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Sample records for affymetrix genechip wheat

  1. Large-scale analysis of antisense transcription in wheat using the Affymetrix GeneChip Wheat Genome Array

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    Settles Matthew L

    2009-05-01

    Full Text Available Abstract Background Natural antisense transcripts (NATs are transcripts of the opposite DNA strand to the sense-strand either at the same locus (cis-encoded or a different locus (trans-encoded. They can affect gene expression at multiple stages including transcription, RNA processing and transport, and translation. NATs give rise to sense-antisense transcript pairs and the number of these identified has escalated greatly with the availability of DNA sequencing resources and public databases. Traditionally, NATs were identified by the alignment of full-length cDNAs or expressed sequence tags to genome sequences, but an alternative method for large-scale detection of sense-antisense transcript pairs involves the use of microarrays. In this study we developed a novel protocol to assay sense- and antisense-strand transcription on the 55 K Affymetrix GeneChip Wheat Genome Array, which is a 3' in vitro transcription (3'IVT expression array. We selected five different tissue types for assay to enable maximum discovery, and used the 'Chinese Spring' wheat genotype because most of the wheat GeneChip probe sequences were based on its genomic sequence. This study is the first report of using a 3'IVT expression array to discover the expression of natural sense-antisense transcript pairs, and may be considered as proof-of-concept. Results By using alternative target preparation schemes, both the sense- and antisense-strand derived transcripts were labeled and hybridized to the Wheat GeneChip. Quality assurance verified that successful hybridization did occur in the antisense-strand assay. A stringent threshold for positive hybridization was applied, which resulted in the identification of 110 sense-antisense transcript pairs, as well as 80 potentially antisense-specific transcripts. Strand-specific RT-PCR validated the microarray observations, and showed that antisense transcription is likely to be tissue specific. For the annotated sense

  2. Comparison of target labeling methods for use with Affymetrix GeneChips

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    Vernon Suzanne D

    2007-05-01

    Full Text Available Abstract Background Several different commercial one-cycle labeling kits are available for preparation of the target for use with the Affymetrix GeneChip platform. However, there have been no evaluations of these different kits to determine if comparable results were generated. We report on the cRNA target synthesis, labeling efficiency and hybridization results using the One-Cycle Target Labeling Assay™ (Affymetrix, the BioArray RNA Amplification and Labeling System™ (Enzo Life Sciences, and the Superscript RNA Amplification System (Invitrogen Life Technologies. Results The only notable difference between kits was in the yield of cRNA target synthesized during in vitro transcription, where the BioArray assay had to be repeated several times in order to have sufficient target. However, each kit resulted in comparable signal and detection calls when hybridized to the Affymetrix GeneChip. Conclusion These 3 one-cycle labeling kits produce comparable hybridization results. This provides users with several kit options and flexibility when using the Affymetrix system.

  3. BGX: a Bioconductor package for the Bayesian integrated analysis of Affymetrix GeneChips

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    Hein Anne-Mette K

    2007-11-01

    Full Text Available Abstract Background Affymetrix 3' GeneChip microarrays are widely used to profile the expression of thousands of genes simultaneously. They differ from many other microarray types in that GeneChips are hybridised using a single labelled extract and because they contain multiple 'match' and 'mismatch' sequences for each transcript. Most algorithms extract the signal from GeneChip experiments in a sequence of separate steps, including background correction and normalisation, which inhibits the simultaneous use of all available information. They principally provide a point estimate of gene expression and, in contrast to BGX, do not fully integrate the uncertainty arising from potentially heterogeneous responses of the probes. Results BGX is a new Bioconductor R package that implements an integrated Bayesian approach to the analysis of 3' GeneChip data. The software takes into account additive and multiplicative error, non-specific hybridisation and replicate summarisation in the spirit of the model outlined in 1. It also provides a posterior distribution for the expression of each gene. Moreover, BGX can take into account probe affinity effects from probe sequence information where available. The package employs a novel adaptive Markov chain Monte Carlo (MCMC algorithm that raises considerably the efficiency with which the posterior distributions are sampled from. Finally, BGX incorporates various ways to analyse the results, such as ranking genes by expression level as well as statistically based methods for estimating the amount of up and down regulated genes between two conditions. Conclusion BGX performs well relative to other widely used methods at estimating expression levels and fold changes. It has the advantage that it provides a statistically sound measure of uncertainty for its estimates. BGX includes various analysis functions to visualise and exploit the rich output that is produced by the Bayesian model.

  4. Coverage and characteristics of the Affymetrix GeneChip Human Mapping 100K SNP set.

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    2006-05-01

    Full Text Available Improvements in technology have made it possible to conduct genome-wide association mapping at costs within reach of academic investigators, and experiments are currently being conducted with a variety of high-throughput platforms. To provide an appropriate context for interpreting results of such studies, we summarize here results of an investigation of one of the first of these technologies to be publicly available, the Affymetrix GeneChip Human Mapping 100K set of single nucleotide polymorphisms (SNPs. In a systematic analysis of the pattern and distribution of SNPs in the Mapping 100K set, we find that SNPs in this set are undersampled from coding regions (both nonsynonymous and synonymous and oversampled from regions outside genes, relative to SNPs in the overall HapMap database. In addition, we utilize a novel multilocus linkage disequilibrium (LD coefficient based on information content (analogous to the information content scores commonly used for linkage mapping that is equivalent to the familiar measure r2 in the special case of two loci. Using this approach, we are able to summarize for any subset of markers, such as the Affymetrix Mapping 100K set, the information available for association mapping in that subset, relative to the information available in the full set of markers included in the HapMap, and highlight circumstances in which this multilocus measure of LD provides substantial additional insight about the haplotype structure in a region over pairwise measures of LD.

  5. Discovery and mapping of single feature polymorphisms in wheat using Affymetrix arrays

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    Hu Shengwa

    2009-05-01

    Full Text Available Abstract Background Wheat (Triticum aestivum L. is a staple food crop worldwide. The wheat genome has not yet been sequenced due to its huge genome size (~17,000 Mb and high levels of repetitive sequences; the whole genome sequence may not be expected in the near future. Available linkage maps have low marker density due to limitation in available markers; therefore new technologies that detect genome-wide polymorphisms are still needed to discover a large number of new markers for construction of high-resolution maps. A high-resolution map is a critical tool for gene isolation, molecular breeding and genomic research. Single feature polymorphism (SFP is a new microarray-based type of marker that is detected by hybridization of DNA or cRNA to oligonucleotide probes. This study was conducted to explore the feasibility of using the Affymetrix GeneChip to discover and map SFPs in the large hexaploid wheat genome. Results Six wheat varieties of diverse origins (Ning 7840, Clark, Jagger, Encruzilhada, Chinese Spring, and Opata 85 were analyzed for significant probe by variety interactions and 396 probe sets with SFPs were identified. A subset of 164 unigenes was sequenced and 54% showed polymorphism within probes. Microarray analysis of 71 recombinant inbred lines from the cross Ning 7840/Clark identified 955 SFPs and 877 of them were mapped together with 269 simple sequence repeat markers. The SFPs were randomly distributed within a chromosome but were unevenly distributed among different genomes. The B genome had the most SFPs, and the D genome had the least. Map positions of a selected set of SFPs were validated by mapping single nucleotide polymorphism using SNaPshot and comparing with expressed sequence tags mapping data. Conclusion The Affymetrix array is a cost-effective platform for SFP discovery and SFP mapping in wheat. The new high-density map constructed in this study will be a useful tool for genetic and genomic research in wheat.

  6. Genome-wide loss of heterozygosity and copy number alteration in esophageal squamous cell carcinoma using the Affymetrix GeneChip Mapping 10 K array

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    Goldstein Alisa M

    2006-11-01

    Full Text Available Abstract Background Esophageal squamous cell carcinoma (ESCC is a common malignancy worldwide. Comprehensive genomic characterization of ESCC will further our understanding of the carcinogenesis process in this disease. Results Genome-wide detection of chromosomal changes was performed using the Affymetrix GeneChip 10 K single nucleotide polymorphism (SNP array, including loss of heterozygosity (LOH and copy number alterations (CNA, for 26 pairs of matched germ-line and micro-dissected tumor DNA samples. LOH regions were identified by two methods – using Affymetrix's genotype call software and using Affymetrix's copy number alteration tool (CNAT software – and both approaches yielded similar results. Non-random LOH regions were found on 10 chromosomal arms (in decreasing order of frequency: 17p, 9p, 9q, 13q, 17q, 4q, 4p, 3p, 15q, and 5q, including 20 novel LOH regions (10 kb to 4.26 Mb. Fifteen CNA-loss regions (200 kb to 4.3 Mb and 36 CNA-gain regions (200 kb to 9.3 Mb were also identified. Conclusion These studies demonstrate that the Affymetrix 10 K SNP chip is a valid platform to integrate analyses of LOH and CNA. The comprehensive knowledge gained from this analysis will enable improved strategies to prevent, diagnose, and treat ESCC.

  7. Comparative Transcriptomic Profiling of Vitis vinifera Under High Light Using a Custom-Made Array and the Affymetrix GeneChip

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    Luisa C. Carvalho; Belmiro J. Vilela; Phil M. Mullineaux; Sara Am(a)ncio

    2011-01-01

    Understanding abiotic stress responses is one of the most important issues in plant research nowadays.Abiotic stress,including excess light,can promote the onset of oxidative stress through the accumulation of reactive oxygen species.Oxidative stress also arises when in vitro propagated plants are exposed to high light upon transfer to ex vitro.To determine whether the underlying pathways activated at the transfer of in vitro grapevine to ex vitro conditions reflect the processes occurring upon light stress,we used Vitis vinifera Affymetrix GeneChip (VvGA) and a custom array of genes responsive to light stress (LSCA) detected by real-time reverse transcriptase PCR (qRT-PCR).When gene-expression profiles were compared,‘protein metabolism and modification',‘signaling',and ‘anti-oxidative' genes were more represented in LSCA,while,in VvGA,‘cell wall metabolism' and ‘secondary metabolism' were the categories in which gene expression varied more significantly.The above functional categories confirm previous studies involving other types of abiotic stresses,enhancing the common attributes of abiotic stress defense pathways.The LSCA analysis of our experimental system detected strong response of heat shock genes,particularly the protein rescuing mechanism involving the cooperation of two ATP-dependent chaperone systems,Hsp100 and Hsp70,which showed an unusually late response during the recovery period,of extreme relevance to remove non-functional,potentially harmful polypeptides arising from misfolding,denaturation,or aggregation brought about by stress.The success of LSCA also proves the feasibility of a custommade qRT-PCR approach,particularly for species for which no GeneChip is available and for researchers dealing with a specific and focused problem.

  8. Lr34-mediated leaf rust resistance in wheat: transcript profiling reveals a high energetic demand supported by transient recruitment of multiple metabolic pathways

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    The wheat gene Lr34 confers partial resistance to all races of Puccinia triticina, the causal agent of wheat leaf rust. However, the biological basis for the exceptional durability of Lr34 is unclear. We used the Affymetrix GeneChip Wheat Genome Array to compare transcriptional changes of wheat in a...

  9. Thermodynamic scaling behavior in genechips

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    Van Hummelen Paul

    2009-01-01

    Full Text Available Abstract Background Affymetrix Genechips are characterized by probe pairs, a perfect match (PM and a mismatch (MM probe differing by a single nucleotide. Most of the data preprocessing algorithms neglect MM signals, as it was shown that MMs cannot be used as estimators of the non-specific hybridization as originally proposed by Affymetrix. The aim of this paper is to study in detail on a large number of experiments the behavior of the average PM/MM ratio. This is taken as an indicator of the quality of the hybridization and, when compared between different chip series, of the quality of the chip design. Results About 250 different GeneChip hybridizations performed at the VIB Microarray Facility for Homo sapiens, Drosophila melanogaster, and Arabidopsis thaliana were analyzed. The investigation of such a large set of data from the same source minimizes systematic experimental variations that may arise from differences in protocols or from different laboratories. The PM/MM ratios are derived theoretically from thermodynamic laws and a link is made with the sequence of PM and MM probe, more specifically with their central nucleotide triplets. Conclusion The PM/MM ratios subdivided according to the different central nucleotides triplets follow qualitatively those deduced from the hybridization free energies in solution. It is shown also that the PM and MM histograms are related by a simple scale transformation, in agreement with what is to be expected from hybridization thermodynamics. Different quantitative behavior is observed on the different chip organisms analyzed, suggesting that some organism chips have superior probe design compared to others.

  10. Analysis of genome-wide gene expression in root of wheat hybrid and its parents using Barley1 GeneChip

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    ZHANG Yinhong; NI Zhongfu; YAO Yingyin; ZHAO Jun; SUN Qixin

    2006-01-01

    Previous studies indicated that differential gene expression between hybrids and their parents is responsible for the heterosis. In this paper, we report genome-wide gene expression analysis in roots of a highly heterotic inter-specific hybrid 3338/2463 and its parental inbreds using Barley GeneChip. A total of 1187 genes displayed difference in gene expressions between hybrid 3338/2463 and its parents, and they can be clustered into eight differential expression patterns. Further analysis revealed that among these 1187 genes, 975genes showed high sequence similarity to the GenBank entries, and represented diverse functional categories, such as metabolism, cell growth and maintenance, signal transduction, response to stress, transcription regulation and others. Fourteen genes were selected for RT-PCR analysis and expression patterns of 9 (64.29%) genes were confirmed. Remarkably, 380 differentially expressed genes could be mapped on the Chinese Spring deletion bins, and with the number of genes in seven homoeologous groups being 158, 148, 121, 140,132, 94 and 127 respectively. It is concluded that a combination of systematic identification of differentially expressed genes with comparative mapping would provide further insight into understanding of molecular basis of heterosis.

  11. Combining Affymetrix microarray results

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    Doerge RW

    2005-03-01

    Full Text Available Abstract Background As the use of microarray technology becomes more prevalent it is not unusual to find several laboratories employing the same microarray technology to identify genes related to the same condition in the same species. Although the experimental specifics are similar, typically a different list of statistically significant genes result from each data analysis. Results We propose a statistically-based meta-analytic approach to microarray analysis for the purpose of systematically combining results from the different laboratories. This approach provides a more precise view of genes that are significantly related to the condition of interest while simultaneously allowing for differences between laboratories. Of particular interest is the widely used Affymetrix oligonucleotide array, the results of which are naturally suited to a meta-analysis. A simulation model based on the Affymetrix platform is developed to examine the adaptive nature of the meta-analytic approach and to illustrate the usefulness of such an approach in combining microarray results across laboratories. The approach is then applied to real data involving a mouse model for multiple sclerosis. Conclusion The quantitative estimates from the meta-analysis model tend to be closer to the "true" degree of differential expression than any single lab. Meta-analytic methods can systematically combine Affymetrix results from different laboratories to gain a clearer understanding of genes' relationships to specific conditions of interest.

  12. AffyMiner: mining differentially expressed genes and biological knowledge in GeneChip microarray data

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    Xia Yuannan; Nguyen The V; Lu Guoqing; Fromm Michael

    2006-01-01

    Abstract Background DNA microarrays are a powerful tool for monitoring the expression of tens of thousands of genes simultaneously. With the advance of microarray technology, the challenge issue becomes how to analyze a large amount of microarray data and make biological sense of them. Affymetrix GeneChips are widely used microarrays, where a variety of statistical algorithms have been explored and used for detecting significant genes in the experiment. These methods rely solely on the quanti...

  13. Novel definition files for human GeneChips based on GeneAnnot

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    Ferrari Sergio

    2007-11-01

    Full Text Available Abstract Background Improvements in genome sequence annotation revealed discrepancies in the original probeset/gene assignment in Affymetrix microarray and the existence of differences between annotations and effective alignments of probes and transcription products. In the current generation of Affymetrix human GeneChips, most probesets include probes matching transcripts from more than one gene and probes which do not match any transcribed sequence. Results We developed a novel set of custom Chip Definition Files (CDF and the corresponding Bioconductor libraries for Affymetrix human GeneChips, based on the information contained in the GeneAnnot database. GeneAnnot-based CDFs are composed of unique custom-probesets, including only probes matching a single gene. Conclusion GeneAnnot-based custom CDFs solve the problem of a reliable reconstruction of expression levels and eliminate the existence of more than one probeset per gene, which often leads to discordant expression signals for the same transcript when gene differential expression is the focus of the analysis. GeneAnnot CDFs are freely distributed and fully compliant with Affymetrix standards and all available software for gene expression analysis. The CDF libraries are available from http://www.xlab.unimo.it/GA_CDF, along with supplementary information (CDF libraries, installation guidelines and R code, CDF statistics, and analysis results.

  14. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat

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    Alberts, Rudi; Terpstra, Peter; Hardonk, Menno; Bystrykh, Leonid V.; de Haan, Gerald; Breitling, Rainer; Nap, Jan-Peter; Jansen, Ritsert C.

    2007-01-01

    Background: The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interpretation. This variation can be caused by probes that do not properly match their target gene or that match multiple gene

  15. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat

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    Alberts, R.; Terpstra, P.; Hardonk, M.; Bystrykh, L.V.; Haan, de G.; Breitling, R.; Nap, J.P.H.; Jansen, R.C.

    2007-01-01

    Background - The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interpretation. This variation can be caused by probes that do not properly match their target gene or that match multiple gen

  16. Identifying the impact of G-quadruplexes on Affymetrix 3' arrays using cloud computing.

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    Memon, Farhat N; Owen, Anne M; Sanchez-Graillet, Olivia; Upton, Graham J G; Harrison, Andrew P

    2010-01-15

    A tetramer quadruplex structure is formed by four parallel strands of DNA/ RNA containing runs of guanine. These quadruplexes are able to form because guanine can Hoogsteen hydrogen bond to other guanines, and a tetrad of guanines can form a stable arrangement. Recently we have discovered that probes on Affymetrix GeneChips that contain runs of guanine do not measure gene expression reliably. We associate this finding with the likelihood that quadruplexes are forming on the surface of GeneChips. In order to cope with the rapidly expanding size of GeneChip array datasets in the public domain, we are exploring the use of cloud computing to replicate our experiments on 3' arrays to look at the effect of the location of G-spots (runs of guanines). Cloud computing is a recently introduced high-performance solution that takes advantage of the computational infrastructure of large organisations such as Amazon and Google. We expect that cloud computing will become widely adopted because it enables bioinformaticians to avoid capital expenditure on expensive computing resources and to only pay a cloud computing provider for what is used. Moreover, as well as financial efficiency, cloud computing is an ecologically-friendly technology, it enables efficient data-sharing and we expect it to be faster for development purposes. Here we propose the advantageous use of cloud computing to perform a large data-mining analysis of public domain 3' arrays.

  17. Genotyping and annotation of Affymetrix SNP arrays

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    Lamy, Philippe; Andersen, Claus Lindbjerg; Wikman, Friedrik;

    2006-01-01

    allows us to annotate SNPs that have poor performance, either because of poor experimental conditions or because for one of the alleles the probes do not behave in a dose-response manner. Generally, our method agrees well with a method developed by Affymetrix. When both methods make a call they agree...

  18. Direct integration of intensity-level data from Affymetrix and Illumina microarrays improves statistical power for robust reanalysis

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    Turnbull Arran K

    2012-08-01

    Full Text Available Abstract Background Affymetrix GeneChips and Illumina BeadArrays are the most widely used commercial single channel gene expression microarrays. Public data repositories are an extremely valuable resource, providing array-derived gene expression measurements from many thousands of experiments. Unfortunately many of these studies are underpowered and it is desirable to improve power by combining data from more than one study; we sought to determine whether platform-specific bias precludes direct integration of probe intensity signals for combined reanalysis. Results Using Affymetrix and Illumina data from the microarray quality control project, from our own clinical samples, and from additional publicly available datasets we evaluated several approaches to directly integrate intensity level expression data from the two platforms. After mapping probe sequences to Ensembl genes we demonstrate that, ComBat and cross platform normalisation (XPN, significantly outperform mean-centering and distance-weighted discrimination (DWD in terms of minimising inter-platform variance. In particular we observed that DWD, a popular method used in a number of previous studies, removed systematic bias at the expense of genuine biological variability, potentially reducing legitimate biological differences from integrated datasets. Conclusion Normalised and batch-corrected intensity-level data from Affymetrix and Illumina microarrays can be directly combined to generate biologically meaningful results with improved statistical power for robust, integrated reanalysis.

  19. FGX : a frequentist gene expression index for Affymetrix arrays

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    Purutçuoğlu, Vilda; Wit, Ernst

    2007-01-01

    We consider a new frequentist gene expression index for Affymetrix oligonucleotide DNA arrays, using a similar probe intensity model as suggested previously, called the Bayesian gene expression index (BGX). According to this model, the perfect match and mismatch values are assumed to be correlated a

  20. Hepatic gene expression profiling using GeneChips in zebrafish exposed to 17{alpha}-methyldihydrotestosterone

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    Hoffmann, J.L.; Thomason, R.G.; Lee, D.M.; Brill, J.L.; Price, B.B.; Carr, G.J. [Miami Valley Innovation Center, Procter and Gamble Company, P.O. Box 538707, Cincinnati, OH 45253-8707 (United States); Versteeg, D.J. [Miami Valley Innovation Center, Procter and Gamble Company, P.O. Box 538707, Cincinnati, OH 45253-8707 (United States)], E-mail: versteeg.dj@pg.com

    2008-04-28

    Concentration and time-dependent changes in hepatic gene expression were examined in adult, female zebrafish (Danio rerio) exposed to 0, 0.1, 0.7, 4.9 {mu}g/L of a model androgen, 17{alpha}-methyldihydrotestosterone (MDHT). At 24 and 168 h, fish were sacrificed and liver was extracted for gene expression analysis using custom Affymetrix GeneChip Zebrafish Genome Microarrays. In an effort to link gene expression changes to higher levels of biological organization, blood was collected for measurement of plasma steroid hormones (17{beta}-estradiol (E2), testosterone (T)) and vitellogenin (VTG) using ELISA. Body and ovary weight were also measured. A significant reduction in E2 occurred at 24 h (0.7 and 4.9 {mu}g/L) and 168 h (4.9 {mu}g/L) following MDHT exposure. In contrast, T was significantly increased at 24 h (4.9 {mu}g/L) and 168 h (0.1, 0.7, 4.9 {mu}g/L). 171 and 575 genes were significantly affected in a concentration-dependent manner at either 24 or 168 h by MDHT exposure at p {<=} 0.001 and p {<=} 0.01, respectively. Genes involved in retinoic acid metabolism (e.g. aldehyde dehydrogenase 8, member A1; retinol dehydrogenase 12), steroid biosynthesis and metabolism (e.g. hydroxysteroid (11{beta}) dehydrogenase 2; hydroxy-delta-5-steroid dehydrogenase, 3 beta-), hormone transport (e.g. sex hormone binding globulin), and regulation of cell growth and proliferation (e.g. N-myc downstream regulated gene 1; spermidinespermine N(1)-acetyltransferase) were affected by MDHT exposure. In this study, we identified genes involved in a variety of biological processes that have the potential to be used as markers of exposure to androgenic substances. Genes identified in this study provide information on the potential mode of action of strong androgens in female fish. In addition, when used for screening of EDC's, these genes may also serve as sensitive markers of exposure to androgenic compounds.

  1. The gene expression data of Mycobacterium tuberculosis based on Affymetrix gene chips provide insight into regulatory and hypothetical genes

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    Fu-Liu Casey S

    2007-05-01

    Full Text Available Abstract Background Tuberculosis remains a leading infectious disease with global public health threat. Its control and management have been complicated by multi-drug resistance and latent infection, which prompts scientists to find new and more effective drugs. With the completion of the genome sequence of the etiologic bacterium, Mycobacterium tuberculosis, it is now feasible to search for new drug targets by sieving through a large number of gene products and conduct genome-scale experiments based on microarray technology. However, the full potential of genome-wide microarray analysis in configuring interrelationships among all genes in M. tuberculosis has yet to be realized. To date, it is only possible to assign a function to 52% of proteins predicted in the genome. Results We conducted a functional-genomics study using the high-resolution Affymetrix oligonucleotide GeneChip. Approximately one-half of the genes were found to be always expressed, including more than 100 predicted conserved hypotheticals, in the genome of M. tuberculosis during the log phase of in vitro growth. The gene expression profiles were analyzed and visualized through cluster analysis to epitomize the full details of genomic behavior. Broad patterns derived from genome-wide expression experiments in this study have provided insight into the interrelationships among genes in the basic cellular processes of M. tuberculosis. Conclusion Our results have confirmed several known gene clusters in energy production, information pathways, and lipid metabolism, and also hinted at potential roles of hypothetical and regulatory proteins.

  2. Methods comparison for high-resolution transcriptional analysis of archival material on Affymetrix Plus 2.0 and Exon 1.0 microarrays.

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    Linton, Kim; Hey, Yvonne; Dibben, Sian; Miller, Crispin; Freemont, Anthony; Radford, John; Pepper, Stuart

    2009-07-01

    Microarray gene expression profiling of formalin-fixed paraffin-embedded (FFPE) tissues is a new and evolving technique. This report compares transcript detection rates on Affymetrix U133 Plus 2.0 and Human Exon 1.0 ST GeneChips across several RNA extraction and target labeling protocols, using routinely collected archival FFPE samples. All RNA extraction protocols tested (Ambion-Optimum, Ambion-RecoverAll, and Qiagen-RNeasy FFPE) provided extracts suitable for microarray hybridization. Compared with Affymetrix One-Cycle labeled extracts, NuGEN system protocols utilizing oligo(dT) and random hexamer primers, and cDNA target preparations instead of cRNA, achieved percent present rates up to 55% on Plus 2.0 arrays. Based on two paired-sample analyses, at 90% specificity this equalled an average 30 percentage-point increase (from 50% to 80%) in FFPE transcript sensitivity relative to fresh frozen tissues, which we have assumed to have 100% sensitivity and specificity. The high content of Exon arrays, with multiple probe sets per exon, improved FFPE sensitivity to 92% at 96% specificity, corresponding to an absolute increase of ~600 genes over Plus 2.0 arrays. While larger series are needed to confirm high correspondence between fresh-frozen and FFPE expression patterns, these data suggest that both Plus 2.0 and Exon arrays are suitable platforms for FFPE microarray expression analyses.

  3. Ranking differentially expressed genes from Affymetrix gene expression data: methods with reproducibility, sensitivity, and specificity

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    Shimizu Kentaro

    2009-04-01

    Full Text Available Abstract Background To identify differentially expressed genes (DEGs from microarray data, users of the Affymetrix GeneChip system need to select both a preprocessing algorithm to obtain expression-level measurements and a way of ranking genes to obtain the most plausible candidates. We recently recommended suitable combinations of a preprocessing algorithm and gene ranking method that can be used to identify DEGs with a higher level of sensitivity and specificity. However, in addition to these recommendations, researchers also want to know which combinations enhance reproducibility. Results We compared eight conventional methods for ranking genes: weighted average difference (WAD, average difference (AD, fold change (FC, rank products (RP, moderated t statistic (modT, significance analysis of microarrays (samT, shrinkage t statistic (shrinkT, and intensity-based moderated t statistic (ibmT with six preprocessing algorithms (PLIER, VSN, FARMS, multi-mgMOS (mmgMOS, MBEI, and GCRMA. A total of 36 real experimental datasets was evaluated on the basis of the area under the receiver operating characteristic curve (AUC as a measure for both sensitivity and specificity. We found that the RP method performed well for VSN-, FARMS-, MBEI-, and GCRMA-preprocessed data, and the WAD method performed well for mmgMOS-preprocessed data. Our analysis of the MicroArray Quality Control (MAQC project's datasets showed that the FC-based gene ranking methods (WAD, AD, FC, and RP had a higher level of reproducibility: The percentages of overlapping genes (POGs across different sites for the FC-based methods were higher overall than those for the t-statistic-based methods (modT, samT, shrinkT, and ibmT. In particular, POG values for WAD were the highest overall among the FC-based methods irrespective of the choice of preprocessing algorithm. Conclusion Our results demonstrate that to increase sensitivity, specificity, and reproducibility in microarray analyses, we need

  4. Alternative mapping of probes to genes for Affymetrix chips

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    Friis-Hansen Lennart

    2004-08-01

    Full Text Available Abstract Background Short oligonucleotide arrays have several probes measuring the expression level of each target transcript. Therefore the selection of probes is a key component for the quality of measurements. However, once probes have been selected and synthesized on an array, it is still possible to re-evaluate the results using an updated mapping of probes to genes, taking into account the latest biological knowledge available. Methods We investigated how probes found on recent commercial microarrays for human genes (Affymetrix HG-U133A were matching a recent curated collection of human transcripts: the NCBI RefSeq database. We also built mappings and used them in place of the original probe to genes associations provided by the manufacturer of the arrays. Results In a large number of cases, 36%, the probes matching a reference sequence were consistent with the grouping of probes by the manufacturer of the chips. For the remaining cases there were discrepancies and we show how that can affect the analysis of data. Conclusions While the probes on Affymetrix arrays remain the same for several years, the biological knowledge concerning the genomic sequences evolves rapidly. Using up-to-date knowledge can apparently change the outcome of an analysis.

  5. Computational method for reducing variance with Affymetrix microarrays

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    Brooks Andrew I

    2002-08-01

    Full Text Available Abstract Background Affymetrix microarrays are used by many laboratories to generate gene expression profiles. Generally, only large differences (> 1.7-fold between conditions have been reported. Computational methods to reduce inter-array variability might be of value when attempting to detect smaller differences. We examined whether inter-array variability could be reduced by using data based on the Affymetrix algorithm for pairwise comparisons between arrays (ratio method rather than data based on the algorithm for analysis of individual arrays (signal method. Six HG-U95A arrays that probed mRNA from young (21–31 yr old human muscle were compared with six arrays that probed mRNA from older (62–77 yr old muscle. Results Differences in mean expression levels of young and old subjects were small, rarely > 1.5-fold. The mean within-group coefficient of variation for 4629 mRNAs expressed in muscle was 20% according to the ratio method and 25% according to the signal method. The ratio method yielded more differences according to t-tests (124 vs. 98 differences at P Conclusion The ratio method reduces inter-array variance and thereby enhances statistical power.

  6. DMET-Analyzer: automatic analysis of Affymetrix DMET Data

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    Guzzi Pietro

    2012-10-01

    Full Text Available Abstract Background Clinical Bioinformatics is currently growing and is based on the integration of clinical and omics data aiming at the development of personalized medicine. Thus the introduction of novel technologies able to investigate the relationship among clinical states and biological machineries may help the development of this field. For instance the Affymetrix DMET platform (drug metabolism enzymes and transporters is able to study the relationship among the variation of the genome of patients and drug metabolism, detecting SNPs (Single Nucleotide Polymorphism on genes related to drug metabolism. This may allow for instance to find genetic variants in patients which present different drug responses, in pharmacogenomics and clinical studies. Despite this, there is currently a lack in the development of open-source algorithms and tools for the analysis of DMET data. Existing software tools for DMET data generally allow only the preprocessing of binary data (e.g. the DMET-Console provided by Affymetrix and simple data analysis operations, but do not allow to test the association of the presence of SNPs with the response to drugs. Results We developed DMET-Analyzer a tool for the automatic association analysis among the variation of the patient genomes and the clinical conditions of patients, i.e. the different response to drugs. The proposed system allows: (i to automatize the workflow of analysis of DMET-SNP data avoiding the use of multiple tools; (ii the automatic annotation of DMET-SNP data and the search in existing databases of SNPs (e.g. dbSNP, (iii the association of SNP with pathway through the search in PharmaGKB, a major knowledge base for pharmacogenomic studies. DMET-Analyzer has a simple graphical user interface that allows users (doctors/biologists to upload and analyse DMET files produced by Affymetrix DMET-Console in an interactive way. The effectiveness and easy use of DMET Analyzer is demonstrated through different

  7. Micro-Analyzer: automatic preprocessing of Affymetrix microarray data.

    Science.gov (United States)

    Guzzi, Pietro Hiram; Cannataro, Mario

    2013-08-01

    A current trend in genomics is the investigation of the cell mechanism using different technologies, in order to explain the relationship among genes, molecular processes and diseases. For instance, the combined use of gene-expression arrays and genomic arrays has been demonstrated as an effective instrument in clinical practice. Consequently, in a single experiment different kind of microarrays may be used, resulting in the production of different types of binary data (images and textual raw data). The analysis of microarray data requires an initial preprocessing phase, that makes raw data suitable for use on existing analysis platforms, such as the TIGR M4 (TM4) Suite. An additional challenge to be faced by emerging data analysis platforms is the ability to treat in a combined way those different microarray formats coupled with clinical data. In fact, resulting integrated data may include both numerical and symbolic data (e.g. gene expression and SNPs regarding molecular data), as well as temporal data (e.g. the response to a drug, time to progression and survival rate), regarding clinical data. Raw data preprocessing is a crucial step in analysis but is often performed in a manual and error prone way using different software tools. Thus novel, platform independent, and possibly open source tools enabling the semi-automatic preprocessing and annotation of different microarray data are needed. The paper presents Micro-Analyzer (Microarray Analyzer), a cross-platform tool for the automatic normalization, summarization and annotation of Affymetrix gene expression and SNP binary data. It represents the evolution of the μ-CS tool, extending the preprocessing to SNP arrays that were not allowed in μ-CS. The Micro-Analyzer is provided as a Java standalone tool and enables users to read, preprocess and analyse binary microarray data (gene expression and SNPs) by invoking TM4 platform. It avoids: (i) the manual invocation of external tools (e.g. the Affymetrix Power

  8. Micro-Analyzer: automatic preprocessing of Affymetrix microarray data.

    Science.gov (United States)

    Guzzi, Pietro Hiram; Cannataro, Mario

    2013-08-01

    A current trend in genomics is the investigation of the cell mechanism using different technologies, in order to explain the relationship among genes, molecular processes and diseases. For instance, the combined use of gene-expression arrays and genomic arrays has been demonstrated as an effective instrument in clinical practice. Consequently, in a single experiment different kind of microarrays may be used, resulting in the production of different types of binary data (images and textual raw data). The analysis of microarray data requires an initial preprocessing phase, that makes raw data suitable for use on existing analysis platforms, such as the TIGR M4 (TM4) Suite. An additional challenge to be faced by emerging data analysis platforms is the ability to treat in a combined way those different microarray formats coupled with clinical data. In fact, resulting integrated data may include both numerical and symbolic data (e.g. gene expression and SNPs regarding molecular data), as well as temporal data (e.g. the response to a drug, time to progression and survival rate), regarding clinical data. Raw data preprocessing is a crucial step in analysis but is often performed in a manual and error prone way using different software tools. Thus novel, platform independent, and possibly open source tools enabling the semi-automatic preprocessing and annotation of different microarray data are needed. The paper presents Micro-Analyzer (Microarray Analyzer), a cross-platform tool for the automatic normalization, summarization and annotation of Affymetrix gene expression and SNP binary data. It represents the evolution of the μ-CS tool, extending the preprocessing to SNP arrays that were not allowed in μ-CS. The Micro-Analyzer is provided as a Java standalone tool and enables users to read, preprocess and analyse binary microarray data (gene expression and SNPs) by invoking TM4 platform. It avoids: (i) the manual invocation of external tools (e.g. the Affymetrix Power

  9. Screening and identification of microRNA involved in unstable angina using gene-chip analysis

    Science.gov (United States)

    Li, Si; Sun, Ya-Nan; Zhou, Yun-Tao; Zhang, Chun-Lai; Lu, Feng; Liu, Jia; Shang, Xiao-Ming

    2016-01-01

    Increasing evidence has suggested that microRNA (miRNA) may play a role in the pathogenesis of cardiovascular disease, which has led to a greater understanding of the complex pathophysiological processes underlying unstable angina (UA). The present study aimed to investigate changes in the miRNA expression profiles of patients with UA using gene-chip analysis, in order to further elucidate the pathogenesis of UA. Total RNA was extracted and purified from plasma samples collected from patients with UA and healthy controls. The samples underwent microarray analysis using an Exiqon miRCURY LNA™ microRNA Array. Differentially expressed miRNAs were identified by volcano plot filtering, and were validated using reverse transcription-quantitative polymerase chain reaction (RT-qPCR). In addition, functional annotation of the differentially expressed miRNAs involved gene ontology analyses. Among the 212 miRNAs differentially expressed between the two groups, 82 were upregulated and 130 were downregulated. Notably, the results of the RT-qPCR were consistent with the gene-chip results. The miRNAs identified in the present study may be potential novel biomarkers for the prevention and early diagnosis of UA. Furthermore, the results of the present study suggested that UA occurs as a result of complex and dynamic processes regulated by numerous factors, including multiple miRNAs.

  10. ExonMiner: Web service for analysis of GeneChip Exon array data

    OpenAIRE

    Imoto Seiya; Saito Ayumu; Nagasaki Masao; Yoshida Ryo; Numata Kazuyuki; Miyano Satoru

    2008-01-01

    Abstract Background Some splicing isoform-specific transcriptional regulations are related to disease. Therefore, detection of disease specific splice variations is the first step for finding disease specific transcriptional regulations. Affymetrix Human Exon 1.0 ST Array can measure exon-level expression profiles that are suitable to find differentially expressed exons in genome-wide scale. However, exon array produces massive datasets that are more than we can handle and analyze on personal...

  11. Wheat Allergy

    Science.gov (United States)

    ... and Luncheons Create Your Own Events Educational Events Wheat Allergy Wheat allergy is most common in children, ... texture you are trying to achieve. Differences between Wheat Allergy and Celiac Disease or Gluten Intolerance A ...

  12. Genome-wide analysis of antisense transcription with Affymetrix exon array

    Directory of Open Access Journals (Sweden)

    Jung Yong-chul

    2008-01-01

    Full Text Available Abstract Background A large number of natural antisense transcripts have been identified in human and mouse genomes. Study of their potential functions clearly requires cost-efficient method for expression analysis. Results Here we show that Affymetrix Exon arrays, which were designed to detect conventional transcripts in the sense orientation, can be used to monitor antisense expression across all exonic loci in mammalian genomes. Through modification of the cDNA synthesis protocol, we labeled single-strand cDNA in the reverse orientation as in the standard protocol, thus enabling the detection of antisense transcripts using the same array. Applying this technique to human Jurkat cells, we identified antisense transcription at 2,088 exonic loci of 1,516 UniGene clusters. Many of these antisense transcripts were not observed previously and some were validated by orientation-specific RT-PCR. Conclusion Our results suggest that with a modified protocol Affymetrix human, mouse and rat Exon arrays can be used as a routine method for genome-wide analysis of antisense transcription in these genomes.

  13. Accurate data processing improves the reliability of Affymetrix gene expression profiles from FFPE samples.

    Directory of Open Access Journals (Sweden)

    Maurizio Callari

    Full Text Available Formalin fixed paraffin-embedded (FFPE tumor specimens are the conventionally archived material in clinical practice, representing an invaluable tissue source for biomarkers development, validation and routine implementation. For many prospective clinical trials, this material has been collected allowing for a prospective-retrospective study design which represents a successful strategy to define clinical utility for candidate markers. Gene expression data can be obtained even from FFPE specimens with the broadly used Affymetrix HG-U133 Plus 2.0 microarray platform. Nevertheless, important major discrepancies remain in expression data obtained from FFPE compared to fresh-frozen samples, prompting the need for appropriate data processing which could help to obtain more consistent results in downstream analyses. In a publicly available dataset of matched frozen and FFPE expression data, the performances of different normalization methods and specifically designed Chip Description Files (CDFs were compared. The use of an alternative CDFs together with fRMA normalization significantly improved frozen-FFPE sample correlations, frozen-FFPE probeset correlations and agreement of differential analysis between different tumor subtypes. The relevance of our optimized data processing was assessed and validated using two independent datasets. In this study we demonstrated that an appropriate data processing can significantly improve the reliability of gene expression data derived from FFPE tissues using the standard Affymetrix platform. Tools for the implementation of our data processing algorithm are made publicly available at http://www.biocut.unito.it/cdf-ffpe/.

