WorldWideScience

Sample records for afm-12 1-km avhrr

  1. Mapping the global land surface using 1 km AVHRR data

    Science.gov (United States)

    Lauer, D.T.; Eidenshink, J.C.

    1998-01-01

    The scientific requirements for mapping the global land surface using 1 km advanced very high resolution radiometer (AVHRR) data have been set forth by the U.S. Global Change Research Program; the International Geosphere Biosphere Programme (IGBP); The United Nations; the National Oceanic and Atmospheric Administration (NOAA); the Committee on Earth Observations Satellites; and the National Aeronautics and Space Administration (NASA) mission to planet Earth (MTPE) program. Mapping the global land surface using 1 km AVHRR data is an international effort to acquire, archive, process, and distribute 1 km AVHRR data to meet the needs of the international science community. A network of AVHRR receiving stations, along with data recorded by NOAA, has been acquiring daily global land coverage since April 1, 1992. A data set of over 70,000 AVHRR images is archived and distributed by the United States Geological Survey (USGS) EROS Data Center, and the European Space Agency. Under the guidance of the IGBP, processing standards have been developed for calibration, atmospheric correction, geometric registration, and the production of global 10-day maximum normalized difference vegetation index (NDVI) composites. The major uses of the composites are for the study of surface vegetation condition, mapping land cover, and deriving biophysical characteristics of terrestrial ecosystems. A time-series of 54 10-day global vegetation index composites for the period of April 1, 1992 through September 1993 has been produced. The production of a time-series of 33 10-day global vegetation index composites using NOAA-14 data for the period of February 1, 1995 through December 31, 1995 is underway. The data products are available from the USGS, in cooperation with NASA's MTPE program and other international organizations.

  2. The 1 km AVHRR global land data set: first stages in implementation

    Science.gov (United States)

    Eidenshink, J.C.; Faundeen, J.L.

    1994-01-01

    The global land 1 km data set project represents an international effort to acquire, archive, process, and distribute 1 km AVHRR data of the entire global land surface in order to meet the needs of the international science community. A network of 26 high resolution picture transmission (HRPT) stations, along with data recorded by the National Oceanic and Atmospheric Administration (NOAA), has been acquiring daily global land coverage since 1 April 1992. A data set of over 30000 AVHRR images has been archived and made available for distribution by the United States Geological Survey, EROS Data Center and the European Space Agency. Under the guidance of the International Geosphere Biosphere programme, processing standards for the AVHRR data have been developed for calibration, atmospheric correction, geometric registration, and the production of global 10-day maximum normalized difference vegetation index (NDVI) composites. The major uses of the composites are related to the study of surface vegetation cover. A prototype 10-day composite was produced for the period of 21–30 June 1992. Production of an 18-month time series of 10-day composites is underway.

  3. Land cover mapping, fire regeneration, and scaling studies in the Canadian boreal forest with 1 km AVHRR and Landsat TM data

    Science.gov (United States)

    Steyaert, L.T.; Hall, F.G.; Loveland, Thomas R.

    1997-01-01

    A multitemporal 1 km advanced very high resolution radiometer (AVHRR) land cover analysis approach was used as the basis for regional land cover mapping, fire disturbance-regeneration, and multiresolution land cover scaling studies in the boreal forest ecosystem of central Canada. The land cover classification was developed by using regional field observations from ground and low-level aircraft transits to analyze spectral-temporal clusters that were derived from an unsupervised cluster analysis of monthly normalized difference vegetation index (NDVI) image composites (April-September 1992). Quantitative areal proportions of the major boreal forest components were determined for a 821 km ?? 619 km region, ranging from the southern grasslands-boreal forest ecotone to the northern boreal transitional forest. The boreal wetlands (mostly lowland black spruce, tamarack, mosses, fens, and bogs) occupied approximately 33% of the region, while lakes accounted for another 13%. Upland mixed coniferous-deciduous forests represented 23% of the ecosystem. A SW-NE productivity gradient across the region is manifested by three levels of tree stand density for both the boreal wetland conifer and the mixed forest classes, which are generally aligned with isopleths of regional growing degree days. Approximately 30% of the region was directly affected by fire disturbance within the preceding 30-35 years, especially in the Canadian Shield Zone where large fire-regeneration patterns contribute to the heterogeneous boreal landscape. Intercomparisons with land cover classifications derived from 30-m Landsat Thematic Mapper (TM) data provided important insights into the relative accuracy of the 1 km AVHRR land cover classification. Primarily due to the multitemporal NDVI image compositing process, the 1 km AVHRR land cover classes have an effective spatial resolution in the 3-4 km range; therefore fens, bogs, small water bodies, and small patches of dry jack pine cannot be resolved within

  4. 4 km NODC/RSMAS AVHRR Pathfinder Version 5.0 and 5.1 Monthly Harmonic Climatologies (1982-2008) (NODC Accession 0075098)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This accession contains a global, 4km monthly sea surface temperature climatology derived from harmonic analysis of the AVHRR Pathfinder Version 5.0 and 5.1 sea...

  5. 4 km NODC/RSMAS AVHRR Pathfinder Version 5.0 and 5.1 Daily Harmonic Climatologies (1982-2008) (NODC Accession 0071181)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This accession contains a global, 4km daily sea surface temperature climatology derived from harmonic analysis of the AVHRR Pathfinder Version 5.0 and 5.1 sea...

  6. AVHRR Polar 1 Km Level 1B Data Set

    Data.gov (United States)

    National Aeronautics and Space Administration — Please note that the machine on which these AVHRR data are processed has reached its life expectancy and will no longer be available as of 02 June 2008 until further...

  7. 4 km NODC/RSMAS AVHRR Pathfinder Version 5.0 and 5.1 5-day Harmonic Climatologies (1982-2008) (NODC Accession 0071182)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This accession contains a global, 4km 5-day sea surface temperature climatology derived from harmonic analysis of the AVHRR Pathfinder Version 5.0 and 5.1 sea...

  8. NOAA Daily 25km Global Optimally Interpolated Sea Surface Temperature (OISST) in situ and AVHRR analysis supplemented with AVHRR Pathfinder Version 5.0 climatological SST for inland and coastal pixels, 1981-09-01 through 2010-12-31 (NODC Accession 0071180)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This accession contains the daily 25km global Optimally Interpolated Sea Surface Temperature (OISST) in situ and AVHRR analysis, supplemented with AVHRR Pathfinder...

  9. AVHRR GAC SST Reanalysis Version 1 (RAN1

    Directory of Open Access Journals (Sweden)

    Alexander Ignatov

    2016-04-01

    Full Text Available In response to its users’ needs, the National Oceanic and Atmospheric Administration (NOAA initiated reanalysis (RAN of the Advanced Very High Resolution Radiometer (AVHRR Global Area Coverage (GAC; 4 km sea surface temperature (SST data employing its Advanced Clear Sky Processor for Oceans (ACSPO retrieval system. Initially, AVHRR/3 data from five NOAA and two Metop satellites from 2002 to 2015 have been reprocessed. The derived SSTs have been matched up with two reference SSTs—the quality controlled in situ SSTs from the NOAA in situ Quality Monitor (iQuam and the Canadian Meteorological Centre (CMC L4 SST analysis—and analyzed in the NOAA SST Quality Monitor (SQUAM online system. The corresponding clear-sky ocean brightness temperatures (BT in AVHRR bands 3b, 4 and 5 (centered at 3.7, 11, and 12 µm, respectively have been compared with the Community Radiative Transfer Model simulations in another NOAA online system, Monitoring of Infrared Clear-sky Radiances over Ocean for SST (MICROS. For some AVHRRs, the time series of “AVHRR minus reference” SSTs and “observed minus model” BTs are unstable and inconsistent, with artifacts in the SSTs and BTs strongly correlated. In the official “Reanalysis version 1” (RAN1, data from only five platforms—two midmorning (NOAA-17 and Metop-A and three afternoon (NOAA-16, -18 and -19—were included during the most stable periods of their operations. The stability of the SST time series was further improved using variable regression SST coefficients, similarly to how it was done in the NOAA/NASA Pathfinder version 5.2 (PFV5.2 dataset. For data assimilation applications, especially those blending satellite and in situ SSTs, we recommend bias-correcting the RAN1 SSTs using the newly developed sensor-specific error statistics (SSES, which are reported in the product files. Relative performance of RAN1 and PFV5.2 SSTs is discussed. Work is underway to improve the calibration of AVHRR/3s and

  10. AVHRR Polar Pathfinder Twice-Daily 1.25 km EASE-Grid Composites

    Data.gov (United States)

    National Aeronautics and Space Administration — Please note that the machine on which these AVHRR data are processed has reached its life expectancy and will no longer be available as of 02 June 2008 until further...

  11. Relationship between herbaceous biomass and 1km (2) advanced very high resolution radiometer (AVHRR) NDVI in Kruger National Park, South Africa

    CSIR Research Space (South Africa)

    Wessels, Konrad J

    2006-03-01

    Full Text Available biomass and 1-km2 Advanced Very High Resolution Radiometer (AVHRR) NDVI in Kruger National Park, South Africa K. J. WESSELS*{, S. D. PRINCE{, N. ZAMBATIS{, S. MACFADYEN{, P. E. FROST§" and D. VAN ZYL§ {Department of Geography, University of Maryland... production (Prince and Justice 1991, Tucker et al. 1991a,b, Myneni et al. *Corresponding author. Email: wessels@geog.umd.edu International Journal of Remote Sensing Vol. 27, No. 5, 10 March 2006, 951–973 International Journal of Remote Sensing ISSN 0143...

  12. A satellite-based climatology (1989-2012) of lake surface water temperature from AVHRR 1-km for Central European water bodies

    Science.gov (United States)

    Riffler, Michael; Wunderle, Stefan

    2013-04-01

    The temperature of lakes is an important parameter for lake ecosystems influencing the speed of physio-chemical reactions, the concentration of dissolved gazes (e.g. oxygen), and vertical mixing. Even small temperature changes might have irreversible effects on the lacustrine system due to the high specific heat capacity of water. These effects could alter the quality of lake water depending on parameters like lake size and volume. Numerous studies mention lake water temperature as an indicator of climate change and in the Global Climate Observing System (GCOS) requirements it is listed as an essential climate variable. In contrast to in situ observations, satellite imagery offers the possibility to derive spatial patterns of lake surface water temperature (LSWT) and their variability. Moreover, although for some European lakes long in situ time series are available, the temperatures of many lakes are not measured or only on a non-regular basis making these observations insufficient for climate monitoring. However, only few satellite sensors offer the possibility to analyze time series which cover more than 20 years. The Advanced Very High Resolution Radiometer (AVHRR) is among these and has been flown on the National Oceanic and Atmospheric Administration (NOAA) Polar Operational Environmental Satellites (POES) and on the Meteorological Operational Satellites (MetOp) from the European Organisation for the Exploitation of Meteorological Satellites (EUMETSAT) as a heritage instrument for almost 35 years. It will be carried on for at least ten more years finally offering a unique opportunity for satellite-based climate studies. Herein we present the results from a study initiated by the Swiss GCOS office to generate a satellite-based LSWT climatology for the pre-alpine water bodies in Switzerland. It relies on the extensive AVHRR 1-km data record (1985-2012) of the Remote Sensing Research Group at the University of Bern (RSGB) and has been derived from the AVHRR/2

  13. AVHRR Pathfinder version 5.3 level 3 collated (L3C) global 4km sea surface temperature

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The AVHRR Pathfinder Version 5.3 (PFV53) L3C Sea Surface Temperature data set is a collection of global, twice-daily (Day and Night) 4km sea surface temperature...

  14. 4 km NODC/RSMAS AVHRR Pathfinder Cloud Screened Version 5.0 Monthly Climatologies (1985-2006) (NODC Accession 0110657)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This accession contains a global, 4km monthly sea surface temperature climatology derived from harmonic analysis of the AVHRR Pathfinder Version 5.0 sea surface...

  15. The 1990 conterminous U.S. AVHRR data set

    International Nuclear Information System (INIS)

    Eidenshink, J.C.

    1992-01-01

    The U.S. Geological Survey, using NOAA-11 Advanced Very High Resolution Radiometer (AVHRR) 1-km data, has produced a time series of 19 biweekly maximum normalized difference vegetation index (NDVI) composites of the conterminous United States for the 1990 growing season. Each biweekly composite included data from approximately 20 calibrated and georegistered daily overpasses. The output is a data set which includes all five calibrated AVHRR channels, NDVI values, three satellite/solar viewing angles, and date of observation pointer for each biweekly composite. The data set is intended for assessing seasonal variations in vegetation condition and provides a foundation for studying long-term changes in vegetation resulting from human interactions or global climate alterations. 12 refs

  16. AVHRR Pathfinder Version 5.2 Level 3 Collated (L3C) Global 4km Sea Surface Temperature for 1981-2012

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The AVHRR Pathfinder Version 5.2 Sea Surface Temperature data set (PFV52) is a collection of global, twice-daily 4km sea surface temperature data produced in a...

  17. GHRSST Level 4 Australian Bureau of Meteorology GAMSSA_28km Global SST:1

    Data.gov (United States)

    National Aeronautics and Space Administration — The GAMSSA v1.0 system blends NAVOCEANO's GAC 9.9 km x 4.4 km resolution AVHRR L2P SST1m data (NOAA-17, NOAA-18 and METOP-A), European Space Agency's 0.17 AATSR skin...

  18. Lake surface water temperatures of European Alpine lakes (1989-2013) based on the Advanced Very High Resolution Radiometer (AVHRR) 1 km data set

    Science.gov (United States)

    Riffler, M.; Wunderle, S.

    2014-05-01

    Lake water temperature (LWT) is an important driver of lake ecosystems and it has been identified as an indicator of climate change. Thus, the Global Climate Observing System (GCOS) lists LWT as an Essential Climate Variable (ECV). Although for some European lakes long in situ time series of LWT do exist, many lakes are not observed or only on a non-regular basis making these observations insufficient for climate monitoring. Satellite data can provide the information needed. However, only few satellite sensors offer the possibility to analyse time series which cover 25 years or more. The Advanced Very High Resolution Radiometer (AVHRR) is among these and has been flown as a heritage instrument for almost 35 years. It will be carried on for at least ten more years finally offering a unique opportunity for satellite-based climate studies. Herein we present a satellite-based lake surface water temperature (LSWT) data set for European (pre-alpine) water bodies based on the extensive AVHRR 1 km data record (1989-2013) of the Remote Sensing Research Group at the University of Bern. It has been compiled out of AVHRR/2 (NOAA-07, -09, -11, -14) and AVHRR/3 (NOAA-16, -17, -18, -19 and Metop-A) data. The high accuracy needed for climate related studies requires careful pre-processing and consideration of the atmospheric state. Especially data from NOAA-16 and prior satellites were prone to noise, e.g., due to transmission errors or fluctuations in the instrument's thermal state. This has resulted in partly corrupted thermal calibration data and may cause errors of up to several Kelvin in the final resulting LSWT. Thus, a multi-stage correction scheme has been applied to the data to minimize these artefacts. The LSWT retrieval is based on a simulation-based scheme making use of the Radiative Transfer for TOVS (RTTOV) Version 10 together with operational analysis and reanalysis data from the European Centre for Medium Range Weather Forecasts. The resulting LSWTs were

  19. The 1 km resolution global data set: needs of the International Geosphere Biosphere Programme

    Science.gov (United States)

    Townshend, J.R.G.; Justice, C.O.; Skole, D.; Malingreau, J.-P.; Cihlar, J.; Teillet, P.; Sadowski, F.; Ruttenberg, S.

    1994-01-01

    Examination of the scientific priorities for the International Geosphere Biosphere Programme (IGBP) reveals a requirement for global land data sets in several of its Core Projects. These data sets need to be at several space and time scales. Requirements are demonstrated for the regular acquisition of data at spatial resolutions of 1 km and finer and at high temporal frequencies. Global daily data at a resolution of approximately 1 km are sensed by the Advanced Very High Resolution Radiometer (AVHRR), but they have not been available in a single archive. It is proposed, that a global data set of the land surface is created from remotely sensed data from the AVHRR to support a number of IGBP's projects. This data set should have a spatial resolution of 1 km and should be generated at least once every 10 days for the entire globe. The minimum length of record should be a year, and ideally a system should be put in place which leads to the continuous acquisition of 1 km data to provide a base line data set prior to the Earth Observing System (EOS) towards the end of the decade. Because of the high cloud cover in many parts of the world, it is necessary to plan for the collection of data from every orbit. Substantial effort will be required in the preprocessing of the data set involving radiometric calibration, atmospheric correction, geometric correction and temporal compositing, to make it suitable for the extraction of information.

  20. A Non-Stationary 1981–2012 AVHRR NDVI3g Time Series

    Directory of Open Access Journals (Sweden)

    Jorge E. Pinzon

    2014-07-01

    Full Text Available The NDVI3g time series is an improved 8-km normalized difference vegetation index (NDVI data set produced from Advanced Very High Resolution Radiometer (AVHRR instruments that extends from 1981 to the present. The AVHRR instruments have flown or are flying on fourteen polar-orbiting meteorological satellites operated by the National Oceanic and Atmospheric Administration (NOAA and are currently flying on two European Organization for the Exploitation of Meteorological Satellites (EUMETSAT polar-orbiting meteorological satellites, MetOp-A and MetOp-B. This long AVHRR record is comprised of data from two different sensors: the AVHRR/2 instrument that spans July 1981 to November 2000 and the AVHRR/3 instrument that continues these measurements from November 2000 to the present. The main difficulty in processing AVHRR NDVI data is to properly deal with limitations of the AVHRR instruments. Complicating among-instrument AVHRR inter-calibration of channels one and two is the dual gain introduced in late 2000 on the AVHRR/3 instruments for both these channels. We have processed NDVI data derived from the Sea-Viewing Wide Field-of-view Sensor (SeaWiFS from 1997 to 2010 to overcome among-instrument AVHRR calibration difficulties. We use Bayesian methods with high quality well-calibrated SeaWiFS NDVI data for deriving AVHRR NDVI calibration parameters. Evaluation of the uncertainties of our resulting NDVI values gives an error of ± 0.005 NDVI units for our 1981 to present data set that is independent of time within our AVHRR NDVI continuum and has resulted in a non-stationary climate data set.

  1. A Non-Stationary 1981-2012 AVHRR NDVI(sub 3g) Time Series

    Science.gov (United States)

    Pinzon, Jorge E.; Tucker, Compton J.

    2014-01-01

    The NDVI(sub 3g) time series is an improved 8-km normalized difference vegetation index (NDVI) data set produced from Advanced Very High Resolution Radiometer (AVHRR) instruments that extends from 1981 to the present. The AVHRR instruments have flown or are flying on fourteen polar-orbiting meteorological satellites operated by the National Oceanic and Atmospheric Administration (NOAA) and are currently flying on two European Organization for the Exploitation of Meteorological Satellites (EUMETSAT) polar-orbiting meteorological satellites, MetOp-A and MetOp-B. This long AVHRR record is comprised of data from two different sensors: the AVHRR/2 instrument that spans July 1981 to November 2000 and the AVHRR/3 instrument that continues these measurements from November 2000 to the present. The main difficulty in processing AVHRR NDVI data is to properly deal with limitations of the AVHRR instruments. Complicating among-instrument AVHRR inter-calibration of channels one and two is the dual gain introduced in late 2000 on the AVHRR/3 instruments for both these channels. We have processed NDVI data derived from the Sea-Viewing Wide Field-of-view Sensor (SeaWiFS) from 1997 to 2010 to overcome among-instrument AVHRR calibration difficulties. We use Bayesian methods with high quality well-calibrated SeaWiFS NDVI data for deriving AVHRR NDVI calibration parameters. Evaluation of the uncertainties of our resulting NDVI values gives an error of plus or minus 0.005 NDVI units for our 1981 to present data set that is independent of time within our AVHRR NDVI continuum and has resulted in a non-stationary climate data set.

  2. Evaluation of NLDAS 12-km and downscaled 1-km temperature products in New York State for potential use in health exposure response studies

    Science.gov (United States)

    Estes, M. G., Jr.; Insaf, T.; Crosson, W. L.; Al-Hamdan, M. Z.

    2017-12-01

    Heat exposure metrics (maximum and minimum daily temperatures,) have a close relationship with human health. While meteorological station data provide a good source of point measurements, temporal and spatially consistent temperature data are needed for health studies. Reanalysis data such as the North American Land Data Assimilation System's (NLDAS) 12-km gridded product are an effort to resolve spatio-temporal environmental data issues; the resolution may be too coarse to accurately capture the effects of elevation, mixed land/water areas, and urbanization. As part of this NASA Applied Sciences Program funded project, the NLDAS 12-km air temperature product has been downscaled to 1-km using MODIS Land Surface Temperature patterns. Limited validation of the native 12-km NLDAS reanalysis data has been undertaken. Our objective is to evaluate the accuracy of both the 12-km and 1-km downscaled products using the US Historical Climatology Network station data geographically dispersed across New York State. Statistical methods including correlation, scatterplots, time series and summary statistics were used to determine the accuracy of the remotely-sensed maximum and minimum temperature products. The specific effects of elevation and slope on remotely-sensed temperature product accuracy were determined with 10-m digital elevation data that were used to calculate percent slope and link with the temperature products at multiple scales. Preliminary results indicate the downscaled temperature product improves accuracy over the native 12-km temperature product with average correlation improvements from 0.81 to 0.85 for minimum and 0.71 to 0.79 for maximum temperatures in 2009. However, the benefits vary temporally and geographically. Our results will inform health studies using remotely-sensed temperature products to determine health risk from excessive heat by providing a more robust assessment of the accuracy of the 12-km NLDAS product and additional accuracy gained from

  3. AVHRR for monitoring global tropical deforestation

    Science.gov (United States)

    Malingreau, J. P.; Laporte, N.; Tucker, C. J.

    1989-01-01

    Advanced Very High Resolution Radiometer (AVHRR) data have been used to assess the dynamics of forest trnsformations in three parts of the tropical belt. A large portion of the Amazon Basin has been systematically covered by Local Area Coverage (LAC) data in the 1985-1987 period. The analysis of the vegetation index and thermal data led to the identification and measurement of large areas of active deforestation. The Kalimantan/Borneo forest fires were monitored and their impact was evaluated using the Global Area Coverage (GAC) 4 km resolution data. Finally, High Resolution Picture Transmission (HRPT) data have provided preliminary information on current activities taking place at the boundary between the savanna and the forest in the Southern part of West Africa. The AVHRR approach is found to be a highly valuable means for carrying out deforestation assessments in regional and global perspectives.

  4. SAFARI 2000 Tree Cover from AVHRR, 1-km, 1992-1993 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set consists of a southern African subset of the 1-km Global Tree Cover Data Set developed at the Laboratory for Global Remote Sensing Studies...

  5. Intercomparison of 30+ years of AVHRR and Landsat-5 TM Surface Reflectance using Multiple Pseudo-Invariant Calibration Sites

    Science.gov (United States)

    Santamaría-Artigas, A. E.; Franch, B.; Vermote, E.; Roger, J. C.; Justice, C. O.

    2017-12-01

    The 30+ years daily surface reflectance long term data record (LTDR) from the Advanced Very High Resolution Radiometer (AVHRR) is a valuable source of information for long-term studies of the Earth surface. This LTDR was generated by combining observations from multiple AVHRR sensors aboard different NOAA satellites starting from the early 1980s, and due to the lack of on-board calibration its quality should be evaluated. Previous studies have used observations from the Moderate Resolution Imaging Spectroradiometer (MODIS) over pseudo-invariant calibration sites (PICS) as a calibrated reference to assess the performance of AVHRR products. However, this limits the evaluation to the period after MODIS launch. In this work, the AVHRR surface reflectance LTDR was evaluated against Landsat-5 Thematic Mapper (TM) data using observations from 4 well known pseudo-invariant calibration sites (i.e. Sonoran, Saharan, Sudan1, and Libya4) over an extended time period (1984-2011). For the intercomparison, AVHRR and TM observations of each site were extracted and averaged over a 20 km x 20 km area and aggregated to monthly mean values. In order to account for the spectral differences between sensors, Hyperion hyperspectral data from the Sonoran and Libya4 sites were convolved with sensor-specific relative spectral responses, and used to compute spectral band adjustment factors (SBAFs). Results of the intercomparison are reported in terms of the root mean square difference (RMSD) and determination coefficient (r2). In general, there is good agreement between the surface reflectance products from both sensors. The overall RMSD and r2 for all the sites and AVHRR/TM combinations were 0.03 and 0.85 for the red band, and 0.04 and 0.81 for the near-infrared band. These results show the strong performance of the AVHRR surface reflectance LTDR through all of the considered period. Thus, remarking its usefulness and value for long term Earth studies. Figure 1 shows the red (filled markers

  6. SAFARI 2000 Tree Cover from AVHRR, 1-km, 1992-1993 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set consists of a southern African subset of the 1-km Global Tree Cover Data Set developed at the Laboratory for Global Remote Sensing Studies (LGRSS) at...

  7. LBA Regional Tree Cover from AVHRR, 1-km, 1992-1993 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set is a subset of the 1-km global tree cover data set (DeFries et al. 1999) developed at the Laboratory for Global Remote Sensing Studies...

  8. LBA Regional Tree Cover from AVHRR, 1-km, 1992-1993 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set is a subset of the 1-km global tree cover data set (DeFries et al. 1999) developed at the Laboratory for Global Remote Sensing Studies (LGRSS) at the...

  9. Estimating the beam attenuation coefficient in coastal waters from AVHRR imagery

    Science.gov (United States)

    Gould, Richard W.; Arnone, Robert A.

    1997-09-01

    This paper presents an algorithm to estimate particle beam attenuation at 660 nm ( cp660) in coastal areas using the red and near-infrared channels of the NOAA AVHRR satellite sensor. In situ reflectance spectra and cp660 measurements were collected at 23 stations in Case I and II waters during an April 1993 cruise in the northern Gulf of Mexico. The reflectance spectra were weighted by the spectral response of the AVHRR sensor and integrated over the channel 1 waveband to estimate the atmospherically corrected signal recorded by the satellite. An empirical relationship between integrated reflectance and cp660 values was derived with a linear correlation coefficient of 0.88. Because the AVHRR sensor requires a strong channel 1 signal, the algorithm is applicable in highly turbid areas ( cp660 > 1.5 m -1) where scattering from suspended sediment strongly controls the shape and magnitude of the red (550-650 nm) reflectance spectrum. The algorithm was tested on a data set collected 2 years later in different coastal waters in the northern Gulf of Mexico and satellite estimates of cp660 averaged within 37% of measured values. Application of the algorithm provides daily images of nearshore regions at 1 km resolution for evaluating processes affecting ocean color distribution patterns (tides, winds, currents, river discharge). Further validation and refinement of the algorithm are in progress to permit quantitative application in other coastal areas. Published by Elsevier Science Ltd

  10. Alpine cloud climatology using long-term NOAA-AVHRR satellite data

    Energy Technology Data Exchange (ETDEWEB)

    Kaestner, M.; Kriebel, K.T.

    2000-07-01

    Three different climates have been identified by our evaluation of AVHRR (advanced very high resolution radiometer) data using APOLLO (AVHRR processing scheme over land, clouds and ocean) for a five-years cloud climatology of the Alpine region. The cloud cover data from four layers were spatially averaged in boxes of 15 km by 14 km. The study area only comprises 540 km by 560 km, but contains regions with moderate, Alpine and Mediterranean climate. Data from the period July 1989 until December 1996 have been considered. The temporal resolution is one scene per day, the early afternoon pass, yielding monthly means of satellite derived cloud coverages 5% to 10% above the daily mean compared to conventional surface observation. At nonvegetated sites the cloudiness is sometimes significantly overestimated. Averaging high resolution cloud data seems to be superior to low resolution measurements of cloud properties and averaging is favourable in topographical homogeneous regions only. The annual course of cloud cover reveals typical regional features as foehn or temporal singularities as the so-called Christmas thaw. The cloud cover maps in spatially high resolution show local luff/lee features which outline the orography. Less cloud cover is found over the Alps than over the forelands in winter, an accumulation of thick cirrus is found over the High Alps and an accumulation of thin cirrus north of the Alps. (orig.)

  11. Detection of Water Bodies from AVHRR Data—A TIMELINE Thematic Processor

    Directory of Open Access Journals (Sweden)

    Andreas J. Dietz

    2017-01-01

    Full Text Available The assessment of water body dynamics is not only in itself a topic of strong demand, but the presence of water bodies is important information when it comes to the derivation of products such as land surface temperature, leaf area index, or snow/ice cover mapping from satellite data. For the TIMELINE project, which aims to derive such products for a long time series of Advanced Very High Resolution Radiometer (AVHRR data for Europe, precise water masks are therefore not only an important stand-alone product themselves, they are also an essential interstage information layer, which has to be produced automatically after preprocessing of the raw satellite data. The respective orbit segments from AVHRR are usually more than 2000 km wide and several thousand km long, thus leading to fundamentally different observation geometries, including varying sea surface temperatures, wave patterns, and sediment and algae loads. The water detection algorithm has to be able to manage these conditions based on a limited amount of spectral channels and bandwidths. After reviewing and testing already available methods for water body detection, we concluded that they cannot fully overcome the existing challenges and limitations. Therefore an extended approach was implemented, which takes into account the variations of the reflectance properties of water surfaces on a local to regional scale; the dynamic local threshold determination will train itself automatically by extracting a coarse-scale classification threshold, which is refined successively while analyzing subsets of the orbit segment. The threshold is then interpolated by fitting a minimum curvature surface before additional steps also relying on the brightness temperature are included to reduce possible misclassifications. The classification results have been validated using Landsat and Moderate Resolution Imaging Spectroradiometer (MODIS data and proven an overall accuracy of 93.4%, with the majority of

  12. EUR-L3P-NAR_AVHRR_NOAA_19:1

    Data.gov (United States)

    National Aeronautics and Space Administration — A Group for HIgh Resolution Sea Surface Temperature (GHRSST) dataset for the North Atlantic Region (NAR) from the Advanced Very High Resolution Radiometer (AVHRR) on...

  13. AVHRR Leads-ARI Polar Gridded Brightness Temperatures, Version 1

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set consists of AVHRR imagery selected from hard copy 'quick look' images to provide the best coverage possible over the Arctic approximately every three...

  14. NOAA Climate Data Record (CDR) of Sea Surface Temperature (SST) from AVHRR Pathfinder, Version 5.2

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The AVHRR Pathfinder Version 5.2 Sea Surface Temperature data set (PFV52) is a collection of global, twice-daily 4km sea surface temperature data produced in a...

  15. Practical Application and Obstacles of AVHRR Thermal Data for Estimation of Effusion Rates at Tolbachik Volcano, Kamchatka Peninsula, Russian Federation

    Science.gov (United States)

    McAlpin, D. B.; Meyer, F. J.; Webley, P. W.

    2017-12-01

    Using thermal data from Advanced Very High Resolution Radiometer (AVHRR) sensors, we investigated algorithms to estimate the effusive volume of lava flows from the 2012-13 eruption of Tolbachik Volcano with high temporal resolution. AVHRR are polar orbiting, radiation detection instruments that provide reflectance and radiance data in six spectral bands with a ground resolution of 1.1 km². During the Tolbachik eruption of 2012-13, active AVHRR instruments were available aboard four polar orbiting platforms. Although the primary purpose of the instruments is climate and ocean studies, their multiple platforms provide global coverage at least twice daily, with data for all regions of the earth no older than six hours. This frequency makes the AVHRR instruments particularly suitable for the study of volcanic activity. While methods for deriving effusion rates from thermal observations have been previously published, a number of topics complicate their practical application. In particular, these include (1) unknown material parameters used in the estimation process; (2) relatively coarse resolution of thermal sensors; (3) optimizing a model to describe the number of thermal regimes within each pixel and (4) frequent saturation issues in thermal channels. We present ongoing investigations into effusion rate estimation from AVHRR data using the 2012-13 eruption of Tolbachik Volcano as a test event. For this eruption we studied approaches for coping with issues (1) - (4) to pave the way to a more operational implementation of published techniques. To address (1), we used Monte Carlo simulations to understand the sensitivity of effusion rate estimates to changes in material parameters. To study (2) and (3) we compared typical two-component (exposed lava on ambient background) and three-component models (exposed lava, cooled crust, ambient background) for their relative performance. To study issue (4), we compared AVHRR-derived effusion rates to reference data derived from

  16. GHRSST Level 2P NEODAAS AVHRR18 Local SST:1

    Data.gov (United States)

    National Aeronautics and Space Administration — The production of these AVHRR L2P data is a NEODAAS activity in collaboration with the UK National Centre for Ocean Forecasting (NCOF). NEODAAS-Dundee acquires...

  17. GHRSST Level 2P NEODAAS AVHRR17 Local SST:1

    Data.gov (United States)

    National Aeronautics and Space Administration — The production of these AVHRR L2P data is a NEODAAS activity in collaboration with the UK National Centre for Ocean Forecasting (NCOF). NEODAAS-Dundee acquires...

  18. Mesoscale structures viewed by SAR and AVHRR near the Canary islands

    Directory of Open Access Journals (Sweden)

    E. D. Barton

    2001-07-01

    Full Text Available Comparison of Synthetic Aperture Radar and Advanced Very High Resolution Radiometry images of sea surface backscatter and temperature during the peak of the summer Trade winds reveals many aspects of the regional oceanography of the Canary Islands. A strong correspondence occurs between the SAR and AVHRR signals. The generally uniform wind field is perturbed as it flows past the islands producing regions of calm immediately downstream. These are bounded by lines of strong horizontal wind shear that coincide with temperature fronts between warmer lee waters and the cooler surrounding ocean. Weaker winds prevail up to 50 km downstream while enhanced wind speed on the boundaries of the lee can extend more than 150 km. Lee waves are excited in the atmospheric inversion layer where the wind passes over abrupt island topography. Quantitative estimates of wind speed made with the CMOD4 algorithm are unreliable in the downstream region because wind direction is variable and unknown and because spatial gradients in air-sea temperature difference affect atmospheric boundary layer stability. A large anticyclone south of Tenerife strongly influenced the estimated wind speed probably because higher ocean temperatures in its centre caused atmospheric instability and increased radar backscatter. The temperature fronts marking boundaries of the upwelling filament and strong eddies observed in AVHRR appear as lines of current shear in the SAR images.

  19. GHRSST Level 2P USA NAVOCEANO AVHRR17 Global SST:1

    Data.gov (United States)

    National Aeronautics and Space Administration — Multi-Channel SST retreivals generated in real-time from NOAA-17 AVHRR Global Area Coverage data. Used operationally in Navy oceanographic analyses and forecasts.

  20. GHRSST Level 2P USA NAVOCEANO AVHRR18 Global SST:1

    Data.gov (United States)

    National Aeronautics and Space Administration — Multi-Channel SST retreivals generated in real-time from NOAA-18 AVHRR Global Area Coverage data. Used operationally in Navy oceanographic analyses and forecasts.

  1. Arctic sea ice albedo from AVHRR

    Science.gov (United States)

    Lindsay, R. W.; Rothrock, D. A.

    1994-01-01

    The seasonal cycle of surface albedo of sea ice in the Arctic is estimated from measurements made with the Advanced Very High Resolution Radiometer (AVHRR) on the polar-orbiting satellites NOAA-10 and NOAA-11. The albedos of 145 200-km-square cells are analyzed. The cells are from March through September 1989 and include only those for which the sun is more than 10 deg above the horizon. Cloud masking is performed manually. Corrections are applied for instrument calibration, nonisotropic reflection, atmospheric interference, narrowband to broadband conversion, and normalization to a common solar zenith angle. The estimated albedos are relative, with the instrument gain set to give an albedo of 0.80 for ice floes in March and April. The mean values for the cloud-free portions of individual cells range from 0.18 to 0.91. Monthly averages of cells in the central Arctic range from 0.76 in April to 0.47 in August. The monthly averages of the within-cell standard deviations in the central Arctic are 0.04 in April and 0.06 in September. The surface albedo and surface temperature are correlated most strongly in March (R = -0.77) with little correlation in the summer. The monthly average lead fraction is determined from the mean potential open water, a scaled representation of the temperature or albedo between 0.0 (for ice) and 1.0 (for water); in the central Arctic it rises from an average 0.025 in the spring to 0.06 in September. Sparse data on aerosols, ozone, and water vapor in the atmospheric column contribute uncertainties to instantaneous, area-average albedos of 0.13, 0.04, and 0.08. Uncertainties in monthly average albedos are not this large. Contemporaneous estimation of these variables could reduce the uncertainty in the estimated albedo considerably. The poor calibration of AVHRR channels 1 and 2 is another large impediment to making accurate albedo estimates.

  2. GHRSST Level 2P USA NAVOCEANO AVHRR METOP-A Global SST:1

    Data.gov (United States)

    National Aeronautics and Space Administration — Multi-Channel SST retreivals generated in real-time from METOP-A AVHRR Global Area Coverage data. Used operationally in Navy oceanographic analyses and forecasts.

  3. Quantitative Assessment of Aflatoxin (AFM1) in Milk Collected from Dairy Farms in Faisalabad, Pakistan

    International Nuclear Information System (INIS)

    Sajid, M.W.; Randhawa, M.A.; Zahoor, T.; Sultan, J.I.

    2015-01-01

    Milk contamination with aflatoxin (AFM1) is an issue of great concern in developing countries like Pakistan which demands a great attention. Milk constitutes an important part of human diet, particularly for the youngs. So, it is our utmost need to assess the presence of AFM1 in milk. In the present study assessment of AFM1 in milk collected from different dairy farms of Faisalabad was carried out using High Performance Liquid Chromatography (HPLC) equipped with Fluorescence detector. The results were compared with pre-established maximum residual limit (MRL) in order to evaluate the safety of milk for human consumption. The study revealed that all the 50 tested samples were found positive for AFM1 contamination at various levels. Among buffalo dairy farms concentration of AFM1 ranged between 0.0513 λg L-1 and 0.1006 μg L-1. From the cow dairy farms, the AFM1 contamination level was found lowest with a mean of 0.0397 μg L-1 and the highest AFM1 contamination level was with a mean of 0.1143 μg L-1. Overall percentage of AFM1 contamination and concentration levels were found higher in the milk collected from buffalo dairy farms as compared to cow dairy farms. 21 out of 25 (84 percentage) buffalo and 18 out of 25 (72 percentage) cow milk samples were exceeded the European Commission MRL of 0.050 mu g L-1. The results of the present study will be helpful for regulations implementation in order to minimize or avoid the AFM1 contamination in milk from the farms in the study area. (author)

  4. Evaluating operational AVHRR sea surface temperature data at the coastline using surfers

    Science.gov (United States)

    Brewin, Robert J. W.; de Mora, Lee; Billson, Oliver; Jackson, Thomas; Russell, Paul; Brewin, Thomas G.; Shutler, Jamie D.; Miller, Peter I.; Taylor, Benjamin H.; Smyth, Tim J.; Fishwick, James R.

    2017-09-01

    Sea surface temperature (SST) is an essential climate variable that can be measured routinely from Earth Observation (EO) with high temporal and spatial coverage. To evaluate its suitability for an application, it is critical to know the accuracy and precision (performance) of the EO SST data. This requires comparisons with co-located and concomitant in situ data. Owing to a relatively large network of in situ platforms there is a good understanding of the performance of EO SST data in the open ocean. However, at the coastline this performance is not well known, impeded by a lack of in situ data. Here, we used in situ SST measurements collected by a group of surfers over a three year period in the coastal waters of the UK and Ireland, to improve our understanding of the performance of EO SST data at the coastline. At two beaches near the city of Plymouth, UK, the in situ SST measurements collected by the surfers were compared with in situ SST collected from two autonomous buoys located ∼7 km and ∼33 km from the coastline, and showed good agreement, with discrepancies consistent with the spatial separation of the sites. The in situ SST measurements collected by the surfers around the coastline, and those collected offshore by the two autonomous buoys, were used to evaluate the performance of operational Advanced Very High Resolution Radiometer (AVHRR) EO SST data. Results indicate: (i) a significant reduction in the performance of AVHRR at retrieving SST at the coastline, with root mean square errors in the range of 1.0 to 2.0 °C depending on the temporal difference between match-ups, significantly higher than those at the two offshore stations (0.4 to 0.6 °C); (ii) a systematic negative bias in the AVHRR retrievals of approximately 1 °C at the coastline, not observed at the two offshore stations; and (iii) an increase in the root mean square error at the coastline when the temporal difference between match-ups exceeded three hours. Harnessing new solutions

  5. Retrieving near-global aerosol loading over land and ocean from AVHRR

    Science.gov (United States)

    Hsu, N. C.; Lee, J.; Sayer, A. M.; Carletta, N.; Chen, S.-H.; Tucker, C. J.; Holben, B. N.; Tsay, S.-C.

    2017-09-01

    The spaceborne advanced very high resolution radiometer (AVHRR) sensor data record is approaching 40 years, providing a crucial asset for studying long-term trends of aerosol properties regionally and globally. However, due to limitations of its channels' information content, aerosol optical depth (AOD) data from AVHRR over land are still largely lacking. In this paper, we describe a new physics-based algorithm to retrieve aerosol loading over both land and ocean from AVHRR for the first time. The over-land algorithm is an extension of our Sea-viewing Wide Field-of-view Sensor and Moderate Resolution Imaging Spectroradiometer (MODIS) Deep Blue algorithm, while a simplified version of our Satellite Ocean Aerosol Retrieval algorithm is used over ocean. We compare retrieved AVHRR AOD with that from MODIS on a daily and seasonal basis and find, in general, good agreement between the two. For the satellites with equatorial crossing times within 2 h of solar noon, the spatial coverage of the AVHRR aerosol product is comparable to that of MODIS, except over very bright arid regions (such as the Sahara), where the underlying surface reflectance at 630 nm reaches the critical surface reflectance. Based upon comparisons of the AVHRR AOD against Aerosol Robotic Network data, preliminary results indicate that the expected error confidence interval envelope is around ±(0.03 + 15%) over ocean and ±(0.05 + 25%) over land for this first version of the AVHRR aerosol products. Consequently, these new AVHRR aerosol products can contribute important building blocks for constructing a consistent long-term data record for climate studies.

  6. SST Anomaly, NOAA POES AVHRR, Casey and Cornillon Climatology, 0.1 degrees, Global

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA CoastWatch distributes SST anomaly data using a combination of the POES AVHRR Global Area Coverage data, and data from a climatological database by Casey and...

  7. Estimating solar radiation using NOAA/AVHRR and ground measurement data

    Science.gov (United States)

    Fallahi, Somayeh; Amanollahi, Jamil; Tzanis, Chris G.; Ramli, Mohammad Firuz

    2018-01-01

    Solar radiation (SR) data are commonly used in different areas of renewable energy research. Researchers are often compelled to predict SR at ground stations for areas with no proper equipment. The objective of this study was to test the accuracy of the artificial neural network (ANN) and multiple linear regression (MLR) models for estimating monthly average SR over Kurdistan Province, Iran. Input data of the models were two data series with similar longitude, latitude, altitude, and month (number of months) data, but there were differences between the monthly mean temperatures in the first data series obtained from AVHRR sensor of NOAA satellite (DS1) and in the second data series measured at ground stations (DS2). In order to retrieve land surface temperature (LST) from AVHRR sensor, emissivity of the area was considered and for that purpose normalized vegetation difference index (NDVI) calculated from channels 1 and 2 of AVHRR sensor was utilized. The acquired results showed that the ANN model with DS1 data input with R2 = 0.96, RMSE = 1.04, MAE = 1.1 in the training phase and R2 = 0.96, RMSE = 1.06, MAE = 1.15 in the testing phase achieved more satisfactory performance compared with MLR model. It can be concluded that ANN model with remote sensing data has the potential to predict SR in locations with no ground measurement stations.

  8. CLARA-A1: a cloud, albedo, and radiation dataset from 28 yr of global AVHRR data

    Directory of Open Access Journals (Sweden)

    K.-G. Karlsson

    2013-05-01

    Full Text Available A new satellite-derived climate dataset – denoted CLARA-A1 ("The CM SAF cLoud, Albedo and RAdiation dataset from AVHRR data" – is described. The dataset covers the 28 yr period from 1982 until 2009 and consists of cloud, surface albedo, and radiation budget products derived from the AVHRR (Advanced Very High Resolution Radiometer sensor carried by polar-orbiting operational meteorological satellites. Its content, anticipated accuracies, limitations, and potential applications are described. The dataset is produced by the EUMETSAT Climate Monitoring Satellite Application Facility (CM SAF project. The dataset has its strengths in the long duration, its foundation upon a homogenized AVHRR radiance data record, and in some unique features, e.g. the availability of 28 yr of summer surface albedo and cloudiness parameters over the polar regions. Quality characteristics are also well investigated and particularly useful results can be found over the tropics, mid to high latitudes and over nearly all oceanic areas. Being the first CM SAF dataset of its kind, an intensive evaluation of the quality of the datasets was performed and major findings with regard to merits and shortcomings of the datasets are reported. However, the CM SAF's long-term commitment to perform two additional reprocessing events within the time frame 2013–2018 will allow proper handling of limitations as well as upgrading the dataset with new features (e.g. uncertainty estimates and extension of the temporal coverage.

  9. Assessing land cover performance in Senegal, West Africa using 1-km integrated NDVI and local variance analysis

    Science.gov (United States)

    Budde, M.E.; Tappan, G.; Rowland, James; Lewis, J.; Tieszen, L.L.

    2004-01-01

    The researchers calculated seasonal integrated normalized difference vegetation index (NDVI) for each of 7 years using a time-series of 1-km data from the Advanced Very High Resolution Radiometer (AVHRR) (1992-93, 1995) and SPOT Vegetation (1998-2001) sensors. We used a local variance technique to identify each pixel as normal or either positively or negatively anomalous when compared to its surroundings. We then summarized the number of years that a given pixel was identified as an anomaly. The resulting anomaly maps were analysed using Landsat TM imagery and extensive ground knowledge to assess the results. This technique identified anomalies that can be linked to numerous anthropogenic impacts including agricultural and urban expansion, maintenance of protected areas and increased fallow. Local variance analysis is a reliable method for assessing vegetation degradation resulting from human pressures or increased land productivity from natural resource management practices. ?? 2004 Published by Elsevier Ltd.

  10. User's guide to image processing applications of the NOAA satellite HRPT/AVHRR data. Part 1: Introduction to the satellite system and its applications. Part 2: Processing and analysis of AVHRR imagery

    Science.gov (United States)

    Huh, Oscar Karl; Leibowitz, Scott G.; Dirosa, Donald; Hill, John M.

    1986-01-01

    The use of NOAA Advanced Very High Resolution Radar/High Resolution Picture Transmission (AVHRR/HRPT) imagery for earth resource applications is provided for the applications scientist for use within the various Earth science, resource, and agricultural disciplines. A guide to processing NOAA AVHRR data using the hardware and software systems integrated for this NASA project is provided. The processing steps from raw data on computer compatible tapes (1B data format) through usable qualitative and quantitative products for applications are given. The manual is divided into two parts. The first section describes the NOAA satellite system, its sensors, and the theoretical basis for using these data for environmental applications. Part 2 is a hands-on description of how to use a specific image processing system, the International Imaging Systems, Inc. (I2S) Model 75 Array Processor and S575 software, to process these data.

  11. a New Algorithm for the Aod Inversion from Noaa/avhrr Data

    Science.gov (United States)

    Sun, L.; Li, R.; Yu, H.

    2018-04-01

    The advanced very high resolution radiometer (AVHRR) data from the National Oceanic and Atmospheric Administration satellite is one of the earliest data applied in aerosol research. The dense dark vegetation (DDV) algorithm is a popular method for the present land aerosol retrieval. One of the most crucial steps in the DDV algorithm with AVHRR data is estimating the land surface reflectance (LSR). However, LSR cannot be easily estimated because of the lack of a 2.13 μm band. In this article, the moderate resolution imaging spectroradiometer (MODIS) vegetation index product (MYD13) is introduced to support the estimation of AVHRR LSR. The relationship between MODIS NDVI and the AVHRR LSR of the visible band is analysed to retrieve aerosol optical depth (AOD) from AVHRR data. Retrieval experiments are carried out in mid-eastern America. The AOD data from AErosol RObotic NETwork (AERONET) measurements are used to evaluate the aerosol retrieval from AVHRR data, the results indicate that about 74 % of the retrieved AOD are within the expected error range of ±(0.05 + 0.2), and a cross comparison of the AOD retrieval results with the MODIS aerosol product (MYD04) shows that the AOD datasets have a similar spatial distribution.

  12. Monitoring of wildfires in boreal forests using large area AVHRR NDVI composite image data

    International Nuclear Information System (INIS)

    Kasischke, E.S.; French, N.H.F.; Harrell, P.; Christensen, N.L. Jr.; Ustin, S.L.; Barry, D.

    1993-01-01

    Normalized difference vegetation index (NDVI) composite image data, produced from AVHRR data collected in 1990, were evaluated for locating and mapping the areal extent of wildfires in the boreal forests of Alaska during that year. A technique was developed to map forest fire boundaries by subtracting a late-summer AVHRR NDVI image from an early summer scene. The locations and boundaries of wildfires within the interior region of Alaska were obtained from the Alaska Fire Service, and compared to the AVHRR-derived fire-boundary map. It was found that AVHRR detected 89.5% of all fires with sizes greater than 2,000ha with no false alarms and that, for most cases, the general shape of the fire boundary detected by AVHRR matched those mapped by field observers. However, the total area contained within the fire boundaries mapped by AVHRR were only 61% of those mapped by the field observers. However, the AVHRR data used in this study did not span the entire time period during which fires occurred, and it is believed the areal estimates could be improved significantly if an expanded AVHRR data set were used

  13. NOAA Climate Data Record (CDR) of AVHRR Polar Pathfinder (APP) Cryosphere

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This NOAA Climate Data Record (CDR) contains the AVHRR Polar Pathfinder (APP) product. APP is a fundamental CDR comprised of calibrated and navigated AVHRR channel...

  14. Analysis of aflatoxin M1 in milk and yogurt and AFM1 reduction by lactic acid bacteria used in Lebanese industry

    International Nuclear Information System (INIS)

    El Khoury, A.; Yaghi, J.; Atoui, A.

    2011-01-01

    In this study a screening survey was undertaken to determine the presence and levels of aflatoxin M1 (AFM1) in locally produced dairy products. For this purpose, a total of 138 dairy samples (milk and yogurt) were analyzed to quantify AFM1 levels in these products. Results obtained showed that AFM1 was found in 40.62% and 32.81% of milk and yogurt samples respectively. The range of contamination levels varied between lower and higher than European regulation limit. Lactic acid bacteria (Lactobacillus bulgaricus and Streptococcus thermophilus) used in the Lebanese traditional industry were screened for their ability to reduce the level of AFM1. Due to the lack in data on the natural occurrence of AFM1 in Lebanese dairy products, the aim of this work was to report some information and to state these products according to EC regulations. (author)

  15. Mapeamento da temperatura da superfície terrestre com uso do sensor AVHRR/NOAA Mapping land surface temperature using AVHRR/NOAA sensor

    Directory of Open Access Journals (Sweden)

    Aníbal Gusso

    2007-02-01

    Full Text Available O objetivo deste trabalho foi avaliar a adequação do uso do sensor AVHRR/NOAA (Advanced Very High Resolution Radiometer/National Oceanic and Atmospheric Administration para mapeamento da temperatura da superfície terrestre (TST no Estado do Rio Grande do Sul, por meio da comparação entre três algoritmos clássicos. Foram comparados os métodos de Becker & Li, Sobrino et al. e Kerr et al. para estimativa das TST mínimas, utilizando imagens noturnas e logo após o amanhecer. Os dados de emissividade e TST foram obtidos por meio de combinações matemáticas da radiação detectada nas faixas do visível, infravermelho próximo e termal do sensor AVHRR/NOAA. O sensor AVHRR é adequado para o mapeamento de TST para as condições do tipo de cobertura do solo que predominam no Rio Grande do Sul, visto que a TST estimada pelos três métodos testados foi próxima à temperatura do ar medida nos locais selecionados. O método de Sobrino et al. foi o mais adequado.The objective of this work was to evaluate the suitable use of AVHRR/NOAA (Advanced Very High Resolution Radiometer/National Oceanic and Atmospheric Administration on land surface temperature (LST mapping in Rio Grande do Sul State by means of the comparison of three classic algorithms. The methods of Becker & Li, Sobrino et al. and Kerr et al. were compared for the minimum LST estimation, using nocturnal and predawn images. Both emissivity and LST data were obtained by means of mathematical combinations of the visible, near-infrared and thermal detected radiation of the AVHRR/NOAA sensor. The AVHRR sensor is suitable for LST mapping for the overall conditions of soil coverage in Rio Grande do Sul, once the estimated LST, by the three tested methods, was close to the measured air temperature at the selected locations. Sobrino et al. was the most adequate method.

  16. Monitoring natural vegetation in Southern Greenland using NOAA AVHRR and field measurements

    DEFF Research Database (Denmark)

    Hansen, Birger Ulf

    1991-01-01

    vegetation, sheep farming, biomass production, Remote Sensing, NOAA AVHRR, Southern Greenland, NDVI......vegetation, sheep farming, biomass production, Remote Sensing, NOAA AVHRR, Southern Greenland, NDVI...

  17. Daytime Low Stratiform Cloud Detection on AVHRR Imagery

    Directory of Open Access Journals (Sweden)

    Jan Pawel Musial

    2014-06-01

    Full Text Available The near-real time retrieval of low stratiform cloud (LSC coverage is of vital interest for such disciplines as meteorology, transport safety, economy and air quality. Within this scope, a novel methodology is proposed which provides the LSC occurrence probability estimates for a satellite scene. The algorithm is suited for the 1 × 1 km Advanced Very High Resolution Radiometer (AVHRR data and was trained and validated against collocated SYNOP observations. Utilisation of these two combined data sources requires a formulation of constraints in order to discriminate cases where the LSC is overlaid by higher clouds. The LSC classification process is based on six features which are first converted to the integer form by step functions and combined by means of bitwise operations. Consequently, a set of values reflecting a unique combination of those features is derived which is further employed to extract the LSC occurrence probability estimates from the precomputed look-up vectors (LUV. Although the validation analyses confirmed good performance of the algorithm, some inevitable misclassification with other optically thick clouds were reported. Moreover, the comparison against Polar Platform System (PPS cloud-type product revealed superior classification accuracy. From the temporal perspective, the acquired results reported a presence of diurnal and annual LSC probability cycles over Europe.

  18. AVHRR-based drought-observing system for monitoring the environment and socioeconomic activities

    Science.gov (United States)

    Kogan, F.

    From all natural disaster, drought is the least understandable and the most damaging environmental phenomenon. Although in pre-satellite era, climate data were used for drought monitoring, drought specifics created problems in early drought detection start/end, monitoring its expansion/contraction, intensity and area coverage and the most important, timely estimation of the impacts on the environment and socioeconomic activities. The latest prevented to take prompt measures in mitigating negative consequences of drought for the society. Advances in remote sensing of the past ten years, contributed to the development of comprehensive drought monitoring system and numerous applications, which helped to make decisions for monitoring the environment and predicting sustainable socioeconomic activities. This paper discusses satellite-based land-surface observing system, which provides wells of information used for monitoring such unusual natural disaster as drought. This system was developed from the observations of the Advanced Very High Resolution Radiometer (AVHRR) flown on NOAA operational polar-orbiting satellites. The AVHRR data were packed into the Global Vegetation Index (GVI) product, which have served the global community since 1981. The GVI provided reflectances and indices (4 km spacial resolution) every seven days for each 16 km map cell between 75EN and 55ES covering all land ecosystems. The data includes raw and calibrated radiances in the visible, near infrared and infrared spectral bands, processed (with eliminated high frequency noise) radiances, normalized difference vegetation index (NDVI), 20-year climatology, vegetation condition indices and also products, such as vegetation health, drought, vegetation fraction, fire risk etc. In the past ten years, users around the world used this information addressing different issues of drought impacts on socioeconomic activities and responded positively to real time drought information place regularly on the

  19. Surface radiant flux densities inferred from LAC and GAC AVHRR data

    Science.gov (United States)

    Berger, F.; Klaes, D.

    To infer surface radiant flux densities from current (NOAA-AVHRR, ERS-1/2 ATSR) and future meteorological (Envisat AATSR, MSG, METOP) satellite data, the complex, modular analysis scheme SESAT (Strahlungs- und Energieflüsse aus Satellitendaten) could be developed (Berger, 2001). This scheme allows the determination of cloud types, optical and microphysical cloud properties as well as surface and TOA radiant flux densities. After testing of SESAT in Central Europe and the Baltic Sea catchment (more than 400scenes U including a detailed validation with various surface measurements) it could be applied to a large number of NOAA-16 AVHRR overpasses covering the globe.For the analysis, two different spatial resolutions U local area coverage (LAC) andwere considered. Therefore, all inferred results, like global area coverage (GAC) U cloud cover, cloud properties and radiant properties, could be intercompared. Specific emphasis could be made to the surface radiant flux densities (all radiative balance compoments), where results for different regions, like Southern America, Southern Africa, Northern America, Europe, and Indonesia, will be presented. Applying SESAT, energy flux densities, like latent and sensible heat flux densities could also be determined additionally. A statistical analysis of all results including a detailed discussion for the two spatial resolutions will close this study.

  20. 4 km NODC/RSMAS AVHRR Pathfinder v5 Seasonal and Annual Day-Night Sea Surface Temperature Climatologies for 1982-2009 for the Gulf of Mexico (NODC Accession 0072888)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This accession contains a set of sea surface temperature climatologies for the Gulf of Mexico (GOM), derived from the AVHRR Pathfinder Version 5 sea surface...

  1. RSCAT_LEVEL_2B_OWV_COMP_12_V1.1:1

    Data.gov (United States)

    National Aeronautics and Space Administration — This dataset contains the RapidScat Level 2B 12.5km Version 1.1 science-quality ocean surface wind vectors. The Level 2B wind vectors are binned on a 12.5 km Wind...

  2. Development of digital interactive processing system for NOAA satellites AVHRR data

    Science.gov (United States)

    Gupta, R. K.; Murthy, N. N.

    The paper discusses the digital image processing system for NOAA/AVHRR data including Land applications - configured around VAX 11/750 host computer supported with FPS 100 Array Processor, Comtal graphic display and HP Plotting devices; wherein the system software for relational Data Base together with query and editing facilities, Man-Machine Interface using form, menu and prompt inputs including validation of user entries for data type and range; preprocessing software for data calibration, Sun-angle correction, Geometric Corrections for Earth curvature effect and Earth rotation offsets and Earth location of AVHRR image have been accomplished. The implemented image enhancement techniques such as grey level stretching, histogram equalization and convolution are discussed. The software implementation details for the computation of vegetative index and normalized vegetative index using NOAA/AVHRR channels 1 and 2 data together with output are presented; scientific background for such computations and obtainability of similar indices from Landsat/MSS data are also included. The paper concludes by specifying the further software developments planned and the progress envisaged in the field of vegetation index studies.

  3. OMI/Aura DOAS Total Column Ozone Zoomed 1-Orbit L2 Swath 13x12km V003

    Data.gov (United States)

    National Aeronautics and Space Administration — The reprocessed OMI/Aura Level-2 Zoomed Ozone data product OMDOAO3Z at 13x12 km resolution is now available (http://disc.gsfc.nasa.gov/Aura/OMI/omdoao3z_v003.shtml )...

  4. SAFARI 2000 Land Cover from AVHRR, 8-km, 1984 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set consists of a southern African subset of the University of Maryland (UMD) 8-km Global Land Cover product in ASCII GRID and binary image files formats.

  5. SAFARI 2000 Land Cover from AVHRR, 8-km, 1984 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set consists of a southern African subset of the University of Maryland (UMD) 8-km Global Land Cover product in ASCII GRID and binary image files...

  6. LBA Regional Land Cover from AVHRR, 8-km, 1984 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set is a subset of an 8-km global land cover product (DeFries et al. 1998). This subset was created for the study area of the Large Scale...

  7. LBA Regional Land Cover from AVHRR, 8-km, 1984 (DeFries et al.)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: This data set is a subset of an 8-km global land cover product (DeFries et al. 1998). This subset was created for the study area of the Large Scale...

  8. Simulated structure and imaging of NTCDI on Si(1 1 1)-7 × 7 : a combined STM, NC-AFM and DFT study

    Science.gov (United States)

    Jarvis, S. P.; Sweetman, A. M.; Lekkas, I.; Champness, N. R.; Kantorovich, L.; Moriarty, P.

    2015-02-01

    The adsorption of naphthalene tetracarboxylic diimide (NTCDI) on Si(111)-7 × 7 is investigated through a combination of scanning tunnelling microscopy (STM), noncontact atomic force microscopy (NC-AFM) and density functional theory (DFT) calculations. We show that NTCDI adopts multiple planar adsorption geometries on the Si(111)-7 × 7 surface which can be imaged with intramolecular bond resolution using NC-AFM. DFT calculations reveal adsorption is dominated by covalent bond formation between the molecular oxygen atoms and the surface silicon adatoms. The chemisorption of the molecule is found to induce subtle distortions to the molecular structure, which are observed in NC-AFM images.

  9. 56 Gb/s DMT transmission with VCSELs in 1.5 um wavelength range over up to 12 km for DWDM intra-data center connects

    DEFF Research Database (Denmark)

    Dochhan, Annika; Eiselt, Nicklas; Hohenleitner, Robert

    2016-01-01

    We demonstrate up to 12 km, 56 Gb/s DMT transmission using high-speed VCSELs in the 1.5 um wavelength range for future 400Gb/s intra-data center connects, enabled by vestigial sideband filtering of the transmit signal....

  10. AVHRR Leads-ARI Polar Gridded Brightness Temperatures

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set consists of AVHRR imagery selected from hard copy 'quick look' images to provide the best coverage possible over the Arctic approximately every three...

  11. NOAA Climate Data Record (CDR) of Visible and Near Infrared Reflectance from AVHRR, Version 1.0

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The AVHRR visible gains and offsets convert GAC pixel level counts to radiances and are provided for each visible band encompassing TIROS-N, NOAA-6 through NOAA-19...

  12. OMI/Aura Aerosol product Multi-wavelength Algorithm Zoomed 1-Orbit L2 Swath 13x12km V003

    Data.gov (United States)

    National Aeronautics and Space Administration — The reprocessed OMI/Aura Level-2 Zoomed Aerosol data product OMAEROZ at 13x12 km resolution has been made available from the NASA Goddard Earth Sciences Data and...

  13. PREFACE: Non-contact AFM Non-contact AFM

    Science.gov (United States)

    Giessibl, Franz J.; Morita, Seizo

    2012-02-01

    This special issue is focussed on high resolution non-contact atomic force microscopy (AFM). Non-contact atomic force microscopy was established approximately 15 years ago as a tool to image conducting and insulating surfaces with atomic resolution. Since 1998, an annual international conference has taken place, and although the proceedings of these conferences are a useful source of information, several key developments warrant devoting a special issue to this subject. In the theoretic field, the possibility of supplementing established techniques such as scanning tunneling microscopy (STM) and Kelvin probe microscopy with atomically resolved force micrsoscopy poses many challenges in the calculation of contrast and contrast reversal. The surface science of insulators, self-assembled monolayers and adsorbates on insulators is a fruitful field for the application of non-contact AFM: several articles in this issue are devoted to these subjects. Atomic imaging and manipulation have been pioneered using STM, but because AFM allows the measurement of forces, AFM has had a profound impact in this field as well. Three-dimensional force spectroscopy has allowed many important insights into surface science. In this issue a combined 3D tunneling and force microscopy is introduced. Non-contact AFM typically uses frequency modulation to measure force gradients and was initially used mainly in a vacuum. As can be seen in this issue, frequency modulation is now also used in ambient conditions, allowing better spatial and force resolution. We thank all of the contributors for their time and efforts in making this special issue possible. We are also very grateful to the staff of IOP Publishing for handling the administrative aspects and for steering the refereeing process. Non-contact AFM contents Relation between the chemical force and the tunnelling current in atomic point contacts: a simple model Pavel Jelínek, Martin Ondrácek and Fernando Flores Theoretical simulation of

  14. Ground state properties of the bond alternating spin-1/2 anisotropic Heisenberg chain

    Directory of Open Access Journals (Sweden)

    S. Paul

    2017-06-01

    Full Text Available Ground state properties, dispersion relations and scaling behaviour of spin gap of a bond alternating spin-1/2 anisotropic Heisenberg chain have been studied where the exchange interactions on alternate bonds are ferromagnetic (FM and antiferromagnetic (AFM in two separate cases. The resulting models separately represent nearest neighbour (NN AFM-AFM and AFM-FM bond alternating chains. Ground state energy has been estimated analytically by using both bond operator and Jordan-Wigner representations and numerically by using exact diagonalization. Dispersion relations, spin gap and several ground state orders have been obtained. Dimer order and string orders are found to coexist in the ground state. Spin gap is found to develop as soon as the non-uniformity in alternating bond strength is introduced in the AFM-AFM chain which further remains non-zero for the AFM-FM chain. This spin gap along with the string orders attribute to the Haldane phase. The Haldane phase is found to exist in most of the anisotropic region similar to the isotropic point.

  15. Evaluation of AVHRR Aerosol Properties Over Mainland China from Deepblue Algorithm

    Science.gov (United States)

    Xue, Y.; Che, Y.; She, L.

    2017-12-01

    Advanced Very High Resolution Radiometer (AVHRR) on-board NOAA series satellites is the only operational senor which keeps observing surface of the Earth and cloud over 30 years since 1979. Such long time coverage helps to expand the application of AVHRR to aerosol properties retrieval over both land and ocean successfully. Recently in 2017, the Deep Blue Project has published AVHRR `Deep Blue' dataset version 001 (V001) using `Deep Blue (DB)' algorithm(Sayer et al., 2017). This dataset includes not only aerosol properties over land but also oceanic aerosol product at three periods (NOAA-11: 1989-1990, NOAA-14: 1995-1999, NOAA-18: 2006-2011). We pay much of our attention to DB's performance over mainland China. Therefore, in the presenting paper, we focus on validating AVHRR/DB dataset over different land covers in China in 2007, 2008 and 2010. Both of data from ground-based networks from the Aerosol Robotic NETwork (AERONET) and China Aerosol Remote Sensing Network (CARSNET) are used as reference data. The collocation method is to match data at a time range of of satellite pass-by and at a spatial frame of pixels around ground-based site. Totally, data from 18 AERONET and 25 CARSNET are used as shown in figure, collocating 922 matches with AERONET and 2325 matches with CARSNET. Additionally, we introduced a corrected RMS error as main evaluation metric. As a result, AVHRR/DB underestimates AOD increasingly and more uncertainties and errors will be introduced with the growth of AOD. Otherwise, the performance of AVHRR/DB are better compared with AERONET data than with CARSNET data from RMSbc of 0.35 vs. 0.42. Their Rs (0.757 vs. 0.654) prove this characteristic too. For urban areas, the performances in Beijing are better than that in Xi'an from RMSbc, otherwise RMS in Xi'an (0.324) is lower than others' (0.346 and 0.383) mainly because of small AOD observed range and low R (0.624). For croplands, those performances are at same levels with RMSbc from 0.312 to 0

  16. Global validation of two-channel AVHRR aerosol optical thickness retrievals over the oceans

    International Nuclear Information System (INIS)

    Liu Li; Mishchenko, Michael I.; Geogdzhayev, Igor; Smirnov, Alexander; Sakerin, Sergey M.; Kabanov, Dmitry M.; Ershov, Oleg A.

