, Daisuke; Sato, Takuya; Kinugasa, Yoshihiko; Nawata, Hideyuki

    2016-03-01

    Self-organized optical waveguides formed in a photopolymer using two-photon photochemistry is proposed for self-aligned optical couplings involving nano-scale optical devices with wide tolerances in lateral misalignments. Simulations based on the finite-difference time-domain method revealed that on introducing a 400-nm write beam and a 780-nm write beam into the two-photon photopolymer respectively from two 600-nm-wide waveguides facing each other with 32 μm gap a self-aligned coupling waveguide called a two-photon self-organized lightwave network (SOLNET) is formed between the two waveguides. The lateral misalignment tolerance was found to be 3000 nm, which is five times larger than the misalignment limit of ~600 nm in waveguides formed by conventional one-photon photochemistry. Preliminary experiments demonstrated that the two-photon SOLNETs are formed between multimode optical fibers by introducing a 448-nm write beam and a 780-nm (or 856-nm) write beam from the fibers into a photosensitive organic/inorganic hybrid material, SUNCONNECT®, with doped camphorquinone (or biacetyl).

  18. Uncertainty Propagation and Quantification using Constrained Coupled Adaptive Forward-Inverse Schemes: Theory and Applications

    Science.gov (United States)

    Ryerson, F. J.; Ezzedine, S. M.; Antoun, T.

    2013-12-01

    equation for the distribution of k is solved, provided that Cauchy data are appropriately assigned. In the next stage, only a limited number of passive measurements are provided. In this case, the forward and inverse PDEs are solved simultaneously. This is accomplished by adding regularization terms and filtering the pressure gradients in the inverse problem. Both the forward and the inverse problem are either simultaneously or sequentially coupled and solved using implicit schemes, adaptive mesh refinement, Galerkin finite elements. The final case arises when P, k, and Q data only exist at producing wells. This exceedingly ill posed problem calls for additional constraints on the forward-inverse coupling to insure that the production rates are satisfied at the desired locations. Results from all three cases are presented demonstrating stability and accuracy of the proposed approach and, more importantly, providing some insights into the consequences of data under sampling, uncertainty propagation and quantification. We illustrate the advantages of this novel approach over the common UQ forward drivers on several subsurface energy problems in either porous or fractured or/and faulted reservoirs. This work performed under the auspices of the U.S. Department of Energy by Lawrence Livermore National Laboratory under Contract DE-AC52-07NA27344.

  19. A Chaos-based Image Encryption Scheme Using 3D Skew Tent Map and Coupled Map Lattice

    Directory of Open Access Journals (Sweden)

    Ruisong Ye

    2012-02-01

    Full Text Available This paper proposes a chaos-based image encryption scheme where one 3D skew tent map with three control parameters is utilized to generate chaotic orbits applied to scramble the pixel positions while one coupled map lattice is employed to yield random gray value sequences to change the gray values so as to enhance the security. Experimental results have been carried out with detailed analysis to demonstrate that the proposed image encryption scheme possesses large key space to resist brute-force attack and possesses good statistical properties to frustrate statistical analysis attacks. Experiments are also performed to illustrate the robustness against malicious attacks like cropping, noising, JPEG compression.

  20. Pair-eigenstates and mutual alignment of coupled molecular rotors in a magnetic field

    CERN Document Server

    Sharma, Ketan

    2016-01-01

    We examine the rotational states of a pair of polar $^2\\Sigma$ molecules subject to a uniform magnetic field. The electric dipole-dipole interaction between the molecules creates entangled pair-eigenstates of two types. In one type, the Zeeman interaction between the inherently paramagnetic molecules and the magnetic field destroys the entanglement of the pair-eigenstates, whereas in the other type it does not. The pair-eigenstates exhibit numerous intersections, which become avoided for pair-eigenstates comprised of individual states that meet the selection rules $\\Delta J_{i}=0,\\pm 1$, $\\Delta N_{i}=0,\\pm 2$, and $\\Delta M_{i}=0,\\pm 1$ imposed by the electric dipole-dipole operator. Here $J_{i}$, $N_{i}$ and $M_{i}$ are the total, rotational and projection angular momentum quantum numbers of molecules $i=1,2$ in the absence of the electric dipole-dipole interaction. We evaluate the mutual alignment of the pair-eigenstates and find it to be independent of the magnetic field, except for states that undergo av...

  1. Linear coupling of alignment with transport in a polymer electrolyte membrane

    Science.gov (United States)

    Li, Jing; Park, Jong Keun; Moore, Robert B.; Madsen, Louis A.

    2011-07-01

    Polymer electrolyte membranes (PEMs) selectively transport ions and polar molecules in a robust yet formable solid support. Tailored PEMs allow for devices such as solid-state batteries,‘artificial muscle’ actuators and reverse-osmosis water purifiers. Understanding how PEM structure and morphology relate to mobile species transport presents a challenge for designing next-generation materials. Material length scales from subnanometre to 1 μm (refs , ) influence bulk properties such as ion conductivity and water transport. Here we employ multi-axis pulsed-field-gradient NMR (ref. ) to measure diffusion anisotropy, and 2H NMR spectroscopy and synchrotron small-angle X-ray scattering to probe orientational order as a function of water content and of membrane stretching. Strikingly, transport anisotropy linearly depends on the degree of alignment, signifying that membrane stretching affects neither the nanometre-scale channel dimensions nor the defect structure,causing only domain reorientation. The observed reorientation of anisotropic domains without perturbation of the inherent nematic-like domain character parallels the behaviour of nematic elastomers, promises tailored membrane conduction and potentially allows understanding of tunable shape-memory effects in PEM materials. This quantitative understanding will drive PEM design efforts towardsoptimal membrane transport, thus enabling more efficient polymeric batteries, fuel cells, mechanical actuators and water purification.

  2. A scheme of de-synchronization in globally coupled neural networks and its possible implications for vagus nerve stimulation

    Energy Technology Data Exchange (ETDEWEB)

    Li Yanlong [Institute of Theoretical Physics, Lanzhou University of Technology, Lanzhou 730050 (China) and Institute of Theoretical Physics, Lanzhou University, Lanzhou 730000 (China)], E-mail: liyl20031@126.com; Wu Min; Ma Jun [Institute of Theoretical Physics, Lanzhou University of Technology, Lanzhou 730050 (China); Chen Zhaoyang [Department of Chemistry, George Washington University, Washington, DC 20052 (United States); Wang Yinghai [Institute of Theoretical Physics, Lanzhou University, Lanzhou 730000 (China)

    2009-02-15

    A scheme of de-synchronization via pulse stimulation is numerically investigated in the Hindmarsh Rose globally coupled neural networks. The simulations show that synchronization evolves into de-synchronization in the globally coupled HR neural network when a part (about 10%) of neurons are stimulated with a pulse current signal. The network de-synchronization appears to be sensitive to the stimulation parameters. For the case of the same stimulation intensity, those weakly coupled networks reach de-synchronization more easily than strongly coupled networks. There exists a homologous asymptotic behavior in the region of higher frequency, and exist the optimal stimulation interval and period of continuous stimulation time when other stimulation parameters remain invariable.

  3. Simulation of self-organized waveguides for self-aligned coupling between micro- and nano-scale devices

    Science.gov (United States)

    Yoshimura, Tetsuzo

    2015-05-01

    We propose an optical coupling technique based on the reflective self-organized lightwave network (R-SOLNET), where optical devices with different core sizes are connected, for nano-scale-waveguide-based optical interconnects. Growth of R-SOLNET between a 3-μm-wide waveguide and a 600-nm-wide waveguide, on the core edge of which a luminescent target has been deposited, is simulated by the finite-difference time-domain method. The two waveguides are placed with gap distances ranging from 16 to 64 μm in a photopolymer with a refractive index that increases upon exposure to a write beam and luminescence. When a 400 nm wavelength write beam is introduced from the micro-scale waveguide, 470 nm luminescence is generated from the target. In the area where the write beam and the luminescence overlap, the refractive index increases rapidly. The write beam and the luminescence thus attract each other to merge into one through the self-focusing, forming a self-aligned coupling waveguide of R-SOLNET with a coupling loss of 1.5-1.8 dB, even when a lateral misalignment of 600 nm exists between them. This indicates that the R-SOLNET can be used as an optical solder to connect a micro-scale waveguide to a nano-scale waveguide. The optimum writing time required to attain the minimum coupling loss increases with increasing lateral misalignment. The dependence of the optimum writing time on the misalignment is reduced with increasing gap distance, and it almost vanishes when the distance is 64 μm, enabling unmonitored optical solder formation. R-SOLNET utilizing the two-photon photochemistry is briefly described as the next-generation SOLNET.

  4. Travelling Wave Pulse Coupled Oscillator (TWPCO) Using a Self-Organizing Scheme for Energy-Efficient Wireless Sensor Networks

    Science.gov (United States)

    Hanapi, Zurina Mohd; Othman, Mohamed; Zukarnain, Zuriati Ahmad

    2017-01-01

    Recently, Pulse Coupled Oscillator (PCO)-based travelling waves have attracted substantial attention by researchers in wireless sensor network (WSN) synchronization. Because WSNs are generally artificial occurrences that mimic natural phenomena, the PCO utilizes firefly synchronization of attracting mating partners for modelling the WSN. However, given that sensor nodes are unable to receive messages while transmitting data packets (due to deafness), the PCO model may not be efficient for sensor network modelling. To overcome this limitation, this paper proposed a new scheme called the Travelling Wave Pulse Coupled Oscillator (TWPCO). For this, the study used a self-organizing scheme for energy-efficient WSNs that adopted travelling wave biologically inspired network systems based on phase locking of the PCO model to counteract deafness. From the simulation, it was found that the proposed TWPCO scheme attained a steady state after a number of cycles. It also showed superior performance compared to other mechanisms, with a reduction in the total energy consumption of 25%. The results showed that the performance improved by 13% in terms of data gathering. Based on the results, the proposed scheme avoids the deafness that occurs in the transmit state in WSNs and increases the data collection throughout the transmission states in WSNs. PMID:28056020

  5. Travelling Wave Pulse Coupled Oscillator (TWPCO) Using a Self-Organizing Scheme for Energy-Efficient Wireless Sensor Networks.

    Science.gov (United States)

    Al-Mekhlafi, Zeyad Ghaleb; Hanapi, Zurina Mohd; Othman, Mohamed; Zukarnain, Zuriati Ahmad

    2017-01-01

    Recently, Pulse Coupled Oscillator (PCO)-based travelling waves have attracted substantial attention by researchers in wireless sensor network (WSN) synchronization. Because WSNs are generally artificial occurrences that mimic natural phenomena, the PCO utilizes firefly synchronization of attracting mating partners for modelling the WSN. However, given that sensor nodes are unable to receive messages while transmitting data packets (due to deafness), the PCO model may not be efficient for sensor network modelling. To overcome this limitation, this paper proposed a new scheme called the Travelling Wave Pulse Coupled Oscillator (TWPCO). For this, the study used a self-organizing scheme for energy-efficient WSNs that adopted travelling wave biologically inspired network systems based on phase locking of the PCO model to counteract deafness. From the simulation, it was found that the proposed TWPCO scheme attained a steady state after a number of cycles. It also showed superior performance compared to other mechanisms, with a reduction in the total energy consumption of 25%. The results showed that the performance improved by 13% in terms of data gathering. Based on the results, the proposed scheme avoids the deafness that occurs in the transmit state in WSNs and increases the data collection throughout the transmission states in WSNs.

  6. A generic data translation scheme for the coupling of high-fidelity fusion neutronics and CFD calculations

    Energy Technology Data Exchange (ETDEWEB)

    Qiu, Yuefeng, E-mail: yuefeng.qiu@kit.edu [Association KIT-Euratom, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Karlsruhe (Germany); Lu, Peng [Association KIT-Euratom, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Karlsruhe (Germany); School of Nuclear Science and Technology, University of Science and Technology of China, Hefei, Anhui 230026 (China); Fischer, Ulrich; Pereslavtsev, Pavel; Kecskes, Szabolcs [Association KIT-Euratom, Karlsruhe Institute of Technology (KIT), Hermann-von-Helmholtz-Platz 1, 76344 Eggenstein-Leopoldshafen, Karlsruhe (Germany)

    2014-10-15

    Highlights: • A data translation scheme has been developed for coupling Monte Carlo neutronics and CFD simulations. • It contains a generic data translation kernel, and interfaces for the MCNP, CFX and Fluent code. • A blanket test case model was investigated for validation and verification purposes. • Results of the so-called Inversion Check are very close to MCNP calculated results. - Abstract: The design of fusion device components is achieved through iterative coupled neutronics and thermal hydraulics analyses. A translation scheme has been developed for transferring the nuclear heating data from Monte Carlo (MC) neutronic calculations to CFD simulations. It contains a generic data translation kernel which supports the high-fidelity data mapping of MC meshes on CFD meshes, and provides interfaces for processing the nuclear response data on the meshes for CFD codes. This translation scheme has been implemented in the open-source pre- and post-processing platform SALOME to extend its capabilities on data manipulations and visualizations. For verification purposes, a blanket test case based on the Helium Cooled Pebble Bed Test Blanket Module was investigated. The processing of the heating distribution data was validated through a so-called Inversion Check comparing the inverted heating field with the original MC tally distribution. The results of the verification have been discussed in detail, and the reliability of the data translation scheme is concluded.

  7. A coupled neutronic/thermal-hydraulic scheme between COBAYA3 and SUBCHANFLOW within the NURESIM simulation platform

    Energy Technology Data Exchange (ETDEWEB)

    Calleja, M.; Stieglitz, R.; Sanchez, V.; Jimenez, J.; Imke, U. [Karlsruhe Inst. of Technology KIT, Inst. for Neutron Physics and Reactor Technology INR, Hermann-von-Helmholtz-Platz 1, D-76344 Eggenstein-Leopoldshafen (Germany)

    2012-07-01

    Multi-scale, multi-physics problems reveal significant challenges while dealing with coupled neutronic/thermal-hydraulic solutions. Current generation of codes applied to Light Water Reactors (LWR) are based on 3D neutronic nodal methods coupled with one or two phase flow thermal-hydraulic system or sub-channel codes. In addition, spatial meshing and temporal schemes are crucial for the proper description of the non-symmetrical core behavior in case of transient and accidents e.g. reactivity insertion accidents. This paper describes the coupling approach between the 3D neutron diffusion code COBAYA3 and the sub-channel code SUBCHANFLOW within SALOME. The coupling is done inside the SALOME open source platform that is characterized by a powerful pre- and post-processing capabilities and a novel functionality for mapping of the neutronic and thermal hydraulic domains. The peculiar functionalities of SALOME and the steps required for the code integration and coupling are presented. The validation of the coupled codes is done based on two benchmarks the PWR MOX/UO{sub 2} RIA and the TMI-1 MSLB benchmark. A discussion of the prediction capability of COBAYA3/SUBCHANFLOW compared to other coupled solutions will be provided too. (authors)

  8. A hybrid surface layer parameterization scheme for the two-way fully coupled atmosphere-ocean wave system WEW

    Science.gov (United States)

    Katsafados, Petros; Papadopoulos, Anastasios; Varlas, George; Korres, Gerasimos

    2015-04-01

    The two-way fully coupled atmosphere-ocean wave system WEW has been recently developed in order to study the factors that contribute to the air-sea interaction processes and feedbacks. The coupled system consists of two components: the atmospheric component which is based on the Workstation Eta non-hydrostatic limited area model and the ocean-wave component which is based on the fourth generation OpenMP (OMP) version of the WAM model. The WEW has been already evaluated in a number of high-impact weather and sea state events where generally a more realistic representation of the momentum exchanges in the ocean wind-wave system has been shown However, the new developed wind-wave parameterization scheme reduces both the near surface wind speed and the significant wave height as a response to the increased aerodynamic drag considered by the atmospheric model over rough sea surfaces. Such behavior is mainly attributed to the surface layer parameterization scheme of the atmospheric component which is based on the Mellor-Yamada-Janjic (MYJ) scheme. It is noted that this scheme has been adjusted to support independent atmospheric simulations. Therefore, we proceed to develop a new hybrid surface layer parameterization based on the MYJ and the Janssen schemes that operate in the atmospheric and ocean wave components of the WEW, respectively. In this case the roughness length depends on the wave age instead of the Charnock parameter following the formulation proposed by Vickers and Mahrt. The spatial variability of the wave age is estimated at each ocean wave component time step and it is directly provided to the MYJ scheme. The parameterization of the viscous sublayer and the universal functions for the estimation of the near surface wind speed have been also revised accordingly. In this study, a test version of the new hybrid scheme of WEW has been statistically evaluated against a number of buoys and satellite retrievals over the Mediterranean Sea in a case study of high

  9. Magnetosphere-ionosphere coupling currents in Jupiter's middle magnetosphere: effect of magnetosphere-ionosphere decoupling by field-aligned auroral voltages

    Directory of Open Access Journals (Sweden)

    J. D. Nichols

    2005-03-01

    Full Text Available We consider the effect of field-aligned voltages on the magnetosphere-ionosphere coupling current system associated with the breakdown of rigid corotation of equatorial plasma in Jupiter's middle magnetosphere. Previous analyses have assumed perfect mapping of the electric field and flow along equipotential field lines between the equatorial plane and the ionosphere, whereas it has been shown that substantial field-aligned voltages must exist to drive the field-aligned currents associated with the main auroral oval. The effect of these field-aligned voltages is to decouple the flow of the equatorial and ionospheric plasma, such that their angular velocities are in general different from each other. In this paper we self-consistently include the field-aligned voltages in computing the plasma flows and currents in the system. A third order differential equation is derived for the ionospheric plasma angular velocity, and a power series solution obtained which reduces to previous solutions in the limit that the field-aligned voltage is small. Results are obtained to second order in the power series, and are compared to the original zeroth order results with no parallel voltage. We find that for system parameters appropriate to Jupiter the effect of the field-aligned voltages on the solutions is small, thus validating the results of previously-published analyses.

  10. A 3-D variational assimilation scheme in coupled transport-biogeochemical models: Forecast of Mediterranean biogeochemical properties.

    Science.gov (United States)

    Teruzzi, Anna; Dobricic, Srdjan; Solidoro, Cosimo; Cossarini, Gianpiero

    2014-01-01

    [1] Increasing attention is dedicated to the implementation of suitable marine forecast systems for the estimate of the state of the ocean. Within the framework of the European MyOcean infrastructure, the pre-existing short-term Mediterranean Sea biogeochemistry operational forecast system has been upgraded by assimilating remotely sensed ocean color data in the coupled transport-biogeochemical model OPATM-BFM using a 3-D variational data assimilation (3D-VAR) procedure. In the present work, the 3D-VAR scheme is used to correct the four phytoplankton functional groups included in the OPATM-BFM in the period July 2007 to September 2008. The 3D-VAR scheme decomposes the error covariance matrix using a sequence of different operators that account separately for vertical covariance, horizontal covariance, and covariance among biogeochemical variables. The assimilation solution is found in a reduced dimensional space, and the innovation for the biogeochemical variables is obtained by the sequential application of the covariance operators. Results show a general improvement in the forecast skill, providing a correction of the basin-scale bias of surface chlorophyll concentration and of the local-scale spatial and temporal dynamics of typical bloom events. Further, analysis of the assimilation skill provides insights into the functioning of the model. The computational costs of the assimilation scheme adopted are low compared to other assimilation techniques, and its modular structure facilitates further developments. The 3D-VAR scheme results especially suitable for implementation within a biogeochemistry operational forecast system.

  11. Strong-coupling constant with flavor thresholds at five loops in the anti M anti S scheme

    Energy Technology Data Exchange (ETDEWEB)

    Kniehl, B.A.; Kotikov, A.V.; Onishchenko, A.I.; Veretin, O.L. [Hamburg Univ. (Germany). 2. Inst. fuer Theoretische Physik

    2006-07-15

    We present in analytic form the matching conditions for the strong-coupling constant {alpha}{sub s}{sup (n{sub f})}({mu}) at the flavor thresholds to four loops in the modified minimal-subtraction scheme. Taking into account the present knowledge on the coefficient {beta}{sub 4} of the Callan-Symanzik beta function of quantum chromo-dynamics, we thus derive a five-loop formula for {alpha}{sub s}{sup (n{sub f})}({mu}) together with appropriate relationships between the asymptotic scale parameters {lambda}{sup (n{sub f})} for different numbers of flavors n{sub f}. (Orig.)

  12. An advanced scheme for wet scavenging and liquid-phase chemistry in a regional online-coupled chemistry transport model

    Science.gov (United States)

    Knote, C.; Brunner, D.

    2012-10-01

    Clouds are reaction chambers for atmospheric trace gases and aerosols, and the associated precipitation is a major sink for atmospheric constituents. The regional chemistry-climate model COSMO-ART has been lacking a description of wet scavenging of gases and aqueous-phase chemistry. In this work we present a coupling of COSMO-ART with a wet scavenging and aqueous-phase chemistry scheme. The coupling is made consistent with the cloud microphysics scheme of the underlying meteorological model COSMO. While the choice of the aqueous-chemistry mechanism is flexible, the effects of a simple sulfur oxidation scheme are shown in the application of the coupled system in this work. We give details explaining the coupling and extensions made, then present results from idealized flow-over-hill experiments in a 2-D model setup and finally results from a full 3-D simulation. Comparison against measurement data shows that the scheme efficiently reduces SO2 trace gas concentrations by 0.3 ppbv (-30%) on average, while leaving O3 and NOx unchanged. PM10 aerosol mass, which has been overestimated previously, is now in much better agreement with measured values due to a stronger scavenging of coarse particles. While total PM2.5 changes only little, chemical composition is improved notably. Overestimations of nitrate aerosols are reduced by typically 0.5-1 μg m-3 (up to -2 μg m-3 in the Po Valley) while sulfate mass is increased by 1-1.5 μg m-3 on average (up to 2.5 μg m-3 in Eastern Europe). The effect of cloud processing of aerosols on its size distribution, i. e. a shift towards larger diameters, is observed. Compared against wet deposition measurements the system underestimates the total wet deposited mass for the simulated case study. We find that while evaporation of cloud droplets dominates in higher altitudes, evaporation of precipitation can contribute up to 50% of total evaporated mass near the surface.

  13. An advanced scheme for wet scavenging and liquid-phase chemistry in a regional online-coupled chemistry transport model

    Directory of Open Access Journals (Sweden)

    C. Knote

    2012-10-01

    Full Text Available Clouds are reaction chambers for atmospheric trace gases and aerosols, and the associated precipitation is a major sink for atmospheric constituents. The regional chemistry-climate model COSMO-ART has been lacking a description of wet scavenging of gases and aqueous-phase chemistry. In this work we present a coupling of COSMO-ART with a wet scavenging and aqueous-phase chemistry scheme. The coupling is made consistent with the cloud microphysics scheme of the underlying meteorological model COSMO. While the choice of the aqueous-chemistry mechanism is flexible, the effects of a simple sulfur oxidation scheme are shown in the application of the coupled system in this work. We give details explaining the coupling and extensions made, then present results from idealized flow-over-hill experiments in a 2-D model setup and finally results from a full 3-D simulation. Comparison against measurement data shows that the scheme efficiently reduces SO2 trace gas concentrations by 0.3 ppbv (−30% on average, while leaving O3 and NOx unchanged. PM10 aerosol mass, which has been overestimated previously, is now in much better agreement with measured values due to a stronger scavenging of coarse particles. While total PM2.5 changes only little, chemical composition is improved notably. Overestimations of nitrate aerosols are reduced by typically 0.5–1 μg m−3 (up to −2 μg m−3 in the Po Valley while sulfate mass is increased by 1–1.5 μg m−3 on average (up to 2.5 μg m−3 in Eastern Europe. The effect of cloud processing of aerosols on its size distribution, i. e. a shift towards larger diameters, is observed. Compared against wet deposition measurements the system underestimates the total wet deposited mass for the simulated case study. We find that while evaporation of cloud droplets dominates in higher altitudes, evaporation of precipitation can

  14. Current steering detection scheme of three terminal antenna-coupled terahertz field effect transistor detectors

    OpenAIRE

    Földesy, Péter

    2013-01-01

    An antenna-coupled field effect transistor (FET) as a plasma wave terahertz detector is used with the current steering to record separately the gate-source and gate-drain photoresponses and their phase sensitive combination. This method is based on the observation that the plasmon-terminal coupling is cut off in saturation, resulting in only one-sided sensitivity. A polarimetric example is presented with intensity and polarization angle reconstruction using a single three-terminal antenna-cou...

  15. An Efficient Explicit Finite-Difference Scheme for Simulating Coupled Biomass Growth on Nutritive Substrates

    Directory of Open Access Journals (Sweden)

    G. F. Sun

    2015-01-01

    Full Text Available A novel explicit finite-difference (FD method is presented to simulate the positive and bounded development process of a microbial colony subjected to a substrate of nutrients, which is governed by a nonlinear parabolic partial differential equations (PDE system. Our explicit FD scheme is uniquely designed in such a way that it transfers the nonlinear terms in the original PDE into discrete sets of linear ones in the algebraic equation system that can be solved very efficiently, while ensuring the stability and the boundedness of the solution. This is achieved through (1 a proper design of intertwined FD approximations for the diffusion function term in both time and spatial variations and (2 the control of the time-step through establishing theoretical stability criteria. A detailed theoretical stability analysis is conducted to reveal that our FD method is indeed stable. Our examples verified the fact that the numerical solution can be ensured nonnegative and bounded to simulate the actual physics. Numerical examples have also been presented to demonstrate the efficiency of the proposed scheme. The present scheme is applicable for solving similar systems of PDEs in the investigation of the dynamics of biological films.

  16. Scheme for realizing quantum computation and quantum information transfer with superconducting qubits coupling to a 1D transmission line resonator

    Institute of Scientific and Technical Information of China (English)

    Shi Zhen-Gang; Chen Xiong-Wen; Zhu Xi-Xiang; Song Ke-Hui

    2009-01-01

    This paper proposes a simple scheme for realizing one-qubit and two-qubit quantum gates as well as multiqubit entanglement based on dc-SQUID charge qubits through the control of their coupling to a ID transmission line resonator (TLR). The TLR behaves effectively as a quantum data-bus mode of a harmonic oscillator, which has several practical advantages including strong coupling strength, reproducibility, immunity to 1// noise, and suppressed spontaneous emission. In this protocol, the data-bus does not need to stay adiabatically in its ground state, which results in not only fast quantum operation, but also high-fidelity quantum information processing. Also, it elaborates the transfer process with the 1D transmission line.

  17. A scheme to interpolate potential energy surfaces and derivative coupling vectors without performing a global diabatization.

    Science.gov (United States)

    Evenhuis, Christian; Martínez, Todd J

    2011-12-14

    Simulation of non-adiabatic molecular dynamics requires the description of multiple electronic state potential energy surfaces and their couplings. Ab initio molecular dynamics approaches provide an attractive avenue to accomplish this, but at great computational expense. Interpolation approaches provide a possible route to achieve flexible descriptions of the potential energy surfaces and their couplings at reduced expense. A previously developed approach based on modified Shepard interpolation required global diabatization, which can be problematic. Here, we extensively revise this previous approach, avoiding the need for global diabatization. The resulting interpolated potentials provide only adiabatic energies, gradients, and derivative couplings. This new interpolation approach has been integrated with the ab initio multiple spawning method and it has been rigorously validated against direct dynamics. It is shown that, at least for small molecules, constructing an interpolated PES can be more efficient than performing direct dynamics as measured by the total number of ab initio calculations that are required for a given accuracy.

  18. A cavity-Cooper pair transistor scheme for investigating quantum optomechanics in the ultra-strong coupling regime

    Science.gov (United States)

    Rimberg, A. J.; Blencowe, M. P.; Armour, A. D.; Nation, P. D.

    2014-05-01

    We propose a scheme involving a Cooper pair transistor (CPT) embedded in a superconducting microwave cavity, where the CPT serves as a charge tunable quantum inductor to facilitate ultra-strong coupling between photons in the cavity and a nano- to meso-scale mechanical resonator. The mechanical resonator is capacitively coupled to the CPT, such that mechanical displacements of the resonator cause a shift in the CPT inductance and hence the cavity's resonant frequency. The amplification provided by the CPT is sufficient for the zero point motion of the mechanical resonator alone to cause a significant change in the cavity resonance. Conversely, a single photon in the cavity causes a shift in the mechanical resonator position on the order of its zero point motion. As a result, the cavity-Cooper pair transistor coupled to a mechanical resonator will be able to access a regime in which single photons can affect single phonons and vice versa. Realizing this ultra-strong coupling regime will facilitate the creation of non-classical states of the mechanical resonator, as well as the means to accurately characterize such states by measuring the cavity photon field.

  19. High-order Spatio-temporal Schemes for Coupled, Multi-physics Reactor Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Mr. Vijay S. Mahadevan; Dr. Jean C. Ragusa

    2008-09-01

    This report summarizes the work done in the summer of 08 by the Ph.D. student Vijay Mahadevan. The main focus of the work was to coupled 3-D neutron difusion to 3-D heat conduction in parallel with accuracy greater than or equal to 2nd order in space and time. Results show that the goal was attained.

  20. PSO-BELBIC scheme for two-coupled distillation column process

    Directory of Open Access Journals (Sweden)

    Hassen T. Dorrah

    2011-01-01

    Full Text Available In the two-coupled distillation column process, keeping the tray temperatures within a specified range around their steady state values assures the specifications for top and bottom product purity. The two-coupled distillation column is a 4 Input/4 Output process. Normally, control engineers decouple the process into four independent loops. They assign a PID controller to control each loop. Tuning of conventional PID controllers is very difficult when the process is subject to external unknown factors. The paper proposes a Brain Emotional Learning Based Intelligent Controller (BELBIC to replace conventional PID controllers. Moreover, the values of BELBIC and PID gains are optimized using a particle swarm optimization (PSO technique with minimization of Integral Square Error (ISE for all loops. The paper compares the performance of the proposed PSO-BELBICs with that of conventional PSO-PID controllers. PSO-BELBICs prove their usefulness in improving time domain behavior with keeping robustness for all loops.

  1. Communication: Spin densities within a unitary group based spin-adapted open-shell coupled-cluster theory: Analytic evaluation of isotropic hyperfine-coupling constants for the combinatoric open-shell coupled-cluster scheme

    Energy Technology Data Exchange (ETDEWEB)

    Datta, Dipayan, E-mail: datta.dipayan@gmail.com; Gauss, Jürgen, E-mail: gauss@uni-mainz.de [Institut für Physikalische Chemie, Johannes Gutenberg-Universität Mainz, Duesbergweg 10-14, D-55128 Mainz (Germany)

    2015-07-07

    We report analytical calculations of isotropic hyperfine-coupling constants in radicals using a spin-adapted open-shell coupled-cluster theory, namely, the unitary group based combinatoric open-shell coupled-cluster (COSCC) approach within the singles and doubles approximation. A scheme for the evaluation of the one-particle spin-density matrix required in these calculations is outlined within the spin-free formulation of the COSCC approach. In this scheme, the one-particle spin-density matrix for an open-shell state with spin S and M{sub S} = + S is expressed in terms of the one- and two-particle spin-free (charge) density matrices obtained from the Lagrangian formulation that is used for calculating the analytic first derivatives of the energy. Benchmark calculations are presented for NO, NCO, CH{sub 2}CN, and two conjugated π-radicals, viz., allyl and 1-pyrrolyl in order to demonstrate the performance of the proposed scheme.

  2. A Maximum Efficiency Point Tracking Control Scheme Based on Different Cross Coupling of Dual-Receiver Inductive Power Transfer System

    Directory of Open Access Journals (Sweden)

    Ruikun Mai

    2017-02-01

    Full Text Available One of the most promising inductive power transfer applications is the wireless power supply for locomotives which may cancel the need for pantographs. In order to meet the dynamic and high power demands of wireless power supplies for locomotives, a relatively long transmitter track and multiple receivers are usually adopted. However, during the dynamic charging, the mutual inductances between the transmitter and receivers vary and the load of the locomotives also changes randomly, which dramatically affects the system efficiency. A maximum efficiency point tracking control scheme is proposed to improve the system efficiency against the variation of the load and the mutual inductances between the transmitter and receivers while considering the cross coupling between receivers. Firstly, a detailed theoretical analysis on dual receivers is carried out. Then a control scheme with three control loops is proposed to regulate the receiver currents to be the same, to regulate the output voltage and to search for the maximum efficiency point. Finally, a 2 kW prototype is established to validate the performance of the proposed method. The overall system efficiency (DC-DC efficiency reaches 90.6% at rated power and is improved by 5.8% with the proposed method under light load compared with the traditional constant output voltage control method.

  3. A non-oscillatory balanced scheme for an idealized tropical climate model. Part II. Nonlinear coupling and moisture effects

    Energy Technology Data Exchange (ETDEWEB)

    Khouider, Boualem [University of Victoria, Mathematics and Statistics, Victoria, B.C. (Canada); Majda, Andrew J. [New York University, Department of Mathematics and Center for Atmosphere/Ocean Sciences, NY (United States); Courant Institute, New York, NY (United States)

    2005-10-01

    We use the non-oscillatory balanced numerical scheme developed in Part I to track the dynamics of a dry highly nonlinear barotropic/baroclinic coupled solitary wave, as introduced by Biello and Majda (2004), and of the moisture fronts of Frierson et al. (2004) in the presence of dry gravity waves, a barotropic trade wind, and the beta effect. It is demonstrated that, for the barotropic/baroclinic solitary wave, except for a little numerical dissipation, the scheme utilized here preserves total energy despite the strong interactions and exchange of energy between the baroclinic and barotropic components of the flow. After a short transient period where the numerical solution stays close to the asymptotic predictions, the flow develops small scale eddies and ultimately becomes highly turbulent. It is found here that the interaction of a dry gravity wave with a moisture front can either result in a reflection of a fast moistening front or the pure extinction of the precipitation. The barotropic trade wind stretches the precipitation patches and increases the lifetime of the moisture fronts which decay naturally by the effects of dissipation through precipitation while the Coriolis effect makes the moving precipitation patches disappear and appear at other times and places. (orig.)

  4. Ergodic Secret Alignment

    CERN Document Server

    Bassily, Raef

    2010-01-01

    In this paper, we introduce two new achievable schemes for the fading multiple access wiretap channel (MAC-WT). In the model that we consider, we assume that perfect knowledge of the state of all channels is available at all the nodes in a causal fashion. Our schemes use this knowledge together with the time varying nature of the channel model to align the interference from different users at the eavesdropper perfectly in a one-dimensional space while creating a higher dimensionality space for the interfering signals at the legitimate receiver hence allowing for better chance of recovery. While we achieve this alignment through signal scaling at the transmitters in our first scheme (scaling based alignment (SBA)), we let nature provide this alignment through the ergodicity of the channel coefficients in the second scheme (ergodic secret alignment (ESA)). For each scheme, we obtain the resulting achievable secrecy rate region. We show that the secrecy rates achieved by both schemes scale with SNR as 1/2log(SNR...

  5. Development and evaluation of an ozone deposition scheme for coupling to a terrestrial biosphere model

    Science.gov (United States)

    Franz, Martina; Simpson, David; Arneth, Almut; Zaehle, Sönke

    2017-01-01

    Ozone (O3) is a toxic air pollutant that can damage plant leaves and substantially affect the plant's gross primary production (GPP) and health. Realistic estimates of the effects of tropospheric anthropogenic O3 on GPP are thus potentially important to assess the strength of the terrestrial biosphere as a carbon sink. To better understand the impact of ozone damage on the terrestrial carbon cycle, we developed a module to estimate O3 uptake and damage of plants for a state-of-the-art global terrestrial biosphere model called OCN. Our approach accounts for ozone damage by calculating (a) O3 transport from 45 m height to leaf level, (b) O3 flux into the leaf, and (c) ozone damage of photosynthesis as a function of the accumulated O3 uptake over the lifetime of a leaf. A comparison of modelled canopy conductance, GPP, and latent heat to FLUXNET data across European forest and grassland sites shows a general good performance of OCN including ozone damage. This comparison provides a good baseline on top of which ozone damage can be evaluated. In comparison to literature values, we demonstrate that the new model version produces realistic O3 surface resistances, O3 deposition velocities, and stomatal to total O3 flux ratios. A sensitivity study reveals that key metrics of the air-to-leaf O3 transport and O3 deposition, in particular the stomatal O3 uptake, are reasonably robust against uncertainty in the underlying parameterisation of the deposition scheme. Nevertheless, correctly estimating canopy conductance plays a pivotal role in the estimate of cumulative O3 uptake. We further find that accounting for stomatal and non-stomatal uptake processes substantially affects simulated plant O3 uptake and accumulation, because aerodynamic resistance and non-stomatal O3 destruction reduce the predicted leaf-level O3 concentrations. Ozone impacts on GPP and transpiration in a Europe-wide simulation indicate that tropospheric O3 impacts the regional carbon and water cycling less

  6. Design of novel three port optical gates scheme for the integration of large optical cavity electroabsorption modulators and evanescently-coupled photodiodes

    Institute of Scientific and Technical Information of China (English)

    Liao Zai-Yi; Yang Hua; Wang Wei

    2008-01-01

    This paper presents a novel scheme to monolithically integrate an evanescently-coupled uni-travelling carrier photodiode with a planar short multimode waveguide structure and a large optical cavity electroabsorption modulator based on a multimode waveguide structure. By simulation, both electroabsorption modulator and photodiode show excellent optical performances. The device can be fabricated with conventional photolithography, reactive ion etching, and chemical wet etching.

  7. Coupling between lower-tropospheric convective mixing and low-level clouds: Physical mechanisms and dependence on convection scheme.

    Science.gov (United States)

    Vial, Jessica; Bony, Sandrine; Dufresne, Jean-Louis; Roehrig, Romain

    2016-12-01

    Several studies have pointed out the dependence of low-cloud feedbacks on the strength of the lower-tropospheric convective mixing. By analyzing a series of single-column model experiments run by a climate model using two different convective parametrizations, this study elucidates the physical mechanisms through which marine boundary-layer clouds depend on this mixing in the present-day climate and under surface warming. An increased lower-tropospheric convective mixing leads to a reduction of low-cloud fraction. However, the rate of decrease strongly depends on how the surface latent heat flux couples to the convective mixing and to boundary-layer cloud radiative effects: (i) on the one hand, the latent heat flux is enhanced by the lower-tropospheric drying induced by the convective mixing, which damps the reduction of the low-cloud fraction, (ii) on the other hand, the latent heat flux is reduced as the lower troposphere stabilizes under the effect of reduced low-cloud radiative cooling, which enhances the reduction of the low-cloud fraction. The relative importance of these two different processes depends on the closure of the convective parameterization. The convective scheme that favors the coupling between latent heat flux and low-cloud radiative cooling exhibits a stronger sensitivity of low-clouds to convective mixing in the present-day climate, and a stronger low-cloud feedback in response to surface warming. In this model, the low-cloud feedback is stronger when the present-day convective mixing is weaker and when present-day clouds are shallower and more radiatively active. The implications of these insights for constraining the strength of low-cloud feedbacks observationally is discussed.

  8. Investigating marine stratocumulus with a fully coupled cloud-aerosol scheme in a WRF/Chem Large Eddy Simulation

    Science.gov (United States)

    Kazil, J.; Wang, H.; Feingold, G.

    2009-12-01

    Drizzle in stratocumulus clouds is triggered by low concentrations of cloud condensation nuclei (CCN), and concurrently acts as a sink of CCN. The progression of this cloud-aerosol feedback may result in a transition in marine boundary layer dynamics and cloud structure; Closed cell circulation, characterized by a solid stratocumulus layer, may transition into an open cellular mode featuring low cloud fraction. Aerosol sources may balance the loss of CCN from drizzle, and delay or prevent the emergence of open cell circulation. Such sources include particle emissions from the sea surface, entrainment of aerosol from the free troposphere into the cloud deck, advection from land sources, and aerosol nucleation. In order to investigate the role of aerosol sources and processes in the transition between these two states, we have coupled in detail aerosol processes, cloud microphysics, and gas and aqueous chemistry in the WRF/Chem model. We operate WRF/Chem in Large Eddy Simulation mode. Aerosol nucleation is described with a sulfuric acid/water scheme based on laboratory measurements of the nucleation process. Here we present first results on the role of aerosol nucleation for cloud properties and drizzle formation in pristine conditions of the South-East Pacific region, and in polluted conditions.

  9. Graphene oxide liquid crystals as a versatile and tunable alignment medium for the measurement of residual dipolar couplings in organic solvents.

    Science.gov (United States)

    Lei, Xinxiang; Xu, Zhen; Sun, Han; Wang, Shun; Griesinger, Christian; Peng, Li; Gao, Chao; Tan, Ren X

    2014-08-13

    Residual dipolar couplings (RDCs) have proven to be an invaluable anisotropic NMR parameter for the structural elucidation of complex biopolymers and organic molecules. However, a remaining bottleneck limiting its wider use by organic and natural product chemists is the lack of a range of easily applicable aligning media for diverse organic solvents. In this study, graphene oxide (GO) liquid crystals (LCs) were developed to induce partial orientation of organic molecules to allow RDC measurements. These LCs were determined to be maintainable at very low concentrations (as low as 1 mg/mL, corresponding to quadrupolar (2)H splittings ranging from 2.8 to 30 Hz and maximum (13)C-(1)H dipolar couplings of 20 Hz for camphor in a CH3COCH3/water system) and to be remarkably stable and broadly compatible with aqueous and organic solvents such as dimethyl sulfoxide, CH3COCH3, and CH3CN. Moreover, compared with those for other alignment media, very clean and high-quality NMR spectra were acquired with the GO molecules in solution because of their rigidity and high molecular weight. The developed medium offers a versatile and robust method for RDC measurements that may routinize the RDC-based structure determination of organic molecules.

  10. Group Based Interference Alignment

    CERN Document Server

    Ma, Yanjun; Chen, Rui; Yao, Junliang

    2010-01-01

    in $K$-user single-input single-output (SISO) frequency selective fading interference channels, it is shown that the achievable multiplexing gain is almost surely $K/2$ by using interference alignment (IA). However when the signaling dimensions is limited, allocating all the resource to all the users simultaneously is not optimal. According to this problem, a group based interference alignment (GIA) scheme is proposed and a search algorithm is designed to get the group patterns and the resource allocation among them. Analysis results show that our proposed scheme achieves a higher multiplexing gain when the resource is limited.

  11. Exchange coupling between laterally adjacent nanomagnets

    Science.gov (United States)

    Dey, H.; Csaba, G.; Bernstein, G. H.; Porod, W.

    2016-09-01

    We experimentally demonstrate exchange-coupling between laterally adjacent nanomagnets. Our results show that two neighboring nanomagnets that are each antiferromagnetically exchange-coupled to a common ferromagnetic bottom layer can be brought into strong ferromagnetic interaction. Simulations show that interlayer exchange coupling effectively promotes ferromagnetic alignment between the two nanomagnets, as opposed to antiferromagnetic alignment due to dipole-coupling. In order to experimentally demonstrate the proposed scheme, we fabricated arrays of pairs of elongated, single-domain nanomagnets. Magnetic force microscopy measurements show that most of the pairs are ferromagnetically ordered. The results are in agreement with micromagnetic simulations. The presented scheme can achieve coupling strengths that are significantly stronger than dipole coupling, potentially enabling far-reaching applications in Nanomagnet Logic, spin-wave devices and three-dimensional storage and computing.

  12. Micro/nanoscale self-aligned optical couplings of the self-organized lightwave network (SOLNET) formed by excitation lights from outside

    Science.gov (United States)

    Yoshimura, Tetsuzo; Nawata, Hideyuki

    2017-01-01

    The self-organized lightwave network (SOLNET) provides "optical solder," which enables self-aligned optical couplings between misaligned optical devices with different core sizes. We propose a low-cost SOLNET formation method, in which write beams are generated within optical devices by excitation lights from outside. Simulations based on the finite-difference time-domain method reveal that the two-photon processes enhance optical-solder capabilities. In couplings between 600-nm-wide waveguides opposed with 32-μm distance a wide lateral misalignment tolerance of 2 μm to maintain <1 dB loss at 650 nm in wavelength is obtained. The coupling loss at 1-μm lateral misalignment is 0.4 dB. In couplings between 3-μm-wide and 600-nm-wide waveguides, losses at 650 nm are 0.1 dB for no misalignments and 0.9 dB for 1-μm misalignment. These results suggest that SOLNETs provide optical solder with mode size converting functions.

  13. Non-oscillatory Central Differencing (Noc) Scheme to Solve the Shallow Water Equations Coupled with Sediment Transport and Bed Evolution in Two Dimensions

    Science.gov (United States)

    Zia, H.; Simpson, G.

    2013-12-01

    The interaction between flowing surface water and sediment transport has numerous important applications in Earth science, including controls on river patterns, drainage basin evolution and morphological changes induced by extreme events such as tsunamis and dam breaks. Many of these problems can be investigated with the mathematical model of the shallow water equations coupled to conservation of sediment concentration and empirical functions for bed friction, substrate erosion and deposition. However, this system of equations is highly nonlinear, requiring fast and robust numerical methods. In this study, we investigate the solution of the shallow water equations coupled to sediment transports via the Non-oscillatory Central Differencing (NOC ) method, a second order scheme based on a predictor-corrector method. The scheme is chosen for its relative stability and robustness. The NOC scheme is especially favorable in situations where the water depth approaches zero and for steady flow conditions, both of which cause problems with more naive schemes. The model is verified by comparing computed results with documented solutions. We are currently using the model to investigate coupling between flow and sediment transport in alluvial rivers.

  14. Marine boundary layer cloud regimes and POC formation in an LES coupled to a bulk aerosol scheme

    Directory of Open Access Journals (Sweden)

    A. H. Berner

    2013-07-01

    Full Text Available A large-eddy simulation (LES coupled to a new bulk aerosol scheme is used to study long-lived regimes of aerosol-boundary layer cloud-precipitation interaction and the development of pockets of open cells (POCs in subtropical stratocumulus cloud layers. The aerosol scheme prognoses mass and number concentration of a single log-normal accumulation mode with surface and entrainment sources, evolving subject to processing of activated aerosol and scavenging of dry aerosol by cloud and rain. The LES with the aerosol scheme is applied to a range of steadily-forced simulations idealized from a well-observed POC case. The long-term system evolution is explored with extended two-dimensional simulations of up to 20 days, mostly with diurnally-averaged insolation. One three-dimensional two-day simulation confirms the initial development of the corresponding two-dimensional case. With weak mean subsidence, an initially aerosol-rich mixed layer deepens, the capping stratocumulus cloud slowly thickens and increasingly depletes aerosol via precipitation accretion, then the boundary layer transitions within a few hours into an open-cell regime with scattered precipitating cumuli, in which entrainment is much weaker. The inversion slowly collapses for several days until the cumulus clouds are too shallow to efficiently precipitate. Inversion cloud then reforms and radiatively drives renewed entrainment, allowing the boundary layer to deepen and become more aerosol-rich, until the stratocumulus layer thickens enough to undergo another cycle of open-cell formation. If mean subsidence is stronger, the stratocumulus never thickens enough to initiate drizzle and settles into a steady state. With lower initial aerosol concentrations, this system quickly transitions into open cells, collapses, and redevelops into a different steady state with a shallow, optically thin cloud layer. In these steady states, interstitial scavenging by cloud droplets is the main sink of

  15. Research of Alignment Problem About Couplings' Installation%联轴器安装时找中心问题的研究

    Institute of Scientific and Technical Information of China (English)

    王娟平

    2011-01-01

    The paper studies alignment problem about Couplings' installation. According to the principle of alignment, and the recording methods of the measured data and formulas by bridge gauge in the cylindrical surface and dial gauge on the end surface, it accurately accesses to the deviation, then makes a two-axis center state diagram, and calculates adjustment of the bearing. Based on the amount of adjustment to adjust, it will ensure the connection precision of the two-axis.%本文对于联轴器安装时的找中心问题做了研究.依据找中心的原理,借助于桥规在外圆面上和百分表在端面上测得数据的记录方法和计算公式,精确地获得偏差值,然后做出两轴的中心状态图,再计算轴瓦的调整量.据此调整量进行调整,即可确保两轴的连接精度.

  16. High statistics determination of the strong coupling constant in Taylor scheme and its OPE Wilson coefficient from lattice QCD with a dynamical charm

    CERN Document Server

    Blossier, B; Brinet, M; De Soto, F; Morenas, V; Pène, O; Petrov, K; Rodríguez-Quintero, J

    2014-01-01

    This paper reports on the determination of $\\alpha_S$ from lattice simulations with 2+1+1 twisted-mass dynamical flavours {\\it via} the computation of the ghost-gluon coupling renormalized in the MOM Taylor scheme. A high-statistics sample of gauge configurations, used to evaluate the coupling from ghost and gluon propagators, allows for the appropriate update of previous results, now performing an improved analysis of data with reduced statistical errors and the systematical uncertainties under a better control.

  17. Critical issues for high-power FEL based on microtron recuperator/electron out-coupling scheme

    Science.gov (United States)

    Vinokurov, Nikolai A.; Zholents, Alexander A.; Fawley, William M.; Kim, Kwang J.

    1997-05-01

    The FELs based on the rf accelerator-recuperator and the electron outcoupling is promising for obtaining average output power of hundreds of kilowatts. We present basic considerations for the system stability and performance optimization for this scheme.

  18. Rod microglia: elongation, alignment, and coupling to form trains across the somatosensory cortex after experimental diffuse brain injury

    Directory of Open Access Journals (Sweden)

    Ziebell Jenna M

    2012-10-01

    to cytoarchitecture of dendrites and axons, with no alignment with astrocytes and oligodendrocytes. Iba1-positive rod microglial cells differentially express other known markers for reactive microglia including OX-6 and CD68. Conclusion Diffuse traumatic brain injury induces a distinct rod microglia morphology, unique phenotype, and novel association between cells; these observations entice further investigation for impact on neurological outcome.

  19. A low-order coupled chemistry meteorology model for testing online and offline data assimilation schemes: L95-GRS (v1.0)

    Science.gov (United States)

    Haussaire, J.-M.; Bocquet, M.