  14. μ-CS: An extension of the TM4 platform to manage Affymetrix binary data

    Directory of Open Access Journals (Sweden)

    Cannataro Mario

    2010-06-01

    Full Text Available Abstract Background A main goal in understanding cell mechanisms is to explain the relationship among genes and related molecular processes through the combined use of technological platforms and bioinformatics analysis. High throughput platforms, such as microarrays, enable the investigation of the whole genome in a single experiment. There exist different kind of microarray platforms, that produce different types of binary data (images and raw data. Moreover, also considering a single vendor, different chips are available. The analysis of microarray data requires an initial preprocessing phase (i.e. normalization and summarization of raw data that makes them suitable for use on existing platforms, such as the TIGR M4 Suite. Nevertheless, the annotations of data with additional information such as gene function, is needed to perform more powerful analysis. Raw data preprocessing and annotation is often performed in a manual and error prone way. Moreover, many available preprocessing tools do not support annotation. Thus novel, platform independent, and possibly open source tools enabling the semi-automatic preprocessing and annotation of microarray data are needed. Results The paper presents μ-CS (Microarray Cel file Summarizer, a cross-platform tool for the automatic normalization, summarization and annotation of Affymetrix binary data. μ-CS is based on a client-server architecture. The μ-CS client is provided both as a plug-in of the TIGR M4 platform and as a Java standalone tool and enables users to read, preprocess and analyse binary microarray data, avoiding the manual invocation of external tools (e.g. the Affymetrix Power Tools, the manual loading of preprocessing libraries, and the management of intermediate files. The μ-CS server automatically updates the references to the summarization and annotation libraries that are provided to the μ-CS client before the preprocessing. The μ-CS server is based on the web services technology

  15. ArrayInitiative - a tool that simplifies creating custom Affymetrix CDFs

    Directory of Open Access Journals (Sweden)

    Thompson Kevin J

    2011-05-01

    Full Text Available Abstract Background Probes on a microarray represent a frozen view of a genome and are quickly outdated when new sequencing studies extend our knowledge, resulting in significant measurement error when analyzing any microarray experiment. There are several bioinformatics approaches to improve probe assignments, but without in-house programming expertise, standardizing these custom array specifications as a usable file (e.g. as Affymetrix CDFs is difficult, owing mostly to the complexity of the specification file format. However, without correctly standardized files there is a significant barrier for testing competing analysis approaches since this file is one of the required inputs for many commonly used algorithms. The need to test combinations of probe assignments and analysis algorithms led us to develop ArrayInitiative, a tool for creating and managing custom array specifications. Results ArrayInitiative is a standalone, cross-platform, rich client desktop application for creating correctly formatted, custom versions of manufacturer-provided (default array specifications, requiring only minimal knowledge of the array specification rules and file formats. Users can import default array specifications, import probe sequences for a default array specification, design and import a custom array specification, export any array specification to multiple output formats, export the probe sequences for any array specification and browse high-level information about the microarray, such as version and number of probes. The initial release of ArrayInitiative supports the Affymetrix 3' IVT expression arrays we currently analyze, but as an open source application, we hope that others will contribute modules for other platforms. Conclusions ArrayInitiative allows researchers to create new array specifications, in a standard format, based upon their own requirements. This makes it easier to test competing design and analysis strategies that depend on probe

  16. ExonMiner: Web service for analysis of GeneChip Exon array data

    Directory of Open Access Journals (Sweden)

    Imoto Seiya

    2008-11-01

    Full Text Available Abstract Background Some splicing isoform-specific transcriptional regulations are related to disease. Therefore, detection of disease specific splice variations is the first step for finding disease specific transcriptional regulations. Affymetrix Human Exon 1.0 ST Array can measure exon-level expression profiles that are suitable to find differentially expressed exons in genome-wide scale. However, exon array produces massive datasets that are more than we can handle and analyze on personal computer. Results We have developed ExonMiner that is the first all-in-one web service for analysis of exon array data to detect transcripts that have significantly different splicing patterns in two cells, e.g. normal and cancer cells. ExonMiner can perform the following analyses: (1 data normalization, (2 statistical analysis based on two-way ANOVA, (3 finding transcripts with significantly different splice patterns, (4 efficient visualization based on heatmaps and barplots, and (5 meta-analysis to detect exon level biomarkers. We implemented ExonMiner on a supercomputer system in order to perform genome-wide analysis for more than 300,000 transcripts in exon array data, which has the potential to reveal the aberrant splice variations in cancer cells as exon level biomarkers. Conclusion ExonMiner is well suited for analysis of exon array data and does not require any installation of software except for internet browsers. What all users need to do is to access the ExonMiner URL http://ae.hgc.jp/exonminer. Users can analyze full dataset of exon array data within hours by high-level statistical analysis with sound theoretical basis that finds aberrant splice variants as biomarkers.

  17. ExonMiner: Web service for analysis of GeneChip Exon array data

    Science.gov (United States)

    Numata, Kazuyuki; Yoshida, Ryo; Nagasaki, Masao; Saito, Ayumu; Imoto, Seiya; Miyano, Satoru

    2008-01-01

    Background Some splicing isoform-specific transcriptional regulations are related to disease. Therefore, detection of disease specific splice variations is the first step for finding disease specific transcriptional regulations. Affymetrix Human Exon 1.0 ST Array can measure exon-level expression profiles that are suitable to find differentially expressed exons in genome-wide scale. However, exon array produces massive datasets that are more than we can handle and analyze on personal computer. Results We have developed ExonMiner that is the first all-in-one web service for analysis of exon array data to detect transcripts that have significantly different splicing patterns in two cells, e.g. normal and cancer cells. ExonMiner can perform the following analyses: (1) data normalization, (2) statistical analysis based on two-way ANOVA, (3) finding transcripts with significantly different splice patterns, (4) efficient visualization based on heatmaps and barplots, and (5) meta-analysis to detect exon level biomarkers. We implemented ExonMiner on a supercomputer system in order to perform genome-wide analysis for more than 300,000 transcripts in exon array data, which has the potential to reveal the aberrant splice variations in cancer cells as exon level biomarkers. Conclusion ExonMiner is well suited for analysis of exon array data and does not require any installation of software except for internet browsers. What all users need to do is to access the ExonMiner URL . Users can analyze full dataset of exon array data within hours by high-level statistical analysis with sound theoretical basis that finds aberrant splice variants as biomarkers. PMID:19036125

  18. OpenADAM: an open source genome-wide association data management system for Affymetrix SNP arrays

    Directory of Open Access Journals (Sweden)

    Sham P C

    2008-12-01

    Full Text Available Abstract Background Large scale genome-wide association studies have become popular since the introduction of high throughput genotyping platforms. Efficient management of the vast array of data generated poses many challenges. Description We have developed an open source web-based data management system for the large amount of genotype data generated from the Affymetrix GeneChip® Mapping Array and Affymetrix Genome-Wide Human SNP Array platforms. The database supports genotype calling using DM, BRLMM, BRLMM-P or Birdseed algorithms provided by the Affymetrix Power Tools. The genotype and corresponding pedigree data are stored in a relational database for efficient downstream data manipulation and analysis, such as calculation of allele and genotype frequencies, sample identity checking, and export of genotype data in various file formats for analysis using commonly-available software. A novel method for genotyping error estimation is implemented using linkage disequilibrium information from the HapMap project. All functionalities are accessible via a web-based user interface. Conclusion OpenADAM provides an open source database system for management of Affymetrix genome-wide association SNP data.

  19. Wheat Woes

    Institute of Scientific and Technical Information of China (English)

    2010-01-01

    Soaringwheat prices are unlikely to endanger globalgrain security chicago wheat futures began to skyrocket in early June, jumping 62 percent and reaching their highest level since September 2008. In Russia,wheat prices increased 70 percent recently.And Europe’s wheat prices also rose 8 percent within a short time.

  20. Wheat Woes

    Institute of Scientific and Technical Information of China (English)

    DING SHENGJUN

    2010-01-01

    @@ Chicago wheat futures began to skyrocket in early June,jumping 62 percent and reaching their highest level since September 2008. In Russia, wheat prices increased 70 percent recently. And Europe's wheat prices also rose 8 percent within a short time.

  1. The Affymetrix DMET Plus Platform Reveals Unique Distribution of ADME-Related Variants in Ethnic Arabs

    Directory of Open Access Journals (Sweden)

    Salma M. Wakil

    2015-01-01

    Full Text Available Background. The Affymetrix Drug Metabolizing Enzymes and Transporters (DMET Plus Premier Pack has been designed to genotype 1936 gene variants thought to be essential for screening patients in personalized drug therapy. These variants include the cytochrome P450s (CYP450s, the key metabolizing enzymes, many other enzymes involved in phase I and phase II pharmacokinetic reactions, and signaling mediators associated with variability in clinical response to numerous drugs not only among individuals, but also between ethnic populations. Materials and Methods. We genotyped 600 Saudi individuals for 1936 variants on the DMET platform to evaluate their clinical potential in personalized medicine in ethnic Arabs. Results. Approximately 49% each of the 437 CYP450 variants, 56% of the 581 transporters, 56% of 419 transferases, 48% of the 104 dehydrogenases, and 58% of the remaining 390 variants were detected. Several variants, such as rs3740071, rs6193, rs258751, rs6199, rs11568421, and rs8187797, exhibited significantly either higher or lower minor allele frequencies (MAFs than those in other ethnic groups. Discussion. The present study revealed some unique distribution trends for several variants in Arabs, which displayed partly inverse allelic prevalence compared to other ethnic populations. The results point therefore to the need to verify and ascertain the prevalence of a variant as a prerequisite for engaging it in clinical routine screening in personalized medicine in any given population.

  2. ChIP-on-chip analysis methods for Affymetrix tiling arrays.

    Science.gov (United States)

    Yoder, Sean J

    2015-01-01

    Although the ChIP-sequencing has gained significant attraction recently, ChIP analysis using microarrays is still an attractive option due to the low cost, ease of analysis, and access to legacy and public data sets. The analysis of ChIP-Chip data entails a multistep approach that requires several different applications to progress from the initial stages of raw data analysis to the identification and characterization of ChIP binding sites. There are multiple approaches to data analysis and there are several applications available for each stage of the analysis pipeline. Each application must be evaluated for its suitability for the particular experiment as well as the investigator's background with computational tools. This chapter is a review of the commonly available applications for Affymetrix ChIP-Chip data analysis, as well as the general workflow of a ChIP-Chip analysis approach. The purpose of the chapter is to allow the researcher to better select the appropriate applications and provide them with the direction necessary to proceed with a ChIP-Chip analysis.

  3. affyPara-a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data.

    Science.gov (United States)

    Schmidberger, Markus; Vicedo, Esmeralda; Mansmann, Ulrich

    2009-07-22

    Microarray data repositories as well as large clinical applications of gene expression allow to analyse several hundreds of microarrays at one time. The preprocessing of large amounts of microarrays is still a challenge. The algorithms are limited by the available computer hardware. For example, building classification or prognostic rules from large microarray sets will be very time consuming. Here, preprocessing has to be a part of the cross-validation and resampling strategy which is necessary to estimate the rule's prediction quality honestly.This paper proposes the new Bioconductor package affyPara for parallelized preprocessing of Affymetrix microarray data. Partition of data can be applied on arrays and parallelization of algorithms is a straightforward consequence. The partition of data and distribution to several nodes solves the main memory problems and accelerates preprocessing by up to the factor 20 for 200 or more arrays.affyPara is a free and open source package, under GPL license, available form the Bioconductor project at www.bioconductor.org. A user guide and examples are provided with the package.

  4. High Fidelity Copy Number Analysis of Formalin-Fixed and Paraffin-Embedded Tissues Using Affymetrix Cytoscan HD Chip

    OpenAIRE

    Yu, Yan P.; Amantha Michalopoulos; Ying Ding; George Tseng; Jian-Hua Luo

    2014-01-01

    Detection of human genome copy number variation (CNV) is one of the most important analyses in diagnosing human malignancies. Genome CNV detection in formalin-fixed and paraffin-embedded (FFPE) tissues remains challenging due to suboptimal DNA quality and failure to use appropriate baseline controls for such tissues. Here, we report a modified method in analyzing CNV in FFPE tissues using microarray with Affymetrix Cytoscan HD chips. Gel purification was applied to select DNA with good qualit...

  5. ‘maskBAD’ – a package to detect and remove Affymetrix probes with binding affinity differences

    Directory of Open Access Journals (Sweden)

    Dannemann Michael

    2012-04-01

    Full Text Available Abstract Background Hybridization differences caused by target sequence differences can be a confounding factor in analyzing gene expression on microarrays, lead to false positives and reduce power to detect real expression differences. We prepared an R Bioconductor compatible package to detect, characterize and remove such probes in Affymetrix 3’IVT and exon-based arrays on the basis of correlation of signal intensities from probes within probe sets. Results Using completely mouse genomes we determined type 1 (false negatives and type 2 (false positives errors with high accuracy and we show that our method routinely outperforms previous methods. When detecting 76.2% of known SNP/indels in mouse expression data, we obtain at most 5.5% false positives. At the same level of false positives, best previous method detected 72.6%. We also show that probes with differing binding affinity both hinder differential expression detection and introduce artifacts in cancer-healthy tissue comparison. Conclusions Detection and removal of such probes should be a routine step in Affymetrix data preprocessing. We prepared a user friendly R package, compatible with Bioconductor, that allows the filtering and improving of data from Affymetrix microarrays experiments.

  6. Eat Wheat!

    Science.gov (United States)

    Idaho Wheat Commission, Boise.

    This pamphlet contains puzzles, games, and a recipe designed to teach elementary school pupils about wheat. It includes word games based on the U.S. Department of Agriculture Food Guide Pyramid and on foods made from wheat. The Food Guide Pyramid can be cut out of the pamphlet and assembled as a three-dimensional information source and food guide.…

  7. Wheat Newsletter

    Science.gov (United States)

    This review was written for readers of the Annual Wheat Newsletter, Volume 53. It summarizes activities on wheat research during 2006 at the U.S. Grain Marketing Research Laboratory (USGMRL). The article includes technical abstracts of research accomplishments from the Grain Quality and Structure ...

  8. High fidelity copy number analysis of formalin-fixed and paraffin-embedded tissues using Affymetrix Cytoscan HD chip.

    Directory of Open Access Journals (Sweden)

    Yan P Yu

    Full Text Available Detection of human genome copy number variation (CNV is one of the most important analyses in diagnosing human malignancies. Genome CNV detection in formalin-fixed and paraffin-embedded (FFPE tissues remains challenging due to suboptimal DNA quality and failure to use appropriate baseline controls for such tissues. Here, we report a modified method in analyzing CNV in FFPE tissues using microarray with Affymetrix Cytoscan HD chips. Gel purification was applied to select DNA with good quality and data of fresh frozen and FFPE tissues from healthy individuals were included as baseline controls in our data analysis. Our analysis showed a 91% overlap between CNV detection by microarray with FFPE tissues and chromosomal abnormality detection by karyotyping with fresh tissues on 8 cases of lymphoma samples. The CNV overlap between matched frozen and FFPE tissues reached 93.8%. When the analyses were restricted to regions containing genes, 87.1% concordance between FFPE and fresh frozen tissues was found. The analysis was further validated by Fluorescence In Situ Hybridization on these samples using probes specific for BRAF and CITED2. The results suggested that the modified method using Affymetrix Cytoscan HD chip gave rise to a significant improvement over most of the previous methods in terms of accuracy in detecting CNV in FFPE tissues. This FFPE microarray methodology may hold promise for broad application of CNV analysis on clinical samples.

  9. Wheat: The Whole Story.

    Science.gov (United States)

    Oklahoma State Dept. of Education, Oklahoma City.

    This publication presents information on wheat. Wheat was originally a wild grass and not native to the United States. Wheat was not planted there until 1777 (and then only as a hobby crop). Wheat is grown on more acres than any other grain in this country. Soft wheats are grown east of the Mississippi River, and hard wheats are grown west of the…

  10. Gene-chip studies of adipogenesis-regulated microRNAs in mouse primary adipocytes and human obesity

    Directory of Open Access Journals (Sweden)

    Gallagher Iain J

    2011-03-01

    Full Text Available Abstract Background Adipose tissue abundance relies partly on the factors that regulate adipogenesis, i.e. proliferation and differentiation of adipocytes. While components of the transcriptional program that initiates adipogenesis is well-known, the importance of microRNAs in adipogenesis is less well studied. We thus set out to investigate whether miRNAs would be actively modulated during adipogenesis and obesity. Methods Several models exist to study adipogenesis in vitro, of which the cell line 3T3-L1 is the most well known, albeit not the most physiologically appropriate. Thus, as an alternative, we produced EXIQON microarray of brown and white primary murine adipocytes (prior to and following differentiation to yield global profiles of miRNAs. Results We found 65 miRNAs regulated during in vitro adipogenesis in primary adipocytes. We evaluated the similarity of our responses to those found in non-primary cell models, through literature data-mining. When comparing primary adipocyte profiles, with those of cell lines reported in the literature, we found a high degree of difference in 'adipogenesis' regulated miRNAs suggesting that the model systems may not be accurately representing adipogenesis. The expression of 10 adipogenesis-regulated miRNAs were studied using real-time qPCR and then we selected 5 miRNAs, that showed robust expression, were profiled in subcutaneous adipose tissue obtained from 20 humans with a range of body mass indices (BMI, range = 21-48, and all samples have U133+2 Affymetrix profiles provided. Of the miRNAs tested, mir-21 was robustly expressed in human adipose tissue and positively correlated with BMI (R2 = 0.49, p Conclusion In conclusion, we provide a preliminary analysis of miRNAs associated with primary cell in vitro adipogenesis and demonstrate that the inflammation-associated miRNA, mir-21 is up-regulated in subcutaneous adipose tissue in human obesity. Further, we provide a novel transcriptomics database of

  11. inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO.

    Science.gov (United States)

    Taminau, Jonatan; Steenhoff, David; Coletta, Alain; Meganck, Stijn; Lazar, Cosmin; de Schaetzen, Virginie; Duque, Robin; Molter, Colin; Bersini, Hugues; Nowé, Ann; Weiss Solís, David Y

    2011-11-15

    Microarray technology has become an integral part of biomedical research and increasing amounts of datasets become available through public repositories. However, re-use of these datasets is severely hindered by unstructured, missing or incorrect biological samples information; as well as the wide variety of preprocessing methods in use. The inSilicoDb R/Bioconductor package is a command-line front-end to the InSilico DB, a web-based database currently containing 86 104 expert-curated human Affymetrix expression profiles compiled from 1937 GEO repository series. The use of this package builds on the Bioconductor project's focus on reproducibility by enabling a clear workflow in which not only analysis, but also the retrieval of verified data is supported.

  12. Dissecting an alternative splicing analysis workflow for GeneChip® Exon 1.0 ST Affymetrix arrays

    Directory of Open Access Journals (Sweden)

    Calogero Raffaele A

    2008-11-01

    Full Text Available Abstract Background A new microarray platform (GeneChip® Exon 1.0 ST has recently been developed by Affymetrix http://www.affymetrix.com. This microarray platform changes the conventional view of transcript analysis since it allows the evaluation of the expression level of a transcript by querying each exon component. The Exon 1.0 ST platform does however raise some issues regarding the approaches to be used in identifying genome-wide alternative splicing events (ASEs. In this study an exon-level data analysis workflow is dissected in order to detect limit and strength of each step, thus modifying the overall workflow and thereby optimizing the detection of ASEs. Results This study was carried out using a semi-synthetic exon-skipping benchmark experiment embedding a total of 268 exon skipping events. Our results point out that summarization methods (RMA, PLIER do not affect the efficacy of statistical tools in detecting ASEs. However, data pre-filtering is mandatory if the detected number of false ASEs are to be reduced. MiDAS and Rank Product methods efficiently detect true ASEs but they suffer from the lack of multiple test error correction. The intersection of MiDAS and Rank Product results efficiently moderates the detection of false ASEs. Conclusion To optimize the detection of ASEs we propose the following workflow: i data pre-filtering, ii statistical selection of ASEs using both MiDAS and Rank Product, iii intersection of results derived from the two statistical analyses in order to moderate family-wise errors (FWER.

  13. High-throughput identification of ionizing radiation-sensitive plant genes and development of radiation indicator plant and radiation sensing Genechip

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Dong Sub; Kim, Jinbaek; Ha, Bokeun; Kim, Sang Hoon; Kim, Sunhee

    2013-05-15

    Physiological analysis of monocot model plant (rice) in response to ionizing radiation (cosmic-ray, gamma-ray, Ion beam). - Identification of antioxidant characters through cytochemical analysis. - Comparison of antioxidant activities in response to ionizing irradiation. - Evaluation of anthocyanin quantity in response to ionizing irradiation. Ionization energy response gene family analysis via bioinformatic validation. - Expression analysis of monocot and dicot gene families. - In silico and bioinformatic approach to elucidate gene function. Characterization and functional analysis of genes specifically expressed in response to ionizing irradiation (cosmic-ray, gamma-ray, Ion beam). - High throughput trancriptomic analysis of plants under ionizing radiation using microarray. - Promotor and cis-element analysis of genes specifically expressed in response to ionizing radiation. - Validation and function analysis of candidate genes. - Elucidation of plant mechanism of sensing and response to ionization energy. Development of bioindicator plants detecting ionization energy. - Cloning and identification of 'Radio marker genes (RMG)'. - Development of Over-expression (O/E) or Knock-out (K/O) plant using RMG. Development of Genechip as an ionization energy detector. - Expression profiling analysis of genes specifically expression in response to ionization energy. - Prepare high-conserved gene specific oligomer. - Development of ionization energy monitoring Genechip and application.

  14. Transcriptome analysis reveals key differentially expressed genes involved in wheat grain development

    Institute of Scientific and Technical Information of China (English)

    Yonglong Yu; Dong Zhu; Chaoying Ma; Hui Cao; Yaping Wang; Yanhao Xu; Wenying Zhang; Yueming Yan

    2016-01-01

    Wheat seed development is an important physiological process of seed maturation and directly affects wheat yield and quality. In this study, we performed dynamic transcriptome microarray analysis of an elite Chinese bread wheat cultivar (Jimai 20) during grain development using the GeneChip Wheat Genome Array. Grain morphology and scanning electron microscope observations showed that the period of 11–15 days post-anthesis (DPA) was a key stage for the synthesis and accumulation of seed starch. Genome-wide transcriptional profiling and significance analysis of microarrays revealed that the period from 11 to 15 DPA was more important than the 15–20 DPA stage for the synthesis and accumulation of nutritive reserves. Series test of cluster analysis of differential genes revealed five statistically significant gene expression profiles. Gene ontology annotation and enrichment analysis gave further informa-tion about differentially expressed genes, and MapMan analysis revealed expression changes within functional groups during seed development. Metabolic pathway network analysis showed that major and minor metabolic pathways regulate one another to ensure regular seed development and nutritive reserve accumulation. We performed gene co-expression network analysis to identify genes that play vital roles in seed development and identified several key genes involved in important metabolic pathways. The transcriptional expression of eight key genes involved in starch and protein synthesis and stress defense was further validated by qRT-PCR. Our results provide new insight into the molecular mechanisms of wheat seed development and the determinants of yield and quality.

  15. Transcriptome analysis reveals key differentially expressed genes involved in wheat grain development

    Directory of Open Access Journals (Sweden)

    Yonglong Yu

    2016-04-01

    Full Text Available Wheat seed development is an important physiological process of seed maturation and directly affects wheat yield and quality. In this study, we performed dynamic transcriptome microarray analysis of an elite Chinese bread wheat cultivar (Jimai 20 during grain development using the GeneChip Wheat Genome Array. Grain morphology and scanning electron microscope observations showed that the period of 11–15 days post-anthesis (DPA was a key stage for the synthesis and accumulation of seed starch. Genome-wide transcriptional profiling and significance analysis of microarrays revealed that the period from 11 to 15 DPA was more important than the 15–20 DPA stage for the synthesis and accumulation of nutritive reserves. Series test of cluster analysis of differential genes revealed five statistically significant gene expression profiles. Gene ontology annotation and enrichment analysis gave further information about differentially expressed genes, and MapMan analysis revealed expression changes within functional groups during seed development. Metabolic pathway network analysis showed that major and minor metabolic pathways regulate one another to ensure regular seed development and nutritive reserve accumulation. We performed gene co-expression network analysis to identify genes that play vital roles in seed development and identified several key genes involved in important metabolic pathways. The transcriptional expression of eight key genes involved in starch and protein synthesis and stress defense was further validated by qRT-PCR. Our results provide new insight into the molecular mechanisms of wheat seed development and the determinants of yield and quality.

  16. Pushing Wheat

    DEFF Research Database (Denmark)

    Sharp, Paul Richard

    This paper documents the evolution of variables central to understanding the creation of an Atlantic Economy in wheat between the US and the UK in the nineteenth century. The cointegrated VAR model is then applied to the period 1838-1913 in order to find long-run relationships between...... these variables. The main result is that explanations for the expansion of trade based on falling barriers to trade need to be augmented by another factor: the expansion of US supply. This implies that the growth of the Atlantic Economy cannot wholly be attributed to the decline in transportation costs...

  17. Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data

    Directory of Open Access Journals (Sweden)

    Gruber Stephen B

    2005-02-01

    given greater consideration when comparing Affymetrix processing methods.

  18. Distinct molecular phenotype of inflammatory breast cancer compared to non-inflammatory breast cancer using Affymetrix-based genome-wide gene-expression analysis

    OpenAIRE

    Van Laere, S; Van der Auwera, I; Van den Eynden, G; Van Hummelen, P; van Dam, P; Van Marck, E; Vermeulen, P B; Dirix, L

    2007-01-01

    The present study aims at a platform-independent confirmation of previously obtained cDNA microarray results on inflammatory breast cancer (IBC) using Affymetrix chips. Gene-expression data of 19 IBC and 40 non-IBC specimens were subjected to clustering and principal component analysis. The performance of a previously identified IBC signature was tested using clustering and gene set enrichment analysis. The presence of different cell-of-origin subtypes in IBC was investigated and confirmed us...

  19. Relative impact of key sources of systematic noise in Affymetrix and Illumina gene-expression microarray experiments

    Directory of Open Access Journals (Sweden)

    Kitchen Robert R

    2011-12-01

    Full Text Available Abstract Background Systematic processing noise, which includes batch effects, is very common in microarray experiments but is often ignored despite its potential to confound or compromise experimental results. Compromised results are most likely when re-analysing or integrating datasets from public repositories due to the different conditions under which each dataset is generated. To better understand the relative noise-contributions of various factors in experimental-design, we assessed several Illumina and Affymetrix datasets for technical variation between replicate hybridisations of Universal Human Reference (UHRR and individual or pooled breast-tumour RNA. Results A varying degree of systematic noise was observed in each of the datasets, however in all cases the relative amount of variation between standard control RNA replicates was found to be greatest at earlier points in the sample-preparation workflow. For example, 40.6% of the total variation in reported expressions were attributed to replicate extractions, compared to 13.9% due to amplification/labelling and 10.8% between replicate hybridisations. Deliberate probe-wise batch-correction methods were effective in reducing the magnitude of this variation, although the level of improvement was dependent on the sources of noise included in the model. Systematic noise introduced at the chip, run, and experiment levels of a combined Illumina dataset were found to be highly dependant upon the experimental design. Both UHRR and pools of RNA, which were derived from the samples of interest, modelled technical variation well although the pools were significantly better correlated (4% average improvement and better emulated the effects of systematic noise, over all probes, than the UHRRs. The effect of this noise was not uniform over all probes, with low GC-content probes found to be more vulnerable to batch variation than probes with a higher GC-content. Conclusions The magnitude of systematic

  20. Proteomics of Wheat Flour

    Science.gov (United States)

    Wheat is a major food crop grown on more than 215 million hectares of land throughout the world. Wheat flour provides an important source of protein for human nutrition and is used as a principal ingredient in a wide range of food products, largely because wheat flour, when mixed with water, has un...

  1. Wheat: Science and Trade

    Science.gov (United States)

    This is for a book review of Wheat: science and trade, edited by B.F. Carver. The book provides an indepth review of wheat biology, production, breeding, processing, and trade and is organized in four sections. "Making of a Wheat Plant" reviews domestication, evolution, development, and molecular ...

  2. Wheat and gluten intolerance

    NARCIS (Netherlands)

    Busink-van den Broeck, Hetty; Gilissen, L.J.W.J.; Brouns, F.

    2016-01-01

    With this White Paper, the current state of scientific knowledge on human disorders related to gluten and wheat is presented, with reference to other grains such as spelt, barley, rye, and oats. Backgrounds are described of coeliac disease (gluten intolerance), wheat allergies and any kind of wheat

  3. Gene and protein expression proifling analysis of young spike development in large spike wheat germplasms

    Institute of Scientific and Technical Information of China (English)

    CHEN Dan; ZHANG Jin-peng; LIU Wei-hua; WU Xiao-yang; YANGXin-ming; LIXiu-quan; LUYu-qing; LI Li-hui

    2016-01-01

    The wheat grain number per spike (GNPS) is a major yield-limiting factor in wheat-breeding programs. Germplasms with a high GNPS are therefore valuable for increasing wheat yield potential. To investigate the molecular characteristics of young spike development in large-spike wheat germplasms with high GNPS, we performed gene and protein expression proifling analysis with three high-GNPS wheat lines (Pubing 3228, Pubing 3504 and 4844-12) and one low-GNPS control variety (Fukuho). The phenotypic data for the spikes in two growth seasons showed that the GNPS of the three large-spike wheat lines were signiifcantly higher than that of the Fukuho control line. The Affymetrix wheat chip and isobaric tags for relative and absolute quantitation-tandam mass spectrometry (iTRAQ-MS/MS) technology were employed for gene and protein expression proifling analyses of young spike development, respectively, at the lforet primordia differentiation stage. A total of 598 differentialy expressed transcripts (270 up-regulated and 328 down-regulated) and 280 proteins (122 up-regulated and 158 down-regulated) were identiifed in the three high-GNPS lines compared with the control line. We found that the expression of some lforal development-related genes, includingWknox1b, theAP2 domain protein kinase and the transcription factorHUA2, were up-regulated in the high-GNPS lines. The expression of theSHEPHERD (SHD) gene was up-regulated at both the transcript and protein levels. Overal, these results suggest that multiple regulatory pathways, including theCLAVATApathway and the meristem-maintaining KNOX protein pathway, take part in the development of the high-GNPS phenotype in our wheat germplasms.

  4. Comparative transcriptomics in the Triticeae

    Directory of Open Access Journals (Sweden)

    Waugh Robbie

    2009-06-01

    Full Text Available Abstract Background Barley and particularly wheat are two grass species of immense agricultural importance. In spite of polyploidization events within the latter, studies have shown that genotypically and phenotypically these species are very closely related and, indeed, fertile hybrids can be created by interbreeding. The advent of two genome-scale Affymetrix GeneChips now allows studies of the comparison of their transcriptomes. Results We have used the Wheat GeneChip to create a "gene expression atlas" for the wheat transcriptome (cv. Chinese Spring. For this, we chose mRNA from a range of tissues and developmental stages closely mirroring a comparable study carried out for barley (cv. Morex using the Barley1 GeneChip. This, together with large-scale clustering of the probesets from the two GeneChips into "homologous groups", has allowed us to perform a genomic-scale comparative study of expression patterns in these two species. We explore the influence of the polyploidy of wheat on the results obtained with the Wheat GeneChip and quantify the correlation between conservation in gene sequence and gene expression in wheat and barley. In addition, we show how the conservation of expression patterns can be used to elucidate, probeset by probeset, the reliability of the Wheat GeneChip. Conclusion While there are many differences in expression on the level of individual genes and tissues, we demonstrate that the wheat and barley transcriptomes appear highly correlated. This finding is significant not only because given small evolutionary distance between the two species it is widely expected, but also because it demonstrates that it is possible to use the two GeneChips for comparative studies. This is the case even though their probeset composition reflects rather different design principles as well as, of course, the present incomplete knowledge of the gene content of the two species. We also show that, in general, the Wheat GeneChip is not able

  5. WheatGenome.info: A Resource for Wheat Genomics Resource.

    Science.gov (United States)

    Lai, Kaitao

    2016-01-01

    An integrated database with a variety of Web-based systems named WheatGenome.info hosting wheat genome and genomic data has been developed to support wheat research and crop improvement. The resource includes multiple Web-based applications, which are implemented as a variety of Web-based systems. These include a GBrowse2-based wheat genome viewer with BLAST search portal, TAGdb for searching wheat second generation genome sequence data, wheat autoSNPdb, links to wheat genetic maps using CMap and CMap3D, and a wheat genome Wiki to allow interaction between diverse wheat genome sequencing activities. This portal provides links to a variety of wheat genome resources hosted at other research organizations. This integrated database aims to accelerate wheat genome research and is freely accessible via the web interface at http://www.wheatgenome.info/ . PMID:26519407

  6. Identification of biomarkers regulated by rexinoids (LGD1069, LG100268 and Ro25-7386) in human breast cells using Affymetrix microarray.

    Science.gov (United States)

    Seo, Hye-Sook; Woo, Jong-Kyu; Shin, Yong Cheol; Ko, Seong-Gyu

    2015-07-01

    Retinoids possess anti-proliferative properties, which suggests that they possess chemopreventive and therapeutic potential against cancer. In the current study, genes modulated by rexinoids (retinoid X receptor (RXR)-pan agonists, LGD1069 and LG100268; and the RXRα agonist, Ro25-7386) were identified using an Affymetrix microarray in normal and malignant breast cells. It was observed that LGD1069, LG100268 and Ro25-7386 suppressed the growth of breast cells. Secondly, several rexinoid-regulated genes were identified, which are involved in cell death, cell growth/maintenance, signal transduction and response to stimulus. These genes may be associated with the growth-suppressive activity of rexinoids. Therefore, the identified genes may serve as biomarkers and novel molecular targets for the prevention and treatment of breast cancer.

  7. GeneChip expression profiling reveals the alterations of energy metabolism related genes in osteocytes under large gradient high magnetic fields.

    Directory of Open Access Journals (Sweden)

    Yang Wang

    Full Text Available The diamagnetic levitation as a novel ground-based model for simulating a reduced gravity environment has recently been applied in life science research. In this study a specially designed superconducting magnet with a large gradient high magnetic field (LG-HMF, which can provide three apparent gravity levels (μ-g, 1-g, and 2-g, was used to simulate a space-like gravity environment. Osteocyte, as the most important mechanosensor in bone, takes a pivotal position in mediating the mechano-induced bone remodeling. In this study, the effects of LG-HMF on gene expression profiling of osteocyte-like cell line MLO-Y4 were investigated by Affymetrix DNA microarray. LG-HMF affected osteocyte gene expression profiling. Differentially expressed genes (DEGs and data mining were further analyzed by using bioinfomatic tools, such as DAVID, iReport. 12 energy metabolism related genes (PFKL, AK4, ALDOC, COX7A1, STC1, ADM, CA9, CA12, P4HA1, APLN, GPR35 and GPR84 were further confirmed by real-time PCR. An integrated gene interaction network of 12 DEGs was constructed. Bio-data mining showed that genes involved in glucose metabolic process and apoptosis changed notablly. Our results demostrated that LG-HMF affected the expression of energy metabolism related genes in osteocyte. The identification of sensitive genes to special environments may provide some potential targets for preventing and treating bone loss or osteoporosis.

  8. GeneChip expression profiling reveals the alterations of energy metabolism related genes in osteocytes under large gradient high magnetic fields.

    Science.gov (United States)

    Wang, Yang; Chen, Zhi-Hao; Yin, Chun; Ma, Jian-Hua; Li, Di-Jie; Zhao, Fan; Sun, Yu-Long; Hu, Li-Fang; Shang, Peng; Qian, Ai-Rong

    2015-01-01

    The diamagnetic levitation as a novel ground-based model for simulating a reduced gravity environment has recently been applied in life science research. In this study a specially designed superconducting magnet with a large gradient high magnetic field (LG-HMF), which can provide three apparent gravity levels (μ-g, 1-g, and 2-g), was used to simulate a space-like gravity environment. Osteocyte, as the most important mechanosensor in bone, takes a pivotal position in mediating the mechano-induced bone remodeling. In this study, the effects of LG-HMF on gene expression profiling of osteocyte-like cell line MLO-Y4 were investigated by Affymetrix DNA microarray. LG-HMF affected osteocyte gene expression profiling. Differentially expressed genes (DEGs) and data mining were further analyzed by using bioinfomatic tools, such as DAVID, iReport. 12 energy metabolism related genes (PFKL, AK4, ALDOC, COX7A1, STC1, ADM, CA9, CA12, P4HA1, APLN, GPR35 and GPR84) were further confirmed by real-time PCR. An integrated gene interaction network of 12 DEGs was constructed. Bio-data mining showed that genes involved in glucose metabolic process and apoptosis changed notablly. Our results demostrated that LG-HMF affected the expression of energy metabolism related genes in osteocyte. The identification of sensitive genes to special environments may provide some potential targets for preventing and treating bone loss or osteoporosis. PMID:25635858

  9. 21 CFR 137.195 - Crushed wheat.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Crushed wheat. 137.195 Section 137.195 Food and... Related Products § 137.195 Crushed wheat. Crushed wheat, coarse ground wheat, is the food prepared by so crushing cleaned wheat other than durum wheat and red durum wheat that, when tested by the...

  10. Simulation of wheat ontogenesis.

    NARCIS (Netherlands)

    Miglietta, F.

    1992-01-01

    The main purpose of this study is to understand wheat ontogenesis and to formulate a simulation model of the development of wheat for application under field conditions. The basic idea that is behind this work is that plant development can be accurately simulated on the basis of leaf appearance prov

  11. MEASUREMENT OF WHEAT DENSITY

    Institute of Scientific and Technical Information of China (English)

    冯跟胜; 党金春; 等

    1995-01-01

    A method used for on line determining the change of wheat density with a automatic watering machine in a lqarge flour mill has been studied.The results show that the higher distinguishing ability is obtained when using 241Am as a γ-ray source for measuring the wheat density than using 137Cs.

  12. Genotype-dependent Burst of Transposable Element Expression in Crowns of Hexaploid Wheat (Triticum aestivum L. during Cold Acclimation

    Directory of Open Access Journals (Sweden)

    Debbie Laudencia-Chingcuanco

    2012-01-01

    Full Text Available The expression of 1,613 transposable elements (TEs represented in the Affymetrix Wheat Genome Chip was examined during cold treatment in crowns of four hexaploid wheat genotypes that vary in tolerance to cold and in flowering time. The TE expression profiles showed a constant level of expression throughout the experiment in three of the genotypes. In winter Norstar, the most cold-hardy of the four genotypes, a subset of the TEs showed a burst of expression after vernalization saturation was achieved. About 47% of the TEs were expressed, and both Class I (retrotransposons and Class II (DNA transposons types were well represented. Gypsy and Copia were the most represented among the retrotransposons while CACTA and Mariner were the most represented DNA transposons. The data suggests that the Vrn-A1 region plays a role in the stage-specific induction of TE expression in this genotype.

  13. Characterization of Capsicum annuum genetic diversity and population structure based on parallel polymorphism discovery with a 30K unigene Pepper GeneChip.

    Directory of Open Access Journals (Sweden)

    Theresa A Hill

    Full Text Available The widely cultivated pepper, Capsicum spp., important as a vegetable and spice crop world-wide, is one of the most diverse crops. To enhance breeding programs, a detailed characterization of Capsicum diversity including morphological, geographical and molecular data is required. Currently, molecular data characterizing Capsicum genetic diversity is limited. The development and application of high-throughput genome-wide markers in Capsicum will facilitate more detailed molecular characterization of germplasm collections, genetic relationships, and the generation of ultra-high density maps. We have developed the Pepper GeneChip® array from Affymetrix for polymorphism detection and expression analysis in Capsicum. Probes on the array were designed from 30,815 unigenes assembled from expressed sequence tags (ESTs. Our array design provides a maximum redundancy of 13 probes per base pair position allowing integration of multiple hybridization values per position to detect single position polymorphism (SPP. Hybridization of genomic DNA from 40 diverse C. annuum lines, used in breeding and research programs, and a representative from three additional cultivated species (C. frutescens, C. chinense and C. pubescens detected 33,401 SPP markers within 13,323 unigenes. Among the C. annuum lines, 6,426 SPPs covering 3,818 unigenes were identified. An estimated three-fold reduction in diversity was detected in non-pungent compared with pungent lines, however, we were able to detect 251 highly informative markers across these C. annuum lines. In addition, an 8.7 cM region without polymorphism was detected around Pun1 in non-pungent C. annuum. An analysis of genetic relatedness and diversity using the software Structure revealed clustering of the germplasm which was confirmed with statistical support by principle components analysis (PCA and phylogenetic analysis. This research demonstrates the effectiveness of parallel high-throughput discovery and

  14. Characterization of Capsicum annuum genetic diversity and population structure based on parallel polymorphism discovery with a 30K unigene Pepper GeneChip.