    2004-01-01

    The paper presents validation results for the aerosol optical thickness derived by applying a two-channel retrieval algorithm to Advanced Very High Resolution Radiometer (AVHRR) radiance data. The satellite retrievals are compared with ship-borne sun-photometer results. The comparison of spatial and temporal statistics of the AVHRR results and the ship measurements shows a strong correlation. The satellite retrieval results obtained with the original algorithm for a wavelength of 0.55μm are systematically higher than the sun-photometer measurements in the cases of low aerosol loads. The ensemble averaged satellite-retrieved optical thickness overestimates the ensemble averaged sun-photometer data by about 11% with a random error of about 0.04. Increasing the diffuse component of the ocean surface reflectance from 0.002 to 0.004 in the AVHRR algorithm produces a better match, with the ensemble-averaged AVHRR-retrieved optical thickness differing by only about 3.6% from the sun-photometer truth and having a small offset of 0.03

  17. Long-term record of top-of-atmosphere albedo generated from AVHRR data

    Science.gov (United States)

    Song, Z.

    2017-12-01

    Top-of-Atmosphere (TOA) albedo is a fundamental component of Earth's energy budget. Previously, long-term accurate TOA albedo products did not exist due to the lack of stable broadband observations. With a new albedo estimation methodology based on multispectral observations, TOA albedo since 1981 has been retrieved using data from the Advanced Very High Resolution Radiometer (AVHRR), which provides the longest record of satellite observations across the globe. To develop the long-term TOA albedo record, the instantaneous TOA albedo was calculated by the direct estimation method, which was built on training data pairs from coincident AVHRR TOA reflectance and Moderate Resolution Imaging Spectroradiometer (MODIS) TOA albedo. The instantaneous TOA albedo was then converted to daily mean and monthly mean albedo based on the diurnal curves from geostationary satellites. The TOA albedo results (AVHRR-TAL) were compared with Clouds and the Earth's Radiant Energy System (CERES) flux products for 2007. The monthly mean AVHRR-TAL agreed well with the CERES products, with a root mean square difference (RMSD) of 0.032 and a bias of 0.013. In addition, AVHRR-TAL showed similar seasonal variations to those seen in the CERES products. Further analysis on long-term time series showed good consistency between the two datasets (R2 > 0.95 and relative RMSD < 4%) from 2000 to 2015. Although some calibration issues remain to be solved, our datasets show the potential ability to observe the global TOA albedo from 1981 to the present.

  18. Long time-series of turbid coastal water using AVHRR: an example from Florida Bay, USA

    Science.gov (United States)

    Stumpf, Richard P.; Frayer, M. L.

    1997-02-01

    The AVHRR can provide information on the reflectance of turbid case II water, permitting examination of large estuaries and plumes from major rivers. The AVHRR has been onboard several NOAA satellites, with afternoon overpasses since 1981, offering a long time-series to examine changes in coastal water. We are using AVHRR data starting in December 1989, to examine water clarity in Florida Bay, which has undergone a decline since the late 1980's. The processing involves obtaining a nominal reflectance for red light with standard corrections including those for Rayleigh and aerosol path radiances. Established relationships between reflectance and the water properties being measured in the Bay provide estimates of diffuse attenuation and light limitation for phytoplankton and seagrass productivity studies. Processing also includes monthly averages of reflectance and attenuation. The AVHRR data set describes spatial and temporal patterns, including resuspension of bottom sediments in the winter, and changes in water clarity. The AVHRR also indicates that Florida Bay has much higher reflectivity relative to attenuation than other southeastern US estuaries.

  19. SST algorithms in ACSPO reanalysis of AVHRR GAC data from 2002-2013

    Science.gov (United States)

    Petrenko, B.; Ignatov, A.; Kihai, Y.; Zhou, X.; Stroup, J.

    2014-05-01

    In response to a request from the NOAA Coral Reef Watch Program, NOAA SST Team initiated reprocessing of 4 km resolution GAC data from AVHRRs flown onboard NOAA and MetOp satellites. The objective is to create a longterm Level 2 Advanced Clear-Sky Processor for Oceans (ACSPO) SST product, consistent with NOAA operations. ACSPO-Reanalysis (RAN) is used as input in the NOAA geo-polar blended Level 4 SST and potentially other Level 4 SST products. In the first stage of reprocessing (reanalysis 1, or RAN1), data from NOAA-15, -16, -17, -18, -19, and Metop-A and -B, from 2002-present have been processed with ACSPO v2.20, and matched up with quality controlled in situ data from in situ Quality Monitor (iQuam) version 1. The ~12 years time series of matchups were used to develop and explore the SST retrieval algorithms, with emphasis on minimizing spatial biases in retrieved SSTs, close reproduction of the magnitudes of true SST variations, and maximizing temporal, spatial and inter-platform stability of retrieval metrics. Two types of SST algorithms were considered: conventional SST regressions, and recently developed incremental regressions. The conventional equations were adopted in the EUMETSAT OSI-SAF formulation, which, according to our previous analyses, provide relatively small regional biases and well-balanced combination of precision and sensitivity, in its class. Incremental regression equations were specifically elaborated to automatically correct for model minus observation biases, always present when RTM simulations are employed. Improved temporal stability was achieved by recalculation of SST coefficients from matchups on a daily basis, with a +/-45 day window around the current date. This presentation describes the candidate SST algorithms considered for the next round of ACSPO reanalysis, RAN2.

  20. Association between Urinary Aflatoxin (AFM1 and Dietary Intake among Adults in Hulu Langat District, Selangor, Malaysia

    Directory of Open Access Journals (Sweden)

    Siti Husna Sulaiman

    2018-04-01

    Full Text Available Aflatoxin is a food contaminant and its exposure through the diet is frequent and ubiquitous. A long-term dietary aflatoxin exposure has been linked to the development of liver cancer in populations with high prevalence of aflatoxin contamination in foods. Therefore, this study was conducted to identify the association between urinary aflatoxin M1 (AFM1, a biomarker of aflatoxin exposure, with the dietary intake among adults in Hulu Langat district, Selangor, Malaysia. Certain food products have higher potential for aflatoxin contamination and these were listed in a Food Frequency Questionnaire, which was given to all study participants. This allowed us to record consumption rates for each food product listed. Concomitantly, urine samples were collected, from adults in selected areas in Hulu Langat district, for the measurement of AFM1 levels using an ELISA kit. Of the 444 urine samples collected and tested, 199 were positive for AFM1, with 37 of them exceeding the limit of detection (LOD of 0.64 ng/mL. Cereal products showed the highest consumption level among all food groups, with an average intake of 512.54 g per day. Chi-square analysis showed that consumption of eggs (X2 = 4.77, p = 0.03 and dairy products (X2 = 19.36, p < 0.01 had significant associations with urinary AFM1 but both food groups were having a phi and Cramer’s V value that less than 0.3, which indicated that the association between these food groups’ consumption and AFM1 level in urine was weak.

  1. tRNA conjugation with chitosan nanoparticles: An AFM imaging study.

    Science.gov (United States)

    Agudelo, D; Kreplak, L; Tajmir-Riahi, H A

    2016-04-01

    The conjugation of tRNA with chitosan nanoparticles of different sizes 15,100 and 200 kDa was investigated in aqueous solution using multiple spectroscopic methods and atomic force microscopy (AFM). Structural analysis showed that chitosan binds tRNA via G-C and A-U base pairs as well as backbone PO2 group, through electrostatic, hydrophilic and H-bonding contacts with overall binding constants of KCh-15-tRNA=4.1 (±0.60)×10(3)M(-1), KCh-100-tRNA=5.7 (±0.8)×10(3)M(-1) and KCh-200-tRNA=1.2 (±0.3)×10(4)M(-1). As chitosan size increases more stable polymer-tRNA conjugate is formed. AFM images showed major tRNA aggregation and particle formation occurred as chitosan concentration increased. Even though chitosan induced major biopolymer structural changes, tRNA remains in A-family structure. Copyright © 2015 Elsevier B.V. All rights reserved.

  2. Application of principal component analysis and information fusion technique to detect hotspots in NOAA/AVHRR images of Jharia coalfield, India - article no. 013523

    Energy Technology Data Exchange (ETDEWEB)

    Gautam, R.S.; Singh, D.; Mittal, A. [Indian Institute of Technology Roorkee, Roorkee (India)

    2007-07-01

    Present paper proposes an algorithm for hotspot (sub-surface fire) detection in NOAA/AVHRR images in Jharia region of India by employing Principal Component Analysis (PCA) and fusion technique. Proposed technique is very simple to implement and is more adaptive in comparison to thresholding, multi-thresholding and contextual algorithms. The algorithm takes into account the information of AVHRR channels 1, 2, 3, 4 and vegetation indices NDVI and MSAVI for the required purpose. Proposed technique consists of three steps: (1) detection and removal of cloud and water pixels from preprocessed AVHRR image and screening out the noise of channel 3, (2) application of PCA on multi-channel information along with vegetation index information of NOAA/AVHRR image to obtain principal components, and (3) fusion of information obtained from principal component 1 and 2 to classify image pixels as hotspots. Image processing techniques are applied to fuse information in first two principal component images and no absolute threshold is incorporated to specify whether particular pixel belongs to hotspot class or not, hence, proposed method is adaptive in nature and works successfully for most of the AVHRR images with average 87.27% detection accuracy and 0.201% false alarm rate while comparing with ground truth points in Jharia region of India.

  3. The precision of the NDVI derived from AVHRR observations

    International Nuclear Information System (INIS)

    Roderick, M.; Smith, R.; Cridland, S.

    1996-01-01

    Vegetation studies using NOAA-AVHRR data have tended to focus on the use of the normalized difference vegetation index (NDVI). This unitless index is computed using near-infrared and red reflectances, and thus has both an accuracy and precision. This article reports on a formal statistical framework for assessing the precision of the NDVI derived from NOAA-AVHRR observations. The framework is based on the “best possible” precision concept, which assumes that signal quantization is the only source of observational error. While the radiance resolution of a spectral observation is essentially fixed by the instrument characteristics, the reflectance resolution is the radiance resolution divided by the cosine of the solar zenith angle. Using typical solar zenith angles for AVHRR image acquisitions over Australia, ± 0.01 NDVI units is typically with “best possible” precision attainable in the NDVI, although this degrades significantly over dark targets, and at large solar zenith angles. Transforming the computed NDVI into a single byte for disk storage results in little or no loss of precision. The framework developed in this article can be adapted to estimate the “best possible” precision of other vegetation indices derived using data from other remote sensing satellites. (author)

  4. Characterization of the Cloud-Topped Boundary Layer at the Synoptic Scale Using AVHRR Observations during the SEMAPHORE Experiment.

    Science.gov (United States)

    Mathieu, A.; Sèze, G.; Lahellec, A.; Guerin, C.; Weill, A.

    2003-12-01

    Satellite platforms NOAA-11 and -12 Advanced Very High Resolution Radiometer (AVHRR) data are used during the daytime to study large sheets of stratocumulus over the North Atlantic Ocean. The application concerns an anticyclonic period of the Structure des Echanges Mer Atmosphère, Propriétés des Hétérogénéités Océaniques: Recherché Expérimentale (SEMAPHORE) campaign (10 17 November 1993). In the region of interest, the satellite images are recorded under large solar zenith angles. Extending the SEMAPHORE area, a region of about 3000 × 3000 km2 is studied to characterize the atmospheric boundary layer. A statistical cloud classification method is applied to discriminate for low-level and optically thick clouds. For AVHRR pixels covered with thick clouds, brightness temperatures are used to evaluate the boundary layer cloud-top temperature (CTT). The objective is to obtain accurate CTT maps for evaluation of a global model. In this application, the full-resolution fields are reduced to match model grid size. An estimate of overall temperature uncertainty associated with each grid point is also derived, which incorporates subgrid variability of the fields and quality of the temperature retrieval. Results are compared with the SEMAPHORE campaign measurements. A comparison with “DX” products obtained with the same dataset, but at lower resolution, is also presented. The authors claim that such instantaneous CTT maps could be as intensively used as classical SST maps, and both could be efficiently complemented with gridpoint error-bar maps. They may be used for multiple applications: (i) to provide a means to improve numerical weather prediction and climatological reanalyses, (ii) to represent a boundary layer global characterization to analyze the synoptic situation of field experiments, and (iii) to allow validation and to test development of large-scale and mesoscale models.

  5. EUV blank defect and particle inspection with high throughput immersion AFM with 1nm 3D resolution

    NARCIS (Netherlands)

    Es, M.H. van; Sadeghian Marnani, H.

    2016-01-01

    Inspection of EUV mask substrates and blanks is demanding. We envision this is a good target application for massively parallel Atomic Force Microscopy (AFM). We envision to do a full surface characterization of EUV masks with AFM enabling 1nm true 3D resolution over the entire surface. The limiting

  6. High accuracy FIONA-AFM hybrid imaging

    International Nuclear Information System (INIS)

    Fronczek, D.N.; Quammen, C.; Wang, H.; Kisker, C.; Superfine, R.; Taylor, R.; Erie, D.A.; Tessmer, I.

    2011-01-01

    Multi-protein complexes are ubiquitous and play essential roles in many biological mechanisms. Single molecule imaging techniques such as electron microscopy (EM) and atomic force microscopy (AFM) are powerful methods for characterizing the structural properties of multi-protein and multi-protein-DNA complexes. However, a significant limitation to these techniques is the ability to distinguish different proteins from one another. Here, we combine high resolution fluorescence microscopy and AFM (FIONA-AFM) to allow the identification of different proteins in such complexes. Using quantum dots as fiducial markers in addition to fluorescently labeled proteins, we are able to align fluorescence and AFM information to ≥8 nm accuracy. This accuracy is sufficient to identify individual fluorescently labeled proteins in most multi-protein complexes. We investigate the limitations of localization precision and accuracy in fluorescence and AFM images separately and their effects on the overall registration accuracy of FIONA-AFM hybrid images. This combination of the two orthogonal techniques (FIONA and AFM) opens a wide spectrum of possible applications to the study of protein interactions, because AFM can yield high resolution (5-10 nm) information about the conformational properties of multi-protein complexes and the fluorescence can indicate spatial relationships of the proteins in the complexes. -- Research highlights: → Integration of fluorescent signals in AFM topography with high (<10 nm) accuracy. → Investigation of limitations and quantitative analysis of fluorescence-AFM image registration using quantum dots. → Fluorescence center tracking and display as localization probability distributions in AFM topography (FIONA-AFM). → Application of FIONA-AFM to a biological sample containing damaged DNA and the DNA repair proteins UvrA and UvrB conjugated to quantum dots.

  7. G1SST, 1km blended SST

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A daily, global Sea Surface Temperature (SST) data set is produced at 1-km (also known as ultra-high resolution) by the JPL ROMS (Regional Ocean Modeling System)...

  8. Contrail observations from space using NOAA-AVHRR data

    Energy Technology Data Exchange (ETDEWEB)

    Mannstein, H. [Deutsche Forschungsanstalt fuer Luft- und Raumfahrt e.V. (DLR), Oberpfaffenhofen (Germany). Inst. fuer Physik der Atmosphaere

    1997-12-31

    The infrared channels of the Advanced Very High Resolution Radiometer (AVHRR) onboard of the weather satellites of the NOAA series allow the detection of contrails. An automated detection scheme is described and tested against computer aided visual classifications by two experts. The algorithm seems to identify contrails within the satellite data with a skill comparable to the human observers. Clusters of contrails within the satellite images are connected to outline regions where the atmospheric properties are favourable for the existence of observable contrails. Air traffic data shows that, over Middle Europe at least, in the main flight levels most of these regions should be marked by detectable contrails. The mean areal coverage of these regions is estimated to be in the range of 10% to 20%, the cloud coverage by detected contrails was 0.9% in 60 AVHRR scenes covering Central Europe. (author) 3 refs.

  9. Developing NOAA's Climate Data Records From AVHRR and Other Data

    Science.gov (United States)

    Privette, J. L.; Bates, J. J.; Kearns, E. J.

    2010-12-01

    As part of the provisional NOAA Climate Service, NOAA is providing leadership in the development of authoritative, measurement-based information on climate change and variability. NOAA’s National Climatic Data Center (NCDC) recently initiated a satellite Climate Data Record Program (CDRP) to provide sustained and objective climate information derived from meteorological satellite data that NOAA has collected over the past 30+ years - particularly from its Polar Orbiting Environmental Satellites (POES) program. These are the longest sustained global measurement records in the world and represent billions of dollars of investment. NOAA is now applying advanced analysis methods -- which have improved remarkably over the last decade -- to the POES AVHRR and other instrument data. Data from other satellite programs, including NASA and international research programs and the Defense Meteorological Satellite Program (DMSP), are also being used. This process will unravel the underlying climate trend and variability information and return new value from the records. In parallel, NCDC will extend these records by applying the same methods to present-day and future satellite measurements, including the Joint Polar Satellite System (JPSS) and Jason-3. In this presentation, we will describe the AVHRR-related algorithm development activities that CDRP recently selected and funded through open competitions. We will particularly discuss some of the technical challenges related to adapting and using AVHRR algorithms with the VIIRS data that should become available with the launch of the NPOESS Preparatory Project (NPP) satellite in early 2012. We will also describe IT system development activities that will provide data processing and reprocessing, storage and management. We will also outline the maturing Program framework, including the strategies for coding and development standards, community reviews, independent program oversight, and research-to-operations algorithm

  10. Clasificador genérico de objetos en imágenes AVHRR

    OpenAIRE

    Pascual Ramírez, Fermín; Paz Pellat, Fernando; Martínez Menes, Mario; Palacios Vélez, Enrique; Mejía Sáenz, Enrique; Rubio Granados, Erasmo

    2010-01-01

    El presente artículo describe un algoritmo para llevar a cabo una clasificación genérica de objetos utilizando imágenes del sensor advanced very high resolution radiometer (AVHRR), basado en la firma espectral de los objetos genéricos (suelo, mezcla suelo-vegetación, cuerpos de agua, nubes, etc.). Debido a las particularidades de las bandas disponibles en el sensor AVHRR, se presenta un algoritmo específico utilizando la banda 3a (B3a) y otro utilizando la banda 3b (B3b) de este sensor. Los a...

  11. MODIS/Aqua Clouds 5-Min L2 Swath 1km and 5km V006

    Data.gov (United States)

    National Aeronautics and Space Administration — The MODIS/Aqua Clouds 5-Min L2 Swath 1km and 5km (MYD06_L2) product consists of cloud optical and physical parameters. These parameters are derived using remotely...

  12. Detection of coal mine fires in the Jharia coal field using NOAA/AVHRR data

    Energy Technology Data Exchange (ETDEWEB)

    Agarwal, R.; Singh, D.; Chauhan, D.S.; Singh, K.P. [Harcourt Butler Technological Institute, Kanpur (India)

    2006-09-15

    Coal fires represent a major problem in most coal producing countries. The Jharia coal field (JCF) has been affected by surface and sub-surface coal fires since the beginning of mining in the region in the mid 1800s. Currently research is focused on using freely available satellite data such as NOAA/AVHRR, MODIS (moderate resolution imaging spectrometer) etc for various applications. The potential of National Oceanographic and Atmospheric Administration (NOAA) Advanced Very High Resolution Radiometer (AVHRR) images for detecting coal fires and monitoring their progress and associated environmental hazards and risks to the local communities in the JCF has been reviewed. Three models, namely the thresholding model, the contextual model and the fuel mask model have been used to determine the potential fire pixels. Due to the coarse resolution of the NOAA/AVHRR data it was essential to determine sub-pixel fires as well. Results of this study have been verified using the MODIS active fires product, MOD14 (Terra). We have used ten images of NOAA/AVHRR for the year 2004 in this study, and the results are in broad agreement with the ground truth data.

  13. Evaluation of Operational Albedo Algorithms For AVHRR, MODIS and VIIRS: Case Studies in Southern Africa

    Science.gov (United States)

    Privette, J. L.; Schaaf, C. B.; Saleous, N.; Liang, S.

    2004-12-01

    Shortwave broadband albedo is the fundamental surface variable that partitions solar irradiance into energy available to the land biophysical system and energy reflected back into the atmosphere. Albedo varies with land cover, vegetation phenological stage, surface wetness, solar angle, and atmospheric condition, among other variables. For these reasons, a consistent and normalized albedo time series is needed to accurately model weather, climate and ecological trends. Although an empirically-derived coarse-scale albedo from the 20-year NOAA AVHRR record (Sellers et al., 1996) is available, an operational moderate resolution global product first became available from NASA's MODIS sensor. The validated MODIS product now provides the benchmark upon which to compare albedo generated through 1) reprocessing of the historic AVHRR record and 2) operational processing of data from the future National Polar-Orbiting Environmental Satellite System's (NPOESS) Visible/Infrared Imager Radiometer Suite (VIIRS). Unfortunately, different instrument characteristics (e.g., spectral bands, spatial resolution), processing approaches (e.g., latency requirements, ancillary data availability) and even product definitions (black sky albedo, white sky albedo, actual or blue sky albedo) complicate the development of the desired multi-mission (AVHRR to MODIS to VIIRS) albedo time series -- a so-called Climate Data Record. This presentation will describe the different albedo algorithms used with AVHRR, MODIS and VIIRS, and compare their results against field measurements collected over two semi-arid sites in southern Africa. We also describe the MODIS-derived VIIRS proxy data we developed to predict NPOESS albedo characteristics. We conclude with a strategy to develop a seamless Climate Data Record from 1982- to 2020.

  14. MEDOKADS - A 20 Year's Daily AVHRR Data Series for Analysis of Land Surface Properties

    Science.gov (United States)

    Koslowsky, D.; Billing, H.; Bolle, H.-J.

    2009-04-01

    To derive primary data products from raw AVHRR data, like spectral reflectances or temperatures, it is necessary to correct for sensor degradation and changing hardware specifications, to re-sample the data into a grid of equal pixel size, to perform geographical registration, cloud-screening and normalization for illumination and observation geometry. A data set which resulted from the application of these corrections is the top of the atmosphere Mediterranean Extended One-Km AVHRR Data Set (MEDOKADS) which now covers a period of 20 years. To study land surface processes, the obtained spectral data have to be combined, radiometric corrections for atmospheric effects, emissivity corrections in the case of temperature measurements have to be applied, and the variable over-flight times have to be accounted for. By application of complex evaluation schemes then higher level products are generated, like vegetation indices, surface albedo, and surface energy fluxes. The ultimate goal is to provide the users community with problem-related information. This includes the quantification of changes and the determination of trends. Methods and tools to reach this goal as well as their limitations are discussed. To validate the data, extended field measurements have been performed in which the scaling between local ground measurements and large scale satellite data play a major role. A major problem remains the application of atmospheric corrections because of the not well known variable aerosol content. The supervision of the quality of the derived information leads to the concept of anchor stations at which surface and atmospheric properties should permanently be measured.

  15. Monitoring start of season in Alaska with GLOBE, AVHRR, and MODIS data

    Science.gov (United States)

    Robin, Jessica; Dubayah, Ralph; Sparrow, Elena; Levine, Elissa

    2008-03-01

    This work evaluates whether continuity between Advanced Very High Resolution Radiometer (AVHRR) and Moderate Resolution Imaging Spectroradiometer (MODIS) normalized difference vegetation index (NDVI) is achievable for monitoring phenological changes in Alaska. This work also evaluates whether NDVI can detect changes in start of the growing season (SOS) in this region. Six quadratic regression models with NDVI as a function of accumulated growing degree days (AGDD) were developed from 2001 through 2004 AVHRR and MODIS NDVI data sets for urban, mixed, and forested land covers. Model parameters determined NDVI values for start of the observational period as well as peak and length of the growing season. NDVI values for start of the growing season were determined from the model equations and field observations of SOS made by GLOBE students and researchers at University of Alaska Fairbanks. AGDD was computed from daily air temperature. AVHRR and MODIS models were significantly different from one another with differences in the start of the observational season as well as start, peak, and length of the growing season. Furthermore, AGDD for SOS was significantly lower during the 1990s than the 1980s. NDVI values at SOS did not detect this change. There are limitations with using NDVI to monitor phenological changes in these regions because of snow, the large extent of conifers, and clouds, which restrict the composite period. In addition, differing processing and spectral characteristics restrict continuity between AVHRR and MODIS NDVI data sets.

  16. Association between Urinary Aflatoxin (AFM1) and Dietary Intake among Adults in Hulu Langat District, Selangor, Malaysia

    Science.gov (United States)

    Sulaiman, Siti Husna

    2018-01-01

    Aflatoxin is a food contaminant and its exposure through the diet is frequent and ubiquitous. A long-term dietary aflatoxin exposure has been linked to the development of liver cancer in populations with high prevalence of aflatoxin contamination in foods. Therefore, this study was conducted to identify the association between urinary aflatoxin M1 (AFM1), a biomarker of aflatoxin exposure, with the dietary intake among adults in Hulu Langat district, Selangor, Malaysia. Certain food products have higher potential for aflatoxin contamination and these were listed in a Food Frequency Questionnaire, which was given to all study participants. This allowed us to record consumption rates for each food product listed. Concomitantly, urine samples were collected, from adults in selected areas in Hulu Langat district, for the measurement of AFM1 levels using an ELISA kit. Of the 444 urine samples collected and tested, 199 were positive for AFM1, with 37 of them exceeding the limit of detection (LOD) of 0.64 ng/mL. Cereal products showed the highest consumption level among all food groups, with an average intake of 512.54 g per day. Chi-square analysis showed that consumption of eggs (X2 = 4.77, p = 0.03) and dairy products (X2 = 19.36, p food groups were having a phi and Cramer’s V value that less than 0.3, which indicated that the association between these food groups’ consumption and AFM1 level in urine was weak. PMID:29642443

  17. Allocating emissions to 4 km and 1 km horizontal spatial resolutions and its impact on simulated NOx and O3 in Houston, TX

    Science.gov (United States)

    Pan, Shuai; Choi, Yunsoo; Roy, Anirban; Jeon, Wonbae

    2017-09-01

    A WRF-SMOKE-CMAQ air quality modeling system was used to investigate the impact of horizontal spatial resolution on simulated nitrogen oxides (NOx) and ozone (O3) in the Greater Houston area (a non-attainment area for O3). We employed an approach recommended by the United States Environmental Protection Agency to allocate county-based emissions to model grid cells in 1 km and 4 km horizontal grid resolutions. The CMAQ Integrated Process Rate analyses showed a substantial difference in emissions contributions between 1 and 4 km grids but similar NOx and O3 concentrations over urban and industrial locations. For example, the peak NOx emissions at an industrial and urban site differed by a factor of 20 for the 1 km and 8 for the 4 km grid, but simulated NOx concentrations changed only by a factor of 1.2 in both cases. Hence, due to the interplay of the atmospheric processes, we cannot expect a similar level of reduction of the gas-phase air pollutants as the reduction of emissions. Both simulations reproduced the variability of NASA P-3B aircraft measurements of NOy and O3 in the lower atmosphere (from 90 m to 4.5 km). Both simulations provided similar reasonable predictions at surface, while 1 km case depicted more detailed features of emissions and concentrations in heavily polluted areas, such as highways, airports, and industrial regions, which are useful in understanding the major causes of O3 pollution in such regions, and to quantify transport of O3 to populated communities in urban areas. The Integrated Reaction Rate analyses indicated a distinctive difference of chemistry processes between the model surface layer and upper layers, implying that correcting the meteorological conditions at the surface may not help to enhance the O3 predictions. The model-observation O3 bias in our studies (e.g., large over-prediction during the nighttime or along Gulf of Mexico coastline), were due to uncertainties in meteorology, chemistry or other processes. Horizontal grid

  18. Determining the rate of forest conversion in Mato Grosso, Brazil, using Landsat MSS and AVHRR data

    Science.gov (United States)

    Nelson, Ross; Horning, Ned; Stone, Thomas A.

    1987-01-01

    AVHRR-LAC thermal data and Landsat MSS and TM spectral data were used to estimate the rate of forest clearing in Mato Grosso, Brazil, between 1981 and 1984. The Brazilian state was stratified into forest and nonforest. A list sampling procedure was used in the forest stratum to select Landsat MSS scenes for processing based on estimates of fire activity in the scenes. Fire activity in 1984 was estimated using AVHRR-LAC thermal data. State-wide estimates of forest conversion indicate that between 1981 and 1984, 353,966 ha + or - 77,000 ha (0.4 percent of the state area) were converted per year. No evidence of reforestation was found in this digital sample. The relationship between forest clearing rate (based on MSS-TM analysis) and fire activity (estimated using AVHRR data) was noisy (R-squared = 0.41). The results suggest that AVHRR data may be put to better use as a stratification tool than as a subsidiary variable in list sampling.

  19. Hurricane Satellite (HURSAT) from Advanced Very High Resolution Radiometer (AVHRR)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — Huricane Satellite (HURSAT)-Advanced Very High Resolution Radiometer (AVHRR) is used to extend the HURSAT data set such that appling the Objective Dvorak technique...

  20. Tumor suppressor protein SMAR1 modulates the roughness of cell surface: combined AFM and SEM study

    Directory of Open Access Journals (Sweden)

    Mamgain Hitesh

    2009-10-01

    Full Text Available Abstract Background Imaging tools such as scanning electron microscope (SEM and atomic force microscope (AFM can be used to produce high-resolution topographic images of biomedical specimens and hence are well suited for imaging alterations in cell morphology. We have studied the correlation of SMAR1 expression with cell surface smoothness in cell lines as well as in different grades of human breast cancer and mouse tumor sections. Methods We validated knockdown and overexpression of SMAR1 using RT-PCR as well as Western blotting in human embryonic kidney (HEK 293, human breast cancer (MCF-7 and mouse melanoma (B16F1 cell lines. The samples were then processed for cell surface roughness studies using atomic force microscopy (AFM and scanning electron microscopy (SEM. The same samples were used for microarray analysis as well. Tumors sections from control and SMAR1 treated mice as well as tissues sections from different grades of human breast cancer on poly L-lysine coated slides were used for AFM and SEM studies. Results Tumor sections from mice injected with melanoma cells showed pronounced surface roughness. In contrast, tumor sections obtained from nude mice that were first injected with melanoma cells followed by repeated injections of SMAR1-P44 peptide, exhibited relatively smoother surface profile. Interestingly, human breast cancer tissue sections that showed reduced SMAR1 expression exhibited increased surface roughness compared to the adjacent normal breast tissue. Our AFM data establishes that treatment of cells with SMAR1-P44 results into increase in cytoskeletal volume that is supported by comparative gene expression data showing an increase in the expression of specific cytoskeletal proteins compared to the control cells. Altogether, these findings indicate that tumor suppressor function of SMAR1 might be exhibited through smoothening of cell surface by regulating expression of cell surface proteins. Conclusion Tumor suppressor

  1. AFM imaging reveals the tetrameric structure of the TRPC1 channel

    International Nuclear Information System (INIS)

    Barrera, Nelson P.; Shaifta, Yasin; McFadzean, Ian; Ward, Jeremy P.T.; Henderson, Robert M.; Edwardson, J. Michael

    2007-01-01

    We have determined the subunit stoichiometry of the transient receptor potential C1 (TRPC1) channel by imaging isolated channels using atomic force microscopy (AFM). A frequency distribution of the molecular volumes of individual channel particles had two peaks, at 170 and 720 nm 3 , corresponding with the expected sizes of TRPC1 monomers and tetramers, respectively. Complexes were formed between TRPC1 channels and antibodies against a V5 epitope tag present on each subunit. The frequency distribution of angles between pairs of bound antibodies had two peaks, at 88 o and 178 o . This result again indicates that the channel assembles as a tetramer

  2. Snow and Ice Applications of AVHRR in Polar Regions: Report of a Workshop

    Science.gov (United States)

    Steffen, K.; Bindschadler, R.; Casassa, G.; Comiso, J.; Eppler, D.; Fetterer, F.; Hawkins, J.; Key, J.; Rothrock, D.; Thomas, R.; hide

    1993-01-01

    The third symposium on Remote Sensing of Snow and Ice, organized by the International Glaciological Society, took place in Boulder, Colorado, 17-22 May 1992. As part of this meeting a total of 21 papers was presented on snow and ice applications of Advanced Very High Resolution Radiometer (AVHRR) satellite data in polar regions. Also during this meeting a NASA sponsored Workshop was held to review the status of polar surface measurements from AVHRR. In the following we have summarized the ideas and recommendations from the workshop, and the conclusions of relevant papers given during the regular symposium sessions. The seven topics discussed include cloud masking, ice surface temperature, narrow-band albedo, ice concentration, lead statistics, sea-ice motion and ice-sheet studies with specifics on applications, algorithms and accuracy, following recommendations for future improvements. In general, we can affirm the strong potential of AVHRR for studying sea ice and snow covered surfaces, and we highly recommend this satellite data set for long-term monitoring of polar process studies. However, progress is needed to reduce the uncertainty of the retrieved parameters for all of the above mentioned topics to make this data set useful for direct climate applications such as heat balance studies and others. Further, the acquisition and processing of polar AVHRR data must become better coordinated between receiving stations, data centers and funding agencies to guarantee a long-term commitment to the collection and distribution of high quality data.

  3. OMI/Aura Aerosol product Multi-wavelength Algorithm Zoomed 1-Orbit L2 Swath 13x12km V003 (OMAEROZ) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — The reprocessed OMI/Aura Level-2 Zoomed Aerosol data product OMAEROZ at 13x12 km resolution have been made available from the NASA Goddard Earth Sciences Data and...

  4. Measuring bacterial cells size with AFM

    Directory of Open Access Journals (Sweden)

    Denise Osiro

    2012-03-01

    Full Text Available Atomic Force Microscopy (AFM can be used to obtain high-resolution topographical images of bacteria revealing surface details and cell integrity. During scanning however, the interactions between the AFM probe and the membrane results in distortion of the images. Such distortions or artifacts are the result of geometrical effects related to bacterial cell height, specimen curvature and the AFM probe geometry. The most common artifact in imaging is surface broadening, what can lead to errors in bacterial sizing. Several methods of correction have been proposed to compensate for these artifacts and in this study we describe a simple geometric model for the interaction between the tip (a pyramidal shaped AFM probe and the bacterium (Escherichia coli JM-109 strain to minimize the enlarging effect. Approaches to bacteria immobilization and examples of AFM images analysis are also described.

  5. AFM indentation study of breast cancer cells

    International Nuclear Information System (INIS)

    Li, Q.S.; Lee, G.Y.H.; Ong, C.N.; Lim, C.T.

    2008-01-01

    Mechanical properties of individual living cells are known to be closely related to the health and function of the human body. Here, atomic force microscopy (AFM) indentation using a micro-sized spherical probe was carried out to characterize the elasticity of benign (MCF-10A) and cancerous (MCF-7) human breast epithelial cells. AFM imaging and confocal fluorescence imaging were also used to investigate their corresponding sub-membrane cytoskeletal structures. Malignant (MCF-7) breast cells were found to have an apparent Young's modulus significantly lower (1.4-1.8 times) than that of their non-malignant (MCF-10A) counterparts at physiological temperature (37 deg. C), and their apparent Young's modulus increase with loading rate. Both confocal and AFM images showed a significant difference in the organization of their sub-membrane actin structures which directly contribute to their difference in cell elasticity. This change may have facilitated easy migration and invasion of malignant cells during metastasis

  6. Estimación de la temperatura superficial del mar desde datos satelitales NOAA-AVHRR: validación de algoritmos aplicados a la costa norte de Chile Sea surface temperature estimation from NOAA-AVHRR satellite data: validation of algorithms applied to the northern coast of Chile

    Directory of Open Access Journals (Sweden)

    Juan C Parra

    2011-01-01

    Full Text Available Se aplicaron y compararon tres algoritmos del tipo Split-Window (SW, que permitieron estimar la temperatura superficial del mar desde datos aportados por el sensor Advanced Very High Resolution Radiometer (AVHRR, a bordo de la serie de satélites de la National Oceanic and Atmospheric Administration (NOAA. La validación de los algoritmos fue lograda por comparación con mediciones in situ de temperatura del mar provenientes de una boya hidrográfica, ubicada frente a la costa norte de Chile (21°21'S, 70°6'W; Región de Tarapacá, a 3 km de la costa aproximadamente. Los mejores resultados se obtuvieron por aplicación del algoritmo propuesto por Sobrino & Raissouni (2000. En efecto, diferencias entre la temperatura medida in situ y la estimada por SW, permitieron evidenciar una media y desviación estándar de 0,3° y 0,8°K, respectivamente.The present article applies and compares three split-window (SW algorithms, which allowed the estimation of sea surface temperature using data obtained from the Advanced Very High Resolution Radiometer (AVHRR on board the National Oceanic and Atmospheric Administration (NOAA series of satellites. The algorithms were validated by comparison with in situ measurements of sea temperature obtained from a hydrographical buoy located off the coast of northern Chile (21°21'S, 70°6'W; Tarapacá Región, approximately 3 km from the coast. The best results were obtained by the application of the algorithm proposed by Sobrino & Raissouni (2000. The mean and standard deviation of the differences between the temperatures measured in situ and those estimated by SW were 0.3° and 0.8°K, respectively.

  7. NOAA Climate Data Record (CDR) of AVHRR Surface Reflectance, Version 4

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This dataset contains gridded daily surface reflectance and brightness temperatures derived from the Advanced Very High Resolution Radiometer (AVHRR) sensors onboard...

  8. Evaluation of the Impacts of Assimilating the TAMDAR Data on 12/4 km Grid WRF-Based RTFDDA Simulations over the CONUS

    Directory of Open Access Journals (Sweden)

    Yongxin Zhang

    2016-01-01

    Full Text Available An analysis of the impacts of assimilating the Tropospheric Airborne Meteorological Data Report (TAMDAR data with the Weather Research and Forecasting- (WRF- real-time four-dimensional data assimilation (RTFDDA and forecasting system over the Contiguous US (CONUS is presented. The impacts of the horizontal resolution increase from 12km to 4 km on the WRF-RTFDDA simulations are also examined in conjunction with the TAMDAR data impacts. The assimilation of the TAMDAR data reduces the root mean squared error of the moisture field predictions and increases the correlation between the predictions and the observations for both domains with 12km and 4 km grid spacings. The TAMDAR data reduce the model dry biases in the middle and lower levels by adding moisture at those levels. Assimilating the TAMDAR data improves temperature predictions at middle to high levels and wind speed predictions at all levels especially for the 12km domain. Increasing the horizontal resolution from 12km to 4 km results in significantly larger impacts on surface variables than assimilating the TAMDAR data.

  9. OMI/Aura Cloud Pressure and Fraction (O2-O2 Absorption) Zoomed 1-Orbit L2 Swath 13x12km V003

    Data.gov (United States)

    National Aeronautics and Space Administration — The reprocessed OMI/Aura Level-2 zoomed cloud data product OMCLDO2Z at 13x12 km resolution is now available ( http://disc.gsfc.nasa.gov/Aura/OMI/omcldo2z_v003.shtml...

  10. NOAA Climate Data Record (CDR) of Reflectance and Brightness Temperatures from AVHRR Pathfinder Atmospheres - Extended (PATMOS-x), Version 5.3

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This NOAA Climate Data Record (CDR) of AVHRR reflectance and brightness temperatures was produced by the University of Wisconsin using the AVHRR Pathfinder...

  11. The AFm phase in Portland cement

    International Nuclear Information System (INIS)

    Matschei, T.; Lothenbach, B.; Glasser, F.P.

    2007-01-01

    The AFm phase of Portland cements refers to a family of hydrated calcium aluminates based on the hydrocalumite-like structure of 4CaO.Al 2 O 3 .13-19 H 2 O. However OH - may be replaced by SO 4 2- and CO 3 2- . Except for limited replacement (50 mol%, maximum) of sulfate by hydroxide, these compositions do not form solid solutions and, from the mineralogical standpoint, behave as separate phases. Therefore many hydrated cements will contain mixtures of AFm phases. AFm phases have been made from precursors and experimentally-determined phase relationships are depicted at 25 deg. C. Solubility data are reported and thermodynamic data are derived. The 25 deg. C stability of AFm phases is much affected by the nature of the anion: carbonate stabilises AFm and displaces OH and SO 4 at species activities commonly encountered in cement systems. However in the presence of portlandite, and as carbonate displaces sulfate in AFm, the reaction results in changes in the amount of both portlandite and ettringite: specimen calculations are presented to quantify these changes. The scheme of phase balances enables calculation of the mineralogical balances of a hydrated cement paste with greater accuracy than hitherto practicable

  12. AVHRR CoastWatch Regional Data, November 2003 - present (NODC Accession 0099041)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The mapped data derived from AVHRR (Advanced High Resolution Radiometer) onboard NOAA and Metop satellites is divided into files for CoastWatch regions of interest....

  13. Application of focused ion beam for the fabrication of AFM probes

    Science.gov (United States)

    Kolomiytsev, A. S.; Lisitsyn, S. A.; Smirnov, V. A.; Fedotov, A. A.; Varzarev, Yu N.

    2017-10-01

    The results of an experimental study of the probe tips fabrication for critical-dimension atomic force microscopy (CD-AFM) using the focused ion beam (FIB) induced deposition are presented. Methods of the FIB-induced deposition of tungsten and carbon onto the tip of an AFM probe are studied. Based on the results obtained in the study, probes for the CD-AFM technique with a tip height about 1 μm and radius of 20 nm were created. The formation of CD-AFM probes by FIB-induced deposition allows creating a high efficiency tool for nanotechnology and nanodiagnostics. The use of modified cantilevers allows minimizing the artefacts of AFM images and increasing the accuracy of the relief measurement. The obtained results can be used for fabrication of AFM probes for express monitoring of the technological process in the manufacturing of the elements for micro- and nanoelectronics.

  14. Automated cloud screening of AVHRR imagery using split-and-merge clustering

    Science.gov (United States)

    Gallaudet, Timothy C.; Simpson, James J.

    1991-01-01

    Previous methods to segment clouds from ocean in AVHRR imagery have shown varying degrees of success, with nighttime approaches being the most limited. An improved method of automatic image segmentation, the principal component transformation split-and-merge clustering (PCTSMC) algorithm, is presented and applied to cloud screening of both nighttime and daytime AVHRR data. The method combines spectral differencing, the principal component transformation, and split-and-merge clustering to sample objectively the natural classes in the data. This segmentation method is then augmented by supervised classification techniques to screen clouds from the imagery. Comparisons with other nighttime methods demonstrate its improved capability in this application. The sensitivity of the method to clustering parameters is presented; the results show that the method is insensitive to the split-and-merge thresholds.

  15. Characterisation of tissue factor-bearing extracellular vesicles with AFM: comparison of air-tapping-mode AFM and liquid Peak Force AFM

    Directory of Open Access Journals (Sweden)

    Julie Hardij

    2013-08-01

    Full Text Available Introduction: Extracellular vesicles (EVs are shed from cells and carry markers of the parent cells. Vesicles derived from cancer cells reach the bloodstream and locally influence important physiological processes. It has been previously shown that procoagulant vesicles are circulating in patients’ fluids. These EVs are therefore considered as promising biomarkers for the thrombotic risk. Because of their small size, classical methods such as flow cytometry suffer from limitation for their characterisation. Atomic force microscopy (AFM has been proposed as a promising complementary method for the characterisation of EVs. Objectives: The objectives of this study are: (a to develop and validate AFM with specific antibodies (anti-TF and (b to compare air and liquid modes for EVs’ size and number determination as potential biomarkers of the prothrombotic risk. Methods: AFM multimode nanoscope III was used for air tapping mode (TM. AFM catalyst was used for liquid Peak Force Tapping (PFT mode. Vesicles are generated according to Davila et al.'s protocol. Substrates are coated with various concentrations of antibodies, thanks to ethanolamine and glutaraldehyde. Results: Vesicles were immobilised on antibody-coated surfaces to select tissue factor (TF-positive vesicles. The size range of vesicles observed in liquid PFT mode is 6–10 times higher than in air mode. This corresponds to the data found in the literature. Conclusion: We recommend liquid PFT mode to analyse vesicles on 5 µg/ml antibody-coated substrates.

  16. Foot Temperatures and Toe Blood Flow during a 12 km Winter Hike and Guard Duty

    National Research Council Canada - National Science Library

    Mekjavic, Igor B; Kocjan, Nina; Vrhovec, Miro; Golja, Petra; House, Carol; Eiken, Ola

    2005-01-01

    .... During the 3-week study, the trails were covered with snow. Peripheral vasodilatation, presumably as a result of the elevated core temperature, maintained average skin temperature constant during the 12 km hike, and increased toe temperature...

  17. Global 1-km Sea Surface Temperature (G1SST)

    Data.gov (United States)

    National Aeronautics and Space Administration — JPL OurOcean Portal: A daily, global Sea Surface Temperature (SST) data set is produced at 1-km (also known as ultra-high resolution) by the JPL ROMS (Regional Ocean...

  18. Development and analysis of a 12-year daily 1-km forest fire dataset across North America from NOAA/AVHRR

    Science.gov (United States)

    Ruiliang Pu; Zhanqing Li; Peng Gong; Ivan Csiszar; Robert Fraser; Wei-Min Hao; Shobha Kondragunta; Fuzhong Weng

    2007-01-01

    Fires in boreal and temperate forests play a significant role in the global carbon cycle. While forest fires in North America (NA) have been surveyed extensively by U.S. and Canadian forest services, most fire records are limited to seasonal statistics without information on temporal evolution and spatial expansion. Such dynamic information is crucial for modeling fire...

  19. AFM annual report 1983 (Petroleum Industry). [Export Federation for Mineral Oil, Federal Republic of Germany]. AFM Jahresbericht 1983

    Energy Technology Data Exchange (ETDEWEB)

    1983-01-01

    The annual report 1983 of the Export Federation for Mineral Oil (AFM) contains informations about the mineral oil economics, the market development for selected main products and the environmental protection. The AFM terms (standard conditions for barge transactions) for the mineral oil industry are given. The AFM Oil Market Report Daily has extended the frame of its reports in 1983.

  20. The Van Sant AVHRR image projected onto a rhombicosidodecahedron

    Science.gov (United States)

    Baron, Michael; Morain, Stan

    1996-03-01

    IDEATION, a design and development corporation, Santa Fe, New Mexico, has modeled Tom Van Sant's ``The Earth From Space'' image to a rhombicosidodecahedron. ``The Earth from Space'' image, produced by the Geosphere® Project in Santa Monica, California, was developed from hundreds of AVHRR pictures and published as a Mercator projection. IDEATION, utilizing a digitized Robinson Projection, fitted the image to foldable, paper components which, when interconnected by means of a unique tabular system, results in a rhombicosidodecahedron representation of the Earth exposing 30 square, 20 triangular, and 12 pentagonal faces. Because the resulting model is not spherical, the borders of the represented features were rectified to match the intersecting planes of the model's faces. The resulting product will be licensed and commercially produced for use by elementary and secondary students. Market research indicates the model will be used in both the demonstration of geometric principles and the teaching of fundamental spatial relations of the Earth's lands and oceans.

  1. Nano Mechanical Machining Using AFM Probe

    Science.gov (United States)

    Mostofa, Md. Golam

    Complex miniaturized components with high form accuracy will play key roles in the future development of many products, as they provide portability, disposability, lower material consumption in production, low power consumption during operation, lower sample requirements for testing, and higher heat transfer due to their very high surface-to-volume ratio. Given the high market demand for such micro and nano featured components, different manufacturing methods have been developed for their fabrication. Some of the common technologies in micro/nano fabrication are photolithography, electron beam lithography, X-ray lithography and other semiconductor processing techniques. Although these methods are capable of fabricating micro/nano structures with a resolution of less than a few nanometers, some of the shortcomings associated with these methods, such as high production costs for customized products, limited material choices, necessitate the development of other fabricating techniques. Micro/nano mechanical machining, such an atomic force microscope (AFM) probe based nano fabrication, has, therefore, been used to overcome some the major restrictions of the traditional processes. This technique removes material from the workpiece by engaging micro/nano size cutting tool (i.e. AFM probe) and is applicable on a wider range of materials compared to the photolithographic process. In spite of the unique benefits of nano mechanical machining, there are also some challenges with this technique, since the scale is reduced, such as size effects, burr formations, chip adhesions, fragility of tools and tool wear. Moreover, AFM based machining does not have any rotational movement, which makes fabrication of 3D features more difficult. Thus, vibration-assisted machining is introduced into AFM probe based nano mechanical machining to overcome the limitations associated with the conventional AFM probe based scratching method. Vibration-assisted machining reduced the cutting forces

  2. Temperature lidar measurements from 1 to 105 km altitude using resonance, Rayleigh, and Rotational Raman scattering

    Directory of Open Access Journals (Sweden)

    M. Alpers

    2004-01-01

    Full Text Available For the first time, three different temperature lidar methods are combined to obtain time-resolved complete temperature profiles with high altitude resolution over an altitude range from the planetary boundary layer up to the lower thermosphere (about 1–105 km. The Leibniz-Institute of Atmospheric Physics (IAP at Kühlungsborn, Germany (54° N, 12° E operates two lidar instruments, using three different temperature measurement methods, optimized for three altitude ranges: (1 Probing the spectral Doppler broadening of the potassium D1 resonance lines with a tunable narrow-band laser allows atmospheric temperature profiles to be determined at metal layer altitudes (80–105 km. (2 Between about 20 and 90 km, temperatures were calculated from Rayleigh backscattering by air molecules, where the upper start values for the calculation algorithm were taken from the potassium lidar results. Correction methods have been applied to account for, e.g. Rayleigh extinction or Mie scattering of aerosols below about 32 km. (3 At altitudes below about 25 km, backscattering in the Rotational Raman lines is strong enough to obtain temperatures by measuring the temperature dependent spectral shape of the Rotational Raman spectrum. This method works well down to about 1 km. The instrumental configurations of the IAP lidars were optimized for a 3–6 km overlap of the temperature profiles at the method transition altitudes. We present two night-long measurements with clear wave structures propagating from the lower stratosphere up to the lower thermosphere.

  3. Scaling behavior of spin gap of the bond alternating anisotropic spin-1/2 Heisenberg chain

    Energy Technology Data Exchange (ETDEWEB)

    Paul, Susobhan, E-mail: suso.phy.paul@gmail.com [Department of Physics, Scottish Church College, 1 & 3 Urquhart Square, Kolkata-700006 (India); Ghosh, Asim Kumar, E-mail: asimkumar96@yahoo.com [Department of Physics, Jadavpur University, 188 Raja S C Mallik Road, Kolkata-700032 (India)

    2016-05-06

    Scaling behavior of spin gap of a bond alternating spin-1/2 anisotropic Heisenberg chain has been studied both in ferromagnetic (FM) and antiferromagnetic (AFM) cases. Spin gap has been estimated by using exact diagonalization technique. All those quantities have been obtained for a region of anisotropic parameter Δ defined by 0≤Δ≤1. Spin gap is found to develop as soon as the non-uniformity in the alternating bond strength is introduced in the AFM regime which furthermore sustains in the FM regime as well. Scaling behavior of the spin gap has been studied by introducing scaling exponent. The variation of scaling exponents with Δ is fitted with a regular function.

  4. SU-8 hollow cantilevers for AFM cell adhesion studies

    Science.gov (United States)

    Martinez, Vincent; Behr, Pascal; Drechsler, Ute; Polesel-Maris, Jérôme; Potthoff, Eva; Vörös, Janos; Zambelli, Tomaso

    2016-05-01

    A novel fabrication method was established to produce flexible, transparent, and robust tipless hollow atomic force microscopy (AFM) cantilevers made entirely from SU-8. Channels of 3 μm thickness and several millimeters length were integrated into 12 μm thick and 40 μm wide cantilevers. Connected to a pressure controller, the devices showed high sealing performance with no leakage up to 6 bars. Changing the cantilever lengths from 100 μm to 500 μm among the same wafer allowed the targeting of various spring constants ranging from 0.5 to 80 N m-1 within a single fabrication run. These hollow polymeric AFM cantilevers were operated in the optical beam deflection configuration. To demonstrate the performance of the device, single-cell force spectroscopy experiments were performed with a single probe detaching in a serial protocol more than 100 Saccharomyces cerevisiae yeast cells from plain glass and glass coated with polydopamine while measuring adhesion forces in the sub-nanoNewton range. SU-8 now offers a new alternative to conventional silicon-based hollow cantilevers with more flexibility in terms of complex geometric design and surface chemistry modification.

  5. SU-8 hollow cantilevers for AFM cell adhesion studies

    International Nuclear Information System (INIS)

    Martinez, Vincent; Behr, Pascal; Vörös, Janos; Zambelli, Tomaso; Drechsler, Ute; Polesel-Maris, Jérôme; Potthoff, Eva

    2016-01-01

    A novel fabrication method was established to produce flexible, transparent, and robust tipless hollow atomic force microscopy (AFM) cantilevers made entirely from SU-8. Channels of 3 μm thickness and several millimeters length were integrated into 12 μm thick and 40 μm wide cantilevers. Connected to a pressure controller, the devices showed high sealing performance with no leakage up to 6 bars. Changing the cantilever lengths from 100 μm to 500 μm among the same wafer allowed the targeting of various spring constants ranging from 0.5 to 80 N m −1 within a single fabrication run. These hollow polymeric AFM cantilevers were operated in the optical beam deflection configuration. To demonstrate the performance of the device, single-cell force spectroscopy experiments were performed with a single probe detaching in a serial protocol more than 100 Saccharomyces cerevisiae yeast cells from plain glass and glass coated with polydopamine while measuring adhesion forces in the sub-nanoNewton range. SU-8 now offers a new alternative to conventional silicon-based hollow cantilevers with more flexibility in terms of complex geometric design and surface chemistry modification. (paper)

  6. Reconstruction Algorithms in Undersampled AFM Imaging

    DEFF Research Database (Denmark)

    Arildsen, Thomas; Oxvig, Christian Schou; Pedersen, Patrick Steffen

    2016-01-01

    This paper provides a study of spatial undersampling in atomic force microscopy (AFM) imaging followed by different image reconstruction techniques based on sparse approximation as well as interpolation. The main reasons for using undersampling is that it reduces the path length and thereby...... the scanning time as well as the amount of interaction between the AFM probe and the specimen. It can easily be applied on conventional AFM hardware. Due to undersampling, it is then necessary to further process the acquired image in order to reconstruct an approximation of the image. Based on real AFM cell...... images, our simulations reveal that using a simple raster scanning pattern in combination with conventional image interpolation performs very well. Moreover, this combination enables a reduction by a factor 10 of the scanning time while retaining an average reconstruction quality around 36 dB PSNR...

  7. Surface analysis with STM and AFM

    CERN Document Server

    Magonov, Sergi N

    1996-01-01

    Scanning tunneling microscopy (STM) and atomic force microscopy (AFM) are powerful tools for surface examination. In the past, many STM and AFM studies led to erroneous conclusions due to lack of proper theoretical considerations and of an understanding of how image patterns are affected by measurement conditions. For this book, two world experts, one on theoretical analysis and the other on experimental characterization, have joined forces to bring together essential components of STM and AFM studies: The practical aspects of STM, the image simulation by surface electron density plot calculat

  8. The use of NOAA AVHRR satellite data for mapping sediment ...

    African Journals Online (AJOL)

    The use of NOAA AVHRR satellite data for mapping sediment variability in the marine and coastal environment. ... The area near Big Constance Lake, which has a persistently higher concentration of suspended sediment around the year, is a suspected non-depositional area. The southwest winds cause a circulation in the ...

  9. A brief comparison of radiometers at NSIDC and their potential to generate long ESDRs

    Science.gov (United States)

    Moth, P.; Johnston, T.; Haran, T. M.; Fowler, D. K.

    2017-12-01

    Radiometers have played a big part in Earth observing science. In this poster we compare three such instruments: the Advanced Very-High-resolution Radiometer (AVHRR), the Moderate Resolution Imaging Spectroradiometer (MODIS), and the Visible Infrared Imaging Radiometer Suite (VIIRS). The NASA National Snow and Ice Distributed Active Archive Center (NSIDC DAAC) has archived cryospheric data from all three of these instruments. AVHRR was a 4-channel radiometer that was first launched in 1978 aboard the TIROS-N satellite. Subsequent missions launched improved versions of AVHRR with five and six channels, observing Earth in frequencies ranging from 0.58 μm to 12.5 μm with a resolution at nadir of 1.09 km. MODIS instruments fly onboard NASA's Earth Observing System (EOS) Terra and Aqua satellites. Launched in 1999 and 2002, respectively, they still produce much sought after data observed in 36 spectral bands ranging from 0.4 μm to 14.4 μm. Two bands image Earth at a nominal resolution of 250 m at nadir, five at 500 m, and the remaining 29 bands at 1 km. A ±55-degree scanning pattern at the sun-synchronous orbit of 705 km achieves a 2,330 km swath and provides global coverage every one to two days VIIRS, NOAA's latest radiometer, was launched aboard the Suomi National Polar-orbiting Partnership satellite on October 28, 2011. Working collaboratively, NASA and NOAA are producing data that is archived and distributed via NASA DAACs. The VIIRS radiometer comprises 22 bands; five for high-resolution imagery, 16 at moderate resolution, and one panchromatic day/night band. VIIRS is a whiskbroom scanning radiometer that covers the spectrum between 0.412 μm and 12.01 μm and acquires spatial resolutions at nadir of 750 m, 375 m, and 750 m, respectively. Although these instruments are configured with different spectral bands, each was designed with an eye to the future. MODIS can be thought of as a successor to the AVHRR mission, adding capabilities that yielded better data

  10. Regional thermal patterns in Portugal using satellite images (NOAA AVHRR

    Directory of Open Access Journals (Sweden)

    António Lopes

    1995-06-01

    Full Text Available In this paper two NOAA AVHRR diurnal images (channel 4 are used to determine the required procedures aiming at a future operational analysis system in Portugal. Preprocessing and classification operations are described. Strong correlation between air and surface temperature is verified and rather detailed air temperature patterns can be inferred.

  11. MODIS/Terra Calibrated Radiances 5-Min L1B Swath 1km V006

    Data.gov (United States)

    National Aeronautics and Space Administration — The MODIS/Terra Calibrated Radiances 5-Min L1B Swath 1km (MOD021KM) contains calibrated and geolocated at-aperture radiances for 36 discrete bands located in the 0.4...

  12. The new Nissan high efficient 1.2L 3cyl GDI supercharged engine enables 95g/km CO2 emissions and high driving performance

    Energy Technology Data Exchange (ETDEWEB)

    Kishi, Kazuaki; Satou, Takeshi [Nissan Motor Co., Ltd., Kanagawa (Japan)

    2012-11-01

    This paper describes a new 1.2-liter three cylinder gasoline engine named HR12DDR, with the target to achieve the lowest level CO2 in the European B-segment market and also, to satisfy the customer's driving pleasure through high output performance. This engine is developed with the consideration of meeting further strict regulations in the years ahead and of the possibility of being an alternative powertrain of diesel in the future as well. As a first step this engine was applied on the European Nissan Micra in 2011; achieving 95g/km CO2 emissions(NEDC mode). This low fuel consumption was realized mainly through technologies which scope to maximize thermal efficiency with high compression ratio, and to minimize the mechanical friction loss. The combustion was optimized by Direct Injection (DI) system. To obtain a better fuel economy performance without sacrificing high output, we chose the supercharger system with bypass valve and magnetic clutch. Details of the HR12DDR are presented here along with highlights of the applied technologies. (orig.)

  13. AFM measurements on ferrous materials

    Directory of Open Access Journals (Sweden)

    Ros Yáñez, T.

    2000-08-01

    Full Text Available The Atomic Force Microscope (AFM has been successfully used for the characterisation of the surface topography of a very wide range of materials. The AFM is an interesting technique to study the surface of materials and specifically to study surface effects in steel, e.g. after polishing and/or after etching. This technique allows not only to study the topography of the samples, but it is also a useful tool to obtain structural details of surfaces and for the identification of different phases. In this paper, some applications are shown concerning the study of the microstructure of multiphase-steels.

    El Microcopio de Fuerza Atómica (AFM es utilizado en la caracterización topográfica de una gran variedad de materiales. El AFM es una interesante técnica para el estudio de la superficie de los aceros, ya sea con ataque químico o no. Esta técnica es también una útil herramienta para obtener detalles estructurales en las superficies y en la identificación de fases. En este trabajo algunas de estas aplicaciones son mostradas en el estudio de la microestructura de aceros multifásicos.

  14. BOREAS AFM-11 Aircraft Flux Analysis Reports

    Data.gov (United States)

    National Aeronautics and Space Administration — Reports from the BOREAS AFM-11 team regarding quality control and sampling analysis of data collected by other AFM personnel using the Electra, LongEZ, and Twin...

  15. NOAA Climate Data Record (CDR) of AVHRR Polar Pathfinder Extended (APP-X) Cryosphere

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Climate Data Record (CDR) of the extended AVHRR Polar Pathfinder (APP-x) cryosphere contains 19 geophysical variables over the Arctic and Antarctic for the...

  16. Coral Reef Watch, Degree Heating Weeks, 50 km

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — NOAA Coral Reef Watch distributes Degree Heating Week products using a combination of the POES AVHRR Global Area Coverage data, and data from a climatological...

  17. GHRSST Level 3P North Atlantic Regional Subskin Sea Surface Temperature from the Advanced Very High Resolution Radiometer (AVHRR) on NOAA-19 (GDS version 1)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A Group for HIgh Resolution Sea Surface Temperature (GHRSST) dataset for the North Atlantic Region (NAR) from the Advanced Very High Resolution Radiometer (AVHRR) on...

  18. Beyond topography - enhanced imaging of cometary dust with the MIDAS AFM

    Science.gov (United States)

    Bentley, M. S.; Torkar, K.; Jeszenszky, H.; Romstedt, J.

    2013-09-01

    The MIDAS atomic force microscope (AFM) onboard the Rosetta spacecraft is primarily designed to return the 3D shape and structure of cometary dust particles collected at comet 67P/Churyumov-Gerasimenko [1]. Commercial AFMs have, however, been further developed to measure many other sample properties. The possibilities to make such measurements with MIDAS are explored here.

  19. A New Approach for More Effective Fire Detection Method Using NOAA AVHRR Images

    National Research Council Canada - National Science Library

    Kalpoma, Kazi A; Haramoto, Yoshiaki; Kudoh, Jun-ich

    2005-01-01

    .... The Advanced Very High Resolution Radiometer (AVHRR) flown on the NOAA satellite series is one of the best systems for fire monitoring due to the combination of a very good temporal resolution of several images a day...

  20. Global two-channel AVHRR aerosol climatology: effects of stratospheric aerosols and preliminary comparisons with MODIS and MISR retrievals

    International Nuclear Information System (INIS)

    Geogdzhayev, Igor V.; Mishchenko, Michael I.; Liu Li; Remer, Lorraine

    2004-01-01

    We present an update on the status of the global climatology of the aerosol column optical thickness and Angstrom exponent derived from channel-1 and -2 radiances of the Advanced Very High Resolution Radiometer (AVHRR) in the framework of the Global Aerosol Climatology Project (GACP). The latest version of the climatology covers the period from July 1983 to September 2001 and is based on an adjusted value of the diffuse component of the ocean reflectance as derived from extensive comparisons with ship sun-photometer data. We use the updated GACP climatology and Stratospheric Aerosol and Gas Experiment (SAGE) data to analyze how stratospheric aerosols from major volcanic eruptions can affect the GACP aerosol product. One possible retrieval strategy based on the AVHRR channel-1 and -2 data alone is to infer both the stratospheric and the tropospheric aerosol optical thickness while assuming fixed microphysical models for both aerosol components. The second approach is to use the SAGE stratospheric aerosol data in order to constrain the AVHRR retrieval algorithm. We demonstrate that the second approach yields a consistent long-term record of the tropospheric aerosol optical thickness and Angstrom exponent. Preliminary comparisons of the GACP aerosol product with MODerate resolution Imaging Spectrometer (MODIS) and Multiangle Imaging Spectro-Radiometer aerosol retrievals show reasonable agreement, the GACP global monthly optical thickness being lower than the MODIS one by approximately 0.03. Larger differences are observed on a regional scale. Comparisons of the GACP and MODIS Angstrom exponent records are less conclusive and require further analysis

  1. AFM-CMM integrated instrument user manual

    DEFF Research Database (Denmark)

    Marinello, Francesco; Bariani, Paolo

    This manual gives general important guidelines for a proper use of the integrated AFM-CMM instrument. More information can be collected reading: • N. Kofod Ph.D thesis [1]; • P. Bariani Ph.D thesis [2]; • Dualscope DME 95-200 operation manuals [3]; • SPIP help [4] • Stitching software user manual...

  2. Advective surface velocity in the north west Pacific derived from NOAA AVHRR images

    Digital Repository Service at National Institute of Oceanography (India)

    Pankajakshan, T.; Akiyama, M.; Okada, Y.; Sugimori, Y.

    Using sequential AVHRR images in November 1983, nearsurface advective velocities are derived in the region Kuroshio south of Japan. For deriving the velocities two methods are used. One is the Method of Cross Correlation (MCC), using image pair...

  3. Neutron detection using CR-39 and Atomic Force Microscopy (AFM)

    International Nuclear Information System (INIS)

    Vazquez L, C.; Fragoso, R.; Felix, R.; Golzarri, J.I.; Espinosa, G.; Castillo, F.

    2007-01-01

    AFM has been applied in many CR-39 track formation analyses. In this paper, the use of AFM in the neutron detection and analysis of the track formation is reported. The irradiation was made with an 1.5 GBq (0.5 Ci) 241 Am-Be neutron source, with and without a polyethylene radiator. The surface analysis was made to the CR-39 fresh material without irradiation, after the irradiation, and after a very short etching time. The results show important differences between the irradiation, with and without polyethylene radiator, and the latent tracks of the neutron in the CR-39 polycarbonate. The development of track formation after very short etching time and pits characterization were measured too using the AFM facilities. (Author)

  4. High acetone concentrations throughout the 0-12 km altitude range over the tropical rainforest in Surinam

    NARCIS (Netherlands)

    Poschl, U; Williams, J; Hoor, P; Fischer, H; Crutzen, PJ; Warneke, C; Holzinger, R; Hansel, A; Jordan, A; Lindinger, W; Scheeren, HA; Peters, W; Lelieveld, J

    Airborne measurements of acetone were performed over the tropical rainforest in Surinam (2 degrees -7 degrees N, 54 degrees -58 degrees W, 0-12 km altitude) during the LBA-CLAIRE campaign in March 1998, using a novel proton transfer reaction mass spectrometer (PTR-MS) that enables the on-line

  5. MODIS/Terra Calibrated Radiances 5-Min L1B Swath 1km Subsetted V005

    Data.gov (United States)

    National Aeronautics and Space Administration — This data type (MOD02SSH) is a subsample from the MODIS Level 1B 1-km data. Every fifth pixel is taken from the MOD021KM product and written out to MOD02SSH. The...

  6. AFM image of an entire polygene chromosome

    International Nuclear Information System (INIS)

    Li Minqian; Takeuchi; Ikai, A.

    1994-01-01

    The author present AFM images of an entire polygene chromosome of Drosophila for the first time. Comparing with conventional optical microscope, the AFM image of the polygene chromosomes provides much higher resolution and 3-D measurement capability which will lead to finer scale gene mapping and identification

  7. MetaRep, an extended CMAS 3D program to visualize mafic (CMAS, ACF-S, ACF-N) and pelitic (AFM-K, AFM-S, AKF-S) projections

    Science.gov (United States)

    France, Lydéric; Nicollet, Christian

    2010-06-01

    MetaRep is a program based on our earlier program CMAS 3D. It is developed in MATLAB ® script. MetaRep objectives are to visualize and project major element compositions of mafic and pelitic rocks and their minerals in the pseudo-quaternary projections of the ACF-S, ACF-N, CMAS, AFM-K, AFM-S and AKF-S systems. These six systems are commonly used to describe metamorphic mineral assemblages and magmatic evolutions. Each system, made of four apices, can be represented in a tetrahedron that can be visualized in three dimensions with MetaRep; the four tetrahedron apices represent oxides or combination of oxides that define the composition of the projected rock or mineral. The three-dimensional representation allows one to obtain a better understanding of the topology of the relationships between the rocks and minerals and relations. From these systems, MetaRep can also project data in ternary plots (for example, the ACF, AFM and AKF ternary projections can be generated). A functional interface makes it easy to use and does not require any knowledge of MATLAB ® programming. To facilitate the use, MetaRep loads, from the main interface, data compiled in a Microsoft Excel ™ spreadsheet. Although useful for scientific research, the program is also a powerful tool for teaching. We propose an application example that, by using two combined systems (ACF-S and ACF-N), provides strong confirmation in the petrological interpretation.