    2016-01-01

    Bocquet and Sakov (2013) introduced a low-order model based on the coupling of the chaotic Lorenz-95 (L95) model, which simulates winds along a mid-latitude circle, with the transport of a tracer species advected by this zonal wind field. This model, named L95-T, can serve as a playground for testing data assimilation schemes with an online model. Here, the tracer part of the model is extended to a reduced photochemistry module. This coupled chemistry meteorology model (CCMM), the L95-GRS (generic reaction set) model, mimics continental and transcontinental transport and the photochemistry of ozone, volatile organic compounds and nitrogen oxides. Its numerical implementation is described. The model is shown to reproduce the major physical and chemical processes being considered. L95-T and L95-GRS are specifically designed and useful for testing advanced data assimilation schemes, such as the iterative ensemble Kalman smoother (IEnKS), which combines the best of ensemble and variational methods. These models provide useful insights prior to the implementation of data assimilation methods into larger models. We illustrate their use with data assimilation schemes on preliminary yet instructive numerical experiments. In particular, online and offline data assimilation strategies can be conveniently tested and discussed with this low-order CCMM. The impact of observed chemical species concentrations on the wind field estimate can be quantitatively assessed. The impacts of the wind chaotic dynamics and of the chemical species non-chaotic but highly nonlinear dynamics on the data assimilation strategies are illustrated.

  20. Implementation of suitable flow injection/sequential-sample separation/preconcentration schemes for determination of trace metal concentrations using detection by electrothermal atomic absorption spectrometry and inductively coupled plasma mass spectrometry

    DEFF Research Database (Denmark)

    Hansen, Elo Harald; Wang, Jianhua

    2002-01-01

    Various preconditioning procedures encomprising appropriate separation/preconcentration schemes in order to obtain optimal sensitivity and selectivity characteristics when using electrothermal atomic absorption spectrometry (ETAAS) and inductively coupled plasma mass spectrometry (ICPMS) are pres......Various preconditioning procedures encomprising appropriate separation/preconcentration schemes in order to obtain optimal sensitivity and selectivity characteristics when using electrothermal atomic absorption spectrometry (ETAAS) and inductively coupled plasma mass spectrometry (ICPMS...

  1. Effect of coupling on scheme of hysteresis jumps in current-voltage characteristics of intrinsic Josephson junctions in high- superconductors

    OpenAIRE

    Shukrinov, Yu M.; Mahfouzi, F.

    2005-01-01

    We report the numerical calculations of the current-voltage characteristics of intrinsic Josephson junctions in high- superconductors. The charging effect at superconducting layers is taken into account. A set of equations is used to study the non-linear dynamics of the system. In framework of capacitively coupled Josephson junctions model we obtain the total number of branches using fixed initial conditions for phases and their derivatives. The influence of the coupling constant \\alpha on th...

  2. Coupled-core fluxgate magnetometer: Novel configuration scheme and the effects of a noise-contaminated external signal

    Energy Technology Data Exchange (ETDEWEB)

    Palacios, Antonio [San Diego State University, Nonlinear Dynamical Systems Group, Department of Mathematics and Statistics, San Diego, CA 92182-7720 (United States)]. E-mail: palacios@euler.sdsu.edu; Aven, John [San Diego State University, Nonlinear Dynamical Systems Group, Department of Mathematics and Statistics, San Diego, CA 92182-7720 (United States); In, Visarath [Space and Naval Warfare Systems Center San Diego, Code 2363, 53560 Hull St, San Diego, CA 92152-5001 (United States)]. E-mail: visarath@spawar.navy.mil; Longhini, Patrick [Space and Naval Warfare Systems Center San Diego, Code 2363, 53560 Hull St, San Diego, CA 92152-5001 (United States); Kho, Andy [Space and Naval Warfare Systems Center San Diego, Code 2363, 53560 Hull St, San Diego, CA 92152-5001 (United States); Neff, Joseph D. [Space and Naval Warfare Systems Center San Diego, Code 2363, 53560 Hull St, San Diego, CA 92152-5001 (United States); Bulsara, Adi [Space and Naval Warfare Systems Center San Diego, Code 2363, 53560 Hull St, San Diego, CA 92152-5001 (United States)]. E-mail: bulsara@spawar.navy.mil

    2007-07-16

    Recent theoretical and experimental work has shown that unidirectional coupling can induce oscillations in overdamped and undriven nonlinear dynamical systems that are non-oscillatory when uncoupled; in turn, this has been shown to lead to new mechanisms for weak (compared to the energy barrier height) signal detection and amplification. The potential applications include fluxgate magnetometers, electric field sensors, and arrays of Superconducting Quantum Interference Device (SQUID) rings. In the particular case of the fluxgate magnetometer, we have developed a ''coupled-core fluxgate magnetometer'' (CCFM); this device has been realized in the laboratory and its dynamics used to quantify many properties that are generic to this class of systems and coupling. The CCFM operation is underpinned by the emergent oscillatory behavior in a unidirectionally coupled ring of wound ferromagnetic cores, each of which can be treated as an overdamped bistable dynamic system when uncoupled. In particular, one can determine the regimes of existence and stability of the (coupling-induced) oscillations, and the scaling behavior of the oscillation frequency. More recently, we studied the effects of a (Gaussian) magnetic noise floor on a CCFM system realized with N=3 coupled ferromagnetic cores. In this Letter, we first introduce a variation on the basic CCFM configuration that affords a path to enhanced device sensitivity, particularly for N>=3 coupled elements. We then analyze the response of the basic CCFM configuration as well as the new setup to a dc target signal that has a small noisy component (or ''contamination'')

  3. WEB-DHM: A distributed biosphere hydrological model developed by coupling a simple biosphere scheme with a hillslope hydrological model

    Science.gov (United States)

    The coupling of land surface models and hydrological models potentially improves the land surface representation, benefiting both the streamflow prediction capabilities as well as providing improved estimates of water and energy fluxes into the atmosphere. In this study, the simple biosphere model 2...

  4. RF Jitter Modulation Alignment Sensing

    Science.gov (United States)

    Ortega, L. F.; Fulda, P.; Diaz-Ortiz, M.; Perez Sanchez, G.; Ciani, G.; Voss, D.; Mueller, G.; Tanner, D. B.

    2017-01-01

    We will present the numerical and experimental results of a new alignment sensing scheme which can reduce the complexity of alignment sensing systems currently used, while maintaining the same shot noise limited sensitivity. This scheme relies on the ability of electro-optic beam deflectors to create angular modulation sidebands in radio frequency, and needs only a single-element photodiode and IQ demodulation to generate error signals for tilt and translation degrees of freedom in one dimension. It distances itself from current techniques by eliminating the need for beam centering servo systems, quadrant photodetectors and Gouy phase telescopes. RF Jitter alignment sensing can be used to reduce the complexity in the alignment systems of many laser optical experiments, including LIGO and the ALPS experiment.

  5. Alignment validation

    Energy Technology Data Exchange (ETDEWEB)

    ALICE; ATLAS; CMS; LHCb; Golling, Tobias

    2008-09-06

    The four experiments, ALICE, ATLAS, CMS and LHCb are currently under constructionat CERN. They will study the products of proton-proton collisions at the Large Hadron Collider. All experiments are equipped with sophisticated tracking systems, unprecedented in size and complexity. Full exploitation of both the inner detector andthe muon system requires an accurate alignment of all detector elements. Alignmentinformation is deduced from dedicated hardware alignment systems and the reconstruction of charged particles. However, the system is degenerate which means the data is insufficient to constrain all alignment degrees of freedom, so the techniques are prone to converging on wrong geometries. This deficiency necessitates validation and monitoring of the alignment. An exhaustive discussion of means to validate is subject to this document, including examples and plans from all four LHC experiments, as well as other high energy experiments.

  6. A TVD SCHEME FOR INCOMPRESSIBLE FLOW COUPLED WITH DIFFERENT TURBULENCE MODLES ON A GROUND- MOUNTED SQUARE-RIB FLOW

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A finite-difference Total Variation Diminishing (TVD) numerical simulation model for coupling the Reynolds Averaged Navier-Stokes (RANS) equations, pressure-relative continuity equation and various k-ε turbulence models was developed to solve the incompressible flow based on the pseudo-compressibility method. The hyperbolicity of all these equations was studied and the discretization of the fully coupling equations with all the primal variables and source terms were made in this article. Numerical simulation for modeling the flow around a ground-mounted square rib was implemented and validated by comparing with the published wind tunnel experimental data. It is shown that such a numerical simulation method with a proper turbulence model has a very good accuracy to simulate the flow around a surface-mounted rib. It is concluded that the Renormalization Group (RNG) and Chen-Kim k-ε turbulence models have much better ability to predict the characteristics of the vortex structure and flow separation than the standard k-ε model.

  7. A fully coupled diffusion-reaction scheme for moisture sorption-desorption in an anhydride-cured epoxy resin

    KAUST Repository

    El Yagoubi, Jalal

    2012-11-01

    Thermoset materials frequently display non-classical moisture sorption behaviors. In this paper, we investigated this issue from an experimental point of view as well as in terms of modeling the water transport. We used the gravimetric technique to monitor water uptake by epoxy samples, with several thicknesses exposed to different levels of humidity during absorption and desorption tests. Our results revealed that the polymer displays a two-stage behavior with a residual amount of water that is desorbed progressively. We proposed a phenomenological reaction-diffusion scheme to describe this behavior. The model describes water transport as a competition between diffusion and the reaction, during which the local diffusivity and solubility depend on the local advancement of the reaction. We then implemented our model using COMSOL Multiphysics and identified it using a MATLAB-COMSOL optimization tool and the experimental data. We discussed the relation between the hydrophilicity of the product of the reaction and the diffusion behavior. We examined the reaction-induced modification of the water concentration field. It is worth noting that part of the phenomenology can be explained by the presence of hydrolyzable groups. © 2012 Elsevier Ltd. All rights reserved.

  8. Towards optimal alignment of protein structure distance matrices

    NARCIS (Netherlands)

    Wohlers, I.; Domingues, F.S.; Klau, G.W.

    2010-01-01

    MOTIVATION: Structural alignments of proteins are important for identification of structural similarities, homology detection and functional annotation. The structural alignment problem is well studied and computationally difficult. Many different scoring schemes for structural similarity as well as

  9. Vertically aligned nanostructure scanning probe microscope tips

    Science.gov (United States)

    Guillorn, Michael A.; Ilic, Bojan; Melechko, Anatoli V.; Merkulov, Vladimir I.; Lowndes, Douglas H.; Simpson, Michael L.

    2006-12-19

    Methods and apparatus are described for cantilever structures that include a vertically aligned nanostructure, especially vertically aligned carbon nanofiber scanning probe microscope tips. An apparatus includes a cantilever structure including a substrate including a cantilever body, that optionally includes a doped layer, and a vertically aligned nanostructure coupled to the cantilever body.

  10. Aligning molecules with intense nonresonant laser fields

    DEFF Research Database (Denmark)

    Larsen, J.J.; Safvan, C.P.; Sakai, H.;

    1999-01-01

    Molecules in a seeded supersonic beam are aligned by the interaction between an intense nonresonant linearly polarized laser field and the molecular polarizability. We demonstrate the general applicability of the scheme by aligning I2, ICl, CS2, CH3I, and C6H5I molecules. The alignment is probed...... by mass selective two dimensional imaging of the photofragment ions produced by femtosecond laser pulses. Calculations on the degree of alignment of I2 are in good agreement with the experiments. We discuss some future applications of laser aligned molecules....

  11. Beyond Alignment

    DEFF Research Database (Denmark)

    Beyond Alignment: Applying Systems Thinking to Architecting Enterprises is a comprehensive reader about how enterprises can apply systems thinking in their enterprise architecture practice, for business transformation and for strategic execution. The book's contributors find that systems thinking...... is a valuable way of thinking about the viable enterprise and how to architect it....

  12. Coupled lattice Boltzmann method for simulating electrokinetic flows: A localized scheme for the Nernst-Plank model

    Science.gov (United States)

    Yoshida, Hiroaki; Kinjo, Tomoyuki; Washizu, Hitoshi

    2014-10-01

    We present a coupled lattice Boltzmann method (LBM) to solve a set of model equations for electrokinetic flows in micro-/nano-channels. The model consists of the Poisson equation for the electrical potential, the Nernst-Planck equation for the ion concentration, and the Navier-Stokes equation for the flows of the electrolyte solution. In the proposed LBM, the electrochemical migration and the convection of the electrolyte solution contributing to the ion flux are incorporated into the collision operator, which maintains the locality of the algorithm inherent to the original LBM. Furthermore, the Neumann-type boundary condition at the solid/liquid interface is then correctly imposed. In order to validate the present LBM, we consider an electro-osmotic flow in a slit between two charged infinite parallel plates, and the results of LBM computation are compared to the analytical solutions. Good agreement is obtained in the parameter range considered herein, including the case in which the nonlinearity of the Poisson equation due to the large potential variation manifests itself. We also apply the method to a two-dimensional problem of a finite-length microchannel with an entry and an exit. The steady state, as well as the transient behavior, of the electro-osmotic flow induced in the microchannel is investigated. It is shown that, although no external pressure difference is imposed, the presence of the entry and exit results in the occurrence of the local pressure gradient that causes a flow resistance reducing the magnitude of the electro-osmotic flow.

  13. Distributed Interference Alignment with Low Overhead

    CERN Document Server

    Ma, Yanjun; Chen, Rui

    2011-01-01

    Based on closed-form interference alignment (IA) solutions, a low overhead distributed interference alignment (LOIA) scheme is proposed in this paper for the $K$-user SISO interference channel, and extension to multiple antenna scenario is also considered. Compared with the iterative interference alignment (IIA) algorithm proposed by Gomadam et al., the overhead is greatly reduced. Simulation results show that the IIA algorithm is strictly suboptimal compared with our LOIA algorithm in the overhead-limited scenario.

  14. Downlink Interference Alignment

    CERN Document Server

    Suh, Changho; Tse, David

    2010-01-01

    We develop an interference alignment (IA) technique for a downlink cellular system. In the uplink, IA schemes need channel-state-information exchange across base-stations of different cells, but our downlink IA technique requires feedback only within a cell. As a result, the proposed scheme can be implemented with a few changes to an existing cellular system where the feedback mechanism (within a cell) is already being considered for supporting multi-user MIMO. Not only is our proposed scheme implementable with little effort, it can in fact provide substantial gain especially when interference from a dominant interferer (base-station) is significantly stronger than the remaining interference: it is shown that in the two-isolated cell layout, our scheme provides four-fold gain in throughput performance over a standard multi-user MIMO technique. We show through simulations that our technique provides respectable gain under more realistic scenarios: it gives approximately 55% and 20% gain for a linear cell layou...

  15. Integrating peatlands into the coupled Canadian Land Surface Scheme (CLASS) v3.6 and the Canadian Terrestrial Ecosystem Model (CTEM) v2.0

    Science.gov (United States)

    Wu, Yuanqiao; Verseghy, Diana L.; Melton, Joe R.

    2016-08-01

    Peatlands, which contain large carbon stocks that must be accounted for in the global carbon budget, are poorly represented in many earth system models. We integrated peatlands into the coupled Canadian Land Surface Scheme (CLASS) and the Canadian Terrestrial Ecosystem Model (CTEM), which together simulate the fluxes of water, energy, and CO2 at the land surface-atmosphere boundary in the family of Canadian Earth system models (CanESMs). New components and algorithms were added to represent the unique features of peatlands, such as their characteristic ground floor vegetation (mosses), the slow decomposition of carbon in the water-logged soils and the interaction between the water, energy, and carbon cycles. This paper presents the modifications introduced into the CLASS-CTEM modelling framework together with site-level evaluations of the model performance for simulated water, energy and carbon fluxes at eight different peatland sites. The simulated daily gross primary production (GPP) and ecosystem respiration are well correlated with observations, with values of the Pearson correlation coefficient higher than 0.8 and 0.75 respectively. The simulated mean annual net ecosystem production at the eight test sites is 87 g C m-2 yr-1, which is 22 g C m-2 yr-1 higher than the observed annual mean. The general peatland model compares well with other site-level and regional-level models for peatlands, and is able to represent bogs and fens under a range of climatic and geographical conditions.

  16. FOGSAA: Fast Optimal Global Sequence Alignment Algorithm

    Science.gov (United States)

    Chakraborty, Angana; Bandyopadhyay, Sanghamitra

    2013-04-01

    In this article we propose a Fast Optimal Global Sequence Alignment Algorithm, FOGSAA, which aligns a pair of nucleotide/protein sequences faster than any optimal global alignment method including the widely used Needleman-Wunsch (NW) algorithm. FOGSAA is applicable for all types of sequences, with any scoring scheme, and with or without affine gap penalty. Compared to NW, FOGSAA achieves a time gain of (70-90)% for highly similar nucleotide sequences (> 80% similarity), and (54-70)% for sequences having (30-80)% similarity. For other sequences, it terminates with an approximate score. For protein sequences, the average time gain is between (25-40)%. Compared to three heuristic global alignment methods, the quality of alignment is improved by about 23%-53%. FOGSAA is, in general, suitable for aligning any two sequences defined over a finite alphabet set, where the quality of the global alignment is of supreme importance.

  17. 一种耦合短路线加载的圆极化天线方案%A circularly polarized antenna scheme coupled with short route

    Institute of Scientific and Technical Information of China (English)

    陈智达; 廖林; 彭顺全

    2016-01-01

    提出在微带贴片辐射面上加载等长耦合短路线获得小型化或者小介电常数的圆极化微带天线设计方案,设计了两款双馈的北斗B3天线验证了该方法的有效性。HFSS仿真结果表明,该天线工作于1.268 GHz,单元应用于北斗自适应阵内,底盘尺寸直径为220 mm,传统天线采用50×50,ε=10的介质板,增益为5.7 dB。本设计方案1采用35×35,ε=10的介质板,增益6.0 dB,尺寸压缩了30%;方案2采用50×50,ε=6的介质板,增益为7.1 dB。介电常数减少了40%。与传统的微带圆极化天线相比,该设计方案可以根据实际选用更高增益的天线方案以及更小尺寸的天线方案。%In this paper, circularly polarized microstrip patch antenna has been widely used in wireless communications. As loading on the coupling short of microstrip patch radiating long line to get circular polarization microstrip antenna design miniaturization or a small dielectric constant, is proposed two double-fed antenna Compass B3 is designed to verify the effectiveness. HFSS simulation results show that the antenna in 1.268GHz, unit applies adaptive array within Compass, chassis size diameter of 220mm, a traditional antenna is 50 ×50,ε= dielectric plate 10, a gain of 5.7 dB. The design uses a 35×35,ε= dielectric plate 10, the gain 6.0 dB, size 30% compression; Scheme 2 using the dielectric plate 50 ×50,ε= 6, the gain is 7.1 dB reduced dielectric constant 40%. Compared with the conventional circular polarization microstrip antenna, the design can be chosen according to the actual programs and higher gain antenna with smaller size antenna scheme.

  18. Evaluating mirror alignment systems using the optical sensing matrix

    Energy Technology Data Exchange (ETDEWEB)

    Mantovani, M [Universita di Siena, INFN Pisa (Italy); Freise, A [School of Physics and Astronomy, University of Birmingham, Edgbaston, Birmingham B15 2TT (United Kingdom)], E-mail: mantovan@ego-gw.it

    2008-07-15

    The most sensitive gravitational-wave detectors today are based on large-scale laser interferometers whose optics are suspended from pendulums to decouple the instrument from seismic motion. Complex control systems are required to set and maintain the microscopic position of each mirror at a precisely defined value. Such control systems use the interferometer signals as input signals, and ideally it is designed such that the degrees of freedom (mirror positions) are well decoupled in the interferometer signals. However, this is not always feasible, in particular the mirror alignment control signals in interferometric gravitational wave detectors often show strong couplings between the different degrees of freedom. In this paper we will describe a simple and powerful method to quantify in advance the performances of an alignment control system by analyzing the optical matrix of the proposed read-out system. We will motivate the method using a Fabry-Perot cavity as an example, and we will further present results for the Virgo alignment system where this method was used to characterize and improve the alignment sensing scheme.

  19. 离心压缩机组联轴器对中精度的影响因素%Influencing Factors of Shaft Coupling Alignment Accuracy of Centrifugal Compressors

    Institute of Scientific and Technical Information of China (English)

    王志春; 韩建伟

    2013-01-01

      离心式压缩机组在安装和维修过程中自始至终存在着联轴器找正对中问题,联轴器对中精度的高低对机组运行状况、生产效率有着重大的影响。从联轴器类型及安装质量和检测仪器仪表精度、质量等9个方面,来阐述离心压缩机组联轴器找正对中精度的影响因素。%There is a problem of shaft coupling alignment accuracy in complete installation and maintenance procedure of centrifugal compressors, the problem has significant effect on operation and production efficiency of the centrifugal compressors. In this article, influencing factors of shaft coupling alignment accuracy of centrifugal compressors were analyzed from nine aspects.

  20. Instantaneous-to-daily GPP upscaling schemes based on a coupled photosynthesis-stomatal conductance model: correcting the overestimation of GPP by directly using daily average meteorological inputs.

    Science.gov (United States)

    Wang, Fumin; Gonsamo, Alemu; Chen, Jing M; Black, T Andrew; Zhou, Bin

    2014-11-01

    Daily canopy photosynthesis is usually temporally upscaled from instantaneous (i.e., seconds) photosynthesis rate. The nonlinear response of photosynthesis to meteorological variables makes the temporal scaling a significant challenge. In this study, two temporal upscaling schemes of daily photosynthesis, the integrated daily model (IDM) and the segmented daily model (SDM), are presented by considering the diurnal variations of meteorological variables based on a coupled photosynthesis-stomatal conductance model. The two models, as well as a simple average daily model (SADM) with daily average meteorological inputs, were validated using the tower-derived gross primary production (GPP) to assess their abilities in simulating daily photosynthesis. The results showed IDM closely followed the seasonal trend of the tower-derived GPP with an average RMSE of 1.63 g C m(-2) day(-1), and an average Nash-Sutcliffe model efficiency coefficient (E) of 0.87. SDM performed similarly to IDM in GPP simulation but decreased the computation time by >66%. SADM overestimated daily GPP by about 15% during the growing season compared to IDM. Both IDM and SDM greatly decreased the overestimation by SADM, and improved the simulation of daily GPP by reducing the RMSE by 34 and 30%, respectively. The results indicated that IDM and SDM are useful temporal upscaling approaches, and both are superior to SADM in daily GPP simulation because they take into account the diurnally varying responses of photosynthesis to meteorological variables. SDM is computationally more efficient, and therefore more suitable for long-term and large-scale GPP simulations.

  1. TSGC and JSC Alignment

    Science.gov (United States)

    Sanchez, Humberto

    2013-01-01

    NASA and the SGCs are, by design, intended to work closely together and have synergistic Vision, Mission, and Goals. The TSGC affiliates and JSC have been working together, but not always in a concise, coordinated, nor strategic manner. Today we have a couple of simple ideas to present about how TSGC and JSC have started to work together in a more concise, coordinated, and strategic manner, and how JSC and non-TSG Jurisdiction members have started to collaborate: Idea I: TSGC and JSC Technical Alignment Idea II: Concept of Clusters.

  2. CAMS云微物理方案的改进及与WRF模式耦合的个例研究%Improved CAMS cloud microphysics scheme and numerical experiment coupled with WRF model

    Institute of Scientific and Technical Information of China (English)

    高文华; 赵凤生; 胡志晋; 周青

    2012-01-01

    本文在中国气象科学研究院(CAMS)双参数云微物理方案的基础上,增加气溶胶粒子的活化过程,改进原方案中的水汽混合比、云水混合比及云滴数浓度的预报方程,实现对各种水成物(包括云水)的混合比和数浓度的预报.此外,改进后的CAMS云方案被成功耦合到了WRF v3.1中尺度模式,本文利用耦合模式对2009年4月23~24日发生在我国北方地区的一次降水天气过程进行了模拟,将新方案的模拟结果与WRF自带的3个微物理方案进行了比较.结果显示,新方案能够合理地描述地面降水特征,其模拟的雨带分布范围与实测接近,降水中心的强度和位置优于其他3个方案.新方案模拟的云滴数浓度与WDM6方案基本一致,表明加入的气溶胶活化过程是合理的.新方案模拟的其他水成物粒子数浓度与Morrison方案相比有时会有量级的差别,说明粒子数浓度的模拟目前还存在着很大的不确定性,这也是云微物理模式进一步发展的难点.%The Chinese Academy of Meteorological Sciences (CAMS) two-moment bulk microphysics scheme was employed in this study, and a new parameterization approach to simulate the heterogeneous droplet activation was introduced into the scheme. The proposed scheme predicts both the mixing ratio and the number concentration for five hydrometeor species (cloud water, rain, cloud ice, snow, and graupel). Moreover, the improved CAMS scheme was coupled with the Weather Research and Forecasting model (WRF v3. 1), which makes it possible to investigate the effects of aerosol on clouds and precipitation. The rain event occurring on 23~ 24 April 2009 in north China was simulated using the coupled CAMS scheme and threesophisticated microphysics schemes in the WRF model. Results showed that the new scheme performed reasonably well in describing the characteristic of precipitation and the microphysics structure of cloud. The spatial pattern of precipitation, the

  3. Interference Alignment via Improved Subspace Conditioning

    CERN Document Server

    Kim, Douglas

    2010-01-01

    For the K user, single input single output (SISO), frequency selective interference channel, a new low complexity transmit beamforming design that improves the achievable sum rate is presented. Jointly employing the interference alignment (IA) scheme presented by Cadambe and Jafar in [1] and linear minimum mean square error (MMSE) decoding at the transmitters and receivers, respectively, the new IA precoding design improves the average sum rate while preserving the achievable degrees of freedom of the Cadambe and Jafar scheme, K/2.

  4. Colour schemes

    DEFF Research Database (Denmark)

    van Leeuwen, Theo

    2013-01-01

    This chapter presents a framework for analysing colour schemes based on a parametric approach that includes not only hue, value and saturation, but also purity, transparency, luminosity, luminescence, lustre, modulation and differentiation....

  5. A novel approach to multiple sequence alignment using hadoop data grids.

    Science.gov (United States)

    Sudha Sadasivam, G; Baktavatchalam, G

    2010-01-01

    Multiple alignment of protein sequences helps to determine evolutionary linkage and to predict molecular structures. The factors to be considered while aligning multiple sequences are speed and accuracy of alignment. Although dynamic programming algorithms produce accurate alignments, they are computation intensive. In this paper we propose a time efficient approach to sequence alignment that also produces quality alignment. The dynamic nature of the algorithm coupled with data and computational parallelism of hadoop data grids improves the accuracy and speed of sequence alignment. The principle of block splitting in hadoop coupled with its scalability facilitates alignment of very large sequences.

  6. Vibrating wire alignment technique

    CERN Document Server

    Xiao-Long, Wang; lei, Wu; Chun-Hua, Li

    2013-01-01

    Vibrating wire alignment technique is a kind of method which through measuring the spatial distribution of magnetic field to do the alignment and it can achieve very high alignment accuracy. Vibrating wire alignment technique can be applied for magnet fiducialization and accelerator straight section components alignment, it is a necessary supplement for conventional alignment method. This article will systematically expound the international research achievements of vibrating wire alignment technique, including vibrating wire model analysis, system frequency calculation, wire sag calculation and the relation between wire amplitude and magnetic induction intensity. On the basis of model analysis this article will introduce the alignment method which based on magnetic field measurement and the alignment method which based on amplitude and phase measurement. Finally, some basic questions will be discussed and the solutions will be given.

  7. Interference Alignment for Secrecy

    CERN Document Server

    Koyluoglu, Onur Ozan; Lai, Lifeng; Poor, H Vincent

    2008-01-01

    This paper studies the frequency/time selective $K$-user Gaussian interference channel with secrecy constraints. Two distinct models, namely the interference channel with confidential messages and the one with an external eavesdropper, are analyzed. The key difference between the two models is the lack of channel state information (CSI) about the external eavesdropper. Using interference alignment along with secrecy pre-coding, it is shown that each user can achieve non-zero secure Degrees of Freedom (DoF) for both cases. More precisely, the proposed coding scheme achieves $\\frac{K-2}{2K-2}$ secure DoF {\\em with probability one} per user in the confidential messages model. For the external eavesdropper scenario, on the other hand, it is shown that each user can achieve $\\frac{K-2}{2K}$ secure DoF {\\em in the ergodic setting}. Remarkably, these results establish the {\\em positive impact} of interference on the secrecy capacity region of wireless networks.

  8. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G.Gomez.

    Since June of 2009, the muon alignment group has focused on providing new alignment constants and on finalizing the hardware alignment reconstruction. Alignment constants for DTs and CSCs were provided for CRAFT09 data reprocessing. For DT chambers, the track-based alignment was repeated using CRAFT09 cosmic ray muons and validated using segment extrapolation and split cosmic tools. One difference with respect to the previous alignment is that only five degrees of freedom were aligned, leaving the rotation around the local x-axis to be better determined by the hardware system. Similarly, DT chambers poorly aligned by tracks (due to limited statistics) were aligned by a combination of photogrammetry and hardware-based alignment. For the CSC chambers, the hardware system provided alignment in global z and rotations about local x. Entire muon endcap rings were further corrected in the transverse plane (global x and y) by the track-based alignment. Single chamber track-based alignment suffers from poor statistic...

  9. 涡流问题基于C-N差分格式的有限元耦合算法%A Finite Element Coupled Algorithm Based on C-N Differential Scheme for Eddy Current Problem

    Institute of Scientific and Technical Information of China (English)

    王艳芳; 陈涛; 吴红梅; 康彤

    2011-01-01

    Fully discrete potential-based finite element methods called A- methods are used to solve a transient eddy current problem in a three-dimensional convex bounded polyhedron.Using A- methods,fully discrete coupled Crank-Nicholson numerical scheme is developed.The existence and uniqueness of solution for this scheme together with the energy-norm error estimates are provided.To verify the validity of this scheme,some computer simulations are performed for the model from TEAM Workshop Problem 7.%基于势的全离散有限元法常用于解决三维凸有界多边形区域的瞬时涡流问题。本文采用A-法的全离散Crank-Nicholson格式耦合算法,给出能量模误差估计下其解的存在唯一性,并通过TEAM Workshop问题7的数值结果,验证此算法的有效性。

  10. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G. Gomez and J. Pivarski

    2011-01-01

    Alignment efforts in the first few months of 2011 have shifted away from providing alignment constants (now a well established procedure) and focussed on some critical remaining issues. The single most important task left was to understand the systematic differences observed between the track-based (TB) and hardware-based (HW) barrel alignments: a systematic difference in r-φ and in z, which grew as a function of z, and which amounted to ~4-5 mm differences going from one end of the barrel to the other. This difference is now understood to be caused by the tracker alignment. The systematic differences disappear when the track-based barrel alignment is performed using the new “twist-free” tracker alignment. This removes the largest remaining source of systematic uncertainty. Since the barrel alignment is based on hardware, it does not suffer from the tracker twist. However, untwisting the tracker causes endcap disks (which are aligned ...

  11. Tracking alignment from the moment of inertia tensor (TRAMITE) of biomolecules in neutral dilute liquid crystal solutions.

    Science.gov (United States)

    Azurmendi, Hugo F; Bush, C Allen

    2002-03-20

    NMR residual dipolar couplings between couple of nuclei PQ, (1)D(PQ), measured on neutral dilute liquid crystal solutions, provide valuable long-range structural information of biomolecules. An accurate and simple method for the prediction of the alignment produced as consequence of sterical interactions between the solute and the bicelles is proposed called TRacking Alignment from Moment of Inertia TEnsor--TRAMITE. The method use the information encoded in the moment of inertia of the molecules to calculate the orientation tensor and predict the (1)D(PQ) values. Examples on proteins and oligosaccharides are presented which cover a wide range of sizes and shapes, along with a scheme for the application of the method to the analysis of flexible molecules.

  12. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G.Gomez

    2010-01-01

    The main developments in muon alignment since March 2010 have been the production, approval and deployment of alignment constants for the ICHEP data reprocessing. In the barrel, a new geometry, combining information from both hardware and track-based alignment systems, has been developed for the first time. The hardware alignment provides an initial DT geometry, which is then anchored as a rigid solid, using the link alignment system, to a reference frame common to the tracker. The “GlobalPositionRecords” for both the Tracker and Muon systems are being used for the first time, and the initial tracker-muon relative positioning, based on the link alignment, yields good results within the photogrammetry uncertainties of the Tracker and alignment ring positions. For the first time, the optical and track-based alignments show good agreement between them; the optical alignment being refined by the track-based alignment. The resulting geometry is the most complete to date, aligning all 250 DTs, ...

  13. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    Z. Szillasi and G. Gomez.

    2013-01-01

    When CMS is opened up, major components of the Link and Barrel Alignment systems will be removed. This operation, besides allowing for maintenance of the detector underneath, is needed for making interventions that will reinforce the alignment measurements and make the operation of the alignment system more reliable. For that purpose and also for their general maintenance and recalibration, the alignment components will be transferred to the Alignment Lab situated in the ISR area. For the track-based alignment, attention is focused on the determination of systematic uncertainties, which have become dominant, since now there is a large statistics of muon tracks. This will allow for an improved Monte Carlo misalignment scenario and updated alignment position errors, crucial for high-momentum muon analysis such as Z′ searches.

  14. Research on SINS Alignment Algorithm Based on FIR Filters

    Institute of Scientific and Technical Information of China (English)

    LIAN Jun-xiang; HU De-wen; WU Yuan-xin; HU Xiao-ping

    2007-01-01

    An inertial frame based alignment (IFBA) method is presented, especially for the applications on a rocking platform, e.g., marine applications. Defining the initial body frame as the inertial frame, the IFBA method achieves the alignment by virtue of a cascade of low-pass FIR filters, which attenuate the disturbing acceleration and maintain the gravity vector. The aligning time rests with the orders of the FIR filter group, and the method is suitable for large initial misali gnment case. An alignment scheme comprising a coarse phase by the IFBA method an d a fine phase by a Kalman filter is presented. Both vehicle-based and ship-based alignment experiments were carried out. The results show that the proposed scheme converges much faster than the traditional method at no cost of precision and also works well under any large initial misalignment.

  15. Vibrational configuration interaction using a tiered multimode scheme and tests of approximate treatments of vibrational angular momentum coupling: a case study for methane.

    Science.gov (United States)

    Mielke, Steven L; Chakraborty, Arindam; Truhlar, Donald G

    2013-08-15

    We present vibrational configuration interaction calculations employing the Watson Hamiltonian and a multimode expansion. Results for the lowest 36 eigenvalues of the zero total angular momentum rovibrational spectrum of methane agree with the accurate benchmarks of Wang and Carrington to within a mean unsigned deviation of 0.68, 0.033, and 0.014 cm(-1) for 4-mode, 5-mode, and 6-mode representations, respectively. We note that in the case of the 5-mode results, this is a factor of 10 better agreement than for 5-mode calculations reported earlier by Wu, Huang, Carter, and Bowman for the same set of eigenvalues, which indicates that the multimode expansion is even more rapidly convergent than previously demonstrated. Our largest calculations employ a tiered approach with matrix elements treated using a variable-order multimode expansion with orders ranging from 4-mode to 7-mode; strategies for assigning matrix elements to particular multimode tiers are discussed. Improvements of 7-mode coupling over 6-mode coupling are small (averaging 0.002 cm(-1) for the first 36 eigenvalues) suggesting that 7-mode coupling is sufficient to fully converge the results. A number of approximate treatments of the computationally expensive vibrational angular momentum terms are explored. The use of optimized vibrational quadratures allows rapid integration of the matrix elements, especially the vibrational angular momentum terms, which require significantly fewer quadrature points than are required to integrate the potential. We assign the lowest 243 states and compare our results to those of Wang and Carrington, who provided assignments for the same set of states. Excellent agreement is observed for most states, but our results are lower for some of the higher-energy states by as much as 20 cm(-1), with the largest deviations being for the states with six quanta of excitation in the F2 bends, suggesting that the earlier results were not fully converged with respect to the basis set. We

  16. Ontology alignment with OLA

    OpenAIRE

    Euzenat, Jérôme; Loup, David; Touzani, Mohamed; Valtchev, Petko

    2004-01-01

    euzenat2004d; International audience; Using ontologies is the standard way to achieve interoperability of heterogeneous systems within the Semantic web. However, as the ontologies underlying two systems are not necessarily compatible, they may in turn need to be aligned. Similarity-based approaches to alignment seems to be both powerful and flexible enough to match the expressive power of languages like OWL. We present an alignment tool that follows the similarity-based paradigm, called OLA. ...

  17. Economic evaluation of conditional cash transfer scheme for postponement of first pregnancy in newly married couples in Satara district of Maharashtra (India

    Directory of Open Access Journals (Sweden)

    Asha K Pratinidhi

    2013-10-01

    Full Text Available Background: Since 2007, Satara district is implementing a voluntary conditional cash transfer scheme named “Second Honeymoon Package” (SHP for postponement of first pregnancy. This study was undertaken to evaluate it's effectiveness in preventing pregnancies, utilizing the years for learning or betterment in jobs. Cost-effectiveness analysis was undertaken from government's viewpoint and that from beneficiary's viewpoint. Objectives: To perform the economic evaluation of second honeymoon package programme from the perspective of beneficiaries and that of Government of Maharashtra during the defined time horizon. To determine the targets to be achieved so as to make the programme cost- effective. Materials and Methods: This was an evaluation study of a community based interventional programme. This study employed quasi-experimental study design. Economic evaluation was conducted from the perspective of Government of Maharashtra and that of beneficiaries'. Costs and consequences SHP were evaluated in comparison with those of routine family welfare programme. Sensitivity analysis was done using Treeage Pro® version 2009 software. Results: Cost for participation in programme was Rs. 965888/268 person years of productivity. Cost of not participating in the Second honeymoon programme but availing routine family planning services was Rs. 298902/133 person years gained. Rankings analysis showed that no strategies were clearly dominated by any other. Extended dominance report indicates no strategies were eliminated by extended dominance. Incremental cost-effectiveness ratio was Rs.4920/person year of productivity. Conclusions: The SHP is cost effective at high success and productivity rates. The success rate of postponement of first pregnancy was 51.4%. Postponement of pregnancy by 2 years provides 45% chances of productive utilization of time.

  18. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G.Gomez

    2010-01-01

    Most of the work in muon alignment since December 2009 has focused on the geometry reconstruction from the optical systems and improvements in the internal alignment of the DT chambers. The barrel optical alignment system has progressively evolved from reconstruction of single active planes to super-planes (December 09) to a new, full barrel reconstruction. Initial validation studies comparing this full barrel alignment at 0T with photogrammetry provide promising results. In addition, the method has been applied to CRAFT09 data, and the resulting alignment at 3.8T yields residuals from tracks (extrapolated from the tracker) which look smooth, suggesting a good internal barrel alignment with a small overall offset with respect to the tracker. This is a significant improvement, which should allow the optical system to provide a start-up alignment for 2010. The end-cap optical alignment has made considerable progress in the analysis of transfer line data. The next set of alignment constants for CSCs will there...

  19. Plasmonic Properties of Vertically Aligned Nanowire Arrays

    Directory of Open Access Journals (Sweden)

    Hua Qi

    2012-01-01

    Full Text Available Nanowires (NWs/Ag sheath composites were produced to investigate plasmonic coupling between vertically aligned NWs for surface-enhanced Raman scattering (SERS applications. In this investigation, two types of vertical NW arrays were studied; those of ZnO NWs grown on nanosphere lithography patterned sapphire substrate via vapor-liquid-solid (VLS mechanism and Si NW arrays produced by wet chemical etching. Both types of vertical NW arrays were coated with a thin layer of silver by electroless silver plating for SERS enhancement studies. The experimental results show extremely strong SERS signals due to plasmonic coupling between the NWs, which was verified by COMSOL electric field simulations. We also compared the SERS enhancement intensity of aligned and random ZnO NWs, indicating that the aligned NWs show much stronger and repeatable SERS signal than those grown in nonaligned geometries.

  20. Mounting and Alignment of IXO Mirror Segments

    Science.gov (United States)

    Chan, Kai-Wing; Zhang, William; Evans, Tyler; McClelland, Ryan; Hong, Melinda; Mazzarella, James; Saha, Timo; Jalota, Lalit; Olsen, Lawrence; Byron, Glenn

    2010-01-01

    A suspension-mounting scheme is developed for the IXO (International X-ray Observatory) mirror segments in which the figure of the mirror segment is preserved in each stage of mounting. The mirror, first fixed on a thermally compatible strongback, is subsequently transported, aligned and transferred onto its mirror housing. In this paper, we shall outline the requirement, approaches, and recent progress of the suspension mount processes.

  1. Alignment Mirror Mechanisms for Space Use

    Science.gov (United States)

    Jau, Bruno M.; McKinney, Colin M.; Smythe, Robert F.; Palmer, Dean

    2011-01-01

    The paper describes an optical Alignment Mirror Mechanism (AMM), and discusses its control scheme. The mirror's angular positioning accuracy requirement is +/- 0.2 arc-sec. This requires the mirror's linear positioning actuators to have a positioning accuracy of +/- 109 nm to enable the mirror to meet the angular tip/tilt accuracy requirement. Demonstrated capabilities are +/- 35 nm linear positioning capability at the actuator, which translates into +/- 0.07 arc-sec angular mirror positioning accuracy.

  2. Opportunistic Interference Alignment in MIMO Interference Channels

    CERN Document Server

    Perlaza, Samir Medina; Lasaulce, Samson; Chaufray, Jean Marie

    2008-01-01

    We present two interference alignment techniques such that an opportunistic point-to-point multiple input multiple output (MIMO) link can reuse, without generating any additional interference, the same frequency band of a similar pre-existing primary link. In this scenario, we exploit the fact that under power constraints, although each radio maximizes independently its rate by water-filling on their channel transfer matrix singular values, frequently, not all of them are used. Therefore, by aligning the interference of the opportunistic radio it is possible to transmit at a significant rate while insuring zero-interference on the pre-existing link. We propose a linear pre-coder for a perfect interference alignment and a power allocation scheme which maximizes the individual data rate of the secondary link. Our numerical results show that significant data rates are achieved even for a reduced number of antennas.

  3. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G.Gomez

    2011-01-01

    The Muon Alignment work now focuses on producing a new track-based alignment with higher track statistics, making systematic studies between the results of the hardware and track-based alignment methods and aligning the barrel using standalone muon tracks. Currently, the muon track reconstruction software uses a hardware-based alignment in the barrel (DT) and a track-based alignment in the endcaps (CSC). An important task is to assess the muon momentum resolution that can be achieved using the current muon alignment, especially for highly energetic muons. For this purpose, cosmic ray muons are used, since the rate of high-energy muons from collisions is very low and the event statistics are still limited. Cosmics have the advantage of higher statistics in the pT region above 100 GeV/c, but they have the disadvantage of having a mostly vertical topology, resulting in a very few global endcap muons. Only the barrel alignment has therefore been tested so far. Cosmic muons traversing CMS from top to bottom are s...

  4. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    Gervasio Gomez

    The main progress of the muon alignment group since March has been in the refinement of both the track-based alignment for the DTs and the hardware-based alignment for the CSCs. For DT track-based alignment, there has been significant improvement in the internal alignment of the superlayers inside the DTs. In particular, the distance between superlayers is now corrected, eliminating the residual dependence on track impact angles, and good agreement is found between survey and track-based corrections. The new internal geometry has been approved to be included in the forthcoming reprocessing of CRAFT samples. The alignment of DTs with respect to the tracker using global tracks has also improved significantly, since the algorithms use the latest B-field mapping, better run selection criteria, optimized momentum cuts, and an alignment is now obtained for all six degrees of freedom (three spatial coordinates and three rotations) of the aligned DTs. This work is ongoing and at a stage where we are trying to unders...

  5. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G. Gomez

    Since December, the muon alignment community has focused on analyzing the data recorded so far in order to produce new DT and CSC Alignment Records for the second reprocessing of CRAFT data. Two independent algorithms were developed which align the DT chambers using global tracks, thus providing, for the first time, a relative alignment of the barrel with respect to the tracker. These results are an important ingredient for the second CRAFT reprocessing and allow, for example, a more detailed study of any possible mis-modelling of the magnetic field in the muon spectrometer. Both algorithms are constructed in such a way that the resulting alignment constants are not affected, to first order, by any such mis-modelling. The CSC chambers have not yet been included in this global track-based alignment due to a lack of statistics, since only a few cosmics go through the tracker and the CSCs. A strategy exists to align the CSCs using the barrel as a reference until collision tracks become available. Aligning the ...

  6. SPEAR3 Construction Alignment

    Energy Technology Data Exchange (ETDEWEB)

    LeCocq, Catherine; Banuelos, Cristobal; Fuss, Brian; Gaudreault, Francis; Gaydosh, Michael; Griffin, Levirt; Imfeld, Hans; McDougal, John; Perry, Michael; Rogers,; /SLAC

    2005-08-17

    An ambitious seven month shutdown of the existing SPEAR2 synchrotron radiation facility was successfully completed in March 2004 when the first synchrotron light was observed in the new SPEAR3 ring, SPEAR3 completely replaced SPEAR2 with new components aligned on a new highly-flat concrete floor. Devices such as magnets and vacuum chambers had to be fiducialized and later aligned on girder rafts that were then placed into the ring over pre-aligned support plates. Key to the success of aligning this new ring was to ensure that the new beam orbit matched the old SPEAR2 orbit so that existing experimental beamlines would not have to be reoriented. In this presentation a pictorial summary of the Alignment Engineering Group's surveying tasks for the construction of the SPEAR3 ring is provided. Details on the networking and analysis of various surveys throughout the project can be found in the accompanying paper.

  7. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G. Gomez

    2011-01-01

    A new set of muon alignment constants was approved in August. The relative position between muon chambers is essentially unchanged, indicating good detector stability. The main changes concern the global positioning of the barrel and of the endcap rings to match the new Tracker geometry. Detailed studies of the differences between track-based and optical alignment of DTs have proven to be a valuable tool for constraining Tracker alignment weak modes, and this information is now being used as part of the alignment procedure. In addition to the “split-cosmic” analysis used to investigate the muon momentum resolution at high momentum, a new procedure based on reconstructing the invariant mass of di-muons from boosted Zs is under development. Both procedures show an improvement in the momentum precision of Global Muons with respect to Tracker-only Muons. Recent developments in track-based alignment include a better treatment of the tails of residual distributions and accounting for correla...

  8. Physics of Grain Alignment

    CERN Document Server

    Lazarian, A

    2000-01-01

    Aligned grains provide one of the easiest ways to study magnetic fields in diffuse gas and molecular clouds. How reliable our conclusions about the inferred magnetic field depends critically on our understanding of the physics of grain alignment. Although grain alignment is a problem of half a century standing recent progress achieved in the field makes us believe that we are approaching the solution of this mystery. I review basic physical processes involved in grain alignment and show why mechanisms that were favored for decades do not look so promising right now. I also discuss why the radiative torque mechanism ignored for more than 20 years looks right now the most powerful means of grain alignment.

  9. Sample-Align-D: A High Performance Multiple Sequence Alignment System using Phylogenetic Sampling and Domain Decomposition

    CERN Document Server

    Saeed, Fahad

    2009-01-01

    Multiple Sequence Alignment (MSA) is one of the most computationally intensive tasks in Computational Biology. Existing best known solutions for multiple sequence alignment take several hours (in some cases days) of computation time to align, for example, 2000 homologous sequences of average length 300. Inspired by the Sample Sort approach in parallel processing, in this paper we propose a highly scalable multiprocessor solution for the MSA problem in phylogenetically diverse sequences. Our method employs an intelligent scheme to partition the set of sequences into smaller subsets using kmer count based similarity index, referred to as k-mer rank. Each subset is then independently aligned in parallel using any sequential approach. Further fine tuning of the local alignments is achieved using constraints derived from a global ancestor of the entire set. The proposed Sample-Align-D Algorithm has been implemented on a cluster of workstations using MPI message passing library. The accuracy of the proposed solutio...

  10. Fourier-based automatic alignment for improved Visual Cryptography schemes.

    Science.gov (United States)

    Machizaud, Jacques; Chavel, Pierre; Fournel, Thierry

    2011-11-01

    In Visual Cryptography, several images, called "shadow images", that separately contain no information, are overlapped to reveal a shared secret message. We develop a method to digitally register one printed shadow image acquired by a camera with a purely digital shadow image, stored in memory. Using Fourier techniques derived from Fourier Optics concepts, the idea is to enhance and exploit the quasi periodicity of the shadow images, composed by a random distribution of black and white patterns on a periodic sampling grid. The advantage is to speed up the security control or the access time to the message, in particular in the cases of a small pixel size or of large numbers of pixels. Furthermore, the interest of visual cryptography can be increased by embedding the initial message in two shadow images that do not have identical mathematical supports, making manual registration impractical. Experimental results demonstrate the successful operation of the method, including the possibility to directly project the result onto the printed shadow image.

  11. Finite-volume scheme for anisotropic diffusion

    Energy Technology Data Exchange (ETDEWEB)

    Es, Bram van, E-mail: bramiozo@gmail.com [Centrum Wiskunde & Informatica, P.O. Box 94079, 1090GB Amsterdam (Netherlands); FOM Institute DIFFER, Dutch Institute for Fundamental Energy Research, The Netherlands" 1 (Netherlands); Koren, Barry [Eindhoven University of Technology (Netherlands); Blank, Hugo J. de [FOM Institute DIFFER, Dutch Institute for Fundamental Energy Research, The Netherlands" 1 (Netherlands)

    2016-02-01

    In this paper, we apply a special finite-volume scheme, limited to smooth temperature distributions and Cartesian grids, to test the importance of connectivity of the finite volumes. The area of application is nuclear fusion plasma with field line aligned temperature gradients and extreme anisotropy. We apply the scheme to the anisotropic heat-conduction equation, and compare its results with those of existing finite-volume schemes for anisotropic diffusion. Also, we introduce a general model adaptation of the steady diffusion equation for extremely anisotropic diffusion problems with closed field lines.