    Science.gov (United States)

    Hill, Theresa A; Ashrafi, Hamid; Reyes-Chin-Wo, Sebastian; Yao, JiQiang; Stoffel, Kevin; Truco, Maria-Jose; Kozik, Alexander; Michelmore, Richard W; Van Deynze, Allen

    2013-01-01

    The widely cultivated pepper, Capsicum spp., important as a vegetable and spice crop world-wide, is one of the most diverse crops. To enhance breeding programs, a detailed characterization of Capsicum diversity including morphological, geographical and molecular data is required. Currently, molecular data characterizing Capsicum genetic diversity is limited. The development and application of high-throughput genome-wide markers in Capsicum will facilitate more detailed molecular characterization of germplasm collections, genetic relationships, and the generation of ultra-high density maps. We have developed the Pepper GeneChip® array from Affymetrix for polymorphism detection and expression analysis in Capsicum. Probes on the array were designed from 30,815 unigenes assembled from expressed sequence tags (ESTs). Our array design provides a maximum redundancy of 13 probes per base pair position allowing integration of multiple hybridization values per position to detect single position polymorphism (SPP). Hybridization of genomic DNA from 40 diverse C. annuum lines, used in breeding and research programs, and a representative from three additional cultivated species (C. frutescens, C. chinense and C. pubescens) detected 33,401 SPP markers within 13,323 unigenes. Among the C. annuum lines, 6,426 SPPs covering 3,818 unigenes were identified. An estimated three-fold reduction in diversity was detected in non-pungent compared with pungent lines, however, we were able to detect 251 highly informative markers across these C. annuum lines. In addition, an 8.7 cM region without polymorphism was detected around Pun1 in non-pungent C. annuum. An analysis of genetic relatedness and diversity using the software Structure revealed clustering of the germplasm which was confirmed with statistical support by principle components analysis (PCA) and phylogenetic analysis. This research demonstrates the effectiveness of parallel high-throughput discovery and application of genome

  15. The environment exerts a greater influence than the transgene on the transcriptome of field-grown wheat expressing the Pm3b allele.

    Science.gov (United States)

    Quijano, Carolina Diaz; Brunner, Susanne; Keller, Beat; Gruissem, Wilhelm; Sautter, Christof

    2015-02-01

    Wheat provides 20 % of the calories consumed worldwide. Powdery mildew infections of wheat can result in more than 30 % yield loss but it has been demonstrated that wheat overexpressing Pm3b, an allele of the R gene Pm3, has enhanced resistance against powdery mildew under field conditions. A gene expression profile study using GeneChip Wheat Genome Array and Fluidigm 96.96 Dynamic Arrays was performed to obtain insights into the mode of action of Pm3b and to elucidate the molecular basis of pleiotropic effects observed in three out of four independent transgenic events under field conditions. A cluster analysis of the microarray data and a principal component analysis of the Fluidigm 96.96 Dynamic Arrays data showed that transgenic lines and null segregants grouped together. The microarray analysis of samples from fungicide-treated plants revealed that significantly fewer genes were differentially expressed in Pm3b#1 than in Pm3b#2, which had a pleiotropic phenotype in the field, compared to their null segregants. Together, our data provide evidence that the environment influenced gene expression in the Pm3b lines more than the transgene itself. PMID:25095900

  16. Validation of pooled genotyping on the Affymetrix 500 k and SNP6.0 genotyping platforms using the polynomial-based probe-specific correction

    Directory of Open Access Journals (Sweden)

    Chew Fook Tim

    2009-12-01

    Full Text Available Abstract Background The use of pooled DNA on SNP microarrays (SNP-MaP has been shown to be a cost effective and rapid manner to perform whole-genome association evaluations. While the accuracy of SNP-MaP was extensively evaluated on the early Affymetrix 10 k and 100 k platforms, there have not been as many similarly comprehensive studies on more recent platforms. In the present study, we used the data generated from the full Affymetrix 500 k SNP set together with the polynomial-based probe-specific correction (PPC to derive allele frequency estimates. These estimates were compared to genotyping results of the same individuals on the same platform, as the basis to evaluate the reliability and accuracy of pooled genotyping on these high-throughput platforms. We subsequently extended this comparison to the new SNP6.0 platform capable of genotyping 1.8 million genetic variants. Results We showed that pooled genotyping on the 500 k platform performed as well as those previously shown on the relatively lower throughput 10 k and 100 k array sets, with high levels of accuracy (correlation coefficient: 0.988 and low median error (0.036 in allele frequency estimates. Similar results were also obtained from the SNP6.0 array set. A novel pooling strategy of overlapping sub-pools was attempted and comparison of estimated allele frequencies showed this strategy to be as reliable as replicate pools. The importance of an appropriate reference genotyping data set for the application of the PPC algorithm was also evaluated; reference samples with similar ethnic background to the pooled samples were found to improve estimation of allele frequencies. Conclusion We conclude that use of the PPC algorithm to estimate allele frequencies obtained from pooled genotyping on the high throughput 500 k and SNP6.0 platforms is highly accurate and reproducible especially when a suitable reference sample set is used to estimate the beta values for PPC.

  17. 21 CFR 137.190 - Cracked wheat.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Cracked wheat. 137.190 Section 137.190 Food and... Related Products § 137.190 Cracked wheat. Cracked wheat is the food prepared by so cracking or cutting into angular fragments cleaned wheat other than durum wheat and red durum wheat that, when tested...

  18. Wheat for Kids! [and] Teacher's Guide.

    Science.gov (United States)

    Idaho Wheat Commission, Boise.

    "Wheat for Kids" contains information at the elementary school level about: the structure of the wheat kernel; varieties of wheat and their uses; growing wheat; making wheat dough; the U.S. Department of Agriculture Food Guide Pyramid and nutrition; Idaho's part of the international wheat market; recipes; and word games based on the information…

  19. Wheat Production and Economics

    Directory of Open Access Journals (Sweden)

    Elgilany Ahmed

    2011-01-01

    Full Text Available Problem statement: The crop in the irrigated scheme has faced by manifold problems contributed to low level of productivity and high cost of production of wheat. The crop is commonly produced under pump irrigation from the River Nile. In River Nile State (RNS, wheat is grown under the irrigated sector, the State is considered as a suitable environment for producing this crop. The study was conducted at Elzeidab irrigated scheme of RNS which is regarded as the oldest and biggest scheme belonging to the Ministry of Agriculture of RNS. Approach: Primary data was collected by using structured questionnaire for (70 randomly selected respondents. More than one technique used to assess economic aspects of the crop. Cobb-Douglas production function, descriptive statistics and partial budgeting have been employed to analyze the primary data. The study detected that the major socioeconomic characteristics of Elzeidab farmers were educated, the scheme tenants have had a cumulative experience in agriculture and average farm size is found to be small and the majority 50% of surveyed tenants in Elzeidab scheme were rented. The farming system of Elzeidab scheme is dominated by wheat production which counts to 25% of the farm land. The yield gab with the potential yield obtained by Agricultural Research Corporation (ARC in the State amounts 66%. The microfinance market in Elzeidab scheme is not well developed. Water charges in the scheme were high. About 53% of the annual running expenses were allocated for fuel that made irrigation costs to be the highest single component of production costs of the crop, while irrigation water cost was considered as the most agricultural constraint, this item was found to be as 19% of the total cost of production as the highest percentage overall the variable cost items. Results: The regression analysis revealed that the most factors affecting wheat productivity under the study were: the average of tenants age, family labor

  20. PESTICIDES EFFICIENCY IN WHEAT PRODUCTION

    OpenAIRE

    Glinushkin, Aleksey

    2009-01-01

    It is suggested that the Karate Zeon insecticide is highly effective in wheat protection against pests. The profitability of soft spring wheat production with the above preparation used is about 176%. The economic effect of Karate Zeon is the same as that of Krezatsin, Mival and TMTD Plus preparations that are used for wheat seeds treatment against plant diseases

  1. Global transgenerational gene expression dynamics in two newly synthesized allohexaploid wheat (Triticum aestivum lines

    Directory of Open Access Journals (Sweden)

    Qi Bao

    2012-01-01

    Full Text Available Abstract Background Alteration in gene expression resulting from allopolyploidization is a prominent feature in plants, but its spectrum and extent are not fully known. Common wheat (Triticum aestivum was formed via allohexaploidization about 10,000 years ago, and became the most important crop plant. To gain further insights into the genome-wide transcriptional dynamics associated with the onset of common wheat formation, we conducted microarray-based genome-wide gene expression analysis on two newly synthesized allohexaploid wheat lines with chromosomal stability and a genome constitution analogous to that of the present-day common wheat. Results Multi-color GISH (genomic in situ hybridization was used to identify individual plants from two nascent allohexaploid wheat lines between Triticum turgidum (2n = 4x = 28; genome BBAA and Aegilops tauschii (2n = 2x = 14; genome DD, which had a stable chromosomal constitution analogous to that of common wheat (2n = 6x = 42; genome BBAADD. Genome-wide analysis of gene expression was performed for these allohexaploid lines along with their parental plants from T. turgidum and Ae. tauschii, using the Affymetrix Gene Chip Wheat Genome-Array. Comparison with the parental plants coupled with inclusion of empirical mid-parent values (MPVs revealed that whereas the great majority of genes showed the expected parental additivity, two major patterns of alteration in gene expression in the allohexaploid lines were identified: parental dominance expression and non-additive expression. Genes involved in each of the two altered expression patterns could be classified into three distinct groups, stochastic, heritable and persistent, based on their transgenerational heritability and inter-line conservation. Strikingly, whereas both altered patterns of gene expression showed a propensity of inheritance, identity of the involved genes was highly stochastic, consistent with the involvement of diverse Gene Ontology (GO

  2. Heat tolerance in wheat

    DEFF Research Database (Denmark)

    Sharma, Dew Kumari

    and quantitative genetics in particular, plant phenotyping based quantitative trait loci (QTL) discovery for a physiological trait under heat stress. Chlorophyll a fluorescence trait, Fv/Fm was used as a phenotyping tool, as it reflects the effect of heat stress on maximum photochemical efficiency of photosystem...... reveal how important these identified QTLs are in terms of improving heat tolerance in wheat. Similar approach of plant phenotyping based gene discovery can be used to understand other physiological traits in plants in response to different abiotic stresses, which may lead to identification of genes...... climate, wheat is sensitive to heat stress. We need to understand how our crops will perform in these changing climatic conditions and how we can develop varieties, which are more tolerant. The PhD study focussed on understanding heat tolerance in wheat with a combined approach of plant physiology...

  3. Growth factors in multiple myeloma: a comprehensive analysis of their expression in tumor cells and bone marrow environment using Affymetrix microarrays

    Directory of Open Access Journals (Sweden)

    Meißner Tobias

    2010-05-01

    Full Text Available Abstract Background Multiple myeloma (MM is characterized by a strong dependence of the tumor cells on their microenvironment, which produces growth factors supporting survival and proliferation of myeloma cells (MMC. In the past few years, many myeloma growth factors (MGF have been described in the literature. However, their relative importance and the nature of the cells producing MGF remain unidentified for many of them. Methods We have analysed the expression of 51 MGF and 36 MGF receptors (MGFR using Affymetrix microarrays throughout normal plasma cell differentiation, in MMC and in cells from the bone marrow (BM microenvironment (CD14, CD3, polymorphonuclear neutrophils, stromal cells and osteoclasts. Results 4/51 MGF and 9/36 MGF-receptors genes were significantly overexpressed in plasmablasts (PPC and BM plasma cell (BMPC compared to B cells whereas 11 MGF and 11 MGFR genes were overexpressed in BMPC compared to PPC. 3 MGF genes (AREG, NRG3, Wnt5A and none of the receptors were significantly overexpressed in MMC versus BMPC. Furthermore, 3/51 MGF genes were overexpressed in MMC compared to the the BM microenvironment whereas 22/51 MGF genes were overexpressed in one environment subpopulation compared to MMC. Conclusions Two major messages arise from this analysis 1 The majority of MGF genes is expressed by the bone marrow environment. 2 Several MGF and their receptors are overexpressed throughout normal plasma cell differentiation. This study provides an extensive and comparative analysis of MGF expression in plasma cell differentiation and in MM and gives new insights in the understanding of intercellular communication signals in MM.

  4. Growth factors in multiple myeloma: a comprehensive analysis of their expression in tumor cells and bone marrow environment using Affymetrix microarrays

    International Nuclear Information System (INIS)

    Multiple myeloma (MM) is characterized by a strong dependence of the tumor cells on their microenvironment, which produces growth factors supporting survival and proliferation of myeloma cells (MMC). In the past few years, many myeloma growth factors (MGF) have been described in the literature. However, their relative importance and the nature of the cells producing MGF remain unidentified for many of them. We have analysed the expression of 51 MGF and 36 MGF receptors (MGFR) using Affymetrix microarrays throughout normal plasma cell differentiation, in MMC and in cells from the bone marrow (BM) microenvironment (CD14, CD3, polymorphonuclear neutrophils, stromal cells and osteoclasts). 4/51 MGF and 9/36 MGF-receptors genes were significantly overexpressed in plasmablasts (PPC) and BM plasma cell (BMPC) compared to B cells whereas 11 MGF and 11 MGFR genes were overexpressed in BMPC compared to PPC. 3 MGF genes (AREG, NRG3, Wnt5A) and none of the receptors were significantly overexpressed in MMC versus BMPC. Furthermore, 3/51 MGF genes were overexpressed in MMC compared to the the BM microenvironment whereas 22/51 MGF genes were overexpressed in one environment subpopulation compared to MMC. Two major messages arise from this analysis 1) The majority of MGF genes is expressed by the bone marrow environment. 2) Several MGF and their receptors are overexpressed throughout normal plasma cell differentiation. This study provides an extensive and comparative analysis of MGF expression in plasma cell differentiation and in MM and gives new insights in the understanding of intercellular communication signals in MM

  5. A diploid wheat TILLING resource for wheat functional genomics

    Directory of Open Access Journals (Sweden)

    Rawat Nidhi

    2012-11-01

    Full Text Available Abstract Background Triticum monococcum L., an A genome diploid einkorn wheat, was the first domesticated crop. As a diploid, it is attractive genetic model for the study of gene structure and function of wheat-specific traits. Diploid wheat is currently not amenable to reverse genetics approaches such as insertion mutagenesis and post-transcriptional gene silencing strategies. However, TILLING offers a powerful functional genetics approach for wheat gene analysis. Results We developed a TILLING population of 1,532 M2 families using EMS as a mutagen. A total of 67 mutants were obtained for the four genes studied. Waxy gene mutation frequencies are known to be 1/17.6 - 34.4 kb DNA in polyploid wheat TILLING populations. The T. monococcum diploid wheat TILLING population had a mutation frequency of 1/90 kb for the same gene. Lignin biosynthesis pathway genes- COMT1, HCT2, and 4CL1 had mutation frequencies of 1/86 kb, 1/92 kb and 1/100 kb, respectively. The overall mutation frequency of the diploid wheat TILLING population was 1/92 kb. Conclusion The mutation frequency of a diploid wheat TILLING population was found to be higher than that reported for other diploid grasses. The rate, however, is lower than tetraploid and hexaploid wheat TILLING populations because of the higher tolerance of polyploids to mutations. Unlike polyploid wheat, most mutants in diploid wheat have a phenotype amenable to forward and reverse genetic analysis and establish diploid wheat as an attractive model to study gene function in wheat. We estimate that a TILLING population of 5, 520 will be needed to get a non-sense mutation for every wheat gene of interest with 95% probability.

  6. Registration of 'Chesapeake' Wheat

    Science.gov (United States)

    ‘Chesapeake’ (Reg. No. CV-1011, PI 643935) is a soft red winter wheat (Triticum aestivum L.) that was jointly developed and released by the Maryland Agricultural Experiment Station, Department of Plant Science and Landscape Architecture, and the Virginia Agricultural Experiment Station in 2005. Ches...

  7. Wheat - Aegilops introgressions

    Science.gov (United States)

    Aegilops is the most closely related genus to Triticum in the tribe Triticeae. Aegilops speltoides Tausch (B genome donor) and Ae. tauschii Coss. (D genome donor) contributed two of the three genomes present in common wheat (Triticum aestivum L., 2n = 6x = 42, AABBDD genomes). The Aegilops genus c...

  8. Delineating the structural, functional and evolutionary relationships of sucrose phosphate synthase gene family II in wheat and related grasses

    Directory of Open Access Journals (Sweden)

    Khalil Zaynali

    2010-06-01

    Full Text Available Abstract Background Sucrose phosphate synthase (SPS is an important component of the plant sucrose biosynthesis pathway. In the monocotyledonous Poaceae, five SPS genes have been identified. Here we present a detailed analysis of the wheat SPSII family in wheat. A set of homoeologue-specific primers was developed in order to permit both the detection of sequence variation, and the dissection of the individual contribution of each homoeologue to the global expression of SPSII. Results The expression in bread wheat over the course of development of various sucrose biosynthesis genes monitored on an Affymetrix array showed that the SPS genes were regulated over time and space. SPSII homoeologue-specific assays were used to show that the three homoeologues contributed differentially to the global expression of SPSII. Genetic mapping placed the set of homoeoloci on the short arms of the homoeologous group 3 chromosomes. A resequencing of the A and B genome copies allowed the detection of four haplotypes at each locus. The 3B copy includes an unspliced intron. A comparison of the sequences of the wheat SPSII orthologues present in the diploid progenitors einkorn, goatgrass and Triticum speltoides, as well as in the more distantly related species barley, rice, sorghum and purple false brome demonstrated that intronic sequence was less well conserved than exonic. Comparative sequence and phylogenetic analysis of SPSII gene showed that false purple brome was more similar to Triticeae than to rice. Wheat - rice synteny was found to be perturbed at the SPS region. Conclusion The homoeologue-specific assays will be suitable to derive associations between SPS functionality and key phenotypic traits. The amplicon sequences derived from the homoeologue-specific primers are informative regarding the evolution of SPSII in a polyploid context.

  9. Genome-Wide analysis of allelic imbalance in laser microdissected prostate cancer tissue using the Affymetrix 50K Mapping array identifies genomic patterns associated with metastasis and differentiation

    DEFF Research Database (Denmark)

    Tørring, Niels; Borre, Michael; Sørensen, Karina;

    2007-01-01

    to be developed for patient stratification based on risk of progression. We analysed laser-microdissected prostate tumour tissue from 43 patients with histologically verified PCa, using the new high-resolution Affymetrix Mapping 50K single-nucleotide polymorphism array. The results showed six major loss......, tumour progression towards a metastatic stage, as well as poor differentiation, was identified by specific patterns of copy number gains of genomic regions located at chromosomes 8q, 1q, 3q and 7q. Androgen ablation therapy was further characterised by copy gain at chromosomes 2p and 10q. In conclusion...

  10. wDBTF: an integrated database resource for studying wheat transcription factor families

    Directory of Open Access Journals (Sweden)

    Ravel Catherine

    2010-03-01

    Full Text Available Abstract Background Transcription factors (TFs regulate gene expression by interacting with promoters of their target genes and are classified into families based on their DNA-binding domains. Genes coding for TFs have been identified in the sequences of model plant genomes. The rice (Oryza sativa spp. japonica genome contains 2,384 TF gene models, which represent the mRNA transcript of a locus, classed into 63 families. Results We have created an extensive list of wheat (Triticum aestivum L TF sequences based on sequence homology with rice TFs identified and classified in the Database of Rice Transcription Factors (DRTF. We have identified 7,112 wheat sequences (contigs and singletons from a dataset of 1,033,960 expressed sequence tag and mRNA (ET sequences available. This number is about three times the number of TFs in rice so proportionally is very similar if allowance is made for the hexaploidy of wheat. Of these sequences 3,820 encode gene products with a DNA-binding domain and thus were confirmed as potential regulators. These 3,820 sequences were classified into 40 families and 84 subfamilies and some members defined orphan families. The results were compiled in the Database of Wheat Transcription Factor (wDBTF, an inventory available on the web http://wwwappli.nantes.inra.fr:8180/wDBFT/. For each accession, a link to its library source and its Affymetrix identification number is provided. The positions of Pfam (protein family database motifs were given when known. Conclusions wDBTF collates 3,820 wheat TF sequences validated by the presence of a DNA-binding domain out of 7,112 potential TF sequences identified from publicly available gene expression data. We also incorporated in silico expression data on these TFs into the database. Thus this database provides a major resource for systematic studies of TF families and their expression in wheat as illustrated here in a study of DOF family members expressed during seed development.

  11. Wheat Production and Wheat Rust Management in Canada

    Institute of Scientific and Technical Information of China (English)

    Xue Allen G; Chi Dawn T; Zhang Shu-zhen; Li Zuo-fu

    2012-01-01

    Wheat is Canada's the largest crop with most of the production in the western Canadian Prairie Provinces of Manitoba, Saskatchewan and Alberta. There were approximately 10 million (M) hectares (hm2) seeded to wheat in Canada, including 7 M hm2 of hexaploid spring wheat (Triticum aestivum L.), 2 M hm2 of durum wheat (T. turgidum L. ssp. durum (Desf.) Husn.), and 1 M hm2 of winter wheat (T. aestivum). Within hexaploid wheat there has been diversification into a number of market classes based on different end-use quality criteria. The predominant spring bread wheat class has been the Canada Western Red Spring (CWRS) class. Historically, the disease of major concern in wheat was stem rust, caused by Puccinia graminis f. sp. tritici. The first significant stem rust resistant cultivar in Canada was Thatcher, grown extensively from 1939 until the early 1970s. Thatcher, however, was very susceptible to leaf rust, caused by Puccinia triticina. Over years, improved resistance to both stem and leaf rust was achieved with the release of cultivars with additional genes for resistance, primarily Sr2, Sr6, Sr7a, Sr9b, Lr13, Lr14a, Lr16, and Lr34. The genetic resistance has adequately controlled stem rust but leaf rust continues to cause significant loss, partially due to changes in the P. triticina population which reduced the effectiveness of resistance genes such as Lr13 and Lr16. Stripe rust on wheat, caused by Puccinia striiformis f. sp. tritici, was historically a problem under irrigation in southern Alberta, but since 2000, it has been found annually in the central Canadian prairies and southern Ontario. The genetic basis of resistance to stripe rust in most Canadian wheat cultivars has not been determined, although Yr18 provides partial resistance in many cultivars. In the future, other rust diseases, such as wheat stripe rust, or highly virulent new pathotypes of current rust pathogens, such as P. graminis f. sp. tritici race Ug-99, may pose

  12. Wheat ferritins: Improving the iron content of the wheat grain

    DEFF Research Database (Denmark)

    Borg, Søren; Brinch-Pedersen, Henrik; Tauris, Birgitte;

    2012-01-01

    The characterization of the full complement of wheat ferritins show that the modern hexaploid wheat genome contains two ferritin genes, TaFer1 and TaFer2, each represented by three homeoalleles and placed on chromosome 5 and 4, respectively. The two genes are differentially regulated and expressed...... functional different and acting in heteropolymer structures of ferritin in cereals. Iron biofortification of the wheat grain is possible. Endosperm targeted intragenic overexpressing of the TaFer1-A gene results in a 50-85 % higher iron content in the grain....

  13. Drought Tolerance in Wheat

    Directory of Open Access Journals (Sweden)

    Arash Nezhadahmadi

    2013-01-01

    Full Text Available Drought is one of the most important phenomena which limit crops’ production and yield. Crops demonstrate various morphological, physiological, biochemical, and molecular responses to tackle drought stress. Plants’ vegetative and reproductive stages are intensively influenced by drought stress. Drought tolerance is a complicated trait which is controlled by polygenes and their expressions are influenced by various environmental elements. This means that breeding for this trait is so difficult and new molecular methods such as molecular markers, quantitative trait loci (QTL mapping strategies, and expression patterns of genes should be applied to produce drought tolerant genotypes. In wheat, there are several genes which are responsible for drought stress tolerance and produce different types of enzymes and proteins for instance, late embryogenesis abundant (lea, responsive to abscisic acid (Rab, rubisco, helicase, proline, glutathione-S-transferase (GST, and carbohydrates during drought stress. This review paper has concentrated on the study of water limitation and its effects on morphological, physiological, biochemical, and molecular responses of wheat with the possible losses caused by drought stress.

  14. International Competitiveness in Wheat Production

    OpenAIRE

    Andersen, Jay C.; Condie, Frank A.

    1989-01-01

    The future competitiveness of U.S. wheat producers who have exported more than half their crop in recent years was analyzed. Trends in production and trade, and enterprise accounts and budgeting were used to assess the comparative costs of various competing U.S. and foreign producers. The future success of U.S. wheat producers is dependent on their own efficiency, government agricultural programs, weather, and many factors pertaining to general government policies. Relative currency values, s...

  15. WHEAT GRASS HEALTH BENEFITS

    Directory of Open Access Journals (Sweden)

    Akula Annapurna

    2013-10-01

    Full Text Available Nutraceutical is a food or food product that provides health and medical benefits, including the preventionand treatment of disease. Nutraceuticals are the products typically claim to prevent chronic diseases, improve health,delay the aging process, and increase life expectancy.Let us know something about one such nutraceutical.Wheatgrass is a commonly found herb in India contains enzymes like protease, cytrochrome, amylase, lipase,transhydrogenase and SOD (super oxide dismutase. Besides these enzymes, it also contains all the essential aminoacids especially alanine, asparatic acid, glutamic acid, arginine and serine, which are helpful in providing good amountof protein in body which builds and repair tissues. Wheatgrass contains chlorophyll and flavonoids in good amount.It also contains vitamins like vitamin A, vitamin C, and vitamin E and minerals like iron, calcium and magnesium.Chlorophyll has been shown to build red blood cells quickly,cures anemia, normalise blood pressure by dilating theblood vessels. Chlorophyll has been shown to produce an unfavourable environment for bacterial growth in the bodyand therefore effective in increasing the body's resistance to illness. Probably the most important benefit ofwheatgrass is, it is a cancer fighting agent. Many people strongly believe that the benefits of wheatgrass on cancerare real and that consuming wheat grass can help in the treatment and even in the prevention of cancer. Wheatgrassproduces an immunization effect against many dietary carcinogens..Additional benefits of wheatgrass are bettercomplexion and a healthy glow. The slowing of graying hair is also a benefit believed to come from wheatgrass. Wecan grow wheat grass in small cups, pots and trays very conveniently in our homes, so that we will have fresh juiceand powder with minimum cost.

  16. Cadmium minimization in wheat: A critical review.

    Science.gov (United States)

    Rizwan, Muhammad; Ali, Shafaqat; Abbas, Tahir; Zia-Ur-Rehman, Muhammad; Hannan, Fakhir; Keller, Catherine; Al-Wabel, Mohammad I; Ok, Yong Sik

    2016-08-01

    Cadmium (Cd) accumulation in wheat (Triticum aestivum L.) and its subsequent transfer to food chain is a major environmental issue worldwide. Understanding wheat response to Cd stress and its management for aiming to reduce Cd uptake and accumulation in wheat may help to improve wheat growth and grain quality. This paper reviewed the toxic effects, tolerance mechanisms, and management of Cd stress in wheat. It was concluded that Cd decreased germination, growth, mineral nutrients, photosynthesis and grain yield of wheat and plant response to Cd toxicity varies with cultivars, growth conditions and duration of stress applied. Cadmium caused oxidative stress and genotoxicity in wheat plants. Stimulation of antioxidant defense system, osmoregulation, ion homeostasis and over production of signalling molecules are important adaptive strategies of wheat under Cd stress. Exogenous application of plant growth regulators, inorganic amendments, proper fertilization, silicon, and organic, manures and biochar, amendments are commonly used for the reduction of Cd uptake in wheat. Selection of low Cd-accumulating wheat cultivars, crop rotation, soil type, and exogenous application of microbes are among the other agronomic practices successfully employed in reducing Cd uptake by wheat. These management practices could enhance wheat tolerance to Cd stress and reduce the transfer of Cd to the food chain. However, their long-term sustainability in reducing Cd uptake by wheat needs further assessment.

  17. Cadmium minimization in wheat: A critical review.

    Science.gov (United States)

    Rizwan, Muhammad; Ali, Shafaqat; Abbas, Tahir; Zia-Ur-Rehman, Muhammad; Hannan, Fakhir; Keller, Catherine; Al-Wabel, Mohammad I; Ok, Yong Sik

    2016-08-01

    Cadmium (Cd) accumulation in wheat (Triticum aestivum L.) and its subsequent transfer to food chain is a major environmental issue worldwide. Understanding wheat response to Cd stress and its management for aiming to reduce Cd uptake and accumulation in wheat may help to improve wheat growth and grain quality. This paper reviewed the toxic effects, tolerance mechanisms, and management of Cd stress in wheat. It was concluded that Cd decreased germination, growth, mineral nutrients, photosynthesis and grain yield of wheat and plant response to Cd toxicity varies with cultivars, growth conditions and duration of stress applied. Cadmium caused oxidative stress and genotoxicity in wheat plants. Stimulation of antioxidant defense system, osmoregulation, ion homeostasis and over production of signalling molecules are important adaptive strategies of wheat under Cd stress. Exogenous application of plant growth regulators, inorganic amendments, proper fertilization, silicon, and organic, manures and biochar, amendments are commonly used for the reduction of Cd uptake in wheat. Selection of low Cd-accumulating wheat cultivars, crop rotation, soil type, and exogenous application of microbes are among the other agronomic practices successfully employed in reducing Cd uptake by wheat. These management practices could enhance wheat tolerance to Cd stress and reduce the transfer of Cd to the food chain. However, their long-term sustainability in reducing Cd uptake by wheat needs further assessment. PMID:27062345

  18. Oxylipins discriminate between whole grain wheat and wheat aleurone intake: a metabolomics study on pig plasma

    DEFF Research Database (Denmark)

    Nørskov, Natalja; Hedemann, Mette Skou; Theil, Peter Kappel;

    2013-01-01

    A pig model was used to investigate the difference in metabolic response of plasma between whole grain wheat and wheat aleurone. Six pigs were fed in a cross-over design iso dietary fiber (DF) breads prepared from whole grain wheat and wheat aleurone and with a wash-out diet based on bread produced...

  19. Overexpression of TaNAC69 Leads to Enhanced Transcript Levels of Stress Up-Regulated Genes and Dehydration Tolerance in Bread Wheat

    Institute of Scientific and Technical Information of China (English)

    Gang-Ping Xue; Heather M. Way; Terese Richardson; Janneke Drenth; Priya A. Joyce; C.Lynne Mclntyre

    2011-01-01

    NAC proteins are plant-specific transcription factors and enriched with members involved in plant response to drought stress. In this study, we analyzed the expression profiles of TaNAC69 in bread wheat using Affymetrix Wheat Genome Array datasets and quantitative RT-PCR. TaNAC69 expression was positively associated with wheat responses to both abiotic and biotic stresses and was closely correlated with a number of stress up-regulated genes. The functional analyses of TaNAC69 in transgenic wheat showed that TaNAC69 driven by a barley drought-inducible HvDhn4s promoter led to marked drought-inducible overexpression of TaNAC69 in the leaves and roots of transgenic lines. The HvDhn4s:Ta-NAC69 transgenic lines produced more shoot biomass under combined mild salt stress and water-limitation conditions,had longer root and more root biomass under polyethylene glycol-induced dehydration. Analysis of transgenic lines with constitutive overexpression of TaNAC69 showed the enhanced expression levels of several stress up-regulated genes.DNA-binding assays revealed that TaNAC69 and its rice homolog (ONAC131)were capable of binding to the promoter elements of three rice genes (chitinase, ZIM, and glyoxalase I)and an Arabidopsis glyoxalase I family gene, which are homologs of TaNAC69 up-regulated stress genes. These data suggest that TaNAC69 is involved in regulating stress up-regulated genes and wheat adaptation to drought stress.

  20. A genetic linkage map with 178 SSR and 1 901 SNP markers constructed using a RIL population in wheat (Triticum aestivum L.)

    Institute of Scientific and Technical Information of China (English)

    ZHAI Hui-jie; FENG Zhi-yu; LIU Xin-ye; CHENG Xue-jiao; PENG Hui-ru; YAO Ying-yin; SUN Qi-xin; NI Zhong-fu

    2015-01-01

    The construction of high density genetic linkage map provides a powerful tool to detect and map quantitative trait loci (QTLs) controlling agronomically important traits. In this study, simple sequence repeat (SSR) markers and Illumina 9K iSelect single nucleotide polymorphism (SNP) genechip were employed to construct one genetic linkage map of common wheat (Triticum aestivum L.) using 191 recombinant inbred lines (RILs) derived from cross Yu 8679xJing 411. This map included 1 901 SNP loci and 178 SSR loci, covering 1 659.9 cM and 1 000 marker bins, with an average interval distance of 1.66 cM. A, B and D genomes covered 719.1,703.5 and 237.3 cM, with an average interval distance of 1.66, 1.45 and 2.9 cM, respectively. Notably, the genetic linkage map covered 20 chromosomes, with the exception of chromosome 5D. Bioinformatics analysis revealed that 1 754 (92.27%) of 1 901 mapped SNP loci could be aligned to 1 215 distinct wheat unigenes, among which 1 184 (97.4%) were located on one single chromosome, and the rest 31 (2.6%) were located on 2 to 3 chromosomes. By performing in silico comparison, 214 chromosome deletion bin-mapped expressed sequence tags (ESTs), 1 043 Brachypodium genes and 1 033 rice genes were further added onto the genetic linkage map. This map not only integrated genetic and physical maps, SSR and SNP loci, respectively, but also provided the information of Brachypodium and rice genes corresponding to 1 754 SNP loci. Therefore, it will be a useful tool for comparative genomics analysis, fine mapping of QTL/gene controlling agronomically important traits and marker-assisted selection breeding in wheat.

  1. A genetic linkage map with 178 SSR and 1 901 SNP markers constructed using a RIL population in wheat (Triticum aestivum L.)

    Institute of Scientific and Technical Information of China (English)

    ZHAI Hui-jie; FENG Zhi-yu; LIU Xin-ye; CHENG Xue-jiao; PENG Hui-ru; YAO Ying-yin; SUN Qi-xin; NI Zhong-fu

    2015-01-01

    The construction of high density genetic linkage map provides a powerful tool to detect and map quantitative trait loci (QTLs) control ing agronomical y important traits. In this study, simple sequence repeat (SSR) markers and Il umina 9K iSelect single nucleotide polymorphism (SNP) genechip were employed to construct one genetic linkage map of common wheat (Triticum aestivum L.) using 191 recombinant inbred lines (RILs) derived from cross Yu 8679×Jing 411. This map included 1 901 SNP loci and 178 SSR loci, covering 1 659.9 cM and 1 000 marker bins, with an average interval distance of 1.66 cM. A, B and D genomes covered 719.1, 703.5 and 237.3 cM, with an average interval distance of 1.66, 1.45 and 2.9 cM, respectively. Notably, the genetic linkage map covered 20 chromosomes, with the exception of chromosome 5D. Bioinformatics analysis revealed that 1 754 (92.27%) of 1 901 mapped SNP loci could be aligned to 1 215 distinct wheat unigenes, among which 1 184 (97.4%) were located on one single chromosome, and the rest 31 (2.6%) were located on 2 to 3 chromosomes. By performing in silico comparison, 214 chromosome deletion bin-mapped expressed sequence tags (ESTs), 1 043 Brachypodium genes and 1 033 rice genes were further added onto the genetic linkage map. This map not only integrated genetic and physical maps, SSR and SNP loci, respectively, but also provided the information of Brachypodium and rice genes corresponding to 1 754 SNP loci. Therefore, it wil be a useful tool for comparative genomics analysis, ifne mapping of QTL/gene control ing agronomical y important traits and marker-assisted selection breeding in wheat.

  2. Growing Wheat. People on the Farm.

    Science.gov (United States)

    Department of Agriculture, Washington, DC. Office of Governmental and Public Affairs.

    This booklet, one in a series about life on modern farms, describes the daily life of the Don Riffel family, wheat farmers in Kansas. Beginning with early morning, the booklet traces the family's activities through a typical harvesting day in July, while explaining how a wheat farm is run. The booklet also briefly describes the wheat growing…

  3. Durum wheat quality prediction in Mediterranean environments

    DEFF Research Database (Denmark)

    Toscano, P.; Gioli, B.; Genesio, L.;

    2014-01-01

    Durum wheat is one of the most important agricultural crops in the Mediterranean area. In addition to yield, grain quality is very important in wheat markets because of the demand for high-quality end products such as pasta, couscous and bulgur wheat. Grain quality is directly affected by several...

  4. 21 CFR 184.1322 - Wheat gluten.

    Science.gov (United States)

    2010-04-01

    ... principal protein component of wheat and consists mainly of gliadin and glutenin. Wheat gluten is obtained... 21 Food and Drugs 3 2010-04-01 2009-04-01 true Wheat gluten. 184.1322 Section 184.1322 Food and Drugs FOOD AND DRUG ADMINISTRATION, DEPARTMENT OF HEALTH AND HUMAN SERVICES (CONTINUED) FOOD FOR...

  5. Dissecting the molecular basis of the contribution of source strength to high fructan accumulation in wheat.

    Science.gov (United States)

    Xue, Gang-Ping; Drenth, Janneke; Glassop, Donna; Kooiker, Maarten; McIntyre, C Lynne

    2013-01-01

    Fructans represent the major component of water soluble carbohydrates (WSCs) in the maturing stem of temperate cereals and are an important temporary carbon reserve for grain filling. To investigate the importance of source carbon availability in fructan accumulation and its molecular basis, we performed comparative analyses of WSC components and the expression profiles of genes involved in major carbohydrate metabolism and photosynthesis in the flag leaves of recombinant inbred lines from wheat cultivars Seri M82 and Babax (SB lines). High sucrose levels in the mature flag leaf (source organ) were found to be positively associated with WSC and fructan concentrations in both the leaf and stem of SB lines in several field trials. Analysis of Affymetrix expression array data revealed that high leaf sucrose lines grown in abiotic-stress-prone environments had high expression levels of a number of genes in the leaf involved in the sucrose synthetic pathway and photosynthesis, such as Calvin cycle genes, antioxidant genes involved in chloroplast H(2)O(2) removal and genes involved in energy dissipation. The expression of the majority of genes involved in fructan and starch synthetic pathways were positively correlated with sucrose levels in the leaves of SB lines. The high level of leaf fructans in high leaf sucrose lines is likely attributed to the elevated expression levels of fructan synthetic enzymes, as the mRNA levels of three fructosyltransferase families were consistently correlated with leaf sucrose levels among SB lines. These data suggest that high source strength is one of the important genetic factors determining high levels of WSC in wheat.

  6. Arabidopsis transcriptional responses differentiating closely related chemicals (herbicides) and cross-species extrapolation to Brassica

    Science.gov (United States)

    Using whole genome Affymetrix ATH1 GeneChips we characterized the transcriptional response of Arabidopsis thaliana Columbia 24 hours after treatment with five different herbicides. Four of them (chloransulam, imazapyr, primisulfuron, sulfometuron) inhibit acetolactate synthase (A...

  7. Identification methods for irradiated wheat

    International Nuclear Information System (INIS)

    The effect of irradiation on wheat seeds was examined using various kinds of analytical methods for the identification of irradiated seeds. In germination test, the growth of sprouts was markedly inhibited at 500Gy, which was not affected by storage. The decrease in germination percentage was detected at 3300Gy. The results of enzymatic activity change in the germ measured by Vita-Scope germinator showed that the seeds irradiated at 10kGy could be identified. The content of amino acids in ungerminated and germinated seeds were analyzed. Irradiation at 10kGy caused the decrease of lysine content but the change was small which need very careful operation to detect it. The chemiluminescence intensity increased with radiation dose and decreased during storage. The wheat irradiated at 10kGy could be identified even after 3 months storage. In the electron spin resonance (ESR) spectrum analysis, the signal intensity with the g value f 2.0055 of skinned wheat seeds increased with radiation dose. Among these methods, germination test was the most sensitive and effective for identification of irradiated wheat. (author)

  8. Registration of 'Red Ruby' Wheat

    Science.gov (United States)

    ‘Red Ruby’ soft red winter wheat (Triticum aestivum L.) was developed by the Michigan Agricultural Experiment Station and released in 2007 via an exclusive licensing agreement through Michigan State University (MSU) Technologies. Red Ruby was selected from the cross Pioneer ‘2552’/Pioneer ‘2737W’ ma...