  8. A CERES-like Cloud Property Climatology Using AVHRR Data

    Science.gov (United States)

    Minnis, P.; Bedka, K. M.; Yost, C. R.; Trepte, Q.; Bedka, S. T.; Sun-Mack, S.; Doelling, D.

    2015-12-01

    Clouds affect the climate system by modulating the radiation budget and distributing precipitation. Variations in cloud patterns and properties are expected to accompany changes in climate. The NASA Clouds and the Earth's Radiant Energy System (CERES) Project developed an end-to-end analysis system to measure broadband radiances from a radiometer and retrieve cloud properties from collocated high-resolution MODerate-resolution Imaging Spectroradiometer (MODIS) data to generate a long-term climate data record of clouds and clear-sky properties and top-of-atmosphere radiation budget. The first MODIS was not launched until 2000, so the current CERES record is only 15 years long at this point. The core of the algorithms used to retrieve the cloud properties from MODIS is based on the spectral complement of the Advanced Very High Resolution Radiometer (AVHRR), which has been aboard a string of satellites since 1978. The CERES cloud algorithms were adapted for application to AVHRR data and have been used to produce an ongoing CERES-like cloud property and surface temperature product that includes an initial narrowband-based radiation budget. This presentation will summarize this new product, which covers nearly 37 years, and its comparability with cloud parameters from CERES, CALIPSO, and other satellites. Examples of some applications of this dataset are given and the potential for generating a long-term radiation budget CDR is also discussed.

  9. Changes in surface characteristics of two different resin composites after 1 year water storage: An SEM and AFM study.

    Science.gov (United States)

    Tekçe, Neslihan; Pala, Kansad; Demirci, Mustafa; Tuncer, Safa

    2016-11-01

    To evaluate changes in surface characteristics of two different resin composites after 1 year of water storage using a profilometer, Vickers hardness, scanning electron microscopy (SEM), and atomic force microscopy (AFM). A total of 46 composite disk specimens (10 mm in diameter and 2 mm thick) were fabricated using Clearfil Majesty Esthetic and Clearfil Majesty Posterior (Kuraray Medical Co, Tokyo, Japan). Ten specimens from each composite were used for surface roughness and microhardness tests (n = 10). For each composite, scanning electron microscope (SEM, n = 2) and atomic force microscope (AFM, n = 1) images were obtained after 24 h and 1 year of water storage. The data were analyzed using two-way analysis of variance and a post-hoc Bonferroni test. Microhardness values of Clearfil Majesty Esthetic decreased significantly (78.15-63.74, p = 0.015) and surface roughness values did not change after 1 year of water storage (0.36-0.39, p = 0.464). Clearfil Majesty Posterior microhardness values were quite stable (138.74-137.25, p = 0.784), and surface roughness values increased significantly (0.39-0.48, p = 0.028) over 1 year. One year of water storage caused microhardness values for Clearfil Majesty Esthetic to decrease and the surface roughness of Clearfil Majesty Posterior increased. AFM and SEM images demonstrated surface detoration of the materials after 1 year and ensured similar results with the quantitative test methods. SCANNING 38:694-700, 2016. © 2016 Wiley Periodicals, Inc. © Wiley Periodicals, Inc.

  10. GHRSST Level 3P Global Subskin Sea Surface Temperature from the Advanced Very High Resolution Radiometer (AVHRR) on the MetOp-A satellite (GDS version 1)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A global Level 3 Group for HIgh Resolution Sea Surface Temperature (GHRSST) dataset from the Advanced Very High Resolution Radiometer (AVHRR) on the MetOp-A platform...

  11. A radiolabeled peptide ligand of the hERG channel, [125I]-BeKm-1

    DEFF Research Database (Denmark)

    Angelo, Kamilla; Korolkova, Yuliya V; Grunnet, Morten

    2003-01-01

    The wild-type scorpion toxin BeKm-1, which selectively blocks human ether-a-go-go related (hERG) channels, was radiolabeled with iodine at tyrosine 11. Both the mono- and di-iodinated derivatives were found to be biologically active. In electrophysiological patch-clamp recordings mono-[127I]-BeKm-1...... had a concentration of half-maximal inhibition (IC50 value) of 27 nM, while wild-type BeKm-1 inhibited hERG channels with an IC50 value of 7 nM. Mono-[125I]-BeKm-1 was found to bind in a concentration-dependent manner and with picomolar affinity to hERG channel protein in purified membrane vesicles...... of [125I]-BeKm-1 to the hERG channel to an IC50 of 7 nM. In autoradiographic studies on rat hearts, binding of [125I]-BeKm-1 was dose-dependent and could partially be displaced by the addition of excess amounts of non-radioactive BeKm-1. The density of the radioactive signal was equally distributed...

  12. AFM ve farmaceutické technologii 3.

    OpenAIRE

    Ščuryová, Veronika

    2015-01-01

    Charles University in Prague Faculty of Pharmacy in Hradec Králové Department of Pharmaceutical Technology Student: Veronika Ščuryová Supervisor: doc. RNDr. Pavel Doležal, CSc. Title of thesis: AFM in Pharmaceutical Technology 3 The theoretical part deals first with the construction of AFM microscope, the principle of the method, determining the surface topography and regimes which can be used. Described therein are distinct advantages over previous traditional methods but also its pitfalls. ...

  13. High-speed AFM of human chromosomes in liquid

    Energy Technology Data Exchange (ETDEWEB)

    Picco, L M; Dunton, P G; Ulcinas, A; Engledew, D J; Miles, M J [H H Wills Physics Laboratory and IRC in Nanotechnology, University of Bristol, Tyndall Avenue, Bristol BS8 1TL (United Kingdom); Hoshi, O; Ushiki, T [Division of Microscopic Anatomy and Bio-Imaging, Department of Cellular Function, Niigata University Graduate School of Medical and Dental Sciences, Asahimachi-Dori 1, Niigata, 951-8150 (Japan)], E-mail: m.j.miles@bristol.ac.uk

    2008-09-24

    Further developments of the previously reported high-speed contact-mode AFM are described. The technique is applied to the imaging of human chromosomes at video rate both in air and in water. These are the largest structures to have been imaged with high-speed AFM and the first imaging in liquid to be reported. A possible mechanism that allows such high-speed contact-mode imaging without significant damage to the sample is discussed in the context of the velocity dependence of the measured lateral force on the AFM tip.

  14. Quantification of Impact of Orbital Drift on Inter-Annual Trends in AVHRR NDVI Data

    Directory of Open Access Journals (Sweden)

    Jyoteshwar R. Nagol

    2014-07-01

    Full Text Available The Normalized Difference Vegetation Index (NDVI time-series data derived from Advanced Very High Resolution Radiometer (AVHRR have been extensively used for studying inter-annual dynamics of global and regional vegetation. However, there can be significant uncertainties in the data due to incomplete atmospheric correction and orbital drift of the satellites through their active life. Access to location specific quantification of uncertainty is crucial for appropriate evaluation of the trends and anomalies. This paper provides per pixel quantification of orbital drift related spurious trends in Long Term Data Record (LTDR AVHRR NDVI data product. The magnitude and direction of the spurious trends was estimated by direct comparison with data from MODerate resolution Imaging Spectrometer (MODIS Aqua instrument, which has stable inter-annual sun-sensor geometry. The maps show presence of both positive as well as negative spurious trends in the data. After application of the BRDF correction, an overall decrease in positive trends and an increase in number of pixels with negative spurious trends were observed. The mean global spurious inter-annual NDVI trend before and after BRDF correction was 0.0016 and −0.0017 respectively. The research presented in this paper gives valuable insight into the magnitude of orbital drift related trends in the AVHRR NDVI data as well as the degree to which it is being rectified by the MODIS BRDF correction algorithm used by the LTDR processing stream.

  15. GHRSST Level 2P North Atlantic Regional Bulk Sea Surface Temperature from the Advanced Very High Resolution Radiometer (AVHRR) on the NOAA-18 satellite (GDS version 1)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A Group for HIgh Resolution Sea Surface Temperature (GHRSST) dataset for the North Atlantic Region (NAR) from the Advanced Very High Resolution Radiometer (AVHRR) on...

  16. GHRSST Level 2P North Atlantic Regional Bulk Sea Surface Temperature from the Advanced Very High Resolution Radiometer (AVHRR) on the NOAA-17 satellite (GDS version 1)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A Group for High Resolution Sea Surface Temperature (GHRSST) dataset for the North Atlantic Region (NAR) from the Advanced Very High Resolution Radiometer (AVHRR) on...

  17. GHRSST Level 2P North Atlantic Regional Bulk Sea Surface Temperature from the Advanced Very High Resolution Radiometer (AVHRR) on the NOAA-16 satellite (GDS version 1)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A Group for HIgh Resolution Sea Surface Temperature (GHRSST) dataset for the North Atlantic Region (NAR) from the Advanced Very High Resolution Radiometer (AVHRR) on...

  18. Quantification of Surface Suspended Sediments along a River Dominated Coast with NOAA AVHRR and SeaWiFS Measurements: Louisiana, USA

    Science.gov (United States)

    Myint, S. W.; Walker, N. D.

    2002-01-01

    The ability to quantify suspended sediment concentrations accurately over both time and space using satellite data has been a goal of many environmental researchers over the past few decades This study utilizes data acquired by the NOAA Advanced Very High Resolution Radiometer (AVHRR) and the Orbview-2 Sea-viewing wide field-of-view (SeaWiFS) ocean colour sensor, coupled with field measurements to develop statistical models for the estimation of near-surface suspended sediment and suspended solids "Ground truth" water samples were obtained via helicopter, small boat and automatic water sampler within a few hours of satellite overpasses The NOAA AVHRR atmospheric correction was modified for the high levels of turbidity along the Louisiana coast. Models were developed based on the field measurements and reflectance/radiance measurements in the visible and near infrared Channels of NOAA-14 and Orbview-2 SeaWiFS. The best models for predicting surface suspended sediment concentrations were obtained with a NOAA AVHRR Channel 1 (580-680nm) cubic model, Channel 2 (725-1100 nm) linear mod$ and SeaWiFs Channel 6 (660-68Onm) power modeL The suspended sediment models developed using SeaWiFS Channel 5 (545-565 nm) were inferior, a result that we attribute mainly to the atmospheric correction technique, the shallow depth of the water samples and absorption effects from non-sediment water constituents.

  19. Synthesis and AFM visualization of DNA nanostructures

    International Nuclear Information System (INIS)

    Mizuno, Rika; Haruta, Hirotaka; Morii, Takashi; Okada, Takao; Asakawa, Takeshi; Hayashi, Kenshi

    2004-01-01

    We propose a novel bottom-up approach for the fabrication of various desired nanostructures, based on self-assembly of oligonucleotides governed by Watson-Crick base pairing. Using this approach, we designed Y-shaped, closed Y-shaped, H-shaped, and hexagonal structures with oligonucleotides. These structures were autonomously fabricated simply by mixing equimolar solutions of oligonucleotides and performing hybridization. After synthesis of the nanostructures, we confirmed their validity by agarose gel electrophoresis and atomic force microscope (AFM) visualization. We detected bands of the desired molecular sizes in the gel electrophoresis and observed the desired structures by AFM analysis. We concluded that the synthesized structures were consistent with our intended design and that AFM visualization is a very useful tool for the observation of nanostructures

  20. NOAA AVHRR Clear-Sky Products over Oceans (ACSPO): Sea Surface Temperature, Clear Sky Radiances, and Aerosol Optical Depth for the Global Ocean, 2011 - present (NCEI Accession 0072979)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The AVHRR Clear-Sky Processor over Oceans, jointly developed between NESDIS STAR and OSDPD, produces AVHRR clear-sky products over oceans. ACSPO generates output...

  1. Hydration states of AFm cement phases

    Energy Technology Data Exchange (ETDEWEB)

    Baquerizo, Luis G., E-mail: luis.baquerizoibarra@holcim.com [Innovation, Holcim Technology Ltd., CH-5113 Holderbank (Switzerland); Matschei, Thomas [Innovation, Holcim Technology Ltd., CH-5113 Holderbank (Switzerland); Scrivener, Karen L. [Laboratory of Construction Materials, Ecole Polytechnique Fédérale de Lausanne, CH-1015 Lausanne (Switzerland); Saeidpour, Mahsa; Wadsö, Lars [Building Materials, Lund University, Box 124, 221 000 Lund (Sweden)

    2015-07-15

    The AFm phase, one of the main products formed during the hydration of Portland and calcium aluminate cement based systems, belongs to the layered double hydrate (LDH) family having positively charged layers and water plus charge-balancing anions in the interlayer. It is known that these phases present different hydration states (i.e. varying water content) depending on the relative humidity (RH), temperature and anion type, which might be linked to volume changes (swelling and shrinkage). Unfortunately the stability conditions of these phases are insufficiently reported. This paper presents novel experimental results on the different hydration states of the most important AFm phases: monocarboaluminate, hemicarboaluminate, strätlingite, hydroxy-AFm and monosulfoaluminate, and the thermodynamic properties associated with changes in their water content during absorption/desorption. This data opens the possibility to model the response of cementitious systems during drying and wetting and to engineer systems more resistant to harsh external conditions.

  2. Comparison of Cloud Detection Using the CERES-MODIS Ed4 and LaRC AVHRR Cloud Masks and CALIPSO Vertical Feature Mask

    Science.gov (United States)

    Trepte, Q. Z.; Minnis, P.; Palikonda, R.; Bedka, K. M.; Sun-Mack, S.

    2011-12-01

    Accurate detection of cloud amount and distribution using satellite observations is crucial in determining cloud radiative forcing and earth energy budget. The CERES-MODIS (CM) Edition 4 cloud mask is a global cloud detection algorithm for application to Terra and Aqua MODIS data with the aid of other ancillary data sets. It is used operationally for the NASA's Cloud and Earth's Radiant Energy System (CERES) project. The LaRC AVHRR cloud mask, which uses only five spectral channels, is based on a subset of the CM cloud mask which employs twelve MODIS channels. The LaRC mask is applied to AVHRR data for the NOAA Climate Data Record Program. Comparisons among the CM Ed4, and LaRC AVHRR cloud masks and the CALIPSO Vertical Feature Mask (VFM) constitute a powerful means for validating and improving cloud detection globally. They also help us understand the strengths and limitations of the various cloud retrievals which use either active and passive satellite sensors. In this paper, individual comparisons will be presented for different types of clouds over various surfaces, including daytime and nighttime, and polar and non-polar regions. Additionally, the statistics of the global, regional, and zonal cloud occurrence and amount from the CERES Ed4, AVHRR cloud masks and CALIPSO VFM will be discussed.

  3. An algorithm for the detection of the white-tide ('mucilage') phenomenon in the Adriatic Sea using AVHRR data

    International Nuclear Information System (INIS)

    Tassan, S.

    1993-01-01

    An algorithm using AVHRR data has been set up for the detection of a white tide consisting of algae secretion ('mucilage'), an event occurring in the Adriatic Sea under particular meteorological conditions. The algorithm, which includes an ad hoc procedure for cloud masking, has been tested with reference to the mucilage map obtained from the analysis of contemporary Thematic Mapper data, as well as by comparing consecutive AVHRR scenes. The main features of the exceptional mucilage phenomenon that took place in the northern basin of the Adriatic Sea in summer 1989 are shown by a time series of maps

  4. Simultaneous AFM and fluorescence imaging: A method for aligning an AFM-tip with an excitation beam using a 2D galvanometer

    Science.gov (United States)

    Moores, A. N.; Cadby, A. J.

    2018-02-01

    Correlative fluorescence and atomic force microscopy (AFM) imaging is a highly attractive technique for use in biological imaging, enabling force and mechanical measurements of particular structures whose locations are known due to the specificity of fluorescence imaging. The ability to perform these two measurements simultaneously (rather than consecutively with post-processing correlation) is highly valuable because it would allow the mechanical properties of a structure to be tracked over time as changes in the sample occur. We present an instrument which allows simultaneous AFM and fluorescence imaging by aligning an incident fluorescence excitation beam with an AFM-tip. Alignment was performed by calibrating a 2D galvanometer present in the excitation beam path and using it to reposition the incident beam. Two programs were developed (one manual and one automated) which correlate sample features between the AFM and fluorescence images, calculating the distance required to translate the incident beam towards the AFM-tip. Using this method, we were able to obtain beam-tip alignment (and therefore field-of-view alignment) from an offset of >15 μm to within one micron in two iterations of the program. With the program running alongside data acquisition for real-time feedback between AFM and optical images, this offset was maintained over a time period of several hours. Not only does this eliminate the need to image large areas with both techniques to ensure that fields-of-view overlap, but it also raises the possibility of using this instrument for tip-enhanced fluorescence applications, a technique in which super-resolution images have previously been achieved.

  5. An AFM-SIMS Nano Tomography Acquisition System

    Science.gov (United States)

    Swinford, Richard William

    An instrument, adding the capability to measure 3D volumetric chemical composition, has been constructed by me as a member of the Sanchez Nano Laboratory. The laboratory's in situ atomic force microscope (AFM) and secondary ion mass spectrometry systems (SIMS) are functional and integrated as one instrument. The SIMS utilizes a Ga focused ion beam (FIB) combined with a quadrupole mass analyzer. The AFM is comprised of a 6-axis stage, three coarse axes and three fine. The coarse stage is used for placing the AFM tip anywhere inside a (13x13x5 mm3) (xyz) volume. Thus the tip can be moved in and out of the FIB processing region with ease. The planned range for the Z-axis piezo was 60 microm, but was reduced after it was damaged from arc events. The repaired Z-axis piezo is now operated at a smaller nominal range of 18 microm (16.7 microm after pre-loading), still quite respectable for an AFM. The noise floor of the AFM is approximately 0.4 nm Rq. The voxel size for the combined instrument is targeted at 50 nm or larger. Thus 0.4 nm of xyz uncertainty is acceptable. The instrument has been used for analyzing samples using FIB beam currents of 250 pA and 5.75 nA. Coarse tip approaches can take a long time so an abbreviated technique is employed. Because of the relatively long thro of the Z piezo, the tip can be disengaged by deactivating the servo PID. Once disengaged, it can be moved laterally out of the way of the FIB-SIMS using the coarse stage. This instrument has been used to acquire volumetric data on AlTiC using AFM tip diameters of 18.9 nm and 30.6 nm. Acquisition times are very long, requiring multiple days to acquire a 50-image stack. New features to be added include auto stigmation, auto beam shift, more software automation, etc. Longer term upgrades to include a new lower voltage Z-piezo with strain-gauge feedback and a new design to extend the life for the coarse XY nano-positioners. This AFM-SIMS instrument, as constructed, has proven to be a great proof

  6. Long Term Cloud Property Datasets From MODIS and AVHRR Using the CERES Cloud Algorithm

    Science.gov (United States)

    Minnis, Patrick; Bedka, Kristopher M.; Doelling, David R.; Sun-Mack, Sunny; Yost, Christopher R.; Trepte, Qing Z.; Bedka, Sarah T.; Palikonda, Rabindra; Scarino, Benjamin R.; Chen, Yan; hide

    2015-01-01

    Cloud properties play a critical role in climate change. Monitoring cloud properties over long time periods is needed to detect changes and to validate and constrain models. The Clouds and the Earth's Radiant Energy System (CERES) project has developed several cloud datasets from Aqua and Terra MODIS data to better interpret broadband radiation measurements and improve understanding of the role of clouds in the radiation budget. The algorithms applied to MODIS data have been adapted to utilize various combinations of channels on the Advanced Very High Resolution Radiometer (AVHRR) on the long-term time series of NOAA and MetOp satellites to provide a new cloud climate data record. These datasets can be useful for a variety of studies. This paper presents results of the MODIS and AVHRR analyses covering the period from 1980-2014. Validation and comparisons with other datasets are also given.

  7. SoilGrids1km--global soil information based on automated mapping.

    Directory of Open Access Journals (Sweden)

    Tomislav Hengl

    Full Text Available BACKGROUND: Soils are widely recognized as a non-renewable natural resource and as biophysical carbon sinks. As such, there is a growing requirement for global soil information. Although several global soil information systems already exist, these tend to suffer from inconsistencies and limited spatial detail. METHODOLOGY/PRINCIPAL FINDINGS: We present SoilGrids1km--a global 3D soil information system at 1 km resolution--containing spatial predictions for a selection of soil properties (at six standard depths: soil organic carbon (g kg-1, soil pH, sand, silt and clay fractions (%, bulk density (kg m-3, cation-exchange capacity (cmol+/kg, coarse fragments (%, soil organic carbon stock (t ha-1, depth to bedrock (cm, World Reference Base soil groups, and USDA Soil Taxonomy suborders. Our predictions are based on global spatial prediction models which we fitted, per soil variable, using a compilation of major international soil profile databases (ca. 110,000 soil profiles, and a selection of ca. 75 global environmental covariates representing soil forming factors. Results of regression modeling indicate that the most useful covariates for modeling soils at the global scale are climatic and biomass indices (based on MODIS images, lithology, and taxonomic mapping units derived from conventional soil survey (Harmonized World Soil Database. Prediction accuracies assessed using 5-fold cross-validation were between 23-51%. CONCLUSIONS/SIGNIFICANCE: SoilGrids1km provide an initial set of examples of soil spatial data for input into global models at a resolution and consistency not previously available. Some of the main limitations of the current version of SoilGrids1km are: (1 weak relationships between soil properties/classes and explanatory variables due to scale mismatches, (2 difficulty to obtain covariates that capture soil forming factors, (3 low sampling density and spatial clustering of soil profile locations. However, as the SoilGrids system is

  8. A Controversial Source for a 1.2-1.5 km3 Debris Avalanche Deposit in Northern Ecuador: A Case Study of Cubilche Volcano

    Science.gov (United States)

    Mulas, M.; Bowman, L.; Roverato, M.; Larrea Marquez, P.; Casado, I.

    2017-12-01

    Debris avalanche deposits (DAD) are common products of catastrophic volcanic edifice collapses. These failure events leave peculiar horseshoe-shaped scars on the summits of stratovolcanoes. Cubilche Volcano (3826 masl), located S of the city of Ibarra (Imbabura Province) and E of the dormant Imbabura volcano, displays a distinct horseshoe-shaped scar towards the N. This post-collapse edifice that we name "Old Cubilche Volcano" (OCV) hosts an additional edifice, "Young Cubilche Volcano" (YCV), which partially covers the southern flank of OCV. Knowledge of Cubilche is critical because of its close proximity to the provincial capital of Ibarra. In fact, Imbabura edifice was built over the northwestern slope of OCV and partially covered it. The studied DAD (unknown age) has been recently linked to Imbabura Volcano as a product of its northwestern sector collapse (LePennec et al., 2011). Alternatively, previous work proposed that the DAD, covering 80 km2 and reaching >13 km distance with an estimated volume of 1.6 km3, was the product of the older OCV (Ruiz, 2003). To constrain the source of the DAD, detailed fieldwork with granulometric, petrological, and geochemical analyses of the deposit was conducted. Preliminary data points to Cubilche as the most likely source for this DAD in accordance with Ruiz (2003). The shaded relief image of the present day OCV shows that the morphology of the volcano is well-preserved on its southern, eastern, and western flanks. This allows the reconstruction of the morphology of OCV prior to the collapse through interpolation of elevation and altitude data of the preserved flanks. A DEM of the present day topography (12m horizontal resolution) obtained from TanDEM-X data was used for extrapolating the morphology. This methodology shows that the post-collapse base of the amphitheater was reconstructed by removing the relief of the present day YCV. The reconstructed topography of OCV shows that it could have been a symmetric cone, reaching

  9. GHRSST Level 3P North Atlantic Regional Subskin Sea Surface Temperature from the Advanced Very High Resolution Radiometer (AVHRR) on the MetOp-A satellite (GDS version 1)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A Group for HIgh Resolution Sea Surface Temperature (GHRSST) dataset for the North Atlantic Region (NAR) from the Advanced Very High Resolution Radiometer (AVHRR) on...

  10. A Comparison Between SST and AOT Derived from AVHRR and MODIS Data in the Frame of the CREPAD Program

    Science.gov (United States)

    Robles-Gonzalez, Cristina; Fernandez-Renau, Alix; Lopez Gordillo, Noelia; Sevilla, Angel Garcia; Suarez, Juana Santana

    2010-12-01

    Since 1997, the INTA-CREPAD (Centre for REception, Processing, Archiving and Dissemination of Earth Observation Data) program distributes freely some of the most demanded low-resolution remote sensing products: SST, Ocean Chl-a, NDVI, AOD... The data input for such products are captured at the Canary Space Station (Centro Espacial de Canarias, CEC). The data sensors received at the station and used in the CREPAD program are AVHRR, SEAWIFS and MODIS. In this study SST and AOD retrieved by CREPAD algorithms from AVHRR and the SEADAS derived SST and AOD from MODIS have compared. SST values agree very well within 0.1±0.5oC and the coefficient of correlation of the images is 0.9. AOD validation gives good results taking into account the differences in the algorithms used. Mean AOD difference at 0.630 μm is 0.01±0.05 and the correlation coefficient is 0.6.

  11. Dynamic behaviors of spin-1/2 bilayer system within Glauber-type stochastic dynamics based on the effective-field theory

    International Nuclear Information System (INIS)

    Ertaş, Mehmet; Kantar, Ersin; Keskin, Mustafa

    2014-01-01

    The dynamic phase transitions (DPTs) and dynamic phase diagrams of the kinetic spin-1/2 bilayer system in the presence of a time-dependent oscillating external magnetic field are studied by using Glauber-type stochastic dynamics based on the effective-field theory with correlations for the ferromagnetic/ferromagnetic (FM/FM), antiferromagnetic/ferromagnetic (AFM/FM) and antiferromagnetic/antiferromagnetic (AFM/AFM) interactions. The time variations of average magnetizations and the temperature dependence of the dynamic magnetizations are investigated. The dynamic phase diagrams for the amplitude of the oscillating field versus temperature were presented. The results are compared with the results of the same system within Glauber-type stochastic dynamics based on the mean-field theory. - Highlights: • The Ising bilayer system is investigated within the Glauber dynamics based on EFT. • The time variations of average order parameters to find phases are studied. • The dynamic phase diagrams are found for the different interaction parameters. • The system displays the critical points as well as a re-entrant behavior

  12. Dynamic behaviors of spin-1/2 bilayer system within Glauber-type stochastic dynamics based on the effective-field theory

    Energy Technology Data Exchange (ETDEWEB)

    Ertaş, Mehmet; Kantar, Ersin, E-mail: ersinkantar@erciyes.edu.tr; Keskin, Mustafa

    2014-05-01

    The dynamic phase transitions (DPTs) and dynamic phase diagrams of the kinetic spin-1/2 bilayer system in the presence of a time-dependent oscillating external magnetic field are studied by using Glauber-type stochastic dynamics based on the effective-field theory with correlations for the ferromagnetic/ferromagnetic (FM/FM), antiferromagnetic/ferromagnetic (AFM/FM) and antiferromagnetic/antiferromagnetic (AFM/AFM) interactions. The time variations of average magnetizations and the temperature dependence of the dynamic magnetizations are investigated. The dynamic phase diagrams for the amplitude of the oscillating field versus temperature were presented. The results are compared with the results of the same system within Glauber-type stochastic dynamics based on the mean-field theory. - Highlights: • The Ising bilayer system is investigated within the Glauber dynamics based on EFT. • The time variations of average order parameters to find phases are studied. • The dynamic phase diagrams are found for the different interaction parameters. • The system displays the critical points as well as a re-entrant behavior.

  13. Temperature-dependent imaging of living cells by AFM

    International Nuclear Information System (INIS)

    Espenel, Cedric; Giocondi, Marie-Cecile; Seantier, Bastien; Dosset, Patrice; Milhiet, Pierre-Emmanuel; Le Grimellec, Christian

    2008-01-01

    Characterization of lateral organization of plasma membranes is a prerequisite to the understanding of membrane structure-function relationships in living cells. Lipid-lipid and lipid-protein interactions are responsible for the existence of various membrane microdomains involved in cell signalization and in numerous pathologies. Developing approaches for characterizing microdomains associate identification tools like recognition imaging with high-resolution topographical imaging. Membrane properties are markedly dependent on temperature. However, mesoscopic scale topographical information of cell surface in a temperature range covering most of cell biology experimentation is still lacking. In this work we have examined the possibility of imaging the temperature-dependent behavior of eukaryotic cells by atomic force microscopy (AFM). Our results establish that the surface of living CV1 kidney cells can be imaged by AFM, between 5 and 37 deg. C, both in contact and tapping modes. These first temperature-dependent data show that large cell structures appeared essentially stable at a microscopic scale. On the other hand, as shown by contact mode AFM, the surface was highly dynamic at a mesoscopic scale, with marked changes in apparent topography, friction, and deflection signals. When keeping the scanning conditions constant, a progressive loss in the image contrast was however observed, using tapping mode, on decreasing the temperature

  14. Improving the speed of AFM by mechatronic design and modern control methods

    International Nuclear Information System (INIS)

    Schitter, Georg

    2009-01-01

    In Atomic Force Microscopy (AFM) high-performance and high-precision control of the AFM scanner and of the imaging forces is crucial. Particularly at high imaging speeds the dynamic behaviour of the scanner may cause imaging artifacts and limit the maximum imaging rate. This contribution discusses and presents recent improvements in AFM instrumentation for faster imaging by means of mechatronic design and utilizing modern control engineering methods. Combining these improvements enables AFM imaging at more than two orders of magnitudes faster than conventional AFMs. (orig.)

  15. One kilometer (1 km) electric solar wind sail tether produced automatically.

    Science.gov (United States)

    Seppänen, Henri; Rauhala, Timo; Kiprich, Sergiy; Ukkonen, Jukka; Simonsson, Martin; Kurppa, Risto; Janhunen, Pekka; Hæggström, Edward

    2013-09-01

    We produced a 1 km continuous piece of multifilament electric solar wind sail tether of μm-diameter aluminum wires using a custom made automatic tether factory. The tether comprising 90,704 bonds between 25 and 50 μm diameter wires is reeled onto a metal reel. The total mass of 1 km tether is 10 g. We reached a production rate of 70 m/24 h and a quality level of 1‰ loose bonds and 2‰ rebonded ones. We thus demonstrated that production of long electric solar wind sail tethers is possible and practical.

  16. Association between Urinary Aflatoxin (AFM1) and Dietary Intake among Adults in Hulu Langat District, Selangor, Malaysia

    OpenAIRE

    Siti Husna Sulaiman; Rosita Jamaluddin; Mohd Redzwan Sabran

    2018-01-01

    Aflatoxin is a food contaminant and its exposure through the diet is frequent and ubiquitous. A long-term dietary aflatoxin exposure has been linked to the development of liver cancer in populations with high prevalence of aflatoxin contamination in foods. Therefore, this study was conducted to identify the association between urinary aflatoxin M1 (AFM1), a biomarker of aflatoxin exposure, with the dietary intake among adults in Hulu Langat district, Selangor, Malaysia. Certain food products ...

  17. Atom-resolved AFM imaging of calcite nanoparticles in water

    Energy Technology Data Exchange (ETDEWEB)

    Imada, Hirotake; Kimura, Kenjiro [Department of Chemistry, School of Science, Kobe University, Rokko-dai, Nada, Kobe 657-8501 (Japan); Onishi, Hiroshi, E-mail: oni@kobe-u.ac.jp [Department of Chemistry, School of Science, Kobe University, Rokko-dai, Nada, Kobe 657-8501 (Japan)

    2013-06-20

    Highlights: ► An advanced frequency-modulation AFM (FM-AFM) was applied for imaging particles. ► Atom-resolved topography of nano-sized particles of calcite was observed in water. ► Locally ordered structures were found and assigned to a (104) facet of calcite. ► A promising ability of FM-AFM was demonstrated in imaging nano-sized particles. - Abstract: The atom-resolved topography of calcite nanoparticles was observed in water using a frequency-modulation atomic force microscope. Locally ordered structures were found and assigned to a (104) facet of crystalline calcite.

  18. Atom-resolved AFM imaging of calcite nanoparticles in water

    International Nuclear Information System (INIS)

    Imada, Hirotake; Kimura, Kenjiro; Onishi, Hiroshi

    2013-01-01

    Highlights: ► An advanced frequency-modulation AFM (FM-AFM) was applied for imaging particles. ► Atom-resolved topography of nano-sized particles of calcite was observed in water. ► Locally ordered structures were found and assigned to a (104) facet of calcite. ► A promising ability of FM-AFM was demonstrated in imaging nano-sized particles. - Abstract: The atom-resolved topography of calcite nanoparticles was observed in water using a frequency-modulation atomic force microscope. Locally ordered structures were found and assigned to a (104) facet of crystalline calcite

  19. 4 km NODC/RSMAS AVHRR Pathfinder v5.0 and Interim v5.0 Sea Surface Temperature (SST) Data and v5.1 SST Data for 1981-2009

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The 4 km Pathfinder effort at the National Oceanic and Atmospheric Administration (NOAA) National Oceanographic Data Center (NODC) and the University of Miami's...

  20. Sequential electrochemical oxidation and site-selective growth of nanoparticles onto AFM probes.

    Science.gov (United States)

    Wang, Haitao; Tian, Tian; Zhang, Yong; Pan, Zhiqiang; Wang, Yong; Xiao, Zhongdang

    2008-08-19

    In this work, we reported an approach for the site-selective growth of nanoparticle onto the tip apex of an atomic force microscopy (AFM) probe. The silicon AFM probe was first coated with a self-assembled monolayer (SAM) of octadecyltrichlorosilane (OTS) through a chemical vapor deposition (CVD) method. Subsequently, COOH groups were selectively generated at the tip apex of silicon AFM probes by applying an appropriate bias voltage between the tip and a flat gold electrode. The transformation of methyl to carboxylic groups at the tip apex of the AFM probe was investigated through measuring the capillary force before and after electrochemical oxidation. To prepare the nanoparticle terminated AFM probe, the oxidized AFM probe was then immersed in an aqueous solution containing positive metal ions, for example, Ag+, to bind positive metal ions to the oxidized area (COOH terminated area), followed by chemical reduction with aqueous NaBH 4 and further development (if desired) to give a metal nanoparticle-modified AFM probe. The formation of a metal nanoparticle at the tip apex of the AFM probe was confirmed by scanning electron microscopy (SEM) and energy dispersive X-ray analysis (EDXA).

  1. AMSR-E/Aqua Daily L3 12.5 km Tb, Sea Ice Conc., & Snow Depth Polar Grids V002

    Data.gov (United States)

    National Aeronautics and Space Administration — The AMSR-E/Aqua Level 3 12.5 km daily sea ice product includes 18.7 - 89.0 GHz TBs, sea ice concentration averages (asc & desc), and 5-day snow depth over sea...

  2. AFM Surface Roughness and Topography Analysis of Lithium Disilicate Glass Ceramic

    Directory of Open Access Journals (Sweden)

    M. Pantić

    2015-12-01

    Full Text Available The aim of this study is presenting AFM analysis of surface roughness of Lithium disilicate glass ceramic (IPS e.max CAD under different finishing procedure (techniques: polishing, glazing and grinding. Lithium disilicate glass ceramics is all-ceramic dental system which is characterized by high aesthetic quality and it can be freely said that properties of material provide all prosthetic requirements: function, biocompatibility and aesthetic. Experimental tests of surface roughness were investigated on 4 samples with dimensions: 18 mm length, 14 mm width and 12 mm height. Contact surfaces of three samples were treated with different finishing procedure (polishing, glazing and grinding, and the contact surface of the raw material is investigated as a fourth sample. Experimental measurements were done using the Atomic Force Microscopy (AFM of NT-MDT manufacturers, in the contact mode. All obtained results of different prepared samples are presented in the form of specific roughness parameters (Rа, Rz, Rmax, Rq and 3D surface topography.

  3. Hot-Fire Testing of a 1N AF-M315E Thruster

    Science.gov (United States)

    Burnside, Christopher G.; Pedersen, Kevin; Pierce, Charles W.

    2015-01-01

    This hot-fire test continues NASA investigation of green propellant technologies for future missions. To show the potential for green propellants to replace some hydrazine systems in future spacecraft, NASA Marshall Space Flight Center (MSFC) is continuing to embark on hot-fire test campaigns with various green propellant blends. NASA completed a hot-fire test of a 1N AF-M315E monopropellant thruster at the Marshall Space Flight Center in the small altitude test stand located in building 4205. The thruster is a ground test article used for basic performance determination and catalyst studies. The purpose of the hot-fire testing was for performance determination of a 1N size thruster and form a baseline from which to study catalyst performance and life with follow-on testing to be conducted at a later date. The thruster performed as expected. The result of the hot-fire testing are presented in this paper and presentation.

  4. The spin-3/2 Ising model AFM/AFM two-layer lattice with crystal field

    International Nuclear Information System (INIS)

    Yigit, A.; Albayrak, E.

    2010-01-01

    The spin-3/2 Ising model is investigated for the case of antiferromagnetic (AFM/AFM) interactions on the two-layer Bethe lattice by using the exact recursion relations in a pairwise approach for given coordination numbers q=3, 4 and 6 when the layers are under the influences of equal external magnetic and equal crystal fields. The ground state (GS) phase diagrams are obtained on the different planes in detail and then the temperature dependent phase diagrams of the system are calculated accordingly. It is observed that the system presents both second- and first-order phase transitions for all q, therefore, tricritical points. It was also found that the system exhibits double-critical end points and isolated points. The model also presents two Neel temperatures, TN, and the existence of which leads to the reentrant behavior.

  5. Molecular dimensions of dried glucose oxidase on a Au(1 1 1) surface studied by dynamic mode scanning force microscopy

    International Nuclear Information System (INIS)

    Otsuka, Ichiro; Yaoita, Masashi; Nagashima, Seiichi; Higano, Michi

    2005-01-01

    We have investigated the molecular dimensions of a dried single glucose oxidase (GO) molecule adsorbed on a Au(1 1 1) surface with the UHV non-contact atomic force microscopy (NC-AFM) and tapping mode atomic force microcopy (TMAFM). The smallest air-dried GO particles in a TMAFM-measured size distribution are found to be 10-11 nm wide and 0.3-0.4 nm high. We find each collapsed ellipsoidal feature with a groove in a NC-AFM image, which measured 12 nm x 10 nm x 0.5 nm. The lateral dimensions (12 nm x 10 nm) of the observed feature is close to those of a GO monomer measured by scanning tunneling microscopy (STM) [Quijin et al., 12.2 nm x 8.9 nm as the size of one wing of an opening butterfly (dimer) appeared in a STM image] and by contact mode AFM [Quinto et al., 14 nm x 8 nm]. Our value of the vertical dimension (0.5 nm) is consistent with AFM results and molecular dynamics simulations that suggest a surface-induced complete unfolding, showing the average diameter of amino acid residues

  6. Spontaneous aggregation of humic acid observed with AFM at different pH.

    Science.gov (United States)

    Colombo, Claudio; Palumbo, Giuseppe; Angelico, Ruggero; Cho, Hyen Goo; Francioso, Ornella; Ertani, Andrea; Nardi, Serenella

    2015-11-01

    Atomic force microscopy in contact (AFM-C) mode was used to investigate the molecular dynamics of leonardite humic acid (HA) aggregate formed at different pH values. HA nanoparticles dispersed at pH values ranging from 2 to 12 were observed on a mica surface under dry conditions. The most clearly resolved and well-resulted AFM images of single particle were obtained at pH 5, where HA appeared as supramolecular particles with a conic shape and a hole in the centre. Those observations suggested that HA formed under these conditions exhibited a pseudo-amphiphilic nature, with secluded hydrophobic domains and polar subunits in direct contact with hydrophilic mica surface. Based on molecular simulation methods, a lignin-carbohydrate complex (LCC) model was proposed to explain the HA ring-like morphology. The LCC model optimized the parameters of β-O-4 linkages between 14 units of 1-4 phenyl propanoid, and resulted in an optimized structure comprising 45-50 linear helical molecules looped spirally around a central cavity. Those results added new insights on the adsorption mechanism of HA on polar surfaces as a function of pH, which was relevant from the point of view of natural aggregation in soil environment. Copyright © 2015 Elsevier Ltd. All rights reserved.

  7. Recent developments in dimensional nanometrology using AFMs

    Science.gov (United States)

    Yacoot, Andrew; Koenders, Ludger

    2011-12-01

    Scanning probe microscopes, in particular the atomic force microscope (AFM), have developed into sophisticated instruments that, throughout the world, are no longer used just for imaging, but for quantitative measurements. A role of the national measurement institutes has been to provide traceable metrology for these instruments. This paper presents a brief overview as to how this has been achieved, highlights the future requirements for metrology to support developments in AFM technology and describes work in progress to meet this need.

  8. Recent developments in dimensional nanometrology using AFMs

    International Nuclear Information System (INIS)

    Yacoot, Andrew; Koenders, Ludger

    2011-01-01

    Scanning probe microscopes, in particular the atomic force microscope (AFM), have developed into sophisticated instruments that, throughout the world, are no longer used just for imaging, but for quantitative measurements. A role of the national measurement institutes has been to provide traceable metrology for these instruments. This paper presents a brief overview as to how this has been achieved, highlights the future requirements for metrology to support developments in AFM technology and describes work in progress to meet this need. (perspective)

  9. Multiple regimes of operation in bimodal AFM: understanding the energy of cantilever eigenmodes

    Directory of Open Access Journals (Sweden)

    Daniel Kiracofe

    2013-06-01

    Full Text Available One of the key goals in atomic force microscopy (AFM imaging is to enhance material property contrast with high resolution. Bimodal AFM, where two eigenmodes are simultaneously excited, confers significant advantages over conventional single-frequency tapping mode AFM due to its ability to provide contrast between regions with different material properties under gentle imaging conditions. Bimodal AFM traditionally uses the first two eigenmodes of the AFM cantilever. In this work, the authors explore the use of higher eigenmodes in bimodal AFM (e.g., exciting the first and fourth eigenmodes. It is found that such operation leads to interesting contrast reversals compared to traditional bimodal AFM. A series of experiments and numerical simulations shows that the primary cause of the contrast reversals is not the choice of eigenmode itself (e.g., second versus fourth, but rather the relative kinetic energy between the higher eigenmode and the first eigenmode. This leads to the identification of three distinct imaging regimes in bimodal AFM. This result, which is applicable even to traditional bimodal AFM, should allow researchers to choose cantilever and operating parameters in a more rational manner in order to optimize resolution and contrast during nanoscale imaging of materials.

  10. AFM tip-sample convolution effects for cylinder protrusions

    Science.gov (United States)

    Shen, Jian; Zhang, Dan; Zhang, Fei-Hu; Gan, Yang

    2017-11-01

    A thorough understanding about the AFM tip geometry dependent artifacts and tip-sample convolution effect is essential for reliable AFM topographic characterization and dimensional metrology. Using rigid sapphire cylinder protrusions (diameter: 2.25 μm, height: 575 nm) as the model system, a systematic and quantitative study about the imaging artifacts of four types of tips-two different pyramidal tips, one tetrahedral tip and one super sharp whisker tip-is carried out through comparing tip geometry dependent variations in AFM topography of cylinders and constructing the rigid tip-cylinder convolution models. We found that the imaging artifacts and the tip-sample convolution effect are critically related to the actual inclination of the working cantilever, the tip geometry, and the obstructive contacts between the working tip's planes/edges and the cylinder. Artifact-free images can only be obtained provided that all planes and edges of the working tip are steeper than the cylinder sidewalls. The findings reported here will contribute to reliable AFM characterization of surface features of micron or hundreds of nanometers in height that are frequently met in semiconductor, biology and materials fields.

  11. Remote sensing of biomass burning in West Africa with NOAA-AVHRR

    International Nuclear Information System (INIS)

    Brustet, J.M.; Vickos, J.B.; Fontan, J.; Manissadjan, K.; Podaire, A.; Lavenu, F.

    1991-01-01

    Remote sensing measurements provide a valuable means of determining the extent of burning areas and estimating the overall distribution of the sources in time and space. The Advanced Very High Resolution Radiometer (NOAA-AVHRR) satellite is well adapted to a wide coverage of the large African savanna regions. It is necessary to watch the whole area even at times other then during the dry season, since two consecutive weeks without precipitation may be sufficient to allow the bushes to catch fire. The images examined in this chapter include the whole of West Africa - namely, within latitudes 5 degree and 14 degree N and 1 degree and 11 degree W. The study has been focused on a region that contains part of the Guinea territory, Mali, the Ivory Coast, and Burkina Faso

  12. Force and Compliance Measurements on Living Cells Using Atomic Force Microscopy (AFM

    Directory of Open Access Journals (Sweden)

    Wojcikiewicz Ewa P.

    2004-01-01

    Full Text Available We describe the use of atomic force microscopy (AFM in studies of cell adhesion and cell compliance. Our studies use the interaction between leukocyte function associated antigen-1 (LFA-1/intercellular adhesion molecule-1 (ICAM-1 as a model system. The forces required to unbind a single LFA-1/ICAM-1 bond were measured at different loading rates. This data was used to determine the dynamic strength of the LFA-1/ICAM-1 complex and characterize the activation potential that this complex overcomes during its breakage. Force measurements acquired at the multiple- bond level provided insight about the mechanism of cell adhesion. In addition, the AFM was used as a microindenter to determine the mechanical properties of cells. The applications of these methods are described using data from a previous study.

  13. High cesium concentrations in groundwater in the upper 1.2 km of fractured crystalline rock - Influence of groundwater origin and secondary minerals

    Science.gov (United States)

    Mathurin, Frédéric A.; Drake, Henrik; Tullborg, Eva-Lena; Berger, Tobias; Peltola, Pasi; Kalinowski, Birgitta E.; Åström, Mats E.

    2014-05-01

    Dissolved and solid phase cesium (Cs) was studied in the upper 1.2 km of a coastal granitoid fracture network on the Baltic Shield (Äspö Hard Rock Laboratory and Laxemar area, SE Sweden). There unusually high Cs concentrations (up to 5-6 μg L-1) occur in the low-temperature (single and primary control of dissolved Cs in these systems. The high Cs concentrations in the saline groundwater is ascribed to long-term weathering of minerals, primarily Cs-enriched fracture coatings dominated by illite and mixed-layer clays and possibly wall rock micaceous minerals. The high Cs concentrations in the groundwater of marine origin are, in contrast, explained by relatively fast cation exchange reactions. As indicated by the field data and predicted by 1D solute transport modeling, alkali cations with low-energy hydration carried by intruding marine water are capable of (NH4+ in particular and K+ to some extent) replacing Cs+ on frayed edge (FES) sites on illite in the fracture coatings. The result is a rapid and persistent (at least in the order of decades) buildup of dissolved Cs concentrations in fractures where marine water flows downward. The identification of high Cs concentrations in young groundwater of marine origin and the predicted capacity of NH4+ to displace Cs from fracture solids are of particular relevance in the disposal of radioactive nuclear waste deep underground in crystalline rock.

  14. Aflatoxin M1 Contamination in Ice-Cream

    Directory of Open Access Journals (Sweden)

    R. Kazemi Darsanaki

    2013-06-01

    Full Text Available Aflatoxin M1 (AFM1 is the hydroxylated metabolite of aflatoxin B1 (AFB1 that it can be found in milk and dairy products. In this study, ELISA (Enzyme Linked Immunosorbent Assay technique was used for detection of AFM1 in ice-cream in Guilan province (Northern Iran. A total of 90 ice-cream samples was randomly obtained from different supermarkets. In 62 of the 90 ice-cream samples examined (68.88%, the presence of AFM1 was detected in concentrations between 8.4 -147.7 ng/l. The mean level of AFM1 in positive samples was 40.36 ng/l. AFM1 levels in 11 samples (12.22% were higher than the maximum tolerance limit (50 ng/l accepted by ISIRI, European Community and Codex Alimentarius.

  15. Estimation of the soil temperature from the AVHRR-NOAA satellite data applying split window algorithms

    International Nuclear Information System (INIS)

    Parra, J.C.; Acevedo, P.S.; Sobrino, J.A.; Morales, L.J.

    2006-01-01

    Four algorithms based on the technique of split-window, to estimate the land surface temperature starting from the data provided by the sensor Advanced Very High Resolution radiometer (AVHRR), on board the series of satellites of the National Oceanic and Atmospheric Administration (NOAA), are carried out. These algorithms consider corrections for atmospheric characteristics and emissivity of the different surfaces of the land. Fourteen images AVHRR-NOAA corresponding to the months of October of 2003, and January of 2004 were used. Simultaneously, measurements of soil temperature in the Carillanca hydro-meteorological station were collected in the Region of La Araucana, Chile (38 deg 41 min S; 72 deg 25 min W). Of all the used algorithms, the best results correspond to the model proposed by Sobrino and Raussoni (2000), with a media and standard deviation corresponding to the difference among the temperature of floor measure in situ and the estimated for this algorithm, of -0.06 and 2.11 K, respectively. (Author)

  16. AFM (Atomic force microscope and its use in studying the surface

    Directory of Open Access Journals (Sweden)

    Škvarla Jiří

    1996-06-01

    Full Text Available The paper summarizes the present knowledge about the use of AFM in the mineral processing research. First, the development and fundamentals of the AFM imaging are presented in relation to other imaging techniques (especially STM, Scanning tunneling microscope. Further, the role of the sensing tip-surface interactions is mentioned. Finally, the surface force measurements in the AFM force calibration mode are diskussed.

  17. Coherently wavelength injection-locking a 600-μm long cavity colorless laser diode for 16-QAM OFDM at 12 Gbit/s over 25-km SMF.

    Science.gov (United States)

    Li, Yi-Cheng; Chi, Yu-Chieh; Cheng, Min-Chi; Lu, I-Cheng; Chen, Jason; Lin, Gong-Ru

    2013-07-15

    The coherent injection-locking and directly modulation of a long-cavity colorless laser diode with 1% end-facet reflectance and weak-resonant longitudinal modes is employed as an universal optical transmitter to demonstrated for optical 16-QAM OFDM transmission at 12 Gbit/s over 25 km in a DWDM-PON system. The optimized bias current of 30 mA (~1.5Ith) with corresponding extinction ratio (ER) of 6 dB and the external injection power of -9 dBm is (are) required for such a wavelength-locked universal transmitter to carry the 16-QAM and 122-subcarrier formatted OFDM and data-stream. By increasing external injection-locking from -9 dBm to 0 dBm, the peak-to-peak chirp of the OFDM data stream reduces from 7.7 to 5.4 GHz. The side mode suppression ratio (SMSR) of up to 50 dB is achieved with wider detuning range between -0.5 nm to 2.0 nm under an injection power of 0 dBm. By modulating such a colorless laser diode with an OFDM data stream of 122 subcarriers at a central carrier frequency of 1.5625 GHz and a total bandwidth of 3 GHz, the transmission data rate of up to 12 Gbit/s in standard single-mode fiber over 25 km is demonstrated to achieve an error vector magnitude (EVM) of 5.435%. Such a universal colorless DWDM-PON transmitter can deliver the optical OFDM data-stream at 12 Gbit/s QAM-OFDM data after 25-km transmission with a receiving power sensitivity of -7 dBm at BER of 3.6 × 10(-7) when pre-amplifying the OFDM data by 5 dB.

  18. Comparison and Evaluation of Annual NDVI Time Series in China Derived from the NOAA AVHRR LTDR and Terra MODIS MOD13C1 Products.

    Science.gov (United States)

    Guo, Xiaoyi; Zhang, Hongyan; Wu, Zhengfang; Zhao, Jianjun; Zhang, Zhengxiang

    2017-06-06

    Time series of Normalized Difference Vegetation Index (NDVI) derived from multiple satellite sensors are crucial data to study vegetation dynamics. The Land Long Term Data Record Version 4 (LTDR V4) NDVI dataset was recently released at a 0.05 × 0.05° spatial resolution and daily temporal resolution. In this study, annual NDVI time series that are composited by the LTDR V4 and Moderate Resolution Imaging Spectroradiometer (MODIS) NDVI datasets (MOD13C1) are compared and evaluated for the period from 2001 to 2014 in China. The spatial patterns of the NDVI generally match between the LTDR V4 and MOD13C1 datasets. The transitional zone between high and low NDVI values generally matches the boundary of semi-arid and sub-humid regions. A significant and high coefficient of determination is found between the two datasets according to a pixel-based correlation analysis. The spatially averaged NDVI of LTDR V4 is characterized by a much weaker positive regression slope relative to that of the spatially averaged NDVI of the MOD13C1 dataset because of changes in NOAA AVHRR sensors between 2005 and 2006. The measured NDVI values of LTDR V4 were always higher than that of MOD13C1 in western China due to the relatively lower atmospheric water vapor content in western China, and opposite observation appeared in eastern China. In total, 18.54% of the LTDR V4 NDVI pixels exhibit significant trends, whereas 35.79% of the MOD13C1 NDVI pixels show significant trends. Good agreement is observed between the significant trends of the two datasets in the Northeast Plain, Bohai Economic Rim, Loess Plateau, and Yangtze River Delta. By contrast, the datasets contrasted in northwestern desert regions and southern China. A trend analysis of the regression slope values according to the vegetation type shows good agreement between the LTDR V4 and MOD13C1 datasets. This study demonstrates the spatial and temporal consistencies and discrepancies between the AVHRR LTDR and MODIS MOD13C1 NDVI

  19. Helium ion beam induced growth of hammerhead AFM probes

    NARCIS (Netherlands)

    Nanda, G.; Veldhoven, E. van; Maas, D.J.; Sadeghian Marnani, H.; Alkemade, P.F.A.

    2015-01-01

    The authors report the direct-write growth of hammerhead atomic force microscope (AFM) probes by He+ beam induced deposition of platinum-carbon. In order to grow a thin nanoneedle on top of a conventional AFM probe, the authors move a focused He+ beam during exposure to a PtC precursor gas. In the

  20. Immobilisation of living bacteria for AFM imaging under physiological conditions

    International Nuclear Information System (INIS)

    Louise Meyer, Rikke; Zhou, Xingfei; Tang, Lone; Arpanaei, Ayyoob; Kingshott, Peter; Besenbacher, Flemming

    2010-01-01

    Atomic force microscopy (AFM) holds great potential for studying the nanoscale surface structures of living cells, and to measure their interactions with abiotic surfaces, other cells, or specific biomolecules. However, the application of AFM in microbiology is challenging due to the difficulty of immobilising bacterial cells to a flat surface without changing the cell surface properties or cell viability. We have performed an extensive and thorough study of how to functionalise surfaces in order to immobilise living bacteria for AFM studies in liquid environments. Our aim was to develop a scheme which allows bacterial cells to be immobilised to a flat surface with sufficient strength to avoid detachment during the AFM scanning, and without affecting cell surface chemistry, structure, and viability. We compare and evaluate published methods, and present a new, reproducible, and generally applicable scheme for immobilising bacteria cells for an AFM imaging. Bacterial cells were immobilised to modified glass surfaces by physical confinement of cells in microwells, physisorption to positively charged surfaces, covalent binding to amine- or carboxyl-terminated surfaces, and adsorption to surfaces coated with highly adhesive polyphenolic proteins originating from the mussel Mytilus edulis. Living cells could be immobilised with all of these approaches, but many cells detached when immobilised by electrostatic interactions and imaged in buffers like PBS or MOPS. Cells were more firmly attached when immobilised by covalent binding, although some cells still detached during AFM imaging. The most successful method revealed was immobilisation by polyphenolic proteins, which facilitated firm immobilisation of the cells. Furthermore, the cell viability was not affected by this immobilisation scheme, and adhesive proteins thus provide a fast, reproducible, and generally applicable scheme for immobilising living bacteria for an AFM imaging.

  1. In-flight interband calibration on AVHRR data by a cloud-viewing technique

    OpenAIRE

    Wald , Lucien

    1997-01-01

    ISBN 90-5410-933-5; International audience; A significant degradation in the responsivity of the AVHRR radiometers aboard the NOAA satellite series, affects the index vegetation (NDVI), which is an important source of information for monitoring vegetation conditions on regional and global scales. Many studies have been carried out which use the viewing Earth calibration approach in order to provide accurate calibration correction coefficients for the computation of the vegetation index using ...

  2. AFM measurements of novel solar cells. Studying electronic properties of Si-based radial junctions

    Czech Academy of Sciences Publication Activity Database

    Hývl, Matěj

    -, č. 1 (2014), s. 52-53 ISSN 1439-4243 R&D Projects: GA ČR GA13-25747S; GA ČR GA13-12386S; GA MŠk(CZ) LM2011026 Institutional support: RVO:68378271 Keywords : AFM measurements * conductive cantilever * electronic properties * nanowires * PF TUNA Subject RIV: BM - Solid Matter Physics ; Magnetism http://www.imaging-git.com/science/scanning-probe-microscopy/afm-measurements-novel-solar- cells

  3. MODIS/Terra Geolocation Fields 5-Min L1A Swath 1km V005

    Data.gov (United States)

    National Aeronautics and Space Administration — The geolocation fields are calculated for each 1 km MODIS Instantaneous Field of Views (IFOV) for all orbits daily. The locations and ancillary information...

  4. Optimization of specimen preparation of thin cell section for AFM observation

    Energy Technology Data Exchange (ETDEWEB)

    Li Xinhui [Nanobiology Laboratory, Bio-X Life Science Research Center, School of Life Science and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Minhang District, Shanghai 200240 (China); Ji Tong [Department of Oral and Maxillofacial Surgery, School of Stomatology, Affiliated Ninth People' s Hospital, Medical School, Shanghai Jiao Tong University, Shanghai 200011 (China); Hu Jun [Nanobiology Laboratory, Bio-X Life Science Research Center, School of Life Science and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Minhang District, Shanghai 200240 (China); Shanghai Institute of Applied Physics, Chinese Academy of Sciences, Shanghai 201800 (China); Sun Jielin [Nanobiology Laboratory, Bio-X Life Science Research Center, School of Life Science and Biotechnology, Shanghai Jiao Tong University, 800 Dongchuan Road, Minhang District, Shanghai 200240 (China)], E-mail: jlsun@sjtu.edu.cn

    2008-08-15

    High resolution imaging of intracellular structures of ultrathin cell section samples is critical to the performance of precise manipulation by atomic force microscopy (AFM). Here, we test the effect of multiple factors during section sample preparation on the quality of the AFM image. These factors include the embedding materials, the annealing process of the specimen block, section thickness, and section side. We found that neither the embedding materials nor the temperature and speed of the annealing process has any effect on AFM image resolution. However, the section thickness and section side significantly affect the surface topography and AFM image resolution. By systematically testing the image quality of both sides of cell sections over a wide range of thickness (40-1000 nm), we found that the best resolution was obtained with upper-side sections approximately 50-100 nm thick. With these samples, we could observe precise structure details of the cell, including its membrane, nucleoli, and other organelles. Similar results were obtained for other cell types, including Tca8113, C6, and ECV-304. In brief, by optimizing the condition of ultrathin cell section preparation, we were able to obtain high resolution intracellular AFM images, which provide an essential basis for further AFM manipulation.

  5. AFM topographies of densely packed nanoparticles: a quick way to determine the lateral size distribution by autocorrelation function analysis

    Czech Academy of Sciences Publication Activity Database

    Fekete, Ladislav; Kůsová, Kateřina; Petrák, Václav; Kratochvílová, Irena

    2012-01-01

    Roč. 14, č. 8 (2012), s. 1-10 ISSN 1388-0764 R&D Projects: GA AV ČR KAN200100801; GA TA ČR TA01011165; GA ČR(CZ) GAP304/10/1951; GA ČR GPP204/12/P235 Institutional research plan: CEZ:AV0Z10100520 Keywords : lateral grain size distribution * AFM * autocorrelation function * nanodiamond Subject RIV: BM - Solid Matter Physics ; Magnetism Impact factor: 2.175, year: 2012

  6. LET spectrum measurements in Cr-39 PNTD with AFM

    Energy Technology Data Exchange (ETDEWEB)

    Johnson, Carl Edward [Los Alamos National Laboratory; De Witt, Joel M [OSU, PHYSICS; Benton, Eric R [OSU, PHYSICS; Yasuda, Nakahiro [NIRS, HIMAC; Benton, Eugene V [UNIV OF SAN FRANCISCO

    2010-01-01

    Energetic protons, neutrons, and heavy ions undergoing collisions with target nuclei of varying Z can produce residual heavy recoil fragments via intra-nuclear cascade/evaporation reactions. The particles produced in these non-elastic collisions generally have such extremely short range ({approx}< 10 {mu}m) that they cannot be directly observed by conventional detection methods including CR-39 plastic nuclear track detector (PNTD) that has been chemically etched for analysis by standard visible light microscopy. However, high-LET recoil fragments having range on the order of several cell diameters can be produced in tissue during radiotherapy using proton and carbon beams. We have developed a method to analyze short-range, high-LET tracks in CR-39 plastic nuclear track detector (PNTD) using short duration chemical etching ({approx}< 1 {mu}m) followed by automated atomic force microscope (AFM) scanning. The post-scan data processing used in this work was based on semi-automated matrix analysis opposed to traditional grey-scale image analysis. This method takes advantage of the 3-D data obtained via AFM to achieve robust discrimination of nuclear tracks from other features. Through automation of AFM scanning, sufficient AFM scan frames were obtained to attain an LET spectrum spanning the LET range from 200-1500 keV/{mu}m. In addition to our experiments, simulations were carried out with the Monte Carlo transport code, FLUKA. To demonstrate this method, CR-39 PNTD was exposed to the proton therapy beam at Loma Linda University Medical Center (LLUMC) at 60 and 230 MeV. Additionally, detectors were exposed to I GeV protons at the NASA Space Radiation Laboratory (NSRL) at Brookhaven National Laboratory (BNL). For these exposures CR-39 PNTD, Al and Cu target foils were used between detector layers.

  7. LET spectrum measurements in Cr-39 PNTD with AFM

    International Nuclear Information System (INIS)

    Johnson, Carl Edward; DeWitt, Joel M.; Benton, Eric R.; Yasuda, Nakahiro; Benton, Eugene V.

    2010-01-01

    Energetic protons, neutrons, and heavy ions undergoing collisions with target nuclei of varying Z can produce residual heavy recoil fragments via intra-nuclear cascade/evaporation reactions. The particles produced in these non-elastic collisions generally have such extremely short range (∼< 10 μm) that they cannot be directly observed by conventional detection methods including CR-39 plastic nuclear track detector (PNTD) that has been chemically etched for analysis by standard visible light microscopy. However, high-LET recoil fragments having range on the order of several cell diameters can be produced in tissue during radiotherapy using proton and carbon beams. We have developed a method to analyze short-range, high-LET tracks in CR-39 plastic nuclear track detector (PNTD) using short duration chemical etching (∼< 1 μm) followed by automated atomic force microscope (AFM) scanning. The post-scan data processing used in this work was based on semi-automated matrix analysis opposed to traditional grey-scale image analysis. This method takes advantage of the 3-D data obtained via AFM to achieve robust discrimination of nuclear tracks from other features. Through automation of AFM scanning, sufficient AFM scan frames were obtained to attain an LET spectrum spanning the LET range from 200-1500 keV/μm. In addition to our experiments, simulations were carried out with the Monte Carlo transport code, FLUKA. To demonstrate this method, CR-39 PNTD was exposed to the proton therapy beam at Loma Linda University Medical Center (LLUMC) at 60 and 230 MeV. Additionally, detectors were exposed to I GeV protons at the NASA Space Radiation Laboratory (NSRL) at Brookhaven National Laboratory (BNL). For these exposures CR-39 PNTD, Al and Cu target foils were used between detector layers.

  8. SoilGrids1km — Global Soil Information Based on Automated Mapping

    Science.gov (United States)

    Hengl, Tomislav; de Jesus, Jorge Mendes; MacMillan, Robert A.; Batjes, Niels H.; Heuvelink, Gerard B. M.; Ribeiro, Eloi; Samuel-Rosa, Alessandro; Kempen, Bas; Leenaars, Johan G. B.; Walsh, Markus G.; Gonzalez, Maria Ruiperez

    2014-01-01

    Background Soils are widely recognized as a non-renewable natural resource and as biophysical carbon sinks. As such, there is a growing requirement for global soil information. Although several global soil information systems already exist, these tend to suffer from inconsistencies and limited spatial detail. Methodology/Principal Findings We present SoilGrids1km — a global 3D soil information system at 1 km resolution — containing spatial predictions for a selection of soil properties (at six standard depths): soil organic carbon (g kg−1), soil pH, sand, silt and clay fractions (%), bulk density (kg m−3), cation-exchange capacity (cmol+/kg), coarse fragments (%), soil organic carbon stock (t ha−1), depth to bedrock (cm), World Reference Base soil groups, and USDA Soil Taxonomy suborders. Our predictions are based on global spatial prediction models which we fitted, per soil variable, using a compilation of major international soil profile databases (ca. 110,000 soil profiles), and a selection of ca. 75 global environmental covariates representing soil forming factors. Results of regression modeling indicate that the most useful covariates for modeling soils at the global scale are climatic and biomass indices (based on MODIS images), lithology, and taxonomic mapping units derived from conventional soil survey (Harmonized World Soil Database). Prediction accuracies assessed using 5–fold cross-validation were between 23–51%. Conclusions/Significance SoilGrids1km provide an initial set of examples of soil spatial data for input into global models at a resolution and consistency not previously available. Some of the main limitations of the current version of SoilGrids1km are: (1) weak relationships between soil properties/classes and explanatory variables due to scale mismatches, (2) difficulty to obtain covariates that capture soil forming factors, (3) low sampling density and spatial clustering of soil profile locations. However, as the Soil

  9. SST, Pathfinder Ver 5.0, Night, 4.4 km, Global, Science Quality

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — AVHRR Pathfinder Oceans Project seeks to create a long-term, continuous sea surface temperature data series for use in climate research. The Pathfinder SST data...

  10. SST, Pathfinder Ver 5.0, Day, 4.4 km, Global, Science Quality

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — AVHRR Pathfinder Oceans Project seeks to create a long-term, continuous sea surface temperature data series for use in climate research. The Pathfinder SST data...

  11. High-speed AFM for Studying Dynamic Biomolecular Processes

    Science.gov (United States)

    Ando, Toshio

    2008-03-01

    Biological molecules show their vital activities only in aqueous solutions. It had been one of dreams in biological sciences to directly observe biological macromolecules (protein, DNA) at work under a physiological condition because such observation is straightforward to understanding their dynamic behaviors and functional mechanisms. Optical microscopy has no sufficient spatial resolution and electron microscopy is not applicable to in-liquid samples. Atomic force microscopy (AFM) can visualize molecules in liquids at high resolution but its imaging rate was too low to capture dynamic biological processes. This slow imaging rate is because AFM employs mechanical probes (cantilevers) and mechanical scanners to detect the sample height at each pixel. It is quite difficult to quickly move a mechanical device of macroscopic size with sub-nanometer accuracy without producing unwanted vibrations. It is also difficult to maintain the delicate contact between a probe tip and fragile samples. Two key techniques are required to realize high-speed AFM for biological research; fast feedback control to maintain a weak tip-sample interaction force and a technique to suppress mechanical vibrations of the scanner. Various efforts have been carried out in the past decade to materialize high-speed AFM. The current high-speed AFM can capture images on video at 30-60 frames/s for a scan range of 250nm and 100 scan lines, without significantly disturbing week biomolecular interaction. Our recent studies demonstrated that this new microscope can reveal biomolecular processes such as myosin V walking along actin tracks and association/dissociation dynamics of chaperonin GroEL-GroES that occurs in a negatively cooperative manner. The capacity of nanometer-scale visualization of dynamic processes in liquids will innovate on biological research. In addition, it will open a new way to study dynamic chemical/physical processes of various phenomena that occur at the liquid-solid interfaces.