  12. Finite-difference schemes for anisotropic diffusion

    Energy Technology Data Exchange (ETDEWEB)

    Es, Bram van, E-mail: es@cwi.nl [Centrum Wiskunde and Informatica, P.O. Box 94079, 1090GB Amsterdam (Netherlands); FOM Institute DIFFER, Dutch Institute for Fundamental Energy Research, Association EURATOM-FOM (Netherlands); Koren, Barry [Eindhoven University of Technology (Netherlands); Blank, Hugo J. de [FOM Institute DIFFER, Dutch Institute for Fundamental Energy Research, Association EURATOM-FOM (Netherlands)

    2014-09-01

    In fusion plasmas diffusion tensors are extremely anisotropic due to the high temperature and large magnetic field strength. This causes diffusion, heat conduction, and viscous momentum loss, to effectively be aligned with the magnetic field lines. This alignment leads to different values for the respective diffusive coefficients in the magnetic field direction and in the perpendicular direction, to the extent that heat diffusion coefficients can be up to 10{sup 12} times larger in the parallel direction than in the perpendicular direction. This anisotropy puts stringent requirements on the numerical methods used to approximate the MHD-equations since any misalignment of the grid may cause the perpendicular diffusion to be polluted by the numerical error in approximating the parallel diffusion. Currently the common approach is to apply magnetic field-aligned coordinates, an approach that automatically takes care of the directionality of the diffusive coefficients. This approach runs into problems at x-points and at points where there is magnetic re-connection, since this causes local non-alignment. It is therefore useful to consider numerical schemes that are tolerant to the misalignment of the grid with the magnetic field lines, both to improve existing methods and to help open the possibility of applying regular non-aligned grids. To investigate this, in this paper several discretization schemes are developed and applied to the anisotropic heat diffusion equation on a non-aligned grid.

  13. Galaxy alignments: An overview

    CERN Document Server

    Joachimi, Benjamin; Kitching, Thomas D; Leonard, Adrienne; Mandelbaum, Rachel; Schäfer, Björn Malte; Sifón, Cristóbal; Hoekstra, Henk; Kiessling, Alina; Kirk, Donnacha; Rassat, Anais

    2015-01-01

    The alignments between galaxies, their underlying matter structures, and the cosmic web constitute vital ingredients for a comprehensive understanding of gravity, the nature of matter, and structure formation in the Universe. We provide an overview on the state of the art in the study of these alignment processes and their observational signatures, aimed at a non-specialist audience. The development of the field over the past one hundred years is briefly reviewed. We also discuss the impact of galaxy alignments on measurements of weak gravitational lensing, and discuss avenues for making theoretical and observational progress over the coming decade.

  14. Discriminative Shape Alignment

    DEFF Research Database (Denmark)

    Loog, M.; de Bruijne, M.

    2009-01-01

    The alignment of shape data to a common mean before its subsequent processing is an ubiquitous step within the area shape analysis. Current approaches to shape analysis or, as more specifically considered in this work, shape classification perform the alignment in a fully unsupervised way......, not taking into account that eventually the shapes are to be assigned to two or more different classes. This work introduces a discriminative variation to well-known Procrustes alignment and demonstrates its benefit over this classical method in shape classification tasks. The focus is on two......-dimensional shapes from a two-class recognition problem....

  15. Coupled external cavity photonic crystal enhanced fluorescence.

    Science.gov (United States)

    Pokhriyal, Anusha; Lu, Meng; Ge, Chun; Cunningham, Brian T

    2014-05-01

    We report a fundamentally new approach to enhance fluorescence in which surface adsorbed fluorophore-tagged biomolecules are excited on a photonic crystal surface that functions as a narrow bandwidth and tunable mirror of an external cavity laser. This scheme leads to ∼10× increase in the electromagnetic enhancement factor compared to ordinary photonic crystal enhanced fluorescence. In our experiments, the cavity automatically tunes its lasing wavelength to the resonance wavelength of the photonic crystal, ensuring optimal on-resonance coupling even in the presence of variable device parameters and variations in the density of surface-adsorbed capture molecules. We achieve ∼10(5) × improvement in the limit of detection of a fluorophore-tagged protein compared to its detection on an unpatterned glass substrate. The enhanced fluorescence signal and easy optical alignment make cavity-coupled photonic crystals a viable approach for further reducing detection limits of optically-excited light emitters that are used in biological assays.

  16. General Compact Labeling Schemes for Dynamic Trees

    OpenAIRE

    2006-01-01

    Let $F$ be a function on pairs of vertices. An {\\em $F$- labeling scheme} is composed of a {\\em marker} algorithm for labeling the vertices of a graph with short labels, coupled with a {\\em decoder} algorithm allowing one to compute $F(u,v)$ of any two vertices $u$ and $v$ directly from their labels. As applications for labeling schemes concern mainly large and dynamically changing networks, it is of interest to study {\\em distributed dynamic} labeling schemes. This paper investigates labelin...

  17. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G.Gomez

    Since September, the muon alignment system shifted from a mode of hardware installation and commissioning to operation and data taking. All three optical subsystems (Barrel, Endcap and Link alignment) have recorded data before, during and after CRAFT, at different magnetic fields and during ramps of the magnet. This first data taking experience has several interesting goals: •    study detector deformations and movements under the influence of the huge magnetic forces; •    study the stability of detector structures and of the alignment system over long periods, •    study geometry reproducibility at equal fields (specially at 0T and 3.8T); •    reconstruct B=0T geometry and compare to nominal/survey geometries; •    reconstruct B=3.8T geometry and provide DT and CSC alignment records for CMSSW. However, the main goal is to recons...

  18. MSAViewer: interactive JavaScript visualization of multiple sequence alignments.

    Science.gov (United States)

    Yachdav, Guy; Wilzbach, Sebastian; Rauscher, Benedikt; Sheridan, Robert; Sillitoe, Ian; Procter, James; Lewis, Suzanna E; Rost, Burkhard; Goldberg, Tatyana

    2016-11-15

    The MSAViewer is a quick and easy visualization and analysis JavaScript component for Multiple Sequence Alignment data of any size. Core features include interactive navigation through the alignment, application of popular color schemes, sorting, selecting and filtering. The MSAViewer is 'web ready': written entirely in JavaScript, compatible with modern web browsers and does not require any specialized software. The MSAViewer is part of the BioJS collection of components.

  19. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G. Gomez

    2012-01-01

      A new muon alignment has been produced for 2012 A+B data reconstruction. It uses the latest Tracker alignment and single-muon data samples to align both DTs and CSCs. Physics validation has been performed and shows a modest improvement in stand-alone muon momentum resolution in the barrel, where the alignment is essentially unchanged from the previous version. The reference-target track-based algorithm using only collision muons is employed for the first time to align the CSCs, and a substantial improvement in resolution is observed in the endcap and overlap regions for stand-alone muons. This new alignment is undergoing the approval process and is expected to be deployed as part of a new global tag in the beginning of December. The pT dependence of the φ-bias in curvature observed in Monte Carlo was traced to a relative vertical misalignment between the Tracker and barrel muon systems. Moving the barrel as a whole to match the Tracker cures this pT dependence, leaving only the &phi...

  20. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    S. Szillasi

    2013-01-01

    The CMS detector has been gradually opened and whenever a wheel became exposed the first operation was the removal of the MABs, the sensor structures of the Hardware Barrel Alignment System. By the last days of June all 36 MABs have arrived at the Alignment Lab at the ISR where, as part of the Alignment Upgrade Project, they are refurbished with new Survey target holders. Their electronic checkout is on the way and finally they will be recalibrated. During LS1 the alignment system will be upgraded in order to allow more precise reconstruction of the MB4 chambers in Sector 10 and Sector 4. This requires new sensor components, so called MiniMABs (pictured below), that have already been assembled and calibrated. Image 6: Calibrated MiniMABs are ready for installation For the track-based alignment, the systematic uncertainties of the algorithm are under scrutiny: this study will enable the production of an improved Monte Carlo misalignment scenario and to update alignment position errors eventually, crucial...

  1. Incremental Alignment Manifold Learning

    Institute of Scientific and Technical Information of China (English)

    Zhi Han; De-Yu Meng; Zong-Sen Xu; Nan-Nan Gu

    2011-01-01

    A new manifold learning method, called incremental alignment method (IAM), is proposed for nonlinear dimensionality reduction of high dimensional data with intrinsic low dimensionality. The main idea is to incrementally align low-dimensional coordinates of input data patch-by-patch to iteratively generate the representation of the entire dataset. The method consists of two major steps, the incremental step and the alignment step. The incremental step incrementally searches neighborhood patch to be aligned in the next step, and the alignment step iteratively aligns the low-dimensional coordinates of the neighborhood patch searched to generate the embeddings of the entire dataset. Compared with the existing manifold learning methods, the proposed method dominates in several aspects: high efficiency, easy out-of-sample extension, well metric-preserving, and averting of the local minima issue. All these properties are supported by a series of experiments performed on the synthetic and real-life datasets. In addition, the computational complexity of the proposed method is analyzed, and its efficiency is theoretically argued and experimentally demonstrated.

  2. Curriculum Alignment Research Suggests that Alignment Can Improve Student Achievement

    Science.gov (United States)

    Squires, David

    2012-01-01

    Curriculum alignment research has developed showing the relationship among three alignment categories: the taught curriculum, the tested curriculum and the written curriculum. Each pair (for example, the taught and the written curriculum) shows a positive impact for aligning those results. Following this, alignment results from the Third…

  3. Study of Physical Scheme for 10 MW Accelerator-driven Fast-thermal Coupled Gas-cooled Reactor%加速器驱动10 MW快热耦合气冷堆物理方案研究

    Institute of Scientific and Technical Information of China (English)

    李金阳; 顾龙; 秦长平; 王大伟; 刘璐

    2013-01-01

    The accelerator-driven sub-critical system has promising future in transmuta-tion of nuclear spent fuels .A physical design of a 10MW fast-thermal spectrum gas-cooled reactor was studied .The program COUPLE2.0 ,which couples with MCNPX and ORIGEN ,was applied to compute this scheme ,and the continuous energy neutron cross section was obtained by the nuclear data library of ENDF-7 which was modified with five different temperatures :300 ,600 ,900 ,1 500 ,and 2500K .The physical pa-rameters such as kef ,proton efficiency ,delayed neutron fraction and accelerator current varying with the burnup time were obtained .The system during 350 d burnup was obtained and the transmutation capability was analyzed by the further calculation .It is found that during the 350 d burnup ,the variations of kef and accelerator current are relatively small .The system has good transmutation capability with the transmutation support ratio of 24.86 .%加速器驱动的次临界系统(ADS )在实现嬗变核废料方面具有良好的前景。对加速器驱动10 M W次临界快热耦合能谱气冷堆的物理方案进行了设计和研究,利用 MCNPX和ORIGEN耦合的计算程序COUPLE2.0对该方案进行了计算,其中,中子截面采用ENDF-7处理后得到的5个温度300、600、900、1500、2500 K下的连续能量核数据库。得到该方案350 d燃耗期间的 kef 、质子效率、缓发中子份额以及加速器束流强度的变化。进而计算得到了该方案的燃耗信息,并分析了该方案的嬗变能力。结果表明,该方案在350 d燃耗期间的 kef 、加速器束流强度变化较小,嬗变支持比为24.86,具有较好的嬗变效果。

  4. MaxAlign: maximizing usable data in an alignment

    DEFF Research Database (Denmark)

    Oliveira, Rodrigo Gouveia; Sackett, Peter Wad; Pedersen, Anders Gorm

    2007-01-01

    BACKGROUND: The presence of gaps in an alignment of nucleotide or protein sequences is often an inconvenience for bioinformatical studies. In phylogenetic and other analyses, for instance, gapped columns are often discarded entirely from the alignment. RESULTS: MaxAlign is a program that optimizes...... the alignment prior to such analyses. Specifically, it maximizes the number of nucleotide (or amino acid) symbols that are present in gap-free columns - the alignment area - by selecting the optimal subset of sequences to exclude from the alignment. MaxAlign can be used prior to phylogenetic and bioinformatical...... analyses as well as in other situations where this form of alignment improvement is useful. In this work we test MaxAlign's performance in these tasks and compare the accuracy of phylogenetic estimates including and excluding gapped columns from the analysis, with and without processing with MaxAlign...

  5. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    M. Dallavalle

    2013-01-01

    A new Muon misalignment scenario for 2011 (7 TeV) Monte Carlo re-processing was re-leased. The scenario is based on running of standard track-based reference-target algorithm (exactly as in data) using single-muon simulated sample (with the transverse-momentum spectrum matching data). It used statistics similar to what was used for alignment with 2011 data, starting from an initially misaligned Muon geometry from uncertainties of hardware measurements and using the latest Tracker misalignment geometry. Validation of the scenario (with muons from Z decay and high-pT simulated muons) shows that it describes data well. The study of systematic uncertainties (dominant by now due to huge amount of data collected by CMS and used for muon alignment) is finalised. Realistic alignment position errors are being obtained from the estimated uncertainties and are expected to improve the muon reconstruction performance. Concerning the Hardware Alignment System, the upgrade of the Barrel Alignment is in progress. By now, d...

  6. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G. Gomez

    2010-01-01

    For the last three months, the Muon Alignment group has focussed on providing a new, improved set of alignment constants for the end-of-year data reprocessing. These constants were delivered on time and approved by the CMS physics validation team on November 17. The new alignment incorporates several improvements over the previous one from March for nearly all sub-systems. Motivated by the loss of information from a hardware failure in May (an entire MAB was lost), the optical barrel alignment has moved from a modular, super-plane reconstruction, to a full, single loop calculation of the entire geometry for all DTs in stations 1, 2 and 3. This makes better use of the system redundancy, mitigating the effect of the information loss. Station 4 is factorised and added afterwards to make the system smaller (and therefore faster to run), and also because the MAB calibration at the MB4 zone is less precise. This new alignment procedure was tested at 0 T against photogrammetry resulting in precisions of the order...

  7. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    Gervasio Gomez

    2012-01-01

      The new alignment for the DT chambers has been successfully used in physics analysis starting with the 52X Global Tag. The remaining main areas of development over the next few months will be preparing a new track-based CSC alignment and producing realistic APEs (alignment position errors) and MC misalignment scenarios to match the latest muon alignment constants. Work on these items has been delayed from the intended timeline, mostly due to a large involvement of the muon alignment man-power in physics analyses over the first half of this year. As CMS keeps probing higher and higher energies, special attention must be paid to the reconstruction of very-high-energy muons. Recent muon POG reports from mid-June show a φ-dependence in curvature bias in Monte Carlo samples. This bias is observed already at the tracker level, where it is constant with muon pT, while it grows with pT as muon chamber information is added to the tracks. Similar studies show a much smaller effect in data, at le...

  8. Yukawa alignment from natural flavor conservation

    CERN Document Server

    Cree, Graham

    2011-01-01

    We study the charged Higgs couplings to fermions in the "democratic" three-Higgs-doublet model, in which one doublet couples to down-type quarks, one to up-type quarks, and one to charged leptons. Flavor-changing neutral Higgs couplings are absent because the Glashow-Weinberg-Paschos condition for natural flavor conservation is in effect. We show that this model reproduces the coupling structure of the charged Higgs boson in the recently-proposed Yukawa-aligned two-Higgs-doublet model, with two subtle constraints that arise from the unitarity of the charged Higgs mixing matrix. Adding a fourth Higgs doublet with no couplings to fermions eliminates these constraints.

  9. Strategic Alignment of Business Intelligence

    OpenAIRE

    Cederberg, Niclas

    2010-01-01

    This thesis is about the concept of strategic alignment of business intelligence. It is based on a theoretical foundation that is used to define and explain business intelligence, data warehousing and strategic alignment. By combining a number of different methods for strategic alignment a framework for alignment of business intelligence is suggested. This framework addresses all different aspects of business intelligence identified as relevant for strategic alignment of business intelligence...

  10. Orientation and Alignment Echoes

    CERN Document Server

    Karras, G; Billard, F; Lavorel, B; Hartmann, J -M; Faucher, O; Gershnabel, E; Prior, Y; Averbukh, I Sh

    2015-01-01

    We present what is probably the simplest classical system featuring the echo phenomenon - a collection of randomly oriented free rotors with dispersed rotational velocities. Following excitation by a pair of time-delayed impulsive kicks, the mean orientation/alignment of the ensemble exhibits multiple echoes and fractional echoes. We elucidate the mechanism of the echo formation by kick-induced filamentation of phase space, and provide the first experimental demonstration of classical alignment echoes in a thermal gas of CO_2 molecules excited by a pair of femtosecond laser pulses.

  11. PILOT optical alignment

    Science.gov (United States)

    Longval, Y.; Mot, B.; Ade, P.; André, Y.; Aumont, J.; Baustista, L.; Bernard, J.-Ph.; Bray, N.; de Bernardis, P.; Boulade, O.; Bousquet, F.; Bouzit, M.; Buttice, V.; Caillat, A.; Charra, M.; Chaigneau, M.; Crane, B.; Crussaire, J.-P.; Douchin, F.; Doumayrou, E.; Dubois, J.-P.; Engel, C.; Etcheto, P.; Gélot, P.; Griffin, M.; Foenard, G.; Grabarnik, S.; Hargrave, P..; Hughes, A.; Laureijs, R.; Lepennec, Y.; Leriche, B.; Maestre, S.; Maffei, B.; Martignac, J.; Marty, C.; Marty, W.; Masi, S.; Mirc, F.; Misawa, R.; Montel, J.; Montier, L.; Narbonne, J.; Nicot, J.-M.; Pajot, F.; Parot, G.; Pérot, E.; Pimentao, J.; Pisano, G.; Ponthieu, N.; Ristorcelli, I.; Rodriguez, L.; Roudil, G.; Salatino, M.; Savini, G.; Simonella, O.; Saccoccio, M.; Tapie, P.; Tauber, J.; Torre, J.-P.; Tucker, C.

    2016-07-01

    PILOT is a balloon-borne astronomy experiment designed to study the polarization of dust emission in the diffuse interstellar medium in our Galaxy at wavelengths 240 μm with an angular resolution about two arcminutes. Pilot optics is composed an off-axis Gregorian type telescope and a refractive re-imager system. All optical elements, except the primary mirror, are in a cryostat cooled to 3K. We combined the optical, 3D dimensional measurement methods and thermo-elastic modeling to perform the optical alignment. The talk describes the system analysis, the alignment procedure, and finally the performances obtained during the first flight in September 2015.

  12. Reducing beam shaper alignment complexity: diagnostic techniques for alignment and tuning

    Science.gov (United States)

    Lizotte, Todd E.

    2011-10-01

    Safe and efficient optical alignment is a critical requirement for industrial laser systems used in a high volume manufacturing environment. Of specific interest is the development of techniques to align beam shaping optics within a beam line; having the ability to instantly verify by a qualitative means that each element is in its proper position as the beam shaper module is being aligned. There is a need to reduce these types of alignment techniques down to a level where even a newbie to optical alignment will be able to complete the task. Couple this alignment need with the fact that most laser system manufacturers ship their products worldwide and the introduction of a new set of variables including cultural and language barriers, makes this a top priority for manufacturers. Tools and methodologies for alignment of complex optical systems need to be able to cross these barriers to ensure the highest degree of up time and reduce the cost of maintenance on the production floor. Customers worldwide, who purchase production laser equipment, understand that the majority of costs to a manufacturing facility is spent on system maintenance and is typically the largest single controllable expenditure in a production plant. This desire to reduce costs is driving the trend these days towards predictive and proactive, not reactive maintenance of laser based optical beam delivery systems [10]. With proper diagnostic tools, laser system developers can develop proactive approaches to reduce system down time, safe guard operational performance and reduce premature or catastrophic optics failures. Obviously analytical data will provide quantifiable performance standards which are more precise than qualitative standards, but each have a role in determining overall optical system performance [10]. This paper will discuss the use of film and fluorescent mirror devices as diagnostic tools for beam shaper module alignment off line or in-situ. The paper will also provide an overview

  13. Large Telescope Segmented Primary Mirror Alignment

    Science.gov (United States)

    Rud, Mayer

    2010-01-01

    A document discusses a broadband (white light) point source, located at the telescope Cassegrain focus, which generates a cone of light limited by the hole in the secondary mirror (SM). It propagates to the aspheric null-mirror, which is optimized to make all the reflected rays to be normal to the primary mirror (PM) upon reflection. PM retro-reflects the rays back through the system for wavefront analysis. The point source and the wavefront analysis subsystems are all located behind the PM. The PM phasing is absolute (white light) and does not involve the SM. A relatively small, aspheric null-mirror located near the PM center of curvature has been designed to deliver the high level of optical wavefront correction. The phasing of the segments is absolute due to the use of a broadband source. The segmented PM is optically aligned independently and separately from the SM alignment. The separation of the PM segments alignment from the PM to the SM, and other telescope optics alignments, may be a significant advantage, eliminating the errors coupling. The point source of this concept is fully cooperative, unlike a star or laser-generated guide-star, providing the necessary brightness for the optimal S/N ratio, the spectral content, and the stable on-axis position. This concept can be implemented in the lab for the PM initial alignment, or made to be a permanent feature of the space-based or groundbased telescope.

  14. Evaluation of Cloud Microphysics Simulated using a Meso-Scale Model Coupled with a Spectral Bin Microphysical Scheme through Comparison with Observation Data by Ship-Borne Doppler and Space-Borne W-Band Radars

    Science.gov (United States)

    Iguchi, T.; Nakajima, T.; Khain, A. P.; Saito, K.; Takemura, T.; Okamoto, H.; Nishizawa, T.; Tao, W.-K.

    2012-01-01

    Equivalent radar reflectivity factors (Ze) measured by W-band radars are directly compared with the corresponding values calculated from a three-dimensional non-hydrostatic meso-scale model coupled with a spectral-bin-microphysical (SBM) scheme for cloud. Three case studies are the objects of this research: one targets a part of ship-borne observation using 95 GHz Doppler radar over the Pacific Ocean near Japan in May 2001; other two are aimed at two short segments of space-borne observation by the cloud profiling radar on CloudSat in November 2006. The numerical weather prediction (NWP) simulations reproduce general features of vertical structures of Ze and Doppler velocity. A main problem in the reproducibility is an overestimation of Ze in ice cloud layers. A frequency analysis shows a strong correlation between ice water contents (IWC) and Ze in the simulation; this characteristic is similar to those shown in prior on-site studies. From comparing with the empirical correlations by the prior studies, the simulated Ze is overestimated than the corresponding values in the studies at the same IWC. Whereas the comparison of Doppler velocities suggests that large-size snowflakes are necessary for producing large velocities under the freezing level and hence rules out the possibility that an overestimation of snow size causes the overestimation of Ze. Based on the results of several sensitivity tests, we conclude that the source of the overestimation is a bias in the microphysical calculation of Ze or an overestimation of IWC. To identify the source of the problems needs further validation research with other follow-up observations.

  15. Aligning Theory with Practice

    Science.gov (United States)

    Kurz, Terri L.; Batarelo, Ivana

    2009-01-01

    This article describes a structure to help preservice teachers get invaluable field experience by aligning theory with practice supported by the integration of elementary school children into their university mathematics methodology course. This course structure allowed preservice teachers to learn about teaching mathematics in a nonthreatening…

  16. MUON DETECTORS: ALIGNMENT

    CERN Multimedia

    G. Gomez and Y. Pakhotin

    2012-01-01

      A new track-based alignment for the DT chambers is ready for deployment: an offline tag has already been produced which will become part of the 52X Global Tag. This alignment was validated within the muon alignment group both at low and high momentum using a W/Z skim sample. It shows an improved mass resolution for pairs of stand-alone muons, improved curvature resolution at high momentum, and improved DT segment extrapolation residuals. The validation workflow for high-momentum muons used to depend solely on the “split cosmics” method, looking at the curvature difference between muon tracks reconstructed in the upper or lower half of CMS. The validation has now been extended to include energetic muons decaying from heavily boosted Zs: the di-muon invariant mass for global and stand-alone muons is reconstructed, and the invariant mass resolution is compared for different alignments. The main areas of development over the next few months will be preparing a new track-based C...

  17. Alignment of concerns

    DEFF Research Database (Denmark)

    Andersen, Tariq Osman; Bansler, Jørgen P.; Kensing, Finn;

    2014-01-01

    The emergence of patient-centered eHealth systems introduces new challenges, where patients come to play an increasingly important role. Realizing the promises requires an in-depth understanding of not only the technology, but also the needs of both clinicians and patients. However, insights from...... as a design rationale for successful eHealth, termed 'alignment of concerns'....

  18. Aligning Mental Representations

    DEFF Research Database (Denmark)

    Kano Glückstad, Fumiko

    2013-01-01

    This work introduces a framework that implements asymmetric communication theory proposed by Sperber and Wilson [1]. The framework applies a generalization model known as the Bayesian model of generalization (BMG) [2] for aligning knowledge possessed by two communicating parties. The work focuses...

  19. On the Beamforming Design for Efficient Interference Alignment

    CERN Document Server

    Choi, Sang Won; Chung, Sae-Young

    2009-01-01

    An efficient interference alignment (IA) scheme is developed for $K$-user single-input single-output frequency selective fading interference channels. The main idea is to steer the transmit beamforming matrices such that at each receiver the subspace dimensions occupied by interference-free desired streams are asymptotically the same as those occupied by all interferences. Our proposed scheme achieves a higher multiplexing gain at any given number of channel realizations in comparison with the original IA scheme, which is known to achieve the optimal multiplexing gain asymptotically.

  20. Interference Alignment in Dense Wireless Networks

    CERN Document Server

    Niesen, Urs

    2009-01-01

    We consider arbitrary dense wireless networks, in which $n$ nodes are placed in an arbitrary (deterministic) manner on a square region of unit area and communicate with each other over Gaussian fading channels. We provide inner and outer bounds for the $n\\times n$-dimensional unicast and the $n\\times 2^n$-dimensional multicast capacity regions of such a wireless network. These inner and outer bounds differ only by a factor $O(\\log(n))$, yielding a fairly tight scaling characterization of the entire regions. The communication schemes achieving the inner bounds use interference alignment as a central technique and are surprisingly simple.

  1. ABS: Sequence alignment by scanning

    KAUST Repository

    Bonny, Mohamed Talal

    2011-08-01

    Sequence alignment is an essential tool in almost any computational biology research. It processes large database sequences and considered to be high consumers of computation time. Heuristic algorithms are used to get approximate but fast results. We introduce fast alignment algorithm, called Alignment By Scanning (ABS), to provide an approximate alignment of two DNA sequences. We compare our algorithm with the well-known alignment algorithms, the FASTA (which is heuristic) and the \\'Needleman-Wunsch\\' (which is optimal). The proposed algorithm achieves up to 76% enhancement in alignment score when it is compared with the FASTA Algorithm. The evaluations are conducted using different lengths of DNA sequences. © 2011 IEEE.

  2. Fast global sequence alignment technique

    KAUST Repository

    Bonny, Mohamed Talal

    2011-11-01

    Bioinformatics database is growing exponentially in size. Processing these large amount of data may take hours of time even if super computers are used. One of the most important processing tool in Bioinformatics is sequence alignment. We introduce fast alignment algorithm, called \\'Alignment By Scanning\\' (ABS), to provide an approximate alignment of two DNA sequences. We compare our algorithm with the wellknown sequence alignment algorithms, the \\'GAP\\' (which is heuristic) and the \\'Needleman-Wunsch\\' (which is optimal). The proposed algorithm achieves up to 51% enhancement in alignment score when it is compared with the GAP Algorithm. The evaluations are conducted using different lengths of DNA sequences. © 2011 IEEE.

  3. MUSE alignment onto VLT

    Science.gov (United States)

    Laurent, Florence; Renault, Edgard; Boudon, Didier; Caillier, Patrick; Daguisé, Eric; Dupuy, Christophe; Jarno, Aurélien; Lizon, Jean-Louis; Migniau, Jean-Emmanuel; Nicklas, Harald; Piqueras, Laure

    2014-07-01

    MUSE (Multi Unit Spectroscopic Explorer) is a second generation Very Large Telescope (VLT) integral field spectrograph developed for the European Southern Observatory (ESO). It combines a 1' x 1' field of view sampled at 0.2 arcsec for its Wide Field Mode (WFM) and a 7.5"x7.5" field of view for its Narrow Field Mode (NFM). Both modes will operate with the improved spatial resolution provided by GALACSI (Ground Atmospheric Layer Adaptive Optics for Spectroscopic Imaging), that will use the VLT deformable secondary mirror and 4 Laser Guide Stars (LGS) foreseen in 2015. MUSE operates in the visible wavelength range (0.465-0.93 μm). A consortium of seven institutes is currently commissioning MUSE in the Very Large Telescope for the Preliminary Acceptance in Chile, scheduled for September, 2014. MUSE is composed of several subsystems which are under the responsibility of each institute. The Fore Optics derotates and anamorphoses the image at the focal plane. A Splitting and Relay Optics feed the 24 identical Integral Field Units (IFU), that are mounted within a large monolithic structure. Each IFU incorporates an image slicer, a fully refractive spectrograph with VPH-grating and a detector system connected to a global vacuum and cryogenic system. During 2012 and 2013, all MUSE subsystems were integrated, aligned and tested to the P.I. institute at Lyon. After successful PAE in September 2013, MUSE instrument was shipped to the Very Large Telescope in Chile where that was aligned and tested in ESO integration hall at Paranal. After, MUSE was directly transported, fully aligned and without any optomechanical dismounting, onto VLT telescope where the first light was overcame the 7th of February, 2014. This paper describes the alignment procedure of the whole MUSE instrument with respect to the Very Large Telescope (VLT). It describes how 6 tons could be move with accuracy better than 0.025mm and less than 0.25 arcmin in order to reach alignment requirements. The success

  4. CWDM based HDMI interconnect incorporating passively aligned POF linked optical subassembly modules

    Science.gov (United States)

    Lee, Hak-Soon; Lee, Sang-Shin; Son, Yung-Sung

    2011-08-01

    A four-channel transmitter OSA (TOSA) and a receiver optical sub-assembly (ROSA) module were presented. They take advantage of a coarse WDM (CWDM) scheme, employing two types of VCSELs at 780 and 850 nm, where no wavelength filters are involved in the TOSA. The ROSA and TOSA were constructed through a fully passive alignment process using components produced by virtue of a cost effective plastic injection molding technique. In order to build a high quality optical HDMI interconnect, four channel optical links between these modules ware established via two graded-index plastic optical fibers (GI-POFs). The HDMI interconnect was thoroughly evaluated in terms of the alignment tolerance, the light beam propagation, and the data transmission capability. For the ROSA, the measured tolerance, as affected by the photodiode alignment, was ~45 μm and over 200 μm for the transverse and longitudinal directions, respectively. For the TOSA, the tolerance, which is mostly dependent upon the VCSEL alignment, was ~20 μm and more than 200 μm for the transverse and longitudinal directions, respectively. The beam profiles for the TOSA and ROSA were monitored to confirm their feasibility from the optical coupling perspective. A digital signal at 2.5 Gb/s was efficiently transmitted through the HDMI interconnect with a bit error ratio of below 10-16. A 1080p HDMI signal from a Blu-ray player was delivered through the interconnect to an LCD monitor and successfully displayed a high quality video.

  5. Formatt: Correcting protein multiple structural alignments by incorporating sequence alignment

    Directory of Open Access Journals (Sweden)

    Daniels Noah M

    2012-10-01

    Full Text Available Abstract Background The quality of multiple protein structure alignments are usually computed and assessed based on geometric functions of the coordinates of the backbone atoms from the protein chains. These purely geometric methods do not utilize directly protein sequence similarity, and in fact, determining the proper way to incorporate sequence similarity measures into the construction and assessment of protein multiple structure alignments has proved surprisingly difficult. Results We present Formatt, a multiple structure alignment based on the Matt purely geometric multiple structure alignment program, that also takes into account sequence similarity when constructing alignments. We show that Formatt outperforms Matt and other popular structure alignment programs on the popular HOMSTRAD benchmark. For the SABMark twilight zone benchmark set that captures more remote homology, Formatt and Matt outperform other programs; depending on choice of embedded sequence aligner, Formatt produces either better sequence and structural alignments with a smaller core size than Matt, or similarly sized alignments with better sequence similarity, for a small cost in average RMSD. Conclusions Considering sequence information as well as purely geometric information seems to improve quality of multiple structure alignments, though defining what constitutes the best alignment when sequence and structural measures would suggest different alignments remains a difficult open question.

  6. Multifunctional bowtie-shaped ridge aperture for overlay alignment in plasmonic direct writing lithography using a contact probe.

    Science.gov (United States)

    Oh, Seonghyeon; Lee, Taekyong; Hahn, Jae W

    2013-07-01

    We propose a scheme of overlay alignment for plasmonic lithography using a scanning contact probe. Using two resonances of a ridge aperture in a metal film, we introduce the aperture's multifunctional characteristics for patterning and alignment at different wavelengths. To verify this idea, we measure an image of an alignment mark using a scanning ridge aperture and determine the reference point for the alignment. We then analyze the uncertainty of the alignment method with respect to the image data noise and compare the numerical results with the experimental results. The uncertainty of the overlay alignment method is shown to be less than approximately 2 nm.

  7. Switching of polymer-stabilized vertical alignment liquid crystal cell.

    Science.gov (United States)

    Huang, Chi-Yen; Jhuang, Wen-Yi; Hsieh, Chia-Ting

    2008-03-17

    This work investigates the switching characteristics of the polymer-stabilized vertical alignment (VA) liquid crystal (LC) cell. The experimental results reveal that the fall time of the cell declines as the monomer concentration increases because the vertically-aligned polymer networks accelerate the relaxation of the LC molecules. Furthermore, the formed polymer networks impede the growth and annihilation of LC defects, suppressing the optical bounce in the time dependent transmittance curve of the cell when the voltage is applied to the cell, substantially reducing the rise time of the cell. A step-voltage driving scheme is demonstrated to eliminate completely the optical bounce and hence improve further the rise time of the VA LC cell. The rise times of the pristine and the polymer-stabilized VA LC cells under the step-voltage driving scheme are less than 50% of those under the conventional driving scheme.

  8. Aligning component upgrades

    Directory of Open Access Journals (Sweden)

    Roberto Di Cosmo

    2011-08-01

    Full Text Available Modern software systems, like GNU/Linux distributions or Eclipse-based development environment, are often deployed by selecting components out of large component repositories. Maintaining such software systems by performing component upgrades is a complex task, and the users need to have an expressive preferences language at their disposal to specify the kind of upgrades they are interested in. Recent research has shown that it is possible to develop solvers that handle preferences expressed as a combination of a few basic criteria used in the MISC competition, ranging from the number of new components to the freshness of the final configuration. In this work we introduce a set of new criteria that allow the users to specify their preferences for solutions with components aligned to the same upstream sources, provide an efficient encoding and report on the experimental results that prove that optimising these alignment criteria is a tractable problem in practice.

  9. Inflation by alignment

    Energy Technology Data Exchange (ETDEWEB)

    Burgess, C.P. [PH -TH Division, CERN,CH-1211, Genève 23 (Switzerland); Department of Physics & Astronomy, McMaster University,1280 Main Street West, Hamilton ON (Canada); Perimeter Institute for Theoretical Physics,31 Caroline Street North, Waterloo ON (Canada); Roest, Diederik [Van Swinderen Institute for Particle Physics and Gravity, University of Groningen,Nijenborgh 4, 9747 AG Groningen (Netherlands)

    2015-06-08

    Pseudo-Goldstone bosons (pGBs) can provide technically natural inflatons, as has been comparatively well-explored in the simplest axion examples. Although inflationary success requires trans-Planckian decay constants, f≳M{sub p}, several mechanisms have been proposed to obtain this, relying on (mis-)alignments between potential and kinetic energies in multiple-field models. We extend these mechanisms to a broader class of inflationary models, including in particular the exponential potentials that arise for pGB potentials based on noncompact groups (and so which might apply to moduli in an extra-dimensional setting). The resulting potentials provide natural large-field inflationary models and can predict a larger primordial tensor signal than is true for simpler single-field versions of these models. In so doing we provide a unified treatment of several alignment mechanisms, showing how each emerges as a limit of the more general setup.

  10. Comparison of Three Schemes for Intermediate Data Rate Frame Synchronization

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    Based on the frame structure of intermediate data rate (IDR) modem for satellite communication, a new method for searching frame synchronization called group frame synchronization is proposed. At the same time, a candidate scheme in the classical frame synchronization and two candidate schemes in the group frame synchronization are presented, and the circuits for each scheme are designed in order to abstract the frame alignment signals from received data. Their implementation complexity and performances are also computed and given. Based on the analysis and performance comparison, a reasonable scheme is chosen and then verified through software simulation and hardware impletentation.

  11. Alignment of concerns

    DEFF Research Database (Denmark)

    Andersen, Tariq Osman; Bansler, Jørgen P.; Kensing, Finn;

    E-health promises to enable and support active patient participation in chronic care. However, these fairly recent innovations are complicated matters and emphasize significant challenges, such as patients’ and clinicians’ different ways of conceptualizing disease and illness. Informed by insight...... from medical phenomenology and our own empirical work in telemonitoring and medical care of heart patients, we propose a design rationale for e-health systems conceptualized as the ‘alignment of concerns’....

  12. Nuclear reactor alignment plate configuration

    Energy Technology Data Exchange (ETDEWEB)

    Altman, David A; Forsyth, David R; Smith, Richard E; Singleton, Norman R

    2014-01-28

    An alignment plate that is attached to a core barrel of a pressurized water reactor and fits within slots within a top plate of a lower core shroud and upper core plate to maintain lateral alignment of the reactor internals. The alignment plate is connected to the core barrel through two vertically-spaced dowel pins that extend from the outside surface of the core barrel through a reinforcement pad and into corresponding holes in the alignment plate. Additionally, threaded fasteners are inserted around the perimeter of the reinforcement pad and into the alignment plate to further secure the alignment plate to the core barrel. A fillet weld also is deposited around the perimeter of the reinforcement pad. To accomodate thermal growth between the alignment plate and the core barrel, a gap is left above, below and at both sides of one of the dowel pins in the alignment plate holes through with the dowel pins pass.

  13. Orbit IMU alignment: Error analysis

    Science.gov (United States)

    Corson, R. W.

    1980-01-01

    A comprehensive accuracy analysis of orbit inertial measurement unit (IMU) alignments using the shuttle star trackers was completed and the results are presented. Monte Carlo techniques were used in a computer simulation of the IMU alignment hardware and software systems to: (1) determine the expected Space Transportation System 1 Flight (STS-1) manual mode IMU alignment accuracy; (2) investigate the accuracy of alignments in later shuttle flights when the automatic mode of star acquisition may be used; and (3) verify that an analytical model previously used for estimating the alignment error is a valid model. The analysis results do not differ significantly from expectations. The standard deviation in the IMU alignment error for STS-1 alignments was determined to the 68 arc seconds per axis. This corresponds to a 99.7% probability that the magnitude of the total alignment error is less than 258 arc seconds.

  14. Seeking the perfect alignment

    CERN Multimedia

    2002-01-01

    The first full-scale tests of the ATLAS Muon Spectrometer are about to begin in Prévessin. The set-up includes several layers of Monitored Drift Tubes Chambers (MDTs) and will allow tests of the performance of the detectors and of their highly accurate alignment system.   Monitored Drift Chambers in Building 887 in Prévessin, where they are just about to be tested. Muon chambers are keeping the ATLAS Muon Spectrometer team quite busy this summer. Now that most people go on holiday, the beam and alignment tests for these chambers are just starting. These chambers will measure with high accuracy the momentum of high-energy muons, and this implies very demanding requirements for their alignment. The MDT chambers consist of drift tubes, which are gas-filled metal tubes, 3 cm in diameter, with wires running down their axes. With high voltage between the wire and the tube wall, the ionisation due to traversing muons is detected as electrical pulses. With careful timing of the pulses, the position of the muon t...

  15. RECAT - Redundant Channel Alignment Technique

    Science.gov (United States)

    2016-06-07

    distribution unlimited 13. SUPPLEMENTARY NOTES NUWC2015 14. ABSTRACT A problem in the analog-to- digital , (A/D), conversion of broadband tape recorded...Alignment Technique, is used to align data taken on one pass with data from any other pass. The accuracy of this alignment is a function of the digital ...Redundant Channel Alignment Technique; analog-to- digital ; A/D; Broadband Bearing Time Processing 16. SECURITY CLASSIFICATION OF: 17. LIMITATION OF

  16. Method for alignment of microwires

    Energy Technology Data Exchange (ETDEWEB)

    Beardslee, Joseph A.; Lewis, Nathan S.; Sadtler, Bryce

    2017-01-24

    A method of aligning microwires includes modifying the microwires so they are more responsive to a magnetic field. The method also includes using a magnetic field so as to magnetically align the microwires. The method can further include capturing the microwires in a solid support structure that retains the longitudinal alignment of the microwires when the magnetic field is not applied to the microwires.

  17. Synchronization of general complex networks via adaptive control schemes

    Indian Academy of Sciences (India)

    Ping He; Chun-Guo Jing; Chang-Zhong Chen; Tao Fan; Hassan Saberi Nik

    2014-03-01

    In this paper, the synchronization problem of general complex networks is investigated by using adaptive control schemes. Time-delay coupling, derivative coupling, nonlinear coupling etc. exist universally in real-world complex networks. The adaptive synchronization scheme is designed for the complex network with multiple class of coupling terms. A criterion guaranteeing synchronization of such complex networks is established by employing the Lyapunov stability theorem and adaptive control schemes. Finally, an illustrative example with numerical simulation is given to show the feasibility and efficiency of theoretical results.

  18. Renormalization Scheme Dependence and Renormalization Group Summation

    CERN Document Server

    McKeon, D G C

    2016-01-01

    We consider logarithmic contributions to the free energy, instanton effective action and Laplace sum rules in QCD that are a consequence of radiative corrections. Upon summing these contributions by using the renormalization group, all dependence on the renormalization scale parameter mu cancels. The renormalization scheme dependence in these processes is examined, and a renormalization scheme is found in which the effect of higher order radiative corrections is absorbed by the behaviour of the running coupling.

  19. Evidence for a spin-aligned neutron-proton paired phase from the level structure of (92)Pd.

    Science.gov (United States)

    Cederwall, B; Moradi, F Ghazi; Bäck, T; Johnson, A; Blomqvist, J; Clément, E; de France, G; Wadsworth, R; Andgren, K; Lagergren, K; Dijon, A; Jaworski, G; Liotta, R; Qi, C; Nyakó, B M; Nyberg, J; Palacz, M; Al-Azri, H; Algora, A; de Angelis, G; Ataç, A; Bhattacharyya, S; Brock, T; Brown, J R; Davies, P; Di Nitto, A; Dombrádi, Zs; Gadea, A; Gál, J; Hadinia, B; Johnston-Theasby, F; Joshi, P; Juhász, K; Julin, R; Jungclaus, A; Kalinka, G; Kara, S O; Khaplanov, A; Kownacki, J; La Rana, G; Lenzi, S M; Molnár, J; Moro, R; Napoli, D R; Singh, B S Nara; Persson, A; Recchia, F; Sandzelius, M; Scheurer, J-N; Sletten, G; Sohler, D; Söderström, P-A; Taylor, M J; Timár, J; Valiente-Dobón, J J; Vardaci, E; Williams, S

    2011-01-06

    Shell structure and magic numbers in atomic nuclei were generally explained by pioneering work that introduced a strong spin-orbit interaction to the nuclear shell model potential. However, knowledge of nuclear forces and the mechanisms governing the structure of nuclei, in particular far from stability, is still incomplete. In nuclei with equal neutron and proton numbers (N = Z), enhanced correlations arise between neutrons and protons (two distinct types of fermions) that occupy orbitals with the same quantum numbers. Such correlations have been predicted to favour an unusual type of nuclear superfluidity, termed isoscalar neutron-proton pairing, in addition to normal isovector pairing. Despite many experimental efforts, these predictions have not been confirmed. Here we report the experimental observation of excited states in the N = Z = 46 nucleus (92)Pd. Gamma rays emitted following the (58)Ni((36)Ar,2n)(92)Pd fusion-evaporation reaction were identified using a combination of state-of-the-art high-resolution γ-ray, charged-particle and neutron detector systems. Our results reveal evidence for a spin-aligned, isoscalar neutron-proton coupling scheme, different from the previous prediction. We suggest that this coupling scheme replaces normal superfluidity (characterized by seniority coupling) in the ground and low-lying excited states of the heaviest N = Z nuclei. Such strong, isoscalar neutron-proton correlations would have a considerable impact on the nuclear level structure and possibly influence the dynamics of rapid proton capture in stellar nucleosynthesis.

  20. Generalized Group Signature Scheme

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The concept of generalized group signature scheme will bepresent. Based on the generalized secret sharing scheme proposed by Lin and Ha rn, a non-interactive approach is designed for realizing such generalized group signature scheme. Using the new scheme, the authorized subsets of the group in w hich the group member can cooperate to produce the valid signature for any messa ge can be randomly specified

  1. Semiautomated improvement of RNA alignments

    DEFF Research Database (Denmark)

    Andersen, Ebbe Sloth; Lind-Thomsen, Allan; Knudsen, Bjarne

    2007-01-01

    We have developed a semiautomated RNA sequence editor (SARSE) that integrates tools for analyzing RNA alignments. The editor highlights different properties of the alignment by color, and its integrated analysis tools prevent the introduction of errors when doing alignment editing. SARSE readily...... connects to external tools to provide a flexible semiautomatic editing environment. A new method, Pcluster, is introduced for dividing the sequences of an RNA alignment into subgroups with secondary structure differences. Pcluster was used to evaluate 574 seed alignments obtained from the Rfam database...... and we identified 71 alignments with significant prediction of inconsistent base pairs and 102 alignments with significant prediction of novel base pairs. Four RNA families were used to illustrate how SARSE can be used to manually or automatically correct the inconsistent base pairs detected by Pcluster...

  2. MIDI Programming in Scheme

    DEFF Research Database (Denmark)

    Nørmark, Kurt

    2010-01-01

    A Scheme representation of Standard MIDI Files is proposed. The Scheme expressions are defined and constrained by an XML-language, which in the starting point is inspired by a MIDI XML event language made by the MIDI Manufactures Association. The representation of Standard MIDI Files in Scheme ma...

  3. Effect of aligning pulse train on the orientation and alignment of a molecule in presence of orienting pulse

    Science.gov (United States)

    Tyagi, Ashish; Maan, Anjali; Ahlawat, Dharamvir Singh; Prasad, Vinod

    2017-02-01

    Field-free molecular alignment is studied theoretically in presence of orienting laser pulse and a delayed Infrared laser (IRL) pulse train. The pulse shapes taken are sine square (sin2) and square. The degree of alignment can be significantly enhanced by the combination of orienting pulse and IRL pulse train compared with only IRL pulse train. Special emphasis is laid on time delay between orienting and aligning pulse, the width and shape of the pulse train. By adjusting the time delay, width and intensity of coupling laser one can suppress a population of particular state while simultaneously enhancing the population of desired states.

  4. ATLAS Inner Detector Alignment

    CERN Document Server

    Bocci, A

    2008-01-01

    The ATLAS experiment is a multi-purpose particle detector that will study high-energy particle collisions produced by the Large Hadron Collider at CERN. In order to achieve its physics goals, the ATLAS tracking requires that the positions of the silicon detector elements have to be known to a precision better than 10 μm. Several track-based alignment algorithms have been developed for the Inner Detector. An extensive validation has been performed with simulated events and real data coming from the ATLAS. Results from such validation are reported in this paper.

  5. CELT optics Alignment Procedure

    Science.gov (United States)

    Mast, Terry S.; Nelson, Jerry E.; Chanan, Gary A.; Noethe, Lothar

    2003-01-01

    The California Extremely Large Telescope (CELT) is a project to build a 30-meter diameter telescope for research in astronomy at visible and infrared wavelengths. The current optical design calls for a primary, secondary, and tertiary mirror with Ritchey-Chretién foci at two Nasmyth platforms. The primary mirror is a mosaic of 1080 actively-stabilized hexagonal segments. This paper summarizes a CELT report that describes a step-by-step procedure for aligning the many degrees of freedom of the CELT optics.

  6. Consistency of non-minimal renormalisation schemes

    CERN Document Server

    Jack, I

    2016-01-01

    Non-minimal renormalisation schemes such as the momentum subtraction scheme (MOM) have frequently been used for physical computations. The consistency of such a scheme relies on the existence of a coupling redefinition linking it to MSbar. We discuss the implementation of this procedure in detail for a general theory and show how to construct the relevant redefinition up to three-loop order, for the case of a general theory of fermions and scalars in four dimensions and a general scalar theory in six dimensions.

  7. Automatic alignment of double optical paths in excimer laser amplifier

    Science.gov (United States)

    Wang, Dahui; Zhao, Xueqing; Hua, Hengqi; Zhang, Yongsheng; Hu, Yun; Yi, Aiping; Zhao, Jun

    2013-05-01

    A kind of beam automatic alignment method used for double paths amplification in the electron pumped excimer laser system is demonstrated. In this way, the beams from the amplifiers can be transferred along the designated direction and accordingly irradiate on the target with high stabilization and accuracy. However, owing to nonexistence of natural alignment references in excimer laser amplifiers, two cross-hairs structure is used to align the beams. Here, one crosshair put into the input beam is regarded as the near-field reference while the other put into output beam is regarded as the far-field reference. The two cross-hairs are transmitted onto Charge Coupled Devices (CCD) by image-relaying structures separately. The errors between intersection points of two cross-talk images and centroid coordinates of actual beam are recorded automatically and sent to closed loop feedback control mechanism. Negative feedback keeps running until preset accuracy is reached. On the basis of above-mentioned design, the alignment optical path is built and the software is compiled, whereafter the experiment of double paths automatic alignment in electron pumped excimer laser amplifier is carried through. Meanwhile, the related influencing factors and the alignment precision are analyzed. Experimental results indicate that the alignment system can achieve the aiming direction of automatic aligning beams in short time. The analysis shows that the accuracy of alignment system is 0.63μrad and the beam maximum restoration error is 13.75μm. Furthermore, the bigger distance between the two cross-hairs, the higher precision of the system is. Therefore, the automatic alignment system has been used in angular multiplexing excimer Main Oscillation Power Amplification (MOPA) system and can satisfy the requirement of beam alignment precision on the whole.

  8. Aligning Astronomical Telescopes via Identification of Stars

    Science.gov (United States)

    Whorton, Mark

    2010-01-01

    A proposed method of automated, precise alignment of a ground-based astronomical telescope would eliminate the need for initial manual alignment. The method, based on automated identification of known stars and other celestial objects in the telescope field of view, would also eliminate the need for an initial estimate of the aiming direction. The method does not require any equipment other than a digital imaging device such as a charge-coupled-device digital imaging camera and control computers of the telescope and camera, all of which are standard components in professional astronomical telescope systems and in high-end amateur astronomical telescope systems. The method could be implemented in software running in the telescope or camera control computer or in an external computer communicating with the telescope pointing mount and camera control computers.