  9. IPR 118 - Bread wheat cultivar

    Directory of Open Access Journals (Sweden)

    Carlos Roberto Riede

    2007-01-01

    Full Text Available Wheat cultivar IPR 118 developed by IAPAR has a good yield potential and is widely adapted. It is earlymaturing and moderately tolerant to shattering and soil aluminum, moderately resistant to leaf rust and presents high glutenstrength for bread-making. The overall yield exceeded controls by 13%.

  10. Transferring alien genes to wheat

    International Nuclear Information System (INIS)

    In broad terms an alien gene can be considered to be any gene transferred to wheat from a related species. As described above by Maan (section 7D) the genus Triticum contains a broad range of species, some of which cross readily with the cultivated tetraploid (T. Turgidum L.) or hexaploid (T. aestivum L.) wheats, and others only with great difficulty. In addition, wheat will also cross with species in a number of other genera including Agropyron, Elymus, Elytrigia (=Agropyron), Haynaldia, Hordeum, and Secale (Riley and Kimber, 1966; Knobloch, 1968; Feldman and Sears, 1981). In discussing the Triticum and Aegilops spp., the classification by Kimber and Sears, section SA-I, above, will be followed. For the Agropyron and related species the classification described by Dewey (1983) will be used. To avoid confusion, in referring to the literature the designations used by the authors will be given, followed by the new designation. The wild relatives of wheat are adapted to a broad range of environments and carry a large reservoir of useful genes (Zohary et al., 1969; Kerber and Dyck, 1973; Brezhnev, 1977; Feldman and Sears, 1981; Limin and Fowler, 1981; Sharma et aI., 1981; McGuire and Dvorak, 1981). Initially they were considered to be primarily sources of disease resistance, but more recently they have been recognized as potential sources of genes for high protein, cold tolerance, salt tolerance, drought tolerance, lodging resistance, early maturity, and even yield. Extensive screening of the wild relatives of wheat needs to be done before their useful genes can be fully utilized

  11. Segregation ratios of colored grains in F1 hybrid wheat

    OpenAIRE

    Zifeng Guo; Ping Xu; Zhengbin Zhang; Yunna Guo

    2012-01-01

    Nutritious and functional foods from wheat have received great attention in recent years. Colored-grain wheat contains a large number of nutrients such as anthocyanins and hence the breeding is interesting. In this work, colored-grained wheat lines of mixed pollination of einkorn wheat (Triticum boeoticum, AA) and French rye (French Secale cereale, RR) were used as male parents and wheat line Y1642 (derived from common wheat and Agropyron elongatum, AABBDD) was used as the female parent. Thes...

  12. Concept, Characteristics and Future of Cold-type Wheat

    Institute of Scientific and Technical Information of China (English)

    Zhang Songwu

    2007-01-01

    Cold types of wheat are the kinds of wheat whose canopy temperature keeps slightly lower and has a series of advantageous traits, which are favorable for wheat to have high and stable yield and stable high quality. The paper expatiates on the advances and important problems in the research of cold types of wheat and predicts the future of cold types of wheat and the influences of the research about cold types of wheat on other crops and plants.

  13. Evaluation and reselection of wheat resistance to Russian wheat aphid biotype 2

    Science.gov (United States)

    Russian wheat aphid (RWA, Diuraphis noxia, Mordvilko) biotype 2 (RWA2) is virulent to most known RWA resistance genes and severely threatens wheat production in the hard winter wheat area of the US western Great Plains. We determined RWA2 reactions of 386 cultivars from China, 227 advanced breeding...

  14. Effects of protein in wheat flour on retrogradation of wheat starch.

    Science.gov (United States)

    Xijun, Lian; Junjie, Guo; Danli, Wang; Lin, Li; Jiaran, Zhu

    2014-08-01

    Albumins, globulins, gliadins, and glutenins were isolated from wheat flour and the effects of those proteins on retrogradation of wheat starch were investigated. The results showed that only glutenins retarded retrogradation of wheat starch and other 3 proteins promoted it. The results of IR spectra proved that no S-S linkage formed during retrogradation of wheat starch blended with wheat proteins. Combination of wheat starch and globulins or gliadins through glucosidic bonds hindered the hydrolysis of wheat starch by α-amylase. The melting peak temperatures of retrograded wheat starch attached to different proteins were 128.46, 126.14, 132.03, 121.65, and 134.84 °C for the control with no protein, albumins, glutenins, globulins, gliadins groups, respectively, and there was no second melting temperature for albumins group. Interaction of wheat proteins and starch in retrograded wheat starch greatly decreased the endothermic enthalpy (△H) of retrograded wheat starch. Retrograded wheat starch bound to gliadins might be a new kind of resistant starch based on glycosidic bond between starch and protein.

  15. Prehaustorial and posthaustorial resistance to wheat leaf rust in diploid wheat

    NARCIS (Netherlands)

    Anker, C.C.

    2001-01-01

    In modern wheat cultivars, resistance to wheat leaf rust, Puccinia triticina , is either based on hypersensitivity resistance or on partial resistance. Hypersensitivity resistance in wheat is monogenic, often complete and posthaustorial: it is induced after the formation of a haustorium by the patho

  16. BIOPULPING OF WHEAT STRAW WITH PHANEROCHAETE CHRYSOSPORIUM

    Institute of Scientific and Technical Information of China (English)

    Hong Yu; Menghua Qin; Xuemei Lu; Yinbo Qu; Peiji Gao

    2004-01-01

    Wheat straw was cut into a certain size range and treated with a strain of the white rot fungus Phanerochatete Chrysosporium for 5 days before subjected to a chemi-mechanical treatment. Chemical analyses revealed the effects of the white rot fungus on the wheat straw components. SEM was applied to observe the changes in fiber micromorphological structures. CODcr of the effluent from the sulfonation treatment of wheat straw was also discussed. Handsheets made from the treated and untreated wheat straw exhibited different optical and physical properties after chemi-mechanical pulping.

  17. BIOPULPING OF WHEAT STRAW WITH PHANEROCHAETE CHRYSOSPORIUM

    Institute of Scientific and Technical Information of China (English)

    HongYu; MenghuaQin; XuemeiLu; YinboQu; PeijiGao

    2004-01-01

    Wheat straw was cut into a certain size range and treated with a strain of the white rot fungus Phaneroehatete Chrysosporium for 5 days before subjected to a chemi-mechanical treatment. Chemical analyses revealed the effects of the white rot fungus on the wheat straw components. SEM was applied to observe the changes in fiber micromorphological structures. CODcr of the effluent from the sulfonation treatment of wheat straw was also discussed. Handsheets made from the treated anduntreated wheat straw exhibited different optical and physical properties after chemi-mechanical pulping.

  18. Aroma of Wheat Bread Crumb

    DEFF Research Database (Denmark)

    Birch, Anja Niehues

    Understanding how the dough fermentation conditions influence the wheat bread production time and the bread aroma is important for the bread industry. The overall purpose of this PhD project is to investigate the effects of commercial baker’s yeast (level and type) and fermentation temperature...... on dough expansion and aroma in bread crumb. In Paper I the effects of commercial baker’s yeast (level and type) and fermentation temperature on dough expansion were investigated. Wheat doughs were fermented by seven commercial baker’s yeasts (baker’s yeast I to VII) at different yeast concentrations (2....... The highest kinetic rate constants corresponding to the shortest fermentation times were found for doughs fermented at 25°C and the highest yeast concentration. Doughs fermented with commercial baker’s yeast I, II, III and V had shorter fermentation times compared to fermentation with baker’s yeast IV, VI...

  19. Organic winter wheat: optimising planting

    OpenAIRE

    Haigh, Z. E. L.; Baddeley, J. A.; Boyd, H. E.; Clarke, S.; Jones, H; Rees, R. M.; Wolfe, M S

    2008-01-01

    Data from the second year of experiments at three sites (Wakelyns in SE and Sheepdrove in SW England; and Chapel Farm in SE Scotland) to investigate the effects of interactions among a range of agronomic practices (row spacing, seed density, weeding and undersowing with clover) on winter wheat performance are presented, and compared with first year results. Trends seen at all years and sites indicate that narrow row drill arrangements with high seed rates result in the highest yields. This co...

  20. Winter wheat and summer shade

    Science.gov (United States)

    Artru, S.; Garre, S.; Lassois, L.; Dupraz, C.

    2014-12-01

    Agroforestry research is in full expansion, but uncertainty remains on the performance of combinations of species with regard to the broad range of possible species associations. In addition, the variability of environmental conditions under which agroforestry stands can be successfully developed is unknown. Under Belgian pedoclimatic conditions, tree-crop competition for light might be the principal limiting factor in the agroforestry context. Most studies show that shade stress induces a systematic reduction of final crop yield. However, the response of a specific crop to shade is highly dependent on environmental conditions. In agroforestry systems, the tree canopy reduces the incident radiation for the crop following a dynamic spatio-temporal pattern. In this study, we will report on the efficiency of wheat under artificial dynamic shade in the experimental farm of Gembloux Agro-Bio Tech, Belgium in order to evaluate it's potential for agroforestry purposes in the same region. Wheat productivity and development under artificial shade conditions have been monitored during 1 year and the observations will be continued for 2 more years. We constructed an artificial shade structure, which mimics the light environment observed under hybrid walnut agroforestry trees: periodic fluctuation in radiation transmittance and discontinuous light quantity. We collected information on biomass development, soil state and radiation patterns in the field. Using this data, we evaluated the influence of dynamic shade, light availability and the efficiency with which energy is converted in wheat dry matter under the artificial shade treatment. This, in combination with modeling, will allow a thorough study of the potential of wheat-walnut agroforestry systems in the Hesbaye region in Belgium.

  1. Using Transcriptomics to Understand the Wheat Genome

    Science.gov (United States)

    Wheat (Triticum aestivum L.) is one of the most important food crops in the world, and transcriptomics studies of this crop promise to reveal the expression dynamics of genes that control many agriculturally important traits. In this review of wheat transcriptomics research, the current status of tr...

  2. Registration of ‘Yellowstone’ wheat

    Science.gov (United States)

    'Yellowstone' hard red winter wheat (Triticum aestivum L.) was developed by the Montana Agricultural Experiment Station and released in September 2005. Yellowstone was released for its high yield potential and broad adaptation to Montana winter wheat production environments. Yellowstone was named in...

  3. Price Responsiveness of Wheat Class Demands

    OpenAIRE

    Gallagher, Paul; Wilson, William W.; Riepe, Jean

    1988-01-01

    This paper identifies the price responsiveness and preferences for wheat classes using a "Case" Function specification. Results indicate there have been numerous changes in market shares of wheat classes from the different exporters in specific markets. In general, quality differentials are important in some international markets, whereas others are very price responsive.

  4. Agronomic Performance of Low Phytic Acid Wheat

    Science.gov (United States)

    Low phytic acid (LPA) genotypes of wheat are one approach to improving the nutritional quality of wheat by reducing the concentration of phytic acid in the aleurone layer, thus reducing the chelation of nutritionally important minerals and improving the bioavailability of phosphorus. Field studies ...

  5. 21 CFR 137.205 - Bromated whole wheat flour.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Bromated whole wheat flour. 137.205 Section 137... Cereal Flours and Related Products § 137.205 Bromated whole wheat flour. Bromated whole wheat flour... of ingredients, prescribed for whole wheat flour by § 137.200, except that potassium bromate is...

  6. 7 CFR 810.2201 - Definition of wheat.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 7 2010-01-01 2010-01-01 false Definition of wheat. 810.2201 Section 810.2201... GRAIN United States Standards for Wheat Terms Defined § 810.2201 Definition of wheat. Grain that, before the removal of dockage, consists of 50 percent or more common wheat (Triticum aestivum L.), club...

  7. Effects of Processing on Wheat Tortilla Quality: Benefits of Hard White Wheat

    Institute of Scientific and Technical Information of China (English)

    Michael Tilley; Valquiria Pierucci; Katherine A Tilley; Okkyung Kim Chung

    2006-01-01

    The suitability of Kansas hard white winter (HWW) wheat milled at a high extraction rate for tortilla production was investigated. All of the Kansas varieties of white wheat, milled to 80% extraction, performed as well as, if not better than, a standard commercial tortilla flour milled to 72% extraction when various quality factors were compared. Tortillas were made from eight wheat cultivars milled at 80% extraction: four HWW wheat cultivars included Betty, Heyne, Oro Blanco and NuWest; three hard red winter (HRW) wheat samples were Jagger and Ike grown at Hutchinson, Kansas (Ike-Hutch) and at Hays, Kansas (Ike-Hays); and one hard white spring (HWS) wheat cultivar, Idaho 377-S. Tortillas made from these flours were compared to tortillas made from one commercial tortilla-flour milled to 72% extraction from a blend of HRW wheat. Mixograph parameters, starch pasting properties,dough-handling characteristics and tortilla- making attributes of the new Kansas HWW wheat cultivars, Betty and Heyne, were superior. In summary, Kansas HWW wheat flours, milled to 80% extraction, produced tortillas which were equal to, or superior to,those made from 80%-extraction HRW wheat flours and 72%-extraction commercial tortilla flour.

  8. Induction of mutations in wheat

    International Nuclear Information System (INIS)

    Studies on toxicity of various mutagenic factors including gamma radiation, X-rays and fast neutrons and their optimal doses for valuble mutation breeding of bread winter, spring and durum wheat have been carried out. Data on sublethal doses of mutagens and chromosome aberration frequency for different doses of mutagens have been collected. It is observed that the greater general frequency of visible mutations by a mutagen does not ensure the greater relative yield of valuable mutations. In the course of the investigations, about 90 valuable mutant forms and mutant hybrids are selected for further breeding studies. (M.G.B.)

  9. Using multispectral imagery to compare the spatial pattern of injury to wheat caused by Russian wheat aphid and greenbug

    Science.gov (United States)

    The Russian wheat aphid, Diuraphis noxia (Mordvilko), and greenbug, Schizaphis graminum (Rondani), are important aphid pests of wheat. Outbreaks of both pests in commercial wheat fields occur almost every year in the Great Plains of the United States. Infestations of both pests in wheat fields are...

  10. DIFFERENTIATION AND IMPLICIT PRICES OF U.S. WHEAT EXPORTS

    OpenAIRE

    Uri, Noel D; Hyberg, Bengt

    1996-01-01

    This investigation looks at whether the grade determining and official criteria factors identified by the Federal Grain Inspection Service influence the price of wheat for export and, in turn, the competitiveness of United States wheat in the world market. Using data on the transactions price for hard red winter wheat, hard red spring wheat, and soft white wheat and the associated quality characteristics covering the period January 1990 through December 1991 and exported to 63 countries, the ...

  11. GRAIN QUALITY AND NORTH AMERICAN HARD WHEAT EXPORTS

    OpenAIRE

    Wilson, William W.; Dahl, Bruce L.

    1998-01-01

    Past debate on competition and quality in international wheat markets has focused on class and country of origin as the salient source of differentiation. This study analyzes changes in demand for both wheat classes and grades. Comparisons are made between Canadian and U.S. hard wheats, principal competitors in the hard wheat market. Both countries are dominant producers of Hard Red Spring Wheat (HRS in the United States and Canadian Western Red Spring [CWRS] in Canada); the United States is ...

  12. Wheat products as acceptable substitutes for rice.

    Science.gov (United States)

    Yu, B H; Kies, C

    1993-07-01

    The objective of the study was to compare the acceptability to semi-trained US American and Asian palatability panelist, of four wheat products processed to be possible replacers of rice in human diets. Products evaluated using rice as the control standard of excellence were steamed whole wheat, couscous (steamed, extracted wheat flour semolina), rosamarina (rice shaped, extracted wheat flour pasta), and bulgar (steamed, pre-cooked partly debranned, cracked wheat). Using a ten point hedonic rating scale, both groups of panelists gave rosamarina closely followed by couscous, most favorable ratings although these ratings were somewhat lower than that of the positive control, steamed polished rice. Bulgar wheat was given the lowest evaluation and was, in general, found to be an unacceptable replacement for rice by both American and Asian judges because of its dark, 'greasy' color and distinctive flavor. In their personal dietaries, judges included rice from 0.25 to 18 times per week with the Asian judges consuming rice significantly more times per week than did the American judges (10.8 +/- 4.71 vs 1.75 +/- 1.65, p < 0.01). However, rice consumption patterns, nationality, race, or sex of the judges was not demonstrated to affect scoring of the wheat products as rice replacers. PMID:8332588

  13. Micromilling enhances iron bioaccessibility from wholegrain wheat.

    Science.gov (United States)

    Latunde-Dada, G O; Li, X; Parodi, A; Edwards, C H; Ellis, P R; Sharp, P A

    2014-11-19

    Cereals constitute important sources of iron in human diet; however, much of the iron in wheat is lost during processing for the production of white flour. This study employed novel food processing techniques to increase the bioaccessibility of naturally occurring iron in wheat. Iron was localized in wheat by Perl's Prussian blue staining. Soluble iron from digested wheat flour was measured by a ferrozine spectrophotometric assay. Iron bioaccessibility was determined using an in vitro simulated peptic-pancreatic digestion, followed by measurement of ferritin (a surrogate marker for iron absorption) in Caco-2 cells. Light microscopy revealed that iron in wheat was encapsulated in cells of the aleurone layer and remained intact after in vivo digestion and passage through the gastrointestinal tract. The solubility of iron in wholegrain wheat and in purified wheat aleurone increased significantly after enzymatic digestion with Driselase, and following mechanical disruption using micromilling. Furthermore, following in vitro simulated peptic-pancreatic digestion, iron bioaccessibility, measured as ferritin formation in Caco-2 cells, from micromilled aleurone flour was significantly higher (52%) than from whole aleurone flour. Taken together our data show that disruption of aleurone cell walls could increase iron bioaccessibility. Micromilled aleurone could provide an alternative strategy for iron fortification of cereal products.

  14. Aroma of wheat porridge and bread-crumb is influenced by the wheat variety

    DEFF Research Database (Denmark)

    Starr, Gerrard; Hansen, Åse Solvej; Petersen, Mikael Agerlin;

    2015-01-01

    Sensory evaluations were conducted on wheat-flour porridge and baked-bread samples, made from wheat varieties with known odour and flavour variations. The purpose was to determine if these odour and flavour variations were expressed in baked-bread. In all, 24 wheat varieties were used for porridge...... evaluation, from these eight were selected for bread evaluation. Porridge and bread results were compared. Variations were found in both evaluations. Five odour- and nine flavour descriptors were found to be common to both wheat porridge and bread. The results for two descriptors: "cocoa" and "oat porridge......" were correlated between the wheat porridge and bread samples. Analysis of whole-meal and low-extraction samples revealed that the descriptors "malt", "oat-porridge", "øllebrød", "cocoa" and "grain" mostly characterized wheat bran, while descriptors for "maize", "bean-shoots", "chamomile", "umami...

  15. Influence of ionising radiation on macromolecular components of wheat; possible use in detecting irradiated wheat

    Energy Technology Data Exchange (ETDEWEB)

    Jabir, A.-W.Sh.

    1992-01-01

    The treatment of food by ionising radiation is already permitted by many governments and is under consideration by many others. Cereal are irradiated as a means of disinfestation, this study investigates the effects of such processing on the components of wheat and examines using such radiation induced changes to detect irradiation. Wheat has been irradiated with ionising radiation in the dose range up to 1 kGy. The rheological properties of doughs prepared from this irradiated wheat have been investigated. An immunological assay has been employed to investigate the effect of wheat irradiation on the integrity of gliadin. A method has been developed for the routine isolation of DNA from wheat. Radiation-induced disruption of the DNA double helix has been assessed in DNA extracted from irradiated wheat and calf thymus DNA irradiated in aqueous solution. (author).

  16. Exploiting mutagenesis for wheat improvement

    International Nuclear Information System (INIS)

    The chemical mutagen, ethylmethanesulphonate, is being used to introduce into wheat novel variation that can be exploited for crop improvement. We have created mutagenised populations of diploid (Einkorn), tetraploid (Durum) and hexaploid (bread) wheat. The forward genetic approach enables the identification of high yielding or novel phenotypes that can be exploited in conventional breeding programmes. A powerful reverse genetic strategy, TILLING (Targetting Induced Local Lesions IN Genomes), allows the detection of induced point mutations in the populations of mutagenised individuals and allows gene function to be examined. Genetic redundancy in the tetraploid and hexaploid species allows them to tolerate a high level of mutation (up to one mutation per 25kbp). This mutation frequency makes it relatively easy to identify lesions in each homeologue of a particular gene which can then be combined for crop improvement or functional genomics. Novel variation created can be exploited without the regulatory restrictions imposed on genetically modified organisms. Gene targets have been selected in relation to plant architecture, primary metabolism, disease resistance and stress tolerance and over 50 TILLING mutants have so been identified, including mis-sense, non-sense and splice site mutations (author)

  17. On the Parable of Weeds and Wheat

    Institute of Scientific and Technical Information of China (English)

    HUANG Wei

    2013-01-01

    This paper probes on one of the famous parables of Jesus-the Wheat and Weeds, and demonstrates some implied meaning and morals connoted in it. Through an interesting contrast between the calm restraint of the householder and high anxi-ety of his slaves, this parable suggests that people should stay calm and learn from God to be tolerate and lenient religiously to“let wheat and weeds grow together until the harvest”. Meanwhile, God drops a subtle hint to seed wheat positively in stead of sug-gesting people to remove weeds negatively.

  18. Wheat Bran Phenolic Acids: Bioavailability and Stability in Whole Wheat-Based Foods.

    Science.gov (United States)

    Laddomada, Barbara; Caretto, Sofia; Mita, Giovanni

    2015-08-28

    Wheat bran is generally considered a byproduct of the flour milling industry, but it is a great source of fibers, minerals, and antioxidants that are important for human health. Phenolic acids are a specific class of wheat bran components that may act as antioxidants to prevent heart disease and to lower the incidence of colon cancer. Moreover, phenolic acids have anti-inflammatory properties that are potentially significant for the promotion of gastrointestinal health. Evidence on the beneficial effects of phenolic acids as well as of other wheat bran components is encouraging the use of wheat bran as an ingredient of functional foods. After an overview of the chemistry, function, and bioavailability of wheat phenolic acids, the discussion will focus on how technologies can allow the formulation of new, functional whole wheat products with enhanced health-promoting value and safety without renouncing the good-tasting standards that are required by consumers. Finally, this review summarizes the latest studies about the stability of phenolic acids in wheat foods fortified by the addition of wheat bran, pearled fractions, or wheat bran extracts.

  19. Wheat Bran Phenolic Acids: Bioavailability and Stability in Whole Wheat-Based Foods

    Directory of Open Access Journals (Sweden)

    Barbara Laddomada

    2015-08-01

    Full Text Available Wheat bran is generally considered a byproduct of the flour milling industry, but it is a great source of fibers, minerals, and antioxidants that are important for human health. Phenolic acids are a specific class of wheat bran components that may act as antioxidants to prevent heart disease and to lower the incidence of colon cancer. Moreover, phenolic acids have anti-inflammatory properties that are potentially significant for the promotion of gastrointestinal health. Evidence on the beneficial effects of phenolic acids as well as of other wheat bran components is encouraging the use of wheat bran as an ingredient of functional foods. After an overview of the chemistry, function, and bioavailability of wheat phenolic acids, the discussion will focus on how technologies can allow the formulation of new, functional whole wheat products with enhanced health-promoting value and safety without renouncing the good-tasting standards that are required by consumers. Finally, this review summarizes the latest studies about the stability of phenolic acids in wheat foods fortified by the addition of wheat bran, pearled fractions, or wheat bran extracts.

  20. Chronic headaches and sleepiness caused by facial soap (containing hydrolyzed wheat proteins)-induced wheat allergy.

    Science.gov (United States)

    Iseki, Chifumi; Kawanami, Toru; Tsunoda, Takahiko; Chinuki, Yuko; Kato, Takeo

    2014-01-01

    A 38-year-old woman was suffering from irregular headaches and sleepiness. She had used soap containing Glupearl 19S (hydrolyzed wheat proteins) every day for approximately one year and had experienced an episode of rash eruption on her face seven months ago. Wheat-specific IgE antibodies were detected in her serum. A Western blot analysis revealed a high titer of IgE antibodies against Glupearl 19S and wheat proteins. The patient was sensitive to these compounds in a skin prick test. After avoiding eating wheat, her headaches and sleepiness disappeared. A hidden food allergy is a possible cause of these symptoms.

  1. Research and application of hybrid wheat in China

    Institute of Scientific and Technical Information of China (English)

    Zhao Changping

    2013-01-01

    Hybrid wheat is recognized as a preferred approach to improve wheat yield,and it will be a competi-tion focus in high-tech seed industry in the future. We have made a breakthrough for the first time in creation of two-line hybrid wheat system,which reaches the world leading level in wheat research and has laid an important foundation for the future direction of the world wheat research. Similar to hybrid rice,the innovation of two-line hybrid wheat system is another achievement in science and technology. The application of hybrid wheat in China will greatly increase the food production,and make a great significance to food production and food security. This paper introduces the development process and major breakthrough of hybrid wheat in China,and the main bottle-neck and countermeasures in the application of hybrid wheat.

  2. Segregation ratios of colored grains in F1 hybrid wheat

    Directory of Open Access Journals (Sweden)

    Zifeng Guo

    2012-01-01

    Full Text Available Nutritious and functional foods from wheat have received great attention in recent years. Colored-grain wheat contains a large number of nutrients such as anthocyanins and hence the breeding is interesting. In this work, colored-grained wheat lines of mixed pollination of einkorn wheat (Triticum boeoticum, AA and French rye (French Secale cereale, RR were used as male parents and wheat line Y1642 (derived from common wheat and Agropyron elongatum, AABBDD was used as the female parent. These colored wheat were used for diallel cross to study the segregation ratios of F1 colored grains. Results show that the color inheritance of purple-grained wheat follows a maternal inheritance pattern and that the blue-grained wheat expresses xenia in most cases. In some circumstances, the grains with different color shades appear in the same spike.

  3. Benchmark data set for wheat growth models

    DEFF Research Database (Denmark)

    Asseng, S; Ewert, F.; Martre, P;

    2015-01-01

    The data set includes a current representative management treatment from detailed, quality-tested sentinel field experiments with wheat from four contrasting environments including Australia, The Netherlands, India and Argentina. Measurements include local daily climate data (solar radiation, max...

  4. Patterns of suspected wheat-related allergy

    DEFF Research Database (Denmark)

    Junker Christensen, Morten; Eller, Esben; Mortz, Charlotte G;

    2014-01-01

    lead to occupational rhinitis and/or asthma. METHODS: We retrospectively reviewed the case notes of 156 patients (age 0.7 - 73.3 years) with a case history of wheat allergy. The population was divided into three groups, 1: Wheat allergy elicited by ingestion, 2: By inhalation and 3: WDEIA. All patients...... were examined with detailed case history, specific IgE (sIgE), Skin Prick Test (SPT) and wheat challenge (nasal or oral ± exercise). Details of the case history were extracted from the patients´ case records. RESULTS: Group 1: Twenty one of 95 patients were challenge positive (15 children, 6 adults...... adults with occupational asthma or rhinitis were challenge positive. None outgrew their allergy. Seven had positive sIgE and 10 had positive SPT to wheat. Group 3: Ten of 48 (adolescent/adults) were positive when challenged during exercise. Challenge positive patients showed significantly higher levels...

  5. Formation of nanoporous aerogels from wheat starch.

    Science.gov (United States)

    Ubeyitogullari, Ali; Ciftci, Ozan N

    2016-08-20

    Biodegradable nanoporous aerogels were obtained from wheat starch using a simple and green method based on supercritical carbon dioxide (SC-CO2) drying. Effects of processing parameters (temperature, wheat starch concentration and mixing rate during gelatinization; temperature, pressure, and flow rate of CO2, during SC-CO2 drying) on the aerogel formation were investigated, and optimized for the highest surface area and smallest pore size of the aerogels. At the optimized conditions, wheat starch aerogels had surface areas between 52.6-59.7m(2)/g and densities ranging between 0.05-0.29g/cm(3). The average pore size of the starch aerogels was 20nm. Starch aerogels were stable up to 280°C. Due to high surface area and nanoporous structure, wheat starch aerogels are promising carrier systems for bioactives and drugs in food and pharmaceutical industries. PMID:27178916

  6. QUALITY PARAMETRES OF EMMER WHEAT LANDRACES

    Directory of Open Access Journals (Sweden)

    Petr KONVALINA

    2009-03-01

    Full Text Available Emmer wheat, Triticum dicoccum SCHUEBL, is an old variety of cereals which has been traditionally grown in aride areas. Nowdays, it is mainly grown in Italy, Spain, Turkey, Austria and in the Czech republic. This article deals with a study of quality parametres and selected economic parametres of 6 varieties coming from the genetic resources of emmer wheat. High crude protein content in grain was proved during the trials. Nevertheless, such a characteristic is not suitable for the classical bakery processing (production of leavened products. Low figure of the harvest index is supposed to be the most problematic economic character. However, emmer wheat is a suitable variety for organic farming system. Growing of emmer wheat contributes to an extension of the agrobiodiversity in the countryside and to the suistainable development of a region.

  7. LIBERALIZATION OF THE TAIWAN WHEAT MILLING INDUSTRY

    OpenAIRE

    Stiegert, Kyle W.; Peng, Hsing Ming

    1998-01-01

    Taiwan, in just the past two years, lifted quoto restrictions on wheat imports and lowered tariff barriers. These changes along with the antitrust movement and severe overcapacity will be the catalysts for tremendous structural changes in the way wheat millers compete for domestic market share and contracts for flour. The purpose of this study was to examine the impact of liberalization on the Taiwan milling industry.

  8. Wheat production in controlled environments

    Science.gov (United States)

    Salisbury, Frank B.; Bugbee, Bruce; Bubenheim, David

    Our goal is to optimize conditions for maximum yield and quality of wheat to be used in a controlled-environment, life-support system (CELSS) in a Lunar or Martian base or perhaps in a space craft. With yields of 23 to 57 g m-2 d-1 of edible biomass, a minimum size for a CELSS would be between 12 and 30 m2 per person, utilizing about 600 W m-2 of electrical energy for artificial light. Temperature, irradiance, photoperiod, carbon-dioxide levels, humidity, and wind velocity are controlled in state-of-the-art growth chambers. Nutrient solutions (adjusted for wheat) are supplied to the roots via a recirculating system that controls pH by adding HNO3 and controlling the NO3/NH4 ratio in solution. A rock-wool plant support allows direct seeding and densities up to 10,000 plants per meter2. Densities up to 2000 plants m-2 appear to increase seed yield. Biomass production increases almost linearily with increasing irradiance from 400 to 1700 μmol m-2 s-1 of photosynthetic photon flux (PPF), but the efficiency of light utilization decreases over this range. Photoperiod and temperature both have a profound influence on floral initiation, spikelet formation, stem elongation, and fertilization. High temperatures (25 to 27°C) and long days shorten the life cycle and promote rapid growth, but cooler temperatures (20°C) and shorter days greatly increase seed number per head and thus yield (g m-2). The life cycle is lengthened in these conditions but yield per day (g m-2 d-1) is still increased. We have evaluated about 600 cultivars from around the world and have developed several breeding lines for our controlled conditions. Some of our ultra-dwarf lines (30 to 50 cm tall) look especially promising with high yields and high harvest indices (percent edible biomass).

  9. Evaluation of irradiated wheat populations. Vol. 4

    International Nuclear Information System (INIS)

    This study was carried out from 1992 to 1994. It aimed to study genetic behaviour for plant height, dry weight/plant, earliness, grain yield/plant, and 100-grain weight at harvest time in three wheat cultivars Mexi back, Giza 155, and Saka 69; and and their hybrids in F3 - M1, and F4 - M2 mutagenic generations after treatment of dry seeds with gamma ray doses of 75, 100, and 125 Gy. All doses caused an increase or decrease in growth, yield, and yield attributes of the wheat cultivars. In G155 Mexi back hybrid wheat the 100 Gy caused an increase in 100 - grain weight, grain yield/plant, and dry weight/plant in F4 - M2 generation only. But in Mexi back X G155 hybrid wheat the 75 Gy increased plant height, 100 - grain weight, grain yield/plant, and dry weight/plant in both generations F3 - M1 and F4 -M2. SK69 X Mexi back hybrid wheat at 75 Gy caused earliness by about 13 days, and high grain yield in F4 - M2 generation only. however, in Mexi back x SK69 hybrid wheat, 100 Gy caused earliness about 7 days but with low grain yield. 3 tabs

  10. Detection of a copy number mutation on chromosome 7q36 using the Affymetrix SNP Array 6.0%应用Affymetrix全基因组芯片检测染色体7q36区域的DNA拷贝数突变

    Institute of Scientific and Technical Information of China (English)

    马芬; 吴凤霞; 李宁; 柳青; 杨威; 张学; 孙淼

    2009-01-01

    Objectives To refine the extent of a 7q36 duplication in a Chinese family with triphalangeal thumb-polysyndaetyly syndrome and syndactyly type Ⅳ using the Affymetrix SNP Array combined with quantitative real-time PCR (qPCR). Methods Genomic DNA was extracted and genotyped with the Affymetrix Genome-Wide Human SNP Array 6.0. Copy number analysis was performed on the raw data using the Affymetrix Genotyping Console 3. 0. The qPCR assay was carried out using the AACT method to validate the duplication. Results With use of the combined approach, we were able to narrow down the breakpoint intervals from 113 kb and 33 kb to 5.4 kb and 1.8 kb, respectively. These allowed us to refine the extent of the 7q36 duplication from 291-437 kb to 379-387kb. Conclusion Screening with the Affymetrix Genome-Wide Human SNP Array 6. 0 followed by the validation using qPCR is a reliable approach for high-resolution detection of copy number mutations.%目的 应用Affymetrix全基因组芯片结合荧光定量PCR(quantitative real-time PCR,qPCR)技术,进行致病性DNA拷贝数变异的精细定位研究.方法 以一个定位于染色体7q36的中国人遗传性三节拇指多并指综合征伴随Ⅳ型并指家系中的一例患者为研究对象.收集外周血标本,常规提取基因组DNA.应用Affymetrix Genome-Wide Human SNP Array 6.0芯片,将基因组DNA纯化,经过酶切、连接、扩增、标记、杂交、染色和扫描等步骤后得到原始数据,应用Affymetrix Genotyping Console 3.0软件进行拷贝数分析.在经芯片分析所确定的重复范围内设计引物,采用qPCR方法进行验证,并进一步缩小断端范围、精确重复区域范围.结果 将患者重复区域两断端范围由原来的113 kb和33 kb分别缩小到5.4 kb和1.8 kb,致病性DNA重复范围由原来的291~437 kb精确至379~387 kb.结论 应用Affymetrix全基因组芯片联合qPCR技术可以实现对DNA拷贝数突变的精确、可靠的检测.

  11. Viscoelastic Properties of Rubber Composites Reinforced by Wheat Gluten and Wheat Starch Co-filler

    Science.gov (United States)

    Due to different abilities of wheat gluten (WG) and wheat starch (WS) to increase the modulus of rubber composites, the composite properties can be adjusted by varying the ratio of WG to WS as a co-filler. This study shows that the co-filler composites became more temperature dependent as the WG co...

  12. Wheat CBL-interacting protein kinase 25 negatively regulates salt tolerance in transgenic wheat.

    Science.gov (United States)

    Jin, Xia; Sun, Tao; Wang, Xiatian; Su, Peipei; Ma, Jingfei; He, Guangyuan; Yang, Guangxiao

    2016-01-01

    CBL-interacting protein kinases are involved in plant responses to abiotic stresses, including salt stress. However, the negative regulating mechanism of this gene family in response to salinity is less reported. In this study, we evaluated the role of TaCIPK25 in regulating salt response in wheat. Under conditions of high salinity, TaCIPK25 expression was markedly down-regulated in roots. Overexpression of TaCIPK25 resulted in hypersensitivity to Na(+) and superfluous accumulation of Na(+) in transgenic wheat lines. TaCIPK25 expression did not decline in transgenic wheat and remained at an even higher level than that in wild-type wheat controls under high-salinity treatment. Furthermore, transmembrane Na(+)/H(+) exchange was impaired in the root cells of transgenic wheat. These results suggested that TaCIPK25 negatively regulated salt response in wheat. Additionally, yeast-one-hybrid, β-glucuronidase activity and DNA-protein-interaction-enzyme-linked-immunosorbent assays showed that the transcription factor TaWRKY9 bound W-box in the TaCIPK25 promoter region. Quantitative real-time polymerase chain reaction assays showed concomitantly inverted expression patterns of TaCIPK25 and TaWRKY9 in wheat roots under salt treatment, ABA application and inhibition of endogenous ABA condition. Overall, based on our results, in a salt stress condition, the negative salt response in wheat involved TaCIPK25 with the expression regulated by TaWRKY9. PMID:27358166

  13. Histological, genetical and epidemiological studies on partial resistance in wheat to wheat leaf rust.

    NARCIS (Netherlands)

    Broers, L.H.M.; Jacobs, Th.

    1989-01-01

    Partial resistance (PR) of wheat to wheat leaf rust acted in two steps. The first step led to a reduced infection frequency (IF), the second step to a longer latency period (LP).The genes for a prolonged LP inherited in a recessive way and showed additive gene action. The PR-genotype Akabozu carried

  14. [Wheat dependent exercise induced anaphylaxis possibly sensitized by the hydrolyzed wheat proteins in a facial cleansing soap].

    Science.gov (United States)

    Kobayashi, Miwa; Okura, Risa; Yoshioka, Haruna; Hiromasa, Kana; Yoshioka, Manabu; Nakamura, Motonobu

    2012-03-01

    There are increasing cases of wheat dependent exercise-induced anaphylaxis (WDEIA) with transcutaneous or transmucosal sensitization. Hydrolyzed wheat included in a certain brand of soap was identified as a cause of sensitization. The useful clues to detect this disorder consist of the patient's past usage of a soap containing hydrolyzed wheat, the appearance of cutaneous or mucosal symptoms after the intake of wheat or washing with this soap, and a high level of specific IgE for wheat gluten. Because hydrolyzed wheat is used as an additive in a wide variety of cosmetics, we should pay careful attention to the ingredients of cosmetics when observing WDEIA.

  15. Virginia Tech forms new partnership to develop better wheat varieties

    OpenAIRE

    Greiner, Lori A.

    2010-01-01

    Virginia Tech and Monsanto announced today a mutually beneficial public-private collaborative agreement that will allow both parties to improve their wheat breeding programs and generate improved wheat varieties for growers in Virginia.

  16. Exploiting resource use efficiency and resilience in ancient wheat species

    OpenAIRE

    Parmar, Anisha

    2014-01-01

    Modern bread wheat (Triticum aestivum) initially derived from wild progenitors which underwent hybridisation and domestication events. It is hypothesised that modern plant breeding has reduced the genetic variation among modern cultivars (Sparkes, 2010). Ancient wheat species form a conduit between wild ancient wheat and cultivated Triticum species, and may harbour the genetic variation required to supplement the modern bread wheat gene pool. The current work investigated a range of morpholog...

  17. Do we need to worry about eating wheat?

    OpenAIRE

    Shewry, P R; Hey, S. J.

    2016-01-01

    Abstract Wheat is a staple food throughout the temperate world and an important source of nutrients for many millions of people. However, the last few years have seen increasing concerns about adverse effects of wheat on health, particularly in North America and Europe, with the increasing adoption of wheat‐free or gluten‐free diets. This relates to two concerns: that wheat products are disproportionally responsible for increases in obesity and type 2 diabetes and that wheat gluten proteins c...