  12. Adhesion forces in AFM of redox responsive polymer grafts: Effects of tip hydrophilicity

    NARCIS (Netherlands)

    Feng, Xueling; Kieviet, B.D.; Song, Jing; Schön, Peter Manfred; Vancso, Gyula J.

    2014-01-01

    The adherence between silicon nitride AFM tips and redox-active poly(ferrocenylsilanes) (PFS) grafts ongold was investigated by electrochemical AFM force spectroscopy. Before the adhesion measurementssilicon nitride AFM probes were cleaned with organic solvents (acetone and ethanol) or piranha

  13. NOAA Climate Data Record (CDR) of Cloud Properties from AVHRR Pathfinder Atmospheres - Extended (PATMOS-x), Version 5.3

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — This NOAA Climate Data Record (CDR) of cloud products was produced by the University of Wisconsin using the AVHRR Pathfinder Atmospheres - Extended (PATMOS-X)...

  14. Micromechanical Characterization of Complex Polypropylene Morphologies by HarmoniX AFM

    Directory of Open Access Journals (Sweden)

    S. Liparoti

    2017-01-01

    Full Text Available This paper examines the capability of the HarmoniX Atomic Force Microscopy (AFM technique to draw accurate and reliable micromechanical characterization of complex polymer morphologies generally found in conventional thermoplastic polymers. To that purpose, injection molded polypropylene samples, containing representative morphologies, have been characterized by HarmoniX AFM. Mapping and distributions of mechanical properties of the samples surface are determined and analyzed. Effects of sample preparation and test conditions are also analyzed. Finally, the AFM determination of surface elastic moduli has been compared with that obtained by indentation tests, finding good agreement among the results.

  15. Noise in NC-AFM measurements with significant tip–sample interaction

    Directory of Open Access Journals (Sweden)

    Jannis Lübbe

    2016-12-01

    Full Text Available The frequency shift noise in non-contact atomic force microscopy (NC-AFM imaging and spectroscopy consists of thermal noise and detection system noise with an additional contribution from amplitude noise if there are significant tip–sample interactions. The total noise power spectral density DΔf(fm is, however, not just the sum of these noise contributions. Instead its magnitude and spectral characteristics are determined by the strongly non-linear tip–sample interaction, by the coupling between the amplitude and tip–sample distance control loops of the NC-AFM system as well as by the characteristics of the phase locked loop (PLL detector used for frequency demodulation. Here, we measure DΔf(fm for various NC-AFM parameter settings representing realistic measurement conditions and compare experimental data to simulations based on a model of the NC-AFM system that includes the tip–sample interaction. The good agreement between predicted and measured noise spectra confirms that the model covers the relevant noise contributions and interactions. Results yield a general understanding of noise generation and propagation in the NC-AFM and provide a quantitative prediction of noise for given experimental parameters. We derive strategies for noise-optimised imaging and spectroscopy and outline a full optimisation procedure for the instrumentation and control loops.

  16. Ultra-large scale AFM of lipid droplet arrays: investigating the ink transfer volume in dip pen nanolithography

    International Nuclear Information System (INIS)

    Förste, Alexander; Pfirrmann, Marco; Sachs, Johannes; Gröger, Roland; Walheim, Stefan; Brinkmann, Falko; Hirtz, Michael; Fuchs, Harald; Schimmel, Thomas

    2015-01-01

    There are only few quantitative studies commenting on the writing process in dip-pen nanolithography with lipids. Lipids are important carrier ink molecules for the delivery of bio-functional patters in bio-nanotechnology. In order to better understand and control the writing process, more information on the transfer of lipid material from the tip to the substrate is needed. The dependence of the transferred ink volume on the dwell time of the tip on the substrate was investigated by topography measurements with an atomic force microscope (AFM) that is characterized by an ultra-large scan range of 800 × 800 μm 2 . For this purpose arrays of dots of the phospholipid1,2-dioleoyl-sn-glycero-3-phosphocholine were written onto planar glass substrates and the resulting pattern was imaged by large scan area AFM. Two writing regimes were identified, characterized of either a steady decline or a constant ink volume transfer per dot feature. For the steady state ink transfer, a linear relationship between the dwell time and the dot volume was determined, which is characterized by a flow rate of about 16 femtoliters per second. A dependence of the ink transport from the length of pauses before and in between writing the structures was observed and should be taken into account during pattern design when aiming at best writing homogeneity. The ultra-large scan range of the utilized AFM allowed for a simultaneous study of the entire preparation area of almost 1 mm 2 , yielding good statistic results. (paper)

  17. Ultra-large scale AFM of lipid droplet arrays: investigating the ink transfer volume in dip pen nanolithography

    Science.gov (United States)

    Förste, Alexander; Pfirrmann, Marco; Sachs, Johannes; Gröger, Roland; Walheim, Stefan; Brinkmann, Falko; Hirtz, Michael; Fuchs, Harald; Schimmel, Thomas

    2015-05-01

    There are only few quantitative studies commenting on the writing process in dip-pen nanolithography with lipids. Lipids are important carrier ink molecules for the delivery of bio-functional patters in bio-nanotechnology. In order to better understand and control the writing process, more information on the transfer of lipid material from the tip to the substrate is needed. The dependence of the transferred ink volume on the dwell time of the tip on the substrate was investigated by topography measurements with an atomic force microscope (AFM) that is characterized by an ultra-large scan range of 800 × 800 μm2. For this purpose arrays of dots of the phospholipid1,2-dioleoyl-sn-glycero-3-phosphocholine were written onto planar glass substrates and the resulting pattern was imaged by large scan area AFM. Two writing regimes were identified, characterized of either a steady decline or a constant ink volume transfer per dot feature. For the steady state ink transfer, a linear relationship between the dwell time and the dot volume was determined, which is characterized by a flow rate of about 16 femtoliters per second. A dependence of the ink transport from the length of pauses before and in between writing the structures was observed and should be taken into account during pattern design when aiming at best writing homogeneity. The ultra-large scan range of the utilized AFM allowed for a simultaneous study of the entire preparation area of almost 1 mm2, yielding good statistic results.

  18. Cell visco-elasticity measured with AFM and optical trapping at sub-micrometer deformations.

    Directory of Open Access Journals (Sweden)

    Schanila Nawaz

    Full Text Available The measurement of the elastic properties of cells is widely used as an indicator for cellular changes during differentiation, upon drug treatment, or resulting from the interaction with the supporting matrix. Elasticity is routinely quantified by indenting the cell with a probe of an AFM while applying nano-Newton forces. Because the resulting deformations are in the micrometer range, the measurements will be affected by the finite thickness of the cell, viscous effects and even cell damage induced by the experiment itself. Here, we have analyzed the response of single 3T3 fibroblasts that were indented with a micrometer-sized bead attached to an AFM cantilever at forces from 30-600 pN, resulting in indentations ranging from 0.2 to 1.2 micrometer. To investigate the cellular response at lower forces up to 10 pN, we developed an optical trap to indent the cell in vertical direction, normal to the plane of the coverslip. Deformations of up to two hundred nanometers achieved at forces of up to 30 pN showed a reversible, thus truly elastic response that was independent on the rate of deformation. We found that at such small deformations, the elastic modulus of 100 Pa is largely determined by the presence of the actin cortex. At higher indentations, viscous effects led to an increase of the apparent elastic modulus. This viscous contribution that followed a weak power law, increased at larger cell indentations. Both AFM and optical trapping indentation experiments give consistent results for the cell elasticity. Optical trapping has the benefit of a lower force noise, which allows a more accurate determination of the absolute indentation. The combination of both techniques allows the investigation of single cells at small and large indentations and enables the separation of their viscous and elastic components.

  19. Direct manipulation of intracellular stress fibres using a hook-shaped AFM probe

    International Nuclear Information System (INIS)

    Machida, Shinichi; Watanabe-Nakayama, Takahiro; Harada, Ichiro; Afrin, Rehana; Nakayama, Tomonobu; Ikai, Atsushi

    2010-01-01

    Atomic force microscopy (AFM) is a highly successful technique for imaging nanometre-sized samples and measuring pico- to nano-newton forces acting between atoms and molecules. When it comes to the manipulation of larger samples with forces of tens and hundreds of nano-newtons, however, the present chemistry-based modification protocols for functionalizing AFM cantilevers to achieve the formation of covalent/non-covalent linkages between the AFM probe and the sample surface do not produce strong enough bonds. For the purpose of measuring the fracture strength and other mechanical properties of stress fibres (SFs) in living as well as semi-intact fibroblast cells, we fabricated an AFM probe with a hooking function by focused ion beam technology and used the AFM probe hook to capture, pull and eventually sever a chosen SF labelled with green or red fluorescent protein.

  20. High-order study of the quantum critical behavior of a frustrated spin-1/2 antiferromagnet on a stacked honeycomb bilayer

    Science.gov (United States)

    Bishop, R. F.; Li, P. H. Y.

    2017-12-01

    We study a frustrated spin-1/2 J1-J2-J3-J1⊥ Heisenberg antiferromagnet on an A A -stacked bilayer honeycomb lattice. In each layer we consider nearest-neighbor (NN), next-nearest-neighbor, and next-next-nearest-neighbor antiferromagnetic (AFM) exchange couplings J1,J2 , and J3, respectively. The two layers are coupled with an AFM NN exchange coupling J1⊥≡δ J1 . The model is studied for arbitrary values of δ along the line J3=J2≡α J1 that includes the most highly frustrated point at α =1/2 , where the classical ground state is macroscopically degenerate. The coupled cluster method is used at high orders of approximation to calculate the magnetic order parameter and the triplet spin gap. We are thereby able to give an accurate description of the quantum phase diagram of the model in the α δ plane in the window 0 ≤α ≤1 ,0 ≤δ ≤1 . This includes two AFM phases with Néel and striped order, and an intermediate gapped paramagnetic phase that exhibits various forms of valence-bond crystalline order. We obtain accurate estimations of the two phase boundaries, δ =δci(α) , or equivalently, α =αc i(δ ) , with i =1 (Néel) and 2 (striped). The two boundaries exhibit an "avoided crossing" behavior with both curves being re-entrant. Thus, in this α δ window, Néel order exists only for values of δ in the range δc1 (α ) , with δc1 0 for αc 1(0 ) ≈0.49 (1 ) , and striped order similarly exists only for values of δ in the range δc2 (α ) , with δc2 αc2(0) ≈0.600 (5 ) and δc2 0 for αc 2(0 ) >α >α2<≈0.56 (1 ) .

  1. Application of AFM in microscopy and fabrication of micro/nanostructures

    Czech Academy of Sciences Publication Activity Database

    Lopour, F.; Kalousek, R.; Škoda, D.; Spousta, J.; Matějka, František; Šikola, T.

    2002-01-01

    Roč. 34, č. 1 (2002), s. 352 - 355 ISSN 0142-2421 R&D Projects: GA MŠk ME 334; GA MŠk ME 480 Institutional research plan: CEZ:AV0Z2065902 Keywords : AFM fabrication * local anodic oxidation * oxide nanostructures Subject RIV: JA - Electronics ; Optoelectronics, Electrical Engineering Impact factor: 1.071, year: 2002

  2. Examination of Regional Trends in Cloud Properties over Surface Sites Derived from MODIS and AVHRR using the CERES Cloud Algorithm

    Science.gov (United States)

    Smith, W. L., Jr.; Minnis, P.; Bedka, K. M.; Sun-Mack, S.; Chen, Y.; Doelling, D. R.; Kato, S.; Rutan, D. A.

    2017-12-01

    Recent studies analyzing long-term measurements of surface insolation at ground sites suggest that decadal-scale trends of increasing (brightening) and decreasing (dimming) downward solar flux have occurred at various times over the last century. Regional variations have been reported that range from near 0 Wm-2/decade to as large as 9 Wm-2/decade depending on the location and time period analyzed. The more significant trends have been attributed to changes in overhead clouds and aerosols, although quantifying their relative impacts using independent observations has been difficult, owing in part to a lack of consistent long-term measurements of cloud properties. This paper examines new satellite based records of cloud properties derived from MODIS (2000-present) and AVHRR (1981- present) data to infer cloud property trends over a number of surface radiation sites across the globe. The MODIS cloud algorithm was developed for the NASA Clouds and the Earth's Radiant Energy System (CERES) project to provide a consistent record of cloud properties to help improve broadband radiation measurements and to better understand cloud radiative effects. The CERES-MODIS cloud algorithm has been modified to analyze other satellites including the AVHRR on the NOAA satellites. Compared to MODIS, obtaining consistent cloud properties over a long period from AVHRR is a much more significant challenge owing to the number of different satellites, instrument calibration uncertainties, orbital drift and other factors. Nevertheless, both the MODIS and AVHRR cloud properties will be analyzed to determine trends, and their level of consistency and correspondence with surface radiation trends derived from the ground-based radiometer data. It is anticipated that this initial study will contribute to an improved understanding of surface solar radiation trends and their relationship to clouds.

  3. Plasmid (pKM101)-mediated enhancement of repair and mutagenesis: dependence on chromosomal genes in 'Escherichia coli' K-12

    International Nuclear Information System (INIS)

    Walker, G.C.

    1977-01-01

    The drug resistance plasmid pKM101 plays a major role in the Ames Salmonella/microsome carcinogen detecting system by enhancing chemical mutagenesis. It is shown that in Escherichia coli K-12 the plasmid pKM101 enhances both spontaneous and methyl methanesulfonate-caused reversion of an ochre mutation, bacterial survival after ultaviolet irradiation, and reactivation of ultraviolet-irradiated lambda in unirradiated cells. All these effects are shown to be dependent on the recA + lexA + genotype but not on the recB + recC + or recF + genotypes. The recA lexA-dependence of the plasmid-mediated repair and mutagenesis suggests an interaction with the cell's inducible error-prone repair system. The presence of pKM101 is shown to cause an additional increase in methyl methanesulfonate mutagenesis in a tif mutant beyond that caused by growth at 42 0 . The presence of the plasmid raises the level of the Weigle-reactivation curve for the reactivation of ultraviolet-irradiated lambda in E. coli and causes a shift of the maximum to a higher UV fluence. These observations suggest that pKM101 does not exert its effects by altering the regulation of the cell's error-prone repair system but rather by supplying a mechanistic component or components. (orig.) [de

  4. Cuticle scale measurement of animal fibers by SEM and AFM

    CSIR Research Space (South Africa)

    Notayi, M

    2013-12-01

    Full Text Available -1 51st Microscopy Society of Southern Africa (MSSA) Conference, Farm Inn, Pretoria, 3-6 December 2013 Cuticle scale measurement of animal fibers by SEM and AFM Notayi M, Engelbrechts JAA, Lee ME, Goosen WE, Hunter L and Botha AF Abstract...

  5. The Effect of Creatin and Carnitine Supplementation on 5 kmClassic and 10 km Free Styles Race Performance of Cross Country Skiers

    OpenAIRE

    Ebru ÇETİN

    2004-01-01

    This İnvestigation examined the effect of creatin and carnitine supplementation on 5 km classic and 10 km free styles race performance of competitive cross country skiers.Eighteen highly trained (12 male and 6 female) cross country skiers aged 13-16 years seperated into 3 equal groups. All groups participated in the 5 km classic and 10 km free races styles in Erciyes at 2200m altitude ski center before the carnitine and creatine loading. After the race subjects were seperated into carnitine, ...

  6. Crystallization of Probucol in Nanoparticles Revealed by AFM Analysis in Aqueous Solution.

    Science.gov (United States)

    Egami, Kiichi; Higashi, Kenjirou; Yamamoto, Keiji; Moribe, Kunikazu

    2015-08-03

    The crystallization behavior of a pharmaceutical drug in nanoparticles was directly evaluated by atomic force microscopy (AFM) force curve measurements in aqueous solution. A ternary spray-dried sample (SPD) was prepared by spray drying the organic solvent containing probucol (PBC), hypromellose (HPMC), and sodium dodecyl sulfate (SDS). The amorphization of PBC in the ternary SPD was confirmed by powder X-ray diffraction (PXRD) and solid-state 13C NMR measurements. A nanosuspension containing quite small particles of 25 nm in size was successfully prepared immediately after dispersion of the ternary SPD into water. Furthermore, solution-state 1H NMR measurements revealed that a portion of HPMC coexisted with PBC as a mixed state in the freshly prepared nanosuspension particles. After storing the nanosuspension at 25 °C, a gradual increase in the size of the nanoparticles was observed, and the particle size changed to 93.9 nm after 7 days. AFM enabled the direct observation of the morphology and agglomeration behavior of the nanoparticles in water. Moreover, AFM force-distance curves were changed from (I) to (IV), depending on the storage period, as follows: (I) complete indentation within an applied force of 1 nN, (II) complete indentation with an applied force of 1-5 nN, (III) partial indentation with an applied force of 5 nN, and (IV) nearly no indentation with an applied force of 5 nN. This stiffness increase of the nanoparticles was attributed to gradual changes in the molecular state of PBC from the amorphous to the crystal state. Solid-state 13C NMR measurements of the freeze-dried samples demonstrated the presence of metastable PBC Form II crystals in the stored nanosuspension, strongly supporting the AFM results.

  7. Molecular dynamics simulation of AFM studies of a single polymer chain

    International Nuclear Information System (INIS)

    Wang Wenhai; Kistler, Kurt A.; Sadeghipour, Keya; Baran, George

    2008-01-01

    Single polymer chain force-extension behavior measured by Atomic Force Microscopy (AFM) was interpreted by molecular dynamics (MD) simulation performed by applying a bead-spring (coarse-graining) model in which the bond potential function between adjacent beads is described by a worm-like chain (WLC) model. Simulation results indicate that caution should be applied when interpreting experimental AFM data, because the data vary depending on the point of AFM tip-polymer chain attachment. This approach offers an effective way for eventual analysis of the mechanical behavior of complex polymer networks

  8. Molecular dynamics simulation of AFM studies of a single polymer chain

    Energy Technology Data Exchange (ETDEWEB)

    Wang Wenhai [Center for Bioengineering and Biomaterials, College of Engineering, Temple University, 1947 N. 12th Street, Philadelphia, PA 19122 (United States); Kistler, Kurt A. [Department of Chemistry, Temple University, 1901 N. 13th Street, Philadelphia, PA 19122 (United States); Sadeghipour, Keya [Center for Bioengineering and Biomaterials, College of Engineering, Temple University, 1947 N. 12th Street, Philadelphia, PA 19122 (United States); Baran, George [Center for Bioengineering and Biomaterials, College of Engineering, Temple University, 1947 N. 12th Street, Philadelphia, PA 19122 (United States)], E-mail: grbaran@temple.edu

    2008-11-24

    Single polymer chain force-extension behavior measured by Atomic Force Microscopy (AFM) was interpreted by molecular dynamics (MD) simulation performed by applying a bead-spring (coarse-graining) model in which the bond potential function between adjacent beads is described by a worm-like chain (WLC) model. Simulation results indicate that caution should be applied when interpreting experimental AFM data, because the data vary depending on the point of AFM tip-polymer chain attachment. This approach offers an effective way for eventual analysis of the mechanical behavior of complex polymer networks.

  9. Validation of AVHRR- and MODIS-derived albedos of snow and ice surfaces by means of helicopter measurements

    NARCIS (Netherlands)

    Greuell, W.; Oerlemans, J.

    2005-01-01

    We describe the validation of surface albedos of snow and glacier ice as derived from Advanced Very High Resolution Radiometer (AVHRR) and MOderate Resolution Imaging Spectrometer (MODIS) satellite data. For this purpose we measured surface albedos from a helicopter over Vatnajökull, Iceland, and

  10. Understanding the extremely low fracture toughness of freestanding gold thin films by in-situ bulge testing in an AFM

    Energy Technology Data Exchange (ETDEWEB)

    Preiß, Eva I., E-mail: eva.preiss@fau.de; Merle, Benoit; Göken, Mathias

    2017-04-13

    The fracture toughness of freestanding gold films with thicknesses between 60 nm and 320 nm was determined by bulge testing to be around 2 MPa m{sup 1/2}. This surprisingly low value confirms the trend also observed for other metals that thin films exhibit only a fraction of the bulk fracture toughness. In order to understand this behavior, the fracture process of freestanding gold films with a crack introduced by focused ion beam (FIB) milling was observed in-situ in an atomic force microscope (AFM). AFM scans of the crack tip region show stable crack growth mainly along grain boundaries. Plastic deformation is localized in a narrow corridor in front of the crack tip. A large plastic zone, as one would typically expect under plane stress, is not observed. Instead, strong local necking is evidenced. We conclude that the spatial confinement of the plastic deformation is the primary reason for the low fracture toughness of metallic thin films.

  11. Modification of AFM Tips for Facilitating Picking-up of Nanoparticles

    International Nuclear Information System (INIS)

    Peng, Wang; Hai-Jun, Yang; Hua-Bin, Wang; Hai, Li; Xin-Yan, Wang; Ying, Wang; Jun-Hong, Lü; Bin, Li; Yi, Zhang; Jun, Hu

    2008-01-01

    The radius of atomic force microscope (AFM) tip is a key factor that influences nonspecific interactions between AFM tip and nanoparticles. Generally, a tip with larger radius contributes to a higher efficiency of picking up nanoparticles. We provide two methods for modifying the AFM tip: one is to wear a tip apex on a solid substrate and the other is to coat a tip with poly (dimethylsiloxane) (PDMS). Both the approaches can enhance the adhesion force between the tip and nanoparticles by increasing tip radius. The experimental results show that a modified tip, compared to an unmodified one, achieves six-fold efficiency improvement in the capture of targeted colloidal gold nanoparticles. (general)

  12. Statistical analysis of AFM topographic images of self-assembled quantum dots

    Energy Technology Data Exchange (ETDEWEB)

    Sevriuk, V. A.; Brunkov, P. N., E-mail: brunkov@mail.ioffe.ru; Shalnev, I. V.; Gutkin, A. A.; Klimko, G. V.; Gronin, S. V.; Sorokin, S. V.; Konnikov, S. G. [Russian Academy of Sciences, Ioffe Physical-Technical Institute (Russian Federation)

    2013-07-15

    To obtain statistical data on quantum-dot sizes, AFM topographic images of the substrate on which the dots under study are grown are analyzed. Due to the nonideality of the substrate containing height differences on the order of the size of nanoparticles at distances of 1-10 {mu}m and the insufficient resolution of closely arranged dots due to the finite curvature radius of the AFM probe, automation of the statistical analysis of their large dot array requires special techniques for processing topographic images to eliminate the loss of a particle fraction during conventional processing. As such a technique, convolution of the initial matrix of the AFM image with a specially selected matrix is used. This makes it possible to determine the position of each nanoparticle and, using the initial matrix, to measure their geometrical parameters. The results of statistical analysis by this method of self-assembled InAs quantum dots formed on the surface of an AlGaAs epitaxial layer are presented. It is shown that their concentration, average size, and half-width of height distribution depend strongly on the In flow and total amount of deposited InAs which are varied within insignificant limits.

  13. A Multifunctional Frontloading Approach for Repeated Recycling of a Pressure-Controlled AFM Micropipette.

    Directory of Open Access Journals (Sweden)

    Phillip Roder

    Full Text Available Fluid force microscopy combines the positional accuracy and force sensitivity of an atomic force microscope (AFM with nanofluidics via a microchanneled cantilever. However, adequate loading and cleaning procedures for such AFM micropipettes are required for various application situations. Here, a new frontloading procedure is described for an AFM micropipette functioning as a force- and pressure-controlled microscale liquid dispenser. This frontloading procedure seems especially attractive when using target substances featuring high costs or low available amounts. Here, the AFM micropipette could be filled from the tip side with liquid from a previously applied droplet with a volume of only a few μL using a short low-pressure pulse. The liquid-loaded AFM micropipettes could be then applied for experiments in air or liquid environments. AFM micropipette frontloading was evaluated with the well-known organic fluorescent dye rhodamine 6G and the AlexaFluor647-labeled antibody goat anti-rat IgG as an example of a larger biological compound. After micropipette usage, specific cleaning procedures were tested. Furthermore, a storage method is described, at which the AFM micropipettes could be stored for a few hours up to several days without drying out or clogging of the microchannel. In summary, the rapid, versatile and cost-efficient frontloading and cleaning procedure for the repeated usage of a single AFM micropipette is beneficial for various application situations from specific surface modifications through to local manipulation of living cells, and provides a simplified and faster handling for already known experiments with fluid force microscopy.

  14. Recent history of large-scale ecosystem disturbances in North America derived from the AVHRR satellite record.

    Science.gov (United States)

    Christopher Potter; Tan Pang-Ning; Vipin Kumar; Chris Kucharik; Steven Klooster; Vanessa Genovese; Warren Cohen; Sean. Healey

    2005-01-01

    Ecosystem structure and function are strongly affected by disturbance events, many of which in North America are associated with seasonal temperature extremes, wildfires, and tropical storms. This study was conducted to evaluate patterns in a 19-year record of global satellite observations of vegetation phenology from the advanced very high resolution radiometer (AVHRR...

  15. The formation of liquid bridge in different operating modes of AFM

    Science.gov (United States)

    Wei, Zheng; Sun, Yan; Ding, WenXuan; Wang, ZaiRan

    2016-09-01

    The liquid bridge is one of the principal factors that cause artifacts in ambient-pressure atomic force microscope (AFM) images. Additionally, it is the main component of the adhesion force in ambient conditions. To understand the AFM imaging mechanism and the sample characteristics, it is essential to study the liquid bridge. This study interprets the physical mechanism involved in liquid bridge formation, which is composed of three different physical processes: the squeezing process, capillary condensation, and liquid film flow. We discuss the contributions of these three mechanisms to the volume and the capillary force of the liquid bridge in different AFM operation modes.

  16. AMSR-E/Aqua surface soil moisture (LPRM) L3 1 day 25 km x 25 km ascending V002 (LPRM_AMSRE_A_SOILM3) at GES DISC

    Data.gov (United States)

    National Aeronautics and Space Administration — AMSR-E/Aqua surface soil moisture (LPRM) L3 1 day 25 km x 25 km ascending V002 is a Level 3 (gridded) data set. Its land surface parameters, surface soil moisture,...

  17. 12-core x 3-mode Dense Space Division Multiplexed Transmission over 40 km Employing Multi-carrier Signals with Parallel MIMO Equalization

    DEFF Research Database (Denmark)

    Mizuno, T.; Kobayashi, T.; Takara, H.

    2014-01-01

    We demonstrate dense SDM transmission of 20-WDM multi-carrier PDM-32QAM signals over a 40-km 12-core x 3-mode fiber with 247.9-b/s/Hz spectral efficiency. Parallel MIMO equalization enables 21-ns DMD compensation with 61 TDE taps per subcarrier....

  18. Noncontact AFM Imaging of Atomic Defects on the Rutile TiO2 (110) Surface

    DEFF Research Database (Denmark)

    Lauritsen, Jeppe Vang

    2015-01-01

    The atomic force microscope (AFM) operated in the noncontact mode (nc-AFM) offers a unique tool for real space, atomic-scale characterisation of point defects and molecules on surfaces, irrespective of the substrate being electrically conducting or non-conducting. The nc-AFM has therefore in rece...

  19. Fabrication of cone-shaped boron doped diamond and gold nanoelectrodes for AFM-SECM

    Energy Technology Data Exchange (ETDEWEB)

    Avdic, A; Lugstein, A; Bertagnolli, E [Solid State Electronics Institute, Vienna University of Technology, Floragasse 7, 1040 Vienna (Austria); Wu, M; Gollas, B [Competence Centre for Electrochemical Surface Technology, Viktor Kaplan Strasse 2, 2700 Wiener Neustadt (Austria); Pobelov, I; Wandlowski, T [Department of Chemistry and Biochemistry, University of Bern, Freiestrasse 3, 3012 Bern (Switzerland); Leonhardt, K; Denuault, G, E-mail: alois.lugstein@tuwien.ac.at [School of Chemistry, University of Southampton, Highfield, Southampton SO17 1BJ (United Kingdom)

    2011-04-08

    We demonstrate a reliable microfabrication process for a combined atomic force microscopy (AFM) and scanning electrochemical microscopy (SECM) measurement tool. Integrated cone-shaped sensors with boron doped diamond (BDD) or gold (Au) electrodes were fabricated from commercially available AFM probes. The sensor formation process is based on mature semiconductor processing techniques, including focused ion beam (FIB) machining, and highly selective reactive ion etching (RIE). The fabrication approach preserves the geometry of the original AFM tips resulting in well reproducible nanoscaled sensors. The feasibility and functionality of the fully featured tips are demonstrated by cyclic voltammetry, showing good agreement between the measured and calculated currents of the cone-shaped AFM-SECM electrodes.

  20. Mechanism of high-resolution STM/AFM imaging with functionalized tips

    Czech Academy of Sciences Publication Activity Database

    Hapala, Prokop; Kichin, G.; Wagner, C.; Tautz, F.S.; Temirov, R.; Jelínek, Pavel

    2014-01-01

    Roč. 90, č. 8 (2014), "085421-1"-"085421-9" ISSN 1098-0121 R&D Projects: GA ČR(CZ) GC14-16963J Grant - others:AVČR(CZ) M100101207 Institutional support: RVO:68378271 Keywords : AFM * STM * high resolution Subject RIV: BM - Solid Matter Physics ; Magnetism Impact factor: 3.736, year: 2014

  1. AFM study of structure influence on butterfly wings coloration

    OpenAIRE

    Dallaeva, Dinara; Tománek, Pavel

    2012-01-01

    This study describes the structural coloration of the butterfly Vanessa Atalanta wings and shows how the atomic force microscopy (AFM) can be applied to the study of wings morphology and wings surface behavior under the temperature. The role of the wings morphology in colors was investigated. Different colors of wings have different topology and can be identified by them. AFM in semi-contact mode was used to study the wings surface. The wing surface area, which is close to the butterfly body,...

  2. Transient Tip-Sample Interactions in High-Speed AFM Imaging of 3D nano structures

    NARCIS (Netherlands)

    Keyvani Janbahan, A.; Sadeghian Marnani, H; Goosen, H.; Keulen, F. van

    2015-01-01

    The maximum amount of repulsive force applied to the surface plays a very important role in damage of tip or sample in Atomic Force Microscopy(AFM). So far, many investigations have focused on peak repulsive forces in tapping mode AFM in steady state conditions. However, it is known that AFM could

  3. Implementing atomic force microscopy (AFM) for studying kinetics of gold nanoparticle's growth

    DEFF Research Database (Denmark)

    Georgiev, P.; Bojinova, A.; Kostova, B.

    2013-01-01

    In a novel experimental approach Atomic Force Microscopy (AFM) was applied as a tool for studying the kinetics of gold nanoparticle growth. The gold nanoparticles were obtained by classical Turkevich citrate synthesis at two different temperatures. From the analysis of AFM images during...... the synthesis process the nanoparticle s' sizes were obtained. To demonstrate the applicability and the reliability of the proposed experimental approach we studied the nanoparticles growth at two different temperatures by spectrophotometric measurements and compared them with the results from AFM experimental...

  4. AFM imaging of functionalized carbon nanotubes on biological membranes

    International Nuclear Information System (INIS)

    Lamprecht, C; Danzberger, J; Rangl, M; Gruber, H J; Hinterdorfer, P; Kienberger, F; Ebner, A; Liashkovich, I; Neves, V; Heister, E; Coley, H M; McFadden, J; Flahaut, E

    2009-01-01

    Multifunctional carbon nanotubes are promising for biomedical applications as their nano-size, together with their physical stability, gives access into the cell and various cellular compartments including the nucleus. However, the direct and label-free detection of carbon nanotube uptake into cells is a challenging task. The atomic force microscope (AFM) is capable of resolving details of cellular surfaces at the nanometer scale and thus allows following of the docking of carbon nanotubes to biological membranes. Here we present topographical AFM images of non-covalently functionalized single walled (SWNT) and double walled carbon nanotubes (DWNT) immobilized on different biological membranes, such as plasma membranes and nuclear envelopes, as well as on a monolayer of avidin molecules. We were able to visualize DWNT on the nuclear membrane while at the same time resolving individual nuclear pore complexes. Furthermore, we succeeded in localizing individual SWNT at the border of incubated cells and in identifying bundles of DWNT on cell surfaces by AFM imaging.

  5. A Sample-Based Forest Monitoring Strategy Using Landsat, AVHRR and MODIS Data to Estimate Gross Forest Cover Loss in Malaysia between 1990 and 2005

    Directory of Open Access Journals (Sweden)

    Peter Potapov

    2013-04-01

    Full Text Available Insular Southeast Asia is a hotspot of humid tropical forest cover loss. A sample-based monitoring approach quantifying forest cover loss from Landsat imagery was implemented to estimate gross forest cover loss for two eras, 1990–2000 and 2000–2005. For each time interval, a probability sample of 18.5 km × 18.5 km blocks was selected, and pairs of Landsat images acquired per sample block were interpreted to quantify forest cover area and gross forest cover loss. Stratified random sampling was implemented for 2000–2005 with MODIS-derived forest cover loss used to define the strata. A probability proportional to x (πpx design was implemented for 1990–2000 with AVHRR-derived forest cover loss used as the x variable to increase the likelihood of including forest loss area in the sample. The estimated annual gross forest cover loss for Malaysia was 0.43 Mha/yr (SE = 0.04 during 1990–2000 and 0.64 Mha/yr (SE = 0.055 during 2000–2005. Our use of the πpx sampling design represents a first practical trial of this design for sampling satellite imagery. Although the design performed adequately in this study, a thorough comparative investigation of the πpx design relative to other sampling strategies is needed before general design recommendations can be put forth.

  6. Development of a UPLC-FLD Method for Detection of Aflatoxin B1 and M1 in Animal Tissue to Study the Effect of Curcumin on Mycotoxin Clearance Rates

    Directory of Open Access Journals (Sweden)

    Xiaoxu Cui

    2017-09-01

    Full Text Available Aflatoxin B1 (AFB1 and its metabolite aflatoxin M1 (AFM1 are well-known carcinogens for humans and animals health. In this study, an ultra-high performance liquid chromatography linked with fluorescence detection (UPLC-FLD method was optimized and validated. In addition, we investigated for the first time, the influence of curcumin on residue depletion of AFB1 and AFM1 in liver, kidney, and muscle tissues of broiler chickens and estimated a necessary clearance time required for AFB1 and AFM1 residues. The results showed that the average recoveries of AFB1 varied in liver, kidney, and muscles between 82.32–85.56, 85.34–88.45, and 84.88–89.73% respectively, while the average recoveries of AFM1 in liver, kidney, and muscles varied between 92.17–95.03, 94.12–97.21, and 95.32–98.51%, respectively. The detection limit of aflatoxin B1 was 0.008 ng/ml, while for aflatoxin M1 was 0.003 ng/ml. The limit of quantification (LOQ for AFB1 and AFM1 was 0.02 and 0.01 ng/ml, respectively. Clearance time for AFB1 and AFM1 residues were analyzed in two experimental groups of broilers. One group fed with dietary AFB1 (5.0 mg/kg feed and other with curcumin+AFB1 diet (curcumin; 300 mg/kg feed, AFB1; 5.0 mg/kg feed. AFB1 and AFM1 residues clearance time was calculated based on LOQ using withdrawal time calculation software (WT1.4. Clearance time analyzed for AFB1 ranged from 11 to 19 days and for AFM1 ranged from 10 to 12 days at 95% confidence level. Interestingly, curcumin supplementation in the diet reduced the clearance time of AFM1 in liver and kidney but not in muscle tissues. Conclusively, the developed method can be appropriately used for the quality control testing of commercial broiler-meat processing companies, food manufacturers, and quality control laboratories.

  7. Near-Field Spectroscopy with Nanoparticles Deposited by AFM

    Science.gov (United States)

    Anderson, Mark S.

    2008-01-01

    An alternative approach to apertureless near-field optical spectroscopy involving an atomic-force microscope (AFM) entails less complexity of equipment than does a prior approach. The alternative approach has been demonstrated to be applicable to apertureless near-field optical spectroscopy of the type using an AFM and surface enhanced Raman scattering (SERS), and is expected to be equally applicable in cases in which infrared or fluorescence spectroscopy is used. Apertureless near-field optical spectroscopy is a means of performing spatially resolved analyses of chemical compositions of surface regions of nanostructured materials. In apertureless near-field spectroscopy, it is common practice to utilize nanostructured probe tips or nanoparticles (usually of gold) having shapes and dimensions chosen to exploit plasmon resonances so as to increase spectroscopic-signal strengths. To implement the particular prior approach to which the present approach is an alternative, it is necessary to integrate a Raman spectrometer with an AFM and to utilize a special SERS-active probe tip. The resulting instrumentation system is complex, and the tasks of designing and constructing the system and using the system to acquire spectro-chemical information from nanometer-scale regions on a surface are correspondingly demanding.

  8. SEM and AFM studies of dip-coated CuO nanofilms.

    Science.gov (United States)

    Dhanasekaran, V; Mahalingam, T; Ganesan, V

    2013-01-01

    Cupric oxide (CuO) semiconducting thin films were prepared at various copper sulfate concentrations by dip coating. The copper sulfate concentration was varied to yield films of thicknesses in the range of 445-685 nm by surface profilometer. X-ray diffraction patterns revealed that the deposited films were polycrystalline in nature with monoclinic structure of (-111) plane. The surface morphology and topography of monoclinic-phase CuO thin films were examined using scanning electron microscopy (SEM) and atomic force microscopy (AFM), respectively. Surface roughness profile was plotted using WSxM software and the estimated surface roughness was about ∼19.4 nm at 30 mM molar concentration. The nanosheets shaped grains were observed by SEM and AFM studies. The stoichiometric compound formation was observed at 30 mM copper sulfate concentration prepared film by EDX. The indirect band gap energy of CuO films was increased from 1.08 to 1.20 eV with the increase of copper sulfate concentrations. Copyright © 2012 Wiley Periodicals, Inc.

  9. SST, Pathfinder Ver 5.0, Day and Night, 4.4 km, Global, Science Quality

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — AVHRR Pathfinder Oceans Project seeks to create a long-term, continuous sea surface temperature data series for use in climate research. The Pathfinder SST data...

  10. Antarctic 1 km Digital Elevation Model (DEM) from Combined ERS-1 Radar and ICESat Laser Satellite Altimetry

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set provides a 1 km resolution Digital Elevation Model (DEM) of Antarctica. The DEM combines measurements from the European Remote Sensing Satellite-1...

  11. High-stress study of bioinspired multifunctional PEDOT:PSS/nanoclay nanocomposites using AFM, SEM and numerical simulation

    Directory of Open Access Journals (Sweden)

    Alfredo J. Diaz

    2017-10-01

    Full Text Available Bioinspired design has been central in the development of hierarchical nanocomposites. Particularly, the nacre-mimetic brick-and-mortar structure has shown excellent mechanical properties, as well as gas-barrier properties and optical transparency. Along with these intrinsic properties, the layered structure has also been utilized in sensing devices. Here we extend the multifunctionality of nacre-mimetics by designing an optically transparent and electron conductive coating based on PEDOT:PSS and nanoclays Laponite RD and Cloisite Na+. We carry out extensive characterization of the nanocomposite using transmittance spectra (transparency, conductive atomic force microscopy (conductivity, contact-resonance force microscopy (mechanical properties, and SEM combined with a variety of stress-strain AFM experiments and AFM numerical simulations (internal structure. We further study the nanoclay’s response to the application of pressure with multifrequency AFM and conductive AFM, whereby increases and decreases in conductivity can occur for the Laponite RD composites. We offer a possible mechanism to explain the changes in conductivity by modeling the coating as a 1-dimensional multibarrier potential for electron transport, and show that conductivity can change when the separation between the barriers changes under the application of pressure, and that the direction of the change depends on the energy of the electrons. We did not observe changes in conductivity under the application of pressure with AFM for the Cloisite Na+ nanocomposite, which has a large platelet size compared with the AFM probe diameter. No pressure-induced changes in conductivity were observed in the clay-free polymer either.

  12. LAI, FAPAR and FCOVER products derived from AVHRR long time series: principles and evaluation

    Science.gov (United States)

    Verger, A.; Baret, F.; Weiss, M.; Lacaze, R.; Makhmara, H.; Pacholczyk, P.; Smets, B.; Kandasamy, S.; Vermote, E.

    2012-04-01

    Continuous and long term global monitoring of the terrestrial biosphere has draught an intense interest in the recent years in the context of climate and global change. Developing methodologies for generating historical data records from data collected with different satellite sensors over the past three decades by taking benefits from the improvements identified in the processing of the new generation sensors is a new central issue in remote sensing community. In this context, the Bio-geophysical Parameters (BioPar) service within Geoland2 project (http://www.geoland2.eu) aims at developing pre-operational infrastructures for providing global land products both in near real time and off-line mode with long time series. In this contribution, we describe the principles of the GEOLAND algorithm for generating long term datasets of three key biophysical variables, leaf area index (LAI), Fraction of Absorbed Photosynthetic Active Radiation (FAPAR) and cover fraction (FCOVER), that play a key role in several processes, including photosynthesis, respiration and transpiration. LAI, FAPAR and FCOVER are produced globally from AVHRR Long Term Data Record (LTDR) for the 1981-2000 period at 0.05° spatial resolution and 10 days temporal sampling frequency. The proposed algorithm aims to ensure robustness of the derived long time series and consistency with the ones developed in the recent years, and particularly with GEOLAND products derived from VEGETATION sensor. The approach is based on the capacity of neural networks to learn a particular biophysical product (GEOLAND) from reflectances from another sensor (AVHRR normalized reflectances in the red and near infrared bands). Outliers due to possible cloud contamination or residual atmospheric correction are iteratively eliminated. Prior information based on the climatology is used to get more robust estimates. A specific gap filing and smoothing procedure was applied to generate continuous and smooth time series of decadal

  13. A method for an accurate in-flight calibration of AVHRR data for vegetation index calculation

    OpenAIRE

    Asmami , Mbarek; Wald , Lucien

    1992-01-01

    International audience; A significant degradation in the Advanced Very High Resolution Radiometer (AVHRR) responsitivity, on the NOAA satellite series, has occurred since the prelaunch calibration and with time since launch. This affects the index vegetation (NDVI), which is an important source of information for monitoring vegetation conditions on regional and global scales. Many studies have been carried out which use the Viewing Earth calibration approach in order to provide accurate calib...

  14. AFM tip characterization by using FFT filtered images of step structures

    Energy Technology Data Exchange (ETDEWEB)

    Yan, Yongda, E-mail: yanyongda@hit.edu.cn [Key Laboratory of Micro-systems and Micro-structures Manufacturing of Ministry of Education, Harbin Institute of Technology, Harbin, Heilongjiang 150001 (China); Center For Precision Engineering, Harbin Institute of Technology, Harbin, Heilongjiang 150001 (China); Xue, Bo [Key Laboratory of Micro-systems and Micro-structures Manufacturing of Ministry of Education, Harbin Institute of Technology, Harbin, Heilongjiang 150001 (China); Center For Precision Engineering, Harbin Institute of Technology, Harbin, Heilongjiang 150001 (China); Hu, Zhenjiang; Zhao, Xuesen [Center For Precision Engineering, Harbin Institute of Technology, Harbin, Heilongjiang 150001 (China)

    2016-01-15

    The measurement resolution of an atomic force microscope (AFM) is largely dependent on the radius of the tip. Meanwhile, when using AFM to study nanoscale surface properties, the value of the tip radius is needed in calculations. As such, estimation of the tip radius is important for analyzing results taken using an AFM. In this study, a geometrical model created by scanning a step structure with an AFM tip was developed. The tip was assumed to have a hemispherical cone shape. Profiles simulated by tips with different scanning radii were calculated by fast Fourier transform (FFT). By analyzing the influence of tip radius variation on the spectra of simulated profiles, it was found that low-frequency harmonics were more susceptible, and that the relationship between the tip radius and the low-frequency harmonic amplitude of the step structure varied monotonically. Based on this regularity, we developed a new method to characterize the radius of the hemispherical tip. The tip radii estimated with this approach were comparable to the results obtained using scanning electron microscope imaging and blind reconstruction methods. - Highlights: • The AFM tips with different radii were simulated to scan a nano-step structure. • The spectra of the simulation scans under different radii were analyzed. • The functions of tip radius and harmonic amplitude were used for evaluating tip. • The proposed method has been validated by SEM imaging and blind reconstruction.

  15. Visualising the Micro World of Chemical/Geochemical Interactions Using Atomic Force Microscopy (AFM)

    Energy Technology Data Exchange (ETDEWEB)

    Graham, G M; Sorbie, K S

    1997-12-31

    Scanning force microscopy, in particular AFM (Atomic Force Microscopy), provides a particular useful and interesting tool for the examination of surface structure at the near-atomic level. AFM is particularly well suited to the study of interactions at the surface in aqueous solutions using real time in-situ measurements. In this paper there is presented AFM images showing in situ crystal growth from supersaturated BaSO{sub 4} solutions onto the surface of barite. Growth structures in the form of spiral crystal growth features, presumably originating from screw dislocations, are illustrated. AFM images of novel scale crystal growth inhibition experiments are presented. Examination of the manner in which generically different species adsorb onto growth structures may help to explain mechanistic differences in the way which different inhibitor species perform against barium sulphate scale formation. Adsorption of polyacrylamide species onto mica surfaces have been viewed. The general utility of AFM to a number of other common surface interactions in oil field chemistry will be discussed. 17 refs., 3 figs.

  16. AFM-based identification of the dynamic properties of globular proteins: simulation study

    International Nuclear Information System (INIS)

    Kim, Deok Ho; Park, Jung Yul; Kim, Moon K.; Hong, Keum Shik

    2008-01-01

    Nowadays a mathematical model-based computational approach is getting more attention as an effective tool for understanding the mechanical behaviors of biological systems. To find the mechanical properties of the proteins required to build such a model, this paper investigates a real-time identification method based on an AFM nanomanipulation system. First, an AFM-based bio-characterization system is introduced. Second, a second-order time-varying linear model representing the interaction between an AFM cantilever and globular proteins in a solvent is presented. Finally, we address a real-time estimation method in which the results of AFM experiments are designed to be inputs of the state estimator proposed here. Our attention is restricted to a theoretical feasibility analysis of the proposed methodology. We simply set the mechanical properties of the particular protein such as mass, stiffness, and damping coefficient in the system model prior to running the simulation. Simulation results show very good agreement with the preset properties. We anticipate that the realization of the AFM-based bio-characterization system will also provide an experimental validation of the proposed identification procedure in the future. This methodology can be used to determine a model of protein motion for the purpose of computer simulation and for a real-time modification of protein deformation

  17. Electrostatic nanopatterning of PMMA by AFM charge writing for directed nano-assembly

    International Nuclear Information System (INIS)

    Ressier, L; Nader, V Le

    2008-01-01

    Electrostatic nanopatterning of poly(methylmethacrylate) (PMMA) thin films by atomic force microscopy (AFM) charge writing was investigated using Kelvin force microscopy (KFM). The lateral size of the electrostatic patterns and the amount of injected charges are closely correlated and can be controlled by the height of the voltage pulses applied to the AFM tip and the tip-sample separation during the writing process. Charge retention measurements show that PMMA has excellent charge storage properties in air under relative humidities from 1% to 60% and withstands immersion in ultra-pure water. This study thus reveals that PMMA is a very promising electret to create efficient electrostatic nanopatterns for directed self-assembly of nanoscale objects, including the broad range of colloidal particles or molecules in aqueous solutions

  18. Rainforest metropolis casts 1,000-km defaunation shadow.

    Science.gov (United States)

    Tregidgo, Daniel J; Barlow, Jos; Pompeu, Paulo S; de Almeida Rocha, Mayana; Parry, Luke

    2017-08-08

    Tropical rainforest regions are urbanizing rapidly, yet the role of emerging metropolises in driving wildlife overharvesting in forests and inland waters is unknown. We present evidence of a large defaunation shadow around a rainforest metropolis. Using interviews with 392 rural fishers, we show that fishing has severely depleted a large-bodied keystone fish species, tambaqui ( Colossoma macropomum ), with an impact extending over 1,000 km from the rainforest city of Manaus (population 2.1 million). There was strong evidence of defaunation within this area, including a 50% reduction in body size and catch rate (catch per unit effort). Our findings link these declines to city-based boats that provide rural fishers with reliable access to fish buyers and ice and likely impact rural fisher livelihoods and flooded forest biodiversity. This empirical evidence that urban markets can defaunate deep into rainforest wilderness has implications for other urbanizing socioecological systems.

  19. Biomechanical Properties of Murine Meniscus Surface via AFM-based Nanoindentation

    Science.gov (United States)

    Li, Qing; Doyran, Basak; Gamer, Laura W.; Lu, X. Lucas; Qin, Ling; Ortiz, Christine; Grodzinsky, Alan J.; Rosen, Vicki; Han, Lin

    2015-01-01

    This study aimed to quantify the biomechanical properties of murine meniscus surface. Atomic force microscopy (AFM)-based nanoindentation was performed on the central region, proximal side of menisci from 6- to 24-week old male C57BL/6 mice using microspherical tips (Rtip ≈ 5 μm) in PBS. A unique, linear correlation between indentation depth, D, and response force, F, was found on menisci from all age groups. This non-Hertzian behavior is likely due to the dominance of tensile resistance by the collagen fibril bundles on meniscus surface that are mostly aligned along the circumferential direction observed on 12-week old menisci. The indentation resistance was calculated as both the effective stiffness, Sind = dF/dD, and the effective modulus, Eind, via the isotropic Hertz model. Values of Sind and Eind were found to depend on indentation rate, suggesting the existence of poro-viscoelasticity. These values do not significantly vary with anatomical sites, lateral versus medial compartments, or mouse age. In addition, Eind of meniscus surface (e.g., 6.1 ± 0.8 MPa for 12 weeks of age, mean ± SEM, n = 13) was found to be significantly higher than those of meniscus surfaces in other species, and of murine articular cartilage surface (1.4 ± 0.1 MPa, n = 6). In summary, these results provided the first direct mechanical knowledge of murine knee meniscus tissues. We expect this understanding to serve as a mechanics-based benchmark for further probing the developmental biology and osteoarthritis symptoms of meniscus in various murine models. PMID:25817332

  20. PODAAC-RSX12-L2B11

    Data.gov (United States)

    National Aeronautics and Space Administration — This dataset contains the RapidScat Level 2B 12.5km Version 1.1 science-quality ocean surface wind vectors. The Level 2B wind vectors are binned on a 12.5 km Wind...

  1. Fracture Mechanics Testing of Titanium 6AL-4V in AF-M315E

    Science.gov (United States)

    Sampson, J. W.; Martinez, J.; McLean, C.

    2016-01-01

    The Green Propellant Infusion Mission (GPIM) will demonstrate the performance of AF-M315E monopropellant on orbit. Flight certification requires a safe-life analysis of the titanium alloy fuel tank to ensure inherent processing flaws will not cause failure during the design life of the tank. Material property inputs for this analysis require testing to determine the stress intensity factor for environment-assisted cracking (KEAC) of Ti 6Al-4V in combination with the AF-M315E monopropellant. Testing of single-edge notched, or SE(B), specimens representing the bulk tank membrane and weld material were performed in accordance with ASTM E1681. Specimens with fatigue pre-cracks were loaded into test fixtures so that the crack tips were exposed to AF-M315E at 50 C for a duration of 1,000 hours. Specimens that did not fail during exposure were opened to inspect the crack surfaces for evidence of crack growth. The threshold stress intensity value, KEAC, is the highest applied stress intensity that produced neither a failure of the specimen during the exposure nor showed evidence of crack growth. The threshold stress intensity factor for environment-assisted cracking of the Ti 6Al-4V forged tank material was found to be at least 22 ksivin and at least 31 ksivin for the weld material when exposed to AF-M315E monopropellant.

  2. An AFM-based pit-measuring method for indirect measurements of cell-surface membrane vesicles

    International Nuclear Information System (INIS)

    Zhang, Xiaojun; Chen, Yuan; Chen, Yong

    2014-01-01

    Highlights: • Air drying induced the transformation of cell-surface membrane vesicles into pits. • An AFM-based pit-measuring method was developed to measure cell-surface vesicles. • Our method detected at least two populations of cell-surface membrane vesicles. - Abstract: Circulating membrane vesicles, which are shed from many cell types, have multiple functions and have been correlated with many diseases. Although circulating membrane vesicles have been extensively characterized, the status of cell-surface membrane vesicles prior to their release is less understood due to the lack of effective measurement methods. Recently, as a powerful, micro- or nano-scale imaging tool, atomic force microscopy (AFM) has been applied in measuring circulating membrane vesicles. However, it seems very difficult for AFM to directly image/identify and measure cell-bound membrane vesicles due to the similarity of surface morphology between membrane vesicles and cell surfaces. Therefore, until now no AFM studies on cell-surface membrane vesicles have been reported. In this study, we found that air drying can induce the transformation of most cell-surface membrane vesicles into pits that are more readily detectable by AFM. Based on this, we developed an AFM-based pit-measuring method and, for the first time, used AFM to indirectly measure cell-surface membrane vesicles on cultured endothelial cells. Using this approach, we observed and quantitatively measured at least two populations of cell-surface membrane vesicles, a nanoscale population (<500 nm in diameter peaking at ∼250 nm) and a microscale population (from 500 nm to ∼2 μm peaking at ∼0.8 μm), whereas confocal microscopy only detected the microscale population. The AFM-based pit-measuring method is potentially useful for studying cell-surface membrane vesicles and for investigating the mechanisms of membrane vesicle formation/release

  3. A global catalogue of Ceres impact craters ≥ 1 km and preliminary analysis

    Science.gov (United States)

    Gou, Sheng; Yue, Zongyu; Di, Kaichang; Liu, Zhaoqin

    2018-03-01

    The orbital data products of Ceres, including global LAMO image mosaic and global HAMO DTM with a resolution of 35 m/pixel and 135 m/pixel respectively, are utilized in this research to create a global catalogue of impact craters with diameter ≥ 1 km, and their morphometric parameters are calculated. Statistics shows: (1) There are 29,219 craters in the catalogue, and the craters have a various morphologies, e.g., polygonal crater, floor fractured crater, complex crater with central peak, etc.; (2) The identifiable smallest crater size is extended to 1 km and the crater numbers have been updated when compared with the crater catalogue (D ≥ 20 km) released by the Dawn Science Team; (3) The d/D ratios for fresh simple craters, obviously degraded simple crater and polygonal simple crater are 0.11 ± 0.04, 0.05 ± 0.04 and 0.14 ± 0.02 respectively. (4) The d/D ratios for non-polygonal complex crater and polygonal complex crater are 0.08 ± 0.04 and 0.09 ± 0.03. The global crater catalogue created in this work can be further applied to many other scientific researches, such as comparing d/D with other bodies, inferring subsurface properties, determining surface age, and estimating average erosion rate.

  4. Experimental demonstration of 56 Gbit/s PAM-4 over 15 km and 84 Gbit/s PAM-4 over 1 km SSMF at 1525 nm using a 25G VCSEL

    DEFF Research Database (Denmark)

    Eiselt, Nicklas; Griesser, Helmut; Wei, Jinlong

    2016-01-01

    Record 28-GBd PAM-4 transmission over 15 km SSMF and 42-GBd PAM-4 over 1 km SSMF using a low-power 25G VCSEL are demonstrated at 1525 nm without optical dispersion compensation and only simple transceiver DSPs....

  5. 10 km running performance predicted by a multiple linear regression model with allometrically adjusted variables.

    Science.gov (United States)

    Abad, Cesar C C; Barros, Ronaldo V; Bertuzzi, Romulo; Gagliardi, João F L; Lima-Silva, Adriano E; Lambert, Mike I; Pires, Flavio O

    2016-06-01

    The aim of this study was to verify the power of VO 2max , peak treadmill running velocity (PTV), and running economy (RE), unadjusted or allometrically adjusted, in predicting 10 km running performance. Eighteen male endurance runners performed: 1) an incremental test to exhaustion to determine VO 2max and PTV; 2) a constant submaximal run at 12 km·h -1 on an outdoor track for RE determination; and 3) a 10 km running race. Unadjusted (VO 2max , PTV and RE) and adjusted variables (VO 2max 0.72 , PTV 0.72 and RE 0.60 ) were investigated through independent multiple regression models to predict 10 km running race time. There were no significant correlations between 10 km running time and either the adjusted or unadjusted VO 2max . Significant correlations (p 0.84 and power > 0.88. The allometrically adjusted predictive model was composed of PTV 0.72 and RE 0.60 and explained 83% of the variance in 10 km running time with a standard error of the estimate (SEE) of 1.5 min. The unadjusted model composed of a single PVT accounted for 72% of the variance in 10 km running time (SEE of 1.9 min). Both regression models provided powerful estimates of 10 km running time; however, the unadjusted PTV may provide an uncomplicated estimation.

  6. AFM plough YBCO micro bridges: substrate effects

    CSIR Research Space (South Africa)

    Elkaseh, A

    2009-04-01

    Full Text Available AFM nanolithography was used as a novel cutting technique to define micro-size YBCO superconducting constrictions. Researchers studied the substrate effects on MgO and STO substrates and showed that the observed Shapiro steps from the bridges on STO...

  7. On Improving 4-km Mesoscale Model Simulations

    Science.gov (United States)

    Deng, Aijun; Stauffer, David R.

    2006-03-01

    A previous study showed that use of analysis-nudging four-dimensional data assimilation (FDDA) and improved physics in the fifth-generation Pennsylvania State University National Center for Atmospheric Research Mesoscale Model (MM5) produced the best overall performance on a 12-km-domain simulation, based on the 18 19 September 1983 Cross-Appalachian Tracer Experiment (CAPTEX) case. However, reducing the simulated grid length to 4 km had detrimental effects. The primary cause was likely the explicit representation of convection accompanying a cold-frontal system. Because no convective parameterization scheme (CPS) was used, the convective updrafts were forced on coarser-than-realistic scales, and the rainfall and the atmospheric response to the convection were too strong. The evaporative cooling and downdrafts were too vigorous, causing widespread disruption of the low-level winds and spurious advection of the simulated tracer. In this study, a series of experiments was designed to address this general problem involving 4-km model precipitation and gridpoint storms and associated model sensitivities to the use of FDDA, planetary boundary layer (PBL) turbulence physics, grid-explicit microphysics, a CPS, and enhanced horizontal diffusion. Some of the conclusions include the following: 1) Enhanced parameterized vertical mixing in the turbulent kinetic energy (TKE) turbulence scheme has shown marked improvements in the simulated fields. 2) Use of a CPS on the 4-km grid improved the precipitation and low-level wind results. 3) Use of the Hong and Pan Medium-Range Forecast PBL scheme showed larger model errors within the PBL and a clear tendency to predict much deeper PBL heights than the TKE scheme. 4) Combining observation-nudging FDDA with a CPS produced the best overall simulations. 5) Finer horizontal resolution does not always produce better simulations, especially in convectively unstable environments, and a new CPS suitable for 4-km resolution is needed. 6

  8. Application of Contact Mode AFM to Manufacturing Processes

    Science.gov (United States)

    Giordano, Michael A.; Schmid, Steven R.

    A review of the application of contact mode atomic force microscopy (AFM) to manufacturing processes is presented. A brief introduction to common experimental techniques including hardness, scratch, and wear testing is presented, with a discussion of challenges in the extension of manufacturing scale investigations to the AFM. Differences between the macro- and nanoscales tests are discussed, including indentation size effects and their importance in the simulation of processes such as grinding. The basics of lubrication theory are presented and friction force microscopy is introduced as a method of investigating metal forming lubrication on the nano- and microscales that directly simulates tooling/workpiece asperity interactions. These concepts are followed by a discussion of their application to macroscale industrial manufacturing processes and direct correlations are made.

  9. Association between immunoglobulin GM and KM genotypes and placental malaria in HIV-1 negative and positive women in western Kenya.

    Directory of Open Access Journals (Sweden)

    Nnaemeka C Iriemenam

    Full Text Available Immunoglobulin (Ig GM and KM allotypes, genetic markers of γ and κ chains, are associated with humoral immune responsiveness. Previous studies have shown the relationships between GM6-carrying haplotypes and susceptibility to malaria infection in children and adults; however, the role of the genetic markers in placental malaria (PM infection and PM with HIV co-infection during pregnancy has not been investigated. We examined the relationship between the gene polymorphisms of Ig GM6 and KM allotypes and the risk of PM infection in pregnant women with known HIV status. DNA samples from 728 pregnant women were genotyped for GM6 and KM alleles using polymerase chain reaction-restriction fragment length polymorphism method. Individual GM6 and KM genotypes and the combined GM6 and KM genotypes were assessed in relation to PM in HIV-1 negative and positive women, respectively. There was no significant effect of individual GM6 and KM genotypes on the risk of PM infection in HIV-1 negative and positive women. However, the combination of homozygosity for GM6(+ and KM3 was associated with decreased risk of PM (adjusted OR, 0.25; 95% CI, 0.08-0.8; P = 0.019 in HIV-1 negative women while in HIV-1 positive women the combination of GM6(+/- with either KM1-3 or KM1 was associated with increased risk of PM infection (adjusted OR, 2.10; 95% CI, 1.18-3.73; P = 0.011. Hardy-Weinberg Equilibrium (HWE tests further showed an overall significant positive F(is (indication of deficit in heterozygotes for GM6 while there was no deviation for KM genotype frequency from HWE in the same population. These findings suggest that the combination of homozygous GM6(+ and KM3 may protect against PM in HIV-1 negative women while the HIV-1 positive women with heterozygous GM6(+/- combined with KM1-3 or KM1 may be more susceptible to PM infection. The deficit in heterozygotes for GM6 further suggests that GM6 could be under selection likely by malaria infection.

  10. A survey of aflatoxin M1 in cow milk in Southern Iran

    Directory of Open Access Journals (Sweden)

    Majid Hashemi

    2016-10-01

    Full Text Available The competitive enzyme-linked immunosorbent assay technique was used to evaluate aflatoxin M1 (AFM1 levels in 168 samples of raw milk (135 samples and 33 samples from bulk tanks of farms and milk collection centers, respectively and 12 samples of pasteurized milk in Fars province, Southern Iran. AFM1 was found in 55.56% of the samples with a mean concentration of 21.31 ng/L. The concentration of AFM1 in raw milk samples from farms was significantly (p < 0.05 lower than that in samples from collection centers and pasteurized milk. The concentration of AFM1 was not influenced by season, location, or type of farm. The concentrations of AFM1 in all samples were lower than the Iranian national standard limit (100 ng/L, but in 30% of raw cow milk samples they were higher than the maximum tolerance limit accepted by the European Union (50 ng/L; therefore, more effort is needed to control AFM1 levels in milk produced in Southern Iran.

  11. Combining adhesive contact mechanics with a viscoelastic material model to probe local material properties by AFM.

    Science.gov (United States)

    Ganser, Christian; Czibula, Caterina; Tscharnuter, Daniel; Schöberl, Thomas; Teichert, Christian; Hirn, Ulrich

    2017-12-20

    Viscoelastic properties are often measured using probe based techniques such as nanoindentation (NI) and atomic force microscopy (AFM). Rarely, however, are these methods verified. In this article, we present a method that combines contact mechanics with a viscoelastic model (VEM) composed of springs and dashpots. We further show how to use this model to determine viscoelastic properties from creep curves recorded by a probe based technique. We focus on using the standard linear solid model and the generalized Maxwell model of order 2. The method operates in the range of 0.01 Hz to 1 Hz. Our approach is suitable for rough surfaces by providing a defined contact area using plastic pre-deformation of the material. The very same procedure is used to evaluate AFM based measurements as well as NI measurements performed on polymer samples made from poly(methyl methacrylate) and polycarbonate. The results of these measurements are then compared to those obtained by tensile creep tests also performed on the same samples. It is found that the tensile test results differ considerably from the results obtained by AFM and NI methods. The similarity between the AFM results and NI results suggests that the proposed method is capable of yielding results comparable to NI but with the advantage of the imaging possibilities of AFM. Furthermore, all three methods allowed a clear distinction between PC and PMMA by means of their respective viscoelastic properties.

  12. AFM Study of Structure Influence on Butterfly Wings Coloration

    Directory of Open Access Journals (Sweden)

    Dinara Sultanovna Dallaeva

    2012-01-01

    Full Text Available This study describes the structural coloration of the butterfly Vanessa Atalanta wings and shows how the atomic force microscopy (AFM can be applied to the study of wings morphology and wings surface behavior under the temperature. The role of the wings morphology in colors was investigated. Different colors of wings have different topology and can be identified by them. AFM in semi-contact mode was used to study the wings surface. The wing surface area, which is close to the butterfly body, has shiny brown color and the peak of surface roughness is about 600 nm. The changing of morphology at different temperatures is shown.

  13. Systematic UHV-AFM experiments on Na nano-particles and nano-structures in NaCl

    OpenAIRE

    Sugonyako, A.V.; Turkin, A.A.; Gaynutdinov, R.; Vainshtein, D.I.; Hartog, H.W. den; Bukharaev, A.A.

    2005-01-01

    Results of systematic AFM (atomic force microscopy) experiments on heavily and moderatly irradiated NaCl samples are presented. The sodium nanoparticles and structures of nanoparticles are poduced in sodium chloride during irradiation. The AFM images of the nanoparticles have been obtained in ultra high vacuum (UHV) in the non-contact mode with an Omicron UHV AFM/STM system. The sizes and arrangements of the observed particles depend on the irradiation conditions. The melting behaviour of the...

  14. AVHRR Polar Pathfinder Twice-Daily 5 km EASE-Grid Composites

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set is no longer available due to errors in the data. See the Error Sources section of the data set documentation for details. If you have further...

  15. High-field magnetoconductance in La-Sr manganites of FM and AFM ground states

    Science.gov (United States)

    Jirák, Zdeněk; Kaman, Ondřej; Knížek, Karel; Levinský, Petr; Míšek, Martin; Veverka, Pavel; Hejtmánek, Jiří

    2018-06-01

    Large-grain La1-xSrxMnO3 ceramic samples of compositions x = 0.45 and 0.55, representing the ferromagnetic (FM) and A-type antiferromagnetic (AFM) ground states, were produced via classical sintering at 1500 °C of cold-pressed sol-gel prepared single-phase nanoparticles. Using the same precursors, nanogranular forms of both manganite ceramics were prepared by fast spark plasma sintering at low temperature of 900 °C, which limits the growth of crystal grains. The magnetotransport of both the bulk and nanogranular forms was investigated in a broad range of magnetic fields up to 130 kOe and analyzed on the basis of detailed magnetic measurements. Both the large-grain and nanogranular systems with x = 0.45, possessing a pure FM state with similar Curie tempereature TC ≈ 345 K), show nearly the same conductivity enhancement in external fields when expressed relatively to the zero-field values. This positive magnetoconductance (MC) can be separated into two terms: (i) the hysteretic low-field MC that reflects the field-induced orientation of magnetic moments of individual grains, and (ii) the high-field MC that depends linearly on external field. In the case of large-grain ceramics with x = 0.55, a partially ordered FM state formed below TC = 264 K is replaced by pure A-type AFM ground state below 204 K. This A-type AFM state is characterized by positive magnetoconductance that is essentially of quadratic dependence on external field in the investigated range up to 130 kOe. On contrary, the nanogranular product with x = 0.55 exhibits a mixed FM/AFM state at low temperatures, and, as a consequence, its magnetotransport combines the features of FM and A-type AFM systems, in which the quadratic term is much enhanced and clearly dominates at high fields. For interpretation of observed behaviors, the theory of grain-boundary tunneling is revisited.