  9. Viewing multiple sequence alignments with the JavaScript Sequence Alignment Viewer (JSAV).

    Science.gov (United States)

    Martin, Andrew C R

    2014-01-01

    The JavaScript Sequence Alignment Viewer (JSAV) is designed as a simple-to-use JavaScript component for displaying sequence alignments on web pages. The display of sequences is highly configurable with options to allow alternative coloring schemes, sorting of sequences and 'dotifying' repeated amino acids. An option is also available to submit selected sequences to another web site, or to other JavaScript code. JSAV is implemented purely in JavaScript making use of the JQuery and JQuery-UI libraries. It does not use any HTML5-specific options to help with browser compatibility. The code is documented using JSDOC and is available from http://www.bioinf.org.uk/software/jsav/.

  10. Scheme Program Documentation Tools

    DEFF Research Database (Denmark)

    Nørmark, Kurt

    2004-01-01

    This paper describes and discusses two different Scheme documentation tools. The first is SchemeDoc, which is intended for documentation of the interfaces of Scheme libraries (APIs). The second is the Scheme Elucidator, which is for internal documentation of Scheme programs. Although the tools...... are separate and intended for different documentation purposes they are related to each other in several ways. Both tools are based on XML languages for tool setup and for documentation authoring. In addition, both tools rely on the LAML framework which---in a systematic way---makes an XML language available...

  11. All about alignment

    CERN Multimedia

    2006-01-01

    The ALICE absorbers, iron wall and superstructure have been installed with great precision. The ALICE front absorber, positioned in the centre of the detector, has been installed and aligned. Weighing more than 400 tonnes, the ALICE absorbers and the surrounding support structures have been installed and aligned with a precision of 1-2 mm, hardly an easy task but a very important one. The ALICE absorbers are made of three parts: the front absorber, a 35-tonne cone-shaped structure, and two small-angle absorbers, long straight cylinder sections weighing 18 and 40 tonnes. The three pieces lined up have a total length of about 17 m. In addition to these, ALICE technicians have installed a 300-tonne iron filter wall made of blocks that fit together like large Lego pieces and a surrounding metal support structure to hold the tracking and trigger chambers. The absorbers house the vacuum chamber and are also the reference surface for the positioning of the tracking and trigger chambers. For this reason, the ab...

  12. Alignment signal extraction of the optically degenerate RSE interferometer using the wave front sensing technique

    Science.gov (United States)

    Sato, S.; Kawamura, S.

    2008-07-01

    The alignment sensing and control scheme of the resonant sideband extraction interferometer is still an unsettled issue for the next-generation gravitational wave antennas. The issue is that it is difficult to extract separate error signals for all 12 angular degrees of freedom, which is mainly arising from the complexity of the optical system and cavity 'degeneracy'. We have suggested a new sensing scheme giving reasonably separated signals which is fully compatible with the length sensing scheme. The key of this idea is to resolve the 'degeneracy' of the optical cavities. By choosing an appropriate Gouy phase for the degenerate cavities, alignment error signals with much less admixtures can be extracted.

  13. Testing the tidal alignment model of galaxy intrinsic alignment

    CERN Document Server

    Blazek, Jonathan; Seljak, Uros

    2011-01-01

    Weak gravitational lensing has become a powerful probe of large-scale structure and cosmological parameters. Precision weak lensing measurements require an understanding of the intrinsic alignment of galaxy ellipticities, which can in turn inform models of galaxy formation. It is hypothesized that elliptical galaxies align with the background tidal field and that this alignment mechanism dominates the correlation between ellipticities on cosmological scales (in the absence of lensing). We use recent large-scale structure measurements from the Sloan Digital Sky Survey to test this picture with several statistics: (1) the correlation between ellipticity and galaxy overdensity, w_{g+}; (2) the intrinsic alignment auto-correlation functions; (3) the correlation functions of curl-free, E, and divergence-free, B, modes (the latter of which is zero in the linear tidal alignment theory); (4) the alignment correlation function, w_g(r_p,theta), a recently developed statistic that generalizes the galaxy correlation func...

  14. Overcoming low-alignment signal contrast induced alignment failure by alignment signal enhancement

    Science.gov (United States)

    Lee, Byeong Soo; Kim, Young Ha; Hwang, Hyunwoo; Lee, Jeongjin; Kong, Jeong Heung; Kang, Young Seog; Paarhuis, Bart; Kok, Haico; de Graaf, Roelof; Weichselbaum, Stefan; Droste, Richard; Mason, Christopher; Aarts, Igor; de Boeij, Wim P.

    2016-03-01

    Overlay is one of the key factors which enables optical lithography extension to 1X node DRAM manufacturing. It is natural that accurate wafer alignment is a prerequisite for good device overlay. However, alignment failures or misalignments are commonly observed in a fab. There are many factors which could induce alignment problems. Low alignment signal contrast is one of the main issues. Alignment signal contrast can be degraded by opaque stack materials or by alignment mark degradation due to processes like CMP. This issue can be compounded by mark sub-segmentation from design rules in combination with double or quadruple spacer process. Alignment signal contrast can be improved by applying new material or process optimization, which sometimes lead to the addition of another process-step with higher costs. If we can amplify the signal components containing the position information and reduce other unwanted signal and background contributions then we can improve alignment performance without process change. In this paper we use ASML's new alignment sensor (as was introduced and released on the NXT:1980Di) and sample wafers with special stacks which can induce poor alignment signal to demonstrate alignment and overlay improvement.

  15. 萨拉齐电厂300 MW循环流化床锅炉机组耦合空气透平系统试验方案研究%Feasibility Study on Test Schemes for Coupling Air Turbine System of Salaqi 300 MW CFB Boiler Unit

    Institute of Scientific and Technical Information of China (English)

    王玉召; 李建锋

    2013-01-01

    To reduce the service power rate of thermal power unit via coupling air turbine system,3 test schemes were proposed for Salaqi 300 MW circulating fluidized bed (CFB) boiler unit,among which schemes 1 and 3 don't need to retrofit the air heater,but scheme 2 does.Based on the survey to performance parameters and price of relevant test facilities,the calculation of heat flux distribution in each scheme was carried out and a comparison was made among the schemes.Results show that by comprehensively considering the energy-saving effect,test cost and impact on normal operation of the unit,scheme 3 is regarded as the best option among all the 3 schemes,of which the energy-saving effect is better than scheme 1 due to its lower exhaust gas temperature,and its test risk is lower than scheme 2 since it is not necessary to retrofit the air heater.%为了验证火力发电机组耦合空气透平系统降低厂用电率的可行性,制定了萨拉齐电厂300MW循环流化床锅炉机组耦合空气透平系统的3个试验方案,其中方案1、方案3不需要改造锅炉空气预热器,而方案2则需要改造锅炉空气预热器.对试验所用设备性能参数及价格进行调研,并对试验方案的热流分布进行了计算和对比.结果表明:在综合考虑3个试验方案的节能效果、试验成本以及对机组正常运行所可能带来的影响后,确定方案3为最佳方案,其与方案1相比,由于排烟温度较低,所以节能效果较好,与方案2相比,由于不改动空气预热器,所以对锅炉部分的改动较小,试验的风险较小.

  16. Pareto optimal pairwise sequence alignment.

    Science.gov (United States)

    DeRonne, Kevin W; Karypis, George

    2013-01-01

    Sequence alignment using evolutionary profiles is a commonly employed tool when investigating a protein. Many profile-profile scoring functions have been developed for use in such alignments, but there has not yet been a comprehensive study of Pareto optimal pairwise alignments for combining multiple such functions. We show that the problem of generating Pareto optimal pairwise alignments has an optimal substructure property, and develop an efficient algorithm for generating Pareto optimal frontiers of pairwise alignments. All possible sets of two, three, and four profile scoring functions are used from a pool of 11 functions and applied to 588 pairs of proteins in the ce_ref data set. The performance of the best objective combinations on ce_ref is also evaluated on an independent set of 913 protein pairs extracted from the BAliBASE RV11 data set. Our dynamic-programming-based heuristic approach produces approximated Pareto optimal frontiers of pairwise alignments that contain comparable alignments to those on the exact frontier, but on average in less than 1/58th the time in the case of four objectives. Our results show that the Pareto frontiers contain alignments whose quality is better than the alignments obtained by single objectives. However, the task of identifying a single high-quality alignment among those in the Pareto frontier remains challenging.

  17. Fuzzy adaptive strong tracking scaled unscented Kalman filter for initial alignment of large misalignment angles.

    Science.gov (United States)

    Li, Jing; Song, Ningfang; Yang, Gongliu; Jiang, Rui

    2016-07-01

    In the initial alignment process of strapdown inertial navigation system (SINS), large misalignment angles always bring nonlinear problem, which can usually be processed using the scaled unscented Kalman filter (SUKF). In this paper, the problem of large misalignment angles in SINS alignment is further investigated, and the strong tracking scaled unscented Kalman filter (STSUKF) is proposed with fixed parameters to improve convergence speed, while these parameters are artificially constructed and uncertain in real application. To further improve the alignment stability and reduce the parameters selection, this paper proposes a fuzzy adaptive strategy combined with STSUKF (FUZZY-STSUKF). As a result, initial alignment scheme of large misalignment angles based on FUZZY-STSUKF is designed and verified by simulations and turntable experiment. The results show that the scheme improves the accuracy and convergence speed of SINS initial alignment compared with those based on SUKF and STSUKF.

  18. Fuzzy adaptive strong tracking scaled unscented Kalman filter for initial alignment of large misalignment angles

    Science.gov (United States)

    Li, Jing; Song, Ningfang; Yang, Gongliu; Jiang, Rui

    2016-07-01

    In the initial alignment process of strapdown inertial navigation system (SINS), large misalignment angles always bring nonlinear problem, which can usually be processed using the scaled unscented Kalman filter (SUKF). In this paper, the problem of large misalignment angles in SINS alignment is further investigated, and the strong tracking scaled unscented Kalman filter (STSUKF) is proposed with fixed parameters to improve convergence speed, while these parameters are artificially constructed and uncertain in real application. To further improve the alignment stability and reduce the parameters selection, this paper proposes a fuzzy adaptive strategy combined with STSUKF (FUZZY-STSUKF). As a result, initial alignment scheme of large misalignment angles based on FUZZY-STSUKF is designed and verified by simulations and turntable experiment. The results show that the scheme improves the accuracy and convergence speed of SINS initial alignment compared with those based on SUKF and STSUKF.

  19. Spontaneous CP violation in the 2HDM: physical conditions and the alignment limit

    CERN Document Server

    Grzadkowski, B; Osland, P

    2016-01-01

    For the general Two-Higgs-Doublet model, we present conditions for having spontaneous CP violation, in terms of physical masses and couplings. These relations involve the charged-Higgs mass, its cubic couplings with neutral scalars and quartic coupling, and become particularly simple in the alignment limit. In the simplified model with softly broken $Z_2$ symmetry, some deviation from alignment is required for spontaneous CP violation to be present.

  20. Detailed source term estimation of the atmospheric release for the Fukushima Daiichi Nuclear Power Station accident by coupling simulations of atmospheric dispersion model with improved deposition scheme and oceanic dispersion model

    Directory of Open Access Journals (Sweden)

    G. Katata

    2014-06-01

    Full Text Available Temporal variations in the amount of radionuclides released into the atmosphere during the Fukushima Dai-ichi Nuclear Power Station (FNPS1 accident and their atmospheric and marine dispersion are essential to evaluate the environmental impacts and resultant radiological doses to the public. In this paper, we estimate a detailed time trend of atmospheric releases during the accident by combining environmental monitoring data with atmospheric model simulations from WSPEEDI-II (Worldwide version of System for Prediction of Environmental Emergency Dose Information, and simulations from the oceanic dispersion model SEA-GEARN-FDM, both developed by the authors. A sophisticated deposition scheme, which deals with dry and fogwater depositions, cloud condensation nuclei (CCN activation and subsequent wet scavenging due to mixed-phase cloud microphysics (in-cloud scavenging for radioactive iodine gas (I2 and CH3I and other particles (CsI, Cs, and Te, was incorporated into WSPEEDI-II to improve the surface deposition calculations. The fallout to the ocean surface calculated by WSPEEDI-II was used as input data for the SEA-GEARN-FDM calculations. Reverse and inverse source-term estimation methods based on coupling the simulations from both models was adopted using air dose rates and concentrations, and sea surface concentrations. The results revealed that the major releases of radionuclides due to FNPS1 accident occurred in the following periods during March 2011: the afternoon of 12 March due to the wet venting and hydrogen explosion at Unit 1, the morning of 13 March after the venting event at Unit 3, midnight of 14 March when the SRV (Safely Relief Valve at Unit 2 was opened three times, the morning and night of 15 March, and the morning of 16 March. According to the simulation results, the highest radioactive contamination areas around FNPS1 were created from 15 to 16 March by complicated interactions among rainfall, plume movements, and the temporal

  1. Detailed source term estimation of the atmospheric release for the Fukushima Daiichi Nuclear Power Station accident by coupling simulations of atmospheric dispersion model with improved deposition scheme and oceanic dispersion model

    Science.gov (United States)

    Katata, G.; Chino, M.; Kobayashi, T.; Terada, H.; Ota, M.; Nagai, H.; Kajino, M.; Draxler, R.; Hort, M. C.; Malo, A.; Torii, T.; Sanada, Y.

    2014-06-01

    Temporal variations in the amount of radionuclides released into the atmosphere during the Fukushima Dai-ichi Nuclear Power Station (FNPS1) accident and their atmospheric and marine dispersion are essential to evaluate the environmental impacts and resultant radiological doses to the public. In this paper, we estimate a detailed time trend of atmospheric releases during the accident by combining environmental monitoring data with atmospheric model simulations from WSPEEDI-II (Worldwide version of System for Prediction of Environmental Emergency Dose Information), and simulations from the oceanic dispersion model SEA-GEARN-FDM, both developed by the authors. A sophisticated deposition scheme, which deals with dry and fogwater depositions, cloud condensation nuclei (CCN) activation and subsequent wet scavenging due to mixed-phase cloud microphysics (in-cloud scavenging) for radioactive iodine gas (I2 and CH3I) and other particles (CsI, Cs, and Te), was incorporated into WSPEEDI-II to improve the surface deposition calculations. The fallout to the ocean surface calculated by WSPEEDI-II was used as input data for the SEA-GEARN-FDM calculations. Reverse and inverse source-term estimation methods based on coupling the simulations from both models was adopted using air dose rates and concentrations, and sea surface concentrations. The results revealed that the major releases of radionuclides due to FNPS1 accident occurred in the following periods during March 2011: the afternoon of 12 March due to the wet venting and hydrogen explosion at Unit 1, the morning of 13 March after the venting event at Unit 3, midnight of 14 March when the SRV (Safely Relief Valve) at Unit 2 was opened three times, the morning and night of 15 March, and the morning of 16 March. According to the simulation results, the highest radioactive contamination areas around FNPS1 were created from 15 to 16 March by complicated interactions among rainfall, plume movements, and the temporal variation of

  2. Coupled transverse motion

    Energy Technology Data Exchange (ETDEWEB)

    Teng, L.C.

    1989-01-01

    The magnetic field in an accelerator or a storage ring is usually so designed that the horizontal (x) and the vertical (y) motions of an ion are uncoupled. However, because of imperfections in construction and alignment, some small coupling is unavoidable. In this lecture, we discuss in a general way what is known about the behaviors of coupled motions in two degrees-of-freedom. 11 refs., 6 figs.

  3. Onorbit IMU alignment error budget

    Science.gov (United States)

    Corson, R. W.

    1980-01-01

    The Star Tracker, Crew Optical Alignment Sight (COAS), and Inertial Measurement Unit (IMU) from a complex navigation system with a multitude of error sources were combined. A complete list of the system errors is presented. The errors were combined in a rational way to yield an estimate of the IMU alignment accuracy for STS-1. The expected standard deviation in the IMU alignment error for STS-1 type alignments was determined to be 72 arc seconds per axis for star tracker alignments and 188 arc seconds per axis for COAS alignments. These estimates are based on current knowledge of the star tracker, COAS, IMU, and navigation base error specifications, and were partially verified by preliminary Monte Carlo analysis.

  4. Robust Scheme for Long-Distance Teleportation of an Unknown Atomic State

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    A scheme is presented for the long-distance teleportation of an unknown atomic state between two separated cavities. The scheme is based on the Raman coupling and cavity decay. In the scheme, the effective atom-cavity coupling strength is much smaller than the cavity decay rate and thus cavities of high quality factor are unnecesssary.

  5. Convertible Proxy Signcryption Scheme

    Institute of Scientific and Technical Information of China (English)

    李继国; 李建中; 曹珍富; 张亦辰

    2004-01-01

    In 1996, Mambo et al introduced the concept of proxy signature. However, proxy signature can only provide the delegated authenticity and cannot provide confidentiality. Recently, Gamage et al and Chan and Wei proposed different proxy signcryption schemes respectively, which extended the concept of proxy signature.However, only the specified receiver can decrypt and verify the validity of proxy signcryption in their schemes.To protect the receiver' s benefit in case of a later dispute, Wu and Hsu proposed a convertible authenticated encryption scheme, which carn enable the receiver to convert signature into an ordinary one that can be verified by anyone. Based on Wu and Hsu' s scheme and improved Kim' s scheme, we propose a convertible proxy signcryption scheme. The security of the proposed scheme is based on the intractability of reversing the one-way hash function and solving the discrete logarithm problem. The proposed scheme can satisfy all properties of strong proxy signature and withstand the public key substitution attack and does not use secure channel. In addition, the proposed scheme can be extended to convertible threshold proxy signcryption scheme.

  6. Lunar Alignments - Identification and Analysis

    Science.gov (United States)

    González-García, A. César

    Lunar alignments are difficult to establish given the apparent lack of written accounts clearly pointing toward lunar alignments for individual temples. While some individual cases are reviewed and highlighted, the weight of the proof must fall on statistical sampling. Some definitions for the lunar alignments are provided in order to clarify the targets, and thus, some new tools are provided to try to test the lunar hypothesis in several cases, especially in megalithic astronomy.

  7. GraphAlignment: Bayesian pairwise alignment of biological networks

    Directory of Open Access Journals (Sweden)

    Kolář Michal

    2012-11-01

    Full Text Available Abstract Background With increased experimental availability and accuracy of bio-molecular networks, tools for their comparative and evolutionary analysis are needed. A key component for such studies is the alignment of networks. Results We introduce the Bioconductor package GraphAlignment for pairwise alignment of bio-molecular networks. The alignment incorporates information both from network vertices and network edges and is based on an explicit evolutionary model, allowing inference of all scoring parameters directly from empirical data. We compare the performance of our algorithm to an alternative algorithm, Græmlin 2.0. On simulated data, GraphAlignment outperforms Græmlin 2.0 in several benchmarks except for computational complexity. When there is little or no noise in the data, GraphAlignment is slower than Græmlin 2.0. It is faster than Græmlin 2.0 when processing noisy data containing spurious vertex associations. Its typical case complexity grows approximately as O(N2.6. On empirical bacterial protein-protein interaction networks (PIN and gene co-expression networks, GraphAlignment outperforms Græmlin 2.0 with respect to coverage and specificity, albeit by a small margin. On large eukaryotic PIN, Græmlin 2.0 outperforms GraphAlignment. Conclusions The GraphAlignment algorithm is robust to spurious vertex associations, correctly resolves paralogs, and shows very good performance in identification of homologous vertices defined by high vertex and/or interaction similarity. The simplicity and generality of GraphAlignment edge scoring makes the algorithm an appropriate choice for global alignment of networks.

  8. Open Microwave Cavity for use in a Purcell Enhancement Cooling Scheme

    CERN Document Server

    Evetts, N; Bizzotto, D; Longuevergne, D; Hardy, W N

    2016-01-01

    A microwave cavity is described which can be used to cool lepton plasmas for potential use in synthesis of antihydrogen. The cooling scheme is an incarnation of the Purcell Effect: when plasmas are coupled to a microwave cavity, the plasma cooling rate is resonantly enhanced through increased spontaneous emission of cyclotron radiation. The cavity forms a three electrode section of a Penning-Malmberg trap and has a bulged cylindrical geometry with open ends aligned with the magnetic trapping axis. This allows plasmas to be injected and removed from the cavity without the need for moving parts while maintaining high quality factors for resonant modes. The cavity includes unique surface preparations for adjusting the cavity quality factor and achieving anti-static shielding using thin layers of nichrome and colloidal graphite respectively. Geometric design considerations for a cavity with strong cooling power and low equilibrium plasma temperatures are discussed. Cavities of this weak-bulge design will be appli...

  9. A generalized scheme for designing multistable continuous dynamical systems

    Indian Academy of Sciences (India)

    PAL SANTINATH; SAHOO BANSHIDHAR; PORIA SWARUP

    2016-06-01

    In this paper, a generalized scheme is proposed for designing multistable continuous dynamical systems. The scheme is based on the concept of partial synchronization of states and the concept of constants of motion. The most important observation is that by coupling two mdimensional dynamical systems, multistable nature can be obtained if i number of variables of the two systems are completely synchronized and j number of variables keep a constant difference between them i.e., their differences are constants of motion, where $i+j = m$ and $1 \\le i, j \\le m−1$. The proposed scheme is illustrated by taking coupled Lorenz systems and coupled chaotic Lorenzlike systems. According to the scheme, two coupled systems reduce to single modified system withsome initial condition-dependent parameters. Time evolution plots, phase diagrams, variation of maximum Lyapunov exponent and bifurcation diagrams of the systems are presented to show the multistable nature of the coupled systems.

  10. Cryogenic Pupil Alignment Test Architecture for Aberrated Pupil Images

    Science.gov (United States)

    Bos, Brent; Kubalak, David A.; Antonille, Scott; Ohl, Raymond; Hagopian, John G.

    2009-01-01

    A document describes cryogenic test architecture for the James Webb Space Telescope (JWST) integrated science instrument module (ISIM). The ISIM element primarily consists of a mechanical metering structure, three science instruments, and a fine guidance sensor. One of the critical optomechanical alignments is the co-registration of the optical telescope element (OTE) exit pupil with the entrance pupils of the ISIM instruments. The test architecture has been developed to verify that the ISIM element will be properly aligned with the nominal OTE exit pupil when the two elements come together. The architecture measures three of the most critical pupil degrees-of-freedom during optical testing of the ISIM element. The pupil measurement scheme makes use of specularly reflective pupil alignment references located inside the JWST instruments, ground support equipment that contains a pupil imaging module, an OTE simulator, and pupil viewing channels in two of the JWST flight instruments. Pupil alignment references (PARs) are introduced into the instrument, and their reflections are checked using the instrument's mirrors. After the pupil imaging module (PIM) captures a reflected PAR image, the image will be analyzed to determine the relative alignment offset. The instrument pupil alignment preferences are specularly reflective mirrors with non-reflective fiducials, which makes the test architecture feasible. The instrument channels have fairly large fields of view, allowing PAR tip/tilt tolerances on the order of 0.5deg.

  11. Chaotic coupling synchronization of hyperchaotic oscillators

    Institute of Scientific and Technical Information of China (English)

    Zou Yan-Li; Zhu Jie; Chen Guan-Rong

    2005-01-01

    In this paper, two kinds of chaotic coupling synchronization schemes are presented. The synchronizability of the coupled hyperchaotic oscillators is proved mathematically and the numerical simulation is also carried out. The numerical calculation of the largest conditional Lyapunov exponent shows that in a given range of coupling strengths,chaotic-coupling synchronization is quicker than the typical continuous-coupling synchronization.

  12. Efficient Threshold Signature Scheme

    Directory of Open Access Journals (Sweden)

    Sattar J Aboud

    2012-01-01

    Full Text Available In this paper, we introduce a new threshold signature RSA-typed scheme. The proposed scheme has the characteristics of un-forgeable and robustness in random oracle model. Also, signature generation and verification is entirely non-interactive. In addition, the length of the entity signature participate is restricted by a steady times of the length of the RSA signature modulus. Also, the signing process of the proposed scheme is more efficient in terms of time complexity and interaction.

  13. Stateless Transitive Signature Schemes

    Institute of Scientific and Technical Information of China (English)

    MA Chun-guang; CAI Man-chun; YANG Yi-xian

    2004-01-01

    A new practical method is introduced to transform the stateful transitive signature scheme to stateless one without the loss of security. According to the approach, two concrete stateless transitive signature schemes based on Factoring and RSA are presented respectively. Under the assumption of the hardness of factoring and one-more- RSA-inversion problem, both two schemes are secure under the adaptive chosen-message attacks in random oracle model.

  14. Pyro-Align: Sample-Align based Multiple Alignment system for Pyrosequencing Reads of Large Number

    CERN Document Server

    Saeed, Fahad

    2009-01-01

    Pyro-Align is a multiple alignment program specifically designed for pyrosequencing reads of huge number. Multiple sequence alignment is shown to be NP-hard and heuristics are designed for approximate solutions. Multiple sequence alignment of pyrosequenceing reads is complex mainly because of 2 factors. One being the huge number of reads, making the use of traditional heuristics,that scale very poorly for large number, unsuitable. The second reason is that the alignment cannot be performed arbitrarily, because the position of the reads with respect to the original genome is important and has to be taken into account.In this report we present a short description of the multiple alignment system for pyrosequencing reads.

  15. Constrained-DFT method for accurate energy-level alignment of metal/molecule interfaces

    KAUST Repository

    Souza, A. M.

    2013-10-07

    We present a computational scheme for extracting the energy-level alignment of a metal/molecule interface, based on constrained density functional theory and local exchange and correlation functionals. The method, applied here to benzene on Li(100), allows us to evaluate charge-transfer energies, as well as the spatial distribution of the image charge induced on the metal surface. We systematically study the energies for charge transfer from the molecule to the substrate as function of the molecule-substrate distance, and investigate the effects arising from image-charge confinement and local charge neutrality violation. For benzene on Li(100) we find that the image-charge plane is located at about 1.8 Å above the Li surface, and that our calculated charge-transfer energies compare perfectly with those obtained with a classical electrostatic model having the image plane located at the same position. The methodology outlined here can be applied to study any metal/organic interface in the weak coupling limit at the computational cost of a total energy calculation. Most importantly, as the scheme is based on total energies and not on correcting the Kohn-Sham quasiparticle spectrum, accurate results can be obtained with local/semilocal exchange and correlation functionals. This enables a systematic approach to convergence.

  16. Mask alignment system for semiconductor processing

    Energy Technology Data Exchange (ETDEWEB)

    Webb, Aaron P.; Carlson, Charles T.; Weaver, William T.; Grant, Christopher N.

    2017-02-14

    A mask alignment system for providing precise and repeatable alignment between ion implantation masks and workpieces. The system includes a mask frame having a plurality of ion implantation masks loosely connected thereto. The mask frame is provided with a plurality of frame alignment cavities, and each mask is provided with a plurality of mask alignment cavities. The system further includes a platen for holding workpieces. The platen may be provided with a plurality of mask alignment pins and frame alignment pins configured to engage the mask alignment cavities and frame alignment cavities, respectively. The mask frame can be lowered onto the platen, with the frame alignment cavities moving into registration with the frame alignment pins to provide rough alignment between the masks and workpieces. The mask alignment cavities are then moved into registration with the mask alignment pins, thereby shifting each individual mask into precise alignment with a respective workpiece.

  17. Sigma: multiple alignment of weakly-conserved non-coding DNA sequence

    Directory of Open Access Journals (Sweden)

    Siddharthan Rahul

    2006-03-01

    Full Text Available Abstract Background Existing tools for multiple-sequence alignment focus on aligning protein sequence or protein-coding DNA sequence, and are often based on extensions to Needleman-Wunsch-like pairwise alignment methods. We introduce a new tool, Sigma, with a new algorithm and scoring scheme designed specifically for non-coding DNA sequence. This problem acquires importance with the increasing number of published sequences of closely-related species. In particular, studies of gene regulation seek to take advantage of comparative genomics, and recent algorithms for finding regulatory sites in phylogenetically-related intergenic sequence require alignment as a preprocessing step. Much can also be learned about evolution from intergenic DNA, which tends to evolve faster than coding DNA. Sigma uses a strategy of seeking the best possible gapless local alignments (a strategy earlier used by DiAlign, at each step making the best possible alignment consistent with existing alignments, and scores the significance of the alignment based on the lengths of the aligned fragments and a background model which may be supplied or estimated from an auxiliary file of intergenic DNA. Results Comparative tests of sigma with five earlier algorithms on synthetic data generated to mimic real data show excellent performance, with Sigma balancing high "sensitivity" (more bases aligned with effective filtering of "incorrect" alignments. With real data, while "correctness" can't be directly quantified for the alignment, running the PhyloGibbs motif finder on pre-aligned sequence suggests that Sigma's alignments are superior. Conclusion By taking into account the peculiarities of non-coding DNA, Sigma fills a gap in the toolbox of bioinformatics.

  18. General phenomenology of ionization from aligned molecular ensembles

    CERN Document Server

    Hockett, Paul

    2014-01-01

    Single and multi-photon ionization of aligned molecular ensembles is examined, with a particular focus on the link between the molecular axis distribution and observable in various angle-integrated and angle-resolved measurements. To maintain generality the problem is treated geometrically, with the aligned ensemble cast in terms of axis distribution moments, and the response of observables in terms of couplings to these moments. Within this formalism the angular momentum coupling is treated analytically, allowing for general characteristics - independent of the details of the ionization dynamics of a specific molecule - to be determined. Limiting cases are explored in order to provide a phenomenology which should be readily applicable to a range of experimental measurements, and illustrate how observables can be sensitive to fine details of the alignment, i.e. higher-order moments of the axis distribution, which are often neglected in experimental studies. We hope that this detailed and comprehensive treatme...

  19. CATO: The Clone Alignment Tool.

    Directory of Open Access Journals (Sweden)

    Peter V Henstock

    Full Text Available High-throughput cloning efforts produce large numbers of sequences that need to be aligned, edited, compared with reference sequences, and organized as files and selected clones. Different pieces of software are typically required to perform each of these tasks. We have designed a single piece of software, CATO, the Clone Alignment Tool, that allows a user to align, evaluate, edit, and select clone sequences based on comparisons to reference sequences. The input and output are designed to be compatible with standard data formats, and thus suitable for integration into a clone processing pipeline. CATO provides both sequence alignment and visualizations to facilitate the analysis of cloning experiments. The alignment algorithm matches each of the relevant candidate sequences against each reference sequence. The visualization portion displays three levels of matching: 1 a top-level summary of the top candidate sequences aligned to each reference sequence, 2 a focused alignment view with the nucleotides of matched sequences displayed against one reference sequence, and 3 a pair-wise alignment of a single reference and candidate sequence pair. Users can select the minimum matching criteria for valid clones, edit or swap reference sequences, and export the results to a summary file as part of the high-throughput cloning workflow.

  20. CATO: The Clone Alignment Tool.

    Science.gov (United States)

    Henstock, Peter V; LaPan, Peter

    2016-01-01

    High-throughput cloning efforts produce large numbers of sequences that need to be aligned, edited, compared with reference sequences, and organized as files and selected clones. Different pieces of software are typically required to perform each of these tasks. We have designed a single piece of software, CATO, the Clone Alignment Tool, that allows a user to align, evaluate, edit, and select clone sequences based on comparisons to reference sequences. The input and output are designed to be compatible with standard data formats, and thus suitable for integration into a clone processing pipeline. CATO provides both sequence alignment and visualizations to facilitate the analysis of cloning experiments. The alignment algorithm matches each of the relevant candidate sequences against each reference sequence. The visualization portion displays three levels of matching: 1) a top-level summary of the top candidate sequences aligned to each reference sequence, 2) a focused alignment view with the nucleotides of matched sequences displayed against one reference sequence, and 3) a pair-wise alignment of a single reference and candidate sequence pair. Users can select the minimum matching criteria for valid clones, edit or swap reference sequences, and export the results to a summary file as part of the high-throughput cloning workflow.

  1. RNA Structural Alignments, Part I

    DEFF Research Database (Denmark)

    Havgaard, Jakob Hull; Gorodkin, Jan

    2014-01-01

    Simultaneous alignment and secondary structure prediction of RNA sequences is often referred to as "RNA structural alignment." A class of the methods for structural alignment is based on the principles proposed by Sankoff more than 25 years ago. The Sankoff algorithm simultaneously folds and alig...... the methods based on the Sankoff algorithm. All the practical implementations of the algorithm use heuristics to make them run in reasonable time and memory. These heuristics are also described in this chapter.......Simultaneous alignment and secondary structure prediction of RNA sequences is often referred to as "RNA structural alignment." A class of the methods for structural alignment is based on the principles proposed by Sankoff more than 25 years ago. The Sankoff algorithm simultaneously folds and aligns...... two or more sequences. The advantage of this algorithm over those that separate the folding and alignment steps is that it makes better predictions. The disadvantage is that it is slower and requires more computer memory to run. The amount of computational resources needed to run the Sankoff algorithm...

  2. Lexical alignment in triadic communication.

    Science.gov (United States)

    Foltz, Anouschka; Gaspers, Judith; Thiele, Kristina; Stenneken, Prisca; Cimiano, Philipp

    2015-01-01

    Lexical alignment refers to the adoption of one's interlocutor's lexical items. Accounts of the mechanisms underlying such lexical alignment differ (among other aspects) in the role assigned to addressee-centered behavior. In this study, we used a triadic communicative situation to test which factors may modulate the extent to which participants' lexical alignment reflects addressee-centered behavior. Pairs of naïve participants played a picture matching game and received information about the order in which pictures were to be matched from a voice over headphones. On critical trials, participants did or did not hear a name for the picture to be matched next over headphones. Importantly, when the voice over headphones provided a name, it did not match the name that the interlocutor had previously used to describe the object. Participants overwhelmingly used the word that the voice over headphones provided. This result points to non-addressee-centered behavior and is discussed in terms of disrupting alignment with the interlocutor as well as in terms of establishing alignment with the voice over headphones. In addition, the type of picture (line drawing vs. tangram shape) independently modulated lexical alignment, such that participants showed more lexical alignment to their interlocutor for (more ambiguous) tangram shapes compared to line drawings. Overall, the results point to a rather large role for non-addressee-centered behavior during lexical alignment.

  3. Vacuum Alignment with more Flavors

    DEFF Research Database (Denmark)

    Ryttov, Thomas

    2014-01-01

    We study the alignment of the vacuum in gauge theories with $N_f$ Dirac fermions transforming according to a complex representation of the gauge group. The alignment of the vacuum is produced by adding a small mass perturbation to the theory. We study in detail the $N_f=2,3$ and $4$ case. For $N...

  4. Parallel progressive multiple sequence alignment on reconfigurable meshes

    Directory of Open Access Journals (Sweden)

    Nguyen Ken D

    2011-12-01

    Full Text Available Abstract Background One of the most fundamental and challenging tasks in bio-informatics is to identify related sequences and their hidden biological significance. The most popular and proven best practice method to accomplish this task is aligning multiple sequences together. However, multiple sequence alignment is a computing extensive task. In addition, the advancement in DNA/RNA and Protein sequencing techniques has created a vast amount of sequences to be analyzed that exceeding the capability of traditional computing models. Therefore, an effective parallel multiple sequence alignment model capable of resolving these issues is in a great demand. Results We design O(1 run-time solutions for both local and global dynamic programming pair-wise alignment algorithms on reconfigurable mesh computing model. To align m sequences with max length n, we combining the parallel pair-wise dynamic programming solutions with newly designed parallel components. We successfully reduce the progressive multiple sequence alignment algorithm's run-time complexity from O(m × n4 to O(m using O(m × n3 processing units for scoring schemes that use three distinct values for match/mismatch/gap-extension. The general solution to multiple sequence alignment algorithm takes O(m × n4 processing units and completes in O(m time. Conclusions To our knowledge, this is the first time the progressive multiple sequence alignment algorithm is completely parallelized with O(m run-time. We also provide a new parallel algorithm for the Longest Common Subsequence (LCS with O(1 run-time using O(n3 processing units. This is a big improvement over the current best constant-time algorithm that uses O(n4 processing units.

  5. The CMS Silicon Tracker Alignment

    CERN Document Server

    Castello, R

    2008-01-01

    The alignment of the Strip and Pixel Tracker of the Compact Muon Solenoid experiment, with its large number of independent silicon sensors and its excellent spatial resolution, is a complex and challenging task. Besides high precision mounting, survey measurements and the Laser Alignment System, track-based alignment is needed to reach the envisaged precision.\\\\ Three different algorithms for track-based alignment were successfully tested on a sample of cosmic-ray data collected at the Tracker Integration Facility, where 15\\% of the Tracker was tested. These results, together with those coming from the CMS global run, will provide the basis for the full-scale alignment of the Tracker, which will be carried out with the first \\emph{p-p} collisions.

  6. Alignment of flexible protein structures.

    Science.gov (United States)

    Shatsky, M; Fligelman, Z Y; Nussinov, R; Wolfson, H J

    2000-01-01

    We present two algorithms which align flexible protein structures. Both apply efficient structural pattern detection and graph theoretic techniques. The FlexProt algorithm simultaneously detects the hinge regions and aligns the rigid subparts of the molecules. It does it by efficiently detecting maximal congruent rigid fragments in both molecules and calculating their optimal arrangement which does not violate the protein sequence order. The FlexMol algorithm is sequence order independent, yet requires as input the hypothesized hinge positions. Due its sequence order independence it can also be applied to protein-protein interface matching and drug molecule alignment. It aligns the rigid parts of the molecule using the Geometric Hashing method and calculates optimal connectivity among these parts by graph-theoretic techniques. Both algorithms are highly efficient even compared with rigid structure alignment algorithms. Typical running times on a standard desktop PC (400 MHz) are about 7 seconds for FlexProt and about 1 minute for FlexMol.

  7. Alignments in the nobelium isotopes

    Institute of Scientific and Technical Information of China (English)

    ZHENG Shi-Zie; XU Fu-Rong; YUAN Cen-Xi; QI Chong

    2009-01-01

    Total-Routhian-Surface calculations have been performed to investigate the deformation and align-ment properties of the No isotopes. It is found that normal deformed and superdeformed states in these nuclei can coexist at low excitation energies. In neutron-deficient No isotopes, the superdeformed shapes can even become the ground states. Moreover, we plotted the kinematic moments of inertia of the No isotopes, which follow very nicely available experimental data. It is noted that, as the rotational frequency increases, align-ments develop at hω=0.2-0.3 MeV. Our calculations show that the occupation of the vj orbital plays an important role in the alignments of the No isotopes.

  8. Effective Electrocardiogram Steganography Based on Coefficient Alignment.

    Science.gov (United States)

    Yang, Ching-Yu; Wang, Wen-Fong

    2016-03-01

    This study presents two types of data hiding methods based on coefficient alignment for electrocardiogram (ECG) signals, namely, lossy and reversible ECG steganographys. The lossy method is divided into high-quality and high-capacity ECG steganography, both of which are capable of hiding confidential patient data in ECG signals. The reversible data hiding method can not only hide secret messages but also completely restore the original ECG signal after bit extraction. Simulations confirmed that the perceived quality generated by the lossy ECG steganography methods was good, while hiding capacity was acceptable. In addition, these methods have a certain degree of robustness, which is rare in conventional ECG stegangraphy schemes. Moreover, the proposed reversible ECG steganography method can not only successfully extract hidden messages but also completely recover the original ECG data.

  9. Space Mirror Alignment System

    Science.gov (United States)

    Jau, Bruno M.; McKinney, Colin; Smythe, Robert F.; Palmer, Dean L.

    2011-01-01

    An optical alignment mirror mechanism (AMM) has been developed with angular positioning accuracy of +/-0.2 arcsec. This requires the mirror s linear positioning actuators to have positioning resolutions of +/-112 nm to enable the mirror to meet the angular tip/tilt accuracy requirement. Demonstrated capabilities are 0.1 arc-sec angular mirror positioning accuracy, which translates into linear positioning resolutions at the actuator of 50 nm. The mechanism consists of a structure with sets of cross-directional flexures that enable the mirror s tip and tilt motion, a mirror with its kinematic mount, and two linear actuators. An actuator comprises a brushless DC motor, a linear ball screw, and a piezoelectric brake that holds the mirror s position while the unit is unpowered. An interferometric linear position sensor senses the actuator s position. The AMMs were developed for an Astrometric Beam Combiner (ABC) optical bench, which is part of an interferometer development. Custom electronics were also developed to accommodate the presence of multiple AMMs within the ABC and provide a compact, all-in-one solution to power and control the AMMs.

  10. Resonator Coupling of Two Ring Cavity, Argon-Ion Lasers.

    Science.gov (United States)

    1987-12-01

    mirrors CMi and CM2, which coupled the backward traveling-waves, and coupling beamsplitters CB1 and CB2 , which coupled the forward traveling waves...these elements were replaced with flat, 32% beamsplitters. Alignment of beamsplitters CB1 and CB2 was difficult because each output beam was...Output Couplers--- --- CM2 C B 1 CB2 Figure 4: Orientation of Coupling Beamsplitters. Coupling beamsplitters CB1 and CB2 were roughly aligned such that

  11. Magnetic alignment and the Poisson alignment reference system

    Science.gov (United States)

    Griffith, L. V.; Schenz, R. F.; Sommargren, G. E.

    1990-08-01

    Three distinct metrological operations are necessary to align a free-electron laser (FEL): the magnetic axis must be located, a straight line reference (SLR) must be generated, and the magnetic axis must be related to the SLR. This article begins with a review of the motivation for developing an alignment system that will assure better than 100-μm accuracy in the alignment of the magnetic axis throughout an FEL. The 100-μm accuracy is an error circle about an ideal axis for 300 m or more. The article describes techniques for identifying the magnetic axes of solenoids, quadrupoles, and wiggler poles. Propagation of a laser beam is described to the extent of revealing sources of nonlinearity in the beam. Development of a straight-line reference based on the Poisson line, a diffraction effect, is described in detail. Spheres in a large-diameter laser beam create Poisson lines and thus provide a necessary mechanism for gauging between the magnetic axis and the SLR. Procedures for installing FEL components and calibrating alignment fiducials to the magnetic axes of the components are also described. The Poisson alignment reference system should be accurate to 25 μm over 300 m, which is believed to be a factor-of-4 improvement over earlier techniques. An error budget shows that only 25% of the total budgeted tolerance is used for the alignment reference system, so the remaining tolerances should fall within the allowable range for FEL alignment.

  12. Multiresolution signal decomposition schemes

    NARCIS (Netherlands)

    Goutsias, J.; Heijmans, H.J.A.M.

    1998-01-01

    [PNA-R9810] Interest in multiresolution techniques for signal processing and analysis is increasing steadily. An important instance of such a technique is the so-called pyramid decomposition scheme. This report proposes a general axiomatic pyramid decomposition scheme for signal analysis and synthes

  13. A Switched Diversity Scheme for Massive MIMO Systems

    Directory of Open Access Journals (Sweden)

    Qianya Wang

    2014-01-01

    Full Text Available With the constraint of antenna space, spatial correlation and mutual coupling must be considered to accurately predict the system performance for massive MIMO systems. Increasing the antenna quantity can degrade the system performance due to mutual coupling. Antenna selection systems have better performance and lower hardware cost than full-MIMO systems. However, the conventional selection combining (SC scheme consumes a great amount of training overhead and has high operational complexity in the presence of mutual coupling. This paper proposes a group switch-and-examine combining (GSEC scheme for massive MIMO systems with the spatial correlation and mutual coupling existing at both the transmitter and receiver. Simulation results demonstrate that the proposed GSEC scheme provides better effective capacity performance and lower operational complexity than the conventional selection combining (SC and full-MIMO scheme.

  14. General Projective Synchronization and Fractional Order Chaotic Masking Scheme

    Institute of Scientific and Technical Information of China (English)

    Shi-Quan Shao

    2008-01-01

    In this paper, a fractional order chaotic masking scheme used for secure communication is introduced. Based on the general projective synchronization of two coupled fractional Chert systems, a popular masking scheme is designed. Numerical example is given to demonstrate the effectiveness of the proposed method.

  15. General Projective Synchronization and Fractional Order Chaotic Masking Scheme

    Institute of Scientific and Technical Information of China (English)

    Shi-Quan Shao

    2008-01-01

    In this paper, a fractional order chaoticmasking scheme used for secure communication isintroduced. Based on the general projectivesynchronization of two coupled fractional Chen systems,a popular masking scheme is designed. Numericalexample is given to demonstrate the effectiveness of theproposed method.

  16. Aligning for Innovation - Alignment Strategy to Drive Innovation

    Science.gov (United States)

    Johnson, Hurel; Teltschik, David; Bussey, Horace, Jr.; Moy, James

    2010-01-01

    With the sudden need for innovation that will help the country achieve its long-term space exploration objectives, the question of whether NASA is aligned effectively to drive the innovation that it so desperately needs to take space exploration to the next level should be entertained. Authors such as Robert Kaplan and David North have noted that companies that use a formal system for implementing strategy consistently outperform their peers. They have outlined a six-stage management systems model for implementing strategy, which includes the aligning of the organization towards its objectives. This involves the alignment of the organization from the top down. This presentation will explore the impacts of existing U.S. industrial policy on technological innovation; assess the current NASA organizational alignment and its impacts on driving technological innovation; and finally suggest an alternative approach that may drive the innovation needed to take the world to the next level of space exploration, with NASA truly leading the way.

  17. A Fuzzy Commitment Scheme

    CERN Document Server

    Al-saggaf, Alawi A

    2008-01-01

    This paper attempt has been made to explain a fuzzy commitment scheme. In the conventional Commitment schemes, both committed string m and valid opening key are required to enable the sender to prove the commitment. However there could be many instances where the transmission involves noise or minor errors arising purely because of the factors over which neither the sender nor the receiver have any control. The fuzzy commitment scheme presented in this paper is to accept the opening key that is close to the original one in suitable distance metric, but not necessarily identical. The concept itself is illustrated with the help of simple situation.

  18. Magnetic axis alignment and the Poisson alignment reference system

    Science.gov (United States)

    Griffith, Lee V.; Schenz, Richard F.; Sommargren, Gary E.

    1989-01-01

    Three distinct metrological operations are necessary to align a free-electron laser (FEL): the magnetic axis must be located, a straight line reference (SLR) must be generated, and the magnetic axis must be related to the SLR. This paper begins with a review of the motivation for developing an alignment system that will assure better than 100 micrometer accuracy in the alignment of the magnetic axis throughout an FEL. The paper describes techniques for identifying the magnetic axis of solenoids, quadrupoles, and wiggler poles. Propagation of a laser beam is described to the extent of revealing sources of nonlinearity in the beam. Development and use of the Poisson line, a diffraction effect, is described in detail. Spheres in a large-diameter laser beam create Poisson lines and thus provide a necessary mechanism for gauging between the magnetic axis and the SLR. Procedures for installing FEL components and calibrating alignment fiducials to the magnetic axes of the components are also described. An error budget shows that the Poisson alignment reference system will make it possible to meet the alignment tolerances for an FEL.

  19. First steps towards a generic sample preparation scheme for inorganic engineered nanoparticles in a complex matrix for detection, characterization, and quantification by asymmetric flow-field flow fractionation coupled to multi-angle light scattering and ICP-MS

    DEFF Research Database (Denmark)

    Wagner, Stephan; Legros, Samuel; Löschner, Katrin

    2015-01-01

    The applicability of a multi-step generic procedure to systematically develop sample preparation methods for the detection, characterization, and quantification of inorganic engineered nanoparticles (ENPs) in a complex matrix was successfully demonstrated. The research focused on the optimization...... content by asymmetric flow-field flow fractionation coupled to a multi-angle light scattering detector and an inductively coupled plasma mass spectrometer. Following the proposed generic procedure SiO2-ENPs were separated from a tomato soup. Two potential sample preparation methods were tested these being...

  20. Institutional analysis of incentive schemes for ecosystem service provision - a comparative study across four European countries

    DEFF Research Database (Denmark)

    Prokofieva, Irina; Górriz, Elena; Boon, Tove Enggrob;

    2014-01-01

    Incentive schemes and payments for ecosystem services attract increasing attention as a means for aligning the interests of landowners and society by remunerating forest owners for the goods and services their forests produce. As incentive schemes expand around the world, questions related...... and Italy. The analysed schemes are predominantly aimed at enhancing biodiversity and improving recreation. One of the schemes is also related to preserving a variety of forest ecosystem services from forest fires. The incentive schemes are studied following a framework for the institutional analysis of PES...

  1. Codebook-based interference alignment for uplink MIMO interference channels

    KAUST Repository

    Lee, Hyun Ho

    2014-02-01

    In this paper, we propose a codebook-based interference alignment (IA) scheme in the constant multiple-input multipleoutput (MIMO) interference channel especially for the uplink scenario. In our proposed scheme, we assume cooperation among base stations (BSs) through reliable backhaul links so that global channel knowledge is available for all BSs, which enables BS to compute the transmit precoder and inform its quantized index to the associated user via limited rate feedback link.We present an upper bound on the rate loss of the proposed scheme and derive the scaling law of the feedback load tomaintain a constant rate loss relative to IA with perfect channel knowledge. Considering the impact of overhead due to training, cooperation, and feedback, we address the effective degrees of freedom (DOF) of the proposed scheme and derive the maximization of the effective DOF. From simulation results, we verify our analysis on the scaling law to preserve the multiplexing gain and confirm that the proposed scheme is more effective than the conventional IA scheme in terms of the effective DOF. © 2014 KICS.

  2. CSR schemes in agribusiness

    DEFF Research Database (Denmark)

    Pötz, Katharina Anna; Haas, Rainer; Balzarova, Michaela

    2013-01-01

    Purpose – The rise of CSR followed a demand for CSR standards and guidelines. In a sector already characterized by a large number of standards, the authors seek to ask what CSR schemes apply to agribusiness, and how they can be systematically compared and analysed. Design....../methodology/approach – Following a deductive-inductive approach the authors develop a model to compare and analyse CSR schemes based on existing studies and on coding qualitative data on 216 CSR schemes. Findings – The authors confirm that CSR standards and guidelines have entered agribusiness and identify a complex landscape...... of schemes that can be categorized on focus areas, scales, mechanisms, origins, types and commitment levels. Research limitations/implications – The findings contribute to conceptual and empirical research on existing models to compare and analyse CSR standards. Sampling technique and depth of analysis limit...