  18. THE PERFORMANCE OF AGRICULTURAL MARKET ADVISORY SERVICES IN MARKETING WHEAT

    OpenAIRE

    Jirik, Mark A.; Irwin, Scott H.; Good, Darrel L.; Jackson, Thomas E.; Martines-Filho, Joao Gomes

    2000-01-01

    The purpose of this paper is to investigate the performance of agricultural market advisory services in marketing wheat. Two key performance questions are addressed: 1) Do market advisory services, on average, outperform an appropriate wheat market benchmark? and 2) Do market advisory services exhibit persistence in their wheat performance from year-to-year? Market advisory service recommendations for wheat are available from the AgMAS Project for the 1995, 1996, 1997 and 1998 marketing years...

  19. 7 CFR 782.18 - Wheat purchased for export.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 7 2010-01-01 2010-01-01 false Wheat purchased for export. 782.18 Section 782.18... § 782.18 Wheat purchased for export. (a) This section applies to an importer or subsequent buyer who imports or purchases Canadian-produced wheat for the purpose of export to a foreign country...

  20. 21 CFR 139.140 - Wheat and soy macaroni products.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Wheat and soy macaroni products. 139.140 Section... Macaroni and Noodle Products § 139.140 Wheat and soy macaroni products. (a) Wheat and soy macaroni products...(a), (f)(2), (f)(3), and (g), except that: (1) Soy flour is added in a quantity not less than...

  1. Wheat mill stream properties for discrete element method modeling

    Science.gov (United States)

    A discrete phase approach based on individual wheat kernel characteristics is needed to overcome the limitations of previous statistical models and accurately predict the milling behavior of wheat. As a first step to develop a discrete element method (DEM) model for the wheat milling process, this s...

  2. 19 CFR 19.32 - Wheat manipulation; reconditioning.

    Science.gov (United States)

    2010-04-01

    ... 19 Customs Duties 1 2010-04-01 2010-04-01 false Wheat manipulation; reconditioning. 19.32 Section 19.32 Customs Duties U.S. CUSTOMS AND BORDER PROTECTION, DEPARTMENT OF HOMELAND SECURITY; DEPARTMENT... Bonded for the Storage of Wheat § 19.32 Wheat manipulation; reconditioning. (a) The mixing, blending,...

  3. Microsatellites in wheat and their applications

    International Nuclear Information System (INIS)

    The development of large panels of simply analyzable genetic markers for diversity studies and tagging, agronomically important genes in hexaploid bread wheat is an important goal in applied cereal genetic research. We have isolated and sequenced over two-hundred clones containing microsatellites from the wheat genome, and have tested 150 primer pairs for genetic polymorphism using a panel of ten wheat varieties, including the parents of our main mapping cross. A total of 125 loci were detected by 82 primer pairs, of which 105 loci from 63 primer pairs can be unequivocally allocated to one of the wheat chromosomes. A relatively low frequency of the loci detected are from the D-genome (24%). Generally, the microsatellites show high levels of genetic polymorphism and an average 3.5 alleles per locus with an average polymorphism information content (PIC) value of 0.5. The observed levels of polymorphism are positively correlated with the length of the microsatellite repeats. A high proportion, approximately one half, of primer pairs designed to detect simple sequence repeat (SSR) variation in wheat do not generate the expected amplification products and, more significantly, often generate unresolvable Polymerase Chain Reaction (PCR) products. In general our results agree closely with those obtained from other recent studies using microsatellites in plants. (author)

  4. Ancestral QTL alleles from wild emmer wheat improve drought resistance and productivity in modern wheat cultivars

    Directory of Open Access Journals (Sweden)

    Lianne eMerchuk-Ovnat

    2016-04-01

    Full Text Available Wild emmer wheat (Triticum turgidum ssp. dicoccoides is considered a promising source for improving stress resistances in domesticated wheat. Here we explored the potential of selected quantitative trait loci (QTLs from wild emmer wheat, introgressed via marker-assisted selection, to enhance drought resistance in elite durum (T. turgidum ssp. durum and bread (T. aestivum wheat cultivars. The resultant near-isogenic lines (BC3F3 and BC3F4 were genotyped using SNP array to confirm the introgressed genomic regions and evaluated in two consecutive years under well-watered (690–710 mm and water-limited (290–320 mm conditions. Three of the introgressed QTLs were successfully validated, two in the background of durum wheat cv. Uzan (on chromosomes 1BL and 2BS, and one in the background of bread wheat cvs. Bar Nir and Zahir (chromosome 7AS. In most cases, the QTL x environment interaction was validated in terms of improved grain yield and biomass - specifically under drought (7AS QTL in cv. Bar Nir background, under both treatments (2BS QTL, and a greater stability across treatments (1BL QTL. The results provide a first demonstration that introgression of wild emmer QTL alleles can enhance productivity and yield stability across environments in domesticated wheat, thereby enriching the modern gene pool with essential diversity for the improvement of drought resistance.

  5. Variation in susceptibility to Wheat dwarf virus among wild and domesticated wheat.

    Directory of Open Access Journals (Sweden)

    Jim Nygren

    Full Text Available We investigated the variation in plant response in host-pathogen interactions between wild (Aegilops spp., Triticum spp. and domesticated wheat (Triticum spp. and Wheat dwarf virus (WDV. The distribution of WDV and its wild host species overlaps in Western Asia in the Fertile Crescent, suggesting a coevolutionary relationship. Bread wheat originates from a natural hybridization between wild emmer wheat (carrying the A and B genomes and the wild D genome donor Aegilops tauschii, followed by polyploidization and domestication. We studied whether the strong selection during these evolutionary processes, leading to genetic bottlenecks, may have resulted in a loss of resistance in domesticated wheat. In addition, we investigated whether putative fluctuations in intensity of selection imposed on the host-pathogen interactions have resulted in a variation in susceptibility to WDV. To test our hypotheses we evaluated eighteen wild and domesticated wheat taxa, directly or indirectly involved in wheat evolution, for traits associated with WDV disease such as leaf chlorosis, different growth traits and WDV content. The plants were exposed to viruliferous leafhoppers (Psammotettix alienus in a greenhouse trial and evaluated at two time points. We found three different plant response patterns: i continuous reduction in growth over time, ii weak response at an early stage of plant development but a much stronger response at a later stage, and iii remission of symptoms over time. Variation in susceptibility may be explained by differences in the intensity of natural selection, shaping the coevolutionary interaction between WDV and the wild relatives. However, genetic bottlenecks during wheat evolution have not had a strong impact on WDV resistance. Further, this study indicates that the variation in susceptibility may be associated with the genome type and that the ancestor Ae. tauschii may be useful as genetic resource for the improvement of WDV resistance in

  6. Evaluation of broiler performance when fed roundup ready wheat event mon 71800, control, and commercial wheat varieties

    NARCIS (Netherlands)

    Kan, C.A.; Hartnell, G.F.

    2004-01-01

    We evaluated the nutritional value of broiler diets containing approximately 40% wheat grain from Roundup Ready wheat (MON 71800), its similar nontransgenic control (MON 71900), or reference commercial wheat varieties. The feeding trial lasted 40 d, and each treatment consisted of 10 replicates of 1

  7. Iron Biofortification of Modern Wheat Cultivar

    DEFF Research Database (Denmark)

    Shirvanehdeh, Behrooz Darbani; Brinch-Pedersen, Henrik; Tauris, Birgitte;

    2011-01-01

    Iron deficiency anemia (IDA) is a public health problem and is primarily due to poverty in the developing world which leads to a simple, undiversified diet that largely is based on stables, such as wheat and rice. One of the key targets in the international alliance HarvestPlus is to boost the iron...... content of these stables to improve the living conditions of the poor people. As member of HarvestPlus we are working to improve the iron content quanti- and qualitatively in the wheat grain. Therefore, wheat grain has been subjected to work through endosperm-specific expression of the ferritin protein...... as an iron storage complex. Primary evaluation of Bobwhite cv. has approved that endosperm expression of wheat’s own ferritin, works as a sink for iron and accumulates two to three folds more iron in the endosperm. To bring the bioavailable iron on the people's tables, modern cultivars were applied for co...

  8. NUTRITIONAL CHARACTERISTICS OF EMMER WHEAT VARIETIES

    Directory of Open Access Journals (Sweden)

    Magdaléna Lacko - Bartošová

    2015-02-01

    Full Text Available The objective of this study was to evaluate the nutritional compounds (fat, sugars, crude protein, soluble fiber, ash and starch of four emmer wheat varieties grown under the conditions of organic farming system. The experiment was established on Scientific Research base Dolná Malanta, near Nitra in Slovakia during 2010 – 2011 and 2011 – 2012 growing seasons. Nutritional parameters, except crude protein content, were not influenced by the variety and weather conditions. Agnone variety had the highest content of fat, crude protein and starch but the lowest content of soluble dietary fiber. The lowest values of fat, crude protein had Molise sel Colli variety; Farvento variety had the lowest sugars and starch content. Emmer wheat as ancient wheat has a unique composition in secondary components, such as starch, which may play a role as functional food ingredients.

  9. Common bunt resistant wheat composite cross populations

    DEFF Research Database (Denmark)

    Steffan, Philipp Matthias; Borgen, A.; Backes, Gunter Martin;

    Utilising diverse populations instead of genetically homogeneous varieties is expected to lead to a number of advantages in cereal production. These include reduced epidemics of plant diseases, improved weed competition and better exploitation of soil nutrients, resulting in improved yield...... that the highest benefits of utilizing diverse populations can be achieved. BIOBREED focuses on three main aspects of wheat population breeding for organic and low input production systems: i) common bunt (caused by Tilletia caries) resistance, ii) selection for improved protein content and iii) the influence...... stability. However, a number of challenges must be met before diverse wheat populations can be introduced into commercial wheat production: one of these is the development of breeding technologies based on mass selection which enable breeders and farmers to improve specific traits in populations...

  10. Pelletizing properties of torrefied wheat straw

    DEFF Research Database (Denmark)

    Stelte, Wolfgang; Nielsen, Niels Peter; Hansen, Hans Ove;

    2013-01-01

    Combined torrefaction and pelletization are used to increase the fuel value of biomass by increasing its energy density and improving its handling and combustion properties. However, pelletization of torrefied biomass can be challenging and in this study the torrefaction and pelletizing properties...... of wheat straw have been analyzed. Laboratory equipment has been used to investigate the pelletizing properties of wheat straw torrefied at temperatures between 150 and 300 °C. IR spectroscopy and chemical analyses have shown that high torrefaction temperatures change the chemical properties of the wheat...... straw significantly, and the pelletizing analyses have shown that these changes correlate to changes in the pelletizing properties. Torrefaction increase the friction in the press channel and pellet strength and density decrease with an increase in torrefaction temperature....

  11. Antioxidant responses of wheat plants under stress

    Directory of Open Access Journals (Sweden)

    Andréia Caverzan

    2016-03-01

    Full Text Available Abstract Currently, food security depends on the increased production of cereals such as wheat (Triticum aestivum L., which is an important source of calories and protein for humans. However, cells of the crop have suffered from the accumulation of reactive oxygen species (ROS, which can cause severe oxidative damage to the plants, due to environmental stresses. ROS are toxic molecules found in various subcellular compartments. The equilibrium between the production and detoxification of ROS is sustained by enzymatic and nonenzymatic antioxidants. In the present review, we offer a brief summary of antioxidant defense and hydrogen peroxide (H2O2 signaling in wheat plants. Wheat plants increase antioxidant defense mechanisms under abiotic stresses, such as drought, cold, heat, salinity and UV-B radiation, to alleviate oxidative damage. Moreover, H2O2 signaling is an important factor contributing to stress tolerance in cereals.

  12. Redesigning the exploitation of wheat genetic resources.

    Science.gov (United States)

    Longin, C Friedrich H; Reif, Jochen C

    2014-10-01

    More than half a million wheat genetic resources are resting in gene banks worldwide. Unlocking their hidden favorable genetic diversity for breeding is pivotal for enhancing grain yield potential, and averting future food shortages. Here, we propose exploiting recent advances in hybrid wheat technology to uncover the masked breeding values of wheat genetic resources. The gathered phenotypic information will enable a targeted choice of accessions with high value for pre-breeding among this plethora of genetic resources. We intend to provoke a paradigm shift in pre-breeding strategies for grain yield, moving away from allele mining toward genome-wide selection to bridge the yield gap between genetic resources and elite breeding pools. PMID:25052155

  13. Plasma-Assisted Pretreatment of Wheat Straw

    DEFF Research Database (Denmark)

    Schultz-Jensen, Nadja; Leipold, Frank; Bindslev, Henrik;

    2011-01-01

    and milled particle size (the extent to which the wheat straw was milled) were investigated and optimized. The developed methodology offered the advantage of a simple and relatively fast (0.5–2 h) pretreatment allowing a dry matter concentration of 45–60%. FTIR measurements did not suggest any structural...... straw with desired lignin content because of the online analysis. The O3 consumption of wheat straw and its polymeric components, i.e., cellulose, hemicellulose, and lignin, as well as a mixture of these, dry as well as with 50% water, were studied. Furthermore, the process parameters dry matter content...... effects on cellulose and hemicellulose by the O3 treatment. The cost and the energy consumption for lignin degradation of 100 g of wheat straw were calculated....

  14. Drought Tolerance in Modern and Wild Wheat

    Directory of Open Access Journals (Sweden)

    Hikmet Budak

    2013-01-01

    Full Text Available The genus Triticum includes bread (Triticum aestivum and durum wheat (Triticum durum and constitutes a major source for human food consumption. Drought is currently the leading threat on world's food supply, limiting crop yield, and is complicated since drought tolerance is a quantitative trait with a complex phenotype affected by the plant's developmental stage. Drought tolerance is crucial to stabilize and increase food production since domestication has limited the genetic diversity of crops including wild wheat, leading to cultivated species, adapted to artificial environments, and lost tolerance to drought stress. Improvement for drought tolerance can be achieved by the introduction of drought-grelated genes and QTLs to modern wheat cultivars. Therefore, identification of candidate molecules or loci involved in drought tolerance is necessary, which is undertaken by “omics” studies and QTL mapping. In this sense, wild counterparts of modern varieties, specifically wild emmer wheat (T. dicoccoides, which are highly tolerant to drought, hold a great potential. Prior to their introgression to modern wheat cultivars, drought related candidate genes are first characterized at the molecular level, and their function is confirmed via transgenic studies. After integration of the tolerance loci, specific environment targeted field trials are performed coupled with extensive analysis of morphological and physiological characteristics of developed cultivars, to assess their performance under drought conditions and their possible contributions to yield in certain regions. This paper focuses on recent advances on drought related gene/QTL identification, studies on drought related molecular pathways, and current efforts on improvement of wheat cultivars for drought tolerance.

  15. Biotechnology Assisted Wheat Breeding for Organic Agriculture

    DEFF Research Database (Denmark)

    Steffan, Philipp Matthias

    markers for common bunt resistance may potentially help to speed up resistance breeding by shortening the long time required for phenotypic disease screening. Here, we report the results of 1. an association mapping study for common bunt resistance, 2. a QTL mapping study for the localization of common...... model identified two novel QTL for common bunt resistance located on wheat chromosomes 2B and 7 A. The identification of new resistance loci may help to broaden our understanding of common bunt resistance in wheat, and QTL may potentially be exploited by marker assisted selection in plant breeding. QTL...

  16. GLASS TRANSITION OF HYDRATED WHEAT GLIADIN POWDERS

    Institute of Scientific and Technical Information of China (English)

    Shao-min Sun; Li Zhao; Yi-hu Song; Qiang Zheng

    2011-01-01

    Modulated-temperature differential scanning calorimetric and dynamic mechanical analyses and dielectric spectroscopy were used to investigate the glass transition of hydrated wheat gliadin powders with moisture absorption ranged from 2.30 db% to 18.21 db%. Glass transition temperature (Tg) of dry wheat gliadin was estimated according to the GordonTaylor equation. Structural heterogeneity at high degrees of hydration was revealed in dielectric temperature and frequency spectra. The activation energies (Ea) of the two relaxations were calculated from Arrhenius equation.

  17. Antioxidant properties of wheat germ protein hydrolysates evaluated in vitro

    Institute of Scientific and Technical Information of China (English)

    CHENG Yun-hui; WANG Zhang; XU Shi-ying

    2006-01-01

    Wheat germ protein hydrolysates were prepared by protease hydrolysis, ultrafiltration and dynamical adsorption of resin. The total amount of amino acids in 100 g wheat germ protein hydrolysates is 93.95 g. Wheat germ protein hydrolysates are primarily composed of 4 fractions: 17.78 % in the relative molecular mass range of 11 563 -1 512, 17.50% in 1512 -842, 27.38% in 842- 372 and 30.65% in 372- 76, respectively. The antioxidant properties of wheat germ protein hydrolysates were evaluated by using different antioxidant tests in vitro. 1.20 g/L wheat germ protein hydrolysates exhibit 78.75% inhibition of peroxidation in linolei acid system; and 1.6 g/L wheat germ protein hydrolysates show 81.11% scavenging effect on the 1,1-diphenyl-2-picrylhrazyl radical. The reducing power of 2.50 g/L wheat germ protein hydrolysates is 0. 84. Furthermore, the scavenging activity of 0.60 g/L wheat germ protein hydrolysates against superoxide radical is 75. 40%; 0. 50 g/L wheat germ protein hydrolysates exhibit63.35 % chelating effect on ferrous ion. These antioxidant activities of wheat germ protein hydrolsates increase with the increase of its concentration. Experimental results suggest that wheat germ protein hydrolysate is a suitable natural antioxidant rich in nutrition and nontoxic.

  18. Study on Wheat Cold Source and Its Characters

    Institute of Scientific and Technical Information of China (English)

    ZHANG Song-wu; WANG Chang-fa

    2002-01-01

    On the basis of tests and studies for many years, wheat cold source has been discovered in natural world. It is a donor material supplying a low temperature and causing stronger cooling effect, that is,the canopy temperature of its progeny can be descended universally and some non-cold type acceptor wheat can turn into cold type wheat having good metabolic functions under the condition of that acceptor wheat accepts the gamete of donor wheat supplying a low temperature. Contrast between wheat cold source and general wheat having no the ability of supplying a low temperature shows that second heat source temperature and plant temperature of wheat cold source not only are lower than those of general wheat but its root vigor, rate of awn etiolation, functional duration of leaf, chlorophyll content, soluble protein content, SOD activity, net photosynthetic rate, etc, are also more excellent than those of general wheat, and these all provide certain ecological and physiological bases for the distinction and selection of wheat cold source.

  19. Natural variation in grain composition of wheat and related cereals.

    Science.gov (United States)

    Shewry, Peter R; Hawkesford, Malcolm J; Piironen, Vieno; Lampi, Ann-Maija; Gebruers, Kurt; Boros, Danuta; Andersson, Annica A M; Åman, Per; Rakszegi, Mariann; Bedo, Zoltan; Ward, Jane L

    2013-09-01

    The wheat grain comprises three groups of major components, starch, protein, and cell wall polysaccharides (dietary fiber), and a range of minor components that may confer benefits to human health. Detailed analyses of dietary fiber and other bioactive components were carried out under the EU FP6 HEALTHGRAIN program on 150 bread wheat lines grown on a single site, 50 lines of other wheat species and other cereals grown on the same site, and 23-26 bread wheat lines grown in six environments. Principal component analysis allowed the 150 bread wheat lines to be classified on the basis of differences in their contents of bioactive components and wheat species (bread, durum, spelt, emmer, and einkorn wheats) to be clearly separated from related cereals (barley, rye, and oats). Such multivariate analyses could be used to define substantial equivalence when novel (including transgenic) cereals are considered.

  20. Application of Synthetic Hexaploid Wheat Derived from T.Durum, Ae. taushiiin Common Wheat Breeding for FHB Resistance

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    The F1 and F4 plants of 'synthetic hexaploid wheat/common wheat'crosses and part of their parents were inoculated with Fusarium graminearum to evaluate FHB resistance.The results showed tht the scab resistance in the F1 varied with the synthetic wheat accessions used as crossing parents.In the F4,some resistant head lines were generated from the crosses,although their parents had different scab resistance levels.It indicated that synthetic hexaploid wheat are useful in wheat breeding for scab resistance.

  1. Wheat Bran Phenolic Acids: Bioavailability and Stability in Whole Wheat-Based Foods

    OpenAIRE

    Barbara Laddomada; Sofia Caretto; Giovanni Mita

    2015-01-01

    Wheat bran is generally considered a byproduct of the flour milling industry, but it is a great source of fibers, minerals, and antioxidants that are important for human health. Phenolic acids are a specific class of wheat bran components that may act as antioxidants to prevent heart disease and to lower the incidence of colon cancer. Moreover, phenolic acids have anti-inflammatory properties that are potentially significant for the promotion of gastrointestinal health. Evidence on the benefi...

  2. Genetically Divergent Types of the Wheat Leaf Fungus Puccinia triticina in Ethiopia, a Center of Tetraploid Wheat Diversity.

    Science.gov (United States)

    Kolmer, J A; Acevedo, M A

    2016-04-01

    Collections of Puccinia triticina, the wheat leaf rust fungus, were obtained from tetraploid and hexaploid wheat in the central highlands of Ethiopia, and a smaller number from Kenya, from 2011 to 2013, in order to determine the genetic diversity of this wheat pathogen in a center of host diversity. Single-uredinial isolates were derived and tested for virulence phenotype to 20 lines of Thatcher wheat that differ for single leaf rust resistance genes and for molecular genotypes with 10 simple sequence repeat (SSR) primers. Nine virulence phenotypes were described among the 193 isolates tested for virulence. Phenotype BBBQJ, found only in Ethiopia, was predominantly collected from tetraploid wheat. Phenotype EEEEE, also found only in Ethiopia, was exclusively collected from tetraploid wheat and was avirulent to the susceptible hexaploid wheat 'Thatcher'. Phenotypes MBDSS and MCDSS, found in both Ethiopia and Kenya, were predominantly collected from common wheat. Phenotypes CCMSS, CCPSS, and CBMSS were found in Ethiopia from common wheat at low frequency. Phenotypes TCBSS and TCBSQ were found on durum wheat and common wheat in Kenya. Four groups of distinct SSR genotypes were described among the 48 isolates genotyped. Isolates with phenotypes BBBQJ and EEEEE were in two distinct SSR groups, and isolates with phenotypes MBDSS and MCDSS were in a third group. Isolates with CCMSS, CCPSS, CBMSS, TCBSS, and TCBSQ phenotypes were in a fourth SSR genotype group. The diverse host environment of Ethiopia has selected and maintained a genetically divergent population of P. triticina.

  3. Wheat-dependent exercise-induced anaphylaxis sensitized with hydrolyzed wheat protein in soap.

    Science.gov (United States)

    Chinuki, Yuko; Morita, Eishin

    2012-12-01

    Wheat-dependent exercise-induced anaphylaxis (WDEIA) is a specific form of wheat allergy typically induced by exercise after ingestion of wheat products. Wheat ω-5 gliadin is a major allergen associated with conventional WDEIA, and detection of serum immunoglobulin E (IgE) specific to recombinant ω-5 gliadin is a reliable method for its diagnosis. Recently, an increased incidence of a new subtype of WDEIA, which is likely to be sensitized via a percutaneous and/or rhinoconjunctival route to hydrolyzed wheat protein (HWP), has been observed. All of the patients with this new subtype had used the same brand of soap, which contained HWP. Approximately half of these patients developed contact allergy several months later and subsequently developed WDEIA. In each of these patients, contact allergy with soap exposure preceded food ingestion-induced reactions. Other patients directly developed generalized symptoms upon ingestion of wheat products. The predominant observed symptom of the new WDEIA subtype was angioedema of the eyelids; a number of patients developed anaphylaxis. This new subtype of WDEIA has little serum ω-5 gliadin-specific serum IgE.

  4. Wheat-Dependent Exercise-Induced Anaphylaxis Sensitized with Hydrolyzed Wheat Protein in Soap

    Directory of Open Access Journals (Sweden)

    Yuko Chinuki

    2012-01-01

    Full Text Available Wheat-dependent exercise-induced anaphylaxis (WDEIA is a specific form of wheat allergy typically induced by exercise after ingestion of wheat products. Wheat ω-5 gliadin is a major allergen associated with conventional WDEIA, and detection of serum immunoglobulin E (IgE specific to recombinant ω-5 gliadin is a reliable method for its diagnosis. Recently, an increased incidence of a new subtype of WDEIA, which is likely to be sensitized via a percutaneous and/or rhinoconjunctival route to hydrolyzed wheat protein (HWP, has been observed. All of the patients with this new subtype had used the same brand of soap, which contained HWP. Approximately half of these patients developed contact allergy several months later and subsequently developed WDEIA. In each of these patients, contact allergy with soap exposure preceded food ingestion-induced reactions. Other patients directly developed generalized symptoms upon ingestion of wheat products. The predominant observed symptom of the new WDEIA subtype was angioedema of the eyelids; a number of patients developed anaphylaxis. This new subtype of WDEIA has little serum ω-5 gliadin-specific serum IgE.

  5. Binding of zinc and iron to wheat bread, wheat bran, and their components.

    Science.gov (United States)

    Ismail-Beigi, F; Faraji, B; Reinhold, J G

    1977-10-01

    Wholemeal wheat bread decreases the availability and intestinal absorption of divalent metals. To define this action further, binding of zinc in vitro to a wheat wholemeal bread (Tanok), dephytinized Tanok, and cellulose was determined at pH 5.0 to 7.5. Zinc binding by each was highly pH-dependent and reached a maximum at pH 6.5 to 7.5. Removal of phytate from Tanok did not reduce its binding capability. Wheat bran at pH 6.5 and 6.8 bound 72% of iron (0.5 microgram/ml of solution) and 82.5% of zinc (1.43 microgram/ml solution), respectively. Lignin and two of the hemicellulose fractions of wheat bran and high binding capabilities for zinc (85.6, 87.1, and 82.1%, respectively) whereas a third had a lower zinc-binding capability (38.7%). Binding of zinc to various celluloses and dextrans is also demonstrated. Formation of complexes of these metals with wheat fiber can explain, at least in part, the decreased availability of dietary iron and zinc in wholemeal wheat bread.

  6. Germinated wheat: Phytochemical composition and mixing characteristics

    Science.gov (United States)

    Germinated grain recently attracts interest due to its beneficial effect on human health. In this research, whole wheat flour samples obtained after three days and five days of germination were analyzed for biochemical components, mixing quality, and effects on human breast cancer cells. Germinati...

  7. The quest for celiac-safe wheat

    NARCIS (Netherlands)

    Broeck, van den H.C.

    2010-01-01

    Gluten proteins from wheat have the unique property to interact with each other and form a network in dough preparation. In this gluten network gas bubbles can be retained that are produced by yeast, which is added during dough preparation. The result is a voluminous, viscoelastic dough for bread ma

  8. INTERNATIONAL WHEAT PRICE TRANSMISSION AND CAP REFORM

    OpenAIRE

    Thompson, Stanley R.; Bohl, Martin T.

    1999-01-01

    We illustrate how CAP policy reforms influence the transmission of world prices to domestic markets. Monthly wheat price data in Germany are used to obtain price transmission elasticities. Correctly accounting for structural breaks and the time series properties of the data yield transmission elasticities that differ dramatically among policy regimes.

  9. TEXTURE OF COOKED SPELT WHEAT NOODLES

    Directory of Open Access Journals (Sweden)

    Magdaléna Lacko - Bartošová

    2013-02-01

    Full Text Available At present, there are limited and incomplete data on the ability of spelt to produce alimentary pasta of suitable quality. Noodles are traditional cereal-based food that is becoming increasingly popular worldwide because of its convenience, nutritional qualities, and palatability. It is generally accepted that texture is the main criterion for assessing overall quality of cooked noodles. We present selected indicators of noodle texture of three spelt cultivars – Oberkulmer Rotkorn, Rubiota and Franckenkorn grown in an ecological system at the locality of Dolna Malanta near Nitra. A texture analyzer TA.XT PLUS was used to determine cooked spelt wheat noodle firmness (N (AACC 66-50. The texture of cooked spelt wheat noodles was expressed also as elasticity (N and extensibility (mm. Statistical analysis showed significant influence of the variety and year of growing on the firmness, elasticity and extensibility of cooked noodles. The wholemeal spelt wheat noodles were characterized with lower cutting firmness than the flour noodles. Flour noodles were more tensile than wholemeal noodles. The best elasticity and extensibility of flour noodles was found in noodles prepared from Rubiota however from wholemeal noodles it was Oberkulmer Rotkorn. Spelt wheat is suitable for noodle production, however also here it is necessary to differentiate between varieties. According to achieved results, wholemeal noodles prepared from Oberkulmer Rotkorn can be recommended for noodle industry due to their consistent structure and better texture quality after cooking.

  10. Landrace groups of bread wheat, Triticum aestivum.

    NARCIS (Netherlands)

    Zeven, A.C.

    1986-01-01

    Bread wheat was introduced in the Old World some 8000 years ago. Owing to local specific natural and human selection a landrace spread over a large area fragmented into locally adapted landraces. These related landraces can be grouped again in a landrace group indicating their evolution from a commo

  11. Selection procedures for durable resistance in wheat.

    NARCIS (Netherlands)

    Beek, M.A.

    1988-01-01

    A wheat breeding programme for durable resistance to all locally important pathogens: leaf rust, stem rust, powdery mildew, Septoria nodorum, Septoria tritici, Cochliobolus sativus, Fusarium graminearum, Common Root Rot, Barley Yellow Dwarf Virus and Soil Borne Mosaic Virus was conducted in Brazil.

  12. Molecular genetic studies on irradiated wheat plants

    International Nuclear Information System (INIS)

    Composite genotype(octamer hybrid) was obtained from crossing among eight Egyptian hexaploid wheat cultivars differing in their tolerance to drought stress to produce a genotype, which can economize on the irrigation water requirements or can tolerate drought stress. Gamma irradiation with 10-Krad was used to induce mutations, which could improve drought tolerance for this composite. From eight Egyptian wheat cultivars, two were chosen as drought tolerant and drought sensitive genotypes (G-160 and Sk-61, respectively. They were evaluated along with their F1 and F2 for their relative drought tolerance for some yield-related traits. Bulked segregating analysis developed some RAPD and SSR markers with different primers, which were considered as molecular for drought tolerance in wheat. Hal 2-like gene was introduced into Egyptian wheat cultivar G-164 via micro projectile bombardment. Two putative transgenic plants were successfully detected by leaf painting with the herbicide basta. PCR/ Southern blotting analysis indicated the presence of both/either bar and/or Hal 2-like genes in the genomic background of the two transgenic plants

  13. Registration of ‘Coral’ Wheat

    Science.gov (United States)

    ‘Coral’ soft white winter wheat (Triticum aestivum L.) was developed by the Michigan Agricultural Experiment Station and released March 28, 2008, via an exclusive licensing agreement through Michigan State University (MSU) Technologies. Coral was selected from the cross MSU D3913 / MSU D0331 made i...

  14. Bioactive compounds in whole grain wheat

    NARCIS (Netherlands)

    Mateo Anson, N.

    2010-01-01

    Bread can be healthier! Consuming whole-grain foods can prevent cardiovascular diseases, type-2 diabetes and metabolic syndrome. This is due to bioactive compounds in whole grain, such as antioxidants and anti-inflammatory compounds. We found that the different fractions of a wheat grain vary much i

  15. Flowering time control in European winter wheat

    Directory of Open Access Journals (Sweden)

    Simon Martin Langer

    2014-10-01

    Full Text Available Flowering time is an important trait in wheat breeding as it affects adaptation and yield potential. The aim of this study was to investigate the genetic architecture of flowering time in European winter bread wheat cultivars. To this end a population of 410 winter wheat varieties was evaluated in multi-location field trials and genotyped by a genotyping-by-sequencing approach and candidate gene markers. Our analyses revealed that the photoperiod regulator Ppd-D1 is the major factor affecting flowering time in this germplasm set, explaining 58% of the genotypic variance. Copy number variation at the Ppd-B1 locus was present but explains only 3.2% and thus a comparably small proportion of genotypic variance. By contrast, the plant height loci Rht-B1 and Rht-D1 had no effect on flowering time. The genome-wide scan identified six QTL which each explain only a small proportion of genotypic variance and in addition we identified a number of epistatic QTL, also with small effects. Taken together, our results show that flowering time in European winter bread wheat cultivars is mainly controlled by Ppd-D1 while the fine tuning to local climatic conditions is achieved through Ppd-B1 copy number variation and a larger number of QTL with small effects.

  16. Nutraceutical and functional scenario of wheat straw.

    Science.gov (United States)

    Pasha, Imran; Saeed, Farhan; Waqas, Khalid; Anjum, Faqir Muhammad; Arshad, Muhammad Umair

    2013-01-01

    In the era of nutrition, much focus has been remunerated to functional and nutraceutical foodstuffs. The health endorsing potential of such provisions is attributed to affluent phytochemistry. These dynamic constituents have functional possessions that are imperative for cereal industry. The functional and nutraceutical significance of variety of foods is often accredited to their bioactive molecules. Numerous components have been considered but wheat straw and its diverse components are of prime consideration. In this comprehensive dissertation, efforts are directed to elaborate the functional and nutraceutical importance of wheat straw. Wheat straw is lignocellulosic materials including cellulose, hemicellulose and lignin. It hold various bioactive compounds such as policosanols, phytosterols, phenolics, and triterpenoids, having enormous nutraceutical properties like anti-allergenic, anti-artherogenic, anti-inflammatory, anti-microbial, antioxidant, anti-thrombotic, cardioprotective and vasodilatory effects, antiviral, and anticancer. These compounds are protecting against various ailments like hypercholesterolemia, intermittent claudication, benign prostatic hyperplasia and cardiovascular diseases. Additionally, wheat straw has demonstrated successfully, low cost, renewable, versatile, widely distributed, easily available source for the production of biogas, bioethanol, and biohydrogen in biorefineries to enhance the overall effectiveness of biomass consumption in protected and eco-friendly environment. Furthermore, its role in enhancing the quality and extending the shelf life of bakery products through reducing the progression of staling and retrogradation is limelight of the article.

  17. Specific patterns of gene space organisation revealed in wheat by using the combination of barley and wheat genomic resources

    Directory of Open Access Journals (Sweden)

    Waugh Robbie

    2010-12-01

    Full Text Available Abstract Background Because of its size, allohexaploid nature and high repeat content, the wheat genome has always been perceived as too complex for efficient molecular studies. We recently constructed the first physical map of a wheat chromosome (3B. However gene mapping is still laborious in wheat because of high redundancy between the three homoeologous genomes. In contrast, in the closely related diploid species, barley, numerous gene-based markers have been developed. This study aims at combining the unique genomic resources developed in wheat and barley to decipher the organisation of gene space on wheat chromosome 3B. Results Three dimensional pools of the minimal tiling path of wheat chromosome 3B physical map were hybridised to a barley Agilent 15K expression microarray. This led to the fine mapping of 738 barley orthologous genes on wheat chromosome 3B. In addition, comparative analyses revealed that 68% of the genes identified were syntenic between the wheat chromosome 3B and barley chromosome 3 H and 59% between wheat chromosome 3B and rice chromosome 1, together with some wheat-specific rearrangements. Finally, it indicated an increasing gradient of gene density from the centromere to the telomeres positively correlated with the number of genes clustered in islands on wheat chromosome 3B. Conclusion Our study shows that novel structural genomics resources now available in wheat and barley can be combined efficiently to overcome specific problems of genetic anchoring of physical contigs in wheat and to perform high-resolution comparative analyses with rice for deciphering the organisation of the wheat gene space.

  18. Neutron activation analysis of wheat samples

    Energy Technology Data Exchange (ETDEWEB)

    Galinha, C. [CERENA-IST, Technical University of Lisbon, Av. Rovisco Pais 1, 1049-001 Lisboa (Portugal); Instituto Tecnoclogico e Nuclear, URSN, E.N. 10, 2686-953 Sacavem (Portugal); Anawar, H.M. [Instituto Tecnoclogico e Nuclear, URSN, E.N. 10, 2686-953 Sacavem (Portugal); Freitas, M.C., E-mail: cfreitas@itn.pt [Instituto Tecnoclogico e Nuclear, URSN, E.N. 10, 2686-953 Sacavem (Portugal); Pacheco, A.M.G. [CERENA-IST, Technical University of Lisbon, Av. Rovisco Pais 1, 1049-001 Lisboa (Portugal); Almeida-Silva, M. [Instituto Tecnoclogico e Nuclear, URSN, E.N. 10, 2686-953 Sacavem (Portugal); Coutinho, J.; Macas, B.; Almeida, A.S. [INRB/INIA-Elvas, National Institute of Biological Resources, Est. Gil Vaz, 7350-228 Elvas (Portugal)

    2011-11-15

    The deficiency of essential micronutrients and excess of toxic metals in cereals, an important food items for human nutrition, can cause public health risk. Therefore, before their consumption and adoption of soil supplementation, concentrations of essential micronutrients and metals in cereals should be monitored. This study collected soil and two varieties of wheat samples-Triticum aestivum L. (Jordao/bread wheat), and Triticum durum L. (Marialva/durum wheat) from Elvas area, Portugal and analyzed concentrations of As, Cr, Co, Fe, K, Na, Rb and Zn using Instrumental Neutron Activation Analysis (INAA) to focus on the risk of adverse public health issues. The low variability and moderate concentrations of metals in soils indicated a lower significant effect of environmental input on metal concentrations in agricultural soils. The Cr and Fe concentrations in soils that ranged from 93-117 and 26,400-31,300 mg/kg, respectively, were relatively high, but Zn concentration was very low (below detection limit <22 mg/kg) indicating that soils should be supplemented with Zn during cultivation. The concentrations of metals in roots and straw of both varieties of wheat decreased in the order of K>Fe>Na>Zn>Cr>Rb>As>Co. Concentrations of As, Co and Cr in root, straw and spike of both varieties were higher than the permissible limits with exception of a few samples. The concentrations of Zn in root, straw and spike were relatively low (4-30 mg/kg) indicating the deficiency of an essential micronutrient Zn in wheat cultivated in Portugal. The elemental transfer from soil to plant decreases with increasing growth of the plant. The concentrations of various metals in different parts of wheat followed the order: Root>Straw>Spike. A few root, straw and spike samples showed enrichment of metals, but the majority of the samples showed no enrichment. Potassium is enriched in all samples of root, straw and spike for both varieties of wheat. Relatively to the seed used for cultivation

  19. Structural features of reconstituted wheat wax films.

    Science.gov (United States)

    Pambou, Elias; Li, Zongyi; Campana, Mario; Hughes, Arwel; Clifton, Luke; Gutfreund, Philipp; Foundling, Jill; Bell, Gordon; Lu, Jian R

    2016-07-01

    Cuticular waxes are essential for the well-being of all plants, from controlling the transport of water and nutrients across the plant surface to protecting them against external environmental attacks. Despite their significance, our current understanding regarding the structure and function of the wax film is limited. In this work, we have formed representative reconstituted wax film models of controlled thicknesses that facilitated an ex vivo study of plant cuticular wax film properties by neutron reflection (NR). Triticum aestivum L. (wheat) waxes were extracted from two different wheat straw samples, using two distinct extraction methods. Waxes extracted from harvested field-grown wheat straw using supercritical CO2 are compared with waxes extracted from laboratory-grown wheat straw via wax dissolution by chloroform rinsing. Wax films were produced by spin-coating the two extracts onto silicon substrates. Atomic force microscopy and cryo-scanning electron microscopy imaging revealed that the two reconstituted wax film models are ultrathin and porous with characteristic nanoscale extrusions on the outer surface, mimicking the structure of epicuticular waxes found upon adaxial wheat leaf surfaces. On the basis of solid-liquid and solid-air NR and ellipsometric measurements, these wax films could be modelled into two representative layers, with the diffuse underlying layer fitted with thicknesses ranging from approximately 65 to 70 Å, whereas the surface extrusion region reached heights exceeding 200 Å. Moisture-controlled NR measurements indicated that water penetrated extensively into the wax films measured under saturated humidity and under water, causing them to hydrate and swell significantly. These studies have thus provided a useful structural basis that underlies the function of the epicuticular waxes in controlling the water transport of crops.