  16. Charge storage in mesoscopic graphitic islands fabricated using AFM bias lithography

    Energy Technology Data Exchange (ETDEWEB)

    Kurra, Narendra; Basavaraja, S; Kulkarni, G U [Chemistry and Physics of Materials Unit and DST Unit on Nanoscience, Jawaharlal Nehru Centre for Advanced Scientific Research, Jakkur PO, Bangalore 560 064 (India); Prakash, Gyan; Fisher, Timothy S; Reifenberger, Ronald G, E-mail: kulkarni@jncasr.ac.in, E-mail: reifenbr@purdue.edu [Birck Nanotechnology Center, Purdue University, West Lafayette, IN 47907 (United States)

    2011-06-17

    Electrochemical oxidation and etching of highly oriented pyrolytic graphite (HOPG) has been achieved using biased atomic force microscopy (AFM) lithography, allowing patterns of varying complexity to be written into the top layers of HOPG. The graphitic oxidation process and the trench geometry after writing were monitored using intermittent contact mode AFM. Electrostatic force microscopy reveals that the isolated mesoscopic islands formed during the AFM lithography process become positively charged, suggesting that they are laterally isolated from the surrounding HOPG substrate. The electrical transport studies of these laterally isolated finite-layer graphitic islands enable detailed characterization of electrical conduction along the c-direction and reveal an unexpected stability of the charged state. Utilizing conducting-atomic force microscopy, the measured I(V) characteristics revealed significant non-linearities. Micro-Raman studies confirm the presence of oxy functional groups formed during the lithography process.

  17. Finite element modeling of trolling-mode AFM.

    Science.gov (United States)

    Sajjadi, Mohammadreza; Pishkenari, Hossein Nejat; Vossoughi, Gholamreza

    2018-06-01

    Trolling mode atomic force microscopy (TR-AFM) has overcome many imaging problems in liquid environments by considerably reducing the liquid-resonator interaction forces. The finite element model of the TR-AFM resonator considering the effects of fluid and nanoneedle flexibility is presented in this research, for the first time. The model is verified by ABAQUS software. The effect of installation angle of the microbeam relative to the horizon and the effect of fluid on the system behavior are investigated. Using the finite element model, frequency response curve of the system is obtained and validated around the frequency of the operating mode by the available experimental results, in air and liquid. The changes in the natural frequencies in the presence of liquid are studied. The effects of tip-sample interaction on the excitation of higher order modes of the system are also investigated in air and liquid environments. Copyright © 2018 Elsevier B.V. All rights reserved.

  18. 12 Mode, MIMO-Free OAM Transmission

    DEFF Research Database (Denmark)

    Ingerslev, Kasper; Gregg, Patrick; Galili, Michael

    2017-01-01

    Simultaneous MIMO-free transmission of a record number (12) of orbital angular momentum modes over 1.2 km is demonstrated. WDM compatibility of the system is shown by using 60 WDM channels with 25 GHz spacing and 10 GBaud QPSK.......Simultaneous MIMO-free transmission of a record number (12) of orbital angular momentum modes over 1.2 km is demonstrated. WDM compatibility of the system is shown by using 60 WDM channels with 25 GHz spacing and 10 GBaud QPSK....

  19. Moss and lichen cover mapping at local and regional scales in the boreal forest ecosystem of central Canada

    Science.gov (United States)

    Rapalee, G.; Steyaert, L.T.; Hall, F.G.

    2001-01-01

    Mosses and lichens are important components of boreal landscapes [Vitt et al., 1994; Bubier et al., 1997]. They affect plant productivity and belowground carbon sequestration and alter the surface runoff and energy balance. We report the use of multiresolution satellite data to map moss and lichens over the BOREAS region at a 10 m, 30 m, and 1 km scales. Our moss and lichen classification at the 10 m scale is based on ground observations of associations among soil drainage classes, overstory composition, and cover type among four broad classes of ground cover (feather, sphagnum, and brown mosses and lichens). For our 30 m map, we used field observations of ground cover-overstory associations to map mosses and lichens in the BOREAS southern study area (SSA). To scale up to a 1 km (AVHRR) moss map of the BOREAS region, we used the TM SSA mosaics plus regional field data to identify AVHRR overstory-ground cover associations. We found that: 1) ground cover, overstory composition and density are highly correlated, permitting inference of moss and lichen cover from satellite-based land cover classifications; 2) our 1 km moss map reveals that mosses dominate the boreal landscape of central Canada, thereby a significant factor for water, energy, and carbon modeling; 3) TM and AVHRR moss cover maps are comparable; 4) satellite data resolution is important; particularly in detecting the smaller wetland features, lakes, and upland jack pine sites; and 5) distinct regional patterns of moss and lichen cover correspond to latitudinal and elevational gradients. Copyright 2001 by the American Geophysical Union.

  20. Interaction between the SNR Sagittarius A East and the 50-km s-1 Molecular Cloud

    International Nuclear Information System (INIS)

    Tsuboi, Masato; Okumura, Sachiko K; Miyazaki, Atsushi

    2006-01-01

    We performed high-resolution observations of the Galactic Center 50-km s -1 molecular cloud in the CS J = 1 - 0 line using the Nobeyama Millimeter Array. The 50-km s -1 molecular cloud corresponds to a break in the Sagittarius (Sgr) A east shell. A very broad and negative velocity wing feature is detected at an apparent contact spot between the molecular cloud and the Sgr A east shell. The velocity width of the wing feature is over 50-km s -1 . The width is three times wider than those of typical Galactic Center clouds. This strongly suggests that the shell is interacting physically with the molecular cloud. The asymmetric velocity profile of the wing feature indicates that the Sgr A east shell expands and crashes into the far side of the molecular cloud. About 50 clumps are identified in the cloud using CLUMPFIND. The velocity width-size relation and the mass spectrum of clumps in the cloud are similar to those in Central Molecular Zone (CMZ)

  1. Electrospray deposition from fountain pen AFM probes

    NARCIS (Netherlands)

    Geerlings, J.; Sarajlic, Edin; Berenschot, Johan W.; Abelmann, Leon; Tas, Niels Roelof

    2012-01-01

    In this paper we present for the first time electrospraying from fountain pen probes. By using electrospray contactless deposition in an AFM setup becomes possible. Experiments on a dedicated setup were carried out as first step towards this goal. Spraying from 8 and 2 µm apertures was observed. For

  2. New binding site on common molecular scaffold provides HERG channel specificity of scorpion toxin BeKm-1

    DEFF Research Database (Denmark)

    Korolkova, Yuliya V; Bocharov, Eduard V; Angelo, Kamilla

    2002-01-01

    The scorpion toxin BeKm-1 is unique among a variety of known short scorpion toxins affecting potassium channels in its selective action on ether-a-go-go-related gene (ERG)-type channels. BeKm-1 shares the common molecular scaffold with other short scorpion toxins. The toxin spatial structure...... resolved by NMR consists of a short alpha-helix and a triple-stranded antiparallel beta-sheet. By toxin mutagenesis study we identified the residues that are important for the binding of BeKm-1 to the human ERG K+ (HERG) channel. The most critical residues (Tyr-11, Lys-18, Arg-20, Lys-23) are located...

  3. Seasonal variation of sea surface temperature in the Bay of Bengal during 1992 as derived from NOAA-AVHRR SST data

    Digital Repository Service at National Institute of Oceanography (India)

    Murty, V.S.N.; Subrahmanyam, B.; Rao, L.V.G.; Reddy, G.V.

    . The spatial variation of Standard Deviation of SST bias was particularly high (less than 0.7) in the western Bay when compared to other parts of the Bay of Bengal. The monthly maps of AVHRR SST clearly depicted the seasonal cycle of SST showing the well known...

  4. Direct visualization of glutamate transporter elevator mechanism by high-speed AFM.

    Science.gov (United States)

    Ruan, Yi; Miyagi, Atsushi; Wang, Xiaoyu; Chami, Mohamed; Boudker, Olga; Scheuring, Simon

    2017-02-14

    Glutamate transporters are essential for recovery of the neurotransmitter glutamate from the synaptic cleft. Crystal structures in the outward- and inward-facing conformations of a glutamate transporter homolog from archaebacterium Pyrococcus horikoshii , sodium/aspartate symporter Glt Ph , suggested the molecular basis of the transporter cycle. However, dynamic studies of the transport mechanism have been sparse and indirect. Here we present high-speed atomic force microscopy (HS-AFM) observations of membrane-reconstituted Glt Ph at work. HS-AFM movies provide unprecedented real-space and real-time visualization of the transport dynamics. Our results show transport mediated by large amplitude 1.85-nm "elevator" movements of the transport domains consistent with previous crystallographic and spectroscopic studies. Elevator dynamics occur in the absence and presence of sodium ions and aspartate, but stall in sodium alone, providing a direct visualization of the ion and substrate symport mechanism. We show unambiguously that individual protomers within the trimeric transporter function fully independently.

  5. Fast and controlled fabrication of porous graphene oxide: application of AFM tapping for mechano-chemistry

    Science.gov (United States)

    Chu, Liangyong; Korobko, Alexander V.; Bus, Marcel; Boshuizen, Bart; Sudhölter, Ernst J. R.; Besseling, Nicolaas A. M.

    2018-05-01

    This paper describes a novel method to fabricate porous graphene oxide (PGO) from GO by exposure to oxygen plasma. Compared to other methods to fabricate PGO described so far, e.g. the thermal and steam etching methods, oxygen plasma etching method is much faster. We studied the development of the porosity with exposure time using atomic force microscopy (AFM). It was found that the development of PGO upon oxygen-plasma exposure can be controlled by tapping mode AFM scanning using a Si tip. AFM tapping stalls the growth of pores upon further plasma exposure at a level that coincides with the fraction of sp2 carbons in the GO starting material. We suggest that AFM tapping procedure changes the bond structure of the intermediate PGO structure, and these stabilized PGO structures cannot be further etched by oxygen plasma. This constitutes the first report of tapping AFM as a tool for local mechano-chemistry.

  6. AFM of metallic nano-particles and nano-structures in heavily irradiated NaCl

    NARCIS (Netherlands)

    Gaynutdinov, R; Vainshtein, DI; Hak, SJ; Tolstikhina, A; Den Hartog, HW

    2003-01-01

    AFM investigations are reported for heavily, electron irradiated NaCl crystals in ultra high vacuum (UHV) in the non-contact mode-with an UHV AFM/STM Omicron system. To avoid chemical reactions between the radiolytic Na and oxygen and water, the irradiated samples were cleaved and prepared for the

  7. Superparamagnetism in AFM Cr2O3 nanoparticles

    International Nuclear Information System (INIS)

    Tobia, D.; Winkler, E.L.; Zysler, R.D.; Granada, M.; Troiani, H.E.

    2010-01-01

    In this work we report the size effects on the magnetic properties of AFM Cr 2 O 3 nanoparticles. From transmission electron microscopy we determined that the system presents high crystallinity and narrow lognormal size distribution centred at = 7.8 nm with σ = 0.3. The magnetic properties of the nanoparticles were studied by magnetization and electron paramagnetic resonance (EPR) experiments. By EPR spectroscopy we established that the AFM order temperature, T N , shifted to ∼270 K when the size is reduced (T N (Bulk) ∼ 308 K). From the zero-field-cooling and the field-cooling magnetization curves we determined the blocking temperature T B = 28 K. Below T B the system presents exchange bias effect. We discuss the results by using recent models in terms of the internal magnetic structures of the nanoparticles.

  8. Modulation of Intestinal Epithelial Permeability in Differentiated Caco-2 Cells Exposed to Aflatoxin M1 and Ochratoxin A Individually or Collectively

    Directory of Open Access Journals (Sweden)

    Yanan Gao

    2017-12-01

    Full Text Available Aflatoxin M1 (AFM1 and ochratoxin A (OTA are mycotoxins commonly found in milk; however, their effects on intestinal epithelial cells have not been reported. In the present study, we show that AFM1 (0.12 and 12 μM and OTA (0.2 and 20 μM individually or collectively increased the paracellular flux of lucifer yellow and fluorescein isothiocyanate (FITC-dextrans (4 and 40 kDa and decreased transepithelial electrical resistance values in differentiated Caco-2 cells after 48 h of exposure, indicating increased epithelial permeability. Immunoblotting and immunofluorescent analysis revealed that AFM1, OTA, and their combination decreased the expression levels of tight junction (TJ proteins and disrupted their structures, namely, claudin-3, claudin-4, occludin, and zonula occludens-1 (ZO-1, and p44/42 mitogen-activated protein kinase (MAPK partially involved in the mycotoxins-induced disruption of intestinal barrier. The effects of a combination of AFM1 and OTA on intestinal barrier function were more significant (p < 0.05 than those of AFM1 and OTA alone, yielding additive or synergistic effects. The additive or synergistic effects of AFM1 and OTA on intestinal barrier function might affect human health, especially in children, and toxin risks should be considered.

  9. Comparison of different aminofunctionalization strategies for attachment of single antibodies to AFM cantilevers

    Energy Technology Data Exchange (ETDEWEB)

    Ebner, Andreas [Institute of Biophysics, University of Linz, 4040 Linz (Austria)], E-mail: andreas.ebner@jku.at; Hinterdorfer, Peter; Gruber, Hermann J. [Institute of Biophysics, University of Linz, 4040 Linz (Austria)

    2007-10-15

    Atomic force microscopy (AFM) has developed into a key technique for elucidation of biological systems on the single molecular level. In particular, molecular recognition force microscopy has proven to be a powerful tool for the investigation of biological interactions under near physiological conditions. For this purpose, ligands are tethered to AFM tips and the interaction forces with cognate receptors on the sample surface are measured with pico-Newton accuracy. In the first step of tip functionalization, amino groups are typically introduced on the initially inert AFM tip. Several methods have been developed to reproducibly adjust the desired low density of amino groups on the tip surface, i.e. esterification with ethanolamine, gas-phase silanization with aminopropyl-triethoxysilane (APTES), or treatment with aminophenyl-trimethoxysilane (APhS) in toluene solution. In the present study, the usefulness of these methods for attachments of antibodies to AFM tips was characterized by a standardized test system, in which biotinylated IgG was bound to the tip and a dense monolayer of avidin on mica served as test sample. All three methods of aminofunctionalization were found fully satisfactory for attachment of single antibodies to AFM tips, only in a parallel macroscopic assay on silicon nitride chips a minor difference was found in that APTES appeared to yield a slightly lower surface density of amino groups.

  10. From Paris to Beijing, a 12,000-km cycle tour to see the Olympic Games !

    CERN Multimedia

    2008-01-01

    Two members of CERN’s cycling club have taken up an incredible challenge - that of travelling to the Chinese capital for the inauguration of the Olympic Games this summer by pedal power alone! Peter Dreesen (on the left) and Raymond Cambarrat training in 2007, with the CERN Velo Club. At the Moldova-Ukraine border, on 18 April.Peter Dreesen, an engineer in CERN’s AB-PO Group, and Raymond Cambarrat, a safety officer in TS-AS3, set off "on their own two wheels" from the esplanade of the Trocadéro in Paris, on 16 March. Although approaching retirement, both these members of CERN’s Velo Club are well-trained athletes and have the ambition of completing the 12,000-km journey on their bikes from start to finish, crossing twelve countries on their way and arriving in Beijing five days before the start of the Games. It would all seem a rather hair-brained scheme if it were not for the meticulo...

  11. Integração de imagens NOAA/AVHRR: rede de cooperação para monitoramento nacional da safra de soja Integration of NOAA/AVHRR images: cooperation network towards national soybean crop monitoring

    Directory of Open Access Journals (Sweden)

    Anibal Gusso

    2013-04-01

    Full Text Available Uma avaliação inicial das condições do desenvolvimento da safra nacional, enquanto as plantas ainda estão nos campos, é altamente necessária para o cálculo correto das projeções na tomada de decisão e políticas relacionadas com o planejamento governamental e segurança alimentar. O objetivo deste trabalho foi avaliar a adequação dos dados NOAA/AVHRR (National Oceanic and Atmospheric Administration / Advanced Very High Resolution Radiometer em detectar mudanças nas condições da vegetação, devidas à ocorrência de estresse hídrico, na soja, por meio de uma combinação do índice NDVI (Normalized Difference Vegetation Index e da LST (Land Surface Temperature. Os dados LST e NDVI foram combinados e comparados pixel a pixel, sobre uma área de cultivo de soja, no Rio Grande do Sul. A relação teórica inversa prevista na combinação de LST e NDVI foi detectada. Foi observado que ocorre um aumento médio na LST em uma safra de ciclo normal (de 301,02 K para 308,36 K, quando comparada a uma safra sob condição de estresse hídrico, no desenvolvimento da cultura. Uma redução média do NDVI foi observada no ciclo normal (de 0,65 para 0,53, comparada com uma safra sob efeitos ocasionados pela estiagem no desenvolvimento da cultura. Foi observado maior correlação da produtividade municipal com LST (R2=0,78 do que com o NDVI (R2 = 0,59. Os resultados obtidos indicam que a integração de imagens do sensor AVHRR, proveniente de diferentes instituições, proporciona a adequada combinação espacial e temporal dos dados LST e NDVI, a fim de detectar a ocorrência de estresse hídrico, bem como sua intensidade, caracterizando as condições do ciclo de desenvolvimento da soja.An early assessment of national crop development conditions while the plants are still in the fields is highly needed to calculate correctly projections for decision-making and policies related to government planning and food security. The aim of this study

  12. Immobilizing live Escherichia coli for AFM studies of surface dynamics

    International Nuclear Information System (INIS)

    Lonergan, N.E.; Britt, L.D.; Sullivan, C.J.

    2014-01-01

    Atomic force microscopy (AFM) is a probe-based technique that permits high resolution imaging of live bacterial cells. However, stably immobilizing cells to withstand the probe-based lateral forces remains an obstacle in AFM mediated studies, especially those of live, rod shaped bacteria in nutrient media. Consequently, AFM has been under-utilized in the research of bacterial surface dynamics. The aim of the current study was to immobilize a less adherent Escherichia coli strain in a method that both facilitates AFM imaging in nutrient broth and preserves overall cell viability. Immobilization reagents and buffers were systematically evaluated and the cell membrane integrity was monitored in all sample preparations. As expected, the biocompatible gelatin coated surfaces facilitated stable cell attachment in lower ionic strength buffers, yet poorly immobilized cells in higher ionic strength buffers. In comparison, poly-L-lysine surfaces bound cells in both low and high ionic strength buffers. The benefit of the poly-L-lysine binding capacity was offset by the compromised membrane integrity exhibited by cells on poly-L-lysine surfaces. However, the addition of divalent cations and glucose to the immobilization buffer was found to mitigate this unfavorable effect. Ultimately, immobilization of E. coli cells on poly-L-lysine surfaces in a lower ionic strength buffer supplemented with Mg 2+ and Ca 2+ was determined to provide optimal cell attachment without compromising the overall cell viability. Cells immobilized in this method were stably imaged in media through multiple division cycles. Furthermore, permeability assays indicated that E. coli cells recover from the hypoosmotic stress caused by immobilization in low ionic strength buffers. Taken together, this data suggests that stable immobilization of viable cells on poly-L-lysine surfaces can be accomplished in lower ionic strength buffers that are supplemented with divalent cations for membrane stabilization while

  13. Nonlinear Phenomena in the Single-Mode Dynamics in an AFM Cantilever Beam

    KAUST Repository

    Ruzziconi, Laura

    2016-12-05

    This study deals with the nonlinear dynamics arising in an atomic force microscope cantilever beam. After analyzing the static behavior, a single degree of freedom Galerkin reduced order model is introduced, which describes the overall scenario of the structure response in a neighborhood of the primary resonance. Extensive numerical simulations are performed when both the forcing amplitude and frequency are varied, ranging from low up to elevated excitations. The coexistence of competing attractors with different characteristics is analyzed. Both the non-resonant and the resonant behavior are observed, as well as ranges of inevitable escape. Versatility of behavior is highlighted, which may be attractive in applications. Special attention is devoted to the effects of the tip-sample separation distance, since this aspect is of fundamental importance to understand the operation of an AFM. We explore the metamorphoses of the multistability region when the tip-sample separation distance is varied. To have a complete description of the AFM response, comprehensive behavior charts are introduced to detect the theoretical boundaries of appearance and disappearance of the main attractors. Also, extensive numerical simulations investigate the AFM response when both the forcing amplitude and the tip-sample separation distance are considered as control parameters. The main features are analyzed in detail and the obtained results are interpreted in terms of oscillations of the cantilever-tip ensemble. However, we note that all the aforementioned results represent the limit when disturbances are absent, which never occurs in practice. Here comes the importance of overcoming local investigations and exploring dynamics from a global perspective, by introducing dynamical integrity concepts. To extend the AFM results to the practical case where disturbances exist, we develop a dynamical integrity analysis. After performing a systematic basin of attraction analysis, integrity

  14. Two-dimensional dopant profiling for shallow junctions by TEM and AFM

    International Nuclear Information System (INIS)

    Yoo, K.

    2000-01-01

    The present work concerns the development of the Etch/TEM and Etch/AFM methods to obtain quantitative 2-D dopant profiles for the ultra shallow p-n junctions of the next generation of metal-oxide-semiconductor field effect transistors (MOSFETs). For these methods, thin foil (TEM) or bulk (AFM) cross-sectional specimens were etched using a dopant selective chemical so that local areas of the dopant implanted source/drain (S/D) regions were etched to different depths. The surface topography of the S/D regions was determined from the thickness fringes for the TEM method and by the direct measurement for the AFM method. The local etched depths were converted to etch rates, and these were then converted to corresponding 1-D and 2-D dopant profiles by the experimentally independent etch rate calibration curves. Shallow junction MOSFET samples were designed and fabricated with junction depths 60nm (n + /p), 80nm (n + /p) and 120nm (p + /n) using 0.25μm process technology. A new method using SOG (Spin-on-Glass) contributed to the high quality XTEM thin foil specimens. Controlled stirring of the etchant increased the dopant concentration selectivity and etching consistency. Computer modelling simulated the isotropic etching behaviours, which can introduce the significant error in dopant profiling for shallow and abrupt junction samples. Comprehensive quantitative results enabled the optimum etching time to be determined for the first time. Etch/TEM method gave 1-D dopant profiles that showed good agreement with 1-D Spreading Resistance Probe (SRP) dopant profiles for determining junction depths. 2-D dopant profiles gave L eff , i.e. the shortest lateral distance between the S/D junctions, of major importance for MOSFET performance. Values for L eff of 161, 159 and 123nm were determined from 60, 80 and 120nm junction depth samples respectively, compared with the 215nm MOSFET gate length. The resolution and accuracy of the Etch/TEM method are estimated as 2 and 10nm

  15. A Comparison of Seasonal and Interannual Variability of Soil Dust Aerosols Over the Atlantic Ocean as Inferred by the Toms AI and AVHRR AOT Retrievals

    Science.gov (United States)

    Cakmur, R. V.; Miller, R. L.; Tegen, Ina; Hansen, James E. (Technical Monitor)

    2001-01-01

    The seasonal cycle and interannual variability of two estimates of soil (or 'mineral') dust aerosols are compared: Advanced Very High Resolution Radiometer (AVHRR) aerosol optical thickness (AOT) and Total Ozone Mapping Spectrometer (TOMS) aerosol index (AI), Both data sets, comprising more than a decade of global, daily images, are commonly used to evaluate aerosol transport models. The present comparison is based upon monthly averages, constructed from daily images of each data set for the period between 1984 and 1990, a period that excludes contamination from volcanic eruptions. The comparison focuses upon the Northern Hemisphere subtropical Atlantic Ocean, where soil dust aerosols make the largest contribution to the aerosol load, and are assumed to dominate the variability of each data set. While each retrieval is sensitive to a different aerosol radiative property - absorption for the TOMS AI versus reflectance for the AVHRR AOT - the seasonal cycles of dust loading implied by each retrieval are consistent, if seasonal variations in the height of the aerosol layer are taken into account when interpreting the TOMS AI. On interannual time scales, the correlation is low at most locations. It is suggested that the poor interannual correlation is at least partly a consequence of data availability. When the monthly averages are constructed using only days common to both data sets, the correlation is substantially increased: this consistency suggests that both TOMS and AVHRR accurately measure the aerosol load in any given scene. However, the two retrievals have only a few days in common per month so that these restricted monthly averages have a large uncertainty. Calculations suggest that at least 7 to 10 daily images are needed to estimate reliably the average dust load during any particular month, a threshold that is rarely satisfied by the AVHRR AOT due to the presence of clouds in the domain. By rebinning each data set onto a coarser grid, the availability of

  16. AFM characterization of nonwoven material functionalized by ZnO sputter coating

    International Nuclear Information System (INIS)

    Deng Bingyao; Yan Xiong; Wei Qufu; Gao Weidong

    2007-01-01

    Sputter coatings provide new approaches to the surface functionalization of textile materials. In this study, polyethylene terephthalate (PET) nonwoven material was used as a substrate for creating functional nanostructures on the fiber surfaces. A magnetron sputter coating was used to deposit functional zinc oxide (ZnO) nanostructures onto the nonwoven substrate. The evolution of the surface morphology of the fibers in the nonwoven web was examined using atomic force microscopy (AFM). The AFM observations revealed a significant difference in the morphology of the fibers before and after the sputter coating. The AFM images also indicated the effect of the sputtering conditions on the surface morphology of the fibers. The increase in the sputtering time led to the growth of the ZnO grains on the fiber surfaces. The higher pressure in the sputtering chamber could cause the formation of larger grains on the fiber surfaces. The higher power used also generated larger grains on the fiber surfaces

  17. A concept for automated nanoscale atomic force microscope (AFM) measurements using a priori knowledge

    International Nuclear Information System (INIS)

    Recknagel, C; Rothe, H

    2009-01-01

    The nanometer coordinate measuring machine (NCMM) is developed for comparatively fast large area scans with high resolution. The system combines a metrological atomic force microscope (AFM) with a precise positioning system. The sample is moved under the probe system via the positioning system achieving a scan range of 25 × 25 × 5 mm 3 with a resolution of 0.1 nm. A concept for AFM measurements using a priori knowledge is implemented. The a priori knowledge is generated through measurements with a white light interferometer and the use of CAD data. Dimensional markup language is used as a transfer and target format for a priori knowledge and measurement data. Using the a priori knowledge and template matching algorithms combined with the optical microscope of the NCMM, the region of interest can automatically be identified. In the next step the automatic measurement of the part coordinate system and the measurement elements with the AFM sensor of the NCMM is done. The automatic measurement involves intelligent measurement strategies, which are adapted to specific geometries of the measurement feature to reduce measurement time and drift effects

  18. Systematic UHV-AFM experiments on Na nano-particles and nano-structures in NaCl

    NARCIS (Netherlands)

    Sugonyako, A.V.; Turkin, A.A.; Gaynutdinov, R.; Vainshtein, D.I.; Hartog, H.W. den; Bukharaev, A.A.

    2005-01-01

    Results of systematic AFM (atomic force microscopy) experiments on heavily and moderatly irradiated NaCl samples are presented. The sodium nanoparticles and structures of nanoparticles are poduced in sodium chloride during irradiation. The AFM images of the nanoparticles have been obtained in ultra

  19. Immunoglobulin GM and KM Allotypes and Prevalence of Anti-LKM1 Autoantibodies in Patients with Hepatitis C Virus Infection

    OpenAIRE

    Muratori, Paolo; Sutherland, Susan E.; Muratori, Luigi; Granito, Alessandro; Guidi, Marcello; Pappas, Georges; Lenzi, Marco; Bianchi, Francesco B.; Pandey, Janardan P.

    2006-01-01

    GM and KM allotypes—genetic markers of immunoglobulin (Ig) γ and κ chains, respectively—are associated with humoral immunity to several infection- and autoimmunity-related epitopes. We hypothesized that GM and KM allotypes contribute to the generation of autoantibodies to liver/kidney microsomal antigen 1 (LKM1) in hepatitis C virus (HCV)-infected persons. To test this hypothesis, we characterized 129 persons with persistent HCV infection for several GM and KM markers and for anti-LKM1 antibo...

  20. AFM cantilever with in situ renewable mercury microelectrode

    NARCIS (Netherlands)

    Schön, Peter Manfred; Geerlings, J.; Tas, Niels Roelof; Sarajlic, Edin

    2013-01-01

    We report here first results obtained on a novel, in situ renewable mercury microelectrode integrated into an atomic force microscopy (AFM) cantilever. Our approach is based on a fountain pen probe with appropriate dimensions enabling reversible filling with(nonwetting) mercury under changing the

  1. In situ AFM study on barite (0 0 1) surface dissolution in NaCl solutions at 30 °C

    International Nuclear Information System (INIS)

    Kuwahara, Yoshihiro; Makio, Masato

    2014-01-01

    Highlights: • We examined barite surface dissolution behavior in NaCl solutions by AFM. • Step retreat and step splitting behavior changed with the NaCl concentration. • Etch pit formation and development differed in each NaCl solution. • Step retreat and etch pit growth rates increased with the NaCl concentration. • We assessed the effects of temperature and NaCl concentration on these rates. - Abstract: This paper reports in situ observations on barite (0 0 1) surface dissolution behavior in 0.1–0.001 M NaCl solutions at 30 °C using atomic force microscopy (AFM). The step retreating on barite (0 0 1) surfaces changed with increasing NaCl solution concentrations. In solutions with a higher NaCl concentration (⩾0.01 M), many steps showed curved or irregular fronts during the later experimental stage, while almost all steps in solutions with a lower NaCl concentration exhibited straight or angular fronts, even during the late stage. The splitting phenomenon of the initial 〈h k 0〉 one-layer steps (7.2 Å) into two half-layer steps (3.6 Å) occurred in all NaCl solutions, while that of the initial [0 1 0] one-layer steps observed only in the 0.1 M NaCl solution. The step retreat rates increased with an increasing NaCl solution concentration. We observed triangular etch pit and deep etch pit formation in all NaCl solutions, which tended to form late in solutions with lower NaCl concentrations. The deep etch pit morphology changed with increasing NaCl solution concentrations. A hexagonal form elongated in the [0 1 0] direction was bounded by the {1 0 0}, {3 1 0}, and (0 0 1) faces in a 0.001 M NaCl solution, and a rhombic form was bounded by the {5 1 0} and (0 0 1) faces in 0.01 M and 0.1 M NaCl solutions. An intermediate form was observed in a 0.005 M NaCl solution, which was defined by {1 0 0}, a curved face tangent to the [0 1 0] direction, {3 1 0}, and (0 0 1) faces: the intermediate form appeared between the hexagonal and rhombic forms in

  2. Remotely sensed vegetation phenology for describing and predicting the biomes of South Africa

    CSIR Research Space (South Africa)

    Wessels, Konrad J

    2011-02-01

    Full Text Available the distribution of the recently redefined biomes be predicted based on remotely sensed, phenology and productivity metrics? Ten-day, 1 km, NDVI AVHRR were analysed for the period 1985 to 2000. Phenological metrics such as start, end and length of the growing...

  3. Internal γ Decay and the Superallowed Branching Ratio for the β+ Emitter Km38

    Science.gov (United States)

    Leach, K. G.; Svensson, C. E.; Ball, G. C.; Leslie, J. R.; Austin, R. A. E.; Bandyopadhyay, D.; Barton, C.; Bassiachvilli, E.; Ettenauer, S.; Finlay, P.; Garrett, P. E.; Grinyer, G. F.; Hackman, G.; Melconian, D.; Morton, A. C.; Mythili, S.; Newman, O.; Pearson, C. J.; Pearson, M. R.; Phillips, A. A.; Savajols, H.; Schumaker, M. A.; Wong, J.

    2008-05-01

    The branching ratio for the superallowed β+ decay of Km38 was measured at TRIUMF’s ISAC radioactive ion beam facility. The M3 internal transition between the isomer and the ground state of Km38 was observed with a branching ratio of 330(43) ppm. A search for the nonanalogue β-decay branch to the first excited 0+ state in Ar38 was also performed and yielded an upper limit of ≤12ppm at 90% C.L. These measurements lead to a revised superallowed branching ratio for Km38 of 99.967(4)%, and increase the Km38 ft value by its entire quoted uncertainty to ft=3052.1(10)s. Implications for tests of the nuclear-structure dependent corrections in superallowed β decays and the extraction of the Cabibbo-Kobayashi-Maskawa matrix element Vud are discussed.

  4. Amyloid and membrane complexity: The toxic interplay revealed by AFM.

    Science.gov (United States)

    Canale, Claudio; Oropesa-Nuñez, Reinier; Diaspro, Alberto; Dante, Silvia

    2018-01-01

    Lipid membranes play a fundamental role in the pathological development of protein misfolding diseases. Several pieces of evidence suggest that the lipid membrane could act as a catalytic surface for protein aggregation. Furthermore, a leading theory indicates the interaction between the cell membrane and misfolded oligomer species as the responsible for cytotoxicity, hence, for neurodegeneration in disorders such as Alzheimer's and Parkinson's disease. The definition of the mechanisms that drive the interaction between pathological protein aggregates and plasma membrane is fundamental for the development of effective therapies for a large class of diseases. Atomic force microscopy (AFM) has been employed to study how amyloid aggregates affect the cell physiological properties. Considerable efforts were spent to characterize the interaction with model systems, i.e., planar supported lipid bilayers, but some works also addressed the problem directly on living cells. Here, an overview of the main works involving the use of the AFM on both model system and living cells will be provided. Different kind of approaches will be presented, as well as the main results derived from the AFM analysis. Copyright © 2017 Elsevier Ltd. All rights reserved.

  5. Long-term trends in vegetation phenology and productivity over Namaqualand using the GIMMS AVHRR NDVI3g data from 1982 to 2011

    CSIR Research Space (South Africa)

    Davis, CL

    2017-07-01

    Full Text Available Vegetation monitoring of arid and semi-arid environments using remotely sensed vegetation indices over long periods of time is essential to improve the understanding of the processes related to change. In this paper, 30 years of biweekly AVHRR NDVI3...

  6. A fully-automated neural network analysis of AFM force-distance curves for cancer tissue diagnosis

    Science.gov (United States)

    Minelli, Eleonora; Ciasca, Gabriele; Sassun, Tanya Enny; Antonelli, Manila; Palmieri, Valentina; Papi, Massimiliano; Maulucci, Giuseppe; Santoro, Antonio; Giangaspero, Felice; Delfini, Roberto; Campi, Gaetano; De Spirito, Marco

    2017-10-01

    Atomic Force Microscopy (AFM) has the unique capability of probing the nanoscale mechanical properties of biological systems that affect and are affected by the occurrence of many pathologies, including cancer. This capability has triggered growing interest in the translational process of AFM from physics laboratories to clinical practice. A factor still hindering the current use of AFM in diagnostics is related to the complexity of AFM data analysis, which is time-consuming and needs highly specialized personnel with a strong physical and mathematical background. In this work, we demonstrate an operator-independent neural-network approach for the analysis of surgically removed brain cancer tissues. This approach allowed us to distinguish—in a fully automated fashion—cancer from healthy tissues with high accuracy, also highlighting the presence and the location of infiltrating tumor cells.

  7. FRAME (Force Review Automation Environment): MATLAB-based AFM data processor.

    Science.gov (United States)

    Partola, Kostyantyn R; Lykotrafitis, George

    2016-05-03

    Data processing of force-displacement curves generated by atomic force microscopes (AFMs) for elastic moduli and unbinding event measurements is very time consuming and susceptible to user error or bias. There is an evident need for consistent, dependable, and easy-to-use AFM data processing software. We have developed an open-source software application, the force review automation environment (or FRAME), that provides users with an intuitive graphical user interface, automating data processing, and tools for expediting manual processing. We did not observe a significant difference between manually processed and automatically processed results from the same data sets. Copyright © 2016 Elsevier Ltd. All rights reserved.

  8. Ultra-high aspect ratio replaceable AFM tips using deformation-suppressed focused ion beam milling

    DEFF Research Database (Denmark)

    Savenko, Alexey; Yildiz, Izzet; Petersen, Dirch Hjorth

    2013-01-01

    Fabrication of ultra-high aspect ratio exchangeable and customizable tips for atomic force microscopy (AFM) using lateral focused ion beam (FIB) milling is presented. While on-axis FIB milling does allow high aspect ratio (HAR) AFM tips to be defined, lateral milling gives far better flexibility...

  9. Adhesion experiments using an AFM-Parameters of influence

    NARCIS (Netherlands)

    Dos Santos Ferreira, O.; Gelinck, E.R.M.; Graaf, D. de; Fischer, H.

    2010-01-01

    Adhesion measurements were performed by AFM (Atomic Force Microscopy). It was shown that many parameters need to be controlled in order to provide reproducible and quantitative results. Adhesion forces were shown to depend on combination of materials characteristics and testing geometry as well as

  10. Quinoline compound KM11073 enhances BMP-2-dependent osteogenic differentiation of C2C12 cells via activation of p38 signaling and exhibits in vivo bone forming activity.

    Directory of Open Access Journals (Sweden)

    Seung-hwa Baek

    Full Text Available Recombinant human bone morphogenetic protein (rhBMP-2 has been approved by the FDA for clinical application, but its use is limited due to high cost and a supra-physiological dose for therapeutic efficacy. Therefore, recent studies have focused on the generation of new therapeutic small molecules to induce bone formation or potentiate the osteogenic activity of BMP-2. Here, we show that [4-(7-chloroquinolin-4-yl piperazino][1-phenyl-5-(trifluoromethyl-1H-pyrazol-4-yl]methanone (KM11073 strongly enhances the BMP-2-stimulated induction of alkaline phosphatase (ALP, an early phase biomarker of osteoblast differentiation, in bi-potential mesenchymal progenitor C2C12 cells. The KM11073-mediated ALP induction was inhibited by the BMP antagonist noggin, suggesting that its osteogenic activity occurs via BMP signaling. In addition, a pharmacological inhibition study suggested the involvement of p38 activation in the osteogenic action of KM11073 accompanied by enhanced expression of BMP-2, -6, and -7 mRNA. Furthermore, the in vivo osteogenic activity of KM11073 was confirmed in zebrafish and mouse calvarial bone formation models, suggesting the possibility of its single use for bone formation. In conclusion, the combination of rhBMP-2 with osteogenic small molecules could reduce the use of expensive rhBMP-2, mitigating the undesirable side effects of its supra-physiological dose for therapeutic efficacy. Moreover, due to their inherent physical properties, small molecules could represent the next generation of regenerative medicine.

  11. Devices for launching 0.1-g projectiles to 150 km/s or more to initiate fusion. Part 1. Magnetic-gradient and electrostatic accelerators

    International Nuclear Information System (INIS)

    Brittingham, J.N.

    1979-01-01

    The feasibility of using magnetic-gradient and electrostatic accelerators to launch a 0.1-g projectile to hypervelocities (150 km/s or more) is studied. Such hypervelocity projectiles could be used to ignite deuterium-tritium fuel pellets in a fusion reactor. For the magnetic-gradient accelerator, several types of projectile were studied: shielded and unshielded copper, ferromagnetic, and superconducting. The calculations revealed the superconducting projectile to be the best of those materials. It would require a 3.2-km-long magnetic-gradient accelerator and achieve a 92% efficiency. This accelerator-projectile combination would be the one most likely to launch a 0.1-g projectile to 150 km/s or more. Its components would cost $58.9 million. The electrostatic accelerator was found to be impractical because of its excessive length of 23 km

  12. Spin dynamics and quantum tunneling in Fe8 nanomagnet and in AFM rings by NMR

    Science.gov (United States)

    Baek, Seung-Ho

    In this thesis, our main interest has been to investigate the spin dynamics and quantum tunneling in single molecule magnets (SMMs). For this we have selected two different classes of SMMs: a ferromagnetic total high spin S = 10 cluster Fe8 and antiferromagnetic (AFM) ring-type clusters. For Fe8, our efforts have been devoted to the investigation of the quantum tunneling of magnetization in the very low temperature region. The most remarkable experimental finding in Fe8 is that the nuclear spin-lattice relaxation rate (1/T1) at low temperatures takes place via strong collision mechanism, and thus it allows to measure directly the tunneling rate vs. T and H for the first time. For AFM rings, we have shown that 1/T1 probes the thermal fluctuations of the magnetization in the intermediate temperature range. We find that the fluctuations are dominated by a single characteristic frequency which has a power-law T-dependence indicative of fluctuations due to electron-acoustic phonon interactions.

  13. 1 Tb/s x km multimode fiber link combining WDM transmission and low-linewidth lasers.

    Science.gov (United States)

    Gasulla, I; Capmany, J

    2008-05-26

    We have successfully demonstrated an error-free transmission of 10 x 20 Gb/s 200 GHz-spaced ITU channels through a 5 km link of 62.5-microm core-diameter graded-index multimode silica fiber. The overall figure corresponds to an aggregate bit rate per length product of 1 Tb/s x km, the highest value ever reported to our knowledge. Successful transmission is achieved by a combination of low-linewidth DFB lasers and the central launch technique.

  14. Optimization of Easy Atomic Force Microscope (ezAFM) Controls for Semiconductor Nanostructure Profiling

    Science.gov (United States)

    2017-09-01

    ARL-MR-0965 ● SEP 2017 US Army Research Laboratory Optimization of Easy Atomic Force Microscope (ezAFM) Controls for... Optimization of Easy Atomic Force Microscope (ezAFM) Controls for Semiconductor Nanostructure Profiling by Satwik Bisoi Science and...REPORT TYPE Memorandum Report 3. DATES COVERED (From - To) 2017 July 05–2017 August 18 4. TITLE AND SUBTITLE Optimization of Easy Atomic Force

  15. Evaluation of a 12-km Satellite-Era Reanalysis of Surface Mass Balance for the Greenland Ice Sheet

    Science.gov (United States)

    Cullather, R. I.; Nowicki, S.; Zhao, B.; Max, S.

    2016-12-01

    The recent contribution to sea level change from the Greenland Ice Sheet is thought to be strongly driven by surface processes including melt and runoff. Global reanalyses are potential means of reconstructing the historical time series of ice sheet surface mass balance (SMB), but lack spatial resolution needed to resolve ablation areas along the periphery of the ice sheet. In this work, the Modern-Era Retrospective analysis for Research and Applications, version 2 (MERRA-2) is used to examine the spatial and temporal variability of surface melt over the Greenland Ice Sheet. MERRA-2 is produced for the period 1980 to the present at a grid spacing of ½° latitude by ⅝° longitude, and includes snow hydrology processes including compaction, meltwater percolation and refreezing, runoff, and a prognostic surface albedo. The configuration of the MERRA-2 system allows for the background model - the Goddard Earth Observing System model, version 5 (GEOS-5) - to be carried in phase space through analyzed states via the computation of analysis increments, a capability referred to as "replay". Here, a MERRA-2 replay integration is conducted in which atmospheric forcing fields are interpolated and adjusted to sub- atmospheric grid-scale resolution. These adjustments include lapse-rate effects on temperature, humidity, precipitation, and other atmospheric variables that are known to have a strong elevation dependency over ice sheets. The surface coupling is performed such that mass and energy are conserved. The atmospheric forcing influences the surface representation, which operates on land surface tiles with an approximate 12-km spacing. This produces a high-resolution, downscaled SMB which is interactively coupled to the reanalysis model. We compare the downscaled SMB product with other reanalyses, regional climate model values, and a second MERRA-2 replay in which the background model has been replaced with a 12-km, non-hydrostatic version of GEOS-5. The assessment

  16. Modelling and mapping the suitability of European forest formations at 1-km resolution

    DEFF Research Database (Denmark)

    Casalegno, Stefano; Amatulli, Giuseppe; Bastrup-Birk, Annemarie

    2011-01-01

    factors. Here, we used the bootstrap-aggregating machine-learning ensemble classifier Random Forest (RF) to derive a 1-km resolution European forest formation suitability map. The statistical model use as inputs more than 6,000 field data forest inventory plots and a large set of environmental variables...

  17. Tip-enhanced Raman mapping with top-illumination AFM.

    Science.gov (United States)

    Chan, K L Andrew; Kazarian, Sergei G

    2011-04-29

    Tip-enhanced Raman mapping is a powerful, emerging technique that offers rich chemical information and high spatial resolution. Currently, most of the successes in tip-enhanced Raman scattering (TERS) measurements are based on the inverted configuration where tips and laser are approaching the sample from opposite sides. This results in the limitation of measurement for transparent samples only. Several approaches have been developed to obtain tip-enhanced Raman mapping in reflection mode, many of which involve certain customisations of the system. We have demonstrated in this work that it is also possible to obtain TERS nano-images using an upright microscope (top-illumination) with a gold-coated Si atomic force microscope (AFM) cantilever without significant modification to the existing integrated AFM/Raman system. A TERS image of a single-walled carbon nanotube has been achieved with a spatial resolution of ∼ 20-50 nm, demonstrating the potential of this technique for studying non-transparent nanoscale materials.

  18. Tip-enhanced Raman mapping with top-illumination AFM

    Energy Technology Data Exchange (ETDEWEB)

    Chan, K L Andrew; Kazarian, Sergei G, E-mail: s.kazarian@imperial.ac.uk [Department of Chemical Engineering, Imperial College London, SW7 2AZ (United Kingdom)

    2011-04-29

    Tip-enhanced Raman mapping is a powerful, emerging technique that offers rich chemical information and high spatial resolution. Currently, most of the successes in tip-enhanced Raman scattering (TERS) measurements are based on the inverted configuration where tips and laser are approaching the sample from opposite sides. This results in the limitation of measurement for transparent samples only. Several approaches have been developed to obtain tip-enhanced Raman mapping in reflection mode, many of which involve certain customisations of the system. We have demonstrated in this work that it is also possible to obtain TERS nano-images using an upright microscope (top-illumination) with a gold-coated Si atomic force microscope (AFM) cantilever without significant modification to the existing integrated AFM/Raman system. A TERS image of a single-walled carbon nanotube has been achieved with a spatial resolution of {approx} 20-50 nm, demonstrating the potential of this technique for studying non-transparent nanoscale materials.

  19. Tip-enhanced Raman mapping with top-illumination AFM

    International Nuclear Information System (INIS)

    Chan, K L Andrew; Kazarian, Sergei G

    2011-01-01

    Tip-enhanced Raman mapping is a powerful, emerging technique that offers rich chemical information and high spatial resolution. Currently, most of the successes in tip-enhanced Raman scattering (TERS) measurements are based on the inverted configuration where tips and laser are approaching the sample from opposite sides. This results in the limitation of measurement for transparent samples only. Several approaches have been developed to obtain tip-enhanced Raman mapping in reflection mode, many of which involve certain customisations of the system. We have demonstrated in this work that it is also possible to obtain TERS nano-images using an upright microscope (top-illumination) with a gold-coated Si atomic force microscope (AFM) cantilever without significant modification to the existing integrated AFM/Raman system. A TERS image of a single-walled carbon nanotube has been achieved with a spatial resolution of ∼ 20-50 nm, demonstrating the potential of this technique for studying non-transparent nanoscale materials.

  20. Aflatoxin M1 levels in raw milk, pasteurised milk and infant formula

    Directory of Open Access Journals (Sweden)

    Sharaf S. Omar

    2016-06-01

    Full Text Available The incidence of contamination of aflatoxin M1 (AFM1 in milk samples collected from the Jordanian market was investigated by using the competitive enzyme linked immunosorbent assay (ELISA technique. A total of 175 samples were collected during 2014-2015. All tested samples were contaminated with various levels of AFM1 ranging from 9.71 to 288.68 ng/kg. The concentration of AFM1 in 66% of fresh milk samples was higher than the maximum tolerance limit accepted by the European Union (50 ng/kg and 23% higher than the maximum tolerance limit accepted by the US (500 ng/kg. Percentages of contaminated raw cow, sheep, goat and camel milk exceeding the European tolerance limit were 60, 85, 75 and 0%, respectively. Of AFM1 contaminated pasteurised cow milk samples, 12% exceeded the European tolerance limit with a range of contamination between 14.60 and 216.78 ng/kg. For infant formula samples, the average concentration of AFM1 was 120.26 ng/kg (range from 16.55 to 288.68 ng/kg, the concentration of AFM1 in 85% of infant formula samples was higher than the maximum tolerance limit accepted by the European Union and the US (25 ng/kg.

  1. Phase shifting-based debris effect detection in USV-assisted AFM nanomachining

    Energy Technology Data Exchange (ETDEWEB)

    Shi, Jialin [State Key Laboratory of Robotics, Shenyang Institute of Automation, Chinese Academy of Sciences (CAS), Shenyang, Liaoning 110016 (China); University of the Chinese Academy of Sciences, Beijing 100049 (China); Beijing Advanced Innovation Center for Imaging Technology, Capital Normal University, Beijing 100049 (China); Liu, Lianqing, E-mail: lianqingliu@sia.cn [State Key Laboratory of Robotics, Shenyang Institute of Automation, Chinese Academy of Sciences (CAS), Shenyang, Liaoning 110016 (China); Yu, Peng; Cong, Yang [State Key Laboratory of Robotics, Shenyang Institute of Automation, Chinese Academy of Sciences (CAS), Shenyang, Liaoning 110016 (China); Li, Guangyong [Department of Electrical and Computer Engineering, University of Pittsburgh, Pittsburgh, PA 15213 (United States)

    2017-08-15

    Highlights: • The mechanism of the debris effect on machining depth in force control mode operation is analyzed. • The relationship between phase shifting and pile-up of debris is investigated. • The phase shifting-based method is hardly affected by the pile-up of debris. • Debris effect detection by phase shifting-based method is achived. - Abstract: Atomic force microscopy (AFM) mechanical-based lithography attracts much attention in nanomanufacturing due to its advantages of low cost, high precision and high resolution. However, debris effects during mechanical lithography often lead to an unstable machining process and inaccurate results, which limits further applications of AFM-based lithography. There is a lack of a real-time debris detection approach, which is the prerequisite to eventually eliminating the influence of the debris, and of a method that can solve the above problems well. The ultrasonic vibration (USV)-assisted AFM has the ability to sense the machining depth in real time by detecting the phase shifting of cantilever. However, whether the pile-up of debris affect the phase response of cantilever is still lack of investigation. Therefore, we analyzed the mechanism of the debris effect on force control mode and investigated the relationship between phase shifting and pile-up of debris. Theoretical analysis and experimental results reveal that the pile-up of debris have negligible effect on phase shifting of cantilever. Therefore, the phase shifting-based method can detect the debris effect on machining depth in force control mode of AFM machining.

  2. Comparación de los productos de TSM L3 generados a partir de los sensores AVHRR y MODIS frente al Golfo San Jorge, Argentina

    Directory of Open Access Journals (Sweden)

    L. Allega

    2017-12-01

    Full Text Available Desde principios de la década de los 80, el sensor AVHRR a bordo de los satélites NOAA ha provisto de estimaciones de la temperatura de la superficie del mar (TSM a la comunidad científica en general. Hacia finales de la década de los 90, surge una nueva generación de radiómetros que combinan una mayor gama de mediciones espectrales con mejoras en la tecnología, como lo es el sensor  MODIS a bordo de los satélites Terra y Aqua. El desarrollo de este último sensor se basó en los años de trayectoria de la serie NOAA/AVHRR. La comprensión de la relación entre los productos derivados de distintos sensores es fundamental para el seguimiento continuo a largo plazo de cualquier variable y de la construcción de serie de tiempos combinados. El objetivo del presente trabajo fue realizar una comparación de los valores mensuales de TSM para el período 2003-2006 calculadas a partir de datos de la serie NOAA/AVHRR vs Aqua/MODIS sobre un sector de la Plataforma Continental Argentina frente al Golfo San Jorge. El análisis de las isotermas muestra un patrón de distribución similar durante todos los meses para ambos sensores. El coeficiente de correlación de Pearson tanto en el análisis estacional como mensual fue alto (> 0,8. El análisis comparativo de la temperatura medida en ambos sensores muestra que los productos de TSM son similares, teniendo en cuenta que la diferencia media de temperatura entre ambos sensores es inferior a 0,5ºC. Por lo tanto, para el estudio de largas series de tiempo de TSM en la plataforma continental argentina se puede utilizar en forma continua las mediciones de Aqua/MODIS, cuando ya no se disponen las de NOAA/AVHRR.

  3. Laser-damage susceptibility of nodular defects in dielectric mirror coatings: AFM measurements and electric-field modeling

    International Nuclear Information System (INIS)

    Kozlowski, M.R.; DeFord, J.F.; Staggs, M.C.

    1993-01-01

    Atomic force microscopy (AFM) and electromagnetic field modeling were used to study the influence of nodular coating defects on laser-induced damage of multilayer dielectric coatings. In studies of HfO 2 /SiO 2 mirrors with 1.06 μm illumination, AFM results showed that nodular defects with high dome heights (>0.6 μm) were most susceptible to laser damage. Crater defects, formed by nodules ejected from the coating prior to illumination, were not damaged when illuminated over the same range of fluences. A finite-difference time-domain electromagnetic modeling code was used to study the influence of 3-D nodule defects on the E-field distribution within the interference coating. The modeling results show that Enfield enhancements as large as a factor of 4 can be present at the defects. Crater defects, however, result in minimal enhancement of the E-fields within the coating. These modeling results are consistent with the AFM experimental data, indicating that E-field enhancement is a contributing mechanism in defect-dominated laser damage of optical coatings

  4. AFM-based force spectroscopy measurements of mature amyloid fibrils of the peptide glucagon

    DEFF Research Database (Denmark)

    Dong, M. D.; Hovgaard, M. B.; Mamdouh, W.

    2008-01-01

    We report on the mechanical characterization of individual mature amyloid fibrils by atomic force microscopy (AFM) and AFM-based single-molecule force spectroscopy (SMFS). These self-assembling materials, formed from the 29-residue amphiphatic peptide hormone glucagon, were found to display...... a reversible elastic behaviour. Based on AFM morphology and SMFS studies, we suggest that the observed elasticity is due to a force-induced conformational transition which is reversible due to the beta-helical conformation of protofibrils, allowing a high degree of extension. The elastic properties...... of such mature fibrils contribute to their high stability, suggesting that the internal hydrophobic interactions of amyloid fibrils are likely to be of fundamental importance in the assembly of amyloid fibrils and therefore for the understanding of the progression of their associated pathogenic disorders...

  5. Quantitative analysis and classification of AFM images of human hair.

    Science.gov (United States)

    Gurden, S P; Monteiro, V F; Longo, E; Ferreira, M M C

    2004-07-01

    The surface topography of human hair, as defined by the outer layer of cellular sheets, termed cuticles, largely determines the cosmetic properties of the hair. The condition of the cuticles is of great cosmetic importance, but also has the potential to aid diagnosis in the medical and forensic sciences. Atomic force microscopy (AFM) has been demonstrated to offer unique advantages for analysis of the hair surface, mainly due to the high image resolution and the ease of sample preparation. This article presents an algorithm for the automatic analysis of AFM images of human hair. The cuticular structure is characterized using a series of descriptors, such as step height, tilt angle and cuticle density, allowing quantitative analysis and comparison of different images. The usefulness of this approach is demonstrated by a classification study. Thirty-eight AFM images were measured, consisting of hair samples from (a) untreated and bleached hair samples, and (b) the root and distal ends of the hair fibre. The multivariate classification technique partial least squares discriminant analysis is used to test the ability of the algorithm to characterize the images according to the properties of the hair samples. Most of the images (86%) were found to be classified correctly.

  6. GHRSST Level 3C North Atlantic Regional Subskin Sea Surface Temperature from the Advanced Very High Resolution Radiometer (AVHRR) on NOAA-19 (GDS version 2)

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A Group for High Resolution Sea Surface Temperature (GHRSST) dataset for the North Atlantic Region (NAR) from the Advanced Very High Resolution Radiometer (AVHRR) on...

  7. Feasibility of multi-walled carbon nanotube probes in AFM anodization lithography

    International Nuclear Information System (INIS)

    Choi, Ji Sun; Bae, Sukjong; Ahn, Sang Jung; Kim, Dal Hyun; Jung, Ki Young; Han, Cheolsu; Chung, Chung Choo; Lee, Haiwon

    2007-01-01

    Multi-walled carbon nanotube (CNT) tips were used in atomic force microscope (AFM) anodization lithography to investigate their advantages over conventional tips. The CNT tip required a larger threshold voltage than the mother silicon tip due to the Schottky barrier at the CNT-Si interface. Current-to-voltage curves distinguished the junction property between CNTs and mother tips. The CNT-platinum tip, which is more conductive than the CNT-silicon tip, showed promising results for AFM anodization lithography. Finally, the nanostructures with high aspect ratio were fabricated using a pulsed bias voltage technique as well as the CNT tip

  8. Immunoglobulin GM and KM allotypes and prevalence of anti-LKM1 autoantibodies in patients with hepatitis C virus infection.

    Science.gov (United States)

    Muratori, Paolo; Sutherland, Susan E; Muratori, Luigi; Granito, Alessandro; Guidi, Marcello; Pappas, Georges; Lenzi, Marco; Bianchi, Francesco B; Pandey, Janardan P

    2006-05-01

    GM and KM allotypes-genetic markers of immunoglobulin (Ig) gamma and kappa chains, respectively-are associated with humoral immunity to several infection- and autoimmunity-related epitopes. We hypothesized that GM and KM allotypes contribute to the generation of autoantibodies to liver/kidney microsomal antigen 1 (LKM1) in hepatitis C virus (HCV)-infected persons. To test this hypothesis, we characterized 129 persons with persistent HCV infection for several GM and KM markers and for anti-LKM1 antibodies. The heterozygous GM 1,3,17 23 5,13,21 phenotype was significantly associated with the prevalence of anti-LKM1 antibodies (odds ratio, 5.13; P=0.002), suggesting its involvement in this autoimmune phenomenon in HCV infection.

  9. A comparison of atomic force microscopy (AFM) and dynamic light scattering (DLS) methods to characterize nanoparticle size distributions

    International Nuclear Information System (INIS)

    Hoo, Christopher M.; Starostin, Natasha; West, Paul; Mecartney, Martha L.

    2008-01-01

    This paper compares the accuracy of conventional dynamic light scattering (DLS) and atomic force microscopy (AFM) for characterizing size distributions of polystyrene nanoparticles in the size range of 20-100 nm. Average DLS values for monosize dispersed particles are slightly higher than the nominal values whereas AFM values were slightly lower than nominal values. Bimodal distributions were easily identified with AFM, but DLS results were skewed toward larger particles. AFM characterization of nanoparticles using automated analysis software provides an accurate and rapid analysis for nanoparticle characterization and has advantages over DLS for non-monodispersed solutions.

  10. Controlled AFM detachments and movement of nanoparticles: gold clusters on HOPG at different temperatures.

    Science.gov (United States)

    Tripathi, Manoj; Paolicelli, Guido; D'Addato, Sergio; Valeri, Sergio

    2012-06-22

    The effect of temperature on the onset of movement of gold nanoclusters (diameter 27 nm) deposited on highly oriented pyrolytic graphite (HOPG) has been studied by atomic force microscopy (AFM) techniques. Using the AFM with amplitude modulation (tapping mode AFM) we have stimulated and controlled the movement of individual clusters. We show how, at room temperature, controlled detachments and smooth movements can be obtained for clusters having dimensions comparable to or smaller than the tip radius. Displacement is practically visible in real time and it can be started and stopped easily by adjusting only one parameter, the tip amplitude oscillation. Analysing the energy dissipation signal at the onset of nanocluster sliding we evaluated a detachment threshold energy as a function of temperature in the range 300-413 K. We also analysed single cluster thermal induced displacement and combining this delicate procedure with AFM forced movement behaviour we conclude that detachment threshold energy is directly related to the activation energy of nanocluster diffusion and it scales linearly with temperature as expected for a single-particle thermally activated process.

  11. Investigations of environmental induced effects on AlQ3 thin films by AFM phase imaging

    International Nuclear Information System (INIS)

    Shukla, Vivek Kumar; Kumar, Satyendra

    2007-01-01

    Tris(8-hydroxyquinoline) metal complex (AlQ 3 ) is a widely used light-emitting material in organic light emitting devices (OLEDs). The environmental stability is still a major problem with OLEDs and needs further improvement. In this report, an additional feature of Atomic Force Microscopy (AFM) was exploited with the aim to understand the environmental induced effects and physical phenomenon involved on AlQ 3 thin films. We have used phase imaging to identify the presence of other aggregation phases formed after annealing the thin film in different ambient and after white light exposure. An enhanced photoluminescence intensity is observed for the samples annealed in oxygen near 100 deg. C. The enhanced photoluminescence is understood in terms of formation of a new aggregation phase. The phase change and the fraction of new phase is estimated by phase images taken by atomic force microscopy (AFM). Light induced effects on AlQ 3 films exposed to white light in air and vacuum are characterized by atomic force microscopy (AFM) for surface morphology and phases present. The AFM images indicate enhanced crystallinity for the vacuum exposed samples. The phase with increased lifetime and hence enhanced crystallinity for vacuum exposed films has also been found by time correlated single photon counting (TCSPC) measurements. To the best of our knowledge, this study is applied for the first time on this material with the combination of topography and phase imaging in atomic force microscopy (AFM). The major aim was to take advantage of the additional feature of AFM-mode over the conventionally used

  12. Dense SDM (12-core × 3-mode) transmission over 527 km with 33.2-ns mode-dispersion employing low-complexity parallel MIMO frequency-domain equalization

    DEFF Research Database (Denmark)

    Shibahara, K.; Mizuno, T.; Takara, H.

    We demonstrate 12-core × 3-mode dense SDM transmission over 527 km graded-index multi-core few-mode fiber without mode-dispersion management. Employing low baud rate multi-carrier signal and frequency-domain equalization enables 33.2-ns DMD compensation with low computational complexity. © 2015 OSA...

  13. Competitor presence reduces internal attentional focus and improves 16.1km cycling time trial performance.

    Science.gov (United States)

    Williams, Emily L; Jones, Hollie S; Andy Sparks, S; Marchant, David C; Midgley, Adrian W; Mc Naughton, Lars R

    2015-07-01

    Whilst the presence of a competitor has been found to improve performance, the mechanisms influencing the change in selected work rates during direct competition have been suggested but not specifically assessed. The aim was to investigate the physiological and psychological influences of a visual avatar competitor during a 16.1-km cycling time trial performance, using trained, competitive cyclists. Randomised cross-over design. Fifteen male cyclists completed four 16.1km cycling time trials on a cycle ergometer, performing two with a visual display of themselves as a simulated avatar (FAM and SELF), one with no visual display (DO), and one with themselves and an opponent as simulated avatars (COMP). Participants were informed the competitive avatar was a similar ability cyclist but it was actually a representation of their fastest previous performance. Increased performance times were evident during COMP (27.8±2.0min) compared to SELF (28.7±1.9min) and DO (28.4±2.3min). Greater power output, speed and heart rate were apparent during COMP trial than SELF (pperformance. Competitive cyclists performed significantly faster during a 16.1-km competitive trial than when performing maximally, without a competitor. The improvement in performance was elicited due to a greater external distraction, deterring perceived exertion. Copyright © 2014 Sports Medicine Australia. Published by Elsevier Ltd. All rights reserved.

  14. Limits to detectability of land degradation by trend analysis of vegetation index data

    CSIR Research Space (South Africa)

    Wessels, Konrad J

    2012-10-01

    Full Text Available of reductions in seasonally-summed NDVI are systematically varied on sample data to simulate land degradation, after which the trend analysis was applied and its sensitivity evaluated. The study was based on a widely-used, 1 km2 AVHRR data set for a test area...

  15. A Study of Moisture Damage in Plastomeric Polymer Modified Asphalt Binder Using Functionalized AFM Tips

    Directory of Open Access Journals (Sweden)

    Rafiqul Tarefder

    2011-12-01

    Full Text Available In this study, moisture damage in plastomeric polymer modified asphalt binder is investigated using Atomic Force Microscopy (AFM with chemically functionalized AFM tips. Four different percentages of plastomeric polymers and two antistripping agents such as Kling Beta and Lime are used to modify a base asphalt binder. Chemical functional groups such as -COOH, -CH3, -NH3, and –OH, that are commonly present in plastomeric polymer modified asphalt system, are used to functionalize the AFM tips. The force distance mode of AFM is used to measure the adhesion forces between a modified asphalt sample surface and the functionalized AFM tips. This enables the measurement of adhesion within an asphalt binder system. It is shown that the adhesion force values in dry sample changed substantially from that in wet conditioned samples. It is evident from this study that plastomeric modification does not help reduce moisture damage in asphalt. The percentage change in adhesion forces due to moisture is about 20 nN for the lime modified samples, and about 50 nN for the Kling Beta modified samples. This indicates that lime is more effective than Kling Beta for reducing moisture damage in plastomeric polymer modified asphalt.

  16. Evaluating the consistency of the 1982-1999 NDVI trends in the Iberian Peninsula across four time-series derived from the AVHRR sensor: LTDR, GIMMS, FASIR, and PAL-II.

    Science.gov (United States)

    Alcaraz-Segura, Domingo; Liras, Elisa; Tabik, Siham; Paruelo, José; Cabello, Javier

    2010-01-01

    Successive efforts have processed the Advanced Very High Resolution Radiometer (AVHRR) sensor archive to produce Normalized Difference Vegetation Index (NDVI) datasets (i.e., PAL, FASIR, GIMMS, and LTDR) under different corrections and processing schemes. Since NDVI datasets are used to evaluate carbon gains, differences among them may affect nations' carbon budgets in meeting international targets (such as the Kyoto Protocol). This study addresses the consistency across AVHRR NDVI datasets in the Iberian Peninsula (Spain and Portugal) by evaluating whether their 1982-1999 NDVI trends show similar spatial patterns. Significant trends were calculated with the seasonal Mann-Kendall trend test and their spatial consistency with partial Mantel tests. Over 23% of the Peninsula (N, E, and central mountain ranges) showed positive and significant NDVI trends across the four datasets and an additional 18% across three datasets. In 20% of Iberia (SW quadrant), the four datasets exhibited an absence of significant trends and an additional 22% across three datasets. Significant NDVI decreases were scarce (croplands in the Guadalquivir and Segura basins, La Mancha plains, and Valencia). Spatial consistency of significant trends across at least three datasets was observed in 83% of the Peninsula, but it decreased to 47% when comparing across the four datasets. FASIR, PAL, and LTDR were the most spatially similar datasets, while GIMMS was the most different. The different performance of each AVHRR dataset to detect significant NDVI trends (e.g., LTDR detected greater significant trends (both positive and negative) and in 32% more pixels than GIMMS) has great implications to evaluate carbon budgets. The lack of spatial consistency across NDVI datasets derived from the same AVHRR sensor archive, makes it advisable to evaluate carbon gains trends using several satellite datasets and, whether possible, independent/additional data sources to contrast.

  17. Restoration of high-resolution AFM images captured with broken probes

    Science.gov (United States)

    Wang, Y. F.; Corrigan, D.; Forman, C.; Jarvis, S.; Kokaram, A.

    2012-03-01

    A type of artefact is induced by damage of the scanning probe when the Atomic Force Microscope (AFM) captures a material surface structure with nanoscale resolution. This artefact has a dramatic form of distortion rather than the traditional blurring artefacts. Practically, it is not easy to prevent the damage of the scanning probe. However, by using natural image deblurring techniques in image processing domain, a comparatively reliable estimation of the real sample surface structure can be generated. This paper introduces a novel Hough Transform technique as well as a Bayesian deblurring algorithm to remove this type of artefact. The deblurring result is successful at removing blur artefacts in the AFM artefact images. And the details of the fibril surface topography are well preserved.

  18. Determining the mechanical properties of electrospun poly-ε-caprolactone (PCL) nanofibers using AFM and a novel fiber anchoring technique.