  3. Tabled Execution in Scheme

    Energy Technology Data Exchange (ETDEWEB)

    Willcock, J J; Lumsdaine, A; Quinlan, D J

    2008-08-19

    Tabled execution is a generalization of memorization developed by the logic programming community. It not only saves results from tabled predicates, but also stores the set of currently active calls to them; tabled execution can thus provide meaningful semantics for programs that seemingly contain infinite recursions with the same arguments. In logic programming, tabled execution is used for many purposes, both for improving the efficiency of programs, and making tasks simpler and more direct to express than with normal logic programs. However, tabled execution is only infrequently applied in mainstream functional languages such as Scheme. We demonstrate an elegant implementation of tabled execution in Scheme, using a mix of continuation-passing style and mutable data. We also show the use of tabled execution in Scheme for a problem in formal language and automata theory, demonstrating that tabled execution can be a valuable tool for Scheme users.

  4. Numerical stability of iterative scheme in solving coupled vibration of a train-bridge system%车桥耦合振动迭代求解稳定性研究

    Institute of Scientific and Technical Information of China (English)

    杜宪亭; 夏禾; 张田

    2012-01-01

    Bridge and vehicle subsystems were simplified into oscillators connected with springs or a system of masses with springs in vertical direction, respectively. The numerical stabilities of iterative schemes in solving dynamic interaction of train and bridge were studied with different wheel-rail relations on the basis of the spectral radius theory. The corresponding improvement approach was proposed in term of possible causes leading to numerical divergence. The results showed that the iteration can converge if the time step is small enough for the wheel-rail separation model; for the wheel-rail non-separation model, direct iterative scheme may lead to numerical instability if the mass of a bridge node is smaller than that of the passing wheel-pair; the virtual mass approach is proposed, it can not only avoid potential divergence but also retain the advantages of direct iterative scheme.%将桥梁、车辆分别简化为竖向振动的弹簧振子、簧上质量系,应用谱半径理论研究不同轮轨关系、不同迭代格式下车桥动力相互作用的数值求解稳定性问题,针对可能引起迭代计算发散的原因,提出改进措施.研究表明,采用轮轨分离模型,时间积分步足够小,迭代过程即可收敛;轮轨密贴分析模型中,轮对质量大于所通过桥梁节点质量时采用直接迭代格式会造成数值计算发散;轮轨密贴模型迭代求解过程中应用该虚拟质量法既可避免迭代数值发散亦可保留直接迭代优点.

  5. Functionally informed cortex based alignment: an integrated approach for whole-cortex macro-anatomical and ROI-based functional alignment.

    Science.gov (United States)

    Frost, Martin A; Goebel, Rainer

    2013-12-01

    Due to anatomical variability across subjects many brain mapping experiments have analysis focused on a few particular regions of interest so as to circumvent the problem of sub-optimal statistics resulting from the lack of anatomical correspondence across subjects. Since the topographic distribution of experimental effects across the cortex is also often of interest, two separate analyses are often conducted, one on the regions of interest alone, as well as a separate 'whole brain' analysis with sub-optimal spatial correspondence across brains. In this paper we present a new group alignment procedure which incorporates, from each subject, both macro-anatomical (curvature) information and functional information from standard localizer experiments. After specifying appropriate parameters to weight anatomical and functional alignment forces, we were able to create a group cortical reconstruction which was well aligned in terms of both anatomical and functional areas. We observed an increase in the overlap of functional areas as well as an improvement in group statistics following this integrated alignment procedure. We propose that, using this alignment scheme, two separate analyses may not be necessary as both analyses can be integrated into a single procedure. After an integrated structural and functional alignment one is able to carry out a whole brain analysis with improved statistical sensitivity due to the reduction in spatial variation in the location of functional regions of interest which fCBA accomplishes. Furthermore, regions in the vicinity of localised and aligned regions-of-interest will also benefit from the integrated alignment.

  6. XTR-Kurosawa-Desmedt Scheme

    Institute of Scientific and Technical Information of China (English)

    DING XIU-HUAN; FU ZHI-GUO; ZHANG SHU-GONG

    2009-01-01

    This paper proposes an XTR version of the Kurosawa-Desmedt scheme. Our scheme is secure against adaptive choeen-ciphertext attack under the XTR version of the Decisional Diffie-Hellman assumption in the standard model. Comparing efficiency between the Kurosawa-Desmedt scheme and the proposed XTR-Kurosawa-Desmedt scheme, we find that the proposed scheme is more efficient than the Kurosawa-Desmedt scheme both in communication and computation without compromising security.

  7. Sensing Characteristics of A Precision Aligner Using Moire Gratings for Precision Alignment System

    Institute of Scientific and Technical Information of China (English)

    ZHOU Lizhong; Hideo Furuhashi; Yoshiyuki Uchida

    2001-01-01

    Sensing characteristics of a precision aligner using moire gratings for precision alignment sysem has been investigated. A differential moire alignment system and a modified alignment system were used. The influence of the setting accuracy of the gap length and inclination of gratings on the alignment accuracy has been studied experimentally and theoretically. Setting accuracy of the gap length less than 2.5μm is required in modified moire alignment. There is no influence of the gap length on the alignment accuracy in the differential alignment system. The inclination affects alignment accuracies in both differential and modified moire alignment systems.

  8. An Automated SVD for Alignment and Control of James Webb Space Telescope Mirrors

    Science.gov (United States)

    Shiri, Sharam; Howard, Joseph M.; Aronstein, David L.; Ha, Kong; Smith, J. Scott; Dean, Bruce

    2008-01-01

    The James Webb Space Telescope (JWST) is a three-mirror anastigmatic telescope. The alignment of the segmented primary and secondary mirrors in the wavefront sensing and control process involves a series of actuators to control the six degrees-of-freedom motion on each surface in addition to the radius of curvature. The control matrix developed from the alignment parameters is over-determined and singular value decomposition (SVD) method is used to solve it in the least square sense. An automated SVD scheme has been developed to identify the most contributing modes in a typical alignment process and reduce the impact of error-prone modes from the control process.

  9. Succesful labelling schemes

    DEFF Research Database (Denmark)

    Juhl, Hans Jørn; Stacey, Julia

    2001-01-01

    It is usual practice to evaluate the success of a labelling scheme by looking at the awareness percentage, but in many cases this is not sufficient. The awareness percentage gives no indication of which of the consumer segments that are aware of and use labelling schemes and which do not. In the ......It is usual practice to evaluate the success of a labelling scheme by looking at the awareness percentage, but in many cases this is not sufficient. The awareness percentage gives no indication of which of the consumer segments that are aware of and use labelling schemes and which do not....... In the spring of 2001 MAPP carried out an extensive consumer study with special emphasis on the Nordic environmentally friendly label 'the swan'. The purpose was to find out how much consumers actually know and use various labelling schemes. 869 households were contacted and asked to fill in a questionnaire...... it into consideration when I go shopping. The respondent was asked to pick the most suitable answer, which described her use of each label. 29% - also called 'the labelling blind' - responded that they basically only knew the recycling label and the Government controlled organic label 'Ø-mærket'. Another segment of 6...

  10. Charge preserving high order PIC schemes

    Energy Technology Data Exchange (ETDEWEB)

    Londrillo, P., E-mail: pasquale.londrillo@oabo.inaf.i [INAF Bologna Osservatorio Astronomico (Italy); INFN Sezione Bologna (Italy); Benedetti, C.; Sgattoni, A.; Turchetti, G. [INFN Sezione Bologna (Italy); Dipartimento di Fisica dell' Universita di Bologna (Italy)

    2010-08-01

    In this paper we present some new results on our investigation aimed at extending to higher order (HOPIC) the classical PIC framework. After reviewing the basic resolution properties of the Runge-Kutta time integrator, coupled to fourth (sixth) order compact schemes for space derivatives in the Maxwell equations, we focus on the problem of extending charge conservation schemes to a general HOPIC framework. This issue represents the main contribution of the present work. We consider then a few numerical examples of 1D laser-plasma interaction in the under-dense and over-dense regimes relevant for ions acceleration, to test grid convergence and to compare HOPIC results with standard PIC schemes (LOPIC).

  11. DIDA: Distributed Indexing Dispatched Alignment.

    Directory of Open Access Journals (Sweden)

    Hamid Mohamadi

    Full Text Available One essential application in bioinformatics that is affected by the high-throughput sequencing data deluge is the sequence alignment problem, where nucleotide or amino acid sequences are queried against targets to find regions of close similarity. When queries are too many and/or targets are too large, the alignment process becomes computationally challenging. This is usually addressed by preprocessing techniques, where the queries and/or targets are indexed for easy access while searching for matches. When the target is static, such as in an established reference genome, the cost of indexing is amortized by reusing the generated index. However, when the targets are non-static, such as contigs in the intermediate steps of a de novo assembly process, a new index must be computed for each run. To address such scalability problems, we present DIDA, a novel framework that distributes the indexing and alignment tasks into smaller subtasks over a cluster of compute nodes. It provides a workflow beyond the common practice of embarrassingly parallel implementations. DIDA is a cost-effective, scalable and modular framework for the sequence alignment problem in terms of memory usage and runtime. It can be employed in large-scale alignments to draft genomes and intermediate stages of de novo assembly runs. The DIDA source code, sample files and user manual are available through http://www.bcgsc.ca/platform/bioinfo/software/dida. The software is released under the British Columbia Cancer Agency License (BCCA, and is free for academic use.

  12. Plasmonic Antenna Coupling for QWIPs

    Science.gov (United States)

    Hong, John

    2007-01-01

    In a proposed scheme for coupling light into a quantum-well infrared photodetector (QWIP), an antenna or an array of antennas made of a suitable metal would be fabricated on the face of what would otherwise be a standard QWIP. This or any such coupling scheme is required to effect polarization conversion: Light incident perpendicularly to the face is necessarily polarized in the plane of the face, whereas, as a matter of fundamental electrodynamics and related quantum selection rules, light must have a non-zero component of perpendicular polarization in order to be absorbed in the photodetection process. In a prior coupling scheme, gratings in the form of surface corrugations diffract normally gles, thereby imparting some perpendicular polarization. Unfortunately, the corrugation- fabrication process increases the overall nonuniformity of a large QWIP array. The proposed scheme is an alternative to the use of surface corrugations.

  13. Volume visualization of multiple alignment of genomic DNA

    Energy Technology Data Exchange (ETDEWEB)

    Shah, Nameeta; Weber, Gunther H.; Dillard, Scott E.; Hamann, Bernd

    2004-05-01

    Genomes of hundreds of species have been sequenced to date and many more are being sequenced. As more and more sequence data sets become available, and as the challenge of comparing these massive ''billion basepair DNA sequences'' becomes substantial, so does the need for more powerful tools supporting the exploration of these data sets. Similarity score data used to compare aligned DNA sequences is inherently one-dimensional. One-dimensional (1D) representations of these data sets do not effectively utilize screen real estate. We present a technique to arrange 1D data in 3D space to allow us to apply state-of-the-art interactive volume visualization techniques for data exploration. We provide results for aligned DNA sequence data and compare it with traditional 1D line plots. Our technique, coupled with 1D line plots, results in effective multiresolution visualization of very large aligned sequence data sets.

  14. Compact Spreader Schemes

    Energy Technology Data Exchange (ETDEWEB)

    Placidi, M.; Jung, J. -Y.; Ratti, A.; Sun, C.

    2014-07-25

    This paper describes beam distribution schemes adopting a novel implementation based on low amplitude vertical deflections combined with horizontal ones generated by Lambertson-type septum magnets. This scheme offers substantial compactness in the longitudinal layouts of the beam lines and increased flexibility for beam delivery of multiple beam lines on a shot-to-shot basis. Fast kickers (FK) or transverse electric field RF Deflectors (RFD) provide the low amplitude deflections. Initially proposed at the Stanford Linear Accelerator Center (SLAC) as tools for beam diagnostics and more recently adopted for multiline beam pattern schemes, RFDs offer repetition capabilities and a likely better amplitude reproducibility when compared to FKs, which, in turn, offer more modest financial involvements both in construction and operation. Both solutions represent an ideal approach for the design of compact beam distribution systems resulting in space and cost savings while preserving flexibility and beam quality.

  15. General Alignment Concept of the CMS experiment

    CERN Document Server

    Lampen, T

    2006-01-01

    Efficient and accurate track reconstruction requires proper alignment of the tracking devices used. Here we describe the general alignment strategy envisaged for the CMS experiment. The hardware alignment devices of CMS are presented as well as the different track based alignment approaches.

  16. Photosensitive Polymers for Liquid Crystal Alignment

    Science.gov (United States)

    Mahilny, U. V.; Stankevich, A. I.; Trofimova, A. V.; Muravsky, A. A.; Murauski, A. A.

    The peculiarities of alignment of liquid crystal (LC) materials by the layers of photocrosslinkable polymers with side benzaldehyde groups are considered. The investigation of mechanism of photostimulated alignment by rubbed benzaldehyde layer is performed. The methods of creation of multidomain aligning layers on the basis of photostimulated rubbing alignment are described.

  17. Coupling between the JULES land-surface scheme and the CCATT-BRAMS atmospheric chemistry model (JULES-CCATT-BRAMS1.0): applications to numerical weather forecasting and the CO2 budget in South America

    Science.gov (United States)

    Moreira, D. S.; Freitas, S. R.; Bonatti, J. P.; Mercado, L. M.; Rosário, N. M. É.; Longo, K. M.; Miller, J. B.; Gloor, M.; Gatti, L. V.

    2013-01-01

    This article presents the development of a new numerical system denominated JULES-CCATT-BRAMS, which resulted from the coupling of the JULES surface model to the CCATT-BRAMS atmospheric chemistry model. The performance of this system in relation to several meteorological variables (wind speed at 10 m, air temperature at 2 m, dew point temperature at 2 m, pressure reduced to mean sea level and 6 h accumulated precipitation) and the CO2 concentration above an extensive area of South America is also presented, focusing on the Amazon basin. The evaluations were conducted for two periods, the wet (March) and dry (September) seasons of 2010. The statistics used to perform the evaluation included bias (BIAS) and root mean squared error (RMSE). The errors were calculated in relation to observations at conventional stations in airports and automatic stations. In addition, CO2 concentrations in the first model level were compared with meteorological tower measurements and vertical CO2 profiles were compared with aircraft data. The results of this study show that the JULES model coupled to CCATT-BRAMS provided a significant gain in performance in the evaluated atmospheric fields relative to those simulated by the LEAF (version 3) surface model originally utilized by CCATT-BRAMS. Simulations of CO2 concentrations in Amazonia and a comparison with observations are also discussed and show that the system presents a gain in performance relative to previous studies. Finally, we discuss a wide range of numerical studies integrating coupled atmospheric, land surface and chemistry processes that could be produced with the system described here. Therefore, this work presents to the scientific community a free tool, with good performance in relation to the observed data and re-analyses, able to produce atmospheric simulations/forecasts at different resolutions, for any period of time and in any region of the globe.

  18. Coupling between the JULES land-surface scheme and the CCATT-BRAMS atmospheric chemistry model (JULES-CCATT-BRAMS1.0: applications to numerical weather forecasting and the CO2 budget in South America

    Directory of Open Access Journals (Sweden)

    D. S. Moreira

    2013-01-01

    Full Text Available This article presents the development of a new numerical system denominated JULES-CCATT-BRAMS, which resulted from the coupling of the JULES surface model to the CCATT-BRAMS atmospheric chemistry model. The performance of this system in relation to several meteorological variables (wind speed at 10 m, air temperature at 2 m, dew point temperature at 2 m, pressure reduced to mean sea level and 6 h accumulated precipitation and the CO2 concentration above an extensive area of South America is also presented, focusing on the Amazon basin. The evaluations were conducted for two periods, the wet (March and dry (September seasons of 2010. The statistics used to perform the evaluation included bias (BIAS and root mean squared error (RMSE. The errors were calculated in relation to observations at conventional stations in airports and automatic stations. In addition, CO2 concentrations in the first model level were compared with meteorological tower measurements and vertical CO2 profiles were compared with aircraft data. The results of this study show that the JULES model coupled to CCATT-BRAMS provided a significant gain in performance in the evaluated atmospheric fields relative to those simulated by the LEAF (version 3 surface model originally utilized by CCATT-BRAMS. Simulations of CO2 concentrations in Amazonia and a comparison with observations are also discussed and show that the system presents a gain in performance relative to previous studies. Finally, we discuss a wide range of numerical studies integrating coupled atmospheric, land surface and chemistry processes that could be produced with the system described here. Therefore, this work presents to the scientific community a free tool, with good performance in relation to the observed data and re-analyses, able to produce atmospheric simulations/forecasts at different resolutions, for any period of time and in any region of the globe.

  19. Labeling Schemes with Queries

    OpenAIRE

    2006-01-01

    We study the question of ``how robust are the known lower bounds of labeling schemes when one increases the number of consulted labels''. Let $f$ be a function on pairs of vertices. An $f$-labeling scheme for a family of graphs $\\cF$ labels the vertices of all graphs in $\\cF$ such that for every graph $G\\in\\cF$ and every two vertices $u,v\\in G$, the value $f(u,v)$ can be inferred by merely inspecting the labels of $u$ and $v$. This paper introduces a natural generalization: the notion of $f$-...

  20. Alignment method for parabolic trough solar concentrators

    Science.gov (United States)

    Diver, Richard B.

    2010-02-23

    A Theoretical Overlay Photographic (TOP) alignment method uses the overlay of a theoretical projected image of a perfectly aligned concentrator on a photographic image of the concentrator to align the mirror facets of a parabolic trough solar concentrator. The alignment method is practical and straightforward, and inherently aligns the mirror facets to the receiver. When integrated with clinometer measurements for which gravity and mechanical drag effects have been accounted for and which are made in a manner and location consistent with the alignment method, all of the mirrors on a common drive can be aligned and optimized for any concentrator orientation.

  1. Automatic Alignment Fiber Optic Coupling System for Optimal Signal Transmission

    Science.gov (United States)

    2014-03-01

    Devices Packaging,” Proc. of the 2005 IEEE International Conference on Mechatronics , July 10-12, Taiwan, 2005. [3] C.L. Chang, C.Y. Tseng, and J.P...Conference on Mechatronics and Automation, June 25-28, China, 2006. 5f. WORK UNIT NUMBER REPORT DOCUMENTATION PAGE Form Approved OMB No. 0704-01-0188

  2. Adaptive Processing for Sequence Alignment

    KAUST Repository

    Zidan, Mohammed Affan

    2012-01-26

    Disclosed are various embodiments for adaptive processing for sequence alignment. In one embodiment, among others, a method includes obtaining a query sequence and a plurality of database sequences. A first portion of the plurality of database sequences is distributed to a central processing unit (CPU) and a second portion of the plurality of database sequences is distributed to a graphical processing unit (GPU) based upon a predetermined splitting ratio associated with the plurality of database sequences, where the database sequences of the first portion are shorter than the database sequences of the second portion. A first alignment score for the query sequence is determined with the CPU based upon the first portion of the plurality of database sequences and a second alignment score for the query sequence is determined with the GPU based upon the second portion of the plurality of database sequences.

  3. Laser shaft alignment measurement model

    Science.gov (United States)

    Mo, Chang-tao; Chen, Changzheng; Hou, Xiang-lin; Zhang, Guoyu

    2007-12-01

    Laser beam's track which is on photosensitive surface of the a receiver will be closed curve, when driving shaft and the driven shaft rotate with same angular velocity and rotation direction. The coordinate of arbitrary point which is on the curve is decided by the relative position of two shafts. Basing on the viewpoint, a mathematic model of laser alignment is set up. By using a data acquisition system and a data processing model of laser alignment meter with single laser beam and a detector, and basing on the installation parameter of computer, the state parameter between two shafts can be obtained by more complicated calculation and correction. The correcting data of the four under chassis of the adjusted apparatus moving on the level and the vertical plane can be calculated. This will instruct us to move the apparatus to align the shafts.

  4. The alignment-distribution graph

    Science.gov (United States)

    Chatterjee, Siddhartha; Gilbert, John R.; Schreiber, Robert

    1993-01-01

    Implementing a data-parallel language such as Fortran 90 on a distributed-memory parallel computer requires distributing aggregate data objects (such as arrays) among the memory modules attached to the processors. The mapping of objects to the machine determines the amount of residual communication needed to bring operands of parallel operations into alignment with each other. We present a program representation called the alignment distribution graph that makes these communication requirements explicit. We describe the details of the representation, show how to model communication cost in this framework, and outline several algorithms for determining object mappings that approximately minimize residual communication.

  5. XUV ionization of aligned molecules

    Energy Technology Data Exchange (ETDEWEB)

    Kelkensberg, F.; Siu, W.; Gademann, G. [FOM Institute AMOLF, Science Park 104, NL-1098 XG Amsterdam (Netherlands); Rouzee, A.; Vrakking, M. J. J. [FOM Institute AMOLF, Science Park 104, NL-1098 XG Amsterdam (Netherlands); Max-Born-Institut, Max-Born Strasse 2A, D-12489 Berlin (Germany); Johnsson, P. [FOM Institute AMOLF, Science Park 104, NL-1098 XG Amsterdam (Netherlands); Department of Physics, Lund University, Post Office Box 118, SE-221 00 Lund (Sweden); Lucchini, M. [Department of Physics, Politecnico di Milano, Istituto di Fotonica e Nanotecnologie CNR-IFN, Piazza Leonardo da Vinci 32, 20133 Milano (Italy); Lucchese, R. R. [Department of Chemistry, Texas A and M University, College Station, Texas 77843-3255 (United States)

    2011-11-15

    New extreme-ultraviolet (XUV) light sources such as high-order-harmonic generation (HHG) and free-electron lasers (FELs), combined with laser-induced alignment techniques, enable novel methods for making molecular movies based on measuring molecular frame photoelectron angular distributions. Experiments are presented where CO{sub 2} molecules were impulsively aligned using a near-infrared laser and ionized using femtosecond XUV pulses obtained by HHG. Measured electron angular distributions reveal contributions from four orbitals and the onset of the influence of the molecular structure.

  6. Partial Interference Alignment for K-user MIMO Interference Channels

    CERN Document Server

    Huang, Huang

    2011-01-01

    In this paper, we consider a Partial Interference Alignment and Interference Detection (PIAID) design for $K$-user quasi-static MIMO interference channels with discrete constellation inputs. Each transmitter has M antennas and transmits L independent data streams to the desired receiver with N receive antennas. We focus on the case where not all K-1 interfering transmitters can be aligned at every receiver. As a result, there will be residual interference at each receiver that cannot be aligned. Each receiver detects and cancels the residual interference based on the constellation map. However, there is a window of unfavorable interference profile at the receiver for Interference Detection (ID). In this paper, we propose a low complexity Partial Interference Alignment scheme in which we dynamically select the user set for IA so as to create a favorable interference profile for ID at each receiver. We first derive the average symbol error rate (SER) by taking into account of the non-Guassian residual interfere...

  7. A divide and conquer approach to multiple alignment.

    Science.gov (United States)

    Dress, A; Füllen, G; Perrey, S

    1995-01-01

    We present a report on work in progress on a divide and conquer approach to multiple alignment. The algorithm makes use of the costs calculated from applying the standard dynamic programming scheme to all pairs of sequences. The resulting cost matrices for pairwise alignment give rise to secondary matrices containing the additional costs imposed by fixing the path through the dynamic programming graph at a particular vertex. Such a constraint corresponds to a division of the problem obtained by slicing both sequences between two particular positions, and aligning the two sequences on the left and the two sequences on the right, charging for gaps introduced at the slicing point. To obtain an estimate for the additional cost imposed by forcing the multiple alignment through a particular vertex in the whole hypercube, we will take a (weighted) sum of secondary costs over all pairwise projections of the division of the problem, as defined by this vertex, that is, by slicing all sequences at the points suggested by the vertex. We then use that partition of every single sequence under consideration into two 'halfs' which imposes a minimal (weighted) sum of pairwise additional costs, making sure that one of the sequences is divided somewhere close to its midpoint. Hence, each iteration can cut the problem size in half. As the enumeration of all possible partitions may restrict this approach to small-size problems, we eliminate futile partitions, and organize their enumeration in a way that starts with the most promising ones.(ABSTRACT TRUNCATED AT 250 WORDS)

  8. Alternative health insurance schemes

    DEFF Research Database (Denmark)

    Keiding, Hans; Hansen, Bodil O.

    2002-01-01

    In this paper, we present a simple model of health insurance with asymmetric information, where we compare two alternative ways of organizing the insurance market. Either as a competitive insurance market, where some risks remain uninsured, or as a compulsory scheme, where however, the level...... competitive insurance; this situation turns out to be at least as good as either of the alternatives...

  9. NUMERICAL SIMULATIONS OF SEA ICE WITH DIFFERENT ADVECTION SCHEMES

    Institute of Scientific and Technical Information of China (English)

    LIU Xi-ying

    2011-01-01

    Numerical simulations are carried out for sea ice with four different advection schemes to study their effects on the simulation results.The sea ice model employed here is the Sea Ice Simulator (SIS) of the Geophysical Fluid Dynamics Laboratory (GFDL) Modular Ocean Model version 4b (MOM4b) and the four advection schemes are, the upwind scheme originally used in the SIS, the Multi-Dimensional Positive Advection (MDPA) scheme, the Incremental Remapping Scheme (IRS) and the Two Step Shape Preserving (TSSP) scheme.The latter three schemes are newly introduced.To consider the interactions between sea ice and ocean, a mixed layer ocean model is introduced and coupled to the SIS.The coupled model uses a tri-polar coordinate with 120×65 grids,covering the whole earth globe, in the horizontal plane.Simulation results in the northern high latitudes are analyzed.In all simulations, the model reproduces the seasonal variation of sea ice in the northern high latitudes well.Compared with the results from the observation, the sea ice model produces some extra sea ice coverage in the Greenland Sea and Barents Sea in winter due to the exclusion of ocean current effects and the smaller simulated sea ice thickness in the Arctic basin.There are similar features among the results obtained with the introduced three advection schemes.The simulated sea ice thickness with the three newly introduced schemes are all smaller than that of the upwind scheme and the simulated sea ice velocities of movement are all smaller than that of the upwind scheme.There are more similarities shared in the results obtained with the MPDA and TSSP schemes.

  10. Spin–orbit coupling in actinide cations

    DEFF Research Database (Denmark)

    Bagus, Paul S.; Ilton, Eugene S.; Martin, Richard L.

    2012-01-01

    The limiting case of Russell–Saunders coupling, which leads to a maximum spin alignment for the open shell electrons, usually explains the properties of high spin ionic crystals with transition metals. For actinide compounds, the spin–orbit splitting is large enough to cause a significantly reduced...... spin alignment. Novel concepts are used to explain the dependence of the spin alignment on the 5f shell occupation. We present evidence that the XPS of ionic actinide materials may provide direct information about the angular momentum coupling within the 5f shell....

  11. Alignment and resolution studies of a MARS scanner

    CERN Document Server

    Butler, A P; Bell, S T; Chelkov, G; Demichev, M; Gongadze, A; Kotov, S; Kozhevnikov, D; Kruchonak, U; Potrap, I; Smolyanskiy, P; Zhemchugov, A

    2015-01-01

    The MARS scanner is designed for the x-ray spectroscopic study of samples with the aid of computer tomography methods. Computer tomography allows the reconstruction of slices of an investigated sample using a set of shadow projections obtained for different angles. Projections in the MARS scanner are produced using a cone x-ray beam geometry. Correct reconstruction in this scheme requires precise knowledge of several geometrical parameters of a tomograph, such as displacement of a rotation axis, x-ray source position with respect to a camera, and camera inclinations. Use of inaccurate parameters leads to a poor sample reconstruction. Non-ideal positioning of camera, x-ray source and cylindrical rotating frame (gantry) itself on which these parts are located, leads to the need for tomograph alignment. In this note we describe the alignment procedure that was used to get different geometrical corrections for the reconstruction. Also, several different estimations of the final spatial resolution for reconstructe...

  12. Tidally Induced Elongation and Alignments of Galaxy Clusters

    CERN Document Server

    Salvador-Solé, E; Salvador-Sole, Eduard; Solanes, Jose M.

    1993-01-01

    We show that tidal interaction among galaxy clusters can account for their observed alignments and very marked elongation and, consequently, that these characteristics of clusters are actually consistent with them being formed in hierarchical clustering. The well-established distribution of projected axial ratios of clusters with richness class $R\\ge 0$ is recovered very satisfactorily by means of a simple model with no free parameters. The main perturbers are relatively rich ($R\\ge 1$) single clusters and/or groups of clusters (superclusters) of a wider richness class ($R\\ge 0$) located within a distance of about 65 $h^{-1}$ Mpc from the perturbed cluster. This makes the proposed scheme be also consistent with all reported alignment effects involving clusters. We find that this tidal interaction is typically in the saturate regime (\\ie the maximum elongation allowed for systems in equilibrium is reached), which explains the very similar intrinsic axial ratio shown by all clusters. Tides would therefore play ...

  13. Coupling between the JULES land-surface scheme and the CCATT-BRAMS atmospheric chemistry model (JULES-CCATT-BRAMS1.0: applications to numerical weather forecasting and the CO2 budget in South America

    Directory of Open Access Journals (Sweden)

    D. S. Moreira

    2013-08-01

    Full Text Available This article presents the coupling of the JULES surface model to the CCATT-BRAMS atmospheric chemistry model. This new numerical system is denominated JULES-CCATT-BRAMS. We demonstrate the performance of this new model system in relation to several meteorological variables and the CO2 mixing ratio over a large part of South America, focusing on the Amazon basin. The evaluation was conducted for two time periods, the wet (March and dry (September seasons of 2010. The model errors were calculated in relation to meteorological observations at conventional stations in airports and automatic stations. In addition, CO2 mixing ratios in the first model level were compared with meteorological tower measurements and vertical CO2 profiles were compared with observations obtained with airborne instruments. The results of this study show that the JULES-CCATT-BRAMS modeling system provided a significant gain in performance for the considered atmospheric fields relative to those simulated by the LEAF (version 3 surface model originally employed by CCATT-BRAMS. In addition, the new system significantly increases the ability to simulate processes involving air–surface interactions, due to the ability of JULES to simulate photosynthesis, respiration and dynamic vegetation, among other processes. We also discuss a wide range of numerical studies involving coupled atmospheric, land surface and chemistry processes that could be done with the system introduced here. Thus, this work presents to the scientific community a free modeling tool, with good performance in comparison with observational data and reanalysis model data, at least for the region and time period discussed here. Therefore, in principle, this model is able to produce atmospheric hindcast/forecast simulations at different spatial resolutions for any time period and any region of the globe.

  14. A High Resolution Low Dissipation Hybrid Scheme for Compressible Flows

    Institute of Scientific and Technical Information of China (English)

    YU Jian; YAN Chao; JIANG Zhenhua

    2011-01-01

    In this paper,an efficient hybrid shock capturing scheme is proposed to obtain accurate results both in the smooth region and around discontinuities for compressible flows.The hybrid algorithm is based on a fifth-order weighted essentially non-oscillatory (WENO) scheme in the finite volume form to solve the smooth part of the flow field,which is coupled with a characteristic-based monotone upstream-centered scheme for conservation laws(MUSCL) to capture discontinuities.The hybrid scheme is intended to combine high resolution of MUSCL scheme and low dissipation of WENO scheme.The two ingredients in this hybrid scheme are switched with an indicator.Three typical indicators are chosen and compared.MUSCL and WENO are both shock capturing schemes making the choice of the indicator parameter less crucial.Several test cases are carried out to investigate hybrid scheme with different indicators in terms of accuracy and efficiency.Numerical results demonstrate that the hybrid scheme in the present work performs well in a broad range of problems.

  15. The Rigors of Aligning Performance

    Science.gov (United States)

    2015-06-01

    organization must consider and work closely with its many stakeholders so as to guarantee satisfaction ; this idea is especially important as there is no...define success. Methodology includes a literature review, employee and customer surveys and a Strength, Weaknesses, Opportunities, Threats...bearing in mind customer perceptions. Recommendations include employee training centered on goal alignment, which is vital to highlight the

  16. Aligning Assessments for COSMA Accreditation

    Science.gov (United States)

    Laird, Curt; Johnson, Dennis A.; Alderman, Heather

    2015-01-01

    Many higher education sport management programs are currently in the process of seeking accreditation from the Commission on Sport Management Accreditation (COSMA). This article provides a best-practice method for aligning student learning outcomes with a sport management program's mission and goals. Formative and summative assessment procedures…

  17. Aligned natural inflation with modulations

    Directory of Open Access Journals (Sweden)

    Kiwoon Choi

    2016-08-01

    Full Text Available The weak gravity conjecture applied for the aligned natural inflation indicates that generically there can be a modulation of the inflaton potential, with a period determined by sub-Planckian axion scale. We study the oscillations in the primordial power spectrum induced by such modulation, and discuss the resulting observational constraints on the model.

  18. A simple scheme to generate x-type four-charge entangled states in circuit QED

    Institute of Scientific and Technical Information of China (English)

    Gao Gui-Long; Song Fu-Quan; Huang Shou-Sheng; Wang Hui; Yuan Xian-Zhang; Wang Ming-Feng; Jiang Nian-Quan

    2012-01-01

    We propose a simple scheme to generate x-type four-charge entangled states by using SQUID-based charge qubits capacitively coupled to a transmission line resonator (TLR).The coupling between the superconducting qubit and the TLR can be effectively controlled by properly adjusting the control parameters of the charge qubit.The experimental feasibility of our scheme is also shown.

  19. A pattern matching approach for the estimation of alignment between any two given DNA sequences.

    Science.gov (United States)

    Basu, K; Sriraam, N; Richard, R J A

    2007-08-01

    For a given DNA sequence, it is well known that pair wise alignment schemes are used to determine the similarity with the DNA sequences available in the databanks. The efficiency of the alignment decides the type of amino acids and its corresponding proteins. In order to evaluate the given DNA sequence for its proteomic identity, a pattern matching approach is proposed in this paper. A block based semi-global alignment scheme is introduced to determine the similarity between the DNA sequences (known and given). The two DNA sequences are divided into blocks of equal length and alignment is performed which minimizes the computational complexity. The efficiency of the alignment scheme is evaluated using the parameter, percentage of similarity (POS). Four essential DNA version of the amino acids that emphasize the importance of proteomic functionalities are chosen as patterns and matching is performed with the known and given DNA sequences to determine the similarity between them. The ratio of amino acid counts between the two sequences is estimated and the results are compared with that of the POS value. It is found from the experimental results that higher the POS value and the pattern matching higher are the similarity between the two DNA sequences. The optimal block is also identified based on the POS value and amino acids count.

  20. Progressive multiple sequence alignments from triplets

    Directory of Open Access Journals (Sweden)

    Stadler Peter F

    2007-07-01

    Full Text Available Abstract Background The quality of progressive sequence alignments strongly depends on the accuracy of the individual pairwise alignment steps since gaps that are introduced at one step cannot be removed at later aggregation steps. Adjacent insertions and deletions necessarily appear in arbitrary order in pairwise alignments and hence form an unavoidable source of errors. Research Here we present a modified variant of progressive sequence alignments that addresses both issues. Instead of pairwise alignments we use exact dynamic programming to align sequence or profile triples. This avoids a large fractions of the ambiguities arising in pairwise alignments. In the subsequent aggregation steps we follow the logic of the Neighbor-Net algorithm, which constructs a phylogenetic network by step-wisely replacing triples by pairs instead of combining pairs to singletons. To this end the three-way alignments are subdivided into two partial alignments, at which stage all-gap columns are naturally removed. This alleviates the "once a gap, always a gap" problem of progressive alignment procedures. Conclusion The three-way Neighbor-Net based alignment program aln3nn is shown to compare favorably on both protein sequences and nucleic acids sequences to other progressive alignment tools. In the latter case one easily can include scoring terms that consider secondary structure features. Overall, the quality of resulting alignments in general exceeds that of clustalw or other multiple alignments tools even though our software does not included heuristics for context dependent (mismatch scores.

  1. Application of an Online-Coupled Regional Climate Model, WRF-CAM5, over East Asia for Examination of Ice Nucleation Schemes: Part I. Comprehensive Model Evaluation and Trend Analysis for 2006 and 2011

    Energy Technology Data Exchange (ETDEWEB)

    Chen, Ying; Zhang, Yang; Fan, Jiwen; Leung, Lai-Yung; Zhang, Qiang; He, Kebin

    2015-08-18

    Online-coupled climate and chemistry models are necessary to realistically represent the interactions between climate variables and chemical species and accurately simulate aerosol direct and indirect effects on cloud, precipitation, and radiation. In this Part I of a two-part paper, simulations from the Weather Research and Forecasting model coupled with the physics package of Community Atmosphere Model (WRF-CAM5) are conducted with the default heterogeneous ice nucleation parameterization over East Asia for two full years: 2006 and 2011. A comprehensive model evaluation is performed using satellite and surface observations. The model shows an overall acceptable performance for major meteorological variables at the surface and in the boundary layer, as well as column variables (e.g., precipitation, cloud fraction, precipitating water vapor, downward longwave and shortwave radiation). Moderate to large biases exist for cloud condensation nuclei over oceanic areas, cloud variables (e.g., cloud droplet number concentration, cloud liquid and ice water paths, cloud optical depth, longwave and shortwave cloud forcing). These biases indicate a need to improve the model treatments for cloud processes, especially cloud droplets and ice nucleation, as well as to reduce uncertainty in the satellite retrievals. The model simulates well the column abundances of chemical species except for column SO2 but relatively poor for surface concentrations of several species such as CO, NO2, SO2, PM2.5, and PM10. Several reasons could contribute to the underestimation of major chemical species in East Asia including underestimations of anthropogenic emissions and natural dust emissions, uncertainties in the spatial and vertical distributions of the anthropogenic emissions, as well as biases in meteorological, radiative, and cloud predictions. Despite moderate to large biases in the chemical predictions, the model performance is generally consistent with

  2. Application of an Online-Coupled Regional Climate Model, WRF-CAM5, over East Asia for Examination of Ice Nucleation Schemes: Part I. Comprehensive Model Evaluation and Trend Analysis for 2006 and 2011

    Directory of Open Access Journals (Sweden)

    Ying Chen

    2015-08-01

    Full Text Available Online-coupled climate and chemistry models are necessary to realistically represent the interactions between climate variables and chemical species and accurately simulate aerosol direct and indirect effects on cloud, precipitation, and radiation. In this Part I of a two-part paper, simulations from the Weather Research and Forecasting model coupled with the physics package of Community Atmosphere Model (WRF-CAM5 are conducted with the default heterogeneous ice nucleation parameterization over East Asia for two full years: 2006 and 2011. A comprehensive model evaluation is performed using satellite and surface observations. The model shows an overall acceptable performance for major meteorological variables at the surface and in the boundary layer, as well as column variables (e.g., precipitation, cloud fraction, precipitating water vapor, downward longwave and shortwave radiation. Moderate to large biases exist for cloud condensation nuclei over oceanic areas, cloud variables (e.g., cloud droplet number concentration, cloud liquid and ice water paths, cloud optical depth, longwave and shortwave cloud forcing. These biases indicate a need to improve the model treatments for cloud processes, especially cloud droplets and ice nucleation, as well as to reduce uncertainty in the satellite retrievals. The model simulates well the column abundances of chemical species except for column SO2 but relatively poor for surface concentrations of several species such as CO, NO2, SO2, PM2.5, and PM10. Several reasons could contribute to the underestimation of major chemical species in East Asia including underestimations of anthropogenic emissions and natural dust emissions, uncertainties in the spatial and vertical distributions of the anthropogenic emissions, as well as biases in meteorological, radiative, and cloud predictions. Despite moderate to large biases in the chemical predictions, the model performance is generally consistent with or even better

  3. Detailed source term estimation of the atmospheric release for the Fukushima Daiichi Nuclear Power Station accident by coupling simulations of an atmospheric dispersion model with an improved deposition scheme and oceanic dispersion model

    Science.gov (United States)

    Katata, G.; Chino, M.; Kobayashi, T.; Terada, H.; Ota, M.; Nagai, H.; Kajino, M.; Draxler, R.; Hort, M. C.; Malo, A.; Torii, T.; Sanada, Y.

    2015-01-01

    Temporal variations in the amount of radionuclides released into the atmosphere during the Fukushima Daiichi Nuclear Power Station (FNPS1) accident and their atmospheric and marine dispersion are essential to evaluate the environmental impacts and resultant radiological doses to the public. In this paper, we estimate the detailed atmospheric releases during the accident using a reverse estimation method which calculates the release rates of radionuclides by comparing measurements of air concentration of a radionuclide or its dose rate in the environment with the ones calculated by atmospheric and oceanic transport, dispersion and deposition models. The atmospheric and oceanic models used are WSPEEDI-II (Worldwide version of System for Prediction of Environmental Emergency Dose Information) and SEA-GEARN-FDM (Finite difference oceanic dispersion model), both developed by the authors. A sophisticated deposition scheme, which deals with dry and fog-water depositions, cloud condensation nuclei (CCN) activation, and subsequent wet scavenging due to mixed-phase cloud microphysics (in-cloud scavenging) for radioactive iodine gas (I2 and CH3I) and other particles (CsI, Cs, and Te), was incorporated into WSPEEDI-II to improve the surface deposition calculations. The results revealed that the major releases of radionuclides due to the FNPS1 accident occurred in the following periods during March 2011: the afternoon of 12 March due to the wet venting and hydrogen explosion at Unit 1, midnight of 14 March when the SRV (safety relief valve) was opened three times at Unit 2, the morning and night of 15 March, and the morning of 16 March. According to the simulation results, the highest radioactive contamination areas around FNPS1 were created from 15 to 16 March by complicated interactions among rainfall, plume movements, and the temporal variation of release rates. The simulation by WSPEEDI-II using the new source term reproduced the local and regional patterns of cumulative

  4. On Converting Secret Sharing Scheme to Visual Secret Sharing Scheme

    Directory of Open Access Journals (Sweden)

    Wang Daoshun

    2010-01-01

    Full Text Available Abstract Traditional Secret Sharing (SS schemes reconstruct secret exactly the same as the original one but involve complex computation. Visual Secret Sharing (VSS schemes decode the secret without computation, but each share is m times as big as the original and the quality of the reconstructed secret image is reduced. Probabilistic visual secret sharing (Prob.VSS schemes for a binary image use only one subpixel to share the secret image; however the probability of white pixels in a white area is higher than that in a black area in the reconstructed secret image. SS schemes, VSS schemes, and Prob. VSS schemes have various construction methods and advantages. This paper first presents an approach to convert (transform a -SS scheme to a -VSS scheme for greyscale images. The generation of the shadow images (shares is based on Boolean XOR operation. The secret image can be reconstructed directly by performing Boolean OR operation, as in most conventional VSS schemes. Its pixel expansion is significantly smaller than that of VSS schemes. The quality of the reconstructed images, measured by average contrast, is the same as VSS schemes. Then a novel matrix-concatenation approach is used to extend the greyscale -SS scheme to a more general case of greyscale -VSS scheme.

  5. An Integral Formalism for the Construction of Scheme Transformations in Quantum Field Theory

    CERN Document Server

    Choi, Gongjun

    2016-01-01

    We present an integral formalism for constructing scheme transformations in a quantum field theory. We apply this to generate several new useful scheme transformations. A comparative analysis is given of these scheme transformations in terms of their series expansion coefficients and their resultant effect on the interaction coupling, in particular at a zero of the beta function away from the origin in coupling-constant space.

  6. Test Port for Fiber-Optic-Coupled Laser Altimeter

    Science.gov (United States)

    Ramos Izquierdo, Luis; Scott, V. Stanley; Rinis, Haris; Cavanaugh, John

    2011-01-01

    A test port designed as part of a fiber optic coupled laser altimeter receiver optical system allows for the back-illumination of the optical system for alignment verification, as well as illumination of the detector(s) for testing the receiver electronics and signal-processing algorithms. Measuring the optical alignment of a laser altimeter instrument is difficult after the instrument is fully assembled. The addition of a test port in the receiver aft-optics allows for the back-illumination of the receiver system such that its focal setting and boresight alignment can be easily verified. For a multiple-detector receiver system, the addition of the aft-optics test port offers the added advantage of being able to simultaneously test all the detectors with different signals that simulate the expected operational conditions. On a laser altimeter instrument (see figure), the aft-optics couple the light from the receiver telescope to the receiver detector(s). Incorporating a beam splitter in the aft-optics design allows for the addition of a test port to back-illuminate the receiver telescope and/or detectors. The aft-optics layout resembles a T with the detector on one leg, the receiver telescope input port on the second leg, and the test port on the third leg. The use of a custom beam splitter with 99-percent reflection, 1-percent transmission, and a mirrored roof can send the test port light to the receiver telescope leg as well as the detector leg, without unduly sacrificing the signal from the receiver telescope to the detector. The ability to test the receiver system alignment, as well as multiple detectors with different signals without the need to disassemble the instrument or connect and reconnect components, is a great advantage to the aft-optics test port. Another benefit is that the receiver telescope aperture is fully back-illuminated by the test port so the receiver telescope focal setting vs. pressure and or temperature can be accurately measured (as

  7. Aligned Layers of Silver Nano-Fibers

    Directory of Open Access Journals (Sweden)

    Andrii B. Golovin

    2012-02-01

    Full Text Available We describe a new dichroic polarizers made by ordering silver nano-fibers to aligned layers. The aligned layers consist of nano-fibers and self-assembled molecular aggregates of lyotropic liquid crystals. Unidirectional alignment of the layers is achieved by means of mechanical shearing. Aligned layers of silver nano-fibers are partially transparent to a linearly polarized electromagnetic radiation. The unidirectional alignment and density of the silver nano-fibers determine degree of polarization of transmitted light. The aligned layers of silver nano-fibers might be used in optics, microwave applications, and organic electronics.

  8. Efficient Scheme for Chemical Flooding Simulation

    Directory of Open Access Journals (Sweden)

    Braconnier Benjamin

    2014-07-01

    Full Text Available In this paper, we investigate an efficient implicit scheme for the numerical simulation of chemical enhanced oil recovery technique for oil fields. For the sake of brevity, we only focus on flows with polymer to describe the physical and numerical models. In this framework, we consider a black oil model upgraded with the polymer modeling. We assume the polymer only transported in the water phase or adsorbed on the rock following a Langmuir isotherm. The polymer reduces the water phase mobility which can change drastically the behavior of water oil interfaces. Then, we propose a fractional step technique to resolve implicitly the system. The first step is devoted to the resolution of the black oil subsystem and the second to the polymer mass conservation. In such a way, jacobian matrices coming from the implicit formulation have a moderate size and preserve solvers efficiency. Nevertheless, the coupling between the black-oil subsystem and the polymer is not fully resolved. For efficiency and accuracy comparison, we propose an explicit scheme for the polymer for which large time step is prohibited due to its CFL (Courant-Friedrichs-Levy criterion and consequently approximates accurately the coupling. Numerical experiments with polymer are simulated : a core flood, a 5-spot reservoir with surfactant and ions and a 3D real case. Comparisons are performed between the polymer explicit and implicit scheme. They prove that our polymer implicit scheme is efficient, robust and resolves accurately the coupling physics. The development and the simulations have been performed with the software PumaFlow [PumaFlow (2013 Reference manual, release V600, Beicip Franlab].

  9. Interference Alignment with Partially Coordinated Transmit Precoding

    CERN Document Server

    Yousafzai, Aimal Khan

    2011-01-01

    In this paper, we introduce an efficient interference alignment (IA) algorithm exploiting partially coordinated transmit precoding to improve the number of concurrent interference-free transmissions, i.e., the multiplexing gain, in multicell downlink. The proposed coordination model is such that each base-station simultaneously transmits to two users and each user is served by two base-stations. First, we show in a K-user system operating at the information theoretic upper bound of degrees of freedom (DOF), the generic IA is proper when $K \\leq 3$, whereas the proposed partially coordinated IA is proper when $K \\leq 5$. Then, we derive a non-iterative, i.e., one shot, IA algorithm for the proposed scheme when $K \\leq 5$. We show that for a given latency, the backhaul data rate requirement of the proposed method grows linearly with K. Monte-Carlo simulation results show that the proposed one-shot algorithm offers higher system throughput than the iterative IA at practical SNR levels.

  10. Towards Symbolic Encryption Schemes

    DEFF Research Database (Denmark)

    Ahmed, Naveed; Jensen, Christian D.; Zenner, Erik

    2012-01-01

    Symbolic encryption, in the style of Dolev-Yao models, is ubiquitous in formal security models. In its common use, encryption on a whole message is specified as a single monolithic block. From a cryptographic perspective, however, this may require a resource-intensive cryptographic algorithm......-known Needham-Schroeder and Denning-Sacco protocols. To avoid such problems, we advocate the use of refined notions of symbolic encryption that have natural correspondence to standard cryptographic encryption schemes....

  11. Design of an Fiber-Coupled Laser Heterodyne Interferometer for the FLARE

    Science.gov (United States)

    Frank, Samuel; Yoo, Jongsoo; Ji, Hantao; Jara-Almonte, Jon

    2016-10-01

    The FLARE (Facility for Laboratory Reconnection Experiments), which is currently under construction at PPPL, requires a complete set of laboratory plasma diagnostics. The Langmuir probes that will be used in the device to gather local density data require a reliable interferometer system to serve as baseline for density measurement calibration. A fully fiber-coupled infrared laser heterodyne interferometer has been designed in order to serve as the primary line-integrated electron density diagnostic. Thanks to advances in the communications industry many fiber optic devices and phase detection methods have advanced significantly becoming increasingly reliable and inexpensive. Fully fiber coupling a plasma interferometer greatly simplifies alignment procedures needed since the only free space laser path needing alignment is through the plasma itself. Fiber-coupling also provides significant resistance to vibrational noise, a common problem in plasma interferometry systems. This device also uses a greatly simplified phase detection scheme in which chips, originally developed for the communications industry, capable of directly detecting the phase shift of a signal with high time resolution. The design and initial performance of the system will be discussed.