  20. Organic Wheat Farming Improves Grain Zinc Concentration.

    Science.gov (United States)

    Helfenstein, Julian; Müller, Isabel; Grüter, Roman; Bhullar, Gurbir; Mandloi, Lokendra; Papritz, Andreas; Siegrist, Michael; Schulin, Rainer; Frossard, Emmanuel

    2016-01-01

    Zinc (Zn) nutrition is of key relevance in India, as a large fraction of the population suffers from Zn malnutrition and many soils contain little plant available Zn. In this study we compared organic and conventional wheat cropping systems with respect to DTPA (diethylene triamine pentaacetic acid)-extractable Zn as a proxy for plant available Zn, yield, and grain Zn concentration. We analyzed soil and wheat grain samples from 30 organic and 30 conventional farms in Madhya Pradesh (central India), and conducted farmer interviews to elucidate sociological and management variables. Total and DTPA-extractable soil Zn concentrations and grain yield (3400 kg ha-1) did not differ between the two farming systems, but with 32 and 28 mg kg-1 respectively, grain Zn concentrations were higher on organic than conventional farms (t = -2.2, p = 0.03). Furthermore, multiple linear regression analyses revealed that (a) total soil zinc and sulfur concentrations were the best predictors of DTPA-extractable soil Zn, (b) Olsen phosphate taken as a proxy for available soil phosphorus, exchangeable soil potassium, harvest date, training of farmers in nutrient management, and soil silt content were the best predictors of yield, and (c) yield, Olsen phosphate, grain nitrogen, farmyard manure availability, and the type of cropping system were the best predictors of grain Zn concentration. Results suggested that organic wheat contained more Zn despite same yield level due to higher nutrient efficiency. Higher nutrient efficiency was also seen in organic wheat for P, N and S. The study thus suggests that appropriate farm management can lead to competitive yield and improved Zn concentration in wheat grains on organic farms. PMID:27537548

  1. Research Status Quo and Future of Low Temperature Wheat Genotypes

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Low temperature wheat genotypes are a group of wheat with a slightly low canopy (plant) temperature, and the research on their biological characters and utilization in wheat breeding has been done at home and abroad for more than 20 years, and has made great progress. The research contents and advances include the following respects: Wheat genotypes with slightly low canopy temperature have been verified to exist in nature; these wheat genotypes, which present cold temperature, are superior to conventional wheat materials in some important biological characters and particularly prominently in metabolic function and cellular structure; when they suffer stresses such as drought, high temperature and overcast and rainy weather, they still retain their superiority in some of their important biological characters and therefore have a wide range of ecological adaptability; slightly low canopy temperatures of these genotypes are closely correlated with low temperatures of their second heat sources and their vigorous plants; since their low canopy temperatures can be inherited, they can exert favorable influence on the temperatures of their offspring while crossing with other wheat materials, and in particular, the discovery of cold-source wheat as a contributor to low temperature, has further formed good conditions for breeding high and stable quality low temperature wheat varieties with a high and stable yield. Thus, low temperature wheat genotypes are of great research importance and have great prospects.

  2. Molecular Characteristics of New Wheat Starch and Its Digestion Behaviours

    Institute of Scientific and Technical Information of China (English)

    ZHOU Zhong-kai; HUA Ze-tian; YANG Yan; ZHENG Pai-yun; ZHANG Yan; CHEN Xiao-shan

    2014-01-01

    In order to understand the effect of starch molecular characteristics on the gel structure, which subsequently inlfuence the gel digestion behaviours, three wheat starches, control (conventional wheat starch), two new wheat cultivars with different genetic backgrounds (by knocking out SBE IIb and SBE IIa, respectively) were used in this study. In comparison with control, slight differences in the morphology of the starch granules of new wheat 1 were observed, whereas the starch granules of new wheat 2 had irregular shapes both for A-type granules and B-type granules. Starch molecular weight size was determined by SE-HPLC, and the results indicate that there was a subtle increase in the amylose content in the starch of new wheat 1 compared to that of control. The starch of new wheat 2 had the highest amylose content, and the molecular weight (MW) of its amylopectin was the lowest among the three starches. Fourier transform infrared spectroscopy (FTIR) was employed to investigate starch gel structure and the results suggest that the molecules of starch gel from new wheat 2 are more likely to re-associate to form an organized conformation. The digestion behaviours of the three starch gels were measured using a mixture of pancreatinα-amylase and amyloglucosidase. The results indicated that the starch gels of control and new wheat 1 had very high digestibility of 91.7 and 91.9%, respectively, whereas the digestibility of wheat 2 starch gel was only 36.2%. In comparison with the digestion curve patterns of control and new wheat 1 starch gels, the new wheat 2 exhibited a much lower initial velocity. These results indicated that the molecules in the starch of new wheat 2 are more readily to re-associate to form an organized structure during gel formation because of its unique molecular characteristics.

  3. Research on the Expression of Hemolysin Genes of Leptospira in vivo by Genechip%基因芯片技术对赖型钩端螺旋体溶血素基因体内诱导差异表达的研究

    Institute of Scientific and Technical Information of China (English)

    赵辉; 鲍朗

    2012-01-01

    目的 探讨经宿主体内环境诱导前后赖型钩端螺旋体溶血素致病基因表达的差异.方法 以赖型钩端螺旋体56601株的染色体DNA为模板,PCR扩增出溶血素基因片段为探针,并通过VersArray Chipwriter系统构建基因芯片.提取感染宿主前后钩端螺旋体RNA,逆转录为cDNA,用随机引物PCR扩增,以HEX和CY5双色荧光标记并与基因芯片进行杂交,使用Genepix 4000B扫描仪扫描芯片,通过检测芯片上的荧光信号比值来研究钩端螺旋体溶血素基因在宿主体内的表达情况.结果 成功构建赖型钩端螺旋体56601株溶血素基因芯片,芯片检测发现在宿主感染后钩体溶血素基因LA1029(Ratio=0.65)、LA1027(Ratio=0.53)具有明显上调表达(Ratio<0.67);LA3540(Ratio= 1.88)、IA3937(Ratio=5.58)、LA1029(Ratio= 3.00)在宿主肝脏中的表达比在血液中有明显增高(Ratio> 1.5),而LA4004的表达在宿主肝脏中要明显低于血液中(Ratio=0.67);LA3937(Ratio= 2.28)和LA1029 (Ratio= 2.20)在宿主肾脏中的表达要明显高于血液中(Ratio>1.5).结论 钩体溶血素基因的体内外表达和不同器官间的表达存在差异,这些差异表达的溶血素基因及产物在钩体病的致病中可能起重要的作用.%Objective To explore the expression of hemolysin genes of Leptospira in infected host. Methods Amplified the gene segment of hemolysin genes from the genome of Leptospira by PCR for gene probe. Manufacture genechip by the VersArray Chipwriter systerm. The total RNAs of Leptospira before and after infection host were extracted, reversely transcribed to cDNA, after the random PCR, the products were marked with HEX and CY5 respectively, and hybridized to genechip to demonstrate the expression of hemolysin genes of Leptospira. Results The hemolysin genes LA1029 (Ratio=0. 65),LA1027 (Ratio=0.53) were up-regulated after infection of host;LA3540 (Ratio=1.88), LA3937 (Ratio=5. 58), LA1029 (Ratio = 3. 00) were up

  4. Irradiation-Induced Wheat-Alien Translocation Lines and their Application in Wheat Breeding

    International Nuclear Information System (INIS)

    Wild relatives are rich gene resources for wheat improvement. Transfer of useful alien genes to wheat through development of wheat-alien translocations, especially small alien segment translocations, is important for wheat breeding. Wheat-alien genetic stocks such as amphiploid, addition or substitution lines were irradiated for translocation induction. Mature male or female gametes before flowering on the spikes were irradiated by 60Co-Gamma-rays at doses ranging from 800 to 2240 rad. Chromosome C-banding and genomic in situ hybridization (GISH) was used to identify chromosome translocation. Backcross of M1 plants using normal fresh pollen of common wheat was employed to enhance the transmission rate of various structural changes in their progenies. The results showed that a dose of 800∼1200 rad was suitable for pollen irradiation while 1500∼2000 rad was suitable for female-gamete irradiation. Irradiation treatment just before gamete maturation is advantageous to acquire more M1 hybrids with a high frequency of chromosome structural variation. The frequency of plants with at least one translocation chromosome in M1 could be increased up to 70% through pollen irradiation of Triticum durum-Haynaldia villosa amphiploid. More than 100 translocated chromosomes have been identified in the BC1 and BC2. Translocations with small alien chromosome segments, 57 terminal and 80 intercalary, were induced through female gamete irradiation conducted on T.aestivum-H.villosa 6VS/6AL translocation line. For the 2240 Rad dosage treatment, the induction frequencies of interstitial translocation, terminal translocation and deletion were 21.02%, 14.01%, and 14.65%, respectively, which were much higher than those previously reported. The T.aestivum-H.villosa 6VS/6AL translocation has been used in wheat breeding and many elite cultivars, such as Nannong 9918, Neimai 9, Shimai 14, etc. have been developed and released. (author)

  5. Causes for improvement in nutritive value of broiler chicken diets with whole wheat instead of ground wheat.

    Science.gov (United States)

    Svihus, B; Juvik, E; Hetland, H; Krogdahl, A

    2004-02-01

    1. Two experiments were conducted with broiler chicks to compare nutritive values of ground and whole wheat diets containing titanium oxide as indigestible marker. 2. In Experiment 1, a wheat and soy isolate based cold-pelleted diet, in which all the wheat was ground in a hammer mill to pass through a 3 mm sieve, was compared with a diet in which about half (375 g/kg) of the ground wheat was taken out of the diet and supplied as whole wheat mixed into the diet after pelleting. 3. In Experiment 2, a diet based on ground wheat and soy isolate which was pelleted after preconditioning (final temperature 81 degrees C) was compared with a diet in which 500 g of the ground wheat was replaced by whole wheat mixed into the diet before pelleting. 4. In Experiment 1, replacement of ground wheat with whole wheat increased apparent metabolisable energy (AME) content and starch digestibility measured at ileal as well as faecal level, while weight gain and feed conversion efficiency (FCE) were not affected. Jejunal chyme showed increased amylase activity and bile salt concentration. 5. In Experiment 2, replacement of ground wheat with whole wheat increased dry matter content as well as bile content of gizzard, and stimulated an increase in gizzard as well as pancreas weight. Jejunal amylase and bile concentrations were not significantly affected and neither were growth, FCE or AME. 6. Results from this experiment indicate that the improved feed value sometimes observed with whole wheat may be associated with modulation of digestive processes resulting in increased pancreas and liver secretions.

  6. Efficient detection of internal infestation in wheat based on biophotonics.

    Science.gov (United States)

    Shi, Weiya; Jiao, Keke; Liang, Yitao; Wang, Feng

    2016-02-01

    In the process of grain storage, there are many losses of grain quantity and quality for the sake of insects. As a result, it is necessary to find a rapid and economical method for detecting insects in the grain. The paper innovatively proposes a model of detecting internal infestation in wheat by combining pattern recognition and BioPhoton Analytical Technology (BPAT). In this model, the spontaneous ultraweak photons emitted from normal and insect-contaminated wheat are firstly measured respectively. Then, position, distribution and morphological characteristics can be extracted from the measuring data to construct wheat feature vector. Backpropagation (BP) neural network based on genetic algorithm is employed to take decision on whether wheat kernel has contaminated by insects. The experimental results show that the proposed model can differentiate the normal wheat from the insect-contaminated one at an average accuracy of 95%. The model can also offer a novel thought for detecting internal infestation in the wheat. PMID:26774558

  7. Proteomic Analysis of Wheat Seed in Response to Drought Stress

    Institute of Scientific and Technical Information of China (English)

    ZHANG Yu-feng; HUANG Xiu-wen; WANG Li-li; WEI Liu; WU Zhi-hui; YOU Ming-shan; LI Bao-yun

    2014-01-01

    Drought stress is one of the major factors affecting in wheat yield and grain quality. In order to investigate how drought stress might inlfuence wheat quality during grain iflling, three wheat cultivars Gaocheng 8901, Jagger and Nongda 3406 were subjected to drought stress during the grain iflling stage. Neither globulin and glutenin, nor the relative percentage of amylose signiifcantly changed following drought treatments, whereas albumin and gliadin concentrations did. The SDS-sedimentation, which has a strong linear correlation with wheat baking quality was markedly decreased following drought stress. These results indicated that drought had an adverse effect on wheat quality. In order to investigate the protein complexes in the wheat lfour, the data from native PAGE and SDS-PAGE were combined and a total of 14 spots were successfully identiifed, and of these eight protein types were determined to be potential complex forming proteins.

  8. Lipase inactivation in wheat germ by gamma irradiation

    International Nuclear Information System (INIS)

    An attempt was made to improve the shelf life of wheat germ by optimizing processing conditions involving γ-irradiation. Studies were carried out to investigate the effect of γ-irradiation (0–30 kGy doses) on the chemical composition of wheat germ with respect to variation in moisture, total ash, crude fat, free fatty acid, protein and lipase activity. The results demonstrate that shelf stability of wheat germ was achieved by inactivation of lipase at doses of γ-irradiation greater than 12 kGy. - Highlights: Ø γ-irradiation was found to inactivate Lipase present in Wheat Germ. Ø The treatment did not result in significant changes in Total Ash, Moisture and Protein Content of Wheat Germ. Ø The irradiation at 30 kGy resulted in 31.2 % inactivation of Lipase in Wheat Germ

  9. Investigation on Paste Property of Chinese Bread Wheat Varieties

    Institute of Scientific and Technical Information of China (English)

    YAN Jun; ZHANG Yong; HE Zhong-hu

    2002-01-01

    Starch viscosity is closely associated with noodle quality. RVA(rapid viscosity analyzer)was used to investigate the paste property of leading Chinese wheat varieties and 38 Australian wheat lines. Results showed that significant variability for RVA parameters was observed among Chinese wheat varieties, particularly among spring wheat varieties. In general, Australia wheat lines performed better paste characters than that of Chinese winter wheats. Genotype (G), environment (E) and genotype by environment (G × E) interaction affected all paste traits. Correlation analysis indicated that peak viscosity correlated highly and significantly with viscosity, breakdown, setback, final viscosity, peak time, and falling number(r = 0.56-0.93, P < 0.01 ). However breakdown was not significantly associated with most paste properties. Paste characters increased from low to high latitude both in the north and south part of Yellow and Huai Valley.

  10. Wheat flour based propionic acid fermentation: an economic approach.

    Science.gov (United States)

    Kagliwal, Lalit D; Survase, Shrikant A; Singhal, Rekha S; Granström, Tom

    2013-02-01

    A process for the fermentative production of propionic acid from whole wheat flour using starch and gluten as nutrients is presented. Hydrolysis of wheat flour starch using amylases was optimized. A batch fermentation of hydrolysate supplemented with various nitrogen sources using Propionibacterium acidipropionici NRRL B 3569 was performed. The maximum production of 48.61, 9.40, and 11.06 g of propionic acid, acetic acid and succinic acid, respectively, was found with wheat flour hydrolysate equivalent to 90 g/l glucose and supplemented with 15 g/l yeast extract. Further, replacement of yeast extract with wheat gluten hydrolysate showed utilization of gluten hydrolysate without compromising the yields and also improving the economics of the process. The process so developed could be useful for production of animal feed from whole wheat with in situ production of preservatives, and also suggest utilization of sprouted or germinated wheat for the production of organic acids. PMID:23357590

  11. Impact of Graze-­‐Out in Hard Red Winter Wheat Production

    OpenAIRE

    Neupane, Diwash; Moss, Charles B.

    2014-01-01

    We investigate the relationship between wheat graze-­‐out and cattle-­‐wheat price ratio and moisture level and examine the impact of graze-­‐out on wheat yield in major wheat-­‐producing states in US. Results indicate that cattle-­‐wheat price ratio and moisture level affect farmers’ graze out decision and graze-­‐out have significant impact on wheat yield.

  12. Is sequential feeding of whole wheat more efficient than ground wheat in laying hens?

    Science.gov (United States)

    Umar Faruk, M; Bouvarel, I; Mallet, S; Ali, M N; Tukur, H M; Nys, Y; Lescoat, P

    2011-02-01

    The impact of sequential feeding of whole or ground wheat on the performance of layer hen was investigated using ISABROWN hens from 19 to 42 weeks of age. In addition, the effect of reduced dietary energy content of a complete diet was also investigated. Four treatments were tested. Whole wheat was alternated with a protein-mineral concentrate (balancer diet) in a treatment (sequential whole wheat: SWW), while another treatment alternated ground wheat (sequential ground wheat: SGW) with the same balancer diet. The control (C) was fed a complete layer diet conventionally. Another treatment (low energy: LE) was fed a complete diet conventionally. The diet contained lower energy (10.7 v. 11.6 MJ/kg) compared to the C. Each treatment was allocated 16 cages and each cage contained five birds. Light was provided 16 h daily (0400 to 2000 h). Feed offered was controlled (121 g/bird per day) and distributed twice (2 × 60.5 g) at 4 and 11 h after lights on. In the sequential treatment, only wheat (whole or ground) was fed during the first distribution and the balancer diet during the second distribution. Left over feed was always removed before the next distribution. The total feed intake was not different between SWW and SGW, but the two were lower than C (P < 0.05). Wheat intake was however, lowered with SGW compared to SWW (P < 0.05). Egg production and egg mass (EM) were not different between treatments. Egg weight was lower with SGW than with SWW (P < 0.05), but the two were similar to C. Body weight (BW) was lowered (P < 0.01) with SGW relative to SWW and C, SWW BW being also lower than the C one. The efficiency of egg production was increased (P < 0.01) with the SWW and SGW relative to the control. Birds fed LE had higher feed intake (P < 0.05) but they had similar egg production and EM compared to the two sequential treatments. The efficiency of feed utilization was also reduced (P < 0.01) with LE compared to SWW and SGW. It was concluded that sequential feeding is

  13. Hybrid breeding in wheat: technologies to improve hybrid wheat seed production.

    Science.gov (United States)

    Whitford, Ryan; Fleury, Delphine; Reif, Jochen C; Garcia, Melissa; Okada, Takashi; Korzun, Viktor; Langridge, Peter

    2013-12-01

    Global food security demands the development and delivery of new technologies to increase and secure cereal production on finite arable land without increasing water and fertilizer use. There are several options for boosting wheat yields, but most offer only small yield increases. Wheat is an inbred plant, and hybrids hold the potential to deliver a major lift in yield and will open a wide range of new breeding opportunities. A series of technological advances are needed as a base for hybrid wheat programmes. These start with major changes in floral development and architecture to separate the sexes and force outcrossing. Male sterility provides the best method to block self-fertilization, and modifying the flower structure will enhance pollen access. The recent explosion in genomic resources and technologies provides new opportunities to overcome these limitations. This review outlines the problems with existing hybrid wheat breeding systems and explores molecular-based technologies that could improve the hybrid production system to reduce hybrid seed production costs, a prerequisite for a commercial hybrid wheat system.

  14. Antifungal properties of wheat histones (H1-H4) and purified wheat histone H1.

    Science.gov (United States)

    De Lucca, Anthony J; Heden, Lars-Olof; Ingber, Bruce; Bhatnagar, Deepak

    2011-07-13

    Wheat ( Triticum spp.) histones H1, H2, H3, and H4 were extracted, and H1 was further purified. The effect of these histones on specific fungi that may or may not be pathogenic to wheat was determined. These fungi included Aspergillus flavus , Aspergillus fumigatus , Aspergillus niger , Fusarium oxysporum , Fusarium verticillioides , Fusarium solani , Fusarium graminearum , Penicillium digitatum , Penicillium italicum , and Greeneria uvicola . Non-germinated and germinating conidia of these fungi were bioassayed separately. The non-germinated and germinating conidia of all Fusarium species were highly susceptible to the mixture (H1-H4) as well as pure H1, with viability losses of 99-100% found to be significant (p histone mixture and pure H1. F. graminearum was the most sensitive to histone activity. The histones were inactive against all of the non-germinated Penicillium spp. conidia. However, they significantly reduced the viability of the germinating conidia of the Penicillium spp. conidia, with 95% loss at 2.5 μM. Non-germinated and germinating conidia viability of the Aspergillus spp. and G. uvicola were unaffected when exposed to histones up to 10 μM. Results indicate that Fusarium spp. pathogenic to wheat are susceptible to wheat histones, indicating that these proteins may be a resistance mechanism in wheat against fungal infection.

  15. RAPD analysis of the genetic polymorphism in european wheat genotypes

    OpenAIRE

    Tímea Kuťka Hlozáková; Zdenka Gálová; Edita Gregová; Martin Vivodík; Želmíra Balážová; Dana Miháliková

    2016-01-01

    Wheat (Triticum aestivum L.) is one of the main crops for human nutrition. The genetic variability of grown wheat has been reduced by modern agronomic practices, which inturn prompted the importance of search for species that could be useful as a genepool for the improving of flour quality for human consumption or for other industrial uses. Therefore, the aim of this study was to analyze the genetic diversity among 24 European wheat genotypes based on Random Amplified Polymorphism (RAPD) mar...

  16. Alkali pretreated of wheat straw and its enzymatic hydrolysis

    OpenAIRE

    Lirong Han; Juntao Feng; Shuangxi Zhang; Zhiqing Ma; Yonghong Wang; Xing Zhang

    2012-01-01

    The efficiency of enzymatic hydrolysis of cellulose can be improved by various pretreatments of the substrate. In order to increase the efficiency of enzymatic saccharification of the wheat straw, we determined the effect of different pretreatments on the physical structure, chemical components and enzymatic saccharification of wheat straw. Our results showed that combination of grinding and sodium hydroxide (NaOH) treatment had high effect on the enzymatic hydrolysis of wheat straws. The opt...

  17. The Efficient Transformation of Wheat in Planta by Agrobacterium tumefaciens

    Institute of Scientific and Technical Information of China (English)

    HE Dao-yi; LI Zhong-cun; WANG Hong-gang

    2003-01-01

    Transformation of wheat was performed by pipetting spikelets with Agrobacterium tumefaciens which contained expression vectors using Npt Ⅱ as reporter gene. Transformants were identified through kanamycin resistance, PCR and Southern blot. The results showed that transformation efficiency was within 2.0 to 3. 2 % in all tested varieties of wheat. Then the simple and efficient protocol of wheat transformation by Agrobacterium tumefaciens in planta was primarily established.

  18. 21 CFR 139.180 - Wheat and soy noodle products.

    Science.gov (United States)

    2010-04-01

    ... 21 Food and Drugs 2 2010-04-01 2010-04-01 false Wheat and soy noodle products. 139.180 Section 139... and Noodle Products § 139.180 Wheat and soy noodle products. (a) Wheat and soy noodle products are the...), except that soy flour is added in a quantity not less than 12.5 percent of the combined weight of...

  19. Baking Quality of Winter Wheat Varieties in Organic Farming

    OpenAIRE

    KONVALINA, PETR; Moudry, Jan; Capouchova, Ivana

    2009-01-01

    The technological value of wheat is negatively influenced by organic methods of cultivation. The critical factor is the crude protein content and quality. The aim of this paper is to identify diferences in the quality of eight varieties and two strains of wheat recommended in conventional or organic conditions. Correlation analysis of the qualitative parameters of wheat shows a clear relationship between crude protein content, wet gluten content and Zeleny - sedimentation value. According to ...

  20. Spring Wheat Leaf Appearance and Temperature: Extending the Paradigm?

    OpenAIRE

    McMaster, Gregory S.; WILHELM, W. W.; PALIC, D. B.; Porter, John R.; Jamieson, P. D.

    2003-01-01

    Extensive research shows temperature to be the primary environmental factor controlling the phyllochron, or rate of leaf appearance, of wheat (Triticum aestivum L.). Experimental results suggest that soil temperature at crown depth, rather than air temperature above the canopy, would better predict wheat leaf appearance rates. To test this hypothesis, leaf appearance in spring wheat (‘Nordic’) was measured in a 2‐year field experiment (Nunn clay loam soil; fine, smectitic, mesic Aridic, Argiu...

  1. Chinese Rice Planting Technique Ensures Optimum Wheat Yield in Bangladesh

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    @@ Spring wheat is the second option of cereal crop to feed the growing population in Bangladesh. This crop can yield more than 5.0 ton ha-1 with optimum management on 6.1 million ha of land - 2.6 million ha with irrigation and 3.5 million ha without irrigation. However, the present average wheat yield is near 1.5 ton ha-1, and only 10% of the potential area are under wheat cultivation for various reasons.

  2. Factors Influencing Wheat Yield and Variability: Evidence from Manitoba, Canada

    OpenAIRE

    Richard CAREW; Elwin G. Smith; Grant, Cynthia

    2009-01-01

    Production functions to explain regional wheat yields have not been studied extensively in the Canadian prairies. The objective of this study is to employ a Just-Pope production function to examine the relationship between fertilizer inputs, soil quality, biodiversity indicators, cultivars qualifying for Plant Breeders’ Rights (PBR), and climatic conditions on the mean and variance of spring wheat yields. Using regional-level wheat data from Manitoba, Canada, model results show nitrogen fer...

  3. RECYCLING OF CHEMICAL PULP FROM WHEAT STRAW AND CORN STOVER

    Directory of Open Access Journals (Sweden)

    James Barsness

    2007-11-01

    Full Text Available Handsheets produced from corn stalks and wheat straw soda AQ pulps were recycled in the lab. Pulping of corn stalks resulted in a low pulp yield, low bonding strength, and low recyclability. Conversely, wheat straw fiber had a better yield, very good tensile properties, and showed a considerably better response to recycling. The tensile index of wheat straw fibers retained 67% of its original value after four cycles. It could be shown that recycling caused only small changes in chemical compo-sition, but that the crystallinity index increased considerably. To be able to understand the behavior of wheat straw fiber as part of a commercial papermaking furnish, a paper containing 20% wheat straw fiber was produced on a 24 inch pilot paper machine and was recycled using a handsheet mold with white water return. Chemical analysis of the control (no wheat fiber and the wheat-containing paper demonstrated slightly higher xylan content for the wheat-containing material. Recyclability increased slightly with addition of wheat fibers to a commercial furnish.

  4. Wheat trade - does Russia price discriminate across export destinations?

    OpenAIRE

    Pall, Zsombor; Perekhozhuk, Oleksandr; Teuber, Ramona; Glauben, Thomas

    2011-01-01

    Significant changes have taken place on the world wheat market over the last decade. Russia, a former net wheat importer has become a leading exporter with a world market share of 13.8 percent in 2009/2010. Though there are several studies on the pricing behaviour of Canadian and US wheat exporters, there is none on the pricing behaviour of Russian wheat exporters. The present paper tries to fill this lack of research by providing a quantitative analysis of the pricing behaviour of Russian wh...

  5. The Marketing Performance of Illinois and Kansas Wheat Farmers

    OpenAIRE

    Dietz, Sarah N.; Aulerich, Nicole M.; Irwin, Scott H.; Good, Darrel L.

    2009-01-01

    The purpose of this paper is to investigate the marketing performance of wheat farmers in Illinois and Kansas over 1982-2004. The results show that farmer benchmark prices for wheat in Illinois and Kansas fall in the middle-third of the price range about half to three-quarters of the time. Consistent with previous studies, this refutes the contention that Illinois and Kansas wheat farmers routinely market the bulk of their wheat crop in the bottom portion of the price range. Tests of the aver...

  6. Biolistic- and Agrobacterium-mediated transformation protocols for wheat.

    Science.gov (United States)

    Tamás-Nyitrai, Cecília; Jones, Huw D; Tamás, László

    2012-01-01

    After rice, wheat is considered to be the most important world food crop, and the demand for high-quality wheat flour is increasing. Although there are no GM varieties currently grown, wheat is an important target for biotechnology, and we anticipate that GM wheat will be commercially available in 10-15 years. In this chapter, we summarize the main features and challenges of wheat transformation and then describe detailed protocols for the production of transgenic wheat plants both by biolistic and Agrobacterium-mediated DNA-delivery. Although these methods are used mainly for bread wheat (Triticum aestivum L.), they can also be successfully applied, with slight modifications, to tetraploid durum wheat (T. turgidum L. var. durum). The appropriate size and developmental stage of explants (immature embryo-derived scutella), the conditions to produce embryogenic callus tissues, and the methods to regenerate transgenic plants under increasing selection pressure are provided in the protocol. To illustrate the application of herbicide selection system, we have chosen to describe the use of the plasmid pAHC25 for biolistic transformation, while for Agrobacterium-mediated transformation the binary vector pAL156 (incorporating both the bar gene and the uidA gene) has been chosen. Beside the step-by-step methodology for obtaining stably transformed and normal fertile plants, procedures for screening and testing transgenic wheat plants are also discussed.

  7. Evaluation of trends in wheat yield models

    Science.gov (United States)

    Ferguson, M. C.

    1982-01-01

    Trend terms in models for wheat yield in the U.S. Great Plains for the years 1932 to 1976 are evaluated. The subset of meteorological variables yielding the largest adjusted R(2) is selected using the method of leaps and bounds. Latent root regression is used to eliminate multicollinearities, and generalized ridge regression is used to introduce bias to provide stability in the data matrix. The regression model used provides for two trends in each of two models: a dependent model in which the trend line is piece-wise continuous, and an independent model in which the trend line is discontinuous at the year of the slope change. It was found that the trend lines best describing the wheat yields consisted of combinations of increasing, decreasing, and constant trend: four combinations for the dependent model and seven for the independent model.

  8. Production of Protease Enzyme from Wheat Straw

    Directory of Open Access Journals (Sweden)

    Mohammed A. Atiya

    2008-01-01

    Full Text Available Protease enzyme production was studied and optimized as a first step to collect information about solid state fermenter to produce protease enzyme. A local isolated Aspergillus niger was used for this study with constant spores feeding in every experiment at (105/g. Experiments carried out in conical flasks with (250 ml containing (10 g of wheat straw as a substrate with different conditions included temperature, pH, hydration ratio, and fermentation time, the results comprised by measuring protease activity (u. The results showed that the best activity can be obtained at (T = 32°C, t= 100 hrs, pH= 2.5 and hydration ratio is 1:3. On the other hand the results is courage to proceed to design a solid state protease fermenter from wheat straw.

  9. Antioxidant activity of wheat and buckwheat flours

    Directory of Open Access Journals (Sweden)

    Sedej Ivana J.

    2010-01-01

    Full Text Available Antioxidative activities of wheat flours (type 500 and wholegrain and buckwheat flours (light and wholegrain were tested using 1,1-diphenyl-2-picrylhydrazyl (DPPH·-scavenging activity, reducing power and chelating activity on Fe2+. Also, the content of the total phenolics of ethanolic extracts was estimated. Polyphenolics content (expressed as gallic acid equivalent, GAE in wheat flours varied between 37.1 and 137.2 μg GAE/g extract, while its content in buckwheat flour were at least four time higher and ranged between 476.3 and 618.9μg GAE/g extract. Ethanolic extracts of buckwheat flours exhibited higher antioxidant activities in all the assays, except for chelating activity. Regarding all the obtained results, it can be concluded that bakery products produced with buckwheat flour could be regarded as potential functional foods.

  10. A survey of wheat landraces in Oman

    OpenAIRE

    Alkhanjari, S.; Hammer, K; Bürkert, Andreas; Khan, I. (Imran); Al-Maskri, A.

    2005-01-01

    Little is known about the diversity of wheat (Triticum spp.) in Oman. Therefore, a survey was conducted in northern Oman to collect landraces of Triticum durum, T. aestivum and T. dicoccon for subsequent morphological characterization and investigations on stress adaptation. The results show that the cultivation of these landraces (the genetic composition of which remains to be studied in more detail) is done primarily by traditional farmers who preserve the inherited germplasm on often ti...

  11. Control of fungal diseases in winter wheat

    OpenAIRE

    Wiik, Lars

    2009-01-01

    The relationships between plant diseases, winter wheat characteristics, air temperature and precipitation, site factors and agricultural practices were investigated. Regression analyses revealed that control of LBDs (Leaf Blotch Diseases, including septoria tritici blotch, stagonospora nodorum blotch and tan spot) explained 74% of the yield increase achieved by fungicide treatment at GS 45-61, followed by powdery mildew (20%), brown rust (5%) and yellow rust (1%). Yield of both untreated and ...

  12. Production of Protease Enzyme from Wheat Straw

    OpenAIRE

    Mohammed A. Atiya

    2008-01-01

    Protease enzyme production was studied and optimized as a first step to collect information about solid state fermenter) to produce protease enzyme. A local isolated Aspergillus niger was used for this study with constant spores feeding in every experiment at (105/g). Experiments carried out in conical flasks with (250 ml) containing (10 g) of wheat straw as a substrate with different conditions included temperature, pH, hydration ratio, and fermentation time, the results comprised by measuri...

  13. Africa's Growing Dependence on Imported Wheat

    OpenAIRE

    Shah, Mahendra; Fischer, Gunther; Kromer, Gerhard; Parikh, Kirit

    1987-01-01

    Food production in many African countnes has in recent years not expanded fast enough to keep up with population growth. Dimimshmgself-sufficiency and food security and the consequent increase in food imports of many African countnes are causing great concern. Amongst all food items, wheat stands out as the one commodity whose influence in consumption seems to be growing rapidly This paper highlights the results of a detailed study investigating the underlying causes of past trends, estimatin...

  14. Modelling Indian Wheat and Rice Sector Policies

    OpenAIRE

    Kozicka, Marta; Kalkuhl, Matthias; Saini, Shweta; Brockhaus, Jan

    2015-01-01

    This paper serves to disentangle the complex system of Indian food policies related to wheat and rice procurement, storage, distribution and trade. Using nationally aggregated time series data, these policies are econometrically analysed. Based on the estimation results, their market implications are assessed. Eventually, different scenarios, including the implementation of the National Food Security Act, are simulated with respect to fiscal costs and public stocks.

  15. Genetic Resources for Disease Resistance in Wheat

    OpenAIRE

    Hysing, Shu-Chin

    2007-01-01

    Bread wheat is affected by many diseases that cause yield and quality losses. The incorporation of resistance genes is a user- and environmentally friendly method to manage disease. It is highly desirable that the resistance is durable and that the genes have a positive or no influence on agronomic performance. The characterization of genetic resources for resistance is a prerequisite for their utilization in plant breeding. The aim of the present thesis was to characterize resistance against...

  16. Drought Tolerance in Modern and Wild Wheat

    OpenAIRE

    Hikmet Budak; Melda Kantar; Kuaybe Yucebilgili Kurtoglu

    2013-01-01

    The genus Triticum includes bread (Triticum aestivum) and durum wheat (Triticum durum) and constitutes a major source for human food consumption. Drought is currently the leading threat on world's food supply, limiting crop yield, and is complicated since drought tolerance is a quantitative trait with a complex phenotype affected by the plant's developmental stage. Drought tolerance is crucial to stabilize and increase food production since domestication has limited the genetic diversity of c...

  17. Drought Resistance in Bread Wheat Genotypes

    OpenAIRE

    ÖZTÜRK, Ali

    1998-01-01

    Development of drought-resistant cultivars is one of the major goals in plant breeding programs. Twentysix wheat genotypes were evaluated for drought resistance using the criteria of leaf relative water content (LRWC), leaf relative water loss (LRWL) and drought susceptibility index (DSI) under Erzurum conditions in the crop seasons of 1995-96 and 1996-97. The results showed that differences among the genotypes in LRWC, LRWL and DSI were significant. In rainfed condition; LRWC, LRWL and DSI ...

  18. Transgenic Wheat, Barley and Oats: Future Prospects

    Science.gov (United States)

    Dunwell, Jim M.

    Following the success of transgenic maize and rice, methods have now been developed for the efficient introduction of genes into wheat, barley and oats. This review summarizes the present position in relation to these three species, and also uses information from field trial databases and the patent literature to assess the future trends in the exploitation of transgenic material. This analysis includes agronomic traits and also discusses opportunities in expanding areas such as biofuels and biopharming.

  19. Photosynthetic acclimation to high temperatures in wheat

    OpenAIRE

    Sayed, O. H.

    1992-01-01

    Growth and photosynthetic performance were assessed for the Finnish wheat Triticum aestivum L. var. APU under a cool (13/10�C day/night) and a warm (30/25�C day/night) regime. Plants exhibited a certain degree of acclimation to warm growth conditions. This acclimation appeared to involve enhanced performance of both photosystem II and whole-chain electron transport. Enhanced thermal stability of photophosphorylation was also observed in warm-grown plants.

  20. Winter Wheat Row Spacing and Alternative Crop Effects on Relay-Intercrop, Double-Crop, and Wheat Yields

    OpenAIRE

    Leah Sandler; Kelly A. Nelson; Christopher Dudenhoeffer

    2015-01-01

    In Missouri as well as much of the Midwest, the most popular double-cropping system was winter wheat (Triticum aestivum L.) followed by soybean (Glycine max (L.) Merr). These two crops can also be used in an intercrop system, but optimal row spacing was important to increase crop productivity. Research was conducted to evaluate (1) winter wheat inter- and double-crop production systems, using a variety of alternative crops, and (2) the impact of different wheat row spacings on intercrop estab...

  1. Evidence of isolate-specificity in non-hypersensitive resistance in spring wheat (Triticum aestivum) to wheat leaf rust

    OpenAIRE

    Qamar, Maqsood; Niks, R. E.

    2007-01-01

    Isolate-specific aspect of non-hypersensitive resistance in wheat to wheat leaf rust was studied at seedling stage in the green house. Isolate-specific response of non-hypersensitive resistance was assessed from latency period (LP) and infection frequency (IF) of two single-pustule isolates of Puccinia triticina in 26 spring wheat cultivars/lines. Small but significant cultivar x isolate interactions were observed for LP and IF in seedlings of host genotypes. Isolate specific effect for LP at...

  2. Response of Durum Wheat Seedlings to Salinity

    Directory of Open Access Journals (Sweden)

    Mehmet YILDIRIM

    2015-04-01

    Full Text Available Salinity is an important source of abiotic stress, limiting crop performance in most arid and semi-arid areas of the world. This research was conducted to determine the effects of salinity on physiological parameters of durum wheat (Triticum durum Desf. genotypes. The research was conducted in the tissue culture laboratory at the Agriculture Faculty of Dicle University. The study consisted of one durum wheat commercial cultivar, five local cultivars and four advanced genotypes. There were three replications in a split-plot experimental design. Genotypes were germinated in four NaCl concentrations (0, 50, 100, 150 mM in plastic boxes. There were statistically assured significant differences among the genotypes for all salt concentrations and all observed parameters (coleoptile length, seedling length, root length, seedling fresh weight, root fresh weight, seedling dry weight, root dry weight, germination rate and seedling vigor. There was significant decrease in all examined parameters depending on the increase of salt concentration. The ‘Sorgul’ genotype was most tolerant to salinity, in terms of root length and root dry weight, whereas ‘Altintoprak 98’ was most tolerant as measured by the impact of salinity on coleoptile length, seedling fresh weight, germination rate and seedling vigour. The ‘Beyaziye’ genotype was the most sensitive to salinity-induced stress. The results from this study demonstrated differences among durum wheat genotypes for seedling parameters measured in the presence of salinity stress.

  3. Free radical kinetics of irradiated durum wheat

    Science.gov (United States)

    Korkmaz, M.; Polat, M.

    2000-04-01

    In the present work, a detailed ESR investigation of characteristic features and kinetic behaviors at three different temperatures of free radicals produced in a species of durum wheat cultivated in Turkey and irradiated at doses of up to 5 kGy by a γ source, is reported. Unirradiated wheat samples exhibit a weak, single-line ESR signal originating from a radical of unknown structure called radical III in this work. Irradiation produces two more radicals identified as hydroxyalkyl (I) and aldehydalkyl (II) radicals beside radical III. The radicals (I, II and III) follow complicated kinetics. Species I and II initially decay very fast after the irradiation followed by slower decay. Radical half-life times depend on whether they were induced in the crystalline or amorphous fractions of the wheat starch. Activation energy values of the radicals were found to follow the order Ea(III)> Ea(II)> Ea(I). ESR parameters of the radical species were determined by simulating experimental spectra recorded following the irradiation. Room temperature dose-response curves and variations of different spectral parameters between 120 and 390 K were also studied.