    Science.gov (United States)

    Baker, Stephen R; Banerjee, Soham; Bonin, Keith; Guthold, Martin

    2016-02-01

    Due to its low cost, biocompatibility and slow bioresorption, poly-ε-caprolactone (PCL) continues to be a suitable material for select biomedical engineering applications. We used a combined atomic force microscopy (AFM)/optical microscopy technique to determine key mechanical properties of individual electrospun PCL nanofibers with diameters between 440-1040nm. Compared to protein nanofibers, PCL nanofibers showed much lower adhesion, as they slipped on the substrate when mechanically manipulated. We, therefore, first developed a novel technique to anchor individual PCL nanofibers to micrometer-sized ridges on a substrate, and then mechanically tested anchored nanofibers. When held at constant strain, tensile stress relaxed with fast and slow relaxation times of 1.0±0.3s and 8.8±3.1s, respectively. The total tensile modulus was 62±26MPa, the elastic (non-relaxing) component of the tensile modulus was 53±36MPa. Individual PCL fibers could be stretched elastically (without permanent deformation) to strains of 19-23%. PCL nanofibers are rather extensible; they could be stretched to a strain of at least 98%, and a tensile strength of at least 12MPa, before they slipped off the AFM tip. PCL nanofibers that had aged for over a month at ambient conditions became stiffer and less elastic. Our technique provides accurate nanofiber mechanical data, which are needed to guide construction of scaffolds for cells and other biomedical devices. Copyright © 2015 The Authors. Published by Elsevier B.V. All rights reserved.

  19. Detección de incendios en México utilizando imágenes AVHRR (temporada 1998

    Directory of Open Access Journals (Sweden)

    José Luis Palacio-Prieto

    1999-01-01

    Full Text Available The 1998 "burning" season in Mexico was outstanding. Hurricanes, low temperatures and unexpected snowfall contributed to the disposal of large quantities of fuelgrass, shrub and wood. Based on the processing of channel 3. 120 AVHRR images from January to June 1998, an evaluation of burned areas is presented. Up to 8 147 pixels assuming the presence of fire were recorded. In order to check accuracy of band 3 derived data, 3 312 sites corresponding to fires were crossed to fires estimated from imagery. About 94% of accuracy was assessed for the map presented here.

  20. High-resolution AFM structure of DNA G-wires in aqueous solution.

    Science.gov (United States)

    Bose, Krishnashish; Lech, Christopher J; Heddi, Brahim; Phan, Anh Tuân

    2018-05-17

    We investigate the self-assembly of short pieces of the Tetrahymena telomeric DNA sequence d[G 4 T 2 G 4 ] in physiologically relevant aqueous solution using atomic force microscopy (AFM). Wire-like structures (G-wires) of 3.0 nm height with well-defined surface periodic features were observed. Analysis of high-resolution AFM images allowed their classification based on the periodicity of these features. A major species is identified with periodic features of 4.3 nm displaying left-handed ridges or zigzag features on the molecular surface. A minor species shows primarily left-handed periodic features of 2.2 nm. In addition to 4.3 and 2.2 nm ridges, background features with periodicity of 0.9 nm are also observed. Using molecular modeling and simulation, we identify a molecular structure that can explain both the periodicity and handedness of the major G-wire species. Our results demonstrate the potential structural diversity of G-wire formation and provide valuable insight into the structure of higher-order intermolecular G-quadruplexes. Our results also demonstrate how AFM can be combined with simulation to gain insight into biomolecular structure.

  1. Electrical characterisation of semiconductor structures using AFM techniques

    International Nuclear Information System (INIS)

    Kovac jr, J.; Kovac, J.; Hotovy, J.; Novotny, I.; Skriniarova, J.; Dutkova, E.; Balaz, P.

    2011-01-01

    The microscopic dimensions appear to be a fundamental limitation to many common measurement techniques. The use of Current-Atomic Force Microscopy (I-AFM) bids a possibility to acquire topography image along with the current flow mappings which can be lapped over in resulting image as presented in this paper. A current distribution on the ZnO surface of p-Si/n- ZnO diode structure with CdS or ZnS nanocrystalline quantum dot clusters at the interface has been measured. The resulting images show a conductivity mapping different from topography what induces a conductive channels at the edges of the ZnO grains. We have successfully used I-AFM method where conductive AFM tip is scanning over the surface of the sample to create a topography image along with a current flow mapping of p-Si substrate covered with CdS or ZnS nanocrystalline clusters overlapped by 100 nm thick n-ZnO layer. The measured current mappings of both samples revealed a formation of conductive channels between the clusters of quantum dots when the sample is forward biased. We are able to create 3D topography images of combined with the forward biased current mapping textures which gives complex information about local conductivity and using this method it should be possible to find hidden current leaks in the samples for example defects in most semiconductor materials. A drift current generated in p-n junction was recorded when the sample was reverse biased while the sample has been exposed to light. Possible UV light source should cause a higher reverse current due to high bandgap of ZnS clusters which is a motivation to further research. The devices fabricated from these structures have the potential applications for solar cells or broadband photodetectors. (authors)

  2. PHYSICAL CONTACT BETWEEN THE +20 km s{sup −1} CLOUD AND THE GALACTIC CIRCUMNUCLEAR DISK

    Energy Technology Data Exchange (ETDEWEB)

    Takekawa, Shunya; Oka, Tomoharu [School of Fundamental Science and Technology, Graduate School of Science and Technology, Keio University, 3-14-1 Hiyoshi, Yokohama, Kanagawa 223-8522 (Japan); Tanaka, Kunihiko, E-mail: shunya@aysheaia.phys.keio.ac.jp [Department of Physics, Institute of Science and Technology, Keio University, 3-14-1 Hiyoshi, Yokohama, Kanagawa 223-8522 (Japan)

    2017-01-10

    This paper reports the discovery of evidence for physical contact between the Galactic circumnuclear disk (CND) and an exterior giant molecular cloud. The central 10 pc of our Galaxy has been imaged in the HCN J  = 1–0, HCO{sup +} J  = 1–0, CS J  = 2–1, H{sup 13}CN J  = 1–0, SiO J  = 2–1, SO N{sub J}  = 2{sub 3}–1{sub 2}, and HC{sub 3}N J  = 11–10 lines using the Nobeyama Radio Observatory 45 m radio telescope. Based on our examination of the position–velocity maps of several high-density probe lines, we have found that an emission “bridge” may be connecting the +20 km s{sup −1} cloud (M–0.13–0.08) and the negative-longitude extension of the CND. Analyses of line intensity ratios imply that the chemical property of the bridge is located between the +20 km s{sup −1} cloud and the CND. We introduce a new interpretation that a part of the CND may be colliding with the 20 km s{sup −1} cloud and the collision may be responsible for the formation of the bridge. Such collisional events could promote mass accretion onto the CND or into the inner ionized cavity, which may be further tested by proper motion studies.

  3. Metrological AFMs and its application for versatile nano-dimensional metrology tasks

    Science.gov (United States)

    Dai, Gaoliang; Dziomba, T.; Pohlenz, F.; Danzebrink, H.-U.; Koenders, L.

    2010-08-01

    Traceable calibrations of various micro and nano measurement devices are crucial tasks for ensuring reliable measurements for micro and nanotechnology. Today metrological AFM are widely used for traceable calibrations of nano dimensional standards. In this paper, we introduced the developments of metrological force microscopes at PTB. Of the three metrological AFMs described here, one is capable of measuring in a volume of 25 mm x 25 mm x 5 mm. All instruments feature interferometers and the three-dimensional position measurements are thus directly traceable to the metre definition. Some calibration examples on, for instance, flatness standards, step height standards, one and two dimensional gratings are demonstrated.

  4. Vacuolar structures can be identified by AFM elasticity mapping

    International Nuclear Information System (INIS)

    Riethmueller, Christoph; Schaeffer, Tilman E.; Kienberger, Ferry; Stracke, Werner; Oberleithner, Hans

    2007-01-01

    Fluid-filled organelles like vesicles, endosomes and pinosomes are inevitable parts of cellular signalling and transport. Endothelial cells, building a barrier between blood and tissue, can form vacuolar organelles. These structures are implicated in upregulated fluid transport across the endothelium under inflammatory conditions. Vacuolar organelles have been described by transmission electron microscopy so far. Here, we present a method that images and mechanically characterizes intracellular structures in whole cells by atomic force microscopy (AFM). After crosslinking the cellular proteins with the fixative glutaraldehyde, plasma membrane depressions become observable, which are scattered around the cell nucleus. Nanomechanical analysis identifies them as spots of reduced stiffness. Scanning electron microscopy confirms their pit-like appearance. In addition, fluorescence microscopy detects an analogous pattern of protein-poor spots, thereby confirming mechanical rigidity to arise from crosslinked proteins. This AFM application opens up a mechanical dimension for the investigation of intracellular organelles

  5. Fast and accurate: high-speed metrological large-range AFM for surface and nanometrology

    Science.gov (United States)

    Dai, Gaoliang; Koenders, Ludger; Fluegge, Jens; Hemmleb, Matthias

    2018-05-01

    Low measurement speed remains a major shortcoming of the scanning probe microscopic technique. It not only leads to a low measurement throughput, but a significant measurement drift over the long measurement time needed (up to hours or even days). To overcome this challenge, PTB, the national metrology institute of Germany, has developed a high-speed metrological large-range atomic force microscope (HS Met. LR-AFM) capable of measuring speeds up to 1 mm s‑1. This paper has introduced the design concept in detail. After modelling scanning probe microscopic measurements, our results suggest that the signal spectrum of the surface to be measured is the spatial spectrum of the surface scaled by the scanning speed. The higher the scanning speed , the broader the spectrum to be measured. To realise an accurate HS Met. LR-AFM, our solution is to combine different stages/sensors synchronously in measurements, which provide a much larger spectrum area for high-speed measurement capability. Two application examples have been demonstrated. The first is a new concept called reference areal surface metrology. Using the developed HS Met. LR-AFM, surfaces are measured accurately and traceably at a speed of 500 µm s‑1 and the results are applied as a reference 3D data map of the surfaces. By correlating the reference 3D data sets and 3D data sets of tools under calibration, which are measured at the same surface, it has the potential to comprehensively characterise the tools, for instance, the spectrum properties of the tools. The investigation results of two commercial confocal microscopes are demonstrated, indicating very promising results. The second example is the calibration of a kind of 3D nano standard, which has spatially distributed landmarks, i.e. special unique features defined by 3D-coordinates. Experimental investigations confirmed that the calibration accuracy is maintained at a measurement speed of 100 µm s‑1, which improves the calibration efficiency by a

  6. Structural analysis of radiation-induced chromosome aberrations by atomic force microscope (AFM) before and after Giemsa staining

    International Nuclear Information System (INIS)

    Murakami, M.; Kanda, R.; Minamihisamatsu, M.; Hayata, I.

    2003-01-01

    Full text: We have studied structures of chromosome aberration induced by ionizing radiation by an atomic force microscope (AFM). The AFM could visualize the fine structure of chromosomes on Giemsa stained or unstained samples, although it was difficult to visualize unstained chromosomes by light microscope. The height data of chromosomes obtained by AFM provided useful information to describe detailed structure of chromatid gaps induced by heavy ion irradiation. A fibrous structure was observed on the unstained chromosome and these structures were considered to be the 30nm fibers on the chromosome. These types of structures were observed in the gaps as well as on surface of the chromosome. Further more, other types of chromosome aberration induced by ionizing radiation visualized by AFM will be presented

  7. Nanomechanical probing of soft matter through hydrophobic AFM tips fabricated by two-photon polymerization

    International Nuclear Information System (INIS)

    Suriano, Raffaella; De Marco, Carmela; Turri, Stefano; Zandrini, Tommaso; Osellame, Roberto; Bragheri, Francesca

    2016-01-01

    Atomic force microscopy (AFM) nanoindentation of soft materials is a powerful tool for probing mechanical properties of biomaterials. Though many results have been reported in this field over the last decade, adhesion forces between the tip and the sample hinder the elastic modulus measurement when hydrophilic soft samples are investigated. Here, two-photon polymerization (2PP) technology was used to fabricate hydrophobic perfluoropolyether-based AFM tips. The hydrophobic 2PP tips allowed us to overcome the limitations of commercial and functionalized tips as well as to successfully measure the elastic modulus of medically relevant soft materials in air. Our results obtained in the characterization of poly(dimethyl siloxane) and polyethylene glycol hydrogels showed lower adhesion forces over a larger measurement range when compared to measurements performed with commercial tips. The elastic moduli measured by means of hydrophobic 2PP AFM tips were also found to be comparable to those obtained using conventional techniques for macroscopic samples. We successfully showed that the hydrophobic AFM tips developed by this highly versatile technology enable the study of mechanical properties of soft matter, benefiting from reduced sample–tip interactions, and a custom-made shape and dimension of the tips. (paper)

  8. Spatio-temporal interpolation of daily temperatures for global land areas at 1 km resolution

    NARCIS (Netherlands)

    Kilibarda, M.; Hengl, T.; Heuvelink, G.B.M.; Graler, B.; Pebesma, E.; Tadic, M.P.; Bajat, B.

    2014-01-01

    Combined Global Surface Summary of Day and European Climate Assessment and Dataset daily meteorological data sets (around 9000 stations) were used to build spatio-temporal geostatistical models and predict daily air temperature at ground resolution of 1km for the global land mass. Predictions in

  9. 1km Global Terrestrial Carbon Flux: Estimations and Evaluations

    Science.gov (United States)

    Murakami, K.; Sasai, T.; Kato, S.; Saito, M.; Matsunaga, T.; Hiraki, K.; Maksyutov, S. S.

    2017-12-01

    Estimating global scale of the terrestrial carbon flux change with high accuracy and high resolution is important to understand global environmental changes. Furthermore the estimations of the global spatiotemporal distribution may contribute to the political and social activities such as REDD+. In order to reveal the current state of terrestrial carbon fluxes covering all over the world and a decadal scale. The satellite-based diagnostic biosphere model is suitable for achieving this purpose owing to observing on the present global land surface condition uniformly at some time interval. In this study, we estimated the global terrestrial carbon fluxes with 1km grids by using the terrestrial biosphere model (BEAMS). And we evaluated our new carbon flux estimations on various spatial scales and showed the transition of forest carbon stocks in some regions. Because BEAMS required high resolution meteorological data and satellite data as input data, we made 1km interpolated data using a kriging method. The data used in this study were JRA-55, GPCP, GOSAT L4B atmospheric CO2 data as meteorological data, and MODIS land product as land surface satellite data. Interpolating process was performed on the meteorological data because of insufficient resolution, but not on MODIS data. We evaluated our new carbon flux estimations using the flux tower measurement (FLUXNET2015 Datasets) in a point scale. We used 166 sites data for evaluating our model results. These flux sites are classified following vegetation type (DBF, EBF, ENF, mixed forests, grass lands, croplands, shrub lands, Savannas, wetlands). In global scale, the BEAMS estimations was underestimated compared to the flux measurements in the case of carbon uptake and release. The monthly variations of NEP showed relatively high correlations in DBF and mixed forests, but the correlation coefficients of EBF, ENF, and grass lands were less than 0.5. In the meteorological factors, air temperature and solar radiation showed

  10. High Throughput Nanofabrication of Silicon Nanowire and Carbon Nanotube Tips on AFM Probes by Stencil-Deposited Catalysts

    DEFF Research Database (Denmark)

    Engstrøm, Daniel Southcott; Savu, Veronica; Zhu, Xueni

    2011-01-01

    scale nanostencil lithography. Individual vertical SiNWs were grown epitaxially by a catalytic vapor−liquid−solid (VLS) process and MWNTs were grown by a plasma-enhanced chemical vapor (PECVD) process on the AFM probes. The AFM probes were tested for imaging micrometers-deep trenches, where...... they demonstrated a significantly better performance than commercial high aspect ratio tips. Our method demonstrates a reliable and cost-efficient route toward wafer scale manufacturing of SiNW and MWNT AFM probes....

  11. Refining the statistical model for quantitative immunostaining of surface-functionalized nanoparticles by AFM.

    Science.gov (United States)

    MacCuspie, Robert I; Gorka, Danielle E

    2013-10-01

    Recently, an atomic force microscopy (AFM)-based approach for quantifying the number of biological molecules conjugated to a nanoparticle surface at low number densities was reported. The number of target molecules conjugated to the analyte nanoparticle can be determined with single nanoparticle fidelity using antibody-mediated self-assembly to decorate the analyte nanoparticles with probe nanoparticles (i.e., quantitative immunostaining). This work refines the statistical models used to quantitatively interpret the observations when AFM is used to image the resulting structures. The refinements add terms to the previous statistical models to account for the physical sizes of the analyte nanoparticles, conjugated molecules, antibodies, and probe nanoparticles. Thus, a more physically realistic statistical computation can be implemented for a given sample of known qualitative composition, using the software scripts provided. Example AFM data sets, using horseradish peroxidase conjugated to gold nanoparticles, are presented to illustrate how to implement this method successfully.

  12. THE 300 km s–1 STELLAR STREAM NEAR SEGUE 1: INSIGHTS FROM HIGH-RESOLUTION SPECTROSCOPY OF ITS BRIGHTEST STAR

    International Nuclear Information System (INIS)

    Frebel, Anna; Casey, Andrew R.; Lunnan, Ragnhild; Norris, John E.; Wyse, Rosemary F. G.; Gilmore, Gerard

    2013-01-01

    We present a chemical abundance analysis of 300S-1, the brightest likely member star of the 300 km s –1 stream near the faint satellite galaxy Segue 1. From a high-resolution Magellan/MIKE spectrum, we determine a metallicity of [Fe/H] = –1.46 ± 0.05 ± 0.23 (random and systematic uncertainties) for star 300S-1, and find an abundance pattern similar to typical halo stars at this metallicity. Comparing our stellar parameters to theoretical isochrones, we estimate a distance of 18 ± 7 kpc. Both the metallicity and distance estimates are in good agreement with what can be inferred from comparing the Sloan Digital Sky Survey photometric data of the stream stars to globular cluster sequences. While several other structures overlap with the stream in this part of the sky, the combination of kinematic, chemical, and distance information makes it unlikely that these stars are associated with either the Segue 1 galaxy, the Sagittarius Stream, or the Orphan Stream. Streams with halo-like abundance signatures, such as the 300 km s –1 stream, present another observational piece for understanding the accretion history of the Galactic halo.

  13. Evaluating the Consistency of the 1982–1999 NDVI Trends in the Iberian Peninsula across Four Time-series Derived from the AVHRR Sensor: LTDR, GIMMS, FASIR, and PAL-II

    Science.gov (United States)

    Alcaraz-Segura, Domingo; Liras, Elisa; Tabik, Siham; Paruelo, José; Cabello, Javier

    2010-01-01

    Successive efforts have processed the Advanced Very High Resolution Radiometer (AVHRR) sensor archive to produce Normalized Difference Vegetation Index (NDVI) datasets (i.e., PAL, FASIR, GIMMS, and LTDR) under different corrections and processing schemes. Since NDVI datasets are used to evaluate carbon gains, differences among them may affect nations’ carbon budgets in meeting international targets (such as the Kyoto Protocol). This study addresses the consistency across AVHRR NDVI datasets in the Iberian Peninsula (Spain and Portugal) by evaluating whether their 1982–1999 NDVI trends show similar spatial patterns. Significant trends were calculated with the seasonal Mann-Kendall trend test and their spatial consistency with partial Mantel tests. Over 23% of the Peninsula (N, E, and central mountain ranges) showed positive and significant NDVI trends across the four datasets and an additional 18% across three datasets. In 20% of Iberia (SW quadrant), the four datasets exhibited an absence of significant trends and an additional 22% across three datasets. Significant NDVI decreases were scarce (croplands in the Guadalquivir and Segura basins, La Mancha plains, and Valencia). Spatial consistency of significant trends across at least three datasets was observed in 83% of the Peninsula, but it decreased to 47% when comparing across the four datasets. FASIR, PAL, and LTDR were the most spatially similar datasets, while GIMMS was the most different. The different performance of each AVHRR dataset to detect significant NDVI trends (e.g., LTDR detected greater significant trends (both positive and negative) and in 32% more pixels than GIMMS) has great implications to evaluate carbon budgets. The lack of spatial consistency across NDVI datasets derived from the same AVHRR sensor archive, makes it advisable to evaluate carbon gains trends using several satellite datasets and, whether possible, independent/additional data sources to contrast. PMID:22205868

  14. Evaluation of defect density by top-view large scale AFM on metamorphic structures grown by MOVPE

    Energy Technology Data Exchange (ETDEWEB)

    Gocalinska, Agnieszka, E-mail: agnieszka.gocalinska@tyndall.ie; Manganaro, Marina; Dimastrodonato, Valeria; Pelucchi, Emanuele

    2015-09-15

    Highlights: • Metamorphic buffer layers of In{sub x}Ga{sub 1−x}As were grown by MOVPE and characterised by AFM and TEM. • It was found that AFM provides sufficient information to estimate threading defect density in metamorphic structures, even when significant roughness is present. • When planar-view TEM is lacking, a combination of cross-sectional TEM and large scale AFM can provide good evaluation of the material quality. • It is fast, cheap and non-destructive – can be very useful in development process of complicated structures, requiring multiple test growths and characterisation. - Abstract: We demonstrate an atomic force microscopy based method for estimation of defect density by identification of threading dislocations on a non-flat surface resulting from metamorphic growth. The discussed technique can be applied as an everyday evaluation tool for the quality of epitaxial structures and allow for cost reduction, as it lessens the amount of the transmission electron microscopy analysis required at the early stages of projects. Metamorphic structures with low surface defectivities (below 10{sup 6}) were developed successfully with the application of the technique, proving its usefulness in process optimisation.

  15. Spin Dynamics and Quantum Tunneling in Fe8 Nanomagnet and in AFM Rings by NMR

    International Nuclear Information System (INIS)

    Seung-Ho-Baek

    2004-01-01

    In this thesis, our main interest has been to investigate the spin dynamics and quantum tunneling in single molecule magnets (SMMs), For this we have selected two different classes of SMMs: a ferrimagnetic total high spin S = 10 cluster Fe8 and antiferromagnetic (AFM) ring-type clusters. For Fe8, our efforts have been devoted to the investigation of the quantum tunneling of magnetization in the very low temperature region. The most remarkable experimental finding in Fe8 is that the nuclear spin-lattice relaxation rate (1/T l ) at low temperatures takes place via strong collision mechanism, and thus it allows to measure directly the tunneling rate vs T and H for the first time. For AFM rings, we have shown that 1/T l probes the thermal fluctuations of the magnetization in the intermediate temperature range. We find that the fluctuations are dominated by a single characteristic frequency which has a power law T-dependence indicative of fluctuations due to electron-acoustic phonon interactions

  16. AFM topographies of densely packed nanoparticles: a quick way to determine the lateral size distribution by autocorrelation function analysis

    International Nuclear Information System (INIS)

    Fekete, L.; Kůsová, K.; Petrák, V.; Kratochvílová, I.

    2012-01-01

    The distribution of sizes is one of the basic characteristics of nanoparticles. Here, we propose a novel way to determine the lateral distribution of sizes from AFM topographies. Our algorithm is based on the autocorrelation function and can be applied both on topographies containing spatially separated and densely packed nanoparticles as well as on topographies of polycrystalline films. As no manual treatment is required, this algorithm can be easily automatable for batch processing. The algorithm works in principle with any kind of spatially mapped information (AFM current maps, optical microscope images, etc.), and as such has no size limitations. However, in the case of AFM topographies, the tip/sample convolution effects will be the factor limiting the smallest size to which the algorithm is applicable. Here, we demonstrate the usefulness of this algorithm on objects with sizes ranging between 20 nm and 1.5 μm.

  17. Quantitative numerical method for analysing slip traces observed by AFM

    International Nuclear Information System (INIS)

    Veselý, J; Cieslar, M; Coupeau, C; Bonneville, J

    2013-01-01

    Atomic force microscopy (AFM) is used more and more routinely to study, at the nanometre scale, the slip traces produced on the surface of deformed crystalline materials. Taking full advantage of the quantitative height data of the slip traces, which can be extracted from these observations, requires however an adequate and robust processing of the images. In this paper an original method is presented, which allows the fitting of AFM scan-lines with a specific parameterized step function without any averaging treatment of the original data. This yields a quantitative and full description of the changes in step shape along the slip trace. The strength of the proposed method is established on several typical examples met in plasticity by analysing nano-scale structures formed on the sample surface by emerging dislocations. (paper)

  18. Ultra-high aspect ratio replaceable AFM tips using deformation-suppressed focused ion beam milling

    International Nuclear Information System (INIS)

    Savenko, Alexey; Yildiz, Izzet; Petersen, Dirch Hjorth; Bøggild, Peter; Bartenwerfer, Malte; Krohs, Florian; Oliva, Maria; Harzendorf, Torsten

    2013-01-01

    Fabrication of ultra-high aspect ratio exchangeable and customizable tips for atomic force microscopy (AFM) using lateral focused ion beam (FIB) milling is presented. While on-axis FIB milling does allow high aspect ratio (HAR) AFM tips to be defined, lateral milling gives far better flexibility in terms of defining the shape and size of the tip. Due to beam-induced deformation, it has so far not been possible to define HAR structures using lateral FIB milling. In this work we obtain aspect ratios of up to 45, with tip diameters down to 9 nm, by a deformation-suppressing writing strategy. Several FIB milling strategies for obtaining sharper tips are discussed. Finally, assembly of the HAR tips on a custom-designed probe as well as the first AFM scanning is shown. (paper)

  19. AFM lateral force calibration for an integrated probe using a calibration grating

    International Nuclear Information System (INIS)

    Wang, Huabin; Gee, Michelle L.

    2014-01-01

    Atomic force microscopy (AFM) friction measurements on hard and soft materials remain a challenge due to the difficulties associated with accurately calibrating the cantilever for lateral force measurement. One of the most widely accepted lateral force calibration methods is the wedge method. This method is often used in a simplified format but in so doing sacrifices accuracy. In the present work, we have further developed the wedge method to provide a lateral force calibration method for integrated AFM probes that is easy to use without compromising accuracy and reliability. Raw friction calibration data are collected from a single scan image by continuous ramping of the set point as the facets of a standard grating are scanned. These data are analysed to yield an accurate lateral force conversion/calibration factor that is not influenced by adhesion forces or load deviation. By demonstrating this new calibration method, we illustrate its reliability, speed and ease of execution. This method makes accessible reliable boundary lubrication studies on adhesive and heterogeneous surfaces that require spatial resolution of frictional forces. - Highlights: • We develop a simple and accurate method for lateral force calibration in AFM friction measurements. • We detail the basis of the method and illustrate how to use it and its reliability with example data. • Our method is easy, accurate and accounts for the affects of adhesion on friction measurements. • The method is applicable to integrated probes, as opposed to colloidal probes. • This allows accurate AFM friction measurements on spatially heterogeneous and adhesive surfaces

  20. Temperature-Controlled High-Speed AFM: Real-Time Observation of Ripple Phase Transitions.

    Science.gov (United States)

    Takahashi, Hirohide; Miyagi, Atsushi; Redondo-Morata, Lorena; Scheuring, Simon

    2016-11-01

    With nanometer lateral and Angstrom vertical resolution, atomic force microscopy (AFM) has contributed unique data improving the understanding of lipid bilayers. Lipid bilayers are found in several different temperature-dependent states, termed phases; the main phases are solid and fluid phases. The transition temperature between solid and fluid phases is lipid composition specific. Under certain conditions some lipid bilayers adopt a so-called ripple phase, a structure where solid and fluid phase domains alternate with constant periodicity. Because of its narrow regime of existence and heterogeneity ripple phase and its transition dynamics remain poorly understood. Here, a temperature control device to high-speed atomic force microscopy (HS-AFM) to observe dynamics of phase transition from ripple phase to fluid phase reversibly in real time is developed and integrated. Based on HS-AFM imaging, the phase transition processes from ripple phase to fluid phase and from ripple phase to metastable ripple phase to fluid phase could be reversibly, phenomenologically, and quantitatively studied. The results here show phase transition hysteresis in fast cooling and heating processes, while both melting and condensation occur at 24.15 °C in quasi-steady state situation. A second metastable ripple phase with larger periodicity is formed at the ripple phase to fluid phase transition when the buffer contains Ca 2+ . The presented temperature-controlled HS-AFM is a new unique experimental system to observe dynamics of temperature-sensitive processes at the nanoscopic level. © 2016 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim.

  1. Direct AFM observation of an opening event of a DNA cuboid constructed via a prism structure.

    Science.gov (United States)

    Endo, Masayuki; Hidaka, Kumi; Sugiyama, Hiroshi

    2011-04-07

    A cuboid structure was constructed using a DNA origami design based on a square prism structure. The structure was characterized by atomic force microscopy (AFM) and dynamic light scattering. The real-time opening event of the cuboid was directly observed by high-speed AFM.

  2. AFM of metallic nano-particles and nano-structures in heavily irradiated NaCl

    OpenAIRE

    Gaynutdinov, R; Vainshtein, DI; Hak, SJ; Tolstikhina, A; Den Hartog, HW

    2003-01-01

    AFM investigations are reported for heavily, electron irradiated NaCl crystals in ultra high vacuum (UHV) in the non-contact mode-with an UHV AFM/STM Omicron system. To avoid chemical reactions between the radiolytic Na and oxygen and water, the irradiated samples were cleaved and prepared for the experiments in UHV At the surface of freshly cleaved samples, we have observed sodium nano-precipitates with shapes, which depend on the irradiation dose and the volume fraction of the radiolytic Na...

  3. High precision attachment of silver nanoparticles on AFM tips by dielectrophoresis.

    Science.gov (United States)

    Leiterer, Christian; Wünsche, Erik; Singh, Prabha; Albert, Jens; Köhler, Johann M; Deckert, Volker; Fritzsche, Wolfgang

    2016-05-01

    AFM tips are modified with silver nanoparticles using an AC electrical field. The used technique works with sub-micron precision and also does not require chemical modification of the tip. Based on the electrical parameters applied in the process, particle density and particle position on the apex of the tip can be adjusted. The feasibility of the method is proven by subsequent tip-enhanced Raman spectroscopy (TERS) measurements using the fabricated tips as a measurement probe. Since this modification process itself does not require any lithographic processing, the technique can be easily adapted to modify AFM tips with a variety of nanostructures with pre-defined properties, while being parallelizable for a potential commercial application.

  4. Structural characterization of Fe/Ag bilayers by RBS and AFM

    International Nuclear Information System (INIS)

    Tunyogi, A.; Tancziko, F.; Osvath, Z.; Paszti, F.

    2008-01-01

    Fe/Ag thin films are intensively investigated due to their special magnetic properties. Recently a deposition-order dependent asymmetric interface has been found. When iron is grown on silver, the interface is sharp, while the growth of Ag on Fe results in a long, low-energy tail of the Ag peak in the Rutherford backscattering spectrometry (RBS) spectra. The main purpose of this paper is to show that the low-energy Ag tail is caused by grain boundary diffusion, and that, when elevating the growing temperature of the Ag layer this effect becomes more significant. Two sets of polycrystalline and epitaxial Fe/Ag bilayers were prepared simultaneously onto Si(1 1 1) and MgO(1 0 0), respectively. The iron layers were grown at 250 deg. C and annealed at 450 deg. C in both sets, while the Ag layer was grown in the first set at room temperature (RT) and in the second set at 250 deg. C (HT). The sample composition, the interface sharpness and the quality of the epitaxy were studied by Rutherford backscattering spectrometry (RBS) combined with channeling effect. The surface morphology was determined by atomic force microscopy (AFM). RBS spectra show that in the case of RT samples the epitaxial MgO/Fe/Ag bilayer has sharp, well-defined interface, while for the polycrystalline Si/Fe/Ag sample the silver peak has a low-energy tail. Both the Fe and Ag peaks smeared out in the case of HT samples. AFM-images show that the RT samples have a continuous Ag layer, while the HT samples have fragmented surfaces. The RBS spectra taken on the HT samples were successfully simulated by the RBS-MAST code taking into account their fragmented structures.

  5. The 5- or 10-km Marikenloop Run: A Prospective Study of the Etiology of Running-Related Injuries in Women.

    Science.gov (United States)

    van der Worp, Maarten P; de Wijer, Anton; van Cingel, Robert; Verbeek, André L M; Nijhuis-van der Sanden, Maria W G; Staal, J Bart

    2016-06-01

    Study Design Prospective cohort. Background The popularity of running events is still growing, particularly among women; however, little is known about the risk factors for running-related injuries in female runners. Objectives The aims of this study were to determine the incidence and characteristics (site and recurrence) of running-related injuries and to identify specific risk factors for running-related injuries among female runners training for a 5- or 10-km race. Methods Four hundred thirty-five women registered for the Marikenloop run of 5 or 10 km were recruited. Follow-up data were collected over 12 weeks using questionnaires, starting 8 weeks before the event and ending 4 weeks after the event. Two orthopaedic tests (navicular drop test and extension of the first metatarsophalangeal joint) were performed in the 8 weeks before the event. Running-related injuries, defined as running-related pain of the lower back and/or the lower extremity that restricted running for at least 1 day, were assessed at 1-, 2-, and 3-month follow-ups. Results Of 417 female runners with follow-up data (96%), 93 runners (22.3%) reported 109 running-related injuries, mainly of the hip/groin, knee, and lower leg. Multivariable Cox regression analysis showed that a weekly training distance of more than 30 km (hazard ratio = 3.28; 95% confidence interval [CI]: 1.23, 8.75) and a previous running injury longer than 12 months prior (hazard ratio = 1.88; 95% CI: 1.03, 3.45) were associated with the occurrence of running-related injuries. Conclusion Hip/groin, knee, and lower-leg injuries were common among female runners. Only weekly training distance (greater than 30 km) and previous running injury (greater than 12 months prior) were associated with running-related injuries in female runners training for a 5- or 10-km event. Level of Evidence Etiology, 2b. J Orthop Sports Phys Ther 2016;46(6):462-470. Epub 26 Apr 2016. doi:10.2519/jospt.2016.6402.

  6. Custom AFM for X-ray beamlines: in situ biological investigations under physiological conditions

    Energy Technology Data Exchange (ETDEWEB)

    Gumí-Audenis, B. [ESRF, The European Synchrotron, Grenoble (France); Institute for Bioengineering of Catalonia (IBEC), Barcelona (Spain); Physical Chemistry Department, Universitat de Barcelona, Barcelona (Spain); Networking Biomedical Research Center on Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Madrid (Spain); Carlà, F. [ESRF, The European Synchrotron, Grenoble (France); Vitorino, M. V. [University of Lisboa, Falculty of Science, Biosystems and Integrative Sciences Institute - BIOISI, Lisbon (Portugal); Panzarella, A. [ESRF, The European Synchrotron, Grenoble (France); Porcar, L. [Institut Laue-Langevin, Grenoble (France); Boilot, M. [ORTEC, Marseille (France); Guerber, S. [CEA, LETI Grenoble (France); Bernard, P. [ESRF, The European Synchrotron, Grenoble (France); Rodrigues, M. S. [University of Lisboa, Falculty of Science, Biosystems and Integrative Sciences Institute - BIOISI, Lisbon (Portugal); Sanz, F.; Giannotti, M. I. [Institute for Bioengineering of Catalonia (IBEC), Barcelona (Spain); Physical Chemistry Department, Universitat de Barcelona, Barcelona (Spain); Networking Biomedical Research Center on Bioengineering, Biomaterials and Nanomedicine (CIBER-BBN), Madrid (Spain); Costa, L., E-mail: luca.costa@esrf.fr [ESRF, The European Synchrotron, Grenoble (France)

    2015-09-30

    The performance of a custom atomic force microscope for grazing-incidence X-ray experiments on hydrated soft and biological samples is presented. A fast atomic force microscope (AFM) has been developed that can be installed as a sample holder for grazing-incidence X-ray experiments at solid/gas or solid/liquid interfaces. It allows a wide range of possible investigations, including soft and biological samples under physiological conditions (hydrated specimens). The structural information obtained using the X-rays is combined with the data gathered with the AFM (morphology and mechanical properties), providing a unique characterization of the specimen and its dynamics in situ during an experiment. In this work, lipid monolayers and bilayers in air or liquid environment have been investigated by means of AFM, both with imaging and force spectroscopy, and X-ray reflectivity. In addition, this combination allows the radiation damage induced by the beam on the sample to be studied, as has been observed on DOPC and DPPC supported lipid bilayers under physiological conditions.

  7. Direct comparison of AFM and SEM measurements on the same set of nanoparticles

    International Nuclear Information System (INIS)

    Delvallée, A; Feltin, N; Ducourtieux, S; Trabelsi, M; Hochepied, J F

    2015-01-01

    This article is the first step in the development of a hybrid metrology combining AFM and SEM techniques for measuring the dimensions of a nanoparticle population in 3D space (X,Y,Z). This method exploits the strengths of each technique on the same set of nanoparticles. AFM is used for measuring the nanoparticle height and the measurements along X and Y axes are deduced from SEM images. A sampling method is proposed in order to obtain the best deposition conditions of SiO 2 and gold nanoparticles on mica or silicon substrates. Only the isolated nanoparticles are taken into account in the histogram of size distribution. Moreover, a semi-automatic Matlab routine has also been developed to process the AFM and SEM images, measure and count the nanoparticles. This routine allows the user to exclusively select the isolated nanoparticles through a control interface. The measurements have been performed on spherical-like nanoparticles to test the method by comparing the results obtained with both techniques. (paper)

  8. Evaluation of Decision Trees for Cloud Detection from AVHRR Data

    Science.gov (United States)

    Shiffman, Smadar; Nemani, Ramakrishna

    2005-01-01

    Automated cloud detection and tracking is an important step in assessing changes in radiation budgets associated with global climate change via remote sensing. Data products based on satellite imagery are available to the scientific community for studying trends in the Earth's atmosphere. The data products include pixel-based cloud masks that assign cloud-cover classifications to pixels. Many cloud-mask algorithms have the form of decision trees. The decision trees employ sequential tests that scientists designed based on empirical astrophysics studies and simulations. Limitations of existing cloud masks restrict our ability to accurately track changes in cloud patterns over time. In a previous study we compared automatically learned decision trees to cloud masks included in Advanced Very High Resolution Radiometer (AVHRR) data products from the year 2000. In this paper we report the replication of the study for five-year data, and for a gold standard based on surface observations performed by scientists at weather stations in the British Islands. For our sample data, the accuracy of automatically learned decision trees was greater than the accuracy of the cloud masks p < 0.001.

  9. Surface electrical properties of stainless steel fibres: An AFM-based study

    International Nuclear Information System (INIS)

    Yin, Jun; D’Haese, Cécile; Nysten, Bernard

    2015-01-01

    Highlights: • Surface electrical conductivity of stainless steel fibre is measured and mapped by CS-AFM. • Surface potential of stainless steel fibre is measured and mapped by KPFM. • Surface electronic properties are governed by the chromium oxide passivation layer. • Electron tunnelling through the passivation layer is the dominant mechanisms for conduction. - Abstract: Atomic force microscopy (AFM) electrical modes were used to study the surface electrical properties of stainless steel fibres. The surface electrical conductivity was studied by current sensing AFM and I–V spectroscopy. Kelvin probe force microscopy was used to measure the surface contact potential. The oxide film, known as passivation layer, covering the fibre surface gives rise to the observation of an apparently semiconducting behaviour. The passivation layer generally exhibits a p-type semiconducting behaviour, which is attributed to the predominant formation of chromium oxide on the surface of the stainless steel fibres. At the nanoscale, different behaviours are observed from points to points, which may be attributed to local variations of the chemical composition and/or thickness of the passivation layer. I–V curves are well fitted with an electron tunnelling model, indicating that electron tunnelling may be the predominant mechanism for electron transport

  10. Time scales of pattern evolution from cross-spectrum analysis of advanced very high resolution radiometer and coastal zone color scanner imagery

    Science.gov (United States)

    Denman, Kenneth L.; Abbott, Mark R.

    1994-01-01

    We have selected square subareas (110 km on a side) from coastal zone color scanner (CZCS) and advanced very high resolution radiometer (AVHRR) images for 1981 in the California Current region off northern California for which we could identify sequences of cloud-free data over periods of days to weeks. We applied a two-dimensional fast Fourier transformation to images after median filtering, (x, y) plane removal, and cosine tapering. We formed autospectra and coherence spectra as functions of a scalar wavenumber. Coherence estimates between pairs of images were plotted against time separation between images for several wide wavenumber bands to provide a temporal lagged coherence function. The temporal rate of loss of correlation (decorrelation time scale) in surface patterns provides a measure of the rate of pattern change or evolution as a function of spatial dimension. We found that patterns evolved (or lost correlation) approximately twice as rapidly in upwelling jets as in the 'quieter' regions between jets. The rapid evolution of pigment patterns (lifetime of about 1 week or less for scales of 50-100 km) ought to hinder biomass transfer to zooplankton predators compared with phytoplankton patches that persist for longer times. We found no significant differences between the statistics of CZCS and AVHRR images (spectral shape or rate of decorrelation). In addition, in two of the three areas studied, the peak correlation between AVHRR and CZCS images from the same area occurred at zero lag, indicating that the patterns evolved simutaneously. In the third area, maximum coherence between thermal and pigment patterns occurred when pigment images lagged thermal images by 1-2 days, mirroring the expected lag of high pigment behind low temperatures (and high nutrients) in recently upwelled water. We conclude that in dynamic areas such as coastal upwelling systems, the phytoplankton cells (identified by pigment color patterns) behave largely as passive scalars at the

  11. Multifractural analysis of AFM images of Nb thin film surfaces

    International Nuclear Information System (INIS)

    Altajskij, M.V; Chernenko, L.P.; Balebanov, V.M.; Erokhin, N.S.; Moiseev, S.S.

    2000-01-01

    The multifractal analysis of the atomic Force Microscope (AFM) images of the Niobium (Nb) thin film surfaces has been performed. These Nb films are being used for the measurements of the London penetration depth of stationary magnetic field by polarized neutron reflectometry. The analysis shows the behavior of Renyi dimensions of images (in the range of available scales 6-2000 nm), like the known multifractal p-model, with typical Hausdorff dimension of prevalent color in the range of 1.6-1.9. This indicates the fractal nature of film landscape on those scales. The perspective of new mechanism of order parameter suppression on superconductor-vacuum boundary, manifested in anomalous magnetic field penetration in discussed

  12. Multi year changes of Aerosol Optical Depth in the monsoon region of the Indian Ocean since 1986 as seen in the AVHRR and TOMS data

    Directory of Open Access Journals (Sweden)

    J. P. George

    2008-02-01

    Full Text Available Aerosol Optical Depth (AOD data based on AVHRR and TOMS was analyzed to find out the changes in the Indian Ocean from 1981 to 2004. Four regions covering Indian Ocean north of 10° S were studied in detail. The results strongly suggest that the mean value of AOD in these regions decreased from 1986–1990 to 1995–1999. The Arabian Sea and Bay of Bengal show increase thereafter whereas in the equatorial part it decreased further, during 2000–2004. The drop in AOD from the first to second period is evident in AVHRR and TOMS in the case of the Arabian Sea (North West Indian Ocean. The decrease in this case is prominent in summer. These results in general agree with the recently reported global decrease in AOD, "global brightening" and also the reversal of trend in some of the anthropogenic emissions.

  13. Accurate Calibration and Uncertainty Estimation of the Normal Spring Constant of Various AFM Cantilevers

    Directory of Open Access Journals (Sweden)

    Yunpeng Song

    2015-03-01

    Full Text Available Measurement of force on a micro- or nano-Newton scale is important when exploring the mechanical properties of materials in the biophysics and nanomechanical fields. The atomic force microscope (AFM is widely used in microforce measurement. The cantilever probe works as an AFM force sensor, and the spring constant of the cantilever is of great significance to the accuracy of the measurement results. This paper presents a normal spring constant calibration method with the combined use of an electromagnetic balance and a homemade AFM head. When the cantilever presses the balance, its deflection is detected through an optical lever integrated in the AFM head. Meanwhile, the corresponding bending force is recorded by the balance. Then the spring constant can be simply calculated using Hooke’s law. During the calibration, a feedback loop is applied to control the deflection of the cantilever. Errors that may affect the stability of the cantilever could be compensated rapidly. Five types of commercial cantilevers with different shapes, stiffness, and operating modes were chosen to evaluate the performance of our system. Based on the uncertainty analysis, the expanded relative standard uncertainties of the normal spring constant of most measured cantilevers are believed to be better than 2%.

  14. Interactions between chitosan and cells measured by AFM

    Energy Technology Data Exchange (ETDEWEB)

    Hsiao, Sheng-Wen; Thien, Doan Van Hong; Ho, Ming-Hua [Department of Chemical Engineering, National Taiwan University of Science and Technology, Taipei 10617, Taiwan (China); Hsieh, Hsyue-Jen [Department of Chemical Engineering, National Taiwan University, Taipei 10617, Taiwan (China); Li, Chung-Hsing [Division of Orthodontics and Pediatric Dentistry, Department of Dentistry, Tri-Service General Hospital, Taipei, Taiwan (China); Hung, Chang-Hsiang [Department of Dentistry, Kinmen Hospital Department of Health, Taiwan (China); Li, Hsi-Hsin, E-mail: mhho@mail.ntust.edu.t [Deputy Superintendent, Kinmen Hospital Department of Health, Taiwan (China)

    2010-10-01

    Chitosan, a biocompatible material that has been widely used in bone tissue engineering, is believed to have a high affinity to osteoblastic cells. This research is the first to prove this hypothesis. By using atomic force microscopy (AFM) with a chitosan-modified cantilever, quantitative evaluation of the interforce between chitosan and cells was carried out. A chitosan tip functionalized with Arg-Gly-Asp (RGD) was also used to measure the interforce between RGD-chitosan and osteoblastic cells. This research concluded by examining cell adhesion and spreading of chitosan substrates as further characterization of the interactions between cells and chitosan. The force measured by AFM showed that the interforce between chitosan and osteoblasts was the highest (209 nN). The smallest adhesion force (61.8 nN) appeared between chitosan and muscle fibroblasts, which did not demonstrate any osteoblastic properties. This result proved that there was a significant interaction between chitosan and bone cells, and correlated with the observations of cell attachment and spreading. The technique developed in this research directly quantified the adhesion between chitosan and cells. This is the first study to demonstrate that specific interaction exists between chitosan and osteoblasts.

  15. Interactions between chitosan and cells measured by AFM

    International Nuclear Information System (INIS)

    Hsiao, Sheng-Wen; Thien, Doan Van Hong; Ho, Ming-Hua; Hsieh, Hsyue-Jen; Li, Chung-Hsing; Hung, Chang-Hsiang; Li, Hsi-Hsin

    2010-01-01

    Chitosan, a biocompatible material that has been widely used in bone tissue engineering, is believed to have a high affinity to osteoblastic cells. This research is the first to prove this hypothesis. By using atomic force microscopy (AFM) with a chitosan-modified cantilever, quantitative evaluation of the interforce between chitosan and cells was carried out. A chitosan tip functionalized with Arg-Gly-Asp (RGD) was also used to measure the interforce between RGD-chitosan and osteoblastic cells. This research concluded by examining cell adhesion and spreading of chitosan substrates as further characterization of the interactions between cells and chitosan. The force measured by AFM showed that the interforce between chitosan and osteoblasts was the highest (209 nN). The smallest adhesion force (61.8 nN) appeared between chitosan and muscle fibroblasts, which did not demonstrate any osteoblastic properties. This result proved that there was a significant interaction between chitosan and bone cells, and correlated with the observations of cell attachment and spreading. The technique developed in this research directly quantified the adhesion between chitosan and cells. This is the first study to demonstrate that specific interaction exists between chitosan and osteoblasts.

  16. Influence of the surface chemistry on the nanotribological behaviour of (AFM tip/graphite) couples

    International Nuclear Information System (INIS)

    Jradi, Khalil; Schmitt, Marjorie; Bistac, Sophie

    2012-01-01

    The development of the nanotechnology has made essential the knowledge of the tribological behaviour of carbonaceous materials, and more particularly of graphite. Atomic force microscopy (AFM) is thus used to study the friction properties at this nanoscopic scale. In this work, results concerning the friction of AFM tips against graphite pins are presented, with a particular emphasis on the effect of the chemical modification of these tips on the tribological behaviour of graphite.

  17. An improved in situ measurement of offset phase shift towards quantitative damping-measurement with AFM

    International Nuclear Information System (INIS)

    Minary-Jolandan, Majid; Yu Minfeng

    2008-01-01

    An improved approach is introduced in damping measurement with atomic force microscope (AFM) for the in situ measurement of the offset phase shift needed for determining the intrinsic mechanical damping in nanoscale materials. The offset phase shift is defined and measured at a point of zero contact force according to the deflection part of the AFM force plot. It is shown that such defined offset phase shift is independent of the type of sample material, varied from hard to relatively soft materials in this study. This improved approach allows the self-calibrated and quantitative damping measurement with AFM. The ability of dynamic mechanical analysis for the measurement of damping in isolated one-dimensional nanostructures, e.g. individual multiwalled carbon nanotubes, was demonstrated

  18. AFM Structural Characterization of Drinking Water Biofilm ...

    Science.gov (United States)

    Due to the complexity of mixed culture drinking water biofilm, direct visual observation under in situ conditions has been challenging. In this study, atomic force microscopy (AFM) revealed the three dimensional morphology and arrangement of drinking water relevant biofilm in air and aqueous solution. Operating parameters were optimized to improve imaging of structural details for a mature biofilm in liquid. By using a soft cantilever (0.03 N/m) and slow scan rate (0.5 Hz), biofilm and individual bacterial cell’s structural topography were resolved and continuously imaged in liquid without loss of spatial resolution or sample damage. The developed methodology will allow future in situ investigations to temporally monitor mixed culture drinking water biofilm structural changes during disinfection treatments. Due to the complexity of mixed culture drinking water biofilm, direct visual observation under in situ conditions has been challenging. In this study, atomic force microscopy (AFM) revealed the three dimensional morphology and arrangement of drinking water relevant biofilm in air and aqueous solution. Operating parameters were optimized to improve imaging of structural details for a mature biofilm in liquid. By using a soft cantilever (0.03 N/m) and slow scan rate (0.5 Hz), biofilm and individual bacterial cell’s structural topography were resolved and continuously imaged in liquid without loss of spatial resolution or sample damage. The developed methodo

  19. Fracture Growth Testing of Titanium 6AL-4V in AF-M315E

    Science.gov (United States)

    Sampson, Jeffrey W.; Martinez, Jonathan; McLean, Christopher

    2015-01-01

    The Green Propellant Infusion Mission (GPIM) will demonstrate the performance of AF-M315E monopropellant in orbit. Flight certification requires a safe-life analysis of the titanium alloy fuel tank to ensure inherent flaws will not cause failure during the design life. Material property inputs for this analysis require testing to determine the stress intensity factor for environmentally-assisted cracking (K (sub EAC)) of Ti 6Al-4V in combination with the AF-M315E monopropellant. Testing of single-edge notched specimens SE(B) representing the bulk tank membrane and weld material were performed in accordance with ASTM E1681. Specimens with fatigue pre-cracks were loaded into test fixtures so that the crack tips were exposed to the monopropellant at 50 degrees Centigrade for a duration of 1,000 hours. Specimens that did not fail during exposure were opened to inspect the crack surfaces for evidence of crack growth. The threshold stress intensity value, KEAC, is the highest applied stress intensity that produced neither a failure of the specimen during the exposure nor showed evidence of crack growth. The threshold stress intensity factor of the Ti 6Al-4V forged tank material when exposed to AF-M315E monopropellant was found to be at least 22.0 kilopounds per square inch. The stress intensity factor of the weld material was at least 31.3 kilopounds per square inch.

  20. Transport and activation of S-(1,2-dichlorovinyl)-L-cysteine and N-acetyl-S-(1,2-dichlorovinyl)-L-cysteine in rat kidney proximal tubules

    International Nuclear Information System (INIS)

    Zhang, G.H.; Stevens, J.L.

    1989-01-01

    An important step in understanding the mechanism underlying the tubular specificity of the nephrotoxicity of toxic cysteine conjugates is to identify the rate-limiting steps in their activation. The rate-limiting steps in the activation of toxic cysteine conjugates were characterized using isolated proximal tubules from the rat and 35S-labeled S-(1,2-dichlorovinyl)-L-cysteine (DCVC) and N-acetyl-S-(1,2-dichlorovinyl)-L-cysteine (NAC-DCVC) as model compounds. The accumulation by tubules of 35S radiolabel from both DCVC and NAC-DCVC was time and temperature dependent and was mediated by both Na+-dependent and independent processes. Kinetic studies with DCVC in the presence of sodium revealed the presence of two components with apparent Km and Vmax values of (1) 46 microM and 0.21 nmol/mg min and (2) 2080 microM and 7.3 nmol/mg.min. NAC-DVVC uptake was via a single system with apparent Km and Vmax values of 157 microM and 0.65 nmol/mg.min, respectively. Probenecid, an inhibitor of the renal organic anion transport system, inhibited accumulation of radiolabel from NAC-DCVC, but not from DCVC. The covalent binding of 35S label to cellular macromolecules was much greater from [35S]DCVC than from NAC-[35S]DCVC. Analysis of metabolites showed that a substantial amount of the cellular NAC-[35S]DCVC was unmetabolized while [35S]DCVC was rapidly metabolized to bound 35S-labeled material and unidentified products. The data suggest that DCVC is rapidly metabolized following transport, but that activation of NAC-DCVC depends on a slower rate of deacetylation. The results are discussed with regard to the segment specificity of cysteine conjugate toxicity and the role of disposition in vivo in the nephrotoxicity of glutathione conjugates

  1. A Survey on Aflatoxin M1 Content in Sheep and Goat Milk Produced in Sardinia Region, Italy (2005-2013).

    Science.gov (United States)

    Virdis, Salvatore; Scarano, Christian; Spanu, Vincenzo; Murittu, Gavino; Spanu, Carlo; Ibba, Ignazio; De Santis, Enrico Pietro Luigi

    2014-12-09

    In the present work the results of a survey conducted in Sardinia Region on Aflatoxin M 1 (AFM 1 ) contamination in milk of small ruminants from 2005 to 2013 are reported. A total of 517 sheep and 88 goat milk samples from bulk tank, tank trucks and silo tank milk were collected. Analyses were performed by the Regional Farmers Association laboratory using high-performance liquid chromatography following the ISO 14501:1998 standard. None of the sheep milk samples analysed during 2005-2012 showed AFM 1 contamination. In sheep milk samples collected in 2013, 8 out of 172 (4.6%) were contaminated by AFM 1 with a concentration (mean±SD) of 12.59±14.05 ng/L. In one bulk tank milk sample 58.82 ng/L AFM 1 was detected, exceeding the EU limit. In none of goat milk samples analysed from 2010 to 2012 AFM 1 was detected. In 2013, 9 out of 66 goat milk samples (13.6%) showed an AFM 1 concentration of 47.21±19.58 ng/L. Two of these samples exceeded the EU limit, with concentrations of 62.09 and 138.6 ng/L. Higher contamination frequency and concentration rates were detected in bulk tank milk samples collected at farm than in bulk milk truck or silo samples, showing a dilution effect on AFM 1 milk content along small ruminants supply chain. The rate and levels of AFM 1 contamination in sheep and goat milk samples were lower than other countries. However, the small number of milk samples analysed for AFM 1 in Sardinia Region in 2005-2013 give evidence that food business operators check programmes should be improved to ensure an adequate monitoring of AFM 1 contamination in small ruminant dairy chain.

  2. A survey on Aflatoxin M1 content in sheep and goat milk produced in Sardinia Region, Italy (2005-2013

    Directory of Open Access Journals (Sweden)

    Salvatore Virdis

    2014-12-01

    Full Text Available In the present work the results of a survey conducted in Sardinia Region on Aflatoxin M1 (AFM1 contamination in milk of small ruminants from 2005 to 2013 are reported. A total of 517 sheep and 88 goat milk samples from bulk tank, tank trucks and silo tank milk were collected. Analyses were performed by the Regional Farmers Association laboratory using high-performance liquid chromatography following the ISO 14501:1998 standard. None of the sheep milk samples analysed during 2005- 2012 showed AFM1 contamination. In sheep milk samples collected in 2013, 8 out of 172 (4.6% were contaminated by AFM1 with a concentration (mean±SD of 12.59±14.05 ng/L. In one bulk tank milk sample 58.82 ng/L AFM1 was detected, exceeding the EU limit. In none of goat milk samples analysed from 2010 to 2012 AFM1 was detected. In 2013, 9 out of 66 goat milk samples (13.6% showed an AFM1 concentration of 47.21±19.58 ng/L. Two of these samples exceeded the EU limit, with concentrations of 62.09 and 138.6 ng/L. Higher contamination frequency and concentration rates were detected in bulk tank milk samples collected at farm than in bulk milk truck or silo samples, showing a dilution effect on AFM1 milk content along small ruminants supply chain. The rate and levels of AFM1 contamination in sheep and goat milk samples were lower than other countries. However, the small number of milk samples analysed for AFM1 in Sardinia Region in 2005-2013 give evidence that food business operators check programmes should be improved to ensure an adequate monitoring of AFM1 contamination in small ruminant dairy chain.

  3. Capillary force on a tilted cylinder: Atomic Force Microscope (AFM) measurements.

    Science.gov (United States)

    Kosgodagan Acharige, Sébastien; Laurent, Justine; Steinberger, Audrey

    2017-11-01

    The capillary force in situations where the liquid meniscus is asymmetric, such as the one around a tilted object, has been hitherto barely investigated even though these situations are very common in practice. In particular, the capillary force exerted on a tilted object may depend on the dipping angle i. We investigate experimentally the capillary force that applies on a tilted cylinder as a function of its dipping angle i, using a home-built tilting Atomic Force Microscope (AFM) with custom made probes. A micrometric-size rod is glued at the end of an AFM cantilever of known stiffness, whose deflection is measured when the cylindrical probe is dipped in and retracted from reference liquids. We show that a torque correction is necessary to understand the measured deflection. We give the explicit expression of this correction as a function of the probes' geometrical parameters, so that its magnitude can be readily evaluated. The results are compatible with a vertical capillary force varying as 1/cosi, in agreement with a recent theoretical prediction. Finally, we discuss the accuracy of the method for measuring the surface tension times the cosine of the contact angle of the liquid on the probe. Copyright © 2017 Elsevier Inc. All rights reserved.

  4. Nano-Electrochemistry and Nano-Electrografting with an Original Combined AFM-SECM

    Directory of Open Access Journals (Sweden)

    Ammar Ben Brahim

    2013-05-01

    Full Text Available This study demonstrates the advantages of the combination between atomic force microscopy and scanning electrochemical microscopy. The combined technique can perform nano-electrochemical measurements onto agarose surface and nano-electrografting of non-conducting polymers onto conducting surfaces. This work was achieved by manufacturing an original Atomic Force Microscopy-Scanning ElectroChemical Microscopy (AFM-SECM electrode. The capabilities of the AFM-SECM-electrode were tested with the nano-electrografting of vinylic monomers initiated by aryl diazonium salts. Nano-electrochemical and technical processes were thoroughly described, so as to allow experiments reproducing. A plausible explanation of chemical and electrochemical mechanisms, leading to the nano-grafting process, was reported. This combined technique represents the first step towards improved nano-processes for the nano-electrografting.

  5. Accuracy optimization of high-speed AFM measurements using Design of Experiments

    DEFF Research Database (Denmark)

    Tosello, Guido; Marinello, F.; Hansen, Hans Nørgaard

    2010-01-01

    Atomic Force Microscopy (AFM) is being increasingly employed in industrial micro/nano manufacturing applications and integrated into production lines. In order to achieve reliable process and product control at high measuring speed, instrument optimization is needed. Quantitative AFM measurement...... results are influenced by a number of scan settings parameters, defining topography sampling and measurement time: resolution (number of profiles and points per profile), scan range and direction, scanning force and speed. Such parameters are influencing lateral and vertical accuracy and, eventually......, the estimated dimensions of measured features. The definition of scan settings is based on a comprehensive optimization that targets maximization of information from collected data and minimization of measurement uncertainty and scan time. The Design of Experiments (DOE) technique is proposed and applied...

  6. Controlled AFM manipulation of small nanoparticles and assembly of hybrid nanostructures

    International Nuclear Information System (INIS)

    Kim, Suenne; Shafiei, Farbod; Ratchford, Daniel; Li Xiaoqin

    2011-01-01

    We demonstrate controlled manipulation of semiconductor and metallic nanoparticles (NPs) with 5-15 nm diameters and assemble these NPs into hybrid structures. The manipulation is accomplished under ambient environment using a commercial atomic force microscope (AFM). There are particular difficulties associated with manipulating NPs this small. In addition to spatial drift, the shape of an asymmetric AFM tip has to be taken into account in order to understand the intended and actual manipulation results. Furthermore, small NPs often attach to the tip via electrostatic interaction and modify the effective tip shape. We suggest a method for detaching the NPs by performing a pseudo-manipulation step. Finally, we show by example the ability to assemble these small NPs into prototypical hybrid nanostructures with well-defined composition and geometry.

  7. Nano-Electrochemistry and Nano-Electrografting with an Original Combined AFM-SECM

    Science.gov (United States)

    Ghorbal, Achraf; Grisotto, Federico; Charlier, Julienne; Palacin, Serge; Goyer, Cédric; Demaille, Christophe; Ben Brahim, Ammar

    2013-01-01

    This study demonstrates the advantages of the combination between atomic force microscopy and scanning electrochemical microscopy. The combined technique can perform nano-electrochemical measurements onto agarose surface and nano-electrografting of non-conducting polymers onto conducting surfaces. This work was achieved by manufacturing an original Atomic Force Microscopy-Scanning ElectroChemical Microscopy (AFM-SECM) electrode. The capabilities of the AFM-SECM-electrode were tested with the nano-electrografting of vinylic monomers initiated by aryl diazonium salts. Nano-electrochemical and technical processes were thoroughly described, so as to allow experiments reproducing. A plausible explanation of chemical and electrochemical mechanisms, leading to the nano-grafting process, was reported. This combined technique represents the first step towards improved nano-processes for the nano-electrografting. PMID:28348337

  8. Optical Beam Deflection Based AFM with Integrated Hardware and Software Platform for an Undergraduate Engineering Laboratory

    Directory of Open Access Journals (Sweden)

    Siu Hong Loh

    2017-02-01

    Full Text Available Atomic force microscopy (AFM has been used extensively in nanoscience research since its invention. Recently, many teaching laboratories in colleges, undergraduate institutions, and even high schools incorporate AFM as an effective teaching tool for nanoscience education. This paper presents an optical beam deflection (OBD based atomic force microscope, designed specifically for the undergraduate engineering laboratory as a teaching instrument. An electronic module for signal conditioning was built with components that are commonly available in an undergraduate electronic laboratory. In addition to off-the-shelf mechanical parts and optics, the design of custom-built mechanical parts waskept as simple as possible. Hence, the overall cost for the setup is greatly reduced. The AFM controller was developed using National Instruments Educational Laboratory Virtual Instrumentation Suite (NI ELVIS, an integrated hardware and software platform which can be programmed in LabVIEW. A simple yet effective control algorithm for scanning and feedback control was developed. Despite the use of an educational platform and low-cost components from the undergraduate laboratory, the developed AFM is capable of performing imaging in constant-force mode with submicron resolution and at reasonable scanning speed (approximately 18 min per image. Therefore, the AFM is suitable to be used as an educational tool for nanoscience. Moreover, the construction of the system can be a valuable educational experience for electronic and mechanical engineering students.

  9. AFM Nanotools for Surgery of Biological Cells

    Energy Technology Data Exchange (ETDEWEB)

    Beard, J D; Gordeev, S N [Department of Physics, Claverton Down, University of Bath, Bath, BA2 7AY (United Kingdom); Guy, R H, E-mail: jdb28@bath.ac.uk [Department of Pharmacy and Pharmacology, Claverton Down, University of Bath, Bath, BA2 7AY (United Kingdom)

    2011-03-01

    Using a method of electron-beam induced deposition, we have been able to fabricate specialized AFM probes with application as 'nanotools' for the manipulation of biological structures ('nanosurgery'). We describe several such tools, including a 'nanoscalpel', 'nanoneedles' for probing intracellular structures, and a 'nanotome' which can separate surface layers from a biological structure. These applications are demonstrated by performing nanomanipulation on corneocyte cells from the outer layer of human skin.

  10. Effects of human head hair on performance and thermoregulatory responses during 10-km outdoor running in healthy men

    Directory of Open Access Journals (Sweden)

    Angelo Ruediger Pisani Martini

    2016-05-01

    Full Text Available DOI: http://dx.doi.org/10.5007/1980-0037.2016v18n2p155   The aim of the present study was to evaluate the effects of human head hair on performance and thermoregulatory responses during 10-km outdoor running in healthy men. Twelve healthy males (29.5 ± 3.7 years, 174.9 ± 4.3 cm, 72.7 ± 3.2 kg and VO2max 44.6 ± 3.4 ml.kg-1.min-1 participated in two self-paced outdoor 10-km running trials separated by 7 days: 1 HAIR, subjects ran with their natural head hair; 2 NOHAIR, subjects ran after their hair had been totally shaved. Average running velocity was calculated from each 2-km running time. Rectal temperature, heart rate and physiological strain index were measured before and after the 10-km runs and at the end of each 2 km. The rate of heat storage was measured every 2 km. The environmental stress (WBGT was measured every 10 min. The running velocity (10.9 ± 1 and 10.9 ± 1.1 km.h-1, heart rate (183 ± 10 and 180 ± 12 bpm, rectal temperature (38.82 ± 0.29 and 38.81 ± 0.49oC, physiological strain index (9 ± 1 and 9 ± 1, or heat storage rate (71.9 ± 64.1 and 80.7 ± 56.7 W.m-1 did not differ between the HAIR and NOHAIR conditions, respectively (p>0.05. There was no difference in WBGT between the HAIR and NOHAIR conditions (24.0 ± 1.4 and 23.2 ± 1.5ºC, respectively; p=0.10. The results suggest that shaved head hair does not alter running velocity or thermoregulatory responses during 10-km running under the sun.

  11. Modular design of AFM probe with sputtered silicon tip

    DEFF Research Database (Denmark)

    Rasmussen, Peter; Thaysen, Jacob; Bouwstra, Siebe

    2001-01-01

    of the thin films constituting the cantilever. The AFM probe has an integrated tip made of a thick sputtered silicon layer, which is deposited after the probe has been defined and just before the cantilevers are released. The tips are so-called rocket tips made by reactive ion etching. We present probes...

  12. A 30+ Year AVHRR LAI and FAPAR Climate Data Record: Algorithm Description, Validation, and Case Study

    Science.gov (United States)

    Claverie, Martin; Matthews, Jessica L.; Vermote, Eric F.; Justice, Christopher O.

    2016-01-01

    In- land surface models, which are used to evaluate the role of vegetation in the context ofglobal climate change and variability, LAI and FAPAR play a key role, specifically with respect to thecarbon and water cycles. The AVHRR-based LAIFAPAR dataset offers daily temporal resolution,an improvement over previous products. This climate data record is based on a carefully calibratedand corrected land surface reflectance dataset to provide a high-quality, consistent time-series suitablefor climate studies. It spans from mid-1981 to the present. Further, this operational dataset is availablein near real-time allowing use for monitoring purposes. The algorithm relies on artificial neuralnetworks calibrated using the MODIS LAI/FAPAR dataset. Evaluation based on cross-comparisonwith MODIS products and in situ data show the dataset is consistent and reliable with overalluncertainties of 1.03 and 0.15 for LAI and FAPAR, respectively. However, a clear saturation effect isobserved in the broadleaf forest biomes with high LAI (greater than 4.5) and FAPAR (greater than 0.8) values.