  12. Alternate MIMO relaying with three AF relays using interference alignment

    KAUST Repository

    Park, Kihong

    2012-06-01

    In this paper, we study a two-hop half-duplex relaying network with one source, one destination, and three amplify-and-forward (AF) relays equipped with M antennas each. We consider alternate transmission to compensate for the inherent loss of capacity pre-log factor 1/2 in half duplex mode, where source transmit message to two relays and the other relay alternately. The inter-relay interference caused by alternate transmission is aligned to make additional degrees of freedom (DOFs). It is shown that the proposed scheme enables us to exploit 3M/4 DOFs compared with the M/2 DOFs of conventional AF relaying. More specifically, suboptimal linear filter designs for a source and three relays are proposed to maximize the achievable sum-rate. We verify using some selected numerical results that the proposed filter designs give significant improvement of the sum-rate over a naive filter and conventional relaying schemes. © 2012 IEEE.

  13. Theoretical and practical feasibility demonstration of a micrometric remotely controlled pre-alignment system for the CLIC linear collider

    CERN Document Server

    Mainaud Durand, H; Chritin, N; Griffet, S; Kemppinen, J; Sosin, M; Touze, T

    2011-01-01

    The active pre-alignment of the Compact Linear Collider (CLIC) is one of the key points of the project: the components must be pre-aligned w.r.t. a straight line within a few microns over a sliding window of 200 m, along the two linacs of 20 km each. The proposed solution consists of stretched wires of more than 200 m, overlapping over half of their length, which will be the reference of alignment. Wire Positioning Sensors (WPS), coupled to the supports to be pre-aligned, will perform precise and accurate measurements within a few microns w.r.t. these wires. A micrometric fiducialisation of the components and a micrometric alignment of the components on common supports will make the strategy of pre-alignment complete. In this paper, the global strategy of active pre-alignment is detailed and illustrated by the latest results demonstrating the feasibility of the proposed solution.

  14. Aiming Perfectly in the Dark - Blind Interference Alignment through Staggered Antenna Switching

    CERN Document Server

    Wang, Chenwei; Jafar, Syed A

    2010-01-01

    We propose a blind interference alignment scheme for the vector broadcast channel where the transmitter is equipped with M antennas and there are K receivers, each equipped with a reconfigurable antenna capable of switching among M preset modes. Without any knowledge of the channel coefficient values at the transmitters and with only mild assumptions on the channel coherence structure we show that MK/M+K-1 degrees of freedom are achievable. The key to the blind interference alignment scheme is the ability of the receivers to switch between reconfigurable antenna modes to create short term channel fluctuation patterns that are exploited by the transmitter. The achievable scheme does not require cooperation between transmit antennas and is therefore applicable to the MxK X network as well. Only finite symbol extensions are used, and no channel knowledge at the receivers is required to null the interference.

  15. Aligning seminars with Bologna requirements

    DEFF Research Database (Denmark)

    Lueg, Klarissa; Lueg, Rainer; Lauridsen, Ole

    2016-01-01

    Changes in public policy, such as the Bologna Process, require students to be equipped with multifunctional competencies to master relevant tasks in unfamiliar situations. Achieving this goal might imply a change in many curricula toward deeper learning. As a didactical means to achieve deep...... learning results, the authors suggest reciprocal peer tutoring (RPT); as a conceptual framework the authors suggest the SOLO (Structure of Observed Learning Outcomes) taxonomy and constructive alignment as suggested by Biggs and Tang. Our study presents results from the introduction of RPT in a large...... course. The authors find that RPT produces satisfying learning outcomes, active students, and ideal constructive alignments of the seminar content with the exam, the intended learning outcomes, and the requirements of the Bologna Process. Our data, which comprise surveys and evaluations from both faculty...

  16. Prism Window for Optical Alignment

    Science.gov (United States)

    Tang, Hong

    2008-01-01

    A prism window has been devised for use, with an autocollimator, in aligning optical components that are (1) required to be oriented parallel to each other and/or at a specified angle of incidence with respect to a common optical path and (2) mounted at different positions along the common optical path. The prism window can also be used to align a single optical component at a specified angle of incidence. Prism windows could be generally useful for orienting optical components in manufacture of optical instruments. "Prism window" denotes an application-specific unit comprising two beam-splitter windows that are bonded together at an angle chosen to obtain the specified angle of incidence.

  17. Shuttle onboard IMU alignment methods

    Science.gov (United States)

    Henderson, D. M.

    1976-01-01

    The current approach to the shuttle IMU alignment is based solely on the Apollo Deterministic Method. This method is simple, fast, reliable and provides an accurate estimate for the present cluster to mean of 1,950 transformation matrix. If four or more star sightings are available, the application of least squares analysis can be utilized. The least squares method offers the next level of sophistication to the IMU alignment solution. The least squares method studied shows that a more accurate estimate for the misalignment angles is computed, and the IMU drift rates are a free by-product of the analysis. Core storage requirements are considerably more; estimated 20 to 30 times the core required for the Apollo Deterministic Method. The least squares method offers an intermediate solution utilizing as much data that is available without a complete statistical analysis as in Kalman filtering.

  18. Aligned mesoporous architectures and devices.

    Energy Technology Data Exchange (ETDEWEB)

    Brinker, C. Jeffrey; Lu, Yunfeng (University of California Los Angeles, Los Angeles, CA)

    2011-03-01

    This is the final report for the Presidential Early Career Award for Science and Engineering - PECASE (LDRD projects 93369 and 118841) awarded to Professor Yunfeng Lu (Tulane University and University of California-Los Angeles). During the last decade, mesoporous materials with tunable periodic pores have been synthesized using surfactant liquid crystalline as templates, opening a new avenue for a wide spectrum of applications. However, the applications are somewhat limited by the unfavorabe pore orientation of these materials. Although substantial effort has been devoted to align the pore channels, fabrication of mesoporous materials with perpendicular pore channels remains challenging. This project focused on fabrication of mesoporous materials with perpendicularly aligned pore channels. We demonstrated structures for use in water purification, separation, sensors, templated synthesis, microelectronics, optics, controlled release, and highly selective catalysts.

  19. Doping Scheme of Semiconducting Atomic Chains

    Science.gov (United States)

    Toshishige, Yamada; Saini, Subhash (Technical Monitor)

    1998-01-01

    Atomic chains, precise structures of atomic scale created on an atomically regulated substrate surface, are candidates for future electronics. A doping scheme for intrinsic semiconducting Mg chains is considered. In order to suppress the unwanted Anderson localization and minimize the deformation of the original band shape, atomic modulation doping is considered, which is to place dopant atoms beside the chain periodically. Group I atoms are donors, and group VI or VII atoms are acceptors. As long as the lattice constant is long so that the s-p band crossing has not occurred, whether dopant atoms behave as donors or acceptors is closely related to the energy level alignment of isolated atomic levels. Band structures are calculated for Br-doped (p-type) and Cs-doped (n-type) Mg chains using the tight-binding theory with universal parameters, and it is shown that the band deformation is minimized and only the Fermi energy position is modified.

  20. The Cluster Substructure - Alignment Connection

    OpenAIRE

    Plionis, Manolis

    2001-01-01

    Using the APM cluster data we investigate whether the dynamical status of clusters is related to the large-scale structure of the Universe. We find that cluster substructure is strongly correlated with the tendency of clusters to be aligned with their nearest neighbour and in general with the nearby clusters that belong to the same supercluster. Furthermore, dynamically young clusters are more clustered than the overall cluster population. These are strong indications that cluster develop in ...

  1. Comparing document classification schemes using k-means clustering

    OpenAIRE

    Šivić, Artur; Žmak, Lovro; Dalbelo Bašić, Bojana; Moens, Marie-Francine

    2008-01-01

    In this work, we jointly apply several text mining methods to a corpus of legal documents in order to compare the separation quality of two inherently different document classification schemes. The classification schemes are compared with the clusters produced by the k-means algorithm. In the future, we believe that our comparison method will be coupled with semi-supervised and active learning techniques. Also, this paper presents the idea of combining k-means and Principal Component Analysis...

  2. Breakdown of unitarity in the dimensional reduction scheme

    OpenAIRE

    Hooft, G. 't; Van Damme, R.

    1985-01-01

    B-functions of any field theory using different regularization schemes should obey the physical rule that they can be transformed into each other by a finite transformation of the renormalized coupling constants in the theory. The dimensional reduction scheme does not obey this rule. The cause is that unacceptable counterterms had to be used where overlapping divergencies occur, so that unitarity is violated. Supersymmetry (or at least the N = 2 and N = 4 supersymmetric gauge theories and all...

  3. High anisotropy of flow-aligned bicellar membrane systems

    KAUST Repository

    Kogan, Maxim

    2013-10-01

    In recent years, multi-lipid bicellar systems have emerged as promising membrane models. The fast orientational diffusion and magnetic alignability made these systems very attractive for NMR investigations. However, their alignment was so far achieved with a strong magnetic field, which limited their use with other methods that require macroscopic orientation. Recently, it was shown that bicelles could be aligned also by shear flow in a Couette flow cell, making it applicable to structural and biophysical studies by polarized light spectroscopy. Considering the sensitivity of this lipid system to small variations in composition and physicochemical parameters, efficient use of such a flow-cell method with coupled techniques will critically depend on the detailed understanding of how the lipid systems behave under flow conditions. In the present study we have characterized the flow alignment behavior of the commonly used dimyristoyl phosphatidylcholine/dicaproyl phosphatidylcholine (DMPC/DHPC) bicelle system, for various temperatures, lipid compositions, and lipid concentrations. We conclude that at optimal flow conditions the selected bicellar systems can produce the most efficient flow alignment out of any lipid systems used so far. The highest degree of orientation of DMPC/DHPC samples is noticed in a narrow temperature interval, at a practical temperature around 25 C, most likely in the phase transition region characterized by maximum sample viscosity. The change of macroscopic orientation factor as function of the above conditions is now described in detail. The increase in macroscopic alignment observed for bicelles will most likely allow recording of higher resolution spectra on membrane systems, which provide deeper structural insight and analysis into properties of biomolecules interacting with solution phase lipid membranes. © 2013 Elsevier Ireland Ltd.

  4. Grain alignment in starless cores

    Energy Technology Data Exchange (ETDEWEB)

    Jones, T. J.; Bagley, M. [Minnesota Institute for Astrophysics, University of Minnesota, Minneapolis, MN 55455 (United States); Krejny, M. [Cree Inc., 4600 Silicon Dr., Durham, NC (United States); Andersson, B.-G. [SOFIA Science Center, USRA, Moffett Field, CA (United States); Bastien, P., E-mail: tjj@astro.umn.edu [Centre de recherche en astrophysique du Québec and Départment de Physique, Université de Montréal, Montréal (Canada)

    2015-01-01

    We present near-IR polarimetry data of background stars shining through a selection of starless cores taken in the K band, probing visual extinctions up to A{sub V}∼48. We find that P{sub K}/τ{sub K} continues to decline with increasing A{sub V} with a power law slope of roughly −0.5. Examination of published submillimeter (submm) polarimetry of starless cores suggests that by A{sub V}≳20 the slope for P versus τ becomes ∼−1, indicating no grain alignment at greater optical depths. Combining these two data sets, we find good evidence that, in the absence of a central illuminating source, the dust grains in dense molecular cloud cores with no internal radiation source cease to become aligned with the local magnetic field at optical depths greater than A{sub V}∼20. A simple model relating the alignment efficiency to the optical depth into the cloud reproduces the observations well.

  5. Direct Uniaxial Alignment of a Donor-Acceptor Semiconducting Polymer Using Single-Step Solution Shearing.

    Science.gov (United States)

    Shaw, Leo; Hayoz, Pascal; Diao, Ying; Reinspach, Julia Antonia; To, John W F; Toney, Michael F; Weitz, R Thomas; Bao, Zhenan

    2016-04-13

    The alignment of organic semiconductors (OSCs) in the active layers of electronic devices can confer desirable properties, such as enhanced charge transport properties due to better ordering, charge transport anisotropy for reduced device cross-talk, and polarized light emission or absorption. The solution-based deposition of highly aligned small molecule OSCs has been widely demonstrated, but the alignment of polymeric OSCs in thin films deposited directly from solution has typically required surface templating or complex pre- or postdeposition processing. Therefore, single-step solution processing and the charge transport enhancement afforded by alignment continue to be attractive. We report here the use of solution shearing to tune the degree of alignment in poly(diketopyrrolopyrrole-terthiophene) thin films by controlling the coating speed. A maximum dichroic ratio of ∼7 was achieved on unpatterned substrates without any additional pre- or postdeposition processing. The degree of polymer alignment was found to be a competition between the shear alignment of polymer chains in solution and the complex thin film drying process. Contrary to previous reports, no charge transport anisotropy was observed because of the small crystallite size relative to the channel length, a meshlike morphology, and the likelihood of increased grain boundaries in the direction transverse to coating. In fact, the lack of aligned morphological structures, coupled with observed anisotropy in X-ray diffraction data, suggests the alignment of polymer molecules in both the crystalline and the amorphous regions of the films. The shear speed at which maximum dichroism is achieved can be controlled by altering deposition parameters such as temperature and substrate treatment. Modest changes in molecular weight showed negligible effects on alignment, while longer polymer alkyl side chains were found to reduce the degree of alignment. This work demonstrates that solution shearing can be used

  6. Cactus: Algorithms for genome multiple sequence alignment

    OpenAIRE

    Paten, Benedict; Earl, Dent; Nguyen, Ngan; Diekhans, Mark; Zerbino, Daniel; Haussler, David

    2011-01-01

    Much attention has been given to the problem of creating reliable multiple sequence alignments in a model incorporating substitutions, insertions, and deletions. Far less attention has been paid to the problem of optimizing alignments in the presence of more general rearrangement and copy number variation. Using Cactus graphs, recently introduced for representing sequence alignments, we describe two complementary algorithms for creating genomic alignments. We have implemented these algorithms...

  7. Bonus schemes and trading activity

    NARCIS (Netherlands)

    Pikulina, E.S.; Renneboog, L.D.R.; ter Horst, J.R.; Tobler, P.N.

    2014-01-01

    Little is known about how different bonus schemes affect traders' propensity to trade and which bonus schemes improve traders' performance. We study the effects of linear versus threshold bonus schemes on traders' behavior. Traders buy and sell shares in an experimental stock market on the basis of

  8. A New Deferred Sentencing Scheme

    Directory of Open Access Journals (Sweden)

    N. K. Chakravarti

    1968-10-01

    Full Text Available A new deferred sentencing scheme resembling double sampling scheme has been suggested from viewpoint of operational and administrative. It is recommended particularly when the inspection is destructive. The O.C. curves of the scheme for two sample sizes of 5 and 10 have been given.

  9. Two Improved Digital Signature Schemes

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    In this paper, two improved digital signature schemes are presented based on the design of directed signaturescheme [3]. The peculiarity of the system is that only if the scheme is specific recipient, the signature is authenticated.Since the scheme adds the screen of some information parameters, the difficulty of deciphered keys and the security ofdigital signature system are increased.

  10. Chemical Structure and Reaction Scheme of Modified Bamboo Powder with Silane Coupling Agent%硅烷偶联剂处理竹粉化学结构变化及其反应路径

    Institute of Scientific and Technical Information of China (English)

    陈钦慧; 白卫斌; 徐艳莲; 林金火

    2012-01-01

    The bamboo powder modified with the silane coupling agent of KH-560 (KB) was studied by X-ray photoelectron spec-troscopy (XPS) , X-ray diffraction (XRD) and Fourier transform infrared (FT-IR) spectroscope. The modified mechanism was also investigated in this work. Results showed that the hydrolysis of KH-560 was found to enhance the attachment on the surface of bamboo powder by the formation of hydrogen bond and dehydration condensation. XRD analysis indicated that the degree of crystallinity of bamboo powder didn't change after the modification by KH-560. However, the reaction of bamboo powder and KH-560 was certified by the appearance of absorption of ether bond in FT-IR spectrum and the XPS peak of silicon at 101. 18 eV. At the same time, the binding energy of C1s changed from 288. 16 eV to 288.52 eV and the peak of oxygen atom ( attributed to C=O) at 530.98 eV disappeared. All results indicated that the reaction between bamboo powder and KH-560 didn't occur on the bamboo fibre due to the exist of the strong hydrogen bonding force, but on the aldehyde groups from lignin at the absence of mechanical force and chemistry reagent.%利用X射线光电子能谱(XPS)、X射线粉末衍射(XRD)和红外光谱(IR)研究硅烷偶联剂(KH-560)改性前后竹粉结构的变化,并推测硅烷偶联剂对竹粉表面改性的机理.实验结果表明,KH-560水解后,通过形成氢键和脱水缩合两个阶段结合到竹粉的表面.硅烷偶联剂改性后的竹粉结晶结构没有明显的变化,IR谱图出现了醚键的吸收,XPS在101.18 eV处出现了Si的发射峰,C1s分峰所对应的结合能由288.16 eV变为288.52 eV,氧原子在530.98 eV处C=O双键的分峰消失,说明在没有外力或化学试剂作用的情况下,竹纤维素分子间较强的相互作用力使反应无法发生在竹纤维素上,而主要是在木质素的醛基C=O上进行.

  11. Hardware Acceleration of Bioinformatics Sequence Alignment Applications

    NARCIS (Netherlands)

    Hasan, L.

    2011-01-01

    Biological sequence alignment is an important and challenging task in bioinformatics. Alignment may be defined as an arrangement of two or more DNA or protein sequences to highlight the regions of their similarity. Sequence alignment is used to infer the evolutionary relationship between a set of pr

  12. Physician-Hospital Alignment in Orthopedic Surgery.

    Science.gov (United States)

    Bushnell, Brandon D

    2015-09-01

    The concept of "alignment" between physicians and hospitals is a popular buzzword in the age of health care reform. Despite their often tumultuous histories, physicians and hospitals find themselves under increasing pressures to work together toward common goals. However, effective alignment is more than just simple cooperation between parties. The process of achieving alignment does not have simple, universal steps. Alignment will differ based on individual situational factors and the type of specialty involved. Ultimately, however, there are principles that underlie the concept of alignment and should be a part of any physician-hospital alignment efforts. In orthopedic surgery, alignment involves the clinical, administrative, financial, and even personal aspects of a surgeon's practice. It must be based on the principles of financial interest, clinical authority, administrative participation, transparency, focus on the patient, and mutual necessity. Alignment can take on various forms as well, with popular models consisting of shared governance and comanagement, gainsharing, bundled payments, accountable care organizations, and other methods. As regulatory and financial pressures continue to motivate physicians and hospitals to develop alignment relationships, new and innovative methods of alignment will also appear. Existing models will mature and evolve, with individual variability based on local factors. However, certain trends seem to be appearing as time progresses and alignment relationships deepen, including regional and national collaboration, population management, and changes in the legal system. This article explores the history, principles, and specific methods of physician-hospital alignment and its critical importance for the future of health care delivery.

  13. An Overview of Multiple Sequence Alignment Systems

    CERN Document Server

    Saeed, Fahad

    2009-01-01

    An overview of current multiple alignment systems to date are described.The useful algorithms, the procedures adopted and their limitations are presented.We also present the quality of the alignments obtained and in which cases(kind of alignments, kind of sequences etc) the particular systems are useful.

  14. A cross-species alignment tool (CAT)

    DEFF Research Database (Denmark)

    Li, Heng; Guan, Liang; Liu, Tao;

    2007-01-01

    sensitive methods which are usually applied in aligning inter-species sequences. RESULTS: Here we present a new algorithm called CAT (for Cross-species Alignment Tool). It is designed to align mRNA sequences to mammalian-sized genomes. CAT is implemented using C scripts and is freely available on the web...

  15. Inferring comprehensible business/ICT alignment rules

    NARCIS (Netherlands)

    Cumps, B.; Martens, D.; De Backer, M.; Haesen, R.; Viaene, S.; Dedene, G.; Baesens, B.; Snoeck, M.

    2009-01-01

    We inferred business rules for business/ICT alignment by applying a novel rule induction algorithm on a data set containing rich alignment information polled from 641 organisations in 7 European countries. The alignment rule set was created using AntMiner+, a rule induction technique with a reputati

  16. Shift dynamics of capillary self-alignment

    NARCIS (Netherlands)

    Arutinov, G.; Mastrangeli, M.; Smits, E.C.P.; Heck, G.V.; Schoo, H.F.M.; Toonder, J.J.M. den; Dietzel, A.H.

    2014-01-01

    This paper describes the dynamics of capillary self-alignment of components with initial shift offsets from matching receptor sites. The analysis of the full uniaxial self-alignment dynamics of foil-based mesoscopic dies from pre-alignment to final settling evidenced three distinct, sequential regim

  17. Alignment of lower-limb prostheses.

    Science.gov (United States)

    Zahedi, M S; Spence, W D; Solomonidis, S E; Paul, J P

    1986-04-01

    Alignment of a prosthesis is defined as the position of the socket relative to the other prosthetic components of the limb. During dynamic alignment the prosthetist, using subjective judgment and feedback from the patient, aims to achieve the most suitable limb geometry for best function and comfort. Until recently it was generally believed that a patient could only be satisfied with a unique "optimum alignment." The purpose of this systematic study of lower-limb alignment parameters was to gain an understanding of the factors that make a limb configuration or optimum alignment, acceptable to the patient, and to obtain a measure of the variation of this alignment that would be acceptable to the amputee. In this paper, the acceptable range of alignments for 10 below- and 10 above-knee amputees are established. Three prosthetists were involved in the majority of the 183 below-knee and 100 above-knee fittings, although several other prosthetists were also involved. The effects of each different prosthetist on the established range of alignment for each patient are reported to be significant. It is now established that an amputee can tolerate several alignments ranging in some parameters by as much as 148 mm in shifts and 17 degrees in tilts. This paper describes the method of defining and measuring the alignment of lower-limb prostheses. It presents quantitatively established values for bench alignment position and the range of adjustment required for incorporation into the design of new alignment units.

  18. Aligning Projection Images from Binary Volumes

    NARCIS (Netherlands)

    Bleichrodt, F.; Beenhouwer, J. de; Sijbers, J.; Batenburg, K.J.

    2014-01-01

    In tomography, slight differences between the geometry of the scanner hardware and the geometric model used in the reconstruction lead to alignment artifacts. To exploit high-resolution detectors used in many applications of tomography, alignment of the projection data is essential. Markerless align

  19. Strategic Alignment and New Product Development

    DEFF Research Database (Denmark)

    Acur, Nuran; Kandemir, Destan; Boer, Harry

    2012-01-01

    Strategic alignment is widely accepted as a prerequisite for a firm’s success, but insight into the role of alignment in, and its impact on, the new product evelopment (NPD) process and its performance is less well developed. Most publications on this topic either focus on one form of alignment o...

  20. A hybrid TIM-NOMA scheme for the Broadcast Channel

    Directory of Open Access Journals (Sweden)

    V. Kalokidou

    2015-07-01

    Full Text Available Future mobile communication networks will require enhanced network efficiency and reduced system overhead. Research on Blind Interference Alignment and Topological Interference Management (TIM has shown that optimal Degrees of Freedom can be achieved, in the absence of Channel State Information at the transmitters. Moreover, the recently emerged Non- Orthogonal Multiple Access (NOMA scheme suggests a different multiple access approach, compared to the orthogonal methods employed in 4G, resulting in high capacity gains. Our contribution is a hybrid TIM-NOMA scheme in K-user cells, where users are divided into T groups. By superimposing users in the power domain, we introduce a two-stage decoding process, managing “inter-group” interference based on the TIM principles, and “intra-group” interference based on Successful Interference Cancellation, as proposed by NOMA. We show that the hybrid scheme can improve the sum rate by at least 100% compared to Time Division Multiple Access, for high SNR values.

  1. CONSIDERATIONS CONCERNING GUARANTEE SCHEMES

    Directory of Open Access Journals (Sweden)

    EMILIA CLIPICI

    2013-05-01

    Full Text Available When a large withdrawal from banks occurs, customers withdraw their deposits, so banks are likely to go bankrupt because of liquidity problems. There are several mechanisms that allow the banking system to avoid the phenomenon of massive withdrawals from banks. The most effective one is the deposit insurance. The deposit insurance is seen primarily as a means of protecting depositors of credit institutions, and secondly as a means of ensuring the stability of the banking system. This article described deposit guarantee scheme in Romania and other country.

  2. Infrared Fixed Points in the minimal MOM Scheme

    DEFF Research Database (Denmark)

    Ryttov, Thomas

    2014-01-01

    We analyze the behavior of several renormalization group functions at infrared fixed points for $SU(N)$ gauge theories with fermions in the fundamental and two-indexed representations. This includes the beta function of the gauge coupling, the anomalous dimension of the gauge parameter...... and the anomalous dimension of the mass. The scheme in which the analysis is performed is the minimal momentum subtraction scheme through third loop order. Due to the fact that scheme dependence is inevitable once the perturbation theory is truncated we compare to previous identical studies done in the minimal...

  3. New high-spin level schemes and excitation modes of {sup 117,118,119,120,122}Cd

    Energy Technology Data Exchange (ETDEWEB)

    Luo, Y.X. [Physics Department, Vanderbilt University, Nashville, TN 37235 (United States); Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Rasmussen, J.O., E-mail: jorasmussen@lbl.gov [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Department of Chemistry, U.C. Berkeley, Berkeley, CA 94720 (United States); Nelson, C.S.; Hamilton, J.H.; Ramayya, A.V.; Hwang, J.K. [Physics Department, Vanderbilt University, Nashville, TN 37235 (United States); Liu, S.H. [Physics Department, Vanderbilt University, Nashville, TN 37235 (United States); Joint Institute for Heavy Ion Research, Oak Ridge, TN 37831 (United States); Goodin, C. [Physics Department, Vanderbilt University, Nashville, TN 37235 (United States); Stone, N.J. [Department of Physics, Oxford University, Oxford OX1 3PU (United Kingdom); Department of Physics and Astronomy, University of Tennessee, Knoxville, TN 37996 (United States); Zhu, S.J. [Physics Department, Vanderbilt University, Nashville, TN 37235 (United States); Department of Physics, Tsinghua University, Beijing 100084 (China); Brewer, N.T.; Li Ke [Physics Department, Vanderbilt University, Nashville, TN 37235 (United States); Lee, I.Y. [Lawrence Berkeley National Laboratory, Berkeley, CA 94720 (United States); Ter-Akopian, G.M. [Flerov Laboratory for Nuclear Reactions, JINR, Dubna (Russian Federation); Daniel, A.V. [Physics Dept., Vanderbilt University, Nashville, TN 37235 (United States); Flerov Laboratory for Nuclear Reactions, JINR, Dubna (Russian Federation); Joint Inst. for Heavy Ion Research, Oak Ridge, TN 37831 (United States); Stoyer, M.A. [Lawrence Livermore National Lab., Livermore, CA 94550 (United States); Donangelo, R. [Facultad de Ingenieria, C.C.30, 11300 Montevideo (Uruguay); Ma, W.C. [Mississippi State Univ., Drawer 5167, Mississippi State, MS 39762 (United States); Cole, J.D. [Idaho National Laboratory, Bldg. IRCPL, MS2114, Idaho Falls, ID 83415 (United States)

    2012-01-15

    High-spin level schemes of {sup 117,118,119,120,122}Cd are expanded by analyzing our high-statistics triple- and higher-fold coincidence events of prompt fission {gamma} rays from {sup 252}Cf at Gammasphere. Spin/parity assignments were made based on new {gamma}-{gamma} angular correlation measurements and level systematics in the neighboring isotopes. Stretch-aligned band structures observed in low-lying levels in {sup 117,119,121}Cd are seen to weaken with increasing spins, with a quasi-rotational degree of freedom manifested at higher spins. The 5{sup -} levels in even-N{sup 118,120}Cd were tentatively interpreted as candidates of quadrupole-octupole (QOC) coupling. The model-independent spin versus Planck-Constant-Over-Two-Pi {omega} curves for even-N and odd-N Cd isotopes imply quasi-rotational alignment of an h{sub 11/2} neutron pair in the even-N Cd isotopes. The relative energies of the lowest 11/2{sup -}, 9/2{sup -}, 7/2{sup -}, and 15/2{sup -} levels in {sup 117}Cd and {sup 119}Cd suggest triaxial shapes based on Meyer-Ter-Vehn theory for these odd-N Cd nuclei. For the even-N Cd isotopes evidence of triaxiality may also be provided by the Shell Correction version of the Tilted Axis Cranking model (SCTAC).

  4. Coupled transfers; Transferts couples

    Energy Technology Data Exchange (ETDEWEB)

    Nicolas, X.; Lauriat, G.; Jimenez-Rondan, J. [Universite de Marne-la-Vallee, Lab. d' Etudes des Transferts d' Energie et de Matiere (LETEM), 77 (France); Bouali, H.; Mezrhab, A. [Faculte des Sciences, Dept. de Physique, Lab. de Mecanique et Energetique, Oujda (Morocco); Abid, C. [Ecole Polytechnique Universitaire de Marseille, IUSTI UMR 6595, 13 Marseille (France); Stoian, M.; Rebay, M.; Lachi, M.; Padet, J. [Faculte des Sciences, Lab. de Thermomecanique, UTAP, 51 - Reims (France); Mladin, E.C. [Universitaire Polytechnique Bucarest, Faculte de Genie Mecanique, Bucarest (Romania); Mezrhab, A. [Faculte des Sciences, Lab. de Mecanique et Energetique, Dept. de Physique, Oujda (Morocco); Abid, C.; Papini, F. [Ecole Polytechnique, IUSTI, 13 - Marseille (France); Lorrette, C.; Goyheneche, J.M.; Boechat, C.; Pailler, R. [Laboratoire des Composites ThermoStructuraux, UMR 5801, 33 - Pessac (France); Ben Salah, M.; Askri, F.; Jemni, A.; Ben Nasrallah, S. [Ecole Nationale d' Ingenieurs de Monastir, Lab. d' Etudes des Systemes Thermiques et Energetiques (Tunisia); Grine, A.; Desmons, J.Y.; Harmand, S. [Laboratoire de Mecanique et d' Energetique, 59 - Valenciennes (France); Radenac, E.; Gressier, J.; Millan, P. [ONERA, 31 - Toulouse (France); Giovannini, A. [Institut de Mecanique des Fluides de Toulouse, 31 (France)

    2005-07-01

    This session about coupled transfers gathers 30 articles dealing with: numerical study of coupled heat transfers inside an alveolar wall; natural convection/radiant heat transfer coupling inside a plugged and ventilated chimney; finite-volume modeling of the convection-conduction coupling in non-stationary regime; numerical study of the natural convection/radiant heat transfer coupling inside a partitioned cavity; modeling of the thermal conductivity of textile reinforced composites: finite element homogenization on a full periodical pattern; application of the control volume method based on non-structured finite elements to the problems of axisymmetrical radiant heat transfers in any geometries; modeling of convective transfers in transient regime on a flat plate; a conservative method for the non-stationary coupling of aero-thermal engineering codes; measurement of coupled heat transfers (forced convection/radiant transfer) inside an horizontal duct; numerical simulation of the combustion of a water-oil emulsion droplet; numerical simulation study of heat and mass transfers inside a reactor for nano-powders synthesis; reduction of a combustion and heat transfer model of a direct injection diesel engine; modeling of heat transfers inside a knocking operated spark ignition engine; heat loss inside an internal combustion engine, thermodynamical and flamelet model, composition effects of CH{sub 4}H{sub 2} mixtures; experimental study and modeling of the evolution of a flame on a solid fuel; heat transfer for laminar subsonic jet of oxygen plasma impacting an obstacle; hydrogen transport through a A-Si:H layer submitted to an hydrogen plasma: temperature effects; thermal modeling of the CO{sub 2} laser welding of a magnesium alloy; radiant heat transfer inside a 3-D environment: application of the finite volume method in association with the CK model; optimization of the infrared baking of two types of powder paints; optimization of the emission power of an infrared

  5. Parametric image alignment using enhanced correlation coefficient maximization.

    Science.gov (United States)

    Evangelidis, Georgios D; Psarakis, Emmanouil Z

    2008-10-01

    In this work we propose the use of a modified version of the correlation coefficient as a performance criterion for the image alignment problem. The proposed modification has the desirable characteristic of being invariant with respect to photometric distortions. Since the resulting similarity measure is a nonlinear function of the warp parameters, we develop two iterative schemes for its maximization, one based on the forward additive approach and the second on the inverse compositional method. As it is customary in iterative optimization, in each iteration, the nonlinear objective function is approximated by an alternative expression for which the corresponding optimization is simple. In our case we propose an efficient approximation that leads to a closed-form solution (per iteration) which is of low computational complexity, the latter property being particularly strong in our inverse version. The proposed schemes are tested against the Forward Additive Lucas-Kanade and the Simultaneous Inverse Compositional (SIC) algorithm through simulations. Under noisy conditions and photometric distortions, our forward version achieves more accurate alignments and exhibits faster convergence whereas our inverse version has similar performance as the SIC algorithm but at a lower computational complexity.

  6. The Relationship Between Foot and Pelvic Alignment While Standing

    Directory of Open Access Journals (Sweden)

    Khamis Sam

    2015-06-01

    Full Text Available A normal motion and segmental interrelationship has been determined as a significant factor in normal function. Yet, the relationship between distal segments and pelvic alignment needs further investigation. The aim of this study was to investigate the interrelationship between distal and proximal lower extremity segments while standing and during induced feet hyperpronation. Changes in alignment of the pelvis and lower extremities were measured at a gait laboratory using the VICON 612 computerized motion analysis system. Thirty-five healthy volunteer subjects were recruited. Four randomized repeated-measure standing modes were used: standing directly on the floor and then on three wedges angled at 10°, 15° and 20° to induce bilateral hyperpronation for 20 seconds. A significant (p<0.05 bi-variate relationship was found between the anterior pelvic tilt and thigh internal rotation, in all four standing positions (.41≤r≤.46, in all p<0.014. A combined effect of rotational alignment between segments and the cumulative effect of foot hyperpronation on pelvic tilt revealed that only the shank significantly affected pelvic alignment, acting as a mediator between a foot and a thigh with the thigh having a crude significant effect on the pelvis. When internal rotation of the shank occurs, calcaneal eversion couples with thigh internal rotation and anterior pelvic tilt. It can be concluded that in response to induced hyperpronation, the shank is a pivotal segment in postural adjustment.

  7. How the cosmic web induces intrinsic alignments of galaxies

    CERN Document Server

    Codis, Sandrine; Pichon, Christophe; Devriendt, Julien; Slyz, Adrianne

    2014-01-01

    Intrinsic alignments are believed to be a major source of systematics for future generation of weak gravitational lensing surveys like Euclid or LSST. Direct measurements of the alignment of the projected light distribution of galaxies in wide field imaging data seem to agree on a contamination at a level of a few per cent of the shear correlation functions, although the amplitude of the effect depends on the population of galaxies considered. Given this dependency, it is difficult to use dark matter-only simulations as the sole resource to predict and control intrinsic alignments. We report here estimates on the level of intrinsic alignment in the cosmological hydrodynamical simulation Horizon-AGN that could be a major source of systematic errors in weak gravitational lensing measurements. In particular, assuming that the spin of galaxies is a good proxy for their ellipticity, we show how those spins are spatially correlated and how they couple to the tidal field in which they are embedded. We also present t...

  8. How the cosmic web induces intrinsic alignments of galaxies

    Science.gov (United States)

    Codis, S.; Dubois, Y.; Pichon, C.; Devriendt, J.; Slyz, A.

    2016-10-01

    Intrinsic alignments are believed to be a major source of systematics for future generation of weak gravitational lensing surveys like Euclid or LSST. Direct measurements of the alignment of the projected light distribution of galaxies in wide field imaging data seem to agree on a contamination at a level of a few per cent of the shear correlation functions, although the amplitude of the effect depends on the population of galaxies considered. Given this dependency, it is difficult to use dark matter-only simulations as the sole resource to predict and control intrinsic alignments. We report here estimates on the level of intrinsic alignment in the cosmological hydrodynamical simulation Horizon-AGN that could be a major source of systematic errors in weak gravitational lensing measurements. In particular, assuming that the spin of galaxies is a good proxy for their ellipticity, we show how those spins are spatially correlated and how they couple to the tidal field in which they are embedded. We will also present theoretical calculations that illustrate and qualitatively explain the observed signals.

  9. OPERATIONAL MODAL ANALYSIS SCHEMES USING CORRELATION TECHNIQUE

    Institute of Scientific and Technical Information of China (English)

    Zheng Min; Shen Fan; Chen Huaihai

    2005-01-01

    For some large-scale engineering structures in operating conditions, modal parameters estimation must base itself on response-only data. This problem has received a considerable amount of attention in the past few years. It is well known that the cross-correlation function between the measured responses is a sum of complex exponential functions of the same form as the impulse response function of the original system. So this paper presents a time-domain operating modal identification global scheme and a frequency-domain scheme from output-only by coupling the cross-correlation function with conventional modal parameter estimation. The outlined techniques are applied to an airplane model to estimate modal parameters from response-only data.

  10. Secure mediated certificateless signature scheme

    Institute of Scientific and Technical Information of China (English)

    YANG Chen; MA Wen-ping; WANG Xin-mei

    2007-01-01

    Ju et al proposed a certificateless signature scheme with instantaneous revocation by introducing security mediator (SEM) mechanism. This article presents a detailed cryptoanalysis of this scheme and shows that, in their proposed scheme, once a valid signature has been produced, the signer can recover his private key information and the instantaneous revocation property will be damaged. Furthermore, an improved mediated signature scheme, which can eliminate these disadvantages, is proposed, and security proof of the improved scheme under elliptic curve factorization problem (ECFP) assumption and bilinear computational diffie-hellman problem (BCDH) assumption is also proposed.

  11. Shape-based discriminative analysis of combined bilateral hippocampi using multiple object alignment

    Science.gov (United States)

    Shen, Li; Makedon, Fillia; Saykin, Andrew

    2004-05-01

    Shape analysis of hippocampi in schizophrenia has been preformed previously using the spherical harmonic SPHARM description. In these studies, the left and right hippocampi are aligned independently and the spatial relation between them is not explored. This paper presents a new SPHARM-based technique which examines not only the individual shape information of the two hippocampi but also the spatial relation between them. The left and right hippocampi are treated as a single shape configuration. A ploy-shape alignment algorithm is developed for aligning configurations of multiple SPHARM surfaces as follows: (1) the total volume is normalized; (2) the parameter space is aligned for creating the surface correspondence; (3) landmarks are created by a uniform sampling of multiple surfaces for each configuration; (4) a quaternion-based algorithm is employed to align each landmark representation to the mean configuration through the least square rotation and translation iteratively until the mean converges. After applying the poly-shape alignment algorithm, a point distribution model is applied to aligned landmarks for feature extraction. Classification is performed using Fisher's linear discriminant with an effective feature selection scheme. Applying the above procedure to our hippocampal data (14 controls versus 25 schizophrenics, all right-handed males), we achieve the best cross-validation accuracy of 92%, supporting the idea that the whole shape configuration of the two hippocampi provides valuable information in detecting schizophrenia. The results of an ROC analysis and a visualization of discriminative patterns are also included.

  12. Interference Alignment-based Precoding and User Selection with Limited Feedback in Two-cell Downlink Multi-user MIMO Systems

    Directory of Open Access Journals (Sweden)

    Yin Zhu

    2016-05-01

    Full Text Available Interference alignment (IA is a new approach to address interference in modern multiple-input multiple-out (MIMO cellular networks in which interference is an important factor that limits the system throughput. System throughput in most IA implementation schemes is significantly improved only with perfect channel state information and in a high signal-to-noise ratio (SNR region. Designing a simple IA scheme for the system with limited feedback and investigating system performance at a low-to-medium SNR region is important and practical. This paper proposed a precoding and user selection scheme based on partial interference alignment in two-cell downlink multi-user MIMO systems under limited feedback. This scheme aligned inter-cell interference to a predefined direction by designing user’s receive antenna combining vectors. A modified singular value decomposition (SVD-based beamforming method and a corresponding user-selection algorithm were proposed for the system with low rate limited feedback to improve sum rate performance. Simulation results show that the proposed scheme achieves a higher sum rate than traditional schemes without IA. The modified SVD-based beamforming scheme is also superior to the traditional zero-forcing beamforming scheme in low-rate limited feedback systems. The proposed partial IA scheme does not need to collaborate between transmitters and joint design between the transmitter and the users. The scheme can be implemented with low feedback overhead in current MIMO cellular networks.

  13. Subsonic Mechanical Alignment of Irregular Grains

    CERN Document Server

    Lazarian, Alex

    2007-01-01

    We show that grains can be efficiently aligned by interacting with a subsonic gaseous flow. The alignment arises from grains having irregularities that scatter atoms with different efficiency in the right and left directions. The grains tend to align with long axes perpendicular to magnetic field, which corresponds to Davis-Greenstein predictions, but does not involve magnetic field. For rather conservative factors characterizing the grain helicity and scattering efficiency of impinging atoms, the alignment of helical grains is much more efficient than the Gold-type alignment processes.

  14. Evaluation of sequence alignments and oligonucleotide probes with respect to three-dimensional structure of ribosomal RNA using ARB software package

    Directory of Open Access Journals (Sweden)

    Meier Harald

    2006-05-01

    Full Text Available Abstract Background Availability of high-resolution RNA crystal structures for the 30S and 50S ribosomal subunits and the subsequent validation of comparative secondary structure models have prompted the biologists to use three-dimensional structure of ribosomal RNA (rRNA for evaluating sequence alignments of rRNA genes. Furthermore, the secondary and tertiary structural features of rRNA are highly useful and successfully employed in designing rRNA targeted oligonucleotide probes intended for in situ hybridization experiments. RNA3D, a program to combine sequence alignment information with three-dimensional structure of rRNA was developed. Integration into ARB software package, which is used extensively by the scientific community for phylogenetic analysis and molecular probe designing, has substantially extended the functionality of ARB software suite with 3D environment. Results Three-dimensional structure of rRNA is visualized in OpenGL 3D environment with the abilities to change the display and overlay information onto the molecule, dynamically. Phylogenetic information derived from the multiple sequence alignments can be overlaid onto the molecule structure in a real time. Superimposition of both statistical and non-statistical sequence associated information onto the rRNA 3D structure can be done using customizable color scheme, which is also applied to a textual sequence alignment for reference. Oligonucleotide probes designed by ARB probe design tools can be mapped onto the 3D structure along with the probe accessibility models for evaluation with respect to secondary and tertiary structural conformations of rRNA. Conclusion Visualization of three-dimensional structure of rRNA in an intuitive display provides the biologists with the greater possibilities to carry out structure based phylogenetic analysis. Coupled with secondary structure models of rRNA, RNA3D program aids in validating the sequence alignments of rRNA genes and evaluating

  15. Institutional analysis of incentive schemes for ecosystem service provision - a comparative study across four European countries

    DEFF Research Database (Denmark)

    Prokofieva, Irina; Górriz, Elena; Boon, Tove Enggrob

    2014-01-01

    Incentive schemes and payments for ecosystem services attract increasing attention as a means for aligning the interests of landowners and society by remunerating forest owners for the goods and services their forests produce. As incentive schemes expand around the world, questions related...... and Italy. The analysed schemes are predominantly aimed at enhancing biodiversity and improving recreation. One of the schemes is also related to preserving a variety of forest ecosystem services from forest fires. The incentive schemes are studied following a framework for the institutional analysis of PES...... developed by Prokofieva and Gorriz (Prokofieva, I. and Gorriz, E. 2013: Institutional analysis of incentives for the provision of forest goods and services: an assessment of incentive schemes in Catalonia (North-East Spain), Forest Policy and Economics, 37, 104-114.). We focus on actor and institutional...

  16. Galaxy alignments: Theory, modelling and simulations

    CERN Document Server

    Kiessling, Alina; Joachimi, Benjamin; Kirk, Donnacha; Kitching, Thomas D; Leonard, Adrienne; Mandelbaum, Rachel; Schäfer, Björn Malte; Sifón, Cristóbal; Brown, Michael L; Rassat, Anais

    2015-01-01

    The shapes of galaxies are not randomly oriented on the sky. During the galaxy formation and evolution process, environment has a strong influence, as tidal gravitational fields in large-scale structure tend to align the shapes and angular momenta of nearby galaxies. Additionally, events such as galaxy mergers affect the relative alignments of galaxies throughout their history. These "intrinsic galaxy alignments" are known to exist, but are still poorly understood. This review will offer a pedagogical introduction to the current theories that describe intrinsic galaxy alignments, including the apparent difference in intrinsic alignment between early- and late-type galaxies and the latest efforts to model them analytically. It will then describe the ongoing efforts to simulate intrinsic alignments using both $N$-body and hydrodynamic simulations. Due to the relative youth of this field, there is still much to be done to understand intrinsic galaxy alignments and this review summarises the current state of the ...

  17. Alignment method for solar collector arrays

    Science.gov (United States)

    Driver, Jr., Richard B

    2012-10-23

    The present invention is directed to an improved method for establishing camera fixture location for aligning mirrors on a solar collector array (SCA) comprising multiple mirror modules. The method aligns the mirrors on a module by comparing the location of the receiver image in photographs with the predicted theoretical receiver image location. To accurately align an entire SCA, a common reference is used for all of the individual module images within the SCA. The improved method can use relative pixel location information in digital photographs along with alignment fixture inclinometer data to calculate relative locations of the fixture between modules. The absolute locations are determined by minimizing alignment asymmetry for the SCA. The method inherently aligns all of the mirrors in an SCA to the receiver, even with receiver position and module-to-module alignment errors.

  18. Shafting Alignment Computing Method of New Multibearing Rotor System under Specific Installation Requirement

    Directory of Open Access Journals (Sweden)

    Qian Chen

    2016-01-01

    Full Text Available The shafting of large steam turbine generator set is composed of several rotors which are connected by couplings. The computing method of shafting with different structure under specific installation requirement is studied in this paper. Based on three-moment equation, shafting alignment mathematical model is established. The computing method of bearing elevations and loads under corresponding installation requirements, where bending moment of each coupling is zero and there exist preset sag and gap in some couplings, is proposed, respectively. Bearing elevations and loads of shafting with different structure under specific installation requirement are calculated; calculation results are compared with installation data measured on site which verifies the validity and accuracy of the proposed shafting alignment computing method. The above work provides a reliable approach to analyze shafting alignment and could guide installation on site.

  19. Pupil Alignment Measuring Technique and Alignment Reference for Instruments or Optical Systems

    Science.gov (United States)

    Hagopian, John G.

    2010-01-01

    A technique was created to measure the pupil alignment of instruments in situ by measuring calibrated pupil alignment references (PARs) in instruments. The PAR can also be measured using an alignment telescope or an imaging system. PAR allows the verification of the science instrument (SI) pupil alignment at the integrated science instrument module (ISIM) level of assembly at ambient and cryogenic operating temperature. This will allow verification of the ISIM+SI alignment, and provide feedback to realign the SI if necessary.

  20. Aligned interactions in cosmic rays

    Energy Technology Data Exchange (ETDEWEB)

    Kempa, J., E-mail: kempa@pw.plock.pl [Warsaw University of Technology Branch Plock (Poland)

    2015-12-15

    The first clean Centauro was found in cosmic rays years many ago at Mt Chacaltaya experiment. Since that time, many people have tried to find this type of interaction, both in cosmic rays and at accelerators. But no one has found a clean cases of this type of interaction.It happened finally in the last exposure of emulsion at Mt Chacaltaya where the second clean Centauro has been found. The experimental data for both the Centauros and STRANA will be presented and discussed in this paper. We also present our comments to the intriguing question of the existence of a type of nuclear interactions at high energy with alignment.

  1. MEANS FOR DETERMINING CENTRIFUGE ALIGNMENT

    Science.gov (United States)

    Smith, W.Q.

    1958-08-26

    An apparatus is presented for remotely determining the alignment of a centrifuge. The centrifage shaft is provided with a shoulder, upon which two followers ride, one for detecting radial movements, and one upon the shoulder face for determining the axial motion. The followers are attached to separate liquid filled bellows, and a tube connects each bellows to its respective indicating gage at a remote location. Vibrations produced by misalignment of the centrifuge shaft are transmitted to the bellows, and tbence through the tubing to the indicator gage. This apparatus is particularly useful for operation in a hot cell where the materials handled are dangerous to the operating personnel.

  2. Two Types of Coupling Integrable Couplings of the S-mKdV Hierarchy

    Institute of Scientific and Technical Information of China (English)

    WEI Yuan; ZHANG Yu-Feng

    2011-01-01

    Firstly 4 Lie algebras are constructed. Then applications of the loop algebra are presented to obtain two types of coupling integrable couplings of the S-mKdV hierarchy by using Tu scheme. The coupling integrable couplings of the S-mKdV hierarchy obtained in the paper reduce to the coupling integrable couplings of the mKdV equation and the coupling integrable couplings of the nonlinear schr(o)dinger equation respectively. The method given in the paper can be used to other hierarchies generally.

  3. An efficient compression scheme for bitmap indices

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Kesheng; Otoo, Ekow J.; Shoshani, Arie

    2004-04-13

    When using an out-of-core indexing method to answer a query, it is generally assumed that the I/O cost dominates the overall query response time. Because of this, most research on indexing methods concentrate on reducing the sizes of indices. For bitmap indices, compression has been used for this purpose. However, in most cases, operations on these compressed bitmaps, mostly bitwise logical operations such as AND, OR, and NOT, spend more time in CPU than in I/O. To speedup these operations, a number of specialized bitmap compression schemes have been developed; the best known of which is the byte-aligned bitmap code (BBC). They are usually faster in performing logical operations than the general purpose compression schemes, but, the time spent in CPU still dominates the total query response time. To reduce the query response time, we designed a CPU-friendly scheme named the word-aligned hybrid (WAH) code. In this paper, we prove that the sizes of WAH compressed bitmap indices are about two words per row for large range of attributes. This size is smaller than typical sizes of commonly used indices, such as a B-tree. Therefore, WAH compressed indices are not only appropriate for low cardinality attributes but also for high cardinality attributes.In the worst case, the time to operate on compressed bitmaps is proportional to the total size of the bitmaps involved. The total size of the bitmaps required to answer a query on one attribute is proportional to the number of hits. These indicate that WAH compressed bitmap indices are optimal. To verify their effectiveness, we generated bitmap indices for four different datasets and measured the response time of many range queries. Tests confirm that sizes of compressed bitmap indices are indeed smaller than B-tree indices, and query processing with WAH compressed indices is much faster than with BBC compressed indices, projection indices and B-tree indices. In addition, we also verified that the average query response time

  4. New technology developments make passive laser/fiber alignment a reality

    Science.gov (United States)

    Collins, John V.; MacDonald, Brian M.; Lealman, I. F.; Jones, C. A.