  4. STUDY OF WHEAT PROTEIN DEGRADATION DURING GERMINATION

    Directory of Open Access Journals (Sweden)

    Eva Michalcová

    2012-06-01

    Full Text Available Glutens, the storage proteins of cereals, play significant role in technological and nutraceutical quality of cereal grains. Whereas the high content of glutens allows making better structure of dough, consummation of foods with high gluten content can cause digestive problems. In our work, we studied ability of wheat proteases to degrade proteins, especially glutens. Wheat grains were germinated for up to seven days at three different temperatures 15, 20, 30 °C and pH 3.0, 4.0, 5.5, 7.0, 8.0. Proteins were fractionated into salt-soluble albumins and globulins, alcohol-soluble gliadins and base-soluble glutenins. In these fractions, protein content and their composition were analyzed by Bradford method and SDS-PAGE (sodium dodecyl sulfate polyacrylamide gel electrophoresis. The results showed that remarkable degradation of glutens started after three days and the lowest concentration was measured at the seventh day of germination of wheat grain at temperature 20 °C, pH 5.5.

  5. [Effects of wheat planted adjacent to rape on the major pests and their natural enemies in wheat field].

    Science.gov (United States)

    Li, Chuan; Wu, Wen-Qing; Zhu, Liang; Zhang, Qing-Wen; Liu, Xiao-Xia

    2011-12-01

    Based on the dynamic analysis of insect community structure characteristics, an investigation was conducted on the composition, abundance, and stability of wheat aphids and their major natural enemies in the wheat field adjacent to rape field in Handan City, Hebei Province in 2008-2009. The wheat and rape fields had the similar composition of insect communities. The main pests were aphids, their predatory natural enemies included ladybirds, green lacewings, spiders, and hover flies, and their parasitic natural enemies were wasps. In 2008-2009, the composition of insect communities in the wheat and rape fields had definite changes, but the common features were the lowest abundance of aphids and the highest abundance of predatory and parasitic natural enemies in wheat field adjacent to rape field. The insect community, aphid sub-community, and predatory natural enemy' s sub-community had a high stability in the wheat field adjacent to rape field and a low stability far from the rape field, suggesting that planting wheat adjacent to rape could effectively protect and make use of the natural enemies and promote their control ability on wheat aphids in wheat field.

  6. Irradiation induced wheat-alien translocation lines and their application in wheat breeding

    International Nuclear Information System (INIS)

    Wild relatives are rich gene resources for wheat improvement. Transfer of alien useful genes to wheat through development of wheat-alien translocations, especially small alien segment translocations, is important for wheat breeding. Wheat-alien genetic stocks such as amphiploid, addition or substitution lines were irradiated for translocation induction. Mature male or female gametes before flowering on the spikes were irradiated by 60Co-γ-rays at doses ranged from 8 to 22.4Gy. Chromosome C-banding and genomic in situ hybridization (GISH) were used to identify chromosome translocation. Backcross of M1 plants using normal fresh pollen of common wheat was employed to enhance the transmission rate of various structural changes in their progenies. The results showed that the dose of 8∼12Gy was suitable for pollen irradiation while 15∼20Gy was suitable for female-gamete irradiation. Irradiation treatment just before gamete maturation is advantageous to acquisition of more M1 hybrids with high frequency of chromosome structural variation. The frequency of plants with at least one translocation chromosome in M1 could be increased up to 70% through pollen irradiation of Triticum durum-Haynaldia villosa amphiploid. More than one hundred translocated chromosomes have been identified in the BC1 and BC2. 57 terminal and 80 intercalary translocations with small alien chromosome segments were induced through female-gamete irradiation conducted on T.aestivum-H.villosa 6VS/6AL translocation line. For the 22.4Gy dosage treatment, the induction frequencies of interstitial translocation, terminal translocation and deletion were 21.02%, 14.01%, and 14.65%, respectively, which were much higher than that previously reported. These genetic stocks will be useful for physical mapping of alien genes such as Pm21. Some compensate translocations conveying useful agronomic traits would be useful in wheat breeding. The T.aestivum-H.villosa 6VS/6AL translocation has been used in wheat

  7. Ridge Regression: A tool to forecast wheat area and production

    Directory of Open Access Journals (Sweden)

    Nasir Jamal

    2007-07-01

    Full Text Available This research study is designed to develop forecasting models for acreage and production of wheat crop for Chakwal district of Rawalpindi region keeping in view the assumptions of OLS estimation. The forecasting models are developed on the basis of 15 years data from 1984-85 to 1998-99 then wheat area and production for next five years from 1999-2000 to 2003-04 is forecasted through the models and compared with the actual figures. After evaluating the accuracy of the models, final models are developed on the basis of 20 years data for the period 1984-85 to 2003-04. These linear models can be used to forecast wheat area and production of next five years. The Urea fertilizer, DAP fertilizer and manures plays a significant role to enhance the production of wheat crop. Number of ploughs in the wheat fields is significant factor to increase the production of wheat crop. Good rains in the month of October and November significantly contributes to increase the production of wheat crop and mean maximum temperature in the month of March is a significant factor to reduce the production of wheat crop.

  8. Evaluation of preformance of Predictive Models for Deoxynivalenol in Wheat

    NARCIS (Netherlands)

    Fels, van der H.J.

    2014-01-01

    The aim of this study was to evaluate the performance of two predictive models for deoxynivalenol contamination of wheat at harvest in the Netherlands, including the use of weather forecast data and external model validation. Data were collected in a different year and from different wheat fields th

  9. 77 FR 25375 - United States Standards for Wheat

    Science.gov (United States)

    2012-04-30

    ...-AB12 United States Standards for Wheat Correction PART 810 In proposed rule document 2012-9182... 4.0 8.0 12.0 20.0 Total \\1\\ 3.0 5.0 8.0 12.0 20.0 Wheat of other classes: \\2\\ Contrasting classes...

  10. Bioconversion of lime pretreated wheat straw to fuel ethanol

    Science.gov (United States)

    Lime pretreatment and enzymatic saccharification methods were evaluated for conversion of wheat straw cellulose and hemicellulose to fermentable sugars. The maximum yield of monomeric sugars from wheat straw (8.6%, w/v) by lime pretreatment (100 mg/g straw, 121 deg C, 1 h) and enzymatic hydrolysis ...

  11. Zinc biofortification of cereals: rice differs from wheat and barley

    NARCIS (Netherlands)

    Stomph, T.J.; Jiang, W.; Struik, P.C.

    2009-01-01

    In their review, mainly focused on bread wheat (Triticum aestivum), durum wheat (Triticum durum) and barley (Hordeum vulgare), Palmgren et al. 1 M.G. Palmgren et al., Zinc biofortification of cereals: problems and solutions, Trends Plant Sci. 13 (2008), pp. 464–473. Article | PDF (905 K) | View Reco

  12. EPIDEMIOLOGY AND CONTROL OF STRIPE RUST ON WHEAT

    Science.gov (United States)

    Stripe rust of wheat, caused by Puccinia striiformis f. sp. tritici, is one of the most important diseases of wheat worldwide. This review presents basic and recent information on stripe rust epidemiology, pathogen virulence changes and population structure, and movement of the pathogen in the Unit...

  13. Origins of the poor filtration characteristics of wheat starch hydrolysates

    NARCIS (Netherlands)

    Matser, A.M.; Steeneken, P.A.M.

    1998-01-01

    The effects of wheat starch components on the filtration characteristics of wheat starch hydrolysates were investigated with a model-based approach. The filtration rate was not affected by the removal of the pentosans or by altering the conformation of the protein. On the other hand, the filtration

  14. Alien Introgression for FHB Resistance in Wheat - Challenges and Strategies

    Science.gov (United States)

    Over one thousand accessions of wheat relatives at different ploidy levels and wheat-alien species derivatives with varied chromosome constitutions were evaluated for Fusarium head blight (FHB) resistance. FHB resistance identified from the relatives and derivatives were introgressed into adapted br...

  15. Segregation of Soft White Wheat by Density for Improved Quality

    Science.gov (United States)

    Buyers of wheat desire grain that is high quality and performs consistently. Grain quality is dependant on many factors and can vary significantly not only within a given field, but also within an individual head of wheat. This research was conducted to determine if grain of varying quality could ...

  16. A whole-genome, radiation hybrid map of wheat

    Science.gov (United States)

    Generating a reference sequence of bread wheat (Triticum aestivum L.) is a challenging task because of its large, highly repetitive and allopolyploid genome. Ordering of BAC- and NGS-based contigs in ongoing wheat genome-sequencing projects primarily uses recombination and comparative genomics-base...

  17. Multi-wheat-model ensemble responses to interannual climate variability

    NARCIS (Netherlands)

    Ruane, Alex C.; Hudson, Nicholas I.; Asseng, Senthold; Camarrano, Davide; Ewert, Frank; Martre, Pierre; Boote, Kenneth J.; Thorburn, Peter J.; Aggarwal, Pramod K.; Angulo, Carlos; Basso, Bruno; Bertuzzi, Patrick; Biernath, Christian; Brisson, Nadine; Challinor, Andrew J.; Doltra, Jordi; Gayler, Sebastian; Goldberg, Richard; Grant, Robert F.; Heng, Lee; Hooker, Josh; Hunt, Leslie A.; Ingwersen, Joachim; Izaurralde, Roberto C.; Kersebaum, Kurt Christian; Kumar, Soora Naresh; Müller, Christoph; Nendel, Claas; O'Leary, Garry; Olesen, Jørgen E.; Osborne, Tom M.; Palosuo, Taru; Priesack, Eckart; Ripoche, Dominique; Rötter, Reimund P.; Semenov, Mikhail A.; Shcherbak, Iurii; Steduto, Pasquale; Stöckle, Claudio O.; Stratonovitch, Pierre; Streck, Thilo; Supit, Iwan; Tao, Fulu; Travasso, Maria; Waha, Katharina; Wallach, Daniel; White, Jeffrey W.; Wolf, Joost

    2016-01-01

    We compare 27 wheat models' yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981-2010 grain yield, and

  18. NUTRITIONAL AND BAKING QUALITY OF LOW PHYTIC ACID WHEAT

    Science.gov (United States)

    Phytic acid is the major storage form of phosphorus in wheat grain. Non-ruminant animals cannot utilize phytic acid phosphorus, and phytic acid reduces the nutritional availability of important minerals. We have identified a wheat mutant (Lpa1-1) with reduced phytic acid P and increased inorganic ...

  19. Quality Differences and Price Responsiveness of Wheat Class Demands

    OpenAIRE

    Wilson, William W.; Gallagher, Paul W.

    1990-01-01

    Price responsiveness and preferences for wheat classes are measured using a Case function specification. Results indicate there have been numerous changes in market shares of wheat classes from different exporters in specific markets. In general, quality differentials are important in some international markets; in others, relative prices are more important in determining market shares.

  20. 78 FR 27857 - United States Standards for Wheat

    Science.gov (United States)

    2013-05-13

    ... domestic and export marketing of wheat. Executive Order 12866 and Regulatory Flexibility Act The Office of... marketing of wheat. DATES: Effective Date: May 1, 2014. FOR FURTHER INFORMATION CONTACT: Patrick McCluskey..., GIPSA published an Advance Notice of Proposed Rulemaking (ANPR) in the Federal Register (74 FR...

  1. Virulence of wheat yellow rust races and resistance genes of wheat cultivars in Ecuador

    NARCIS (Netherlands)

    Ochoa, J.B.; Danial, D.L.; Paucar, B.

    2007-01-01

    Virulence factors of the yellow rust, Puccinia striiformis, populations in bread wheat were studied in Ecuador between 1973 and 2004. The number of virulence factors has increased markedly from very few in the early seventies to 16 at the end of the 90s. Isolates belonging to race 0E0 seem to be the

  2. 75 FR 41963 - Wheat and Oilseed Programs; Durum Wheat Quality Program

    Science.gov (United States)

    2010-07-20

    ... specific requirements for the Durum Wheat Quality Program (DWQP) authorized by the Food, Conservation, and... annual appropriations for DWQP. The Agriculture, Rural Development, Food and Drug Administration, and..., ``Highly Erodible Land and Wetland Conservation,'' during the year for which the person is...

  3. High Transferability of Homoeolog-Specific Markers between Bread Wheat and Newly Synthesized Hexaploid Wheat Lines

    Science.gov (United States)

    Zeng, Deying; Luo, Jiangtao; Li, Zenglin; Chen, Gang; Zhang, Lianquan; Ning, Shunzong; Yuan, Zhongwei; Zheng, Youliang; Hao, Ming; Liu, Dengcai

    2016-01-01

    Bread wheat (Triticum aestivum, 2n = 6x = 42, AABBDD) has a complex allohexaploid genome, which makes it difficult to differentiate between the homoeologous sequences and assign them to the chromosome A, B, or D subgenomes. The chromosome-based draft genome sequence of the ‘Chinese Spring’ common wheat cultivar enables the large-scale development of polymerase chain reaction (PCR)-based markers specific for homoeologs. Based on high-confidence ‘Chinese Spring’ genes with known functions, we developed 183 putative homoeolog-specific markers for chromosomes 4B and 7B. These markers were used in PCR assays for the 4B and 7B nullisomes and their euploid synthetic hexaploid wheat (SHW) line that was newly generated from a hybridization between Triticum turgidum (AABB) and the wild diploid species Aegilops tauschii (DD). Up to 64% of the markers for chromosomes 4B or 7B in the SHW background were confirmed to be homoeolog-specific. Thus, these markers were highly transferable between the ‘Chinese Spring’ bread wheat and SHW lines. Homoeolog-specific markers designed using genes with known functions may be useful for genetic investigations involving homoeologous chromosome tracking and homoeolog expression and interaction analyses. PMID:27611704

  4. Changes of chemical and mechanical behavior of torrefied wheat straw

    DEFF Research Database (Denmark)

    Shang, Lei; Ahrenfeldt, Jesper; Holm, Jens Kai;

    2012-01-01

    The purpose of the study was to investigate the influence of torrefaction on the grindability of wheat straw. Straw samples were torrefied at temperatures between 200 °C and 300 °C and with residence times between 0.5 and 3 h. Spectroscopic information obtained from ATR-FTIR indicated that below...... wheat straw and torrefied wheat straw showed a clear reduction with increasing torrefaction temperature. In addition, Hardgrove Grindability Index (HGI) of wheat straw torrefied at different conditions was determined on a standard Hardgrove grinder. Both results showed an improvement of grindability...... in the torrefaction temperature range 250–300 °C, which can be well explained by the findings from FTIR analysis. At a torrefaction temperature of 260 °C and with a residence time of 2 h, wheat straw samples produced similar HGI values as coal (RUKUZN) with 0% moisture content. Under this condition, the Anhydrous...

  5. Nutritional value and baking application of spelt wheat

    Directory of Open Access Journals (Sweden)

    Zlatica Kohajdova

    2008-09-01

    Full Text Available Cereals represent the most important group of crops in the structure of plant production from the economic, agronomic and consumer point of view. Spelt wheat (Triticum spelta L. is an ancient bread cereal related to wheat (Triticum aestivum L. that has been cultivated for hundreds of years, and that is now being rediscovered in Europe and North America. Spelt is generating increasing interest due to its agronomic, nutritional and medical characteristics. Despite of these spelt bread benefits, spelt is wheat that contains gluten proteins and is capable of provoking wheat allergy and gluten enteropathy. This review describes nutritional composition (proteins, aminoacids, starch, sugars, fiber, lipids, fatty acids, sterol, vitamins, ash and mineral compounds of spelt wheat and potential using of this cereal for baking application (flour, bread, breakfast cereals, pasta, crackers, nutrition bars, biscuits and some regional specialities.

  6. CLIMATE CHANGE AND ITS IMPACT ON WHEAT PRODUCTION IN KANSAS

    Directory of Open Access Journals (Sweden)

    Joshua C. Howard

    2016-04-01

    Full Text Available This paper studies the effect of climate change on wheat production in Kansas using annual time series data from 1949 to 2014. For the study, an error correction model is developed in which the price of wheat, the price of oats (substitute good, average annual temperature and average annual precipitation are used as explanatory variables with total output of wheat being the dependent variable. Time series properties of the data series are diagnosed using unit root and cointegration tests. The estimated results suggest that Kansas farmers are supply responsive to both wheat as well as its substitute (oat prices in the short run as well as in the long run. Climate variables; temperature has a positive effect on wheat output in the short run but an insignificant effect in the long run. Precipitation has a positive effect in the short run but a negative effect in the long run.

  7. Wheat breeding in abiotic stress conditions of solonetz

    Directory of Open Access Journals (Sweden)

    Dimitrijević Miodrag

    2012-01-01

    Full Text Available The complex stress environment at locality Kumane (Banat primarily is caused by alkaline soil of solonetz type, but includes the other sources of wheat variability, water-logging and occasional extreme temperatures, as well. In order to obtain wheat varieties that could fulfill the requirement of enhanced tolerance to abiotic stress conditions of alkaline soil a set of wheat varieties was examined in parallel trials in Kumane (solonetz, and at Rimski Šančevi on chernzem (black soil. The multiyear results helped to select usable wheat genetic material among the existing varietal genetic variability. That variability was used as parents in in situ established crosses. The results in segregating F2 offspring surpassed the average parental values for examined traits - plant height, grain number and grain weight per spike. Hence, selecting desirable genetic variability in novel variability through years could lead to wheat plant ideotype capable to bring forth a economically justified yield.

  8. The influence of soft kernel texture on the flour and baking quality of soft durum wheat

    Science.gov (United States)

    Durum (T. turgidum subsp. durum) wheat production worldwide is substantially less than that of common wheat (Triticum aestivum). Durum kernels are extremely hard; leading to most durum wheat being milled into semolina. Durum wheat production is limited in part due to the relatively limited end-user ...

  9. [Asymmetric somatic hybridization between mixed wheat and Psathyrostachys juncea].

    Science.gov (United States)

    Li, Cui-Ling; Xia, Guang-Min

    2004-07-01

    Psathyrostachys juncea is a potential source of useful genes, such as the barley yellow dwarf virus resistance, salt tolerance and drought tolerance, for wheat improvement. Conventional sexual hybridization between wheat and Psathyrostachys juncea is very difficult to occur as the two are sexual incompatible. Somatic hybridization is a promising technique for creating hybrids across the sexual border. Here we report a fusion system for somatic hybridization of wheat using PEG method. Mixed protoplasts of two wheat (Triticum aestivum L. cv. Jinan 177) culture cells (cha9 and 176) were used as the recipients to fuse with the donors, the protoplasts of Psathyrostachys juncea (Fisch.) Nevski irradiated with ultraviolet light (UV) at an intensity of 380 microW/cm2 for 1 min or 2 min. Sixteen clones were generated in the combination I, (wheat 176 + wheat cha9 + P. juncea 1 min UV treatment) and five of the hybrid clones could differentiate to green plants. All the regenerated clones were confirmed as somatic hybrids by cytological, isozyme, chromosome and random amplified polymorphic DNA (RAPD) analysis. Chloroplast genome of the hybrids was analyzed using 7 pairs of wheat-specific chloroplast microsatellite (SSR) primers. Three clones were obtained from the combination II (wheat 176 + wheat cha9 + P. juncea 2 min UV treatment), and all browned slowly and died in 3 months. This result indicated that the mixed wheat cells was helpful to the formation and regeneration of hybrid callus and the dosage of the UV had significant effect on the development of the fusion products. PMID:15968998

  10. Alien DNA introgression and wheat DNA rearrangements in a stable wheat line derived from the early generation of distant hybridization

    Institute of Scientific and Technical Information of China (English)

    ZHANG Lianquan; LIU Dengcai; YAN Zehong; ZHENG Youliang

    2005-01-01

    Polyploidy has been found to be common in plants. Bread or common wheat (Triticum aestivum L., 2n = 42) is a good example of allopolyploid made up of three diploid genomes A, B and D. In recent years, by the study of mimicking the origination of common wheat, it was found that changes of DNA sequence and gene expression occurred at the early stages of artificial allohexaploid between tetraploid wheat and Aegilops tauschii, which was probably favorable to genetic diploidization of new synthetic hexaploid wheat. Common wheat 99L2 is a new line stable in genetic, which was derived from the early self-pollinated generation of wide hybrids between common wheat and rye. In this study, it was found that at least two rye DNA segments had been introgressed into 99L2. This result suggested that a mechanism of alien DNA introgression may exist, which was different from the traditional mechanism of chromosome pairing and DNA recombination between wheat and alien species. Meanwhile, during the introgression process of alien rye DNA segments, the changes in DNA sequences of wheat itself occurred.

  11. Resistance to wheat streak mosaic virus and Triticum mosaic virus in wheat lines carrying Wsm1 and Wsm3

    Science.gov (United States)

    Wheat streak mosaic virus (WSMV) and Triticum mosaic virus (TriMV) are important viruses of wheat (Triticum aestivum L.) in the Great Plains of United States. In addition to agronomic practices to prevent damage from these viruses, temperature sensitive resistance genes Wsm1, Wsm2 and Wsm3, have bee...

  12. Fermentation of wheat: effects of backslopping different proportions of pre-fermented wheat on the microbial and chemical composition

    NARCIS (Netherlands)

    Moran, C.A.; Scholten, R.H.J.; Tricarico, J.M.; Brooks, P.H.; Verstegen, M.W.A.

    2006-01-01

    The objective of the study was to examine effect of backslop on the chemical and microbiological characteristics of fermented wheat (FW). Coarsely ground wheat was mixed with water (1:3 wt/wt) and inoculated with 6 log cfu ml(-1) each of an overnight culture of Lactobacillus plantarum and Pediococcu

  13. Introgression of chromosome segments from multiple alien species in wheat breeding lines with wheat streak mosaic virus resistance

    Science.gov (United States)

    Pyramiding of alien-derived Wheat streak mosaic virus (WSMV) resistance and resistance enhancing genes in wheat is a costeffective and environmentally safe strategy for disease control. PCR-based markers and cytogenetic analysis with genomic in situ hybridisation were applied to identify alien chrom...

  14. Registration of OK05312, a high-yielding hard winter wheat donor of Cmc4 for wheat curl mite resistance

    Science.gov (United States)

    Wheat streak mosaic (WSM) is a devastating disease in the High Plains region that is advancing eastward toward lower elevations. Its control is best achieved by combining known disease resistance genes with resistance to the insect vector. A hard red winter (HRW) wheat (Triticum aestivum L.) germpla...

  15. Response of Wheat to Tillage Plus Rice Residue and Nitrogen Management in Rice-Wheat System

    Institute of Scientific and Technical Information of China (English)

    Khalid Usman; Ejaz Ahmad Khan; Niamatullah Khan; Abdur Rashid; Fazal Yazdan; Saleem Ud Din

    2014-01-01

    Zero tillage with residues retention and optimizing nitrogen fertilization are important strategies to improve soil quality and wheat (Triticum aestivum L.) yield in rice (Oryza sativa L.)-wheat system. Field experiments were conducted on silty clay soil (Hyperthermic, and Typic Torrilfuvents) in D. I. Khan, Pakistan, to explore the impact of six tillage methods (zero tillage straw retained (ZTsr), ZT straw burnt (ZTsb), reduced tillage straw incorporated (RTsi, including tiller and rotavator), RT straw burnt (RTsb), conventional tillage straw incorporated (CTsi, including disc plow, tiller, rotavator, and leveling operations), CT straw burnt (CTsb)) and ifve nitrogen rates, i.e., 0, 100, 150, 200, and 250 kg ha-1 on wheat yield. Mean values for N revealed that spikes m-2, grains/spike, 1 000-grain weight (g), and grain yield (kg ha-1) were signiifcantly higher at 200 kg N ha-1 in both the years as well as mean over years than all other treatments. Mean values for tillage revealed that ZTsr produced highest number of spikes m-2 among tillage methods. However, grains/spike, 1 000-grain weight, and grain yield were higher in tillage methods with either straw retained/incorporated than tillage methods with straw burnt. Interaction effects were signiifcant in year 1 and in mean over years regarding spikes m-2, 1 000-grain weight, total soil organic matter (SOM), and total soil N (TSN). ZTsr produced the most spikes m-2 and 1 000-grain weight at 200 kg N ha-1. ZTsr also produced higher SOM and TSN at 200-250 kg N ha-1 at the end of 2 yr cropping. Thus ZTsr with 200 kg N ha-1 may be an optimum and sustainable approach to enhance wheat yield and soil quality in rice-wheat system.

  16. Study on Eco-climate Type Regionalization of Wheat Growing Areas in Yunnan Province

    Institute of Scientific and Technical Information of China (English)

    Yongxin; LU; Limin; CAO; Zhongping; ZHANG; Hongbo; LI

    2013-01-01

    In order to provide an objective and scientific theoretical basis for rational distribution of wheat growth in Yunnan Province,according to the relationship between Yunnan weather conditions and wheat growth adaptability,a study on eco-climate type regionalization of wheat growing areas in Yunnan was conducted using principal component analysis and GIS technology. The results show that Yunnan Province could be divided into four types,namely southern warm and humid wheat growing area,central semi-arid wheat growing area,central semi-humid wheat growing area and north-central cold wheat growing area.

  17. NEGATIVE EFFECT OF METALLOID STRESS ON WHEAT

    Directory of Open Access Journals (Sweden)

    Marína Maglovski

    2015-02-01

    Full Text Available Arsenic (As belongs to heavy metals and its accumulation in plants, besides damaging the organism itself, represents a potential health risk to animal and human consumers. Therefore, contamination of soils and waters with this compound is a serious environmental problem. In this work we focused on investigating a negative impact of As on selected parameters of growth of wheat plants (Triticum aestivum L. cv. Genoveva grown in hydropony. In the stage of first assimilation leaves we applied a solution of heavy metal (1 mg.kg-1 As3+ on wheat plants. For plants grown under hydropony conditions we observed different plant parameters such as length, weight, amount of fresh and dry biomass. Further we analyzed accumulation of hydrogen peroxide and products membrane lipid peroxidation as indicators of oxidative stress. In addition to these we also measured the content of photosynthetic pigments, maximal quantum yield and proline in plant tissue. Our data indicate reduction of the biomass of shoots forthcoming as a result of exposure of stressed plants to As. Decline of biomass accumulation was accompanied by increase of hydrogen peroxide in plant tissue. In contrast, level of lipid peroxidation was suppressed in stressed shoots. Contents of photosynthetic pigments soundly decreased. Interestingly, fluorescence (Fp=Fm in stressed wheat shoots increased. Similarly in tested shoots the content of proline was increased. The results indicate that the applied dose of As has a negative impact on the growth and photosynthetic performance of stressed plants. A better understanding of the mechanisms responsible for As resistance and toxicity in plants requires further investigation.

  18. Effects of Nitrogen Application in Different Wheat Growth Stages on the Floret Development and Grain Yield of Winter Wheat

    Institute of Scientific and Technical Information of China (English)

    ZHU Yun-ji; WANG Chen-yang; GUO Tian-cai; CUI Jin-mei; XIA Guo-jun; LIU Wan-dai; WANG Yong-hua

    2002-01-01

    The study was carried out on the effect of nitrogen application in different wheat growth stage on the floret development, the photosynthetic rate, the yield and its components of winter wheat. The result indicated that nitrogen application in the pistil-stamen primordium formation stage and the tetrad formation stage of wheat growth prolonged the duration of floret development, promoted the balance growth of floret and reduced the floret decadence number, thus increased the grain number per spike. Nitrogen application in the middle and in the late stages of wheat development increased the photosynthetic ability of the plant leaves in the later stage, and also lengthened the peak of grain filling stage, thus enhanced the grain weight and yield of wheat significantly.

  19. A positive allelopathic effect of corn cockle, agrostemma githago, on wheat, triticum aestivum

    DEFF Research Database (Denmark)

    Søgaard, B.; Doll, H.

    1992-01-01

    The effect of com cockle on wheat was studied during germination and on adult plants in a growth chamber. Seedling length of wheat germinated together with corn cockle for 5 days increased 13%. Wheat growing together with corn cockle in pots to maturity had a statistically significant higher wheat...... biomass and grain production than wheat growing alone. However, two other experiments with adult plants harvested before wheat maturity showed no effect of corn cockle on wheat production per pot. Within the pots the presence of corn cockle influenced wheat in all three experiments. Wheat plants growing...... at the same position as a corn cockle plant were 20 to 50% larger than wheat plants standing alone....

  20. Effect of spelt wheat flour and kernel on bread composition and nutritional characteristics.

    Science.gov (United States)

    Skrabanja, V; Kovac, B; Golob, T; Liljeberg Elmståhl, H G; Björck, I M; Kreft, I

    2001-01-01

    Spelt wheat seeds (Triticum aestivum subsp. spelta cv. Ostro) were used to obtain white spelt flour (64.5% yield), wholemeal spelt flour (100% yield), and scalded spelt wheat kernels. From these materials, white spelt wheat bread (WSB), wholemeal spelt wheat bread (WMSB), and spelt wheat bread with scalded spelt wheat kernels (SSKB) were made and were compared to the reference white wheat bread (WWB). The spelt wheat flours and breads contained more proteins in comparison to wheat flour and bread. Among the samples the highest rate of starch hydrolysis was noticed in WSB. During the first 30 min of incubation this particular bread was shown to have significantly more (P bread. On the other hand, the most refined spelt wheat flour resulted in a bread product (WSB) that was statistically withdrawn (P < 0.05) as one with the highest HI (112.6).

  1. Wheat Under LED's (Light Emitting Diodes)

    Science.gov (United States)

    2004-01-01

    Astroculture is a suite of technologies used to produce and maintain a closed controlled environment for plant growth. The two most recent missions supported growth of potato, dwarf wheat, and mustard plants, and provided scientists with the first opportunity to conduct true plant research in space. Light emitting diodes have particular usefulness for plant growth lighting because they emit a much smaller amount of radiant heat than do conventional lighting sources and because they have potential of directing a higher percentage of the emitted light onto plants surfaces. Furthermore, the high output LED's have emissions in the 600-700 nm waveband, which is of highest efficiency for photosynthesis by plants.

  2. Productive potentials of short stemmed wheat mutants

    International Nuclear Information System (INIS)

    Air dry F2 seeds of the cross Skorospelka-35xMexipak were gamma irradiated (5 krad). It was established that the new short-stemmed wheat mutants can olay an important role both in hybrid combination breeding and as direct cultivars. Some of these mutants (No. 65, 67-I, 67-II, etc.), proved very promising because of their high productivity combined with other valuable biological and economic characters. The results obtained show also the great potentials and the perspectives of the method of combining hybrid and induced mutant variability. (author)

  3. Expansion of the whole wheat flour extrusion

    DEFF Research Database (Denmark)

    Cheng, Hongyuan; Friis, Alan

    2008-01-01

    A new model framework is proposed to describe the expansion of extrudates with extruder operating conditions based on dimensional analysis principle. The Buckingham pi dimensional analysis method is applied to form the basic structure of the model from extrusion process operational parameters....... Using the Central Composite Design (CCD) method, whole wheat flour was processed in a twin-screw extruder with 16 trials. The proposed model can well correlate the expansion of the 16 trials using 3 regression parameters. The average deviation of the correlation is 5.9%....

  4. Chromium(Ⅵ) Reduction in Wheat Rhizosphere

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Reduction of Cr(Ⅵ) to Cr(Ⅲ) were studied in a fresh wheat rhizosphere soil (Kuroboku, high humic andosol) pretreated with a basal fertilizer consisting of (NH4)2SO4, P2O5 and KH2PO4 and with K2Cr2O7 by using a rhizobox system. It was found that rhizosphere exerted a positive effect on Cr(Ⅵ) reduction.Part of the reason was the decrease of pH in the rhizosphere due to application of (NH4)2SO4, implying that application of physiologically acid fertilizers would reduce Cr(Ⅵ) toxicity to plants.

  5. AGROBACTERIUM-MEDIATED TRANSFORMATION OF WHEAT

    Directory of Open Access Journals (Sweden)

    K. Mészáros

    2008-09-01

    Full Text Available Transformation of cereals is one of the emerging areas for plant genomic and biotechnology research. Wheat was among the last major crops to be transformed by particle bombardment about 10 years ago. However, Agrobacterium-mediated transformation has several advantages over bombardment, including a reduction in copy number, fewer rearrangements and preferential integration into transcriptionally active chromosome regions. As a first step, we started to adapt an immature embryo-based transformation method for the model variety ‘Cadenza’. The regeneration of this variety was low and especially the cost of generating donor plants was high. Therefore, we decided (i to test regeneration capacity of winter and spring wheats using four different explants, (ii to determine the optimal genotype-regeneration system combinations, and (iii to work out the details of mature embryo transformation with Agrobacterium. The experiment was carried out with 16 cultivated winter wheat and 2 model spring wheat varieties. Four different explants: anther, immature embryo, mature embryo and dry seed were tested for callus induction and plant regeneration. The regeneration capacity was the lowest in the case of anther culture and ranged from 20% (‘Mv Béres’ to 0.1% (‘Mv Magvas’ with four varieties exerting significantly higher regeneration than ‘Cadenza’. Plant regeneration from immature embryos ranged between 59% (‘Mv Regiment’ and 0.1% (‘Mv Toborzó’. Again, four varieties produced significantly more plants than the control ‘Cadenza’. We tested two systems for the plant regeneration from mature embryos. First, mature embryos were isolated from seeds, which resulted in an average of 17% plant regeneration (from 63% in ‘Fatima’ to zero in ‘Mv Palotás’. ‘Cadenza’ was one of the worse regenerating genotype (7%. The highest plant regeneration (average 54% was in the case of seed explants. There were no significant differences

  6. Substituting Normal and Waxy-Type Whole Wheat Flour on Dough and Baking Properties

    OpenAIRE

    Choi, Induck; Kang, Chun-Sik; Cheong, Young-Keun; Hyun, Jong-Nae; Kim, Kee-Jong

    2012-01-01

    Normal (cv. Keumkang, KK) and waxy-type (cv. Shinmichal, SMC) whole wheat flour was substituted at 20 and 40% for white wheat flour (WF) during bread dough formulation. The flour blends were subjected to dough and baking property measurement in terms of particle size distribution, dough mixing, bread loaf volume and crumb firmness. The particle size of white wheat flour was the finest, with increasing coarseness as the level of whole wheat flour increased. Substitution of whole wheat flour de...

  7. Addition of Manas barley chromosome arms to the hexaploid wheat genome

    OpenAIRE

    Türkösi, Edina; Cseh, András; Darkó, Éva; Molnár-Láng, Márta

    2016-01-01

    Background Cultivated barley belongs to the tertiary genepool of hexaploid wheat. Genes of interest can be transferred from barley into wheat through wide hybridization. The application of wheat-barley introgression lines could provide an excellent tool for the transfer of earliness, favourable amino acid composition, biotic stress resistance, abiotic stress tolerance, or good tillering ability into wheat. Results A set of 10 wheat-barley ditelosomic addition lines (2HS, 2HL, 3HS, 3HL, 4HS, 4...

  8. Distribution of Grain Hardness in Chinese Wheats and Genetic Analysis

    Institute of Scientific and Technical Information of China (English)

    ZHOU Yan-hua; HE Zhong-hu; YAN Jun; ZHANG Yan; WANG De-sen; ZHOU Gui-ying

    2002-01-01

    A hundred winter wheat and 41 spring wheat cultivars and advanced lines were used to investigate the distribution of grain hardness in Chinese wheats and correlations between grain hardness and other kernel traits. P1, P2, F1, F2 and F3 from three crosses, i. e. , Liken2/Yumai2, 85Zhong33/Wenmai6 and 85Zhong33/95Zhong459 were sown to study the genetics of grain hardness. Significant correlation was observed between hardness measured by Single Kernel Characteristic System 4100 (SKCS 4100) and Near Infrared (NIR) Spectroscopy, r ranging from 0. 85 to 0.94. Chinese wheat is a mixed population in terms of hardness, ranging from very soft to very hard. For autumn-sown wheat, on average, grain hardness decreases from north to south and spring-sown wheat is dominant with hard type. Hardness is negatively associated with flour color, and its associations with flour yield and ash content differ in winter and spring wheats. Grain hardness is controlled by a major gene and several minor genes with additive effect mostly, but dominant effect is also observed, with heritability of 0.78.

  9. Orthology between genomes of Brachypodium, wheat and rice

    Directory of Open Access Journals (Sweden)

    Balyan Harindra S

    2009-05-01

    Full Text Available Abstract Background In the past, rice genome served as a good model for studies involving comparative genomics of grass species. More recently, however, Brachypodium distachyon genome has emerged as a better model system for genomes of temperate cereals including wheat. During the present study, Brachypodium EST contigs were utilized to resolve orthologous relationships among the genomes of Brachypodium, wheat and rice. Findings Comparative sequence analysis of 3,818 Brachypodium EST (bEST contigs and 3,792 physically mapped wheat EST (wEST contigs revealed that as many as 449 bEST contigs were orthologous to 1,154 wEST loci that were bin-mapped on all the 21 wheat chromosomes. Similarly 743 bEST contigs were orthologous to specific rice genome sequences distributed on all the 12 rice chromosomes. As many as 183 bEST contigs were orthologous to both wheat and rice genome sequences, which harbored as many as 17 SSRs conserved across the three species. Primers developed for 12 of these 17 conserved SSRs were used for a wet-lab experiment, which resolved relatively high level of conservation among the genomes of Brachypodium, wheat and rice. Conclusion The present study confirmed that Brachypodium is a better model than rice for analysis of the genomes of temperate cereals like wheat and barley. The whole genome sequence of Brachypodium, which should become available in the near future, will further facilitate greatly the studies involving comparative genomics of cereals.