  13. Evaluation of elastic properties of DLC layers using resonant ultrasound spectroscopy and AFM nanoindentation

    Czech Academy of Sciences Publication Activity Database

    Kocourek, Tomáš; Růžek, Michal; Landa, Michal; Jelínek, Miroslav; Mikšovský, Jan; Kopeček, Jaromír

    2011-01-01

    Roč. 205, č. 2 (2011), S67-S70 ISSN 0257-8972 R&D Projects: GA ČR(CZ) GA101/09/0702 Institutional research plan: CEZ:AV0Z10100522; CEZ:AV0Z20760514 Keywords : RUS-resonant ultrasound spectroscopy * PLD * diamond-like carbon * elastic properties * AFM nanoindentation Subject RIV: BH - Optics, Masers, Lasers Impact factor: 1.867, year: 2011

  14. Using XAFS, EDAX and AFM in comparative study of various natural and synthetic emeralds

    International Nuclear Information System (INIS)

    Parikh, P.; Saini, N.L.; Dalela, S.; Bhardwaj, D.M.; Fernandes, S.; Gupta, R.P.; Garg, K.B.

    2003-01-01

    We have performed XAFS, EDAX and AFM studies on some natural and synthetic emeralds. While the XAFS results yield information on changes in the valence of the Cr ion and the n-n distance the AFM is used to determine the areal atomic density on surface of the crystals. It is a pilot study to explore if the three techniques can offer a possible way of distinguishing between the natural and synthetic emeralds and the results are promising

  15. Seasonally Feed-Related Aflatoxins B1 and M1 Spread in Semiarid Industrial Dairy Herd and Its Deteriorating Impacts on Food and Immunity

    Directory of Open Access Journals (Sweden)

    Saideh Mozafari

    2017-01-01

    Full Text Available To comparatively determine the levels of aflatoxin (AF B1 in feedstuffs and of AFM1 in milk from semiarid industrial cattle farms in northeastern Iran during four seasons and to elucidate the effects of mixed AFB1 and AFM1 on bovine granulocytes, 72 feedstuffs (concentrate, silage, and totally mixed ration (TMR and 200 bulk milk samples were simultaneously collected for ELISA-based AFs detection. Isolated blood and milk neutrophils (n=8/treatment were also preincubated with mix of 10 ng/ml AFB1 and 10 ng/ml AFM1 for 12 h; the impact was assessed on neutrophils functions. AFB1 levels in feedstuffs averaged 28 μg/kg (4–127 μg/kg, with TMR maximal (38±6.3 μg/kg, concentrate (32±6.5 μg/kg, and silage (16±1.5 μg/kg. The levels of AFB1 and AFM1 in feedstuffs and milk averaged 42±9.3, 27±2.8, 26±4.1, and 18.5±2.8 μg/kg and 85±7.3, 62±6.1, 46±6.2, and 41±6.5 ppb μg/kg in winter (maximal, autumn, spring, and summer, respectively. Mix of AFB1 and AFM1 weakened various functions of granulocytes. It adds new reason why during winter semiarid raised food-producing animals show more immune-incompetence.

  16. Ultrasonically synthesized organic liquid-filled chitosan microcapsules: part 2: characterization using AFM (atomic force microscopy) and combined AFM-confocal laser scanning fluorescence microscopy.

    Science.gov (United States)

    Mettu, Srinivas; Ye, Qianyu; Zhou, Meifang; Dagastine, Raymond; Ashokkumar, Muthupandian

    2018-04-25

    Atomic Force Microscopy (AFM) is used to measure the stiffness and Young's modulus of individual microcapsules that have a chitosan cross-linked shell encapsulating tetradecane. The oil filled microcapsules were prepared using a one pot synthesis via ultrasonic emulsification of tetradecane and crosslinking of the chitosan shell in aqueous solutions of acetic acid. The concentration of acetic acid in aqueous solutions of chitosan was varied from 0.2% to 25% v/v. The effect of acetic acid concentration and size of the individual microcapsules on the strength was probed. The deformations and forces required to rupture the microcapsules were also measured. Three dimensional deformations of microcapsules under large applied loads were obtained by the combination of Laser Scanning Confocal Microscopy (LSCM) with Atomic Force Microscopy (AFM). The stiffness, and hence the modulus, of the microcapsules was found to decrease with an increase in size with the average stiffness ranging from 82 to 111 mN m-1 and average Young's modulus ranging from 0.4 to 6.5 MPa. The forces required to rupture the microcapsules varied from 150 to 250 nN with deformations of the microcapsules up to 62 to 110% relative to their radius, respectively. Three dimensional images obtained using laser scanning confocal microscopy showed that the microcapsules retained their structure and shape after being subjected to large deformations and subsequent removal of the loads. Based on the above observations, the oil filled chitosan crosslinked microcapsules are an ideal choice for use in the food and pharmaceutical industries as they would be able to withstand the process conditions encountered.

  17. Simulation of CNT-AFM tip based on finite element analysis for targeted probe of the biological cell

    Energy Technology Data Exchange (ETDEWEB)

    Yousefi, Amin Termeh, E-mail: at.tyousefi@gmail.com; Miyake, Mikio, E-mail: miyakejaist@gmail.com; Ikeda, Shoichiro, E-mail: sho16.ikeda@gmail.com [ChECA IKohza, Dept. Environmental & Green Technology (EGT), Malaysia, Japan International Institute of Technology (MJIIT), University Technology Malaysia - UTM, Kualalumpur (Malaysia); Mahmood, Mohamad Rusop, E-mail: nano@uitm.gmail.com [NANO-SciTech Centre, Institute of Science, Universiti Teknologi MARA (UiTM), Shah Alam, Selangor (Malaysia)

    2016-07-06

    Carbon nanotubes (CNTs) are potentially ideal tips for atomic force microscopy (AFM) due to the robust mechanical properties, nano scale diameter and also their ability to be functionalized by chemical and biological components at the tip ends. This contribution develops the idea of using CNTs as an AFM tip in computational analysis of the biological cell’s. Finite element analysis employed for each section and displacement of the nodes located in the contact area was monitored by using an output database (ODB). This reliable integration of CNT-AFM tip process provides a new class of high performance nanoprobes for single biological cell analysis.

  18. AFM studies on heavy ion irradiated YBCO single crystals

    International Nuclear Information System (INIS)

    Lakhani, Archana; Marhas, M.K.; Saravanan, P.; Ganesan, V.; Srinivasan, R.; Kanjilal, D.; Mehta, G.K.; Elizabeth, Suja; Bhat, H.L.

    2000-01-01

    Atomic Force Microscopy (AFM) is extensively used to characterise the surface morphology of high energy ion irradiated single crystals of high temperature superconductor - YBCO. Our earlier systematic studies on thin films of YBCO under high energy and heavy ion irradiation shows clear evidence of ion induced sputtering or erosion, even though the effect is more on the grain boundaries. These earlier results were supported by electrical resistance measurements. In order to understand more clearly, the nature of surface modification at these high energies, AFM studies were carried out on single crystals of YBCO. Single crystals were chosen in order to see the effect on crystallites alone without interference from grain boundaries. 200 MeV gold ions were used for investigation using the facilities available at Nuclear Science Centre, New Delhi. The type of ion and the range of energies were chosen to meet the threshold for electronically mediated defect production. The results are in conformity with our earlier studies and will be described in detail in the context of electronic energy loss mediated sputtering or erosion. (author)

  19. Spin Dynamics and Quantum Tunneling in Fe8 Nanomagnet and in AFM Rings by NMR

    Energy Technology Data Exchange (ETDEWEB)

    Ho-Baek, Seung [Iowa State Univ., Ames, IA (United States)

    2004-01-01

    In this thesis, our main interest has been to investigate the spin dynamics and quantum tunneling in single molecule magnets (SMMs), For this we have selected two different classes of SMMs: a ferrimagnetic total high spin S = 10 cluster Fe8 and antiferromagnetic (AFM) ring-type clusters. For Fe8, our efforts have been devoted to the investigation of the quantum tunneling of magnetization in the very low temperature region. The most remarkable experimental finding in Fe8 is that the nuclear spin-lattice relaxation rate (1/T{sub l}) at low temperatures takes place via strong collision mechanism, and thus it allows to measure directly the tunneling rate vs T and H for the first time. For AFM rings, we have shown that 1/T{sub l} probes the thermal fluctuations of the magnetization in the intermediate temperature range. We find that the fluctuations are dominated by a single characteristic frequency which has a power law T-dependence indicative of fluctuations due to electron-acoustic phonon interactions.

  20. Magma reservoir at Mt. Vesuvius: Deeper than 10 km

    International Nuclear Information System (INIS)

    Natale, M.; Luongo, G.; Nunziata, C.; Panza, G.F.

    2005-07-01

    One- and two-dimensional Vp models were obtained by TomoVes experiment, all characterized by low Vp in the uppermost 500 m and a sharp discontinuity at about 2-3 km beneath the volcano. Large amplitude late arrivals were identified as P- to S-phases converted at the top, between 8 and 10 km deep, of a low velocity layer with a dramatic drop of Vs, from approximately 3.6 km/s to less than 1.0 km/s. Here we synthesize the interpretation of Rayleigh wave dispersion measurements, made by several authors, to delineate the extent of such anomalous layer of hot, partially molten, crust material. Our non-linear inversion of broad-band dispersion measurements, gives a thickness not greater than 0.35 km, if we assume Vs equal to 1.0 km/s. The volume occupied by this very low velocity layer, sill shaped, is compatible with the size of Mt. Vesuvius cone, but it develops above a much larger hot mass which could be the parental source as the erupted products are only few percent of magma chamber. (author)

  1. Joint Research on Scatterometry and AFM Wafer Metrology

    OpenAIRE

    Bodermann, B.; Buhr, E.; Danzebrink, H.U.; Bär, M.; Scholze, F.; Krumrey, M.; Wurm, M.; Klapetek, P.; Hansen, P.E.; Korpelainen, V.; Van Veghel, M.; Yacoot, A.; Siitonen, S.; El Gawhary, O.; Burger, S.

    2011-01-01

    Supported by the European Commission and EURAMET, a consortium of 10 participants from national metrology institutes, universities and companies has started a joint research project with the aim of overcoming current challenges in optical scatterometry for traceable linewidth metrology. Both experimental and modelling methods will be enhanced and different methods will be compared with each other and with specially adapted atomic force microscopy (AFM) and scanning electron microscopy (SEM) m...

  2. Plasma concentration of high-mobility group box 1 (HMGB1) after 100 drop to vertical jumps and after a 1200-km bicycle race.

    Science.gov (United States)

    Behringer, M; Kilian, Y; Montag, J; Geesmann, B; Mester, J

    2016-01-01

    High-mobility group box 1 (HMGB1) has recently been reported to be involved in proinflammation and tissue repair. Therefore, we hypothesized that HMGB1 is released into the bloodstream after eccentric exercises or prolonged endurance activities. Blood samples from 11 participants that performed 100 drop to vertical jumps (DVJ) and from 10 participants that took part in the 1200-km 'Paris-Brest-Paris' bicycle race (PBP) were tested for HMGB1 and creatine kinase (CK) levels. CK increased after both DVJ (pre: 150.6 ± 81.5 U/L; post: 188.8 ± 95.5 U/L 8 h: 790.5 ± 346.4 U/L) and PBP (pre: 81.3 ± 36.4 U/L; post: 725.2 ± 229.5 U/L; 12 h: 535.8 ± 188.6 U/L), indicating membrane damage. However, HMGB1 plasma levels remained below the detection limit (78 pg/mL) of the applied enzyme-linked immunosorbent assay kit for all blood samples analysed. That is, neither high intensity eccentric exercises (DVJ) nor prolonged endurance events (PBP) seemed to affect HMGB1 levels in blood at selected time points.

  3. Measuring protein isoelectric points by AFM-based force spectroscopy using trace amounts of sample

    Science.gov (United States)

    Guo, Shifeng; Zhu, Xiaoying; Jańczewski, Dominik; Lee, Serina Siew Chen; He, Tao; Teo, Serena Lay Ming; Vancso, G. Julius

    2016-09-01

    Protein charge at various pH and isoelectric point (pI) values is important in understanding protein function. However, often only trace amounts of unknown proteins are available and pI measurements cannot be obtained using conventional methods. Here, we show a method based on the atomic force microscope (AFM) to determine pI using minute quantities of proteins. The protein of interest is immobilized on AFM colloidal probes and the adhesion force of the protein is measured against a positively and a negatively charged substrate made by layer-by-layer deposition of polyelectrolytes. From the AFM force-distance curves, pI values with an estimated accuracy of ±0.25 were obtained for bovine serum albumin, myoglobin, fibrinogen and ribonuclease A over a range of 4.7-9.8. Using this method, we show that the pI of the ‘footprint’ of the temporary adhesive proteins secreted by the barnacle cyprid larvae of Amphibalanus amphitrite is in the range 9.6-9.7.

  4. Soft colloidal probes for AFM force measurements between water droplets in oil

    KAUST Repository

    Vakarelski, Ivan Uriev; Li, Erqiang; Thoroddsen, Sigurdur T

    2014-01-01

    Here we introduce an extension of the atomic force microscopy (AFM) colloidal probe technique, as a simple and reliable experimental approach to measure the interaction forces between small water droplets (~80-160. μm) dispersed in oil. Small water droplets are formed by capillary breakup of a microscale water jet in air, which is forced out of a fine capillary nozzle, and deposited on a superhydrophobic substrate immersed in tetradecane oil medium. In these conditions the water droplets are very loosely attached to the superhydrophobic substrate and are easily picked up with a hydrophobic AFM cantilever to form a soft colloidal probe. Sample force measurements are conducted to demonstrate the capability of the technique.

  5. Soft colloidal probes for AFM force measurements between water droplets in oil

    KAUST Repository

    Vakarelski, Ivan Uriev

    2014-11-01

    Here we introduce an extension of the atomic force microscopy (AFM) colloidal probe technique, as a simple and reliable experimental approach to measure the interaction forces between small water droplets (~80-160. μm) dispersed in oil. Small water droplets are formed by capillary breakup of a microscale water jet in air, which is forced out of a fine capillary nozzle, and deposited on a superhydrophobic substrate immersed in tetradecane oil medium. In these conditions the water droplets are very loosely attached to the superhydrophobic substrate and are easily picked up with a hydrophobic AFM cantilever to form a soft colloidal probe. Sample force measurements are conducted to demonstrate the capability of the technique.

  6. Railgun accelerators for launching 0.1-g payloads at velocities greater than 150 km/s

    International Nuclear Information System (INIS)

    Hawke, R.S.

    1979-01-01

    The promise of an abundant energy supply has inspired many approaches to controlling thermal nuclear fusion. One approach to initiating fusion is to use a hypervelocity projectile to impact a deuterium--tritium (DT) pellet. For this purpose, magnetic accelerators have been propsed for accelerating macroparticles to velocities greater than 100 km/s. This paper summarizes a portion of a study that assesses the feasibility of accelerating a 0.1-g payload to a velocity of 150 km/s or more. In that study it was concluded that magnetic-gradient and railgun accelerators could achieve the goal. The critical factors that limit the design and operation of railgun accelerators are discussed. These factors are combined with a simulation code to assess potential railgun performance in this regime

  7. Characterization of deep nanoscale surface trenches with AFM using thin carbon nanotube probes in amplitude-modulation and frequency-force-modulation modes

    International Nuclear Information System (INIS)

    Solares, Santiago D

    2008-01-01

    The characterization of deep surface trenches with atomic force microscopy (AFM) presents significant challenges due to the sharp step edges that disturb the instrument and prevent it from faithfully reproducing the sample topography. Previous authors have developed AFM methodologies to successfully characterize semiconductor surface trenches with dimensions on the order of tens of nanometers. However, the study of imaging fidelity for features with dimensions smaller than 10 nm has not yet received sufficient attention. Such a study is necessary because small features in some cases lead to apparently high-quality images that are distorted due to tip and sample mechanical deformation. This paper presents multi-scale simulations, illustrating common artifacts affecting images of nanoscale trenches taken with fine carbon nanotube probes within amplitude-modulation and frequency-force-modulation AFM (AM-AFM and FFM-AFM, respectively). It also describes a methodology combining FFM-AFM with a step-in/step-out algorithm analogous to that developed by other groups for larger trenches, which can eliminate the observed artifacts. Finally, an overview of the AFM simulation methods is provided. These methods, based on atomistic and continuum simulation, have been previously used to study a variety of samples including silicon surfaces, carbon nanotubes and biomolecules

  8. Wide-field 12CO (J=2-1) and 13CO (J=2-1) Observations toward the Aquila Rift and Serpens Molecular Cloud Complexes. I. Molecular Clouds and Their Physical Properties

    Science.gov (United States)

    Nakamura, Fumitaka; Dobashi, Kazuhito; Shimoikura, Tomomi; Tanaka, Tomohiro; Onishi, Toshikazu

    2017-03-01

    We present the results of wide-field 12CO (J=2{--}1) and 13CO (J=2{--}1) observations toward the Aquila Rift and Serpens molecular cloud complexes (25^\\circ < l< 33^\\circ and 1^\\circ < b< 6^\\circ ) at an angular resolution of 3.‧4 (≈ 0.25 pc) and at a velocity resolution of 0.079 km s-1 with velocity coverage of -5 {km} {{{s}}}-1< {V}{LSR}< 35 {km} {{{s}}}-1. We found that the 13CO emission better traces the structures seen in the extinction map, and derived the {X}{13{CO}}-factor of this region. Applying SCIMES to the 13CO data cube, we identified 61 clouds and derived their mass, radii, and line widths. The line width-radius relation of the identified clouds basically follows those of nearby molecular clouds. The majority of the identified clouds are close to virial equilibrium, although the dispersion is large. By inspecting the 12CO channel maps by eye, we found several arcs that are spatially extended to 0.°2-3° in length. In the longitude-velocity diagrams of 12CO, we also found two spatially extended components that appear to converge toward Serpens South and the W40 region. The existence of two components with different velocities and arcs suggests that large-scale expanding bubbles and/or flows play a role in the formation and evolution of the Serpens South and W40 cloud.

  9. Results of agriclimatological studies using multiple satellite sensors like NOAA AVHRR; GMS IR and LANDSAT MSS and TM

    International Nuclear Information System (INIS)

    Choudhury, A.M.

    1990-08-01

    Bangladesh Space Research and Remote Sensing Organization (SPARRSO) routinely receives NOAA and GMS imagery and uses them in agrometeorological monitoring, it also uses LANDSAT MSS and TM data for this purpose. Analysis of multiple satellite sensor data shows advantages for high resolution sensors. However, in the ease of crop monitoring, a good correlation has been obtained between results obtained with NOAA AVHRR and LANDSAT MSS for vegetation index. Crop estimation has been made using all kinds of sensors and it has been found that higher resolution data always give more accurate results. (author). 3 refs

  10. Low-level shear stress promotes migration of liver cancer stem cells via the FAK-ERK1/2 signalling pathway.

    Science.gov (United States)

    Sun, Jinghui; Luo, Qing; Liu, Lingling; Song, Guanbin

    2018-07-28

    Cancer stem cells (CSCs) are a small subpopulation of tumour cells that have been proposed to be responsible for cancer initiation, chemotherapy resistance and cancer recurrence. Shear stress activated cellular signalling is involved in cellular migration, proliferation and differentiation. However, little is known about the effects of shear stress on the migration of liver cancer stem cells (LCSCs). Here, we studied the effects of shear stress that are generated from a parallel plated flow chamber system, on LCSC migration and the activation of focal adhesion kinase (FAK) and extracellular signal regulated kinase1/2 (ERK1/2), using transwell assay and western blot, respectively. We found that 2 dyne/cm 2 shear stress loading for 6 h promotes LCSC migration and activation of the FAK and ERK1/2 signalling pathways, whereas treatment with the FAK phosphorylation inhibitor PF573228 or the ERK1/2 phosphorylation inhibitor PD98059 suppressed the shear stress-promoted migration, indicating the involvement of FAK and ERK1/2 activation in shear stress-induced LCSC migration. Additionally, atomic force microscopy (AFM) analysis showed that shear stress lowers LCSC stiffness via the FAK and ERK1/2 pathways, suggesting that the mechanism by which shear stress promotes LCSC migration might partially be responsible for the decrease in cell stiffness. Further experiments focused on the role of the actin cytoskeleton, demonstrating that the F-actin filaments in LCSCs are less well-defined after shear stress treatment, providing an explanation for the reduction in cell stiffness and the promotion of cell migration. Overall, our study demonstrates that shear stress promotes LCSC migration through the activation of the FAK-ERK1/2 signalling pathways, which further results in a reduction of organized actin and softer cell bodies. Copyright © 2018 Elsevier B.V. All rights reserved.

  11. Characteristics of fracture during the approach process and wear mechanism of a silicon AFM tip

    International Nuclear Information System (INIS)

    Chung, Koo-Hyun; Lee, Yong-Ha; Kim, Dae-Eun

    2005-01-01

    The wear of an atomic force microscope (AFM) tip is one of the crucial issues in AFM as well as in other probe-based applications. In this work, wear tests under extremely low normal load using an AFM were conducted. Also, in order to understand the nature of silicon tip wear, the wear characteristics of crystal silicon and amorphous silicon oxide layer were investigated by a high-resolution transmission electron microscope (HRTEM). It was found that fracture of the tip readily occurred due to impact during the approach process. Experimental results showed that the impact should be below 0.1 nN s to avoid significant fracture of the tip. Also, it was observed that wear of the amorphous layer, formed at the end of the tip, occurred at the initial stage of the silicon tip damage process. Based on Archard's wear law, the wear coefficient of the amorphous layer was in the range of 0.009-0.014. As for the wear characteristics of the silicon tip, it was shown that wear occurred gradually under light normal load and the wear rate decreased with increase in the sliding distance. As for the wear mechanism of the silicon tip, oxidation wear was identified to be the most significant. It was shown that the degree of oxidation was higher under high normal load and in a nitrogen environment, oxidation of the silicon tip was reduced

  12. Age of peak performance in 50-km ultramarathoners – is it older than in marathoners?

    OpenAIRE

    Nikolaidis PT; Knechtle B

    2018-01-01

    Pantelis Theodoros Nikolaidis,1,2 Beat Knechtle3,4 1Exercise Physiology Laboratory, Nikaia, Greece; 2Laboratory of Exercise Testing, Hellenic Air Force Academy, Dekelia, Greece; 3Medbase St. Gallen Am Vadianplatz, St. Gallen, Switzerland; 4Institute of Primary Care, University of Zurich, Zurich, Switzerland Purpose: Despite the increasing popularity of 50-km ultramarathons during the last few years, only limited information is available regarding the trends in its performance and participatio...

  13. Measurement of nanosize etched pits in SiO2 optical fiber conduit using AFM

    International Nuclear Information System (INIS)

    Espinosa, G.; Golzarri, J.I.; Vazquez, C.; Fragoso, R.

    2003-01-01

    Fission fragment tracks from 252 Cf have been observed in SiO 2 optical fiber, using an atomic force microscope (AFM), after a very short chemical etching in hydrofluoric acid solution at normal temperature. The nuclear track starting and evolution process is followed by the AFM direct measurements on the material surface and beyond a fine layer of the surface material. The images of the scanned cones were determined observing the two predominant energies from 252 Cf fission fragments and the development of the tracks in the 150 μm diameter optical fiber conduit

  14. Gridded 5km GHCN-Daily Temperature and Precipitation Dataset, Version 1

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The Gridded 5km GHCN-Daily Temperature and Precipitation Dataset (nClimGrid) consists of four climate variables derived from the GHCN-D dataset: maximum temperature,...

  15. A novel dog-bone oscillating AFM probe with thermal actuation and piezoresistive detection.

    Science.gov (United States)

    Xiong, Zhuang; Mairiaux, Estelle; Walter, Benjamin; Faucher, Marc; Buchaillot, Lionel; Legrand, Bernard

    2014-10-31

    In order to effectively increase the resonance frequency and the quality factor of atomic force microscope (AFM) probes, a novel oscillating probe based on a dog-bone shaped MEMS resonator was conceived, designed, fabricated and evaluated. The novel probe with 400 μm in length, 100 μm in width and 5 μm in thickness was enabled to feature MHz resonance frequencies with integrated thermal actuation and piezoresistive detection. Standard silicon micromachining was employed. Both electrical and optical measurements were carried out in air. The resonance frequency and the quality factor of the novel probe were measured to be 5.4 MHz and 4000 respectively, which are much higher than those (about several hundreds of kHz) of commonly used cantilever probes. The probe was mounted onto a commercial AFM set-up through a dedicated probe-holder and circuit board. Topographic images of patterned resist samples were obtained. It is expected that the resonance frequency and the measurement bandwidth of such probes will be further increased by a proper downscaling, thus leading to a significant increase in the scanning speed capability of AFM instruments.

  16. On the nonlinear dynamics of trolling-mode AFM: Analytical solution using multiple time scales method

    Science.gov (United States)

    Sajjadi, Mohammadreza; Pishkenari, Hossein Nejat; Vossoughi, Gholamreza

    2018-06-01

    Trolling mode atomic force microscopy (TR-AFM) has resolved many imaging problems by a considerable reduction of the liquid-resonator interaction forces in liquid environments. The present study develops a nonlinear model of the meniscus force exerted to the nanoneedle of TR-AFM and presents an analytical solution to the distributed-parameter model of TR-AFM resonator utilizing multiple time scales (MTS) method. Based on the developed analytical solution, the frequency-response curves of the resonator operation in air and liquid (for different penetration length of the nanoneedle) are obtained. The closed-form analytical solution and the frequency-response curves are validated by the comparison with both the finite element solution of the main partial differential equations and the experimental observations. The effect of excitation angle of the resonator on horizontal oscillation of the probe tip and the effect of different parameters on the frequency-response of the system are investigated.

  17. Influence of smectite suspension structure on sheet orientation in dry sediments: XRD and AFM applications.

    Science.gov (United States)

    Zbik, Marek S; Frost, Ray L

    2010-06-15

    The structure-building phenomena within clay aggregates are governed by forces acting between clay particles. Measurements of such forces are important to understand in order to manipulate the aggregate structure for applications such as dewatering of mineral processing tailings. A parallel particle orientation is required when conducting XRD investigation on the oriented samples and conduct force measurements acting between basal planes of clay mineral platelets using atomic force microscopy (AFM). To investigate how smectite clay platelets were oriented on silicon wafer substrate when dried from suspension range of methods like SEM, XRD and AFM were employed. From these investigations, we conclude that high clay concentrations and larger particle diameters (up to 5 microm) in suspension result in random orientation of platelets in the substrate. The best possible laminar orientation in the clay dry film, represented in the XRD 001/020 intensity ratio of 47 was obtained by drying thin layers from 0.02 wt.% clay suspensions of the natural pH. Conducted AFM investigations show that smectite studied in water based electrolytes show very long-range repulsive forces lower in strength than electrostatic forces from double-layer repulsion. It was suggested that these forces may have structural nature. Smectite surface layers rehydrate in water environment forms surface gel with spongy and cellular texture which cushion approaching AFM probe. This structural effect can be measured in distances larger than 1000 nm from substrate surface and when probe penetrate this gel layer, structural linkages are forming between substrate and clay covered probe. These linkages prevent subsequently smooth detachments of AFM probe on way back when retrieval. This effect of tearing new formed structure apart involves larger adhesion-like forces measured in retrieval. It is also suggested that these effect may be enhanced by the nano-clay particles interaction. 2010 Elsevier Inc. All

  18. Assembly of live micro-organisms on microstructured PDMS stamps by convective/capillary deposition for AFM bio-experiments

    International Nuclear Information System (INIS)

    Dague, E; Jauvert, E; Laplatine, L; Thibault, C; Viallet, B; Ressier, L

    2011-01-01

    Immobilization of live micro-organisms on solid substrates is an important prerequisite for atomic force microscopy (AFM) bio-experiments. The method employed must immobilize the cells firmly enough to enable them to withstand the lateral friction forces exerted by the tip during scanning but without denaturing the cell interface. In this work, a generic method for the assembly of living cells on specific areas of substrates is proposed. It consists in assembling the living cells within the patterns of microstructured, functionalized poly-dimethylsiloxane (PDMS) stamps using convective/capillary deposition. This versatile approach is validated by applying it to two systems of foremost importance in biotechnology and medicine: Saccharomyces cerevisiae yeasts and Aspergillus fumigatus fungal spores. We show that this method allows multiplexing AFM nanomechanical measurements by force spectroscopy on S. cerevisiae yeasts and high-resolution AFM imaging of germinated Aspergillus conidia in buffer medium. These two examples clearly demonstrate the immense potential of micro-organism assembly on functionalized, microstructured PDMS stamps by convective/capillary deposition for performing rigorous AFM bio-experiments on living cells.

  19. Effect of β-alanine supplementation on 20 km cycling time trial performance

    Directory of Open Access Journals (Sweden)

    Ruth Margaret JAMES

    2014-09-01

    Full Text Available The effects of β-alanine supplementation on high-intensity cycling performance and capacity have been evaluated, although the effects on longer duration cycling performance are unclear. Nineteen UK category 1 male cyclists completed four 20 km cycling time trials, two before and two after supplementation with either 6.4 g•d-1 β-alanine (n = 10; BA or a matched placebo (n = 9; P. Performance time for the 20 km time trial and 1 km split times were recorded. There was no significant effect of β-alanine supplementation on 20 km time trial performance (BA-pre 1943 ± 129 s; BA-post 1950 ± 147 s; P-pre 1989 ± 106 s; P-post 1986 ± 115 s or on the performance of each 1 km split. The effect of β-alanine on 20 km time trial performance was deemed unclear as determined by magnitude based inferences. Supplementation with 6.4 g•d-1 of β-alanine for 4 weeks did not affect 20 km cycling time trial performance in well trained male cyclists.

  20. AFM analysis of bleaching effects on dental enamel microtopography

    Energy Technology Data Exchange (ETDEWEB)

    Pedreira de Freitas, Ana Carolina, E-mail: anacarolfreitas@usp.br [Departamento de Dentistica, Faculdade de Odontologia da Universidade de Sao Paulo, Av. Prof. Lineu Prestes, 2227 - Cidade Universitaria, CEP 05508-000, Sao Paulo (Brazil); Cardoso Espejo, Luciana, E-mail: luespejo@hotmail.com [Departamento de Dentistica, Faculdade de Odontologia da Universidade de Sao Paulo, Av. Prof. Lineu Prestes, 2227 - Cidade Universitaria, CEP 05508-000, Sao Paulo (Brazil); Brossi Botta, Sergio, E-mail: sbbotta@usp.br [Departamento de Dentistica, Faculdade de Odontologia da Universidade de Sao Paulo, Av. Prof. Lineu Prestes, 2227 - Cidade Universitaria, CEP 05508-000, Sao Paulo (Brazil); Sa Teixeira, Fernanda de, E-mail: nandast@if.usp.br [Laboratorio de Filmes Finos, Instituto de Fisica da Universidade de Sao Paulo, Rua do Matao, Travessa R, 187 - Cidade Universitaria, CEP 05314-970, Sao Paulo (Brazil); Cerqueira, Luz Maria Aparecida A., E-mail: maacluz@usp.br [Departamento de Dentistica, Faculdade de Odontologia da Universidade de Sao Paulo, Av. Prof. Lineu Prestes, 2227 - Cidade Universitaria, CEP 05508-000, Sao Paulo (Brazil); Garone-Netto, Narciso, E-mail: ngarone@usp.br [Departamento de Dentistica, Faculdade de Odontologia da Universidade de Sao Paulo, Av. Prof. Lineu Prestes, 2227 - Cidade Universitaria, CEP 05508-000, Sao Paulo (Brazil); Bona Matos, Adriana, E-mail: bona@usp.br [Departamento de Dentistica, Faculdade de Odontologia da Universidade de Sao Paulo, Av. Prof. Lineu Prestes, 2227 - Cidade Universitaria, CEP 05508-000, Sao Paulo (Brazil); Barbosa da Silveira Salvadori, Maria Cecilia, E-mail: mcsalva@if.usp.br [Laboratorio de Filmes Finos, Instituto de Fisica da Universidade de Sao Paulo, Rua do Matao, Travessa R, 187 - Cidade Universitaria, CEP 05314-970, Sao Paulo (Brazil)

    2010-02-15

    The purpose of this in vitro study was to test a new methodology to evaluate the effects of 35% hydrogen peroxide agent on the microtopography of sound enamel using an atomic force microscope (AFM). The buccal sound surfaces of three extracted human lower incisors were used, without polishing the surfaces to maintain them with natural morphology. These unpolished surfaces were subjected to bleaching procedure with 35% hydrogen peroxide that consisted of 4 applications of the bleaching agent on enamel surfaces for 10 min each application. Surface images were obtained in a 15 {mu}m x 15 {mu}m area using an AFM. The roughness (Ra and RMS) and the power spectral density (PSD) were obtained before and after the bleaching treatment. As results we could inquire that the PSD analyses were very suitable to identifying the morphological changes on the surfaces, while the Ra and RMS parameters were insufficient to represent the morphological alterations promoted by bleaching procedure on enamel. The morphological wavelength in the range of visible light spectrum (380-750 nm) was analyzed, showing a considerable increase of the PSD with the bleaching treatment.

  1. AFM analysis of bleaching effects on dental enamel microtopography

    International Nuclear Information System (INIS)

    Pedreira de Freitas, Ana Carolina; Cardoso Espejo, Luciana; Brossi Botta, Sergio; Sa Teixeira, Fernanda de; Cerqueira, Luz Maria Aparecida A.; Garone-Netto, Narciso; Bona Matos, Adriana; Barbosa da Silveira Salvadori, Maria Cecilia

    2010-01-01

    The purpose of this in vitro study was to test a new methodology to evaluate the effects of 35% hydrogen peroxide agent on the microtopography of sound enamel using an atomic force microscope (AFM). The buccal sound surfaces of three extracted human lower incisors were used, without polishing the surfaces to maintain them with natural morphology. These unpolished surfaces were subjected to bleaching procedure with 35% hydrogen peroxide that consisted of 4 applications of the bleaching agent on enamel surfaces for 10 min each application. Surface images were obtained in a 15 μm x 15 μm area using an AFM. The roughness (Ra and RMS) and the power spectral density (PSD) were obtained before and after the bleaching treatment. As results we could inquire that the PSD analyses were very suitable to identifying the morphological changes on the surfaces, while the Ra and RMS parameters were insufficient to represent the morphological alterations promoted by bleaching procedure on enamel. The morphological wavelength in the range of visible light spectrum (380-750 nm) was analyzed, showing a considerable increase of the PSD with the bleaching treatment.

  2. Determination of Morphological Parameters of Supported Gold Nanoparticles: Comparison of AFM Combined with Optical Spectroscopy and Theoretical Modeling versus TEM

    Directory of Open Access Journals (Sweden)

    Frank Hubenthal

    2012-07-01

    Full Text Available The morphology of small gold particles prepared by Volmer–Weber growth on sapphire substrates have been investigated by two different characterization techniques. First, by non-extensive atomic force microscopy (AFM in combination with optical spectroscopy and modeling of the optical properties using a theoretical model, recently developed in our group. Second, by extensive transmission electron microscopy (TEM. Comparing the results obtained with both techniques demonstrate that for small gold nanoparticles within the quasistatic limit, the morphological properties can be precisely determined by an appropriate theoretical modeling of the optical properties in combination with simple AFM measurements. The apparent mean axial ratio of the nanoparticles, i.e., the axial ratio that corresponds to the center frequency of the ensemble plasmon resonance, is obtained easily from the extinction spectrum. The mean size is determined by the nanoparticle number density and the amount of deposited material, measured by AFM and a quartz micro balance, respectively. To extract the most probable axial ratio of the nanoparticle ensemble, i.e., the axial ratio that corresponds to the most probable nanoparticle size in the ensemble, we apply the new theoretical model, which allows to extract the functional dependence of the nanoparticle shape on its size. The morphological parameters obtained with this procedure will be afterwards compared to extensive TEM measurements. The results obtained with both techniques yield excellent agreement. For example, the lateral dimensions of the nanoparticles after deposition of 15.2 × 1015 atoms/cm2 of gold has been compared. While a mean lateral diameter of (13 ± 2 nm has been extracted from AFM, optical spectroscopy and modeling, a value of (12 ± 2 nm is derived from TEM. The consistency of the results demonstrate the precision of our new model. Moreover, since our theoretical model allows to extract the functional

  3. Magnetoelectric versus thermal actuation characteristics of shear force AFM probes with piezoresistive detection

    International Nuclear Information System (INIS)

    Sierakowski, Andrzej; Janus, Paweł; Dobrowolski, Rafał; Grabiec, Piotr; Kopiec, Daniel; Majstrzyk, Wojciech; Kunicki, Piotr; Gotszalk, Teodor; Rangelow, Ivo W

    2017-01-01

    In this paper the authors compare methods used for piezoresistive microcantilevers actuation for the atomic force microscopy (AFM) imaging in the dynamic shear force mode. The piezoresistive detection is an attractive technique comparing the optical beam detection of deflection. The principal advantage is that no external alignment of optical source and detector are needed. When the microcantilever is deflected, the stress is transferred into a change of resistivity of piezoresistors. The integration of piezoresistive read-out provides a promising solution in realizing a compact non-contact AFM. Resolution of piezoresistive read-out is limited by three main noise sources: Johnson, 1/ f and thermomechanical noise. In the dynamic shear force mode measurement the method used for cantilever actuation will also affect the recorded noise in the piezoresistive detection circuit. This is the result of a crosstalk between an aluminium path (current loop used for actuation) and piezoresistors located near the base of the beam. In this paper authors described an elaborated in ITE (Institute of Electron Technology) technology of fabrication cantilevers with piezoresistive detection of deflection and compared efficiency of two methods used for cantilever actuation. (paper)

  4. Magnetotransport measurements on AFM structured two-dimensional electron gases on cleaved edges of GaAs/AlGaAs; Magnetotransportmessungen an AFM-strukturierten zweidimensionalen Elektronengasen auf GaAs/AlGaAs-Spaltkanten

    Energy Technology Data Exchange (ETDEWEB)

    Reinwald, Elisabeth

    2009-06-25

    In this thesis a two dimensional electron gas (2DEG) on a (110) cleavage plane of a GaAs/AlGaAs(001) heterostructure was produced by means of cleaved edge overgrowth (CEO) and modulated in two dimensions. The 2DEG was modulated in one direction by a superlattice of the subjacent GaAs/AlGaAs(001) heterostructure. A second modulation, perpendicular to the first was realized by local anodic oxidation (LAO) with an atomic force microscope (AFM). For the process of LAO an electric voltage is applied between the tip of the AFM and the surface of the GaAs. The natural water film on the surface acts as electrolyte so that the GaAs surface is locally oxidized underneath the AFM tip. This oxide leads to a band bending so that the 2DEG underneath the oxide is locally depleted. On these systems magnetotransport measurements revealed that it is actually possible to modulate 2DEGs on a sufficient large area by local anodic oxidation. On the cleaved surfaces the influence of the two dimensional modulation on the electron gas has been demonstrated. (orig.)

  5. NEMO-SN1 observatory developments in view of the European Research Infrastructures EMSO and KM3NET

    Energy Technology Data Exchange (ETDEWEB)

    Favali, Paolo, E-mail: emsopp@ingv.i [Istituto Nazionale di Geofisica e Vulcanologia (INGV), Sect. Roma 2, Via di Vigna Murata 605, 00143 Roma (Italy); Beranzoli, Laura [Istituto Nazionale di Geofisica e Vulcanologia (INGV), Sect. Roma 2, Via di Vigna Murata 605, 00143 Roma (Italy); Italiano, Francesco [Istituto Nazionale di Geofisica e Vulcanologia (INGV), Sect. Palermo, Via Ugo La Malfa 153, 90146 Palermo (Italy); Migneco, Emilio; Musumeci, Mario; Papaleo, Riccardo [Istituto Nazionale di Fisica Nucleare (INFN), Laboratori Nazionali del Sud, Via di S. Sofia 62, 95125 Catania (Italy)

    2011-01-21

    NEMO-SN1 (Western Ionian Sea off Eastern Sicily), the first real-time multiparameter observatory operating in Europe since 2005, is one of the nodes of the upcoming European ESFRI large-scale research infrastructure EMSO (European Multidisciplinary Seafloor Observatory), a network of seafloor observatories placed at marine sites on the European Continental Margin. NEMO-SN1 constitutes also an important test-site for the study of prototypes of Kilometre Cube Neutrino Telescope (KM3NeT), another European ESFRI large-scale research infrastructure. Italian resources have been devoted to the development of NEMO-SN1 facilities and logistics, as with the PEGASO project, while the EC project ESONET-NoE is funding a demonstration mission and a technological test. EMSO and KM3NeT are presently in the Preparatory Phase as projects funded under the EC-FP7.

  6. Statistical flaw strength distributions for glass fibres: Correlation between bundle test and AFM-derived flaw size density functions

    International Nuclear Information System (INIS)

    Foray, G.; Descamps-Mandine, A.; R’Mili, M.; Lamon, J.

    2012-01-01

    The present paper investigates glass fibre flaw size distributions. Two commercial fibre grades (HP and HD) mainly used in cement-based composite reinforcement were studied. Glass fibre fractography is a difficult and time consuming exercise, and thus is seldom carried out. An approach based on tensile tests on multifilament bundles and examination of the fibre surface by atomic force microscopy (AFM) was used. Bundles of more than 500 single filaments each were tested. Thus a statistically significant database of failure data was built up for the HP and HD glass fibres. Gaussian flaw distributions were derived from the filament tensile strength data or extracted from the AFM images. The two distributions were compared. Defect sizes computed from raw AFM images agreed reasonably well with those derived from tensile strength data. Finally, the pertinence of a Gaussian distribution was discussed. The alternative Pareto distribution provided a fair approximation when dealing with AFM flaw size.

  7. Repair promoted by plasmid pKM101 is different from SOS repair

    International Nuclear Information System (INIS)

    Goze, A.; Devoret, R.

    1979-01-01

    In E. coli K12 bacteria carrying plasmid pKM101, prophage lambda was induced at UV doses higher than in plasmid-less parental bacteria. UV-induced reactivation per se was less effective. Bacteria with pKM101 showed no alteration in their division cycle. Plasmid PKM101 coded for a constitutive error-prone repair different from the inducible error-prone repair called SOS repair. Plasmid pKM101 protected E. coli bacteria from UV damage but slightly sensitized them to X-ray lesions. Protection against UV damage was effective in mutant bacteria deficient in DNA excision-repair provided that the recA, lexA and uvrE genes were functional. Survival of phages lambda and S13 after UV irradiation was enhanced in bacteria carrying plasmid pKM101; phage lambda mutagenesis was also increased. Plasmid pKM101 repaired potentially lethal DNA lesions, although Wild-type DNA sequences may not necessarily be restored; hence the mutations observed are the traces of the original DNA lesions. (Auth.)

  8. 1.28 Tbit/s/channel single-polarization DQPSK transmission over 525 km using ultrafast time-domain optical Fourier transformation

    DEFF Research Database (Denmark)

    Guan, P.; Mulvad, Hans Christian Hansen; Tomiyama, Y.

    2010-01-01

    A single-channel 1.28 Tbit/s transmission over 525 km is demonstrated for the first time with a single-polarization DQPSK signal. Ultrafast time-domain optical Fourier transformation is successfully applied to DQPSK signals and results in improved performance and increased system margin.......A single-channel 1.28 Tbit/s transmission over 525 km is demonstrated for the first time with a single-polarization DQPSK signal. Ultrafast time-domain optical Fourier transformation is successfully applied to DQPSK signals and results in improved performance and increased system margin....

  9. A daytime climatological distribution of high opaque ice cloud classes over the Indian summer monsoon region observed from 25-year AVHRR data

    Directory of Open Access Journals (Sweden)

    A. Devasthale

    2009-06-01

    Full Text Available A daytime climatological spatio-temporal distribution of high opaque ice cloud (HOIC classes over the Indian subcontinent (0–40° N, 60° E–100° E is presented using 25-year data from the Advanced Very High Resolution Radiometers (AVHRRs for the summer monsoon months. The HOICs are important for regional radiative balance, precipitation and troposphere-stratosphere exchange. In this study, HOICs are sub-divided into three classes based on their cloud top brightness temperatures (BT. Class I represents very deep convection (BT<220 K. Class II represents deep convection (220 K<=BT<233 K and Class III background convection (233 K<=BT<253 K. Apart from presenting finest spatial resolution (0.1×0.1 degrees and long-term climatology of such cloud classes from AVHRRs to date, this study for the first time illustrates on (1 how these three cloud classes are climatologically distributed during monsoon months, and (2 how their distribution changes during active and break monsoon conditions. It is also investigated that how many deep convective clouds reach the tropopause layer during individual monsoon months. It is seen that Class I and Class II clouds dominate the Indian subcontinent during monsoon. The movement of monsoon over continent is very well reflected in these cloud classes. During monsoon breaks strong suppression of convective activity is observed over the Arabian Sea and the western coast of India. On the other hand, the presence of such convective activity is crucial for active monsoon conditions and all-India rainfall. It is found that a significant fraction of HOICs (3–5% reach the tropopause layer over the Bay of Bengal during June and over the north and northeast India during July and August. Many cases are observed when clouds penetrate the tropopause layer and reach the lower stratosphere. Such cases mostly occur during June compared to the other months.

  10. Measuring the force of single protein molecule detachment from surfaces with AFM.

    Science.gov (United States)

    Tsapikouni, Theodora S; Missirlis, Yannis F

    2010-01-01

    Atomic force microscopy (AFM) was used to measure the non-specific detachment force of single fibrinogen molecules from glass surfaces. The identification of single unbinding events was based on the characteristics of the parabolic curves, recorded during the stretching of protein molecules. Fibrinogen molecules were covalently bound to Si(3)N(4) AFM tips, previously modified with 3-aminopropyl-dimethyl-ethoxysilane, through a homobifunctional poly(ethylene glycol) linker bearing two hydroxysulfosuccinimide esters. The most probable detachment force was found to be 210 pN, when the tip was retracting with a velocity of 1400 nm/s, while the distribution of the detachment distances indicated that the fibrinogen chain can be elongated beyond the length of the physical conformation before detachment. The dependence of the most probable detachment force on the loading rate was examined and the dynamics of fibrinogen binding to the surface were found amenable to the simple expression of the Bell-Evans theory. The theory's expansion, however, by incorporating the concept of the rupture of parallel residue-surface bonds could only describe the detachment of fibrinogen for a small number of such bonds. Finally, the mathematical expression of the Worm-Like Chain model was used to fit the stretching curves before rupture and two interpretations are suggested for the description of the AFM curves with multiple detachment events.

  11. A Climate-Data Record (CDR) of the "Clear Sky" Surface Temperature of the Greenland Ice Sheet

    Science.gov (United States)

    Hall, Dorothy K.; Comiso, J. C.; DiGirolamo, N. E.; Shuman, C. A.

    2011-01-01

    To quantify the ice-surface temperature (IST) we are developing a climate-data record (CDR) of monthly IST of the Greenland ice sheet, from 1982 to the present using Advanced Very High Resolution Radiometer (AVHRR) and Moderate-Resolution Imaging Spectroradiometer (MODIS) data at 5-km resolution. "Clear-sky" surface temperature increases have been measured from the early 1980s to the early 2000s in the Arctic using AVHRR data, showing increases ranging from 0.57-0.02 (Wang and Key, 2005) to 0.72 0.10 deg C per decade (Comiso, 2006). Arctic warming has implications for ice-sheet mass balance because much of the periphery of the ice sheet is near 0 deg C in the melt season and is thus vulnerable to more extensive melting (Hanna et al., 2008). The algorithm used for this work has a long history of measuring IST in the Arctic with AVHRR (Key and Haefliger, 1992). The data are currently available from 1981 to 2004 in the AVHRR Polar Pathfinder (APP) dataset (Fowler et al., 2000). J. Key1NOAA modified the AVHRR algorithm for use with MODIS (Hall et al., 2004). The MODIS algorithm is now being processed over Greenland. Issues being addressed in the production of the CDR are: time-series bias caused by cloud cover, and cross-calibration between AVHRR and MODIS instruments. Because of uncertainties, time series of satellite ISTs do not necessarily correspond with actual surface temperatures. The CDR will be validated by comparing results with in-situ (see Koenig and Hall, in press) and automatic-weather station data (e.g., Shuman et al., 2001).

  12. Recent history of trends in vegetation greenness and large-scale ecosystem disturbances in Eurasia

    International Nuclear Information System (INIS)

    Potter, Christopher; Nemani, Ramakrishna; Kumar, Vipin; Klooster, Steven

    2007-01-01

    Recent patterns of land cover and vegetation dynamics on the Euasian continent have been linked to changes in the global carbon cycle. Our study was conducted to evaluate patterns in a 19-yr record of global satellite observations of terrestrial vegetation from the Advanced Very High Resolution Radiometer (AVHRR) as a means to characterize major trends in both vegetation 'greenness' and ecosystem disturbance. The fraction absorbed of photosynthetically active radiation (FPAR) by vegetation canopies worldwide has been computed from the AVHRR at a monthly time interval from 1982 to 2000 and gridded at a spatial resolution of 8 km globally. Unlike previous studies of the AVHRR multiyear time-series of vegetation dynamics, the 8-km spatial resolution makes it possible to compare disturbance events and greenness trends at the same level of spatial detail. Positive trends in FPAR were detected throughout a major greenbelt of central-eastern Europe starting in the mid-1980s. This Eurasian greenbelt extended in a wide swath over the Urals, into the vicinity of Lake Baykal south of the central Siberian plateau, mainly along a latitude belt from 55 deg N to 65 deg N. There was also significantly positive greening in relatively large areas of Great Britain, Italy, Greece, Turkey, the Caucasus and southern India. Nonetheless, a strong downward trend in the FPAR time-series over most of Eurasia was observed by the end of the 1990s. Throughout the 19-yr time period, Eurasia was also impacted by many notable droughts and other disturbance events that could have substantially offset decadal carbon gains attributed to satellite-observed greening. Large-scale ecosystems disturbance events were identified in the FPAR time-series by locating anomalously low values (FPAR-LO) that lasted longer than 12 consecutive months at any 8-km pixel. We find verifiable evidence of numerous disturbance types across Eurasia, including regional patterns of severe droughts, forest fires and insect

  13. Binding behavior of CRP and anti-CRP antibody analyzed with SPR and AFM measurement

    International Nuclear Information System (INIS)

    Lee, Soo-Keun; Kim, Hyun-Chul; Cho, Sang-Joon; Jeong, Sang Won; Jeon, Won Bae

    2008-01-01

    Atomic force microscope (AFM) was exploited to take picture of the molecular topology of C-reactive protein (CRP) in phosphate-buffered saline (PBS) solution. An explicit molecular image of CRP demonstrated a pentagonal structure composed of five subunits. Dimensions of the doughnut-shaped CRP molecule measured by AFM were about 25 nm in outside diameter and 10 nm in central pore diameter, and the height of CRP molecule was about 4 nm which was comparable to the value determined by X-ray crystallography. Bis(N-succinimido)-11,11'-dithiobis (undecyl succinate) (DSNHS) was synthesized for use as a linker for immobilizing anti-CRP antibody (anti-CRP) onto the gold surface of a surface plasmon resonance (SPR) sensor chip. DSNHS formed self-assembled monolayer (SAM) on the gold surface. By use of an AFM tip, a pattern of ditch was engraved within the SAM of DSNHS, and anti-CRP was immobilized on the engraved SAM through replacement of N-hydroxysuccinimide group on the outside surface of DSNHS by the amine group of anti-CRP. Formation of CRP/anti-CRP complex on the gold surface of SPR sensor chip was clearly demonstrated by measuring SPR angle shift. A consecutive series of SAM, SAM/anti-CRP, and SAM/anti-CRP/CRP complexes was generated on a SPR sensor chip, and the changes in depth of the ditch were monitored by taking AFM images of the complexes. Comparative analysis of the depth differences indicates that binding of CRP to anti-CRP occurs in a planar mode

  14. Changes in the NDVI of Boreal Forests over the period 1984 to 2003 measured using time series of Landsat TM/ETM+ surface reflectance and the GIMMS AVHRR NDVI record.

    Science.gov (United States)

    McMillan, A. M.; Rocha, A. V.; Goulden, M. L.

    2006-12-01

    There is a prevailing opinion that the boreal landscape is undergoing change as a result of warming temperatures leading to earlier springs, greater forest fire frequency and possibly CO2 fertilization. One widely- used line of evidence is the GIMMS AVHRR NDVI record. Several studies suggest increasing rates of photosynthesis in boreal forests from 1982 to 1991 (based on NDVI increases) while others suggest declining photosynthesis from 1996 to 2003. We suspect that a portion of these changes are due to the successional stage of the forests. We compiled a time-series of atmospherically-corrected Landsat TM/ETM+ images spanning the period 1984 to 2003 over the BOREAS Northern Study Area and compared spatial and temporal patterns of NDVI between the two records. The Landsat time series is higher resolution and, together with the Canadian Fire Service Large Fire Database, provides stand-age information. We then (1) analyzed the agreement between the Landsat and GIMMS AVHRR time series; (2) determined how the stage of forest succession affected NDVI; (3) assessed how the calculation method of annual averages of NDVI affects decadal-scale trends. The agreement between the Landsat and the AVHRR was reasonable although the depression of NDVI associated with the aerosols from the Pinatubo volcano was greater in the GIMMS time series. Pixels containing high proportions of stands burned within a decade of the observation period showed very high gains in NDVI while the more mature stands were constant. While NDVI appears to exhibit a large sensitivity to the presence of snow, the choice of a May to September averaging period for NDVI over a June to August averaging period did not affect the interannual patterns in NDVI at this location because the snow pack was seldom present in either of these periods. Knowledge of the spatial and temporal patterns of wild fire will prove useful in interpreting trends of remotely-sensed proxies of photosynthesis.

  15. Characteristics of a single-channel superconducting flux flow transistor fabricated by an AFM modification technique

    Energy Technology Data Exchange (ETDEWEB)

    Ko, Seokcheol [Jeonnam Regional Innovation Agency, 1000 Namak-Ri, Samhyang-Myun, Muan-Gun, Jeollanam-Do 534-700 (Korea, Republic of)], E-mail: suntrac@jina.re.kr; Kim, Seong-Jong [Mokpo Maritime University, Chukkyo-Dong, Mokpo City, Cheonnam 530-729 (Korea, Republic of)

    2007-11-01

    The demand for high performance, integrity, and miniaturization in the area of electronic and mechanic devices has drawn interest in the fabrication of nanostructures. However, it is difficult to fabricate the channel with nano-scale using a conventional photography techniques. AFM anodization technique is a maskless process and effective method to overcome the difficulty in fabricating a nano-scale channel. In this paper, we first present a new fabrication of a single-channel SFFT using a selective oxidation process induced by an AFM probe. The modified channel was investigated by electron probe microanalyzer (EPMA) to find the compositional variation of the transformed region. In order to confirm the operation of a single-channel SFFT, we measured the voltage-current characteristics at the temperature of liquid nitrogen by an I-V automatic measurement system. Our results indicate that the single-channel SFFT having effect as a weak link is effectively fabricated by an AFM lithography process.

  16. Characteristics of a single-channel superconducting flux flow transistor fabricated by an AFM modification technique

    International Nuclear Information System (INIS)

    Ko, Seokcheol; Kim, Seong-Jong

    2007-01-01

    The demand for high performance, integrity, and miniaturization in the area of electronic and mechanic devices has drawn interest in the fabrication of nanostructures. However, it is difficult to fabricate the channel with nano-scale using a conventional photography techniques. AFM anodization technique is a maskless process and effective method to overcome the difficulty in fabricating a nano-scale channel. In this paper, we first present a new fabrication of a single-channel SFFT using a selective oxidation process induced by an AFM probe. The modified channel was investigated by electron probe microanalyzer (EPMA) to find the compositional variation of the transformed region. In order to confirm the operation of a single-channel SFFT, we measured the voltage-current characteristics at the temperature of liquid nitrogen by an I-V automatic measurement system. Our results indicate that the single-channel SFFT having effect as a weak link is effectively fabricated by an AFM lithography process

  17. Towards easy and reliable AFM tip shape determination using blind tip reconstruction

    International Nuclear Information System (INIS)

    Flater, Erin E.; Zacharakis-Jutz, George E.; Dumba, Braulio G.; White, Isaac A.; Clifford, Charles A.

    2014-01-01

    Quantitative determination of the geometry of an atomic force microscope (AFM) probe tip is critical for robust measurements of the nanoscale properties of surfaces, including accurate measurement of sample features and quantification of tribological characteristics. Blind tip reconstruction, which determines tip shape from an AFM image scan without knowledge of tip or sample shape, was established most notably by Villarrubia [J. Res. Natl. Inst. Stand. Tech. 102 (1997)] and has been further developed since that time. Nevertheless, the implementation of blind tip reconstruction for the general user to produce reliable and consistent estimates of tip shape has been hindered due to ambiguity about how to choose the key input parameters, such as tip matrix size and threshold value, which strongly impact the results of the tip reconstruction. These key parameters are investigated here via Villarrubia's blind tip reconstruction algorithms in which we have added the capability for users to systematically vary the key tip reconstruction parameters, evaluate the set of possible tip reconstructions, and determine the optimal tip reconstruction for a given sample. We demonstrate the capabilities of these algorithms through analysis of a set of simulated AFM images and provide practical guidelines for users of the blind tip reconstruction method. We present a reliable method to choose the threshold parameter corresponding to an optimal reconstructed tip shape for a given image. Specifically, we show that the trend in how the reconstructed tip shape varies with threshold number is so regular that the optimal, or Goldilocks, threshold value corresponds with the peak in the derivative of the RMS difference with respect to the zero threshold curve vs. threshold number. - Highlights: • Blind tip reconstruction algorithms have been implemented and augmented to determine the optimal input parameters. • We demonstrate the capabilities of the algorithms using a simulated AFM

  18. Object Permanence in 3 1/2- and 4 1/2-Month-Old Infants.

    Science.gov (United States)

    Baillargeon, Renee

    1987-01-01

    Three experiments test object permanenece in 3 1/2- and 4 1/2-month-old infants, and use an impossible-possible-habituation event format. The 4 1/2-month-olds, and the 3 1/2-month-olds who were fast habituators, look reliably longer at the impossible than at the possible event. Results seriously question Piaget's (1954) claims regarding the age at…

  19. The substructure of immunoglobulin G resolved to 25 kDa using amplitude modulation AFM in air

    International Nuclear Information System (INIS)

    Thomson, Neil H.

    2005-01-01

    Amplitude modulation (or tapping-mode) atomic force microscopy (AM AFM or TM AFM) in air can reveal sub-molecular details of isolated multi-subunit proteins, such as immunoglobulin G (IgG) antibodies, on atomically flat support surfaces such as mica [A. San Paulo, R. Garcia, Biophys. J. 78(3) (2000) 1599]. This is achieved by controlling the microscope imaging parameters (e.g. cantilever drive frequency and set-point amplitude) to keep the AFM tip predominantly in the attractive force regime. Under these conditions, the 50 kDa F c and F ab subunits can be resolved when the molecule has the appropriate orientation on the surface. The presence of a water layer on hydrophilic mica is an important factor affecting imaging contrast, a consequence of capillary neck formation between tip and surface [L. Zitzler, S. Herminghaus, F. Mugele, Phys. Rev. B 66(15) (2002) 155436]. Desiccation of samples to remove surface bound water layers can yield reproducible imaging of the IgG substructure [N.H. Thomson, J. Microsc. (Oxford) 217(3) (2004) 193]. This approach has also given higher resolution than previously achieved, down to about 25 kDa, and these data are detailed here. These subdomains are formed as two immunoglobulin folds from the light and heavy peptide chains of the IgG crossover. This result has been validated by comparing the AFM images with X-ray crystallography data from the protein data bank. These data show that the AFM can obtain 25 kDa resolution on isolated protein molecules with commercially available silicon tips, but, as expected for a local probe technique, resolution is highly dependent on the macromolecular orientation on the support surface

  20. Enhancing local absorption within a gold nano-sphere on a dielectric surface under an AFM probe

    International Nuclear Information System (INIS)

    Talebi Moghaddam, Sina; Ertürk, Hakan; Mengüç, M. Pınar

    2016-01-01

    This study considers enhancing localized absorption by a gold nanoparticle (NP) placed over a substrate where an atomic force microscope (AFM) tip is in close proximity of the particle. The gold NP and AFM tip are interacting with a surface evanescent wave, resulting a near-field coupling between the tip and NP and consequently enhances the absorption. This concept can be used for selective heating of NPs placed over a surface that enables precise manufacturing at nanometer scales. Different tip positions are considered to identify the optimal tip location and the corresponding enhancement limits. The effects of these interactions on the absorption profiles of dielectric core/gold shell NPs are also studied. It is observed that using core–shell nanoparticles with a dielectric core leads to further enhancement of the absorption efficiency and a more uniform distribution of absorption over the shell. Discrete dipole approximation coupled with surface interactions (DDA-SI) is employed throughout the study, and it is vectorized to improve its computational efficiency. - Highlights: • Plasmonic coupling between solid or core-shell nanoparticles, dielectric surface and Si AFM tip is investigated for achieving localized heating for nano-manufacturing. • Absorption efficiency enhancement limits for core-shell and solid nanoparticles are identified using an AFM tip for surface evanescent wave heating. • The effect of tip location, relative to surface wave direction is outlined, identifying optimal locations, and heat absorption distribution over core-shell and solid nanoparticles. • While using a Si AFM tip enhances absorption, using a dielectric core result in further enhancement in absorption with a more uniform distribution. • DDA-SI-v developed by vectorizing the formulations of DDA-SI for improved computational efficiency.

  1. Resonance frequencies of AFM cantilevers in contact with a surface

    Energy Technology Data Exchange (ETDEWEB)

    Verbiest, G.J., E-mail: Verbiest@physik.rwth-aachen.de [JARA-FIT and II. Institute of Physics, RWTH Aachen University, 52074 Aachen (Germany); Rost, M.J., E-mail: Rost@physics.leidenuniv.nl [Huygens-Kamerlingh Onnes Laboratory, Leiden University, P.O. Box 9504, 2300 RA Leiden (Netherlands)

    2016-12-15

    To make the forces in an Atomic Force Microscope that operates in a dynamic mode with one or multiple vibrations applied to the cantilever, quantitative, one needs to relate a change in resonance frequency of the cantilever to a specific tip–sample interaction. Due to the time dependence of the force between the tip and sample caused by the vibrations, this task is not only difficult, but in fact only possible to solve for certain limiting cases, if one follows common theoretical approaches with a Taylor expansion around the deflection point. Here, we present an analytical method for calculating the resonance frequencies of the cantilever that is valid for any tip–sample interaction. Instead of linearizing the tip–sample interaction locally, we calculate an averaged, weighted linearization taking into account all positions of the tip while vibrating. Our method bridges, therefore, the difficult gap between a free oscillating cantilever and a cantilever that is pushed infinitely hard into contact with a surface, which describes a clamped-pinned boundary condition. For a correct description of the cantilever dynamics, we take into account both the tip mass and the tip moment of inertia. Applying our model, we show that it is possible to calculate the modal response of a cantilever as a function of the tip–sample interaction strength. Based on these modal vibration characteristics, we show that the higher resonance frequencies of a cantilever are completely insensitive to the strength of the tip–sample interaction. - Highlights: • A method to calculate the resonances of AFM cantilevers under any force is proposed. • The analytical model is based on Euler-beam theory. • The shift in resonance frequency due to forces decrease with increasing mode number. • The proposed method enables quantitative ultrasound AFM experiments. • Our results explain also the applicability of the higher modes in SubSurface-AFM.

  2. Projection of the change in future extremes over Japan using a cloud-resolving model: (2) Precipitation Extremes and the results of the NHM-1km experiments

    Science.gov (United States)

    Kanada, S.; Nakano, M.; Nakamura, M.; Hayashi, S.; Kato, T.; Kurihara, K.; Sasaki, H.; Uchiyama, T.; Aranami, K.; Honda, Y.; Kitoh, A.

    2008-12-01

    In order to study changes in the regional climate in the vicinity of Japan during the summer rainy season due to global warming, experiments by a semi-cloud resolving non-hydrostatic model with a horizontal resolution of 5km (NHM-5km) have been conducted from June to October by nesting within the results of the 10-year time-integrated experiments using a hydrostatic atmospheric general circulation model with a horizontal grid of 20 km (AGCM-20km: TL959L60) for the present and future up to the year 2100. A non-hydrostatic model developed by the Japan Meteorological Agency (JMA) (JMA-NHM; Saito et al. 2001, 2006) was adopted. Detailed descriptions of the NHM-5km are shown by the poster of Nakano et al. Our results show that rainy days over most of the Japanese Islands will decrease in June and July and increase in August and September in the future climate. Especially, remarkable increases in intense precipitations such as larger than 150 - 300 mm/day are projected from the present to future climate. The 90th percentiles of regional largest values among maximum daily precipitations (R-MDPs) grow 156 to 207 mm/day in the present and future climates, respectively. It is well-known that the horizontal distribution of precipitation, especially the heavy rainfall in the vicinity of Japan, much depends on the topography. Therefore, higher resolution experiments by a cloud-resolving model with a horizontal resolution of 1km (NHM-1km) are one-way nested within the results of NHM-5km. The basic frame and design of the NHM-1km is the same as those of the NHM-5km, but the topography is finer and no cumulus parameterization is used in the NHM-1km experiments. The NHM-1km, which treats the convection and cloud microphysics explicitly, can represent not only horizontal distributions of rainfall in detail but also the 3-dimensional structures of meso-beta-scale convective systems (MCSs). Because of the limitation of computation resources, only heavy rainfall events that rank in top

  3. AFM Morphology Study of Si1-Y GeY:H Films Deposited by LF PE CVD from Silane-Germane with Different

    International Nuclear Information System (INIS)

    Sanchez, L; Kosarev, A

    2005-01-01

    The morphology of Si 1-Y Ge Y :H films in the range of Y=0.23 to 0.9 has been studied by AFM. The films were deposited by Low Frequency (LF) PE CVD at substrate temperature T s =300 C and discharge frequency f=110 kHz from silane+germane mixture with and without, Ar and H 2 dilution. The films were deposited on silicon and glass substrates. AFM images were taken and analyzed for 2 x 2 mm 2 area. All the images demonstrated ''grain'' like structure, which was characterized by the height distribution function F(H) average roughness , standard height deviation Rq, lateral correlation length L c area distribution function F(s), mean grain area , diameter distribution function F(d), and mean grain diameter . The roughness of the films monotonically increases with Y for all dilutions, but more significantly in the films deposited without dilution. L c continuously grows with Y in the films deposited without dilution, while more complex behavior L c (Y) is observed in the films deposited with H- or Ar dilution. The sharpness of F(H) characterized by curtosis γ depends on dilution and the sharpest F(H) are for the films deposited with Ar (γ=5.30,Y=0.23) and without dilution (γ=4.3, Y=0.45). Isothermal annealing caused increase of , L c in the films deposited with H- and Ar dilutions, while in the films prepared without dilution the behavior was more complex, depending on the substrates. Significant narrowing of the height distribution was observed in the films deposited with H dilution or without dilution

  4. 1-Pb/s (32 SDM/46 WDM/768 Gb/s) C-band Dense SDM Transmission over 205.6-km of Single-mode Heterogeneous Multi-core Fiber using 96-Gbaud PDM-16QAM Channels

    DEFF Research Database (Denmark)

    Kobayashi, Takayuki; Nakamura, M.; Hamaoka, F.

    2017-01-01

    We demonstrate the first 1-Pb/s unidirectional inline-amplified transmission over 205.6-km of single-mode 32-core fiber within C-band only. 96-Gbaud LDPC-coded PDM-16QAM channels with FEC redundancy of 12.75% realize high-aggregate spectral efficiency of 217.6 b/s/Hz...