    1996-01-01

    In this paper we report on the combination of a precision cleaved large spot laser and a silicon micromachined optical bench to achieve high coupling efficiencies by purely passive alignment. Coupling efficiencies of over 50% have been obtained by passively aligning precision cleaved large spot sized lasers to singlemode fiber on a silicon micromachined substrate. This is the highest known coupling figure reported for passive alignment. The packaging of semiconductor laser chips has always presented a range of technical problems due to the sub-micron tolerances required to obtain optimum coupling of the small laser spot size to the larger spot size of a singlemode fiber. Lasers have been developed that can ease these tolerances by matching the laser spot size to that of cleaved fiber. This is achieved by tapering the active layer to adiabatically expand the laser mode size. A method of controlling the physical size of laser diode chips to sub-micron accuracy has enabled these lasers to be bonded against substantial alignment features on a silicon micro-engineered optical bench which also includes a V-groove into which a cleaved single-mode optical fiber can be fixed. Results are also discussed for an alternative ferrule-based, non-hermetic laser packaging design which utilizes the relaxed alignment tolerances of the large spot lasers to give simple package assembly suitable for automation. Both of the packaging technologies discussed offer a viable route to obtaining the very low cost optoelectronic components required for fiber to the home networks.

  5. Pretzel scheme for CEPC

    Science.gov (United States)

    Geng, Huiping

    2016-11-01

    CEPC was proposed as an electron and positron collider ring with a circumference of 50-100 km to study the Higgs boson. Since the proposal was made, the lattice design for CEPC has been carried out and a preliminary conceptual design report has been written at the end of 2014. In this paper, we will describe the principles of pretzel scheme design, which is one of most important issues in CEPC lattice design. Then, we will show the modification of the lattice based on the lattice design shown in the Pre-CDR. The latest pretzel orbit design result will also be shown. The issues remained to be solved in the present design will be discussed and a brief summary will be given at the end.

  6. Cosmological SUSY Breaking and the Pyramid Schemes

    CERN Document Server

    Banks, T

    2014-01-01

    I review the ideas of holographic space-time (HST), Cosmological SUSY breaking (CSB), and the Pyramid Schemes, which are the only known models of Tera-scale physics consistent with CSB, current particle data, and gauge coupling unification. There is considerable uncertainty in the estimate of the masses of supersymmetric partners of the standard model particles, but the model predicts that the gluino is probably out of reach of the LHC, squarks may be in reach, and the NLSP is a right handed slepton, which should be discovered soon.

  7. Field-aligned-impedance-transforming ICRF antenna in the LHD

    Energy Technology Data Exchange (ETDEWEB)

    Saito, K., E-mail: saito@nifs.ac.jp; Seki, T.; Kasahara, H.; Seki, R.; Kamio, S.; Nomura, G.; Mutoh, T.

    2015-10-15

    Newly developed ion cyclotron range of frequencies (ICRF) antennas were fabricated and installed in the Large Helical Device (LHD). The antennas, called field-aligned-impedance-transforming (FAIT) antennas, were designed based on former handshake form (HAS) antennas for high power and steady-state operation. The FAIT antennas demonstrated higher loading resistance and lower temperature on ceramic feed-through than HAS antennas. Antenna impedance and injected power were measured precisely using a directional coupler installed between the impedance matching device and antenna. It was shown that an injection power of 1.8 MW or a power density of 15 MW/m{sup 2} would be possible for short-pulse discharges. The mutual coupling between two FAIT antennas is small enough, since any current phase is possible without adjusting the impedance matching device. Although the FAIT antennas are aligned in a poloidal direction, a high heating efficiency of 85% was achieved with the proper minority concentration ratio.

  8. Velocity-aligned Doppler spectroscopy

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Z.; Koplitz, B.; Wittig, C.

    1989-03-01

    The technique of velocity-aligned Doppler spectrosocopy (VADS) is presented and discussed. For photolysis/probe experiments with pulsed initiation, VADS can yield Doppler profiles for nascent photofragments that allow detailed center-of-mass (c.m.) kinetic energy distributions to be extracted. When compared with traditional forms of Doppler spectroscopy, the improvement in kinetic energy resolution is dramatic. Changes in the measured profiles are a consequence of spatial discrimination (i.e., focused and overlapping photolysis and probe beams) and delayed observation. These factors result in the selective detection of species whose velocities are aligned with the wave vector of the probe radiation k/sub pr/, thus revealing the speed distribution along k/sub pr/ rather than the distribution of nascent velocity components projected upon this direction. Mathematical details of the procedure used to model VADS are given, and experimental illustrations for HI, H/sub 2/S, and NH/sub 3/ photodissociation are presented. In these examples, pulsed photodissociation produces H atoms that are detected by sequential two-photon, two-frequency ionization via Lyman-..cap alpha.. with a pulsed laser (121.6+364.7 nm), and measuring the Lyman-..cap alpha.. Doppler profile as a function of probe delay reveals both internal and c.m. kinetic energy distributions for the photofragments. Strengths and weaknesses of VADS as a tool for investigating photofragmentation phenomena are also discussed.

  9. Multiple sequence alignment accuracy and phylogenetic inference.

    Science.gov (United States)

    Ogden, T Heath; Rosenberg, Michael S

    2006-04-01

    Phylogenies are often thought to be more dependent upon the specifics of the sequence alignment rather than on the method of reconstruction. Simulation of sequences containing insertion and deletion events was performed in order to determine the role that alignment accuracy plays during phylogenetic inference. Data sets were simulated for pectinate, balanced, and random tree shapes under different conditions (ultrametric equal branch length, ultrametric random branch length, nonultrametric random branch length). Comparisons between hypothesized alignments and true alignments enabled determination of two measures of alignment accuracy, that of the total data set and that of individual branches. In general, our results indicate that as alignment error increases, topological accuracy decreases. This trend was much more pronounced for data sets derived from more pectinate topologies. In contrast, for balanced, ultrametric, equal branch length tree shapes, alignment inaccuracy had little average effect on tree reconstruction. These conclusions are based on average trends of many analyses under different conditions, and any one specific analysis, independent of the alignment accuracy, may recover very accurate or inaccurate topologies. Maximum likelihood and Bayesian, in general, outperformed neighbor joining and maximum parsimony in terms of tree reconstruction accuracy. Results also indicated that as the length of the branch and of the neighboring branches increase, alignment accuracy decreases, and the length of the neighboring branches is the major factor in topological accuracy. Thus, multiple-sequence alignment can be an important factor in downstream effects on topological reconstruction.

  10. Galaxy alignment on large and small scales

    Science.gov (United States)

    Kang, X.; Lin, W. P.; Dong, X.; Wang, Y. O.; Dutton, A.; Macciò, A.

    2016-10-01

    Galaxies are not randomly distributed across the universe but showing different kinds of alignment on different scales. On small scales satellite galaxies have a tendency to distribute along the major axis of the central galaxy, with dependence on galaxy properties that both red satellites and centrals have stronger alignment than their blue counterparts. On large scales, it is found that the major axes of Luminous Red Galaxies (LRGs) have correlation up to 30Mpc/h. Using hydro-dynamical simulation with star formation, we investigate the origin of galaxy alignment on different scales. It is found that most red satellite galaxies stay in the inner region of dark matter halo inside which the shape of central galaxy is well aligned with the dark matter distribution. Red centrals have stronger alignment than blue ones as they live in massive haloes and the central galaxy-halo alignment increases with halo mass. On large scales, the alignment of LRGs is also from the galaxy-halo shape correlation, but with some extent of mis-alignment. The massive haloes have stronger alignment than haloes in filament which connect massive haloes. This is contrary to the naive expectation that cosmic filament is the cause of halo alignment.

  11. Aptaligner: automated software for aligning pseudorandom DNA X-aptamers from next-generation sequencing data.

    Science.gov (United States)

    Lu, Emily; Elizondo-Riojas, Miguel-Angel; Chang, Jeffrey T; Volk, David E

    2014-06-10

    Next-generation sequencing results from bead-based aptamer libraries have demonstrated that traditional DNA/RNA alignment software is insufficient. This is particularly true for X-aptamers containing specialty bases (W, X, Y, Z, ...) that are identified by special encoding. Thus, we sought an automated program that uses the inherent design scheme of bead-based X-aptamers to create a hypothetical reference library and Markov modeling techniques to provide improved alignments. Aptaligner provides this feature as well as length error and noise level cutoff features, is parallelized to run on multiple central processing units (cores), and sorts sequences from a single chip into projects and subprojects.

  12. Indoor localization using unsupervised manifold alignment with geometry perturbation

    KAUST Repository

    Majeed, Khaqan

    2014-04-01

    The main limitation of deploying/updating Received Signal Strength (RSS) based indoor localization is the construction of fingerprinted radio map, which is quite a hectic and time-consuming process especially when the indoor area is enormous and/or dynamic. Different approaches have been undertaken to reduce such deployment/update efforts, but the performance degrades when the fingerprinting load is reduced below a certain level. In this paper, we propose an indoor localization scheme that requires as low as 1% fingerprinting load. This scheme employs unsupervised manifold alignment that takes crowd sourced RSS readings and localization requests as source data set and the environment\\'s plan coordinates as destination data set. The 1% fingerprinting load is only used to perturb the local geometries in the destination data set. Our proposed algorithm was shown to achieve less than 5 m mean localization error with 1% fingerprinting load and a limited number of crowd sourced readings, when other learning based localization schemes pass the 10 m mean error with the same information.

  13. Improved Ternary Subdivision Interpolation Scheme

    Institute of Scientific and Technical Information of China (English)

    WANG Huawei; QIN Kaihuai

    2005-01-01

    An improved ternary subdivision interpolation scheme was developed for computer graphics applications that can manipulate open control polygons unlike the previous ternary scheme, with the resulting curve proved to be still C2-continuous. Parameterizations of the limit curve near the two endpoints are given with expressions for the boundary derivatives. The split joint problem is handled with the interpolating ternary subdivision scheme. The improved scheme can be used for modeling interpolation curves in computer aided geometric design systems, and provides a method for joining two limit curves of interpolating ternary subdivisions.

  14. Formal Verification of NTRUEncrypt Scheme

    Directory of Open Access Journals (Sweden)

    Gholam Reza Moghissi

    2016-04-01

    Full Text Available In this paper we explore a mechanized verification of the NTRUEncrypt scheme, with the formal proof system Isabelle/HOL. More precisely, the functional correctness of this algorithm, in its reduced form, is formally verified with computer support. We show that this scheme is correct what is a necessary condition for the usefulness of any cryptographic encryption scheme. Besides, we present a convenient and application specific formalization of the NTRUEncrypt scheme in the Isabelle/HOL system that can be used in further study around the functional and security analysis of NTRUEncrypt family.

  15. Interference alignment for degrees of freedom improvement in 3-relay half-duplex systems

    KAUST Repository

    Park, Seongho

    2011-12-01

    In a half-duplex relaying, the capacity pre-log factor is a major drawback in spectral efficiency. This paper proposes a linear precoding scheme and an alternate relaying protocol in a dual-hop half-duplex system where three relays help the communication between the source and the destination. In our proposed scheme, we consider a phase incoherent method in relays in which the source alternately transmits message signals to the different relays. In addition, we propose a linear interference alignment scheme which can eliminate the inter-relay interference resulted from the phase incoherence of relaying. Based on our analysis of degrees of freedom and our simulation results, we show that our proposed scheme achieves additional degrees of freedom compared to the conventional half-duplex relaying. © 2011 IEEE.

  16. Alternate transmission relaying based on interference alignment in 3-relay half-duplex MIMO systems

    KAUST Repository

    Park, Seongho

    2012-09-01

    In a half-duplex relaying, the capacity pre-log factor 1/2 is a major drawback in spectral efficiency. This paper proposes a linear precoding/decoding scheme and an alternate relaying protocol in a dual-hop half-duplex system where three relays help the communication between the source and the destination. In our proposed scheme, we consider a phase incoherent method in relays in which the source alternately transmits message signals to the different relays. In addition, we propose a linear interference alignment scheme which can suppress the inter-relay interference resulting from the phase incoherence of relaying. Based on our analysis of degrees of freedom and our simulation results, we show that our proposed scheme achieves additional degrees of freedom compared to the conventional half-duplex relaying. © 2012 IEEE.

  17. Exploiting Interference Alignment in Multi-Cell Cooperative OFDMA Resource Allocation

    CERN Document Server

    Da, Bin

    2011-01-01

    This paper studies interference alignment (IA) based multi-cell cooperative resource allocation for the downlink OFDMA with universal frequency reuse. Unlike the traditional scheme that treats subcarriers as separate dimensions for resource allocation, the IA technique is utilized to enable frequency-domain precoding over parallel subcarriers. In this paper, the joint optimization of frequency-domain precoding via IA, subcarrier user selection and power allocation is investigated for a cooperative three-cell OFDMA system to maximize the downlink throughput. Numerical results for a simplified symmetric channel setup reveal that the IA-based scheme achieves notable throughput gains over the traditional scheme only when the inter-cell interference link has a comparable strength as the direct link, and the receiver SNR is sufficiently large. Motivated by this observation, a practical hybrid scheme is proposed for cellular systems with heterogenous channel conditions, where the total spectrum is divided into two s...

  18. Galaxy alignments: Observations and impact on cosmology

    CERN Document Server

    Kirk, Donnacha; Hoekstra, Henk; Joachimi, Benjamin; Kitching, Thomas D; Mandelbaum, Rachel; Sifón, Cristóbal; Cacciato, Marcello; Choi, Ami; Kiessling, Alina; Leonard, Adrienne; Rassat, Anais; Schäfer, Björn Malte

    2015-01-01

    Galaxy shapes are not randomly oriented, rather they are statistically aligned in a way that can depend on formation environment, history and galaxy type. Studying the alignment of galaxies can therefore deliver important information about the astrophysics of galaxy formation and evolution as well as the growth of structure in the Universe. In this review paper we summarise key measurements of intrinsic alignments, divided by galaxy type, scale and environment. We also cover the statistics and formalism necessary to understand the observations in the literature. With the emergence of weak gravitational lensing as a precision probe of cosmology, galaxy alignments took on an added importance because they can mimic cosmic shear, the effect of gravitational lensing by large-scale structure on observed galaxy shapes. This makes intrinsic alignments an important systematic effect in weak lensing studies. We quantify the impact of intrinsic alignments on cosmic shear surveys and finish by reviewing practical mitigat...

  19. Magnetic alignment and patterning of cellulose fibers

    Directory of Open Access Journals (Sweden)

    Fumiko Kimura and Tsunehisa Kimura

    2008-01-01

    Full Text Available The alignment and patterning of cellulose fibers under magnetic fields are reported. Static and rotating magnetic fields were used to align cellulose fibers with sizes ranging from millimeter to nanometer sizes. Cellulose fibers of the millimeter order, which were prepared for papermaking, and much smaller fibers with micrometer to nanometer sizes prepared by the acid hydrolysis of larger ones underwent magnetic alignment. Under a rotating field, a uniaxial alignment of fibers was achieved. The alignment was successfully fixed by the photopolymerization of a UV-curable resin precursor used as matrix. A monodomain chiral nematic film was prepared from an aqueous suspension of nanofibers. Using a field modulator inserted in a homogeneous magnetic field, simultaneous alignment and patterning were achieved

  20. Magnetic alignment and patterning of cellulose fibers

    Energy Technology Data Exchange (ETDEWEB)

    Kimura, Fumiko; Kimura, Tsunehisa [Division of Forest and Biomaterials Science, Graduate School of Agriculture, Kyoto University, Kitashirakawa, Sakyo-ku, Kyoto 606-8502 (Japan)], E-mail: tkimura@kais.kyoto-u.ac.jp

    2008-04-01

    The alignment and patterning of cellulose fibers under magnetic fields are reported. Static and rotating magnetic fields were used to align cellulose fibers with sizes ranging from millimeter to nanometer sizes. Cellulose fibers of the millimeter order, which were prepared for papermaking, and much smaller fibers with micrometer to nanometer sizes prepared by the acid hydrolysis of larger ones underwent magnetic alignment. Under a rotating field, a uniaxial alignment of fibers was achieved. The alignment was successfully fixed by the photopolymerization of a UV-curable resin precursor used as matrix. A monodomain chiral nematic film was prepared from an aqueous suspension of nanofibers. Using a field modulator inserted in a homogeneous magnetic field, simultaneous alignment and patterning were achieved.

  1. Velocity-aligned Doppler spectroscopy

    Science.gov (United States)

    Xu, Z.; Koplitz, B.; Wittig, C.

    1989-03-01

    The use of velocity-aligned Doppler spectroscopy (VADS) to measure center-of-mass kinetic-energy distributions of nascent photofragments produced in pulsed-initiation photolysis/probe experiments is described and demonstrated. In VADS, pulsed photolysis and probe laser beams counterpropagate through the ionization region of a time-of-flight mass spectrometer. The theoretical principles of VADS and the mathematical interpretation of VADS data are explained and illustrated with diagrams; the experimental setup is described; and results for the photodissociation of HI, H2S, and NH3 are presented in graphs and characterized in detail. VADS is shown to give much higher kinetic-energy resolution than conventional Doppler spectroscopy.

  2. Aligned carbon nanotubes for nanoelectronics

    Science.gov (United States)

    Choi, Won Bong; Bae, Eunju; Kang, Donghun; Chae, Soodoo; Cheong, Byung-ho; Ko, Ju-hye; Lee, Eungmin; Park, Wanjun

    2004-10-01

    We discuss the central issues to be addressed for realizing carbon nanotube (CNT) nanoelectronics. We focus on selective growth, electron energy bandgap engineering and device integration. We have introduced a nanotemplate to control the selective growth, length and diameter of CNTs. Vertically aligned CNTs are synthesized for developing a vertical CNT-field effect transistor (FET). The ohmic contact of the CNT/metal interface is formed by rapid thermal annealing. Diameter control, synthesis of Y-shaped CNTs and surface modification of CNTs open up the possibility for energy bandgap modulation. The concepts of an ultra-high density transistor based on the vertical-CNT array and a nonvolatile memory based on the top gate structure with an oxide-nitride-oxide charge trap are also presented. We suggest that the deposited memory film can be used for the quantum dot storage due to the localized electric field created by a nano scale CNT-electron channel.

  3. Microwave Emission from Aligned Dust

    CERN Document Server

    Lazarian, A

    2003-01-01

    Polarized microwave emission from dust is an important foreground that may contaminate polarized CMB studies unless carefully accounted for. We discuss potential difficulties associated with this foreground, namely, the existence of different grain populations with very different emission/polarization properties and variations of the polarization yield with grain temperature. In particular, we discuss observational evidence in favor of rotational emission from tiny PAH particles with dipole moments, i.e. ``spinning dust'', and also consider magneto-dipole emission from strongly magnetized grains. We argue that in terms of polarization, the magneto-dipole emission may dominate even if its contribution to total emissivity is subdominant. Addressing polarized emission at frequencies larger than approsimately 100 GHz, we discuss the complications arising from the existence of dust components with different temperatures and possibly different alignment properties.

  4. AUTISTIC CHILDREN PROTECTION SCHEME

    Directory of Open Access Journals (Sweden)

    Dragan LUKIC

    1998-09-01

    Full Text Available The present article sets forth the theoretical grounds which make the basis for the organizational scheme of the autistic persons social protection. This protection consists of the below listed forms of work:· Health service with the role of an early detection and participation in the creation of rehabilitation programs;· Social protection with its programs of work from the diagnostics where the defectologist makes a team together with the physician and the psychologists to the systems of rehabilitation institutions where the defectologist’s is the main responsibility.The present article underlines two facts, namely:· that an autistic person requires to be followed and every spare moment used to promote and advance the activities the doer commenced himself instead of having him carry out the programs which are beyond his internal motivations and which he finds emotionally inaccessible;· that and form of work organization with autistic persons must subordinate its administrative part to the basic professional requirements this kind of disorder (handicap sets in front of each professional.

  5. Multilingual alignments by monolingual string differences

    OpenAIRE

    Lardilleux, Adrien; Lepage, Yves

    2008-01-01

    International audience; We propose a method to obtain subsentential alignments from several languages simultaneously. The method handles several languages at once, and avoids the complexity explosion due to the usual pair-by-pair processing. It can be used for different units (characters, morphemes, words, chunks). An evaluation of word alignments with a trilingual machine translation corpus has been conducted. A comparison of the results with those obtained by state of the art alignment soft...

  6. COS to FGS Alignment {NUV}

    Science.gov (United States)

    Hartig, George

    2009-07-01

    DESCRIPTION: In order to determine the location of the COS reference frame with respect to the FGS reference frames, NUV MIRRORA images will be obtained of an astrometric target and field. Astrometric guide stars and targets must be employed for this activity in order to facilitate the alignment wth the FGS. Images will be obtained at the initial pointing and at positions offset in V2 and in V3. Starting with the original blind pointing, obtain MIRRORA image exposures in a 5x5 POS-TARG grid centered on initial pointing; repeat the image sequence at two bracketing focus positions in same visit. Following completion of third pattern, return to nominal focus and perform 5x5 ACQ/SEARCH target acquisition and obtain one TIME-TAG MIRRORA image and one ACCUM verification exposure. Next perform an ACQ/IMAGE target acquisition followed by an ACCUM verification exposure. Also obtain ACCUM verification exposure for each of the two alternate focus positions used previously. Using MIRRORB obtain ACCUM confirmation image at nominal focus and ACCUM images at alternate focus positions and then perform an ACQ/IMAGE and confirming image at nominal focus. Analyze imagery, uplink pointing offset as offset 11469A and adjust nominal focus via patchable constant uplinked with subsequent visit of this program; update aperture locations via modified SIAF file uplinked with subsequent SMS. Use updated focus and offset pointing as input for COS 09 {program 11469 - NUV Optics Alignment and Focus} {note the SIAF update is not a prerequisite for COS 09 to proceed, but the pointing offset and focus update are}.

  7. A standard numbering scheme for thiamine diphosphate-dependent decarboxylases

    Directory of Open Access Journals (Sweden)

    Vogel Constantin

    2012-11-01

    positions in the superfamily of ThDP-dependent decarboxylases. Conclusions The numbering scheme serves as a tool for the reliable sequence alignment of ThDP-dependent decarboxylases and the unambiguous identification and communication of corresponding positions. Thus, it is the basis for the systematic and automated analysis of sequence-encoded properties such as structural and functional relevance of amino acid positions, because the analysis of conserved positions, the identification of correlated mutations and the determination of subfamily specific amino acid distributions depend on reliable multisequence alignments and the unambiguous identification of the alignment columns. The method is reliable and robust and can easily be adapted to further protein families.

  8. Some aspects of SR beamline alignment

    Energy Technology Data Exchange (ETDEWEB)

    Gaponov, Yu.A., E-mail: Yury.Gaponov@maxlab.lu.se [MAX-lab, Lund University, P.O.B. 118, SE-221 00 Lund (Sweden); Cerenius, Y. [MAX-lab, Lund University, P.O.B. 118, SE-221 00 Lund (Sweden); Nygaard, J. [Faculty of Life Sciences, University of Copenhagen, DK-1871 Frederiksberg C (Denmark); Ursby, T.; Larsson, K. [MAX-lab, Lund University, P.O.B. 118, SE-221 00 Lund (Sweden)

    2011-09-01

    Based on the Synchrotron Radiation (SR) beamline optical element-by-element alignment with analysis of the alignment results an optimized beamline alignment algorithm has been designed and developed. The alignment procedures have been designed and developed for the MAX-lab I911-4 fixed energy beamline. It has been shown that the intermediate information received during the monochromator alignment stage can be used for the correction of both monochromator and mirror without the next stages of alignment of mirror, slits, sample holder, etc. Such an optimization of the beamline alignment procedures decreases the time necessary for the alignment and becomes useful and helpful in the case of any instability of the beamline optical elements, storage ring electron orbit or the wiggler insertion device, which could result in the instability of angular and positional parameters of the SR beam. A general purpose software package for manual, semi-automatic and automatic SR beamline alignment has been designed and developed using the developed algorithm. The TANGO control system is used as the middle-ware between the stand-alone beamline control applications BLTools, BPMonitor and the beamline equipment.

  9. The twilight zone of cis element alignments.

    Science.gov (United States)

    Sebastian, Alvaro; Contreras-Moreira, Bruno

    2013-02-01

    Sequence alignment of proteins and nucleic acids is a routine task in bioinformatics. Although the comparison of complete peptides, genes or genomes can be undertaken with a great variety of tools, the alignment of short DNA sequences and motifs entails pitfalls that have not been fully addressed yet. Here we confront the structural superposition of transcription factors with the sequence alignment of their recognized cis elements. Our goals are (i) to test TFcompare (http://floresta.eead.csic.es/tfcompare), a structural alignment method for protein-DNA complexes; (ii) to benchmark the pairwise alignment of regulatory elements; (iii) to define the confidence limits and the twilight zone of such alignments and (iv) to evaluate the relevance of these thresholds with elements obtained experimentally. We find that the structure of cis elements and protein-DNA interfaces is significantly more conserved than their sequence and measures how this correlates with alignment errors when only sequence information is considered. Our results confirm that DNA motifs in the form of matrices produce better alignments than individual sequences. Finally, we report that empirical and theoretically derived twilight thresholds are useful for estimating the natural plasticity of regulatory sequences, and hence for filtering out unreliable alignments.

  10. The art of editing RNA structural alignments

    DEFF Research Database (Denmark)

    Andersen, Ebbe Sloth

    2014-01-01

    Manual editing of RNA structural alignments may be considered more art than science, since it still requires an expert biologist to take multiple levels of information into account and be slightly creative when constructing high-quality alignments. Even though the task is rather tedious, it is re......Manual editing of RNA structural alignments may be considered more art than science, since it still requires an expert biologist to take multiple levels of information into account and be slightly creative when constructing high-quality alignments. Even though the task is rather tedious...

  11. Open microwave cavity for use in a Purcell enhancement cooling scheme

    Science.gov (United States)

    Evetts, N.; Martens, I.; Bizzotto, D.; Longuevergne, D.; Hardy, W. N.

    2016-10-01

    A microwave cavity is described which can be used to cool lepton plasmas for potential use in synthesis of antihydrogen. The cooling scheme is an incarnation of the Purcell effect: when plasmas are coupled to a microwave cavity, the plasma cooling rate is resonantly enhanced through increased spontaneous emission of cyclotron radiation. The cavity forms a three electrode section of a Penning-Malmberg trap and has a bulged cylindrical geometry with open ends aligned with the magnetic trapping axis. This allows plasmas to be injected and removed from the cavity without the need for moving parts while maintaining high quality factors for resonant modes. The cavity includes unique surface preparations for adjusting the cavity quality factor and achieving anti-static shielding using thin layers of nichrome and colloidal graphite, respectively. Geometric design considerations for a cavity with strong cooling power and low equilibrium plasma temperatures are discussed. Cavities of this weak-bulge design will be applicable to many situations where an open geometry is required.

  12. Flavour alignment in physics beyond the standard model

    Energy Technology Data Exchange (ETDEWEB)

    Braeuninger, Carolin Barbara

    2012-11-21

    There are numerous reasons to think that the Standard Model of physics is not the ultimate theory of nature on very small scales. However, attempts to construct theories that go beyond the Standard Model generically lead to high rates of flavour changing neutral processes that are in conflict with experiment: Quarks are the fundamental constituents of protons and neutrons. Together with electrons they form the visible matter of the universe1. They come in three generations or ''flavours''. In interactions, quarks of different generations can mix, i.e. a quark of one flavour can transform into a quark of another flavour. In the Standard Model, at first order in perturbation theory, such processes occur only via the exchange of a charged particle. Flavour changing neutral processes can only arise in processes involving loops of charged particles. This is due to the fact that all couplings of two quarks to a neutral particle are diagonal in the basis of the mass eigenstates of the quarks. There is thus no mixing of quarks of different flavour at first order. Since the loop processes are suppressed by a loop factor, the Standard Model predicts very low rates for neutral processes that change the flavour of quarks. So far, this is in agreement with experiment. In extensions of the Standard Model, new couplings to the quarks are usually introduced. In general there is no reason why the new coupling matrices should be diagonal in the mass basis of the quarks. These models therefore predict high rates for processes that mix quarks of different flavour. Extensions of the Standard Model must therefore have a non-trivial flavour structure. A possibility to avoid flavour violation is to assume that the new couplings are aligned with the mass matrices of the quarks, i.e. diagonal in the same basis. This alignment could be due to a flavour symmetry. In this thesis, two extensions of the Standard Model with alignment are studied. The first is a simple

  13. Triangular Alignment (TAME). A Tensor-based Approach for Higher-order Network Alignment

    Energy Technology Data Exchange (ETDEWEB)

    Mohammadi, Shahin [Purdue Univ., West Lafayette, IN (United States); Gleich, David F. [Purdue Univ., West Lafayette, IN (United States); Kolda, Tamara G. [Sandia National Laboratories (SNL-CA), Livermore, CA (United States); Grama, Ananth [Purdue Univ., West Lafayette, IN (United States)

    2015-11-01

    Network alignment is an important tool with extensive applications in comparative interactomics. Traditional approaches aim to simultaneously maximize the number of conserved edges and the underlying similarity of aligned entities. We propose a novel formulation of the network alignment problem that extends topological similarity to higher-order structures and provide a new objective function that maximizes the number of aligned substructures. This objective function corresponds to an integer programming problem, which is NP-hard. Consequently, we approximate this objective function as a surrogate function whose maximization results in a tensor eigenvalue problem. Based on this formulation, we present an algorithm called Triangular AlignMEnt (TAME), which attempts to maximize the number of aligned triangles across networks. We focus on alignment of triangles because of their enrichment in complex networks; however, our formulation and resulting algorithms can be applied to general motifs. Using a case study on the NAPABench dataset, we show that TAME is capable of producing alignments with up to 99% accuracy in terms of aligned nodes. We further evaluate our method by aligning yeast and human interactomes. Our results indicate that TAME outperforms the state-of-art alignment methods both in terms of biological and topological quality of the alignments.

  14. The effects of alignment error and alignment filtering on the sitewise detection of positive selection.

    Science.gov (United States)

    Jordan, Gregory; Goldman, Nick

    2012-04-01

    When detecting positive selection in proteins, the prevalence of errors resulting from misalignment and the ability of alignment filters to mitigate such errors are not well understood, but filters are commonly applied to try to avoid false positive results. Focusing on the sitewise detection of positive selection across a wide range of divergence levels and indel rates, we performed simulation experiments to quantify the false positives and false negatives introduced by alignment error and the ability of alignment filters to improve performance. We found that some aligners led to many false positives, whereas others resulted in very few. False negatives were a problem for all aligners, increasing with sequence divergence. Of the aligners tested, PRANK's codon-based alignments consistently performed the best and ClustalW performed the worst. Of the filters tested, GUIDANCE performed the best and Gblocks performed the worst. Although some filters showed good ability to reduce the error rates from ClustalW and MAFFT alignments, none were found to substantially improve the performance of PRANK alignments under most conditions. Our results revealed distinct trends in error rates and power levels for aligners and filters within a biologically plausible parameter space. With the best aligner, a low false positive rate was maintained even with extremely divergent indel-prone sequences. Controls using the true alignment and an optimal filtering method suggested that performance improvements could be gained by improving aligners or filters to reduce the prevalence of false negatives, especially at higher divergence levels and indel rates.

  15. Design and Test of Object Aligning Grippers for Industrial Applications

    DEFF Research Database (Denmark)

    Ellekilde, Lars-Peter; Petersen, Henrik Gordon

    2006-01-01

    In this paper we will present a new concept for gripping objects in industrial applications. We assume that a priori, the object pose is only known with a relative low accuracy. Despite this, our method can lead to high accuracy gripping suitable for e.g. industrial assembly. Our concept...... is to augment a simple parallel gripper by mounting a set of object speci?c jaws. Given the right shapes these jaws enable the gripper to automatically align the object, and thereby compensate for errors in the original object pose estimation. We will introduce a couple of automatic and semi-automatic design...

  16. Projective synchronization of chaotic systems with bidirectional nonlinear coupling

    Indian Academy of Sciences (India)

    Mohammada Ali Khan; Swarup Poria

    2013-09-01

    This paper presents a new scheme for constructing bidirectional nonlinear coupled chaotic systems which synchronize projectively. Conditions necessary for projective synchronization (PS) of two bidirectionally coupled chaotic systems are derived using Lyapunov stability theory. The proposed PS scheme is discussed by taking as examples the so-called unified chaotic model, the Lorenz–Stenflo system and the nonautonomous chaotic Van der Pol oscillator. Numerical simulation results are presented to show the efficiency of the proposed synchronization scheme.

  17. Controllable coupling of distributed qubits within a microtoroidal cavity network

    Science.gov (United States)

    Hu, C.; Xia, Y.; Song, J.

    2012-05-01

    We propose a scheme to control the coupling between two arbitrary atoms scattered within a quantum network composed of microtoroidal cavities linked by a ring-fibre. The atom-atom effective couplings are induced by pairing of off-resonant Raman transitions. The couplings can be arbitrarily controlled by adjusting classical fields. Compared with the previous scheme [S.B. Zheng, C.P. Yang, F. Nori, Phys. Rev. A 82, 042327 (2010)], the present scheme uses microtoroidal cavities with higher coupling efficiency than Fabry-Perot cavities. Furthermore, the scheme is not only suitable for the short-fibre limit, but also for multiple fibre modes. The added fibre modes can play a positive role, especially when the coupling rate between cavity-mode and fibre-mode is not large. In addition, a wider frequency domain of fibre modes can be used in this scheme.

  18. Homographic scheme for Riccati equation

    CERN Document Server

    Dubois, François

    2011-01-01

    In this paper we present a numerical scheme for the resolution of matrix Riccati equation, usualy used in control problems. The scheme is unconditionnaly stable and the solution is definite positive at each time step of the resolution. We prove the convergence in the scalar case and present several numerical experiments for classical test cases.

  19. Chaotic communication scheme with multiplication

    Science.gov (United States)

    Bobreshov, A. M.; Karavaev, A. A.

    2007-05-01

    A new scheme of data transmission with nonlinear admixing is described, in which the two mutually inverse operations (multiplication and division) ensure multiplicative mixing of the informative and chaotic signals that provides a potentially higher degree of security. A special feature of the proposed scheme is the absence of limitations (related to the division by zero) imposed on the types of informative signals.

  20. Differential operators and automorphism schemes

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    The ring of global differential operators of a variety is in closed and deep relation with its automorphism scheme.This relation can be applied to the study of homogeneous schemes,giving some criteria of homogeneity,a generalization of Serre-Lang theorem,and some consequences about abelian varieties.

  1. A phase-image watermarking scheme in gyrator domain using devil's vortex Fresnel lens as a phase mask

    Science.gov (United States)

    Yadav, A. K.; Vashisth, Sunanda; Singh, Hukum; Singh, Kehar

    2015-06-01

    We propose a watermarking scheme for phase images, based on the use of devil's vortex Fresnel lens (DVFL) as a phase mask. The DVFL provides much-desired parameter-rich phase masks which contribute to the enhanced security of the scheme in addition to overcoming the problem of axis alignment in the optical setup. The scheme uses gyrator transform (GT) in the input and the frequency domains to encrypt the input phase image before combining it with a host image. The scheme is validated for its efficacy, and analyzed for its sensitivity to various encryption parameters. Finally, it is examined for its robustness against occlusion and noise attacks.

  2. Multiuser Switched Diversity Scheduling Schemes

    CERN Document Server

    Shaqfeh, Mohammad; Alouini, Mohamed-Slim

    2012-01-01

    Multiuser switched-diversity scheduling schemes were recently proposed in order to overcome the heavy feedback requirements of conventional opportunistic scheduling schemes by applying a threshold-based, distributed, and ordered scheduling mechanism. The main idea behind these schemes is that slight reduction in the prospected multiuser diversity gains is an acceptable trade-off for great savings in terms of required channel-state-information feedback messages. In this work, we characterize the achievable rate region of multiuser switched diversity systems and compare it with the rate region of full feedback multiuser diversity systems. We propose also a novel proportional fair multiuser switched-based scheduling scheme and we demonstrate that it can be optimized using a practical and distributed method to obtain the feedback thresholds. We finally demonstrate by numerical examples that switched-diversity scheduling schemes operate within 0.3 bits/sec/Hz from the ultimate network capacity of full feedback sys...

  3. Scheme for Quantum Computing Immune to Decoherence

    Science.gov (United States)

    Williams, Colin; Vatan, Farrokh

    2008-01-01

    that the derivation provides explicit constructions for finding the exchange couplings in the physical basis needed to implement any arbitrary 1-qubit gate. These constructions lead to spintronic encodings of quantum logic that are more efficient than those of a previously published scheme that utilizes a universal but fixed set of gates.

  4. Bayesian coestimation of phylogeny and sequence alignment

    Directory of Open Access Journals (Sweden)

    Jensen Jens

    2005-04-01

    Full Text Available Abstract Background Two central problems in computational biology are the determination of the alignment and phylogeny of a set of biological sequences. The traditional approach to this problem is to first build a multiple alignment of these sequences, followed by a phylogenetic reconstruction step based on this multiple alignment. However, alignment and phylogenetic inference are fundamentally interdependent, and ignoring this fact leads to biased and overconfident estimations. Whether the main interest be in sequence alignment or phylogeny, a major goal of computational biology is the co-estimation of both. Results We developed a fully Bayesian Markov chain Monte Carlo method for coestimating phylogeny and sequence alignment, under the Thorne-Kishino-Felsenstein model of substitution and single nucleotide insertion-deletion (indel events. In our earlier work, we introduced a novel and efficient algorithm, termed the "indel peeling algorithm", which includes indels as phylogenetically informative evolutionary events, and resembles Felsenstein's peeling algorithm for substitutions on a phylogenetic tree. For a fixed alignment, our extension analytically integrates out both substitution and indel events within a proper statistical model, without the need for data augmentation at internal tree nodes, allowing for efficient sampling of tree topologies and edge lengths. To additionally sample multiple alignments, we here introduce an efficient partial Metropolized independence sampler for alignments, and combine these two algorithms into a fully Bayesian co-estimation procedure for the alignment and phylogeny problem. Our approach results in estimates for the posterior distribution of evolutionary rate parameters, for the maximum a-posteriori (MAP phylogenetic tree, and for the posterior decoding alignment. Estimates for the evolutionary tree and multiple alignment are augmented with confidence estimates for each node height and alignment column

  5. Alignments between galaxies, satellite systems and haloes

    Science.gov (United States)

    Shao, Shi; Cautun, Marius; Frenk, Carlos S.; Gao, Liang; Crain, Robert A.; Schaller, Matthieu; Schaye, Joop; Theuns, Tom

    2016-08-01

    The spatial distribution of the satellite populations of the Milky Way and Andromeda are puzzling in that they are nearly perpendicular to the discs of their central galaxies. To understand the origin of such configurations we study the alignment of the central galaxy, satellite system and dark matter halo in the largest of the `Evolution and Assembly of GaLaxies and their Environments' (EAGLE) simulation. We find that centrals and their satellite systems tend to be well aligned with their haloes, with a median misalignment angle of 33° in both cases. While the centrals are better aligned with the inner 10 kpc halo, the satellite systems are better aligned with the entire halo indicating that satellites preferentially trace the outer halo. The central-satellite alignment is weak (median misalignment angle of 52°) and we find that around 20 per cent of systems have a misalignment angle larger than 78°, which is the value for the Milky Way. The central-satellite alignment is a consequence of the tendency of both components to align with the dark matter halo. As a consequence, when the central is parallel to the satellite system, it also tends to be parallel to the halo. In contrast, if the central is perpendicular to the satellite system, as in the case of the Milky Way and Andromeda, then the central-halo alignment is much weaker. Dispersion-dominated (spheroidal) centrals have a stronger alignment with both their halo and their satellites than rotation-dominated (disc) centrals. We also found that the halo, the central galaxy and the satellite system tend to be aligned with the surrounding large-scale distribution of matter, with the halo being the better aligned of the three.

  6. AlignHUSH: Alignment of HMMs using structure and hydrophobicity information

    OpenAIRE

    Krishnadev Oruganty; Srinivasan Narayanaswamy

    2011-01-01

    Abstract Background Sensitive remote homology detection and accurate alignments especially in the midnight zone of sequence similarity are needed for better function annotation and structural modeling of proteins. An algorithm, AlignHUSH for HMM-HMM alignment has been developed which is capable of recognizing distantly related domain families The method uses structural information, in the form of predicted secondary structure probabilities, and hydrophobicity of amino acids to align HMMs of t...

  7. Supersymmetric QCD: Exact Results and Strong Coupling

    CERN Document Server

    Dine, Michael; Pack, Lawrence; Park, Chang-Soon; Ubaldi, Lorenzo; Wu, Weitao

    2011-01-01

    We revisit two longstanding puzzles in supersymmetric gauge theories. The first concerns the question of the holomorphy of the coupling, and related to this the possible definition of an exact (NSVZ) beta function. The second concerns instantons in pure gluodynamics, which appear to give sensible, exact results for certain correlation functions, which nonetheless differ from those obtained using systematic weak coupling expansions. For the first question, we extend an earlier proposal of Arkani-Hamed and Murayama, showing that if their regulated action is written suitably, the holomorphy of the couplings is manifest, and it is easy to determine the renormalization scheme for which the NSVZ formula holds. This scheme, however, is seen to be one of an infinite class of schemes, each leading to an exact beta function; the NSVZ scheme, while simple, is not selected by any compelling physical consideration. For the second question, we explain why the instanton computation in the pure supersymmetric gauge theory is...

  8. Self-assembly of folic acid: a chiral-aligning medium for enantiodiscrimination of organic molecules in an aqueous environment.

    Science.gov (United States)

    Lokesh; Suryaprakash, N

    2012-09-10

    Weak orienting medium: Self-assembly of alkaline salt of folic acid yielded a weak liquid-crystalline phase in an aqueous environment. This medium has the ability to discriminate enantiomers. The mesophase exists over a broad range and has the physical parameter dependent tunability of degree of alignment (see scheme).

  9. Understanding Beam Alignment in a Coherent Lidar System

    Science.gov (United States)

    Prasad, Narasimha S.; Roychoudhari, Chandrasekhar

    2015-01-01

    Optical beam alignment in a coherent lidar (or ladar) receiver system plays a critical role in optimizing its performance. Optical alignment in a coherent lidar system dictates the wavefront curvature (phase front) and Poynting vector) matching of the local oscillator beam with the incoming receiver beam on a detector. However, this alignment is often not easy to achieve and is rarely perfect. Furthermore, optical fibers are being increasingly used in coherent lidar system receivers for transporting radiation to achieve architectural elegance. Single mode fibers also require stringent mode matching for efficient light coupling. The detector response characteristics vary with the misalignment of the two pointing vectors. Misalignment can lead to increase in DC current. Also, a lens in front of the detector may exasperate phase front and Poynting vector mismatch. Non-Interaction of Waves, or the NIW property indicates the light beams do not interfere by themselves in the absence of detecting dipoles. In this paper, we will analyze the extent of misalignment on the detector specifications using pointing vectors of mixing beams in light of the NIW property.

  10. Volume visualization of multiple alignment of large genomicDNA

    Energy Technology Data Exchange (ETDEWEB)

    Shah, Nameeta; Dillard, Scott E.; Weber, Gunther H.; Hamann, Bernd

    2005-07-25

    Genomes of hundreds of species have been sequenced to date, and many more are being sequenced. As more and more sequence data sets become available, and as the challenge of comparing these massive ''billion basepair DNA sequences'' becomes substantial, so does the need for more powerful tools supporting the exploration of these data sets. Similarity score data used to compare aligned DNA sequences is inherently one-dimensional. One-dimensional (1D) representations of these data sets do not effectively utilize screen real estate. As a result, tools using 1D representations are incapable of providing informatory overview for extremely large data sets. We present a technique to arrange 1D data in 3D space to allow us to apply state-of-the-art interactive volume visualization techniques for data exploration. We demonstrate our technique using multi-millions-basepair-long aligned DNA sequence data and compare it with traditional 1D line plots. The results show that our technique is superior in providing an overview of entire data sets. Our technique, coupled with 1D line plots, results in effective multi-resolution visualization of very large aligned sequence data sets.

  11. Protein sequence alignment analysis by local covariation: coevolution statistics detect benchmark alignment errors.

    Directory of Open Access Journals (Sweden)

    Russell J Dickson

    Full Text Available The use of sequence alignments to understand protein families is ubiquitous in molecular biology. High quality alignments are difficult to build and protein alignment remains one of the largest open problems in computational biology. Misalignments can lead to inferential errors about protein structure, folding, function, phylogeny, and residue importance. Identifying alignment errors is difficult because alignments are built and validated on the same primary criteria: sequence conservation. Local covariation identifies systematic misalignments and is independent of conservation. We demonstrate an alignment curation tool, LoCo, that integrates local covariation scores with the Jalview alignment editor. Using LoCo, we illustrate how local covariation is capable of identifying alignment errors due to the reduction of positional independence in the region of misalignment. We highlight three alignments from the benchmark database, BAliBASE 3, that contain regions of high local covariation, and investigate the causes to illustrate these types of scenarios. Two alignments contain sequential and structural shifts that cause elevated local covariation. Realignment of these misaligned segments reduces local covariation; these alternative alignments are supported with structural evidence. We also show that local covariation identifies active site residues in a validated alignment of paralogous structures. Loco is available at https://sourceforge.net/projects/locoprotein/files/.

  12. RevTrans: multiple alignment of coding DNA from aligned amino acid sequences

    DEFF Research Database (Denmark)

    Wernersson, Rasmus; Pedersen, Anders Gorm

    2003-01-01

    The simple fact that proteins are built from 20 amino acids while DNA only contains four different bases, means that the 'signal-to-noise ratio' in protein sequence alignments is much better than in alignments of DNA. Besides this information-theoretical advantage, protein alignments also benefit...

  13. Efficient Scheme for the Generation of Atomic Schroedinger Cat States in an Optical Cavity

    Institute of Scientific and Technical Information of China (English)

    ZHENGShi-Biao; LINLi-Hua; JIANGYun-Kun

    2003-01-01

    An efficient scheme is proposed for the generation of atomic Schroedinger cat states in an optical cavity. In the scheme N three-level atoms are loaded in the optical cavity. Raman coupling of two ground states is achieved via a laser tield and the cavity mode. The cavity mode is always in the vacuum state and the atoms have no probability of being populated in the excited state. Thus, the scheme is insensitive to both the cavity decay and spontaneous emission.

  14. Efficient Scheme for the Generation of Atomic Schrodinger Cat States in an Optical Cavity

    Institute of Scientific and Technical Information of China (English)

    ZHENG Shi-Biao; LIN Li-Hua; JIANG Yun-Kun

    2003-01-01

    An efficient scheme is proposed for the generation of atomic Schrodinger cat states in an optical cavity. Inthe scheme N three-level atoms are loaded in the optical cavity. Raman coupling of two ground states is achieved via alaser field and the cavity mode. The cavity mode is always in the vacuum state and the atoms have no probability ofbeing populated in the excited state. Thus, the scheme is insensitive to both the cavity decay and spontaneous emission.

  15. Real-time monitoring of wind turbine generator shaft alignment using laser measurement.

    OpenAIRE

    2013-01-01

    Shaft Misalignment is one of the most common sources of trouble of wind turbine drive train when rigid couplings connect the shafts. Ideal alignment of the shaft is difficult to be obtained and the couplings attached to the shaft may present angular or parallel misalignment defined also as lateral and axially misalignment. Despite misalignment is often observed in the practice, there are relatively few studies on wind turbine shaft misalignment in the literature and their results are sometime...

  16. Theoretical analysis of nanoparticle-induced homeotropic alignment in nematic liquid crystals

    CERN Document Server

    Choudhary, Amit; Li, Guoqiang

    2015-01-01

    A theoretical analysis of homeotropic alignment induced by nanoparticles (NPs) in a nematic liquid crystal (NLC) sample cell is presented. It is found that such alignment on the surface of a NP causes a change in the orientation of the molecular director near the surface, which in turn induces variations in the elastic constants and free energy. The induced NLC properties allow coupling between nearby NPs, mediated by the NLC molecules. The rotation of the coupled NPs close to the substrate tends to induce a long-range orientation of the NLC molecular director, leading to modification in the alignment at the interface of NLC and substrate which induces the orientation from homogeneous (planar) to homeotropic (vertical) in the bulk material.

  17. Survey and Alignment of the 100MeV Linear Accelerator

    Energy Technology Data Exchange (ETDEWEB)

    Park, Bumsik; Kwon, Hyeokjung; Jang, Jiho; Kim, Hansung; Kim, Daeil; Cho, Yongsub [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2013-05-15

    The 100MeV linear accelerator was installed and under commissioning at the Gyeongju site. The 100MeV proton linac was developed by the KOMAC according to the survey work and the alignment process. 100MeV proton beam will be supplied to the users after the beam commissioning. KOMAC is developing a 100MeV high-duty-factor proton linac. Linac is composed with a 50keV proton injector, a 3MeV RFQ, DTL tanks and a beam dump. In this paper, the survey and alignment scheme are described. To install the accelerator, the align network was built and the survey work was accomplished. On the basis of the survey result, all of the accelerator components were installed in the tunnel with two laser trackers.

  18. Molecular Alignment and Orientation From Laser-Induced Mechanisms to Optimal Control

    CERN Document Server

    Atabek, O

    2002-01-01

    Genetic algorithms, as implemented in optimal control strategies, are currently successfully exploited in a wide range of problems in molecular physics. In this context, laser control of molecular alignment and orientation remains a very promising issue with challenging applications extending from chemical reactivity to nanoscale design. We emphasize the complementarity between basic quantum mechanisms monitoring alignment/orientation processes and optimal control scenarios. More explicitly, if on one hand we can help the optimal control scheme to take advantage of such mechanisms by appropriately building the targets and delineating the parameter sampling space, on the other hand we expect to learn, from optimal control results, some robust and physically sound dynamical mechanisms. We present basic mechanisms for alignment and orientation, such as pendular states accommodated by the molecule-plus-field effective potential and the "kick" mechanism obtained by a sudden excitation. Very interestingly, an optim...

  19. Business and IT alignment in context

    NARCIS (Netherlands)

    Silvius, A.J.G.

    2013-01-01

    Already for more than two decades, the necessity and desirability of aligning business needs and information technology (IT) capabilities is considered to be one of the key issues in IT management. However, several studies report quite low scores on business and IT alignment (BIA). The question “Why

  20. STELLAR: fast and exact local alignments

    Directory of Open Access Journals (Sweden)

    Weese David

    2011-10-01

    Full Text Available Abstract Background Large-scale comparison of genomic sequences requires reliable tools for the search of local alignments. Practical local aligners are in general fast, but heuristic, and hence sometimes miss significant matches. Results We present here the local pairwise aligner STELLAR that has full sensitivity for ε-alignments, i.e. guarantees to report all local alignments of a given minimal length and maximal error rate. The aligner is composed of two steps, filtering and verification. We apply the SWIFT algorithm for lossless filtering, and have developed a new verification strategy that we prove to be exact. Our results on simulated and real genomic data confirm and quantify the conjecture that heuristic tools like BLAST or BLAT miss a large percentage of significant local alignments. Conclusions STELLAR is very practical and fast on very long sequences which makes it a suitable new tool for finding local alignments between genomic sequences under the edit distance model. Binaries are freely available for Linux, Windows, and Mac OS X at http://www.seqan.de/projects/stellar. The source code is freely distributed with the SeqAn C++ library version 1.3 and later at http://www.seqan.de.

  1. Comparative genomics beyond sequence-based alignments

    DEFF Research Database (Denmark)

    Þórarinsson, Elfar; Yao, Zizhen; Wiklund, Eric D.;

    2008-01-01

    Recent computational scans for non-coding RNAs (ncRNAs) in multiple organisms have relied on existing multiple sequence alignments. However, as sequence similarity drops, a key signal of RNA structure--frequent compensating base changes--is increasingly likely to cause sequence-based alignment me...

  2. Compositions for directed alignment of conjugated polymers

    Science.gov (United States)

    Kim, Jinsang; Kim, Bong-Gi; Jeong, Eun Jeong

    2016-04-19

    Conjugated polymers (CPs) achieve directed alignment along an applied flow field and a dichroic ratio of as high as 16.67 in emission from well-aligned thin films and fully realized anisotropic optoelectronic properties of CPs in field-effect transistor (FET).

  3. Achieving Organisational Change through Values Alignment

    Science.gov (United States)

    Branson, Christopher M.

    2008-01-01

    Purpose: The purpose of this paper is to, first, establish the interdependency between the successful achievement of organisational change and the attainment of values alignment within an organisation's culture and then, second, to describe an effective means for attaining such values alignment. Design/methodology/approach: Literature from the…

  4. Probabilistic sequence alignment of stratigraphic records

    Science.gov (United States)

    Lin, Luan; Khider, Deborah; Lisiecki, Lorraine E.; Lawrence, Charles E.

    2014-10-01

    The assessment of age uncertainty in stratigraphically aligned records is a pressing need in paleoceanographic research. The alignment of ocean sediment cores is used to develop mutually consistent age models for climate proxies and is often based on the δ18O of calcite from benthic foraminifera, which records a global ice volume and deep water temperature signal. To date, δ18O alignment has been performed by manual, qualitative comparison or by deterministic algorithms. Here we present a hidden Markov model (HMM) probabilistic algorithm to find 95% confidence bands for δ18O alignment. This model considers the probability of every possible alignment based on its fit to the δ18O data and transition probabilities for sedimentation rate changes obtained from radiocarbon-based estimates for 37 cores. Uncertainty is assessed using a stochastic back trace recursion to sample alignments in exact proportion to their probability. We applied the algorithm to align 35 late Pleistocene records to a global benthic δ18O stack and found that the mean width of 95% confidence intervals varies between 3 and 23 kyr depending on the resolution and noisiness of the record's δ18O signal. Confidence bands within individual cores also vary greatly, ranging from ~0 to >40 kyr. These alignment uncertainty estimates will allow researchers to examine the robustness of their conclusions, including the statistical evaluation of lead-lag relationships between events observed in different cores.

  5. Sambamba : Fast processing of NGS alignment formats

    NARCIS (Netherlands)

    Tarasov, Artem; Vilella, Albert J.; Cuppen, Edwin; Nijman, Isaac J.; Prins, Pjotr

    2015-01-01

    Summary: Sambamba is a high-performance robust tool and library for working with SAM, BAM and CRAM sequence alignment files; the most common file formats for aligned next generation sequencing data. Sambamba is a faster alternative to samtools that exploits multi-core processing and dramatically red

  6. Instructional Alignment under No Child Left Behind

    Science.gov (United States)

    Polikoff, Morgan S.

    2012-01-01

    The alignment of instruction with the content of standards and assessments is the key mediating variable separating the policy of standards-based reform (SBR) from the outcome of improved student achievement. Few studies have investigated SBR's effects on instructional alignment, and most have serious methodological limitations. This research uses…

  7. Vacuum alignment with and without elementary scalars

    DEFF Research Database (Denmark)

    Alanne, Tommi; Gertov, Helene; Meroni, Aurora;

    2016-01-01

    We systematically elucidate differences and similarities of the vacuum alignment issue in composite and renormalizable elementary extensions of the Standard Model featuring a pseudo-Goldstone Higgs. We also provide general conditions for the stability of the vacuum in the elementary framework......, thereby extending previous studies of the vacuum alignment....

  8. Optical packet switching without packet alignment

    DEFF Research Database (Denmark)

    Hansen, Peter Bukhave; Danielsen, Søren Lykke; Stubkjær, Kristian

    1998-01-01

    Operation without packet alignment of an all-optical packet switch is proposed and predicted feasible through a detailed traffic analysis. Packet alignment units are eliminated resulting in a simple switch architecture while optimal traffic performance is maintained through the flexibility provided...

  9. Evaluating Alignment between Curriculum, Assessment, and Instruction

    Science.gov (United States)

    Martone, Andrea; Sireci, Stephen G.

    2009-01-01

    The authors (a) discuss the importance of alignment for facilitating proper assessment and instruction, (b) describe the three most common methods for evaluating the alignment between state content standards and assessments, (c) discuss the relative strengths and limitations of these methods, and (d) discuss examples of applications of each…

  10. Partial Automated Alignment and Integration System

    Science.gov (United States)

    Kelley, Gary Wayne (Inventor)

    2014-01-01

    The present invention is a Partial Automated Alignment and Integration System (PAAIS) used to automate the alignment and integration of space vehicle components. A PAAIS includes ground support apparatuses, a track assembly with a plurality of energy-emitting components and an energy-receiving component containing a plurality of energy-receiving surfaces. Communication components and processors allow communication and feedback through PAAIS.

  11. A precise CT phantom alignment procedure.

    Science.gov (United States)

    Schneiders, N J; Bushong, S C

    1980-01-01

    Two of the AAPM CT performance phantom inserts require precise alignment. We present a method for aligning an insert which makes use of the partial volume effect. We demonstrate that the procedure is sensitive to tilts of less than one degree and, using the slice thickness insert, allows reproducible positioning.

  12. SOA-Driven Business-Software Alignment

    NARCIS (Netherlands)

    Shishkov, Boris; Sinderen, van Marten; Quartel, Dick

    2006-01-01

    The alignment of business processes and their supporting application software is a major concern during the initial software design phases. This paper proposes a design approach addressing this problem of business-software alignment. The approach takes an initial business model as a basis in derivin

  13. Aligning application architecture to the business context

    NARCIS (Netherlands)

    Wieringa, R.J.; Blanken, H.M.; Fokkinga, M.M.; Grefen, P.W.P.J.; Eder, J.; Missikoff, M.

    2003-01-01

    Alignment of application architecture to business architecture is a central problem in the design, acquisition and implementation of information systems in current large-scale information-processing organizations. Current research in architecture alignment is either too strategic or too software imp

  14. What is the Constructivism in Constructive Alignment?

    Science.gov (United States)

    Jervis, Loretta M.; Jervis, Les

    2005-01-01

    This paper examines the concept of constructive alignment in respect of science education. The concept is placed in the context of its two contributory components--constructivism and instructional alignment. The former has a well-established body of critical literature that highlights the challenges of constructivism for both science and science…

  15. Vacuum alignment with(out) elementary scalars

    CERN Document Server

    Alanne, Tommi; Meroni, Aurora; Sannino, Francesco

    2016-01-01

    We systematically elucidate differences and similarities of the vacuum alignment issue in composite and renormalizable elementary extensions of the Standard Model featuring a pseudo-Goldstone Higgs. We also provide general conditions for the stability of the vacuum in the elementary framework, thereby extending previous studies of the vacuum alignment.

  16. The Occupational Pension Schemes Survey 2006

    OpenAIRE

    Sarah Levy; David Miller

    2008-01-01

    Presents findings on the number of schemes, their membership and contributions to schemes by employers and employeesThis article presents findings on the number of occupational pension schemes in 2006, their membership and contributions to schemes by employers and employees. It is based on the Occupational Pension Schemes Annual Report (2006 edition). The findings distinguish between public and private sector schemes and include breakdowns by scheme status (open, closed, frozen or winding up)...

  17. Spinning particles coupled to gravity

    CERN Document Server

    Hojman, Sergio A

    2016-01-01

    Recent experimental work has determined that free falling $^{87}$Rb atoms on Earth, with vertically aligned spins, follow geodesics, thus apparently ruling out spin--gravitation interactions. It is showed that while some spinning matter models coupled to gravitation referenced to in that work seem to be ruled out by the experiment, those same experimental results confirm theoretical results derived from a Lagrangian description of spinning particles coupled to gravity constructed over forty years ago. A proposal to carry out (similar but) different experiments which will help to test the validity of the Universality of Free Fall as opposed to the correctness of the aforementioned Lagrangian theory, is presented.

  18. Semiautomatic beam-based LHC collimator alignment

    CERN Document Server

    Valentino, Gianluca; Bruce, Roderik; Wollmann, Daniel; Sammut, Nicholas; Rossi, Adriana; Redaelli, Stefano

    2012-01-01

    Full beam-based alignment of the LHC collimation system was a time-consuming procedure (up to 28 hours) as the collimators were set up manually. A yearly alignment campaign has been sufficient for now, although in the future due to tighter tolerances this may lead to a decrease in the cleaning efficiency if machine parameters such as the beam orbit drift over time. Automating the collimator setup procedure can reduce the beam time for collimator setup and allow for more frequent alignments, therefore reducing the risk of performance degradation. This article describes the design and testing of a semiautomatic algorithm as a first step towards a fully automatic setup procedure. The parameters used to measure the accuracy and performance of the alignment are defined and determined from experimental data. A comparison of these measured parameters at 450 GeV and 3.5 TeV with manual and semiautomatic alignment is provided.

  19. Accelerated large-scale multiple sequence alignment

    Directory of Open Access Journals (Sweden)

    Lloyd Scott

    2011-12-01

    Full Text Available Abstract Background Multiple sequence alignment (MSA is a fundamental analysis method used in bioinformatics and many comparative genomic applications. Prior MSA acceleration attempts with reconfigurable computing have only addressed the first stage of progressive alignment and consequently exhibit performance limitations according to Amdahl's Law. This work is the first known to accelerate the third stage of progressive alignment on reconfigurable hardware. Results We reduce subgroups of aligned sequences into discrete profiles before they are pairwise aligned on the accelerator. Using an FPGA accelerator, an overall speedup of up to 150 has been demonstrated on a large data set when compared to a 2.4 GHz Core2 processor. Conclusions Our parallel algorithm and architecture accelerates large-scale MSA with reconfigurable computing and allows researchers to solve the larger problems that confront biologists today. Program source is available from http://dna.cs.byu.edu/msa/.

  20. Alignment-free phylogenetics and population genetics.

    Science.gov (United States)

    Haubold, Bernhard

    2014-05-01

    Phylogenetics and population genetics are central disciplines in evolutionary biology. Both are based on comparative data, today usually DNA sequences. These have become so plentiful that alignment-free sequence comparison is of growing importance in the race between scientists and sequencing machines. In phylogenetics, efficient distance computation is the major contribution of alignment-free methods. A distance measure should reflect the number of substitutions per site, which underlies classical alignment-based phylogeny reconstruction. Alignment-free distance measures are either based on word counts or on match lengths, and I apply examples of both approaches to simulated and real data to assess their accuracy and efficiency. While phylogeny reconstruction is based on the number of substitutions, in population genetics, the distribution of mutations along a sequence is also considered. This distribution can be explored by match lengths, thus opening the prospect of alignment-free population genomics.

  1. Bokeh Mirror Alignment for Cherenkov Telescopes

    CERN Document Server

    Ahnen, M L; Balbo, M; Bergmann, M; Biland, A; Blank, M; Bretz, T; Bruegge, K A; Buss, J; Domke, M; Dorner, D; Einecke, S; Hempfling, C; Hildebrand, D; Hughes, G; Lustermann, W; Mannheim, K; Mueller, S A; Neise, D; Neronov, A; Noethe, M; Overkemping, A -K; Paravac, A; Pauss, F; Rhode, W; Shukla, A; Temme, F; Thaele, J; Toscano, S; Vogler, P; Walter, R; Wilbert, A

    2016-01-01

    Imaging Atmospheric Cherenkov Telescopes (IACTs) need imaging optics with large apertures and high image intensities to map the faint Cherenkov light emitted from cosmic ray air showers onto their image sensors. Segmented reflectors fulfill these needs, and composed from mass production mirror facets they are inexpensive and lightweight. However, as the overall image is a superposition of the individual facet images, alignment remains a challenge. Here we present a simple, yet extendable method, to align a segmented reflector using its Bokeh. Bokeh alignment does not need a star or good weather nights but can be done even during daytime. Bokeh alignment optimizes the facet orientations by comparing the segmented reflectors Bokeh to a predefined template. The optimal Bokeh template is highly constricted by the reflector's aperture and is easy accessible. The Bokeh is observed using the out of focus image of a near by point like light source in a distance of about 10 focal lengths. We introduce Bokeh alignment ...

  2. Grassmannian Differential Limited Feedback for Interference Alignment

    CERN Document Server

    Ayach, Omar El

    2011-01-01

    Channel state information (CSI) in the interference channel can be used to precode, align, and reduce the dimension of interference at the receivers, to achieve the channel's maximum multiplexing gain, through what is known as interference alignment. Most interference alignment algorithms require knowledge of all the interfering channels to compute the alignment precoders. CSI, considered available at the receivers, can be shared with the transmitters via limited feedback. When alignment is done by coding over frequency extensions in a single antenna system, the required CSI lies on the Grassmannian manifold and its structure can be exploited in feedback. Unfortunately, the number of channels to be shared grows with the square of the number of users creating too much overhead with conventional feedback methods. This paper proposes Grassmannian differential feedback to reduce feedback overhead by exploiting both the channel's temporal correlation and Grassmannian structure. The performance of the proposed algo...

  3. Entrepreneurial Couples

    DEFF Research Database (Denmark)

    Dahl, Michael S.; Van Praag, Mirjam; Thompson, Peter

    2015-01-01

    We study motivations for and outcomes of couples starting up a joint firm, using a sample of 1,069 Danish couples that established a joint enterprise between 2001 and 2010, while comparing them to a set of comparable firms and couples. The main motivation for joint entrepreneurship is to create...

  4. Maximally aligned states in sup 9 sup 9 Ag

    CERN Document Server

    Sohler, D; Bednarczyk, P; Blomqvist, J M; Cederkäll, J; De Angelis, G; De Poli, M; Dombrádi, Z; Fahlander, C; Foltescu, D; Grawe, H; Huijnen, J; Jerrestam, D; Johnson, A; Juutinen, S; Klamra, W; Kownacki, J P; Kérek, A; Likar, A; Lipoglavsek, M; Maekelae, E; Norlin, L O; Nyberg, J; Palacz, M; Persson, J; Roth, H A; Seweryniak, D; Shizuma, T; Skeppstedt, Ö; Sletten, G; Timar, J; Toermaenen, S; Weiszflog, M

    2003-01-01

    Excited states of sup 9 sup 9 Ag were populated via the sup 5 sup 0 Cr+ sup 5 sup 8 Ni (261 MeV) reaction using the NORDBALL detector array equipped with charged-particle and neutron detector systems for reaction channel separation. On the basis of the measured gamma gamma-coincidence relations and angular distribution ratios a significantly extended level scheme has been constructed up to E sub x propor to 7.8 MeV and I=35/2. The experimental results were described within the framework of the shell model. Candidates for states fully aligned in the pi g sub 9 sub / sub 2 sup - sup 3 nu(d sub 5 sub / sub 2 , g sub 7 sub / sub 2) sup 2 valence configuration space were found at 4109 and 6265 keV. (orig.)

  5. Lagrangian Relaxation Applied to Sparse Global Network Alignment

    CERN Document Server

    El-Kebir, Mohammed; Klau, Gunnar W

    2011-01-01

    Data on molecular interactions is increasing at a tremendous pace, while the development of solid methods for analyzing this network data is lagging behind. This holds in particular for the field of comparative network analysis, where one wants to identify commonalities between biological networks. Since biological functionality primarily operates at the network level, there is a clear need for topology-aware comparison methods. In this paper we present a method for global network alignment that is fast and robust, and can flexibly deal with various scoring schemes taking both node-to-node correspondences as well as network topologies into account. It is based on an integer linear programming formulation, generalizing the well-studied quadratic assignment problem. We obtain strong upper and lower bounds for the problem by improving a Lagrangian relaxation approach and introduce the software tool natalie 2.0, a publicly available implementation of our method. In an extensive computational study on protein inte...

  6. Electric Field Effects on Fiber Alignment Using an Auxiliary Electrode During Electrospinning

    Science.gov (United States)

    Carnell, Lisa S.; Siochi, Emilie J.; Wincheski, Russell A.; Holloway, Nancy M.; Clark, Robert L.

    2009-01-01

    Control of electrospun fiber placement and distribution was investigated by examining the effect of electric field parameters on the electrospinning of fibers. The experimental set-up used in this study eliminated the bending instability and whipping, allowing the jet to be modeled as a stable trajectory. Coupling of experimental and computational results suggests the potential for predicting aligned fiber distribution in electrospun mats.

  7. R3D Align: global pairwise alignment of RNA 3D structures using local superpositions

    Science.gov (United States)

    Rahrig, Ryan R.; Leontis, Neocles B.; Zirbel, Craig L.

    2010-01-01

    Motivation: Comparing 3D structures of homologous RNA molecules yields information about sequence and structural variability. To compare large RNA 3D structures, accurate automatic comparison tools are needed. In this article, we introduce a new algorithm and web server to align large homologous RNA structures nucleotide by nucleotide using local superpositions that accommodate the flexibility of RNA molecules. Local alignments are merged to form a global alignment by employing a maximum clique algorithm on a specially defined graph that we call the ‘local alignment’ graph. Results: The algorithm is implemented in a program suite and web server called ‘R3D Align’. The R3D Align alignment of homologous 3D structures of 5S, 16S and 23S rRNA was compared to a high-quality hand alignment. A full comparison of the 16S alignment with the other state-of-the-art methods is also provided. The R3D Align program suite includes new diagnostic tools for the structural evaluation of RNA alignments. The R3D Align alignments were compared to those produced by other programs and were found to be the most accurate, in comparison with a high quality hand-crafted alignment and in conjunction with a series of other diagnostics presented. The number of aligned base pairs as well as measures of geometric similarity are used to evaluate the accuracy of the alignments. Availability: R3D Align is freely available through a web server http://rna.bgsu.edu/R3DAlign. The MATLAB source code of the program suite is also freely available for download at that location. Supplementary information: Supplementary data are available at Bioinformatics online. Contact: r-rahrig@onu.edu PMID:20929913

  8. Aligning, analyzing, and visualizing sequences for antibody engineering: Automated recognition of immunoglobulin variable region features.

    Science.gov (United States)

    Jarasch, Alexander; Skerra, Arne

    2017-01-01

    The analysis and comparison of large numbers of immunoglobulin (Ig) sequences that arise during an antibody selection campaign can be time-consuming and tedious. Typically, the identification and annotation of framework as well as complementarity-determining regions (CDRs) is based on multiple sequence alignments using standardized numbering schemes, which allow identification of equivalent residues among different family members but often necessitate expert knowledge and manual intervention. Moreover, due to the enormous length variability of some CDRs the benefit of conventional Ig numbering schemes is limited and the calculation of correct sequence alignments can become challenging. Whereas, in principle, a well established set of rules permits the assignment of CDRs from the amino acid sequence alone, no currently available sequence alignment editor provides an algorithm to annotate new Ig sequences accordingly. Here we present a unique pattern matching method implemented into our recently developed ANTICALIgN editor that automatically identifies all hypervariable and framework regions in experimentally elucidated antibody sequences using so-called "regular expressions." By combination of this widely supported software syntax with the unique capabilities of real-time aligning, editing and analyzing extended sets of amino acid and/or nucleotide sequences simultaneously on a local workstation, ANTICALIgN provides a powerful utility for antibody engineering. Proteins 2016; 85:65-71. © 2016 Wiley Periodicals, Inc.

  9. Algorithms for Automatic Alignment of Arrays

    Science.gov (United States)

    Chatterjee, Siddhartha; Gilbert, John R.; Oliker, Leonid; Schreiber, Robert; Sheffler, Thomas J.

    1996-01-01

    Aggregate data objects (such as arrays) are distributed across the processor memories when compiling a data-parallel language for a distributed-memory machine. The mapping determines the amount of communication needed to bring operands of parallel operations into alignment with each other. A common approach is to break the mapping into two stages: an alignment that maps all the objects to an abstract template, followed by a distribution that maps the template to the processors. This paper describes algorithms for solving the various facets of the alignment problem: axis and stride alignment, static and mobile offset alignment, and replication labeling. We show that optimal axis and stride alignment is NP-complete for general program graphs, and give a heuristic method that can explore the space of possible solutions in a number of ways. We show that some of these strategies can give better solutions than a simple greedy approach proposed earlier. We also show how local graph contractions can reduce the size of the problem significantly without changing the best solution. This allows more complex and effective heuristics to be used. We show how to model the static offset alignment problem using linear programming, and we show that loop-dependent mobile offset alignment is sometimes necessary for optimum performance. We describe an algorithm with for determining mobile alignments for objects within do loops. We also identify situations in which replicated alignment is either required by the program itself or can be used to improve performance. We describe an algorithm based on network flow that replicates objects so as to minimize the total amount of broadcast communication in replication.

  10. Coordinated renewable energy support schemes

    DEFF Research Database (Denmark)

    Morthorst, P.E.; Jensen, S.G.

    2006-01-01

    This paper illustrates the effect that can be observed when support schemes for renewable energy are regionalised. Two theoretical examples are used to explain interactive effects on, e.g., the price of power, conditions for conventional power producers, and changes in import and export of power...... RES-E support schemes already has a common liberalised power market. In this case the introduction of a common support scheme for renewable technologies will lead to more efficient sitings of renewable plants, improving economic and environmental performance of the total power system...

  11. Schemes for Deterministic Polynomial Factoring

    CERN Document Server

    Ivanyos, Gábor; Saxena, Nitin

    2008-01-01

    In this work we relate the deterministic complexity of factoring polynomials (over finite fields) to certain combinatorial objects we call m-schemes. We extend the known conditional deterministic subexponential time polynomial factoring algorithm for finite fields to get an underlying m-scheme. We demonstrate how the properties of m-schemes relate to improvements in the deterministic complexity of factoring polynomials over finite fields assuming the generalized Riemann Hypothesis (GRH). In particular, we give the first deterministic polynomial time algorithm (assuming GRH) to find a nontrivial factor of a polynomial of prime degree n where (n-1) is a smooth number.

  12. Provable Secure Identity Based Generalized Signcryption Scheme

    CERN Document Server

    Yu, Gang; Shen, Yong; Han, Wenbao

    2010-01-01

    According to actual needs, generalized signcryption scheme can flexibly work as an encryption scheme, a signature scheme or a signcryption scheme. In this paper, firstly, we give a security model for identity based generalized signcryption which is more complete than existing model. Secondly, we propose an identity based generalized signcryption scheme. Thirdly, we give the security proof of the new scheme in this complete model. Comparing with existing identity based generalized signcryption, the new scheme has less implementation complexity. Moreover, the new scheme has comparable computation complexity with the existing normal signcryption schemes.

  13. Multiple deep convolutional neural networks averaging for face alignment

    Science.gov (United States)

    Zhang, Shaohua; Yang, Hua; Yin, Zhouping

    2015-05-01

    Face alignment is critical for face recognition, and the deep learning-based method shows promise for solving such issues, given that competitive results are achieved on benchmarks with additional benefits, such as dispensing with handcrafted features and initial shape. However, most existing deep learning-based approaches are complicated and quite time-consuming during training. We propose a compact face alignment method for fast training without decreasing its accuracy. Rectified linear unit is employed, which allows all networks approximately five times faster convergence than a tanh neuron. An eight learnable layer deep convolutional neural network (DCNN) based on local response normalization and a padding convolutional layer (PCL) is designed to provide reliable initial values during prediction. A model combination scheme is presented to further reduce errors, while showing that only two network architectures and hyperparameter selection procedures are required in our approach. A three-level cascaded system is ultimately built based on the DCNNs and model combination mode. Extensive experiments validate the effectiveness of our method and demonstrate comparable accuracy with state-of-the-art methods on BioID, labeled face parts in the wild, and Helen datasets.

  14. Feedback control of flow alignment in sheared liquid crystals.

    Science.gov (United States)

    Strehober, David A; Schöll, Eckehard; Klapp, Sabine H L

    2013-12-01

    Based on a continuum theory, we investigate the manipulation of the nonequilibrium behavior of a sheared liquid crystal via closed-loop feedback control. Our goal is to stabilize a specific dynamical state, that is, the stationary "flow alignment," under conditions where the uncontrolled system displays oscillatory director dynamics with in-plane symmetry. To this end we employ time-delayed feedback control (TDFC), where the equation of motion for the ith component q(i)(t) of the order parameter tensor is supplemented by a control term involving the difference q(i)(t)-q(i)(t-τ). In this diagonal scheme, τ is the delay time. We demonstrate that the TDFC method successfully stabilizes flow alignment for suitable values of the control strength K and τ; these values are determined by solving an exact eigenvalue equation. Moreover, our results show that only small values of K are needed when the system is sheared from an isotropic equilibrium state, contrary to the case where the equilibrium state is nematic.

  15. Multiscale Point Correspondence Using Feature Distribution and Frequency Domain Alignment

    Directory of Open Access Journals (Sweden)

    Zeng-Shun Zhao

    2012-01-01

    Full Text Available In this paper, a hybrid scheme is proposed to find the reliable point-correspondences between two images, which combines the distribution of invariant spatial feature description and frequency domain alignment based on two-stage coarse to fine refinement strategy. Firstly, the source and the target images are both down-sampled by the image pyramid algorithm in a hierarchical multi-scale way. The Fourier-Mellin transform is applied to obtain the transformation parameters at the coarse level between the image pairs; then, the parameters can serve as the initial coarse guess, to guide the following feature matching step at the original scale, where the correspondences are restricted in a search window determined by the deformation between the reference image and the current image; Finally, a novel matching strategy is developed to reject the false matches by validating geometrical relationships between candidate matching points. By doing so, the alignment parameters are refined, which is more accurate and more flexible than a robust fitting technique. This in return can provide a more accurate result for feature correspondence. Experiments on real and synthetic image-pairs show that our approach provides satisfactory feature matching performance.

  16. Capacity-achieving CPM schemes

    CERN Document Server

    Perotti, Alberto; Benedetto, Sergio; Montorsi, Guido

    2008-01-01

    The pragmatic approach to coded continuous-phase modulation (CPM) is proposed as a capacity-achieving low-complexity alternative to the serially-concatenated CPM (SC-CPM) coding scheme. In this paper, we first perform a selection of the best spectrally-efficient CPM modulations to be embedded into SC-CPM schemes. Then, we consider the pragmatic capacity (a.k.a. BICM capacity) of CPM modulations and optimize it through a careful design of the mapping between input bits and CPM waveforms. The so obtained schemes are cascaded with an outer serially-concatenated convolutional code to form a pragmatic coded-modulation system. The resulting schemes exhibit performance very close to the CPM capacity without requiring iterations between the outer decoder and the CPM demodulator. As a result, the receiver exhibits reduced complexity and increased flexibility due to the separation of the demodulation and decoding functions.

  17. Underground hydro scheme for Ullapool

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    Scoltish and Southern Energy has awarded a contract for a new hydropower plant Scotland, the company's first hydro project since the 1960s. The S6 million scheme will be built by Miller Civil Engineering Services Ltd.

  18. New Ideas on Labeling Schemes

    DEFF Research Database (Denmark)

    Rotbart, Noy Galil

    evaluation of fully dynamic labeling schemes. Due to a connection between adjacency labeling schemes and the graph theoretical study of induced universal graphs, we study these in depth and show novel results for bounded degree graphs and power-law graphs. We also survey and make progress on the related......With ever increasing size of graphs, many distributed graph systems emerged to store, preprocess and analyze them. While such systems ease up congestion on servers, they incur certain penalties compared to centralized data structure. First, the total storage required to store a graph...... in a distributed fashion increases. Second, attempting to answer queries on vertices of a graph stored in a distributed fashion can be significantly more complicated. In order to lay theoretical foundations to the first penalty mentioned a large body of work concentrated on labeling schemes. A labeling scheme...

  19. A Novel Iris Segmentation Scheme

    Directory of Open Access Journals (Sweden)

    Chen-Chung Liu

    2014-01-01

    Full Text Available One of the key steps in the iris recognition system is the accurate iris segmentation from its surrounding noises including pupil, sclera, eyelashes, and eyebrows of a captured eye-image. This paper presents a novel iris segmentation scheme which utilizes the orientation matching transform to outline the outer and inner iris boundaries initially. It then employs Delogne-Kåsa circle fitting (instead of the traditional Hough transform to further eliminate the outlier points to extract a more precise iris area from an eye-image. In the extracted iris region, the proposed scheme further utilizes the differences in the intensity and positional characteristics of the iris, eyelid, and eyelashes to detect and delete these noises. The scheme is then applied on iris image database, UBIRIS.v1. The experimental results show that the presented scheme provides a more effective and efficient iris segmentation than other conventional methods.

  20. Good governance for pension schemes

    CERN Document Server

    Thornton, Paul

    2011-01-01

    Regulatory and market developments have transformed the way in which UK private sector pension schemes operate. This has increased demands on trustees and advisors and the trusteeship governance model must evolve in order to remain fit for purpose. This volume brings together leading practitioners to provide an overview of what today constitutes good governance for pension schemes, from both a legal and a practical perspective. It provides the reader with an appreciation of the distinctive characteristics of UK occupational pension schemes, how they sit within the capital markets and their social and fiduciary responsibilities. Providing a holistic analysis of pension risk, both from the trustee and the corporate perspective, the essays cover the crucial role of the employer covenant, financing and investment risk, developments in longevity risk hedging and insurance de-risking, and best practice scheme administration.

  1. Proper alignment of the microscope.

    Science.gov (United States)

    Rottenfusser, Rudi

    2013-01-01

    The light microscope is merely the first element of an imaging system in a research facility. Such a system may include high-speed and/or high-resolution image acquisition capabilities, confocal technologies, and super-resolution methods of various types. Yet more than ever, the proverb "garbage in-garbage out" remains a fact. Image manipulations may be used to conceal a suboptimal microscope setup, but an artifact-free image can only be obtained when the microscope is optimally aligned, both mechanically and optically. Something else is often overlooked in the quest to get the best image out of the microscope: Proper sample preparation! The microscope optics can only do its job when its design criteria are matched to the specimen or vice versa. The specimen itself, the mounting medium, the cover slip, and the type of immersion medium (if applicable) are all part of the total optical makeup. To get the best results out of a microscope, understanding the functions of all of its variable components is important. Only then one knows how to optimize these components for the intended application. Different approaches might be chosen to discuss all of the microscope's components. We decided to follow the light path which starts with the light source and ends at the camera or the eyepieces. To add more transparency to this sequence, the section up to the microscope stage was called the "Illuminating Section", to be followed by the "Imaging Section" which starts with the microscope objective. After understanding the various components, we can start "working with the microscope." To get the best resolution and contrast from the microscope, the practice of "Koehler Illumination" should be understood and followed by every serious microscopist. Step-by-step instructions as well as illustrations of the beam path in an upright and inverted microscope are included in this chapter. A few practical considerations are listed in Section 3.

  2. PDF fit in the fixed-flavour-number scheme

    Energy Technology Data Exchange (ETDEWEB)

    Alekhin, S. [Deutsches Elektronen-Synchrotron (DESY), Zeuthen (Germany); Institute for High Energy Physics, Moscow (Russian Federation); Bluemlein, J.; Moch, S. [Deutsches Elektronen-Synchrotron (DESY), Zeuthen (Germany)

    2012-02-15

    We discuss the heavy-quark contribution to deep inelastic scattering in the scheme with n{sub f}=3;4;5 fixed flavors. Based on the recent ABM11 PDF analysis of world data for deep-inelastic scattering and fixed-target data for the Drell-Yan process with the running-mass definition for heavy quarks we show that fixed flavor number scheme is sufficient for describing the deep-inelastic-scattering data in the entire kinematic range. We compare with other PDF sets and comment on the implications for measuring the strong coupling constant {alpha}{sub s}(M{sub Z}).

  3. Breeding schemes in reindeer husbandry

    Directory of Open Access Journals (Sweden)

    Lars Rönnegård

    2003-04-01

    Full Text Available The objective of the paper was to investigate annual genetic gain from selection (G, and the influence of selection on the inbreeding effective population size (Ne, for different possible breeding schemes within a reindeer herding district. The breeding schemes were analysed for different proportions of the population within a herding district included in the selection programme. Two different breeding schemes were analysed: an open nucleus scheme where males mix and mate between owner flocks, and a closed nucleus scheme where the males in non-selected owner flocks are culled to maximise G in the whole population. The theory of expected long-term genetic contributions was used and maternal effects were included in the analyses. Realistic parameter values were used for the population, modelled with 5000 reindeer in the population and a sex ratio of 14 adult females per male. The standard deviation of calf weights was 4.1 kg. Four different situations were explored and the results showed: 1. When the population was randomly culled, Ne equalled 2400. 2. When the whole population was selected on calf weights, Ne equalled 1700 and the total annual genetic gain (direct + maternal in calf weight was 0.42 kg. 3. For the open nucleus scheme, G increased monotonically from 0 to 0.42 kg as the proportion of the population included in the selection programme increased from 0 to 1.0, and Ne decreased correspondingly from 2400 to 1700. 4. In the closed nucleus scheme the lowest value of Ne was 1300. For a given proportion of the population included in the selection programme, the difference in G between a closed nucleus scheme and an open one was up to 0.13 kg. We conclude that for mass selection based on calf weights in herding districts with 2000 animals or more, there are no risks of inbreeding effects caused by selection.

  4. An arbitrated quantum signature scheme

    CERN Document Server

    Zeng, G; Zeng, Guihua; Keitel, Christoph H.

    2002-01-01

    The general principle for a quantum signature scheme is proposed and investigated based on ideas from classical signature schemes and quantum cryptography. The suggested algorithm is implemented by a symmetrical quantum key cryptosystem and Greenberger-Horne-Zeilinger (GHZ) triplet states and relies on the availability of an arbitrator. We can guarantee the unconditional security of the algorithm, mostly due to the correlation of the GHZ triplet states and the use of quantum one-time pads.

  5. Galaxy alignment on large and small scales

    CERN Document Server

    Kang, X; Wang, Y O; Dutton, A; Macciò, A

    2014-01-01

    Galaxies are not randomly distributed across the universe but showing different kinds of alignment on different scales. On small scales satellite galaxies have a tendency to distribute along the major axis of the central galaxy, with dependence on galaxy properties that both red satellites and centrals have stronger alignment than their blue counterparts. On large scales, it is found that the major axes of Luminous Red Galaxies (LRGs) have correlation up to 30Mpc/h. Using hydro-dynamical simulation with star formation, we investigate the origin of galaxy alignment on different scales. It is found that most red satellite galaxies stay in the inner region of dark matter halo inside which the shape of central galaxy is well aligned with the dark matter distribution. Red centrals have stronger alignment than blue ones as they live in massive haloes and the central galaxy-halo alignment increases with halo mass. On large scales, the alignment of LRGs is also from the galaxy-halo shape correlation, but with some ex...

  6. Sparse alignment for robust tensor learning.

    Science.gov (United States)

    Lai, Zhihui; Wong, Wai Keung; Xu, Yong; Zhao, Cairong; Sun, Mingming

    2014-10-01

    Multilinear/tensor extensions of manifold learning based algorithms have been widely used in computer vision and pattern recognition. This paper first provides a systematic analysis of the multilinear extensions for the most popular methods by using alignment techniques, thereby obtaining a general tensor alignment framework. From this framework, it is easy to show that the manifold learning based tensor learning methods are intrinsically different from the alignment techniques. Based on the alignment framework, a robust tensor learning method called sparse tensor alignment (STA) is then proposed for unsupervised tensor feature extraction. Different from the existing tensor learning methods, L1- and L2-norms are introduced to enhance the robustness in the alignment step of the STA. The advantage of the proposed technique is that the difficulty in selecting the size of the local neighborhood can be avoided in the manifold learning based tensor feature extraction algorithms. Although STA is an unsupervised learning method, the sparsity encodes the discriminative information in the alignment step and provides the robustness of STA. Extensive experiments on the well-known image databases as well as action and hand gesture databases by encoding object images as tensors demonstrate that the proposed STA algorithm gives the most competitive performance when compared with the tensor-based unsupervised learning methods.

  7. Coelostat and heliostat - Theory of alignment

    Science.gov (United States)

    Demianski, M.; Pasachoff, J. M.

    1984-06-01

    For perfectly aligned heliostats and coelostats tracking at the solar rate and half the solar rate, respectively, the solar beam has no translational motion. But, particularly in the field at eclipses, it is not possible to align heliostats and coelostats with infinite precision. The authors derive the effect of small misalignments on the translational motion of the beam, and give tables to allow the calculation of the accuracy to which the instruments must be mounted and adjusted to attain a desired accuracy over a given duration. Further, it is shown how to derive the necessary adjustments to improve alignment, given measurements of the tracking error.

  8. Rotational Alignment Altered by Source Position Correlations

    Science.gov (United States)

    Jacobs, Chris S.; Heflin, M. B.; Lanyi, G. E.; Sovers, O. J.; Steppe, J. A.

    2010-01-01

    In the construction of modern Celestial Reference Frames (CRFs) the overall rotational alignment is only weakly constrained by the data. Therefore, common practice has been to apply a 3-dimensional No-Net-Rotation (NNR) constraint in order to align an under-construction frame to the ICRF. We present evidence that correlations amongst source position parameters must be accounted for in order to properly align a CRF at the 5-10 (mu)as level of uncertainty found in current work. Failure to do so creates errors at the 10-40 (mu)as level.

  9. Robust and resistant 2D shape alignment

    DEFF Research Database (Denmark)

    Larsen, Rasmus; Eiriksson, Hrafnkell

    2001-01-01

    \\_\\$\\backslash\\$infty\\$ norm alignments are formulated as linear programming problems. The linear vector function formulation along with the different norms results in alignment methods that are both resistant from influence from outliers, robust wrt. errors in the annotation and capable of handling missing datapoints......We express the alignment of 2D shapes as the minimization of the norm of a linear vector function. The minimization is done in the \\$l\\_1\\$, \\$l\\_2\\$ and the \\$l\\_\\$\\backslash\\$infty\\$ norms using well known standard numerical methods. In particular, the \\$l\\_1\\$ and the \\$l...

  10. Utilizing Time Redundancy for Particle Filter-Based Transfer Alignment

    Science.gov (United States)

    Chattaraj, Suvendu; Mukherjee, Abhik

    2016-07-01

    Signal detection in the presence of high noise is a challenge in natural sciences. From understanding signals emanating out of deep space probes to signals in protein interactions for systems biology, domain specific innovations are needed. The present work is in the domain of transfer alignment (TA), which deals with estimation of the misalignment of deliverable daughter munitions with respect to that of the delivering mother platform. In this domain, the design of noise filtering scheme has to consider a time varying and nonlinear system dynamics at play. The accuracy of conventional particle filter formulation suffers due to deviations from modeled system dynamics. An evolutionary particle filter can overcome this problem by evolving multiple system models through few support points per particle. However, this variant has even higher time complexity for real-time execution. As a result, measurement update gets deferred and the estimation accuracy is compromised. By running these filter algorithms on multiple processors, the execution time can be reduced, to allow frequent measurement updates. Such scheme ensures better system identification so that performance improves in case of simultaneous ejection of multiple daughters and also results in better convergence of TA algorithms for single daughter.

  11. Robust scheme for implemention of quantum phase gates for two atoms

    Institute of Scientific and Technical Information of China (English)

    Zheng Shi-Biao

    2009-01-01

    We propose a scheme for implementing conditional quantum phase gates for two four-state atoms trapped in a cavity.The two ground states of the atoms are coupled through two Raman processes induced by the cavity mode and two classical fields.Under certain conditions nonresonant Raman processes lead to two-atom coupling and can be used to produce conditional phase gates.The scheme is insensitive to cavity decay,thermal photons,and atomic spontaneous emission.The scheme does not require individual addressing of the atoms.

  12. An image encryption scheme based on the MLNCML system using DNA sequences

    Science.gov (United States)

    Zhang, Ying-Qian; Wang, Xing-Yuan; Liu, Jia; Chi, Ze-Lin

    2016-07-01

    We propose a new image scheme based on the spatiotemporal chaos of the Mixed Linear-Nonlinear Coupled Map Lattices (MLNCML). This spatiotemporal chaotic system has more cryptographic features in dynamics than the system of Coupled Map Lattices (CML). In the proposed scheme, we employ the strategy of DNA computing and one time pad encryption policy, which can enhance the sensitivity to the plaintext and resist differential attack, brute-force attack, statistical attack and plaintext attack. Simulation results and theoretical analysis indicate that the proposed scheme has superior high security.

  13. SOAP3-dp: fast, accurate and sensitive GPU-based short read aligner.

    Directory of Open Access Journals (Sweden)

    Ruibang Luo

    Full Text Available To tackle the exponentially increasing throughput of Next-Generation Sequencing (NGS, most of the existing short-read aligners can be configured to favor speed in trade of accuracy and sensitivity. SOAP3-dp, through leveraging the computational power of both CPU and GPU with optimized algorithms, delivers high speed and sensitivity simultaneously. Compared with widely adopted aligners including BWA, Bowtie2, SeqAlto, CUSHAW2, GEM and GPU-based aligners BarraCUDA and CUSHAW, SOAP3-dp was found to be two to tens of times faster, while maintaining the highest sensitivity and lowest false discovery rate (FDR on Illumina reads with different lengths. Transcending its predecessor SOAP3, which does not allow gapped alignment, SOAP3-dp by default tolerates alignment similarity as low as 60%. Real data evaluation using human genome demonstrates SOAP3-dp's power to enable more authentic variants and longer Indels to be discovered. Fosmid sequencing shows a 9.1% FDR on newly discovered deletions. SOAP3-dp natively supports BAM file format and provides the same scoring scheme as BWA, which enables it to be integrated into existing analysis pipelines. SOAP3-dp has been deployed on Amazon-EC2, NIH-Biowulf and Tianhe-1A.

  14. Aligned Fibrous Scaffold Induced Aligned Growth of Corneal Stroma Cells in vitro Culture

    Institute of Scientific and Technical Information of China (English)

    GAO Yan; YAN Jing; CUI Xue-jun; WANG Hong-yan; WANG Qing

    2012-01-01

    To investigate the contribution of fibre arrangement to guiding the aligned growth of corneal stroma cells,aligned and randomly oriented fibrous scaffolds of gelatin and poly-L-lactic acid(PLLA) were fabricated by electrospinning.A comparative study of two different systems with corneal stroma cells on randomly organized and aligned fibres were conducted.The efficiency of the scaffolds for inducing the aligned growth of cells was assessed by morphological observation and 3-(4,5-dimethylthiazol-2-yl)-2,5-diphenyl-tetrazolium bromide(MTT) assay.Results show that the cells cultured on both randomly oriented and aligned scaffolds maintained normal morphology and well spreading as well as long term proliferation.Importantly,corneal stroma cells grew high orderly on the aligned scaffold,while the cells grew disordered on the randomly oriented scaffold.Moreover,the cells exhibited higher viability in aligned scaffold than that in randomly oriented scaffold.These results indcate that electrospinng to prepare aligned fibrous scaffolds has provided an effective approach to the aligned growth of corneal stroma cells in vitro.Our findings that fiber arrangement plays a crucial role in guiding the aligned growth of cells may be helpful to the development of better biomaterials for tissue engineered cornea.

  15. Provable Secure Identity Based Generalized Signcryption Scheme

    OpenAIRE

    Yu, Gang; Ma, Xiaoxiao; Shen, Yong; Han, Wenbao

    2010-01-01

    According to actual needs, generalized signcryption scheme can flexibly work as an encryption scheme, a signature scheme or a signcryption scheme. In this paper, firstly, we give a security model for identity based generalized signcryption which is more complete than existing model. Secondly, we propose an identity based generalized signcryption scheme. Thirdly, we give the security proof of the new scheme in this complete model. Comparing with existing identity based generalized signcryption...

  16. Reduced coupling with global pulses in quantum registers

    OpenAIRE

    Yuan, Haidong; Koroleva, Van D. M.; Khaneja, Navin

    2015-01-01

    Decoupling is an important tool to prolong the coherence time of quantum systems. Most decoupling schemes have been assuming selective controls on the system and it is believed that with global pulses one can only decouple systems with certain coupling terms like secular dipole-dipole coupling. In this article we show that with global pulses it is possible to reduce the coupling strength of other types of coupling, which we demonstrate with Ising coupling. The complexity of such pulses is ind...

  17. Hexagonal Pixels and Indexing Scheme for Binary Images

    Science.gov (United States)

    Johnson, Gordon G.

    2004-01-01

    A scheme for resampling binaryimage data from a rectangular grid to a regular hexagonal grid and an associated tree-structured pixel-indexing scheme keyed to the level of resolution have been devised. This scheme could be utilized in conjunction with appropriate image-data-processing algorithms to enable automated retrieval and/or recognition of images. For some purposes, this scheme is superior to a prior scheme that relies on rectangular pixels: one example of such a purpose is recognition of fingerprints, which can be approximated more closely by use of line segments along hexagonal axes than by line segments along rectangular axes. This scheme could also be combined with algorithms for query-image-based retrieval of images via the Internet. A binary image on a rectangular grid is generated by raster scanning or by sampling on a stationary grid of rectangular pixels. In either case, each pixel (each cell in the rectangular grid) is denoted as either bright or dark, depending on whether the light level in the pixel is above or below a prescribed threshold. The binary data on such an image are stored in a matrix form that lends itself readily to searches of line segments aligned with either or both of the perpendicular coordinate axes. The first step in resampling onto a regular hexagonal grid is to make the resolution of the hexagonal grid fine enough to capture all the binaryimage detail from the rectangular grid. In practice, this amounts to choosing a hexagonal-cell width equal to or less than a third of the rectangular- cell width. Once the data have been resampled onto the hexagonal grid, the image can readily be checked for line segments aligned with the hexagonal coordinate axes, which typically lie at angles of 30deg, 90deg, and 150deg with respect to say, the horizontal rectangular coordinate axis. Optionally, one can then rotate the rectangular image by 90deg, then again sample onto the hexagonal grid and check for line segments at angles of 0deg, 60deg

  18. Flavour alignment in physics beyond the standard model

    Energy Technology Data Exchange (ETDEWEB)

    Braeuninger, Carolin Barbara

    2012-11-21

    There are numerous reasons to think that the Standard Model of physics is not the ultimate theory of nature on very small scales. However, attempts to construct theories that go beyond the Standard Model generically lead to high rates of flavour changing neutral processes that are in conflict with experiment: Quarks are the fundamental constituents of protons and neutrons. Together with electrons they form the visible matter of the universe1. They come in three generations or ''flavours''. In interactions, quarks of different generations can mix, i.e. a quark of one flavour can transform into a quark of another flavour. In the Standard Model, at first order in perturbation theory, such processes occur only via the exchange of a charged particle. Flavour changing neutral processes can only arise in processes involving loops of charged particles. This is due to the fact that all couplings of two quarks to a neutral particle are diagonal in the basis of the mass eigenstates of the quarks. There is thus no mixing of quarks of different flavour at first order. Since the loop processes are suppressed by a loop factor, the Standard Model predicts very low rates for neutral processes that change the flavour of quarks. So far, this is in agreement with experiment. In extensions of the Standard Model, new couplings to the quarks are usually introduced. In general there is no reason why the new coupling matrices should be diagonal in the mass basis of the quarks. These models therefore predict high rates for processes that mix quarks of different flavour. Extensions of the Standard Model must therefore have a non-trivial flavour structure. A possibility to avoid flavour violation is to assume that the new couplings are aligned with the mass matrices of the quarks, i.e. diagonal in the same basis. This alignment could be due to a flavour symmetry. In this thesis, two extensions of the Standard Model with alignment are studied. The first is a simple

  19. Entrepreneurial Couples

    DEFF Research Database (Denmark)

    Dahl, Michael S.; Van Praag, Mirjam; Thompson, Peter

    We study possible motivations for co-entrepenurial couples to start up a joint firm, using a sample of 1,069 Danish couples that established a joint enterprise between 2001 and 2010. We compare their pre-entry characteristics, firm performance and postdissolution private and financial outcomes...... with a selected set of comparable firms and couples. We find evidence that couples often establish a business together because one spouse – most commonly the female – has limited outside opportunities in the labor market. However, the financial benefits for each of the spouses, and especially the female...

  20. Entrepreneurial Couples

    DEFF Research Database (Denmark)

    Dahl, Michael S.; Van Praag, Mirjam; Thompson, Peter

    We study possible motivations for co-entrepenurial couples to start up a joint firm, us-ing a sample of 1,069 Danish couples that established a joint enterprise between 2001 and 2010. We compare their pre-entry characteristics, firm performance and post-dissolution private and financial outcomes...... with a selected set of comparable firms and couples. We find evidence that couples often establish a business together because one spouse - most commonly the female - has limited outside opportunities in the labor market. However, the financial benefits for each of the spouses, and especially the female...