  5. Aplicação de índices das condições de vegetação no monitoramento em tempo quase real da seca em Moçambique usando NOAA_AVHRR- NDVI

    Directory of Open Access Journals (Sweden)

    Paulo Alberto Covele

    2011-12-01

    Full Text Available Este artigo tem por objetivo aplicar diferentes índices das condições de vegetação e avaliar suas diferenças e aptidão no monitoramento da distribuição espacial e temporal da seca em Moçambique com base em imagens NDVI da NOAA- AVHRR. Para tanto, avalia as differenças de aptidão dos índices das condições de vegetação especialmente o Índice das Condições de Vegetação (Vegetation Condition Index- VCI, Índice Padronizado de Vegetação (Standardized Vegetation Index- SVI e o Indicador de Productividade da Vegetação (Vegetation Productivity Indicator- VPI no monitoramento da seca em Moçambique. Estes índices são derivados a partir de imagens da Diferença Normalizada do Índice da Vegetação (Normalized Difference Vegetation Index- NDVI de 1981 a 2005, produzidas a partir dos canais 1 e 2 do sensor Advanced Very Higher Resolution Radiometer (AVHRR a bordo dos satélites da National Oceanic and Atmospheric Administration (NOAA.

  6. Carbon nanotube/carbon nanotube composite AFM probes prepared using ion flux molding

    Science.gov (United States)

    Chesmore, Grace; Roque, Carrollyn; Barber, Richard

    The performance of carbon nanotube-carbon nanotube composite (CNT/CNT composite) atomic force microscopy (AFM) probes is compared to that of conventional Si probes in AFM tapping mode. The ion flux molding (IFM) process, aiming an ion beam at the CNT probe, aligns the tip to a desired angle. The result is a relatively rigid tip that is oriented to offset the cantilever angle. Scans using these probes reveal an improvement in image accuracy over conventional tips, while allowing higher aspect ratio imaging of 3D surface features. Furthermore, the lifetimes of CNT-CNT composite tips are observed to be longer than both conventional tips and those claimed for other CNT technologies. Novel applications include the imaging of embiid silk. Supported by the Clare Boothe Luce Research Scholars Award and Carbon Design Innovations.

  7. KM-Appunti : 5. KM e "nuova" logica

    OpenAIRE

    Bogliolo, Domenico

    2002-01-01

    Paolo Bisogno leaved many tracks that must be catalogued. One of his research paths, Knowledge Management, is a sort of “Science of knowledge organization” if we decide to join the idea of knowledge with practical, managerial and directional components. We will try to outline here an operative and epistemologic layout of knowledge modelling and categorizing, helping us in understanding new knowledge boundaries of KM.

  8. Design and performance simulation of 532 nm Rayleigh-Mie Doppler lidar system for 5-50 km wind measurement

    Science.gov (United States)

    Shen, Fahua; Wang, Bangxin; Shi, Wenjuan; Zhuang, Peng; Zhu, Chengyun; Xie, Chenbo

    2018-04-01

    A novel design of the 532 nm Rayleigh-Mie Doppler lidar receiving system is carried out. The use of polarization isolation technology to effectively improve the receiving system optical reception efficiency, suppress the background noise, not only improves the system wind field detection accuracy, while achieving a high-accuracy temperature measurement. The wind speed and temperature measurement principle of the system are discussed in detail, and the triple Fabry-Perot etalon parameters are optimized. Utilizing the overall design parameters of the system, the system detection performance is simulated. The simulation results show that from 5 to 50 km altitude with vertical resolution of 0.1 km@5 ∼20 km, 0.5 km@20 ∼40 km, 1 km@40 ∼50 km, by using the laser with single pulse energy of 600 mJ, repetition frequency of 50 Hz and the receiving telescope with aperture of 0.8 m, with 2min integration time and in ±50 m/s radial wind speed range, the radial wind speed measurement accuracies of our designed lidar in the day and night are better than 2.6 m/s and 0.9 m/s respectively, and its performance is obviously superior to that of traditional system 5.6 m/s and 1.4 m/s wind speed accuracies; with 10min integration time and in 210 ∼280 K temperature range, the temperature measurement accuracies of the system in the day and night are better than 3.4 K and 1.2 K respectively; since the wind speed sensitivities of the Mie and Rayleigh scattering signals are not exactly the same, in ±50 m/s radial wind speed range, the wind speed bias induced by Mie signal is less than 1 m/s in the temperature range of 210-290 K and in the backscatter ratio range of 1-1.5 for pair measurement.

  9. Substrate interactions in dehalogenation of 1,2-dichloroethane, 1,2-dichloropropane, and 1,1,2-trichloroethane mixtures by Dehalogenimonas spp.

    Science.gov (United States)

    Dillehay, Jacob L; Bowman, Kimberly S; Yan, Jun; Rainey, Fred A; Moe, William M

    2014-04-01

    When chlorinated alkanes are present as soil or groundwater pollutants, they often occur in mixtures. This study evaluated substrate interactions during the anaerobic reductive dehalogenation of chlorinated alkanes by the type strains of two Dehalogenimonas species, D. lykanthroporepellens and D. alkenigignens. Four contaminant mixtures comprised of combinations of the chlorinated solvents 1,2-dichloroethane (1,2-DCA), 1,2-dichloropropane (1,2-DCP), and 1,1,2-trichloroethane (1,1,2-TCA) were assessed for each species. Chlorinated solvent depletion and daughter product formation determined as a function of time following inoculation into anaerobic media revealed preferential dechlorination of 1,1,2-TCA over both 1,2-DCA and 1,2-DCP for both species. 1,2-DCA in particular was not dechlorinated until 1,1,2-TCA reached low concentrations. In contrast, both species concurrently dechlorinated 1,2-DCA and 1,2-DCP over a comparably large concentration range. This is the first report of substrate interactions during chlorinated alkane dehalogenation by pure cultures, and the results provide insights into the chlorinated alkane transformation processes that may be expected for contaminant mixtures in environments where Dehalogenimonas spp. are present.

  10. A surface evolution scheme to identify nanoscale intrinsic geometry from AFM experimental data

    International Nuclear Information System (INIS)

    Jang, Hong-Lae; Kim, Hyun-Seok; Park, Youmie; Cho, Seonho

    2013-01-01

    The geometrical properties of metallic nanoparticles such as the size and morphology have significant impacts on the structure and stability of the adsorbed biological entities as well as the nanoscale structural performances. To identify the nanoscale intrinsic geometry from the height images by atomic force microscopy (AFM), we developed a curvature-dependent evolution scheme that can eliminate the noise and smoothen the surfaces. The principal curvatures are computed directly from the first and second derivatives of the discrete AFM height data. The principal curvatures and directions correspond to the eigenvalues and eigenvectors of shape operator matrix, respectively. The evolution equation using the principal curvature flows smoothens the images in the corresponding principal directions. For an idealized model, κ 2 flow successfully identifies the major valley lines to represent the boundary of nanoparticles without referring to the phase information, whereas the mean curvature flow eliminates all the minor ones leaving only the major feature of the boundary. To demonstrate the capability of noise removal, smoothing surfaces, the identification of ridge and valley lines, and the extraction of intrinsic geometry, the developed numerical scheme is applied to real AFM data that include the silver nanoparticles of 24 nm diameter and the gold nanoparticles of 33–56 nm diameters

  11. The proportion of excessive fast-food consumption attributable to the neighbourhood food environment among youth living within 1 km of their school.

    Science.gov (United States)

    Laxer, Rachel E; Janssen, Ian

    2014-04-01

    The study objective was to estimate the proportion of excessive fast-food consumption by youth that is attributable to living and attending school in a neighbourhood with a moderate or high density of fast-food restaurants. This was a cross-sectional study of 6099 Canadian youths (aged 11-15 years) from 255 school neighbourhoods. All participants lived within 1 km of their school. The density of chain fast-food restaurants within a 1-km circular buffer surrounding each school was determined using geographic information systems. Excessive fast-food consumption (≥2 times per week) was assessed by questionnaire. Multilevel logistic regression analysis was used to examine associations. The population attributable risk estimates of excessive fast-food consumption due to neighbourhood exposure to fast-food restaurants were determined based on the prevalence of exposure and the results from the logistic regression. Eight percent of participants were excessive fast-food consumers. After adjusting for sociodemographic factors (i.e., gender, race, and socioeconomic status), it was found that youths from neighbourhoods with a moderate (odds ratio (OR), 1.68; 95% confidence interval (CI), 1.11-2.54) or high (OR 1.70; 95% CI 1.12-2.56) density of chain fast-food restaurants were more likely to be excessive fast-food consumers than were youths from neighbourhoods with no chain fast-food restaurants. Approximately 31% of excessive consumption was attributable to living in neighbourhoods with a moderate or high density of fast-food restaurants. Thus, the fast-food retail environment within which youth live and go to school is an important contributor to their eating behaviours.

  12. Hypervelocity launch capabilities to over 10 km/s

    International Nuclear Information System (INIS)

    Chhabildas, L.C.

    1991-01-01

    Very high pressure and acceleration is necessary to launch flier plates to hypervelocities. In addition, the high pressure loading must be uniform, structured, and shockless, i.e., time-dependent to prevent the flier plate from either fracturing or melting. In this paper, a novel technique is described which allows the use of megabar level loading pressures, and 10 9 g acceleration to launch intact flier plates to velocities of 12.2 km/s. 32 refs., 2 figs

  13. Protective effect of kombucha mushroom (KM) tea on phenol-induced cytotoxicity in albino mice.

    Science.gov (United States)

    Yapar, Kursad; Cavusoglu, Kultigin; Oruc, Ertan; Yalcin, Emine

    2010-09-01

    The present study was carried out to evaluate the protective role of kombucha mushroom (KM) tea on cytotoxicity induced by phenol (PHE) in mice. We used weight gain and micronucleus (MN) frequency as indicators of cytotoxicity and supported these parameters with pathological findings. The animals were randomly divided into seven groups: (Group I) only tap water (Group II) 1000 microl kg(-1) b. wt KM-tea, (Group III) 35 mg kg(-1) body wt. PHE (Group IV) 35 mg kg(-1) body wt. PHE + 250 microl kg(-1) b. wt KM-tea (Group V) 35 mg kg(-1) b. wt PHE + 500 microl kg(-1) b. wt KM-tea (Group VI) 35 mg kg(-1) b. wt PHE + 750 microl kg(-1) b. wt KM-tea, (Group VII) 35 mg kg(-1) b. wt PHE + 1000 microl kg(-1) b. wt KM-tea, for 20 consecutive days by oral gavage. The results indicated that all KM-tea supplemented mice showed a lower MN frequency than erythrocytes in only PHE-treated group. There was an observable regression on account of lesions in tissues of mice supplemented with different doses of KM-tea in histopathological observations. In conclusion, the KM-tea supplementation decreases cytotoxicity induced by PHE and its protective role is dose-dependent.

  14. The 12.1 ka Middle Toluca Pumice: A dacitic Plinian subplinian eruption of Nevado de Toluca in Central Mexico

    Science.gov (United States)

    Arce, J. L.; Cervantes, K. E.; Macías, J. L.; Mora, J. C.

    2005-10-01

    The Nevado de Toluca volcano erupted explosively approximately 12.1 ka ago, producing a Plinian-subplinian eruption that deposited the Middle Toluca Pumice (MTP). The MTP consists of white and gray juvenile pumice, gray dense juvenile lapilli, and red altered lithic lapilli. The pumice is dacitic (63.54-65.06 wt.% SiO 2) with phenocrysts of plagioclase > orthopyroxene > hornblende ± ilmenite and titanomagnetite, and biotite xenocrysts set in a groundmass of rhyolitic glass (70-71 wt.% SiO 2). The MTP has a dispersal axis to the ESE covering an area of 92 km 2, with a minimum volume of 1.8 km 3 (DRE). Stratigraphic relations, grain size, componentry, and vesicularity analyses suggest that the eruption occurred in five major phases: (1) an opening magmatic phase that generated a 20-km-high Plinian column dispersed to the SE; (2) a hydromagmatic explosion followed with the establishment of a subplinian eruptive column (18-19 km high) dispersed tephra to the SE and gradually waned; (3) hydromagmatic explosions emplaced dilute pyroclastic density currents followed by the formation of an eruptive column of unknown height; (4) immediately after, a new magmatic explosion established another eruptive column; and (5) the collapse of the latter column generated two pumiceous pyroclastic density currents that were fully dilute proximally, but transformed into two granular-fluid pyroclastic currents that traveled 19 km from the source.

  15. AFM study of growth of Bi2Sr2-xLaxCuO6 thin films

    International Nuclear Information System (INIS)

    Haitao Yang; Hongjie Tao; Yingzi Zhang; Duogui Yang; Lin Li; Zhongxian Zhao

    1997-01-01

    c-axis-oriented Bi 2 Sr 1.6 La 0.4 CuO 6 thin films deposited on flat planes of (100)SrTiO 3 , (100)LaAlO 3 and (100)MgO substrates and vicinal planes (off-angle ∼ 6 deg.) of SrTiO 3 substrates by RF magnetron sputtering were studied by atomic force microscopy (AFM). T c of these films reached 29 K. Film thickness ranged from 15 nm to 600 nm. Two typical growth modes have been observed. AFM images of thin films on flat planes of substrates showed a terraced-island growth mode. By contrast, Bi-2201 thin films on vicinal planes of substrates showed a step-flow growth mode. The growth unit is a half-unit-cell in the c-axis for both growth modes. No example of spiral growth, which was thought to be the typical structure of YBCO thin films, was found in either of these kinds of thin films. (author)

  16. Exploring the Mediation Between KM Infrastructure Capabilities and Organisational Performance: The Penetration of Learning by KM Practices

    OpenAIRE

    Meng-Lin Shih; Shu-Hui Chuang; Chechen Liao

    2009-01-01

    Previous studies have examined the relationship between knowledge management (KM) infrastructure capabilities and organisational performance. However, most studies neglect the mediating effect of organisational learning by KM practices (OLKMP) in the relationship between KM infrastructure capabilities and organisational performance. This study uses the survey method to discuss the relationships governing KM infrastructure capabilities, OLKMP and organisational performance. Results of the anal...

  17. Design of a micro-cartridge system for the robotic assembly of exchangeable AFM-probe tips

    DEFF Research Database (Denmark)

    Bartenwerfer, Malte; Eichhorn, Volkmar; Fatikow, Sergej

    2013-01-01

    demand an even higher lateral resolution of the measurements. The atomic force microscope (AFM) is a common tool for this characterization and a standard instrument for all kinds of research and development disciplines. However, the characterization of three dimensional high-aspect ratio and sidewall...... structures remains a hardly accomplishable task. Novel exchangeable and customizable scanning probe tips, so-called NanoBits, can be attached to standard AFM cantilevers offering unprecedented freedom in adapting the shape and size of the tips to the surface topology of the specific application. The ultimate...

  18. Determining the mechanical properties of electrospun poly-ε-caprolactone (PCL) nanofibers using AFM and a novel fiber anchoring technique

    Energy Technology Data Exchange (ETDEWEB)

    Baker, Stephen R.; Banerjee, Soham; Bonin, Keith; Guthold, Martin, E-mail: gutholdm@wfu.edu

    2016-02-01

    Due to its low cost, biocompatibility and slow bioresorption, poly-ε-caprolactone (PCL) continues to be a suitable material for select biomedical engineering applications. We used a combined atomic force microscopy (AFM)/optical microscopy technique to determine key mechanical properties of individual electrospun PCL nanofibers with diameters between 440–1040 nm. Compared to protein nanofibers, PCL nanofibers showed much lower adhesion, as they slipped on the substrate when mechanically manipulated. We, therefore, first developed a novel technique to anchor individual PCL nanofibers to micrometer-sized ridges on a substrate, and then mechanically tested anchored nanofibers. When held at constant strain, tensile stress relaxed with fast and slow relaxation times of 1.0 ± 0.3 s and 8.8 ± 3.1 s, respectively. The total tensile modulus was 62 ± 26 MPa, the elastic (non-relaxing) component of the tensile modulus was 53 ± 36 MPa. Individual PCL fibers could be stretched elastically (without permanent deformation) to strains of 19–23%. PCL nanofibers are rather extensible; they could be stretched to a strain of at least 98%, and a tensile strength of at least 12 MPa, before they slipped off the AFM tip. PCL nanofibers that had aged for over a month at ambient conditions became stiffer and less elastic. Our technique provides accurate nanofiber mechanical data, which are needed to guide construction of scaffolds for cells and other biomedical devices. - Highlights: • Developed technique to anchor single nanofibers on microridges • Determined mechanical properties of e-spun PCL fibers • E-spun PCL fibers have similar mechanical properties as wet fibrin fibers. • E-spun PCL fiber total elastic modulus is ~ 60 MPa. • E-spun PCL fiber extensibility is > 100%.

  19. Surface features on Sahara soil dust particles made visible by atomic force microscope (AFM) phase images

    OpenAIRE

    G. Helas; M. O. Andreae

    2008-01-01

    We show that atomic force microscopy (AFM) phase images can reveal surface features of soil dust particles, which are not evident using other microscopic methods. The non-contact AFM method is able to resolve topographical structures in the nanometer range as well as to uncover repulsive atomic forces and attractive van der Waals' forces, and thus gives insight to surface properties. Though the method does not allow quantitative assignment in terms of chemical compound description, it clearly...

  20. Fabrication and buckling dynamics of nanoneedle AFM probes

    Energy Technology Data Exchange (ETDEWEB)

    Beard, J D; Gordeev, S N, E-mail: jdb28@bath.ac.uk [Department of Physics, University of Bath, Claverton Down, Bath BA2 7AY (United Kingdom)

    2011-04-29

    A new method for the fabrication of high-aspect-ratio probes by electron beam induced deposition is described. This technique allows the fabrication of cylindrical 'nanoneedle' structures on the atomic force microscope (AFM) probe tip which can be used for accurate imaging of surfaces with high steep features. Scanning electron microscope (SEM) imaging showed that needles with diameters in the range of 18-100 nm could be obtained by this technique. The needles were shown to undergo buckling deformation under large tip-sample forces. The deformation was observed to recover elastically under vertical deformations of up to {approx} 60% of the needle length, preventing damage to the needle. A technique of stabilizing the needle against buckling by coating it with additional electron beam deposited carbon was also investigated; it was shown that coated needles of 75 nm or greater total diameter did not buckle even under tip-sample forces of {approx} 1.5 {mu}N.

  1. Validation of Cloud Parameters Derived from Geostationary Satellites, AVHRR, MODIS, and VIIRS Using SatCORPS Algorithms

    Science.gov (United States)

    Minnis, P.; Sun-Mack, S.; Bedka, K. M.; Yost, C. R.; Trepte, Q. Z.; Smith, W. L., Jr.; Painemal, D.; Chen, Y.; Palikonda, R.; Dong, X.; hide

    2016-01-01

    Validation is a key component of remote sensing that can take many different forms. The NASA LaRC Satellite ClOud and Radiative Property retrieval System (SatCORPS) is applied to many different imager datasets including those from the geostationary satellites, Meteosat, Himiwari-8, INSAT-3D, GOES, and MTSAT, as well as from the low-Earth orbiting satellite imagers, MODIS, AVHRR, and VIIRS. While each of these imagers have similar sets of channels with wavelengths near 0.65, 3.7, 11, and 12 micrometers, many differences among them can lead to discrepancies in the retrievals. These differences include spatial resolution, spectral response functions, viewing conditions, and calibrations, among others. Even when analyzed with nearly identical algorithms, it is necessary, because of those discrepancies, to validate the results from each imager separately in order to assess the uncertainties in the individual parameters. This paper presents comparisons of various SatCORPS-retrieved cloud parameters with independent measurements and retrievals from a variety of instruments. These include surface and space-based lidar and radar data from CALIPSO and CloudSat, respectively, to assess the cloud fraction, height, base, optical depth, and ice water path; satellite and surface microwave radiometers to evaluate cloud liquid water path; surface-based radiometers to evaluate optical depth and effective particle size; and airborne in-situ data to evaluate ice water content, effective particle size, and other parameters. The results of comparisons are compared and contrasted and the factors influencing the differences are discussed.

  2. The correlated k-distribution technique as applied to the AVHRR channels

    Science.gov (United States)

    Kratz, David P.

    1995-01-01

    Correlated k-distributions have been created to account for the molecular absorption found in the spectral ranges of the five Advanced Very High Resolution Radiometer (AVHRR) satellite channels. The production of the k-distributions was based upon an exponential-sum fitting of transmissions (ESFT) technique which was applied to reference line-by-line absorptance calculations. To account for the overlap of spectral features from different molecular species, the present routines made use of the multiplication transmissivity property which allows for considerable flexibility, especially when altering relative mixing ratios of the various molecular species. To determine the accuracy of the correlated k-distribution technique as compared to the line-by-line procedure, atmospheric flux and heating rate calculations were run for a wide variety of atmospheric conditions. For the atmospheric conditions taken into consideration, the correlated k-distribution technique has yielded results within about 0.5% for both the cases where the satellite spectral response functions were applied and where they were not. The correlated k-distribution's principal advantages is that it can be incorporated directly into multiple scattering routines that consider scattering as well as absorption by clouds and aerosol particles.

  3. A Novel Dog-Bone Oscillating AFM Probe with Thermal Actuation and Piezoresistive Detection †

    Science.gov (United States)

    Xiong, Zhuang; Mairiaux, Estelle; Walter, Benjamin; Faucher, Marc; Buchaillot, Lionel; Legrand, Bernard

    2014-01-01

    In order to effectively increase the resonance frequency and the quality factor of atomic force microscope (AFM) probes, a novel oscillating probe based on a dog-bone shaped MEMS resonator was conceived, designed, fabricated and evaluated. The novel probe with 400 μm in length, 100 μm in width and 5 μm in thickness was enabled to feature MHz resonance frequencies with integrated thermal actuation and piezoresistive detection. Standard silicon micromachining was employed. Both electrical and optical measurements were carried out in air. The resonance frequency and the quality factor of the novel probe were measured to be 5.4 MHz and 4000 respectively, which are much higher than those (about several hundreds of kHz) of commonly used cantilever probes. The probe was mounted onto a commercial AFM set-up through a dedicated probe-holder and circuit board. Topographic images of patterned resist samples were obtained. It is expected that the resonance frequency and the measurement bandwidth of such probes will be further increased by a proper downscaling, thus leading to a significant increase in the scanning speed capability of AFM instruments. PMID:25365463

  4. Neutron investigation of Ru-doped Nd1/2Ca1/2MnO3. Comparison with Cr-doped Nd1/2Ca1/2MnO3

    International Nuclear Information System (INIS)

    Moritomo, Yutaka; Nonobe, Toshihiko; Machida, Akihiko; Ohoyama, Kenji

    2002-01-01

    Lattice and magnetic properties are investigated for 3% Ru- and Cr-doped Nd 1/2 Ca 1/2 MnO 3 . The parent Nd 1/2 Ca 1/2 MnO 3 is a charge-ordered insulator (T CO =250K). With decreasing temperature below ≅210K, these compounds are separated into two perovskite phases, that is, the long-c and short-c phases. The long-c region shows a ferromagnetic transition at T C ≅210K for the Ru-doped compound and ≅130K for the Cr-doped compound, while the short-c region shows antiferromagnetic transition at T N ≅150K for Ru and ≅110K for Cr. We discuss the origin of the enhanced T C for the Ru-doped compound in terms of the effective one-electron bandwidth W of the e g -band. (author)

  5. Real-time TIRF observation of vinculin recruitment to stretched α-catenin by AFM.

    Science.gov (United States)

    Maki, Koichiro; Han, Sung-Woong; Hirano, Yoshinori; Yonemura, Shigenobu; Hakoshima, Toshio; Adachi, Taiji

    2018-01-25

    Adherens junctions (AJs) adaptively change their intensities in response to intercellular tension; therefore, they integrate tension generated by individual cells to drive multicellular dynamics, such as morphogenetic change in embryos. Under intercellular tension, α-catenin, which is a component protein of AJs, acts as a mechano-chemical transducer to recruit vinculin to promote actin remodeling. Although in vivo and in vitro studies have suggested that α-catenin-mediated mechanotransduction is a dynamic molecular process, which involves a conformational change of α-catenin under tension to expose a cryptic vinculin binding site, there are no suitable experimental methods to directly explore the process. Therefore, in this study, we developed a novel system by combining atomic force microscopy (AFM) and total internal reflection fluorescence (TIRF). In this system, α-catenin molecules (residues 276-634; the mechano-sensitive M 1 -M 3 domain), modified on coverslips, were stretched by AFM and their recruitment of Alexa-labeled full-length vinculin molecules, dissolved in solution, were observed simultaneously, in real time, using TIRF. We applied a physiologically possible range of tensions and extensions to α-catenin and directly observed its vinculin recruitment. Our new system could be used in the fields of mechanobiology and biophysics to explore functions of proteins under tension by coupling biomechanical and biochemical information.

  6. Is Biological Subtype Prognostic of Locoregional Recurrence Risk in Women With pT1-2N0 Breast Cancer Treated With Mastectomy?

    Energy Technology Data Exchange (ETDEWEB)

    Truong, Pauline T., E-mail: ptruong@bccancer.bc.ca [Radiation Therapy Program, British Columbia Cancer Agency, Vancouver Island Centre, University of British Columbia, Victoria, BC (Canada); Breast Cancer Outcomes Unit, British Columbia Cancer Agency, Vancouver Island Centre, University of British Columbia, Victoria, BC (Canada); Sadek, Betro T. [Department of Radiation Oncology, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts (United States); Lesperance, Maria F. [Radiation Therapy Program, British Columbia Cancer Agency, Vancouver Island Centre, University of British Columbia, Victoria, BC (Canada); Alexander, Cheryl S. [Breast Cancer Outcomes Unit, British Columbia Cancer Agency, Vancouver Island Centre, University of British Columbia, Victoria, BC (Canada); Shenouda, Mina; Raad, Rita Abi; Taghian, Alphonse G. [Department of Radiation Oncology, Massachusetts General Hospital, Harvard Medical School, Boston, Massachusetts (United States)

    2014-01-01

    Purpose: To examine locoregional and distant recurrence (LRR and DR) in women with pT1-2N0 breast cancer according to approximated subtype and clinicopathologic characteristics. Methods and Materials: Two independent datasets were pooled and analyzed. The study participants were 1994 patients with pT1-2N0M0 breast cancer, treated with mastectomy without radiation therapy. The patients were classified into 1 of 5 subtypes: luminal A (ER+ or PR+/HER 2−/grade 1-2, n=1202); luminal B (ER+ or PR+/HER 2−/grade 3, n=294); luminal HER 2 (ER+ or PR+/HER 2+, n=221); HER 2 (ER−/PR−/HER 2+, n=105) and triple-negative breast cancer (TNBC) (ER−/PR−/HER 2−, n=172). Results: The median follow-up time was 4.3 years. The 5-year Kaplan-Meier (KM) LRR were 1.8% in luminal A, 3.1% in luminal B, 1.7% in luminal HER 2, 1.9% in HER 2, and 1.9% in TNBC cohorts (P=.81). The 5-year KM DR was highest among women with TNBC: 1.8% in luminal A, 5.0% in luminal B, 2.4% in luminal HER 2, 1.1% in HER 2, and 9.6% in TNBC cohorts (P<.001). Among 172 women with TNBC, the 5-year KM LRR were 1.3% with clear margins versus 12.5% with close or positive margins (P=.04). On multivariable analysis, factors that conferred higher LRR risk were tumors >2 cm, lobular histology, and close/positive surgical margins. Conclusions: The 5-year risk of LRR in our pT1-2N0 cohort treated with mastectomy was generally low, with no significant differences observed between approximated subtypes. Among the subtypes, TNBC conferred the highest risk of DR and an elevated risk of LRR in the presence of positive or close margins. Our data suggest that although subtype alone cannot be used as the sole criterion to offer postmastectomy radiation therapy, it may reasonably be considered in conjunction with other clinicopathologic factors including tumor size, histology, and margin status. Larger cohorts and longer follow-up times are needed to define which women with node-negative disease have high postmastectomy LRR

  7. AFM study of surface relief evolution in 316L steel fatigued at low and high temperatures

    Czech Academy of Sciences Publication Activity Database

    Man, Jiří; Valtr, B.; Weidner, A.; Petrenec, Martin; Obrtlík, Karel; Polák, Jaroslav

    2010-01-01

    Roč. 2, č. 1 (2010), s. 1625-1633 E-ISSN 1877-7058. [Fatigue 2010. Praha, 06.06.2010-11.06.2010] R&D Projects: GA ČR GAP108/10/2371; GA AV ČR 1QS200410502; GA ČR GA106/06/1096 Institutional research plan: CEZ:AV0Z20410507 Keywords : Fatigue crack initiation * 316L steel * Persistent slip band (PSB) * Extrusion * Intrusion * Atomic force microscopy (AFM) Subject RIV: JL - Materials Fatigue, Friction Mechanics

  8. Preliminary site description Simpevarp subarea - version 1.2

    Energy Technology Data Exchange (ETDEWEB)

    Winberg, Anders [ed.

    2005-04-01

    The objectives of the version 1.2 site descriptive modelling (SDM) of the Simpevarp subarea are to produce and document an integrated description of the site and its regional environments based on the site-specific data available from the initial site investigations and to give recommendations on continued investigations on a continuous basis. The modelling work is based on primary data available at the time of the data freeze for Simpevarp 1.2, April 1, 2004. The local scale model area (24 km{sup 2}) for the Simpevarp 1.2 modelling encompasses both the Simpevarp and Laxemar subareas. The local model area is located in the centre of a regional scale model area (273 km{sup 2}). Surface ecosystem models in terms of pools and fluxes of carbon have been developed for the terrestrial (e.g. plants and animals) and limnic (e.g. algae and fish) systems using the Lake Frisksjoen drainage area. Furthermore, a first marine ecosystem model has been developed for the Basin Borholmsfjaerden. Three principal lithological domains have been defined in the subarea, an A domain that is dominated by the Aevroe granite, a domain B that is dominated by the fine-grained dioritoid, a C domain that is characterised by a mixture of of Aevroe granite and quartz monzodiorite. A fourth domain is made up a few scattered domains of diorite to gabbro. In total, 22 deformation zones with high confidence of occurrence have been interpreted in the local scale model area. The understanding of the interpreted deformation zones of the Simpevarp subarea is considered adequate to make a preliminary assessment of available storage volumes for a deep repository. High rock stresses do not appear to be a major concern for the Simpevarp subarea. The magnitude of the maximum principal stress at 500 m in the Simpevarp subarea is estimated at 10-22 MPa. The analysis of the thermal conductivity has developed considerably since Simpevarp 1.1. In terms of interpreted mean values for the identified lithological

  9. Preliminary site description Simpevarp subarea - version 1.2

    International Nuclear Information System (INIS)

    Winberg, Anders

    2005-04-01

    The objectives of the version 1.2 site descriptive modelling (SDM) of the Simpevarp subarea are to produce and document an integrated description of the site and its regional environments based on the site-specific data available from the initial site investigations and to give recommendations on continued investigations on a continuous basis. The modelling work is based on primary data available at the time of the data freeze for Simpevarp 1.2, April 1, 2004. The local scale model area (24 km 2 ) for the Simpevarp 1.2 modelling encompasses both the Simpevarp and Laxemar subareas. The local model area is located in the centre of a regional scale model area (273 km 2 ). Surface ecosystem models in terms of pools and fluxes of carbon have been developed for the terrestrial (e.g. plants and animals) and limnic (e.g. algae and fish) systems using the Lake Frisksjoen drainage area. Furthermore, a first marine ecosystem model has been developed for the Basin Borholmsfjaerden. Three principal lithological domains have been defined in the subarea, an A domain that is dominated by the Aevroe granite, a domain B that is dominated by the fine-grained dioritoid, a C domain that is characterised by a mixture of of Aevroe granite and quartz monzodiorite. A fourth domain is made up a few scattered domains of diorite to gabbro. In total, 22 deformation zones with high confidence of occurrence have been interpreted in the local scale model area. The understanding of the interpreted deformation zones of the Simpevarp subarea is considered adequate to make a preliminary assessment of available storage volumes for a deep repository. High rock stresses do not appear to be a major concern for the Simpevarp subarea. The magnitude of the maximum principal stress at 500 m in the Simpevarp subarea is estimated at 10-22 MPa. The analysis of the thermal conductivity has developed considerably since Simpevarp 1.1. In terms of interpreted mean values for the identified lithological domains, the

  10. Single molecule transcription profiling with AFM

    International Nuclear Information System (INIS)

    Reed, Jason; Mishra, Bud; Pittenger, Bede; Magonov, Sergei; Troke, Joshua; Teitell, Michael A; Gimzewski, James K

    2007-01-01

    Established techniques for global gene expression profiling, such as microarrays, face fundamental sensitivity constraints. Due to greatly increasing interest in examining minute samples from micro-dissected tissues, including single cells, unorthodox approaches, including molecular nanotechnologies, are being explored in this application. Here, we examine the use of single molecule, ordered restriction mapping, combined with AFM, to measure gene transcription levels from very low abundance samples. We frame the problem mathematically, using coding theory, and present an analysis of the critical error sources that may serve as a guide to designing future studies. We follow with experiments detailing the construction of high density, single molecule, ordered restriction maps from plasmids and from cDNA molecules, using two different enzymes, a result not previously reported. We discuss these results in the context of our calculations

  11. AFM Morphology Study of Si1-Y GeY:H Films Deposited by LF PE CVD from Silane-Germane with Different

    Energy Technology Data Exchange (ETDEWEB)

    Sanchez, L; Kosarev, A

    2005-03-28

    The morphology of Si{sub 1-Y} Ge{sub Y}:H films in the range of Y=0.23 to 0.9 has been studied by AFM. The films were deposited by Low Frequency (LF) PE CVD at substrate temperature T{sub s}=300 C and discharge frequency f=110 kHz from silane+germane mixture with and without, Ar and H{sub 2} dilution. The films were deposited on silicon and glass substrates. AFM images were taken and analyzed for 2 x 2 mm{sup 2} area. All the images demonstrated ''grain'' like structure, which was characterized by the height distribution function F(H) average roughness , standard height deviation Rq, lateral correlation length L{sub c} area distribution function F(s), mean grain area , diameter distribution function F(d), and mean grain diameter . The roughness of the films monotonically increases with Y for all dilutions, but more significantly in the films deposited without dilution. L{sub c} continuously grows with Y in the films deposited without dilution, while more complex behavior L{sub c}(Y) is observed in the films deposited with H- or Ar dilution. The sharpness of F(H) characterized by curtosis {gamma} depends on dilution and the sharpest F(H) are for the films deposited with Ar ({gamma}=5.30,Y=0.23) and without dilution ({gamma}=4.3, Y=0.45). Isothermal annealing caused increase of , L{sub c} in the films deposited with H- and Ar dilutions, while in the films prepared without dilution the behavior was more complex, depending on the substrates. Significant narrowing of the height distribution was observed in the films deposited with H dilution or without dilution.

  12. Neural network approximation of tip-abrasion effects in AFM imaging

    International Nuclear Information System (INIS)

    Bakucz, Peter; Dziomba, Thorsten; Koenders, Ludger; Krüger-Sehm, Rolf; Yacoot, Andrew

    2008-01-01

    The abrasion (wear) of tips used in scanning force microscopy (SFM) directly influences SFM image quality and is therefore of great relevance to quantitative SFM measurements. The increasing implementation of automated SFM measurement schemes has become a strong driving force for increasing efforts towards the prediction of tip wear, as it needs to be ensured that the probe is exchanged before a level of tip wear is reached that adversely affects the measurement quality. In this paper, we describe the identification of tip abrasion in a system of SFM measurements. We attempt to model the tip-abrasion process as a concatenation of a mapping from the measured AFM data to a regression vector and a nonlinear mapping from the regressor space to the output space. The mapping is formed as a basis function expansion. Feedforward neural networks are used to approximate this mapping. The one-hidden layer network gave a good quality of fit for the training and test sets for the tip-abrasion system. We illustrate our method with AFM measurements of both fine periodic structures and randomly oriented sharp features and compare our neural network results with those obtained using other methods

  13. Neural network approximation of tip-abrasion effects in AFM imaging

    Science.gov (United States)

    Bakucz, Peter; Yacoot, Andrew; Dziomba, Thorsten; Koenders, Ludger; Krüger-Sehm, Rolf

    2008-06-01

    The abrasion (wear) of tips used in scanning force microscopy (SFM) directly influences SFM image quality and is therefore of great relevance to quantitative SFM measurements. The increasing implementation of automated SFM measurement schemes has become a strong driving force for increasing efforts towards the prediction of tip wear, as it needs to be ensured that the probe is exchanged before a level of tip wear is reached that adversely affects the measurement quality. In this paper, we describe the identification of tip abrasion in a system of SFM measurements. We attempt to model the tip-abrasion process as a concatenation of a mapping from the measured AFM data to a regression vector and a nonlinear mapping from the regressor space to the output space. The mapping is formed as a basis function expansion. Feedforward neural networks are used to approximate this mapping. The one-hidden layer network gave a good quality of fit for the training and test sets for the tip-abrasion system. We illustrate our method with AFM measurements of both fine periodic structures and randomly oriented sharp features and compare our neural network results with those obtained using other methods.

  14. Internal rotation for predicting conformational population of 1,2-difluorethane and 1,2-dichloroethane

    Energy Technology Data Exchange (ETDEWEB)

    Venâncio, Mateus F. [Laboratório de Química Computacional e Modelagem Molecular, Departamento de Química, ICEx, Universidade Federal de Minas Gerais, Campus Universitário, 31.270-901 Belo Horizonte, MG (Brazil); Dos Santos, Hélio F. [Núcleo de Estudos em Química Computacional (NEQC), Departamento de Química, ICE, Universidade Federal de Juiz de Fora (UFJF), Campus Universitário, Martelos, Juiz de Fora, MG 36036-330 (Brazil); De Almeida, Wagner B., E-mail: wbdealmeida@gmail.com [Laboratório de Química Computacional (LQC), Departamento de Química Inorgânica, Instituto de Química, Universidade Federal Fluminense, Campus do Valonguinho, Centro, Niterói, RJ CEP: 24020-141 (Brazil)

    2016-06-15

    Highlights: • Contribution of internal rotation to Gibbs free energy estimated using the quantum pendulum model. • Theoretical prediction of conformational population of 1,2-difluorethane and 1,2-dichloroethane. • The predicted populations are in excellent agreement with experimental gas phase data available. • QPM model account for low vibrational frequency modes effect on thermodynamic calculation. • Caution is needed when the RR–HO approach has to be used in conformational analysis studies. - Abstract: The contribution of internal rotation to the thermal correction of Gibbs free energy (ΔG) is estimated using the quantum pendulum model (QPM) to solve the characteristic Schrödinger equation. The procedure is applied to theoretical prediction of conformational population of 1,2-difluorethane (1,2-DFE) and 1,2-dichloroethane (1,2-DCE) molecules. The predicted population for the anti form was 37% and 75%, for 1,2-DFE and 1,2-DCE respectively, in excellent agreement with experimental gas phase data available, 37 ± 5% and 78 ± 5%. These results provide great support to the use of the QPM model to account for the low vibrational frequency modes effect on the calculation of thermodynamic properties.

  15. Climate applications for NOAA 1/4° Daily Optimum Interpolation Sea Surface Temperature

    Science.gov (United States)

    Boyer, T.; Banzon, P. V. F.; Liu, G.; Saha, K.; Wilson, C.; Stachniewicz, J. S.

    2015-12-01

    Few sea surface temperature (SST) datasets from satellites have the long temporal span needed for climate studies. The NOAA Daily Optimum Interpolation Sea Surface Temperature (DOISST) on a 1/4° grid, produced at National Centers for Environmental Information, is based primarily on SSTs from the Advanced Very High Resolution Radiometer (AVHRR), available from 1981 to the present. AVHRR data can contain biases, particularly when aerosols are present. Over the three decade span, the largest departure of AVHRR SSTs from buoy temperatures occurred during the Mt Pinatubo and El Chichon eruptions. Therefore, in DOISST, AVHRR SSTs are bias-adjusted to match in situ SSTs prior to interpolation. This produces a consistent time series of complete SST fields that is suitable for modelling and investigating local climate phenomena like El Nino or the Pacific warm blob in a long term context. Because many biological processes and animal distributions are temperature dependent, there are also many ecological uses of DOISST (e.g., coral bleaching thermal stress, fish and marine mammal distributions), thereby providing insights into resource management in a changing ocean. The advantages and limitations of using DOISST for different applications will be discussed.

  16. AFM picking-up manipulation of the metaphase chromosome fragment by using the tweezers-type probe

    International Nuclear Information System (INIS)

    Yamanaka, Keiichiro; Saito, Masato; Shichiri, Motoharu; Sugiyama, Sigeru; Takamura, Yuzuru; Hashiguchi, Gen; Tamiya, Eiichi

    2008-01-01

    We have studied the development of a new procedure based on atomic force microscopy (AFM) for the analysis of metaphase chromosome. The aim of this study was to obtain detailed information about the specific locations of genes on the metaphase chromosome. In this research, we performed the manipulation of the metaphase chromosome by using novel AFM probes to obtain chromosome fragments of a smaller size than the ones obtained using the conventional methods, such as glass microneedles. We could pick up the fragment of the metaphase chromosome dissected by the knife-edged probe by using our tweezers-type probe

  17. Geomagnetic Kn, Ks, Km Indices

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — A full description of the indices Kn, Ks, Km is given in a monography,"Indices Kn, Ks et Km, 1964-1967", edited in 1968 by the Centre National de la Recherche...

  18. AFM surface imaging of AISI D2 tool steel machined by the EDM process

    International Nuclear Information System (INIS)

    Guu, Y.H.

    2005-01-01

    The surface morphology, surface roughness and micro-crack of AISI D2 tool steel machined by the electrical discharge machining (EDM) process were analyzed by means of the atomic force microscopy (AFM) technique. Experimental results indicate that the surface texture after EDM is determined by the discharge energy during processing. An excellent machined finish can be obtained by setting the machine parameters at a low pulse energy. The surface roughness and the depth of the micro-cracks were proportional to the power input. Furthermore, the AFM application yielded information about the depth of the micro-cracks is particularly important in the post treatment of AISI D2 tool steel machined by EDM

  19. AFM surface imaging of AISI D2 tool steel machined by the EDM process

    Science.gov (United States)

    Guu, Y. H.

    2005-04-01

    The surface morphology, surface roughness and micro-crack of AISI D2 tool steel machined by the electrical discharge machining (EDM) process were analyzed by means of the atomic force microscopy (AFM) technique. Experimental results indicate that the surface texture after EDM is determined by the discharge energy during processing. An excellent machined finish can be obtained by setting the machine parameters at a low pulse energy. The surface roughness and the depth of the micro-cracks were proportional to the power input. Furthermore, the AFM application yielded information about the depth of the micro-cracks is particularly important in the post treatment of AISI D2 tool steel machined by EDM.

  20. AFM imaging and analysis of local mechanical properties for detection of surface pattern of functional groups

    Energy Technology Data Exchange (ETDEWEB)

    Knotek, Petr, E-mail: petr.knotek@upce.cz [University of Pardubice, Faculty of Chemical Technology, Joint Laboratory of Solid State Chemistry of IMC ASCR and University of Pardubice, Studentska 573, 532 10 Pardubice (Czech Republic); Chanova, Eliska; Rypacek, Frantisek [Institute of Macromolecular Chemistry, Academy of Sciences of the Czech Republic, Heyrovskeho sq. 2, 162 06 Prague (Czech Republic)

    2013-05-01

    In this work we evaluate the applicability of different atomic force microscopy (AFM) modes, such as Phase Shift Imaging, Atomic Force Acoustic Microscopy (AFAM) and Force Spectroscopy, for mapping of the distribution pattern of low-molecular-weight biomimetic groups on polymer biomaterial surfaces. Patterns with either random or clustered spatial distribution of bioactive peptide group derived from fibronectin were prepared by surface deposition of functional block copolymer nano-colloids and grafted with RGDS peptide containing the sequence of amino acids arginine–glycine–aspartic acid–serine (conventionally labeled as RGDS) and carrying biotin as a tag. The biotin-tagged peptides were labeled with 40 nm streptavidin-modified Au nanospheres. The peptide molecules were localized through the detection of bound Au nanospheres by AFM, and thus, the surface distribution of peptides was revealed. AFM techniques capable of monitoring local mechanical properties of the surface were proved to be the most efficient for identification of Au nano-markers. The efficiency was successfully demonstrated on two different patterns, i.e. random and clustered distribution of RGDS peptides on structured surface of the polymer biomaterial. Highlights: ► Bioactive peptides for cell adhesion on PLA-b-PEO biomimetic surface were visualized. ► The biotin-tagged RGDS peptides were labeled with streptavidin-Au nanospheres. ► The RGDS pattern was detected using different atomic force microscopy (AFM) modes. ► Phase Shift Image was proved to be suitable method for studying peptide distribution.

  1. BOREAS AFM-6 Boundary Layer Height Data

    Science.gov (United States)

    Wilczak, James; Hall, Forrest G. (Editor); Newcomer, Jeffrey A. (Editor); Smith, David E. (Technical Monitor)

    2000-01-01

    The Boreal Ecosystem-Atmosphere Study (BOREAS) Airborne Fluxes and Meteorology (AFM)-6 team from National Oceanic and Atmospheric Adminsitration/Environment Technology Laboratory (NOAA/ETL) operated a 915-MHz wind/Radio Acoustic Sounding System (RASS) profiler system in the Southern Study Area (SSA) near the Old Jack Pine (OJP) site. This data set provides boundary layer height information over the site. The data were collected from 21 May 1994 to 20 Sep 1994 and are stored in tabular ASCII files. The boundary layer height data are available from the Earth Observing System Data and Information System (EOSDIS) Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC). The data files are available on a CD-ROM (see document number 20010000884).

  2. Optimization of functionalization conditions for protein analysis by AFM

    Energy Technology Data Exchange (ETDEWEB)

    Arroyo-Hernández, María, E-mail: maria.arroyo@ctb.upm.es [Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón, Madrid (Spain); Departamento de Ciencia de Materiales, ETSI Caminos, Canales y Puertos, Universidad Politécnica de Madrid, 28040 Madrid (Spain); Daza, Rafael; Pérez-Rigueiro, Jose; Elices, Manuel; Nieto-Márquez, Jorge; Guinea, Gustavo V. [Centro de Tecnología Biomédica, Universidad Politécnica de Madrid, 28223 Pozuelo de Alarcón, Madrid (Spain); Departamento de Ciencia de Materiales, ETSI Caminos, Canales y Puertos, Universidad Politécnica de Madrid, 28040 Madrid (Spain)

    2014-10-30

    Highlights: • Highest fluorescence is obtained for central conditions. • Largest primary amine contribution is obtained for central conditions. • RMS roughness is smaller than 1 nm for all functional films. • Selected deposition conditions lead to proper RMS and functionality values. • LDH proteins adsorbed on AVS-films were observed by AFM. - Abstract: Activated vapor silanization (AVS) is used to functionalize silicon surfaces through deposition of amine-containing thin films. AVS combines vapor silanization and chemical vapor deposition techniques and allows the properties of the functionalized layers (thickness, amine concentration and topography) to be controlled by tuning the deposition conditions. An accurate characterization is performed to correlate the deposition conditions and functional-film properties. In particular, it is shown that smooth surfaces with a sufficient surface density of amine groups may be obtained with this technique. These surfaces are suitable for the study of proteins with atomic force microscopy.

  3. A low-cost AFM setup with an interferometer for undergraduates and secondary-school students

    International Nuclear Information System (INIS)

    Bergmann, Antje; Feigl, Daniela; Kuhn, David; Schaupp, Manuel; Quast, Günter; Busch, Kurt; Eichner, Ludwig; Schumacher, Jens

    2013-01-01

    Atomic force microscopy (AFM) is an important tool in nanotechnology. This method makes it possible to observe nanoscopic surfaces beyond the resolution of light microscopy. In order to provide undergraduate and secondary-school students with insights into this world, we have developed a very robust low-cost AFM setup with a Fabry–Perot interferometer as a detecting device. This setup is designed to be operated almost completely manually and its simplicity gives access to a profound understanding of the working principle. Our AFM is operated in a constant height mode, i.e. the topography of the sample surface is represented directly by the deflection of the cantilever. Thus, the measuring procedure can be understood even by secondary-school students; furthermore, it is the method with the lowest cost, totalling not more than 10–15 k Euros. Nevertheless, we are able to examine a large variety of sample topographies such as CD and DVD surfaces, IC structures, blood cells, butterfly wings or moth eyes. Furthermore, force–distance curves can be recorded and the tensile moduli of some materials can be evaluated. We present our setup in detail and describe its working principles. In addition, we show various experiments which have already been performed by students. (paper)

  4. MODIS/Terra Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Day V006

    Data.gov (United States)

    National Aeronautics and Space Administration — MODIS/Terra Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Day (MOD21A1D.006). A new suite of MODIS Land Surface Temperature (LST) and...

  5. MODIS/Aqua Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Day V006

    Data.gov (United States)

    National Aeronautics and Space Administration — MODIS/Aqua Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Day (MYD21A1D.006). A new suite of MODIS Land Surface Temperature (LST) and...

  6. MODIS/Terra Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Night V006

    Data.gov (United States)

    National Aeronautics and Space Administration — MODIS/Terra Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Night (MOD21A1N.006). A new suite of MODIS Land Surface Temperature (LST) and...

  7. MODIS/Aqua Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Night V006

    Data.gov (United States)

    National Aeronautics and Space Administration — MODIS/Aqua Land Surface Temperature/3-Band Emissivity Daily L3 Global 1km SIN Grid Night (MYD21A1N.006). A new suite of MODIS Land Surface Temperature (LST) and...

  8. Fabrication of micro-dot arrays and micro-walls of acrylic acid/melamine resin on aluminum by AFM probe processing and electrophoretic coating

    International Nuclear Information System (INIS)

    Kurokawa, S.; Kikuchi, T.; Sakairi, M.; Takahashi, H.

    2008-01-01

    Micro-dot arrays and micro-walls of acrylic acid/melamine resin were fabricated on aluminum by anodizing, atomic force microscope (AFM) probe processing, and electrophoretic deposition. Barrier type anodic oxide films of 15 nm thickness were formed on aluminum and then the specimen was scratched with an AFM probe in a solution containing acrylic acid/melamine resin nano-particles to remove the anodic oxide film locally. After scratching, the specimen was anodically polarized to deposit acrylic acid/melamine resin electrophoretically at the film-removed area. The resin deposited on the specimen was finally cured by heating. It was found that scratching with the AFM probe on open circuit leads to the contamination of the probe with resin, due to positive shifts in the potential during scratching. Scratching of the specimen under potentiostatic conditions at -1.0 V, however, resulted in successful resin deposition at the film-removed area without probe contamination. The rate of resin deposition increased as the specimen potential becomes more positive during electrophoretic deposition. Arrays of resin dots with a few to several tens μm diameter and 100-1000 nm height, and resin walls with 100-1000 nm height and 1 μm width were obtained on specimens by successive anodizing, probe processing, and electrophoretic deposition

  9. Fabrication of micro-dot arrays and micro-walls of acrylic acid/melamine resin on aluminum by AFM probe processing and electrophoretic coating

    Energy Technology Data Exchange (ETDEWEB)

    Kurokawa, S.; Kikuchi, T.; Sakairi, M. [Graduate School of Engineering, Hokkaido University, N-13, W-8, Kita-Ku, Sapporo 060-8628 (Japan); Takahashi, H. [Graduate School of Engineering, Hokkaido University, N-13, W-8, Kita-Ku, Sapporo 060-8628 (Japan)], E-mail: takahasi@elechem1-mc.eng.hokudai.ac.jp

    2008-11-30

    Micro-dot arrays and micro-walls of acrylic acid/melamine resin were fabricated on aluminum by anodizing, atomic force microscope (AFM) probe processing, and electrophoretic deposition. Barrier type anodic oxide films of 15 nm thickness were formed on aluminum and then the specimen was scratched with an AFM probe in a solution containing acrylic acid/melamine resin nano-particles to remove the anodic oxide film locally. After scratching, the specimen was anodically polarized to deposit acrylic acid/melamine resin electrophoretically at the film-removed area. The resin deposited on the specimen was finally cured by heating. It was found that scratching with the AFM probe on open circuit leads to the contamination of the probe with resin, due to positive shifts in the potential during scratching. Scratching of the specimen under potentiostatic conditions at -1.0 V, however, resulted in successful resin deposition at the film-removed area without probe contamination. The rate of resin deposition increased as the specimen potential becomes more positive during electrophoretic deposition. Arrays of resin dots with a few to several tens {mu}m diameter and 100-1000 nm height, and resin walls with 100-1000 nm height and 1 {mu}m width were obtained on specimens by successive anodizing, probe processing, and electrophoretic deposition.

  10. Surface study of irradiated sapphires from Phrae Province, Thailand using AFM

    Science.gov (United States)

    Monarumit, N.; Jivanantaka, P.; Mogmued, J.; Lhuaamporn, T.; Satitkune, S.

    2017-09-01

    The irradiation is one of the gemstone enhancements for improving the gem quality. Typically, there are many varieties of irradiated gemstones in the gem market such as diamond, topaz, and sapphire. However, it is hard to identify the gemstones before and after irradiation. The aim of this study is to analyze the surface morphology for classifying the pristine and irradiated sapphires using atomic force microscope (AFM). In this study, the sapphire samples were collected from Phrae Province, Thailand. The samples were irradiated by high energy electron beam for a dose of ionizing radiation at 40,000 kGy. As the results, the surface morphology of pristine sapphires shows regular atomic arrangement, whereas, the surface morphology of irradiated sapphires shows the nano-channel observed by the 2D and 3D AFM images. The atomic step height and root mean square roughness have changed after irradiation due to the micro-structural defect on the sapphire surface. Therefore, this study is a frontier application for sapphire identification before and after irradiation.

  11. Automatic determination of the size of elliptical nanoparticles from AFM images

    International Nuclear Information System (INIS)

    Sedlář, Jiří; Zitová, Barbara; Kopeček, Jaromír; Flusser, Jan; Todorciuc, Tatiana; Kratochvílová, Irena

    2013-01-01

    The objective of this work was to develop an accurate method for automatic determination of the size of elliptical nanoparticles from atomic force microscopy (AFM) images that would yield results consistent with results of manual measurements by experts. The proposed method was applied on phenylpyridyldiketopyrrolopyrrole (PPDP), a granular organic material with a wide scale of application and highly sensitive particle-size properties. A PPDP layer consists of similarly sized elliptical particles (c. 100 nm × 50 nm) and its properties can be estimated from the average length and width of the particles. The developed method is based on segmentation of salient particles by the watershed transform and approximation of their shapes by ellipses computed by image moments; it estimates the lengths and widths of the particles by the major and minor axes, respectively, of the corresponding ellipses. Its results proved to be consistent with results of manual measurements by a trained expert. The comparison showed that the developed method could be used in practice for precise automatic measurement of PPDP particles in AFM images

  12. Occurrence of aflatoxin M(1) in some samples of UHT, raw & pasteurized milk from Indian states of Karnataka and Tamilnadu.

    Science.gov (United States)

    Siddappa, Vinutha; Nanjegowda, Divyashree Kallenahalli; Viswanath, Prema

    2012-11-01

    Aflatoxin M(1) (AFM(1)) is a toxic metabolite found in the milk of lactating animals which have consumed feedstuffs contaminated with aflatoxin B(1). Ultra high temperature treated (UHT) milk is a product which is becoming popular in developing countries like India as there is a lack of proper cold storage or refrigeration facilities. In this study, 45 samples of UHT milk of popular brands prevalent in the market were analyzed for the presence of AFM(1) by reversed phase HPLC using fluorescent detector after cleanup of sample with immunoaffinity columns. All samples of plain UHT milk were positive for AFM(1) and 38% of these contained levels more than 0.5 μg/kg, the maximum permitted limit prescribed by the Codex Alimentarius Commission and by the mandatory regulations of the country, the FSSAI Regulations, 2011. In 62.5% of flavored UHT milk, AFM(1) was below detectable levels (0.02 μgL(-1)). However, 12.5% of these samples also contained levels exceeding the maximum permitted limits. AFM(1) was present in 61.6% of the 52 raw milk samples analyzed from the two states of Karnataka and Tamilnadu with a range of 0.1-3.8 μgL(-1). 17.3% of these samples also exceeded the regulatory limits of the country. Copyright © 2012 Elsevier Ltd. All rights reserved.

  13. In Situ STM and AFM of the Copper Protein Pseudomonas Aeruginosa Azurin

    DEFF Research Database (Denmark)

    Friis, Esben P.; Andersen, Jens Enevold Thaulov; Madsen, L.L.

    1997-01-01

    to gold and facile electron tunnel routes between this group and the copper atom. Azurin adsorbed on Au(111) can be imaged to molecular resolution by in situ STM and shows regular arrays of individual structures corresponding well to the known molecular size of azurin. The current falls off approximately...... exponentially with increasing distance with a decay constant of 0.4–0.5 Å−1. In comparison in situ AFM shows structures laterally convoluted with the tip while the vertical extension is in the same range as the structural size of azurin. The results are of interest in relation to electron tunnel mechanisms...

  14. A comprehensive modeling and vibration analysis of AFM microcantilevers subjected to nonlinear tip-sample interaction forces

    International Nuclear Information System (INIS)

    Eslami, Sohrab; Jalili, Nader

    2012-01-01

    Precise and accurate representation of an Atomic Force Microscopy (AFM) system is essential in studying the effects of boundary interaction forces present between the probe's tip and the sample. In this paper, a comprehensive analytical model for the AFM system utilizing a distributed-parameters based approach is proposed. More specifically, we consider two important attributes of these systems; namely the rotary inertia and shear deformation when compared with the Euler–Bernoulli beam theory. Moreover, a comprehensive nonlinear interaction force is assumed between probe's and sample in order to reveal the response of the system more realistically. This nanoscale interaction force is based on a general form consisting of both attractive and repulsive components as well as a function of the tip-sample distance and the microcantilever's base and sample oscillations. Mechanical properties of the sample could interact with the nanomechanical coupling field between the probe' tip and sample and be implemented in studying the composition information of the sample and the ultra-small features inside it. Therefore, by modulating the dynamics of the AFM system such as the driving amplitude of the microcantilever the procedure for the subsurface imaging is described. The presented approach here could be implemented for designing the AFM probes by examining the tip-sample interaction forces dominant by the van der Waals forces. Several numerical case studies are presented and the force–distance diagram reveals that the proposed nonlinear nanomechanical force along with the distributed-parameters model for the microcantilever is able to fulfill the mechanics of the Lennard–Jones potential. -- Highlights: ► We present a comprehensive distributed-parameters model for AFM microcantilever. ► Assuming a nonlinear and implicit interaction force between tip and sample. ► Timoshenko beam is compared with the Euler–Bernoulli having the same force model. ► Frequency

  15. Observation of Shapiro-steps in AFM-plought micron-size YBCO planar construction

    CSIR Research Space (South Africa)

    Elkaseh, AAO

    2009-01-01

    Full Text Available Using an Atomic Force Microscope (AFM), micron size planar constriction type junctions was successfully ploughed on YBa2Cu3O7-x thin films. The 100 nanometer (nm) thin films are deposited on MgO substrates by an Inverted Cylindrical Magnetron (ICM...

  16. AFM imaging and fractal analysis of surface roughness of AlN epilayers on sapphire substrates

    Energy Technology Data Exchange (ETDEWEB)

    Dallaeva, Dinara, E-mail: dinara.dallaeva@yandex.ru [Brno University of Technology, Faculty of Electrical Engineering and Communication, Physics Department, Technická 8, 616 00 Brno (Czech Republic); Ţălu, Ştefan [Technical University of Cluj-Napoca, Faculty of Mechanical Engineering, Department of AET, Discipline of Descriptive Geometry and Engineering Graphics, 103-105 B-dul Muncii Street, Cluj-Napoca 400641, Cluj (Romania); Stach, Sebastian [University of Silesia, Faculty of Computer Science and Materials Science, Institute of Informatics, Department of Biomedical Computer Systems, ul. Będzińska 39, 41-205 Sosnowiec (Poland); Škarvada, Pavel; Tománek, Pavel; Grmela, Lubomír [Brno University of Technology, Faculty of Electrical Engineering and Communication, Physics Department, Technická 8, 616 00 Brno (Czech Republic)

    2014-09-01

    Graphical abstract: - Highlights: • We determined the complexity of 3D surface roughness of aluminum nitride layers. • We used atomic force microscopy and analyzed their fractal geometry. • We determined the fractal dimension of surface roughness of aluminum nitride layers. • We determined the dependence of layer morphology on substrate temperature. - Abstract: The paper deals with AFM imaging and characterization of 3D surface morphology of aluminum nitride (AlN) epilayers on sapphire substrates prepared by magnetron sputtering. Due to the effect of temperature changes on epilayer's surface during the fabrication, a surface morphology is studied by combination of atomic force microscopy (AFM) and fractal analysis methods. Both methods are useful tools that may assist manufacturers in developing and fabricating AlN thin films with optimal surface characteristics. Furthermore, they provide different yet complementary information to that offered by traditional surface statistical parameters. This combination is used for the first time for measurement on AlN epilayers on sapphire substrates, and provides the overall 3D morphology of the sample surfaces (by AFM imaging), and reveals fractal characteristics in the surface morphology (fractal analysis)

  17. Quantitative measurements of intercellular adhesion between a macrophage and cancer cells using a cup-attached AFM chip.

    Science.gov (United States)

    Kim, Hyonchol; Yamagishi, Ayana; Imaizumi, Miku; Onomura, Yui; Nagasaki, Akira; Miyagi, Yohei; Okada, Tomoko; Nakamura, Chikashi

    2017-07-01

    Intercellular adhesion between a macrophage and cancer cells was quantitatively measured using atomic force microscopy (AFM). Cup-shaped metal hemispheres were fabricated using polystyrene particles as a template, and a cup was attached to the apex of the AFM cantilever. The cup-attached AFM chip (cup-chip) approached a murine macrophage cell (J774.2), the cell was captured on the inner concave of the cup, and picked up by withdrawing the cup-chip from the substrate. The cell-attached chip was advanced towards a murine breast cancer cell (FP10SC2), and intercellular adhesion between the two cells was quantitatively measured. To compare cell adhesion strength, the work required to separate two adhered cells (separation work) was used as a parameter. Separation work was almost 2-fold larger between a J774.2 cell and FP10SC2 cell than between J774.2 cell and three additional different cancer cells (4T1E, MAT-LyLu, and U-2OS), two FP10SC2 cells, or two J774.2 cells. FP10SC2 was established from 4T1E as a highly metastatic cell line, indicates separation work increased as the malignancy of cancer cells became higher. One possible explanation of the strong adhesion of macrophages to cancer cells observed in this study is that the measurement condition mimicked the microenvironment of tumor-associated macrophages (TAMs) in vivo, and J774.2 cells strongly expressed CD204, which is a marker of TAMs. The results of the present study, which were obtained by measuring cell adhesion strength quantitatively, indicate that the fabricated cup-chip is a useful tool for measuring intercellular adhesion easily and quantitatively. Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Submillimeter Array {sup 12}CO (2-1) Imaging of the NGC 6946 Giant Molecular Clouds

    Energy Technology Data Exchange (ETDEWEB)

    Wu, Ya-Lin [Steward Observatory, University of Arizona, Tucson, AZ 85721 (United States); Sakamoto, Kazushi; Pan, Hsi-An, E-mail: yalinwu@email.arizona.edu [Academia Sinica, Institute of Astronomy and Astrophysics, Taiwan (China)

    2017-04-10

    We present a {sup 12}CO (2–1) mosaic map of the spiral galaxy NGC 6946 by combining data from the Submillimeter Array and the IRAM 30 m telescope. We identify 390 giant molecular clouds (GMCs) from the nucleus to 4.5 kpc in the disk. GMCs in the inner 1 kpc are generally more luminous and turbulent, some of which have luminosities >10{sup 6} K km s{sup −1} pc{sup 2} and velocity dispersions >10 km s{sup −1}. Large-scale bar-driven dynamics likely regulate GMC properties in the nuclear region. Similar to the Milky Way and other disk galaxies, GMC mass function of NGC 6946 has a shallower slope (index > −2) in the inner region, and a steeper slope (index < −2) in the outer region. This difference in mass spectra may be indicative of different cloud formation pathways: gravitational instabilities might play a major role in the nuclear region, while cloud coalescence might be dominant in the outer disk. Finally, the NGC 6946 clouds are similar to those in M33 in terms of statistical properties, but they are generally less luminous and turbulent than the M51 clouds.

  19. Estimation of Global 1km-grid Terrestrial Carbon Exchange Part II: Evaluations and Applications

    Science.gov (United States)

    Murakami, K.; Sasai, T.; Kato, S.; Niwa, Y.; Saito, M.; Takagi, H.; Matsunaga, T.; Hiraki, K.; Maksyutov, S. S.; Yokota, T.

    2015-12-01

    Global terrestrial carbon cycle largely depends on a spatial pattern in land cover type, which is heterogeneously-distributed over regional and global scales. Many studies have been trying to reveal distribution of carbon exchanges between terrestrial ecosystems and atmosphere for understanding global carbon cycle dynamics by using terrestrial biosphere models, satellite data, inventory data, and so on. However, most studies remained within several tens of kilometers grid spatial resolution, and the results have not been enough to understand the detailed pattern of carbon exchanges based on ecological community and to evaluate the carbon stocks by forest ecosystems in each countries. Improving the sophistication of spatial resolution is obviously necessary to enhance the accuracy of carbon exchanges. Moreover, the improvement may contribute to global warming awareness, policy makers and other social activities. We show global terrestrial carbon exchanges (net ecosystem production, net primary production, and gross primary production) with 1km-grid resolution. The methodology for these estimations are shown in the 2015 AGU FM poster "Estimation of Global 1km-grid Terrestrial Carbon Exchange Part I: Developing Inputs and Modelling". In this study, we evaluated the carbon exchanges in various regions with other approaches. We used the satellite-driven biosphere model (BEAMS) as our estimations, GOSAT L4A CO2 flux data, NEP retrieved by NICAM and CarbonTracer2013 flux data, for period from Jun 2001 to Dec 2012. The temporal patterns for this period were indicated similar trends between BEAMS, GOSAT, NICAM, and CT2013 in many sub-continental regions. Then, we estimated the terrestrial carbon exchanges in each countries, and could indicated the temporal patterns of the exchanges in large carbon stock regions.Global terrestrial carbon cycle largely depends on a spatial pattern of land cover type, which is heterogeneously-distributed over regional and global scales. Many

  20. Estimation of Global 1km-grid Terrestrial Carbon Exchange Part I: Developing Inputs and Modelling

    Science.gov (United States)

    Sasai, T.; Murakami, K.; Kato, S.; Matsunaga, T.; Saigusa, N.; Hiraki, K.

    2015-12-01

    Global terrestrial carbon cycle largely depends on a spatial pattern in land cover type, which is heterogeneously-distributed over regional and global scales. However, most studies, which aimed at the estimation of carbon exchanges between ecosystem and atmosphere, remained within several tens of kilometers grid spatial resolution, and the results have not been enough to understand the detailed pattern of carbon exchanges based on ecological community. Improving the sophistication of spatial resolution is obviously necessary to enhance the accuracy of carbon exchanges. Moreover, the improvement may contribute to global warming awareness, policy makers and other social activities. In this study, we show global terrestrial carbon exchanges (net ecosystem production, net primary production, and gross primary production) with 1km-grid resolution. As methodology for computing the exchanges, we 1) developed a global 1km-grid climate and satellite dataset based on the approach in Setoyama and Sasai (2013); 2) used the satellite-driven biosphere model (Biosphere model integrating Eco-physiological And Mechanistic approaches using Satellite data: BEAMS) (Sasai et al., 2005, 2007, 2011); 3) simulated the carbon exchanges by using the new dataset and BEAMS by the use of a supercomputer that includes 1280 CPU and 320 GPGPU cores (GOSAT RCF of NIES). As a result, we could develop a global uniform system for realistically estimating terrestrial carbon exchange, and evaluate net ecosystem production in each community level; leading to obtain highly detailed understanding of terrestrial carbon exchanges.