  10. Production of Biocellulosic Ethanol from Wheat Straw

    Directory of Open Access Journals (Sweden)

    Ismail

    2012-01-01

    Full Text Available Wheat straw is an abundant lignocellulosic feedstock in many parts of the world, and has been selected for producing ethanol in an economically feasible manner. It contains a mixture of sugars (hexoses and pentoses.Two-stage acid hydrolysis was carried out with concentrates of perchloric acid, using wheat straw. The hydrolysate was concentrated by vacuum evaporation to increase the concentration of fermentable sugars, and was detoxified by over-liming to decrease the concentration of fermentation inhibitors. After two-stage acid hydrolysis, the sugars and the inhibitors were measured. The ethanol yields obtained from by converting hexoses and pentoses in the hydrolysate with the co-culture of Saccharomyces cerevisiae and Pichia stipites were higher than the ethanol yields produced with a monoculture of S. cerevisiae. Various conditions for hysdrolysis and fermentation were investigated. The ethanol concentration was 11.42 g/l in 42 h of incubation, with a yield of 0.475 g/g, productivity of 0.272 gl ·h, and fermentation efficiency of 92.955 %, using a co-culture of Saccharomyces cerevisiae and Pichia stipites

  11. Evaluation of Model Wheat/Hemp Composites

    Directory of Open Access Journals (Sweden)

    Ivan Švec

    2014-02-01

    Full Text Available Model cereal blends were prepared from commercial wheat fine flour and 5 samples of hemp flour (HF, including fine (2 of conventional form, 1 of organic form and wholemeal type (2 of conventional form. Wheat flour was substituted in 4 levels (5, 10, 15, 20%. HF addition has increased protein content independently on tested hemp flour form or type. Partial model cereal blends could be distinguished according to protein quality (Zeleny test values, especially between fine and wholemeal HF type. Both flour types affected also amylolytic activity, for which a relationship between hemp addition and determined level of Falling Number was confirmed for all five model cereal blends. Solvent retention capacity profiles (SRC of partial models were influenced by both HF form and type, as well as by its addition level. Between both mentioned groups of quality features, significant correlation were proved - relationships among protein content/quality and lactic acid SRC were verifiable on p <0.01 (-0.58, 0.91, respectively. By performed ANOVA, a possibility to distinguish the HF form used in model cereal blend according to the lactic acid SRC and the water SRC was demonstrated. Comparing partial cereal models containing fine and wholemeal hemp type, HF addition level demonstrated its impact on the sodium carbonate SRC and the water acid SRC. Normal 0 21 false false false CS JA X-NONE

  12. Induction of Mutants in Durum Wheat

    International Nuclear Information System (INIS)

    This investigation presents a breeding program for induction and development of a new genotype of durum wheat, resistant to lodging with high yield, by irradiation durum wheat hybrids (F2) with gamma rays 100 Gy, during 1990-1997 cultivation seasons. This program involves: induction of variability, selection evaluation of the mutants at three locations: Twaitha (Baghdad) Latifya ( Babylon) and Swari (Kutt). All mutants showed resistance to lodging and there was a significant reduction in plant height. Mutant SIXIZ-22 surpassed other mutants and its origin in lodging resistance and plant height (83.5,82.8 and 89.4 cm) in the three locations at generation M5 and M6, respectively. Also, there were significant differences between mutant and their origin in the number of spikes/M2 and grain yild during the two successive generation. On the other hand, mutant IZxCO-105 surpassed other mutants in the number of spikes/M2 (231.8,242.3 and 292) and grain yield (4336,3376 and 5232 kg/ha) in all testing location, respectively . (authors) 14 refs., 4 tabs

  13. Nitrogen-use efficiency of irrigated wheat

    International Nuclear Information System (INIS)

    Field experiments with irrigated wheat were conducted from 1994 to 1998, using 15N, with the objective of identifying appropriate ways of managing applied N to maximize economic profit, minimize N losses and avoid environmental pollution. Fertilizer application was partitioned with one third applied at sowing and two thirds added at Zadoks growth-stage 30 (Z-30), or two thirds at sowing and one third at Z-30, at total rates of 84, 167 and 250 kg N ha-1. Urea and ammonium sulphate were compared as N-sources at sowing, whereas ammonium nitrate was used at Z-30. The optimum agronomic rate based on the average of the first two years was 178 kg N ha-1. The economic optimum was 118 kg N ha-1. The uptake of N from ammonium fertilizer was 20% higher than that from nitrate. Soil mineral N was relatively high at sowing and subsequent mineralization resulted in uptake of 90 kg N ha-1 from the zero-applied-N control plots. Soil-supplied N is, however, not considered when farmers decide on the rate of fertilizer to be applied, potentially resulting in high losses. Nitrogen-15 constituted a useful tool for understanding the relative contributions of soil and fertilizer to the N-nutrition of wheat. (author)

  14. Energy productivity and efficiency of wheat farming in Bangladesh

    International Nuclear Information System (INIS)

    Wheat is the second most important cereal crop in Bangladesh and production is highly sensitive to variations in the environment. We estimate productivity and energy efficiency of wheat farming in Bangladesh by applying a stochastic production frontier approach while accounting for the environmental constraints affecting production. Wheat farming is energy efficient with a net energy balance of 20,596 MJ per ha and energy ratio of 2.34. Environmental constraints such as a combination of unsuitable land, weed and pest attack, bad weather, planting delay and infertile soils significantly reduce wheat production and its energy efficiency. Environmental constraints account for a mean energy efficiency of 3 percentage points. Mean technical efficiency is 88% thereby indicating that elimination of inefficiencies can increase wheat energy output by 12%. Farmers' education, access to agricultural information and training in wheat production significantly improves efficiency, whereas events such as a delay in planting and first fertilization significantly reduce it. Policy recommendations include development of varieties that are resistant to environmental constraints and suitable for marginal areas; improvement of wheat farming practices; and investments in education and training of farmers as well as dissemination of information. - Highlights: • Bangladesh wheat farming is energy efficient at 20,596 MJha−1; energy ratio 2.34. • Environmental factors significantly influence productivity and energy efficiency. • Environmental factors must be taken into account when estimating wheat productivity. • Government policies must focus on ways of alleviating environmental factors. • Farmers' education, training and information sources increase technical efficiency

  15. Wettability changes of wheat straw treated with chemicals and enzymes

    Institute of Scientific and Technical Information of China (English)

    SHEN Jiang-hua; LIU Zhi-ming; LI Jing; NIU Jing

    2011-01-01

    A study was conducted to test wettability changes of the wheat straw treated with different methods for the preparation of wheat straw particle board. The wheat straws were separately sprayed with two chemicals (0.6% NaOH, 0.3% H2O2) and three enzymes (lipase, xylanase,cellulase). The contact angle between water and the surface of wheat straw was measured and the spreading-penetration parameters (K-values) were also calculated with wetting model. The surfaces of treated wheat straw and control sample were scanned by means of Micro-FTIR, and their peaks arrangements were analyzed. The surface morphologies of treated wheat straw and control sample were also observed by SEM.Chemical etching was found on the exterior surfaces of the straws treated separately with 0.6% NaOH and 0.3% H2O2; furthermore, the spreading-penetration parameters (K-values) of the distilled water on the exterior surfaces of the treated wheat straw along the grain were higher than that of control. The wettability of exterior surfaces of the wheat straws treated separately with lipase, xylanase and cellulose were improved after treating for seven days, and among the three enzymes treatments, the tipase treatment showed best result. The lipase treatment and NaOH treatment were determined as better methods for improving the wettability of wheat straw surfaces. However, in the economic aspect, NaOHtreatment was more practical and easier in the pretreatment for the manufacture of straw particle board.

  16. Catering Gluten-Free When Simultaneously Using Wheat Flour.

    Science.gov (United States)

    Miller, Kathryn; McGough, Norma; Urwin, Heidi

    2016-02-01

    A European law on gluten-free (GF) labeling came into force in 2012, covering foods sold prepacked and in food service establishments, and a similar U.S. Food and Drug Administration (FDA) regulation covers GF labeling from August 2014. Gluten is found in the grains wheat, rye, and barley. A common source of gluten in the kitchen is wheat flour. This research aimed to determine variables that have a significant effect on gluten contamination in commercial kitchens when wheat flour is in use and to establish controls necessary to assure GF production. A pilot study was used to test the following hypotheses: (i) increasing duration of exposure to wheat flour would increase gluten contamination, (ii) increasing distance between the site of preparation and the site of wheat flour would reduce gluten contamination, (iii) the use of a ventilation hood would decrease gluten contamination, and (iv) the use of a barrier segregating the site of preparation of a GF meal and the use of wheat flour would decrease gluten contamination. Petri dishes containing GF rice pudding were placed in three directions at increasing distances (0.5 to 2 m) from a site of wheat flour use. A barrier was in place between a third of samples and the site of wheat flour. After wheat flour was handled for 0.5 and 4.0 h, petri dishes were sealed and the contents were analyzed for gluten. The experiment was duplicated with the ventilation hood on and off. The pilot study revealed that a distance of 2 m from the use of wheat flour was required to control gluten contamination at ≤20 ppm if wheat flour had been in use for 4.0 h. The identified control of distance was tested in five different study sites. In each of the study sites, a test meal was prepared a minimum of 2 m away from the site of wheat flour use. Although kitchens vary and must be considered individually, the established control of a minimum 2 m distance, along with good hygiene practices, was found to be effective in preparing GF meals

  17. Wheat and barley differently affect porcine intestinal microbiota

    DEFF Research Database (Denmark)

    Weiss, Eva; Aumiller, Tobias; Spindler, Hanns K;

    2016-01-01

    Diet influences the porcine intestinal microbial ecosystem. Barrows were fitted with ileal T-cannulas to compare short-term effects of eight different wheat or barley genotypes and period-to-period effects on seven bacterial groups in ileal digesta and faeces by qPCR. Within genotypes of wheat.......001) in faeces of barley compared to wheat-fed pigs. Ileal eubacteria, Clostridium cluster IV and Roseburia spp. linearly increased from period 1 to 8 for both cereals (P intestine, with barley increasing...... the Lactobacillus spp.:Enterobacteriaceae ratio, underlining its potential to beneficially manipulate the intestinal microbial ecosystem....

  18. Lipase inactivation in wheat germ by gamma irradiation

    Science.gov (United States)

    Jha, Pankaj Kumar; Kudachikar, V. B.; Kumar, Sourav

    2013-05-01

    An attempt was made to improve the shelf life of wheat germ by optimizing processing conditions involving γ-irradiation. Studies were carried out to investigate the effect of γ-irradiation (0-30 kGy doses) on the chemical composition of wheat germ with respect to variation in moisture, total ash, crude fat, free fatty acid, protein and lipase activity. The results demonstrate that shelf stability of wheat germ was achieved by inactivation of lipase at doses of γ-irradiation greater than 12 kGy.

  19. Management Effects On Quality of Organically Grown Winter Wheat

    DEFF Research Database (Denmark)

    Thomsen, Ingrid Kaag; Schweinzer, A.; Friedel, J. K.;

    2013-01-01

    The potential for improving wheat grain quality by management strategies involving crop rotation, catch crops, and organic manure was tested in organic long-term experiments in Denmark and Austria. Growing grass clover in a four-year rotation resulted in a higher wheat yield increase that could...... following pre-crop pea. Danish grains generally contained more soluble polymers of less interest for the baking process than the Austrian ones. The study emphasizes the challenges in improving the quality of organically grown wheat beyond what is predetermined by environmental growth conditions and cultivar....... However, baking quality appeared better than could be expected from the quality parameters determined....

  20. Report on sequencing the wheat chromosome 3B

    OpenAIRE

    Choulet, Frédéric; Wincker, Patrick; Quesneville, Hadi; Brunel, Dominique; Gill, Bikram S; Appels, Rudi; Keller, Beat; Feuillet, Catherine

    2011-01-01

    Because of its 17 Gb hexaploid genome, wheat genomics has been lagging behind the one of the other major crops. Two years after the establishment of the first physical map of the biggest wheat chromosome, the 3B, which represents 1 Gb, its complete sequencing is now underway (ANR project 3BSEQ). In order to prepare for its complete sequencing and analysis, we performed a pilot project on 18 Mb of large BAC contigs which allowed us to improve our understanding of the wheat genome composition a...

  1. Thermal transitions of the amorphous polymers in wheat straw

    DEFF Research Database (Denmark)

    Stelte, Wolfgang; Clemons, Craig; Holm, Jens K.;

    2011-01-01

    determined at 2, −1 and 5 °C, respectively. Differences are likely due to different compositions of lignin and hemicelluloses from straw and spruce and structural differences between the raw materials. The high wax content in wheat straw resulted in a transition at about 40 °C which was absent in solvent......The thermal transitions of the amorphous polymers in wheat straw were investigated using dynamic mechanical thermal analysis (DMTA). The study included both natural and solvent extracted wheat straw, in moist (8–9% water content) and dry conditions, and was compared to spruce samples. Under...

  2. Manipulation of Homologous and Homoeologous Chromosome Recombination in Wheat.

    Science.gov (United States)

    Lukaszewski, Adam J

    2016-01-01

    Given the sizes of the three genomes in wheat (A, B, and D) and a limited number of chiasmata formed in meiosis, recombination by crossing-over is a very rare event. It is also restricted to very similar homologues; the pairing homoeologous (Ph) system of wheat prevents differentiated chromosomes from pairing and crossing-over. This chapter presents an overview and describes several systems by which the frequency or density of crossing-over can be increased, both in homologues and homoeologues. It also presents the standard system of E.R. Sears for engineering alien chromosome transfers into wheat. PMID:27511168

  3. Cadmium stress in wheat seedlings: growth, cadmium accumulation and photosynthesis

    DEFF Research Database (Denmark)

    Ci, Dunwei; Jiang, Dong; Wollenweber, Bernd;

    2010-01-01

    Seedlings of wheat (Triticum aestivum L.) cultivars Jing 411, Jinmai 30 and Yangmai 10 were exposed to 0, 10, 20, 30, 40 or 50 μM of CdCl2 in a solution culture experiment. The effects of cadmium (Cd) stress on wheat growth, leaf photon energy conversion, gas exchange, and Cd accumulation in wheat...... parameters were generally depressed by Cd stress, especially under the high Cd concentrations. Cd concentration and accumulation in both shoots and roots increased with increasing external Cd concentrations. Relationships between corrected parameters of growth, photosynthesis and fluorescence and corrected...

  4. Changes in the Russian Wheat Aphid (Hemiptera: Aphididae) Biotype Complex in South Africa.

    Science.gov (United States)

    Jankielsohn, Astrid

    2016-04-01

    Russian wheat aphid Diuraphis noxia (Kurdjumov) has spread from its native area in central Asia to all the major wheat-producing countries in the world to become an international wheat pest. Because the Russian wheat aphid is a serious threat to the wheat industry in South Africa, it is important to investigate the key factors involved in the distribution of Russian wheat aphid biotypes and in the changes of the Russian wheat aphid biotype complex in South Africa. There are currently four known Russian wheat aphid biotypes occurring in South Africa. Russian wheat aphid samples were collected from 2011 to 2014 during the wheat-growing season in spring and summer and these samples were screened to determine the biotype status. RWASA1 occurred predominantly in the Western Cape, while RWASA2 and RWASA3 occurred predominantly in the Eastern Free State. Following the first record of RWASA4 in 2011, this biotype was restricted to the Eastern Free State. The surveys suggest that the Russian wheat aphid bioype complex was more diverse in the Eastern Free State than in the other wheat production areas. There was also a shift in Russian wheat aphid biotype composition over time. The Russian wheat aphid biotype complex is dynamic, influenced by environmental factors such as host plants, altitude, and climate, and it can change and diversify over time causing fluctuation in populations over sites and years. This dynamic nature of the Russian wheat aphid will continue to challenge the development of Russian wheat aphid-resistant wheat cultivars in South Africa, and the continued monitoring of the biotypic and genetic structure, to determine genetic relatedness and variation in different biotypes, of Russian wheat aphid populations is important for protecting wheat.

  5. Changes in the Russian Wheat Aphid (Hemiptera: Aphididae) Biotype Complex in South Africa.

    Science.gov (United States)

    Jankielsohn, Astrid

    2016-04-01

    Russian wheat aphid Diuraphis noxia (Kurdjumov) has spread from its native area in central Asia to all the major wheat-producing countries in the world to become an international wheat pest. Because the Russian wheat aphid is a serious threat to the wheat industry in South Africa, it is important to investigate the key factors involved in the distribution of Russian wheat aphid biotypes and in the changes of the Russian wheat aphid biotype complex in South Africa. There are currently four known Russian wheat aphid biotypes occurring in South Africa. Russian wheat aphid samples were collected from 2011 to 2014 during the wheat-growing season in spring and summer and these samples were screened to determine the biotype status. RWASA1 occurred predominantly in the Western Cape, while RWASA2 and RWASA3 occurred predominantly in the Eastern Free State. Following the first record of RWASA4 in 2011, this biotype was restricted to the Eastern Free State. The surveys suggest that the Russian wheat aphid bioype complex was more diverse in the Eastern Free State than in the other wheat production areas. There was also a shift in Russian wheat aphid biotype composition over time. The Russian wheat aphid biotype complex is dynamic, influenced by environmental factors such as host plants, altitude, and climate, and it can change and diversify over time causing fluctuation in populations over sites and years. This dynamic nature of the Russian wheat aphid will continue to challenge the development of Russian wheat aphid-resistant wheat cultivars in South Africa, and the continued monitoring of the biotypic and genetic structure, to determine genetic relatedness and variation in different biotypes, of Russian wheat aphid populations is important for protecting wheat. PMID:26803815

  6. Share of anthropophytes in the crop sequence: winter wheat – maize – spring wheat depending on tillage system

    Directory of Open Access Journals (Sweden)

    Tomasz R. Sekutowski

    2014-07-01

    Full Text Available An experiment, conducted over the period 2008–2010, evaluated the effect of tillage system on the occurrence and species composition of anthropophytes in winter wheat, maize and spring wheat. Regardless of crop plant and tillage system, anthropophytes (73.9%, represented by archaeophytes and kenophytes, were the main component of the flora in the crops studied, whereas apophytes accounted for the remaining 26.1%. Most archaeophytes (13 species were found in the spring wheat crop under no-tillage, while their lowest number (6 species occurred in the spring wheat crop under conventional tillage. The only kenophyte, Conyza canadensis, was found to occur in the spring wheat and maize crops in the no-tillage system. The following taxa were dominant species among archeophytes: Geranium pusillum, Anthemis arvensis, and Viola arvensis (regardless of tillage system and crop plant, Anthemis arvensis (in spring wheat – conventional tillage, Echinochloa crus-galli and Setaria glauca (in maize – reduced tillage and no-tillage, Chenopodium album (in maize – no-tillage as well as Apera spica-venti, Anthemis arvensis and Papaver rhoeas (in winter wheat – no-tillage.

  7. The case of the missing wheat

    Science.gov (United States)

    Lobell, David B.

    2012-06-01

    In Lewis Carroll's Through the Looking Glass, Alice finds herself running as fast as she can but not moving anywhere. The Red Queen explains to her 'Now, here, you see, it takes all the running you can do, to keep in the same place. If you want to get somewhere else, you must run at least twice as fast as that.' Such is the situation in global agriculture. Global demand for agricultural products continues to rise as population grows and people get richer. As they get richer, people have fewer babies but eat more. And they use a lot more energy, which is increasingly derived from agricultural products. Crop technologies have to move incredibly fast just to keep up. Remarkably, over the past 50 years they have, with yields (production per hectare of land) for most crops more than doubling since 1960, and real prices of food falling for most of the period. In many ways we have come to take continued yield growth for granted. But, as Lin and Huybers show [1] elsewhere in this issue, there is increasing evidence that this growth has stalled in many regions. The question is not new—people have worried about the pace of yield growth since at least the days of Malthus [2, 3]. But Lin and Huybers [1] use updated data and bring a new rigor to identifying where stagnation is statistically significant, for example by taking care to account for year-to-year correlation in yields. They report that for slightly more than half of the regions that they inspected, it is likely (80% chance) that yield growth has already flattened out. For many of these countries, responsible for about one quarter of global wheat production, the stagnation has very likely occurred (95% chance). Why are yields of wheat stagnating in so many areas? At least four suspects seem plausible. One narrative is that for years the real price of wheat was declining, providing little incentive for innovation. The most obvious consequence was a major decline in investment in research and development in most

  8. Empirical rheology and pasting properties of soft-textured durum wheat (Triticum turgidum ssp. durum) and hard-textured common wheat (T. aestivum)

    Science.gov (United States)

    Puroindoline (PIN) proteins are the molecular basis for wheat kernel texture classification and affect flour milling performance. This study aimed at investigating the effect of PINs on kernel physical characteristics and dough rheological properties of common wheat (Alpowa cv, soft wheat) and durum...

  9. [Population dynamics of ground carabid beetles and spiders in a wheat field along the wheat-alfalfa interface and their response to alfalfa mowing].

    Science.gov (United States)

    Liu, Wen-Hui; Hu, Yi-Jun; Hu, Wen-Chao; Hong, Bo; Guan, Xiao-Qing; Ma, Shi-Yu; He, Da-Han

    2014-09-01

    Taking the wheat-alfalfa and wheat-wheat interfaces as model systems, sampling points were set by the method of pitfall trapping in the wheat field at the distances of 3 m, 6 m, 9 m, 12 m, 15 m, 18 m, 21 m, 24 m, and 27 m from the interface. The species composition and abundance of ground carabid beetles and spiders captured in pitfalls were investigated. The results showed that, to some extent there was an edge effect on species diversity and abundance of ground carabid beetles and spiders along the two interfaces. A marked edge effect was observed between 15 m and 18 m along the alfalfa-wheat interface, while no edge effect was found at a distance over 20 m. The edge effect along the wheat-wheat interface was weaker in comparison to the alfalfa-wheat interface. Alfalfa mowing resulted in the migration of a large number of ground carabid beetles and spiders to the adjacent wheat filed. During ten days since mowing, both species and abundance of ground carabid beetles and spiders increased in wheat filed within the distance of 20 m along the alfalfa-wheat interface. The spatial distribution of species diversity of ground beetles and spiders, together with the population abundance of the dominant Chlaenius pallipes and Pardosa astrigera, were depicted, which could directly indicate the migrating process of natural enemy from alfalfa to wheat field. PMID:25757322

  10. Products deriving from microbial fermentation are linked to insulinaemic response in pigs fed breads prepared from whole-wheat grain and wheat and rye ingredients

    DEFF Research Database (Denmark)

    Theil, Peter Kappel; Jørgensen, Henry Johs. Høgh; Serena, Anja;

    2011-01-01

    The effects of wheat and rye breads made from whole-wheat grain (WWG), wheat aleurone flour (WAF) or rye aleurone flour (RAF) on net portal absorption of carbohydrate-derived nutrients (glucose, SCFA and lactate) and apparent insulin secretion were studied in a model experiment with catheterised...

  11. Metals in wheat flour: comparative study and safety control

    Directory of Open Access Journals (Sweden)

    Raquel L. Tejera

    2013-04-01

    Full Text Available Cereal industry and its derived products have a big economic and social importance worldwide. Therefore, as wheat flour is a commodity for all bread and bakery industry, it is safety is of high nutrition and toxicological interest. In this investigation we intend to study and determine the content of twelve metals in 50 samples of wheat flour coming from a wheat flour industry. Macro elements sodium, potassium magnesium and calcium, micro elements manganese, iron, copper, zinc, chrome and nickel as well as toxic trace elements cadmium and lead have been analysed. The estimated diary intake of each metal and their contribution in percentage terms to the RDI (macro and micro elements and to the PTWI (toxic elements has been determined. Contribution of Cd and Pb to the PTWI was very low, a fact that shows safety in this wheat flour concerning toxic metals.

  12. AgMIP wheat pilot data 4 release

    NARCIS (Netherlands)

    Asseng, S.; Ewert, F.; Martre, P.; Supit, I.; Wolf, J.

    2015-01-01

    The data set includes a current representative management treatment from detailed, quality-tested sentinel field experiments with wheat from four contrasting environments including Australia, The Netherlands, India and Argentina. Measurements include local daily climate data (solar radiation, maximu

  13. POLYETHER POLYURETHANE FROM MODIFIED WHEAT STRAW OXYGEN-ALKALINE LIGNIN

    Institute of Scientific and Technical Information of China (English)

    QuanxiaoLiu; HuaiyuZhan; BeihaiHe; ShuhuiYang; JianhuaLiu; JianluLiu(1); ZhenxingPang

    2004-01-01

    Polyether polyurethane was synthesized from modified wheat straw oxygen-alkaline lignin, polyethylene glycol and two different diisocyanates (diphenylemethane-4, 4'-diisocyanate, tolulene diisocyanate) by solution casting method, its properties were investigated. The results show that modified wheat straw oxygen-alkaline lignin can substitute part of polyethylene glycol to react with diisocyanate to synthesize polyurethane. The molar ratio of NCO to OH and modified wheat straw oxygen-alkaline lignin content affect the properties of lignin-based polyether polyurethane respectively. The addition of plasticizer in the polyurethane synthesis process improves the properties of synthesized polyurethane, especially the elasticity of polyurethane. The synthesized polyurethane from modified wheat straw oxygen-alkali lignin can be used as both engineering plastic and hard foam plastic in future.

  14. POLYETHER POLYURETHANE FROM MODIFIED WHEAT STRAW OXYGEN-ALKALINE LIGNIN

    Institute of Scientific and Technical Information of China (English)

    Quanxiao Liu; Huaiyu Zhan; Beihai He; Shuhui Yang; Jianhua Liu; Jianlu Liu; Zhenxing Pang

    2004-01-01

    Polyether polyurethane was synthesized from modified wheat straw oxygen-alkaline lignin,polyethylene glycol and two different diisocyanates (diphenylemethane-4, 4′-diisocyanate, tolulene diisocyanate) by solution casting method, its properties were investigated. The results show that modified wheat straw oxygen-alkaline lignin can substitute part of polyethylene glycol to react with diisocyanate to synthesize polyurethane. The molar ratio of NCO to OH and modified wheat straw oxygen-alkaline lignin content affect the properties of lignin-based polyether polyurethane respectively. The addition of plasticizer in the polyurethane synthesis process improves the properties of synthesized polyurethane, especially the elasticity of polyurethane. The synthesized polyurethane from modified wheat straw oxygen-alkali lignin can be used as both engineering plastic and hard foam plastic in future.

  15. 21 CFR 137.200 - Whole wheat flour.

    Science.gov (United States)

    2010-04-01

    ... from Aspergillus oryzae, alone or in a safe and suitable carrier. The moisture content of whole wheat...”. When the optional ingredient “α”-amylase obtained from Aspergillus oryzae” is used, it...

  16. [Effects of organic manure on wheat growth under lead stress].

    Science.gov (United States)

    Qiao, Sha-sha; Zhang, Yong-qing; Yang, Li-wen; Pei, Hong-bin; Sun, Hong-shuai

    2011-04-01

    A pot experiment was conducted to study the effects of organic manure on the wheat growth under different levels of lead stress. With increasing lead stress level, whether fertilization or not, the plant height, shoot dry mass, adventitious root number, root total length, root dry mass, root activity, root total and active absorbing area, and root SOD and POD activities decreased, and root MDA content presented an increasing trend. The decrement of the above-mentioned parameters differed with fertilization treatments. Applying organic manure mitigated the impact of lead stress on wheat growth to some extent, delayed the senescence of wheat roots, and promoted root development and growth, ultimately leading to the increase of wheat yield and the decrease of lead content in grain.

  17. Split-gene system for hybrid wheat seed production.

    Science.gov (United States)

    Kempe, Katja; Rubtsova, Myroslava; Gils, Mario

    2014-06-24

    Hybrid wheat plants are superior in yield and growth characteristics compared with their homozygous parents. The commercial production of wheat hybrids is difficult because of the inbreeding nature of wheat and the lack of a practical fertility control that enforces outcrossing. We describe a hybrid wheat system that relies on the expression of a phytotoxic barnase and provides for male sterility. The barnase coding information is divided and distributed at two loci that are located on allelic positions of the host chromosome and are therefore "linked in repulsion." Functional complementation of the loci is achieved through coexpression of the barnase fragments and intein-mediated ligation of the barnase protein fragments. This system allows for growth and maintenance of male-sterile female crossing partners, whereas the hybrids are fertile. The technology does not require fertility restorers and is based solely on the genetic modification of the female crossing partner.

  18. EVOLUTION OF SUPPLY AND DEMAND OF WHEAT IN ROMANIA

    Directory of Open Access Journals (Sweden)

    Diana-Elena MARIN

    2014-04-01

    Full Text Available The paper aimed to present the evolution of supply demand and of wheat in Romanian market. It is based on the statistical data provided by National Institute of Statistics and European Statistics (Eurostat. The data have been processed into the following indicators: cultivated surfaces, obtained production, consumption per capita. Wheat production is correlated with seeding surface, but, sometimes paradoxes appear, where even if the cultivated surface is large the production is low. During the analyzed period, cultivated surfaces remained constantly; the production has continuously increased, so that in the year 2013 there are 7,383 million tonnes of wheat in Romania. As a conclusion, Romania is able to support domestic demand for wheat and can also export a significant amount of this grain.

  19. Wheat straw: An inefficient substrate for rapid natural lignocellulosic composting.

    Science.gov (United States)

    Zhang, Lili; Jia, Yangyang; Zhang, Xiaomei; Feng, Xihong; Wu, Jinjuan; Wang, Lushan; Chen, Guanjun

    2016-06-01

    Composting is a promising method for the management of agricultural wastes. However, results for wheat straw composts with different carbon-to-nitrogen ratios revealed that wheat straw was only partly degraded after composting for 25days, with hemicellulose and cellulose content decreasing by 14% and 33%, respectively. No significant changes in community structure were found after composting according to 454-pyrosequencing. Bacterial communities were represented by Proteobacteria and Bacteroidetes throughout the composting process, including relatively high abundances of pathogenic microbes such as Pseudomonas and Flexibacter, suggesting that innocent treatment of the composts had not been achieved. Besides, the significant lignocellulose degrader Thermomyces was not the exclusively dominant fungus with relative abundance only accounting for 19% of fungal communities. These results indicated that comparing with maize straw, wheat straw was an inefficient substrate for rapid natural lignocellulose-based composting, which might be due to the recalcitrance of wheat straw. PMID:26980627

  20. Cleaner Production of Wheat Straw Pulp

    Institute of Scientific and Technical Information of China (English)

    黄国林; 陈中胜; 张成芳

    2002-01-01

    A pulping method using NH4OH with less amount of KOH as cooking liquor on wheat straw was developed. KOH could reduce consumption of NH3 and cooking time for its strong alkalinity. The effects of various pulping conditions such as composition of cooking liquor, liquid-to-solid ratio, maximum temperature, cooking time to the maximum temperature and cooking time at the maximum temperature were studied. Experimental results indicated that the rate of delignification was 85.12( and the pulp yield was 49.65% under suitable pulping conditions. It looks promising to use black liquor containing nitrogen, phosphorus, potassium and organic substance as fertilizer resources for agricultural production. A new pattern of ecological cycling may be set up between paper industry and farming.

  1. Winter Wheat Root Growth and Nitrogen Relations

    DEFF Research Database (Denmark)

    Rasmussen, Irene Skovby

    Root growth is an essential parameter regarding nitrogen (N) uptake efficiency, as more and deeper roots may improve the uptake from deeper soil layers and reduce nitrate leaching losses. During this PhD project, it was studied how different agronomic practices influence root growth and N relations...... in winter wheat (Triticum aestivum L). Field experiments on the effect of sowing date, N fertilization and cultivars were conducted on a sandy loam soil in Taastrup, Denmark. The root studies were conducted by means of the minirhizotron method. Also, a field experiment on the effect of defoliation and N...... fertilization was conducted in Canberra, Australia. Here the root studies were done by means of the core-break method and root washing....

  2. Wheat and barley seed systems in Ethiopia and Syria

    OpenAIRE

    Bishaw, Z.

    2004-01-01

    Keywords: Wheat,Triticumspp., Barley,Hordeumvulgare L., Seed Systems, Formal Seed Sector, Informal Seed Sector, National Seed Program, Seed Source, Seed Selection, Seed Management, Seed Quality, Genetic Diversity, Ethiopia, SyriaInEthiopiaandSyria, wheat and barley are the two most important principal cereal crops grown since ancient times.Manygenerations of natural and human selection led into highly adapted and diverse populations of local landraces. For most of the history of agriculture, ...

  3. Elements of Integration in Winter Wheat Protection Programs

    OpenAIRE

    Cecylia Jańczak; Grażyna Filoda; Robert Matysiak

    2012-01-01

    In Poland winter wheat is grown on the area of 1.600.000 ha. Most of the plant protection treatments are being done without thorough analysis of real threats from pests and diseases. The aim of the research is to develop the optimal program of wheat protection against pests and diseases based on integration of various methods of plant protection. Two programs: conventional and integrated were compared. In integrated program the eventual needs and terms of treatments were estimated on the basi...

  4. MECHANISMS INVOLVED IN MYCORRHIZAL WHEAT PROTECTION AGAINST POWDERY MILDEW.

    Science.gov (United States)

    Mustafa, G; Tisserant, B; Randoux, B; Fontaine, J; Sahraoui, A Lounes-Hadj; Reignault, Ph

    2014-01-01

    In France, the Ecophyto 2018 national action plan will set out to reduce the use of pesticides by 50% by 2018, if possible. To achieve this goal, the use of arbuscular mycorrhizal (AM) fungi could be a potential alternative method allowing the control of crop diseases. The inoculation by AM fungi has been demonstrated to protect plants against soil-borne pathogens, but little is known about their effectiveness against aerial pathogens, such as the biotrophic fungus Blumeria graminis f.sp. tritici (Bgt) causing wheat (Triticum aestivum) powdery mildew. In the present study, wheat plants were grown in pots, under controlled conditions. Using various phosphorus (P) concentrations, the effectiveness of three AM inocula (Rhizophagus irregularis (Ri), Funneliformis mosseae (Fm)) and Solrize, a mixture of Ri and Fm) in Orvantis wheat cultivar, were tested. After 42 days of culture, mycorrhizal (M) and non-mycorrhizal (NM) wheat plants were infected by Bgt. A satisfactory mycorrhizal rate was obtained with the phosphorus concentration P/5 (P corresponding to the dose used in wheat fields in = 62 mg/L). Our work shows, for the first time, (i) a protective effect of AM inoculation against wheat powdery mildew, reaching up to 73% with Fm inocula, and (ii) its ability to induce a systemic resistance in wheat. Thereafter, we investigated mechanisms involved in this protection. Control plants, M plants, infected plants by Bgt, and M-infected plants were compared at: (i) cytological level, our results revealed that papillae and whole-fluorescent cells presence was induced, conversely fungal haustorium formation in epidermal cells was reduced within M plants leaves (ii) enzymatic level-by assessing defense enzyme activities (lipoxygenase, peroxidase) known as defense markers were measured 24, 48, 72 and 96 hours after infection (hai). The importance of these activities in the defense pathways induced in wheat by AM fungi will be discussed. PMID:26080475

  5. Taxonomical classification and origin of Kamut(A (R)) wheat

    OpenAIRE

    Michalcová, V.; Dušinský, R.; Sabo, M.; Al Beyroutiová, M.; Hauptvogel, P.; Ivaničová, Z. (Zuzana); Švec, M.

    2014-01-01

    Bioagriculture and healthy lifestyle are trends of the twenty-first century. Bioagriculture involves the breeding of crops without using modern synthetic substances. Kamut brand wheat is one of the popular biocereals grown mainly in the USA and Europe. This cereal has the status of ancient wheat, not only because it has been grown since the era of the ancient Egyptian civilization, but also for its properties favorable for modern breeding programs and modern food marketing. In spite of Kamut'...

  6. Wet explosion og wheat straw and codigestion with swine manure

    DEFF Research Database (Denmark)

    Wang, Guangtao; Gavala, Hariklia N.; Skiadas, Ioannis V.;

    2009-01-01

    compared to that from the raw biomas s. On the other hand, the results from the codigestion of raw (non-pretreated) wheat straw with swine manure were very promising, suggesting that 4.6 kg of straw added to 1 t of manure increase the methane production by 10%. Thus, wheat straw can be considered...... as a promising, low-cost biomass for increasing the methane productivity of biogas plants that are based mainly on swine manure....

  7. Effect of wheat puroindoline alleles on functional properties of starch

    OpenAIRE

    Brites, Carla Moita; Santos, Carla Alexandra Lourenço; Bagulho, Ana Sofia; Beirão-da-Costa, Maria Luisa

    2008-01-01

    Puroindoline a and b (Pina, Pinb) form the molecular basis of bread wheat grain hardness. Varieties with a softer endosperm and a wild genotype, in which both Pina and Pinb were present, seemed to produce less damaged starch Xour than hard varieties, where Pin mutations occurred and changed the starch rheological properties. The functional property of starch samples extracted from wheat varieties with diVerent Pin alleles was evaluated. Starch morphology was characteri...

  8. Characterization of Brazilian wheat cultivars for specific technological applications

    OpenAIRE

    Patrícia Matos Scheuer; Alicia de Francisco; Martha Zavariz de Miranda; Paulo José Ogliari; Gisele Torres; Valéria Limberger; Flávio Martins Montenegro; Cristiane Rodrigues Ruffi; Sílvia Biondi

    2011-01-01

    Functional and technological properties of wheat depend on its chemical composition, which together with structural and microscopic characteristics, define flour quality. The aim of the present study was to characterize four Brazilian wheat cultivars (BRS Louro, BRS Timbauva, BRS Guamirim and BRS Pardela) and their respective flours in order to indicate specific technological applications. Kernels were analyzed for test weight, thousand kernel weight, hardness, moisture, and water activity. F...

  9. Drug transporters of the fungal wheat pathogen Mycosphaerella graminicola

    NARCIS (Netherlands)

    Roohparvar, R.

    2007-01-01

    Wheat is the most important cereal crop in the world. It occupies 17% of the cultivated land and is the main source of food for 35% of the world population. InIran, wheat is the most important agricultural crop and b

  10. Effect of warming temperatures on US wheat yields

    OpenAIRE

    Tack, Jesse; Barkley, Andrew; Nalley, Lawton Lanier

    2015-01-01

    This study provides insights for wheat breeding efforts, public policy, and agricultural decision making related to climate change. Our findings provide opportunities for the international wheat breeding community to intensify research efforts to increase resistance to heat stress during focused developmental stages. These efforts could result in net positive warming effects since reduced exposure to freeze was found to be a yield-enhancing benefit of warming. Our results indicate that advanc...

  11. Split-gene system for hybrid wheat seed production

    OpenAIRE

    Kempe, Katja; Rubtsova, Myroslava; Gils, Mario

    2014-01-01

    Global food security demands the development of new technologies to increase and secure cereal production on finite arable land without increasing water and fertilizer use. Although the use of heterosis through hybrid breeding has produced tremendous economic benefits in worldwide crop production, less than 1% of the global wheat area is planted with hybrids. One of the greatest bottlenecks in breeding hybrid wheat is the lack of an efficient sterility system to block self-pollination. This r...

  12. Combining ability and heterosis effect in hexaploid wheat group

    Directory of Open Access Journals (Sweden)

    Titan Primož

    2012-01-01

    Full Text Available The main goal of hybrid wheat breeding is the identification of parents with high specific combining ability for grain yield and other agronomic traits. This kind of data facilitate the development of hybrid combinations with high level of heterosis in first filial generation (F1 generation. The use of species from the hexaploid wheat group (e.g. Triticum spelta L. Triticum compactum HOST... is representing an opportunity for the increase of heterosis level in the germplasm of common wheat (Triticum aestivum L.. The study of combining ability and heterosis effect in hexaploid wheat group was carried out using crosses between thirteen inbred lines of common wheat (6 lines x 7 testers and inter-species crosses (T. aestivum L. × T. spelta L., T. aestivum L. × T. compactum HOST, T. aestivum L. × T. sphaerococcum PERCIV., T. aestivum L. × T. macha DEKAPR. et MENABDE, T. aestivum L. × T. petropavlovskyi UDACZ. et MIGUSCH, T. aestivum L. × T. vavilovii (THUM. JAKUBZ.. The 42 common wheat F1 hybrids were tested during two seasons (2010/11 and 2011/12 on the Selection center Ptuj. The experiment was carried out in a randomized block design with four replications. The 43 interspecies F1 hybrids were tested on the same location in the season 2011/12 and the experiment was designed as an randomized block with three replications. The results were analyzed using statistical package AGROBASE generation II and STATGRAPHICS Centurion XVI. The analysis of variance was significant for both, GCA and SCA variances (P < 0,01. Generally, SCA variances were lower than GCA variances. We could state, that the improvement of heterosis level in the common wheat germplasm through the use of relatives with the same genome (genome BAD is possible. As an example we can point out the interspecies F1 hybrid between common wheat variety Garcia and an accession of the Triticum sphaerococcum PERCIV. species (accession number 01C0201227.

  13. Combining ability of wheat parents in two generations

    OpenAIRE

    Elesandro Bornhofen; Giovani Benin; Gilvani Matei; Cristiano Lemes da Silva; Eduardo Beche; Eduardo Stefani Pagliosa; Thaís Raquel Hagemann; Cilas Pinnow

    2013-01-01

    The objective of this study were to estimate the general ability and specific combining ability in ten wheat genotypes in two generations (F1 and F2) to indicate parents and hybrid combinations that are promising to achieve new favorable combinations. Ten wheat genotypes were hybridized in a complete diallel, without reciprocals, totaling 45 hybrid combinations. F1 hybrids and the F2 populations and parents were evaluated in a randomized block design with three replicates in spaced plant. The...

  14. Combining ability and heterosis effect in hexaploid wheat group

    OpenAIRE

    Titan Primož; Meglič Vladimir; Iskra Jernej

    2012-01-01

    The main goal of hybrid wheat breeding is the identification of parents with high specific combining ability for grain yield and other agronomic traits. This kind of data facilitate the development of hybrid combinations with high level of heterosis in first filial generation (F1 generation). The use of species from the hexaploid wheat group (e.g. Triticum spelta L. Triticum compactum HOST...) is representing an opportunity for the increase of heterosis lev...

  15. Selected items of wheat variation - from palaeobotany to molecular biology

    OpenAIRE

    Romuald Kosina

    2014-01-01

    The usefulness of data on ecotypes of wheat as well as of information about distribution of genes of hybrid necrosis for an interpretation of some questionable detections of fossil materials is emphasized. Variability of contemporary wheats is illustrated by means of morphology of lodicules, anatomical structure of caryopsis, morphology of embryo and features of epidermis of inflorescence bracts. These structures exhibit often a trend dependent on ploidy level. Discrimination of similar grain...

  16. The fungal community changes over time in developing wheat heads.

    Science.gov (United States)

    Hertz, Morten; Jensen, Iben Ravnborg; Jensen, Laura Østergaard; Thomsen, Søren Nøhr; Winde, Jacob; Dueholm, Morten Simonsen; Sørensen, Lydia Henriette; Wollenberg, Rasmus Dam; Sørensen, Hans Otto; Sondergaard, Teis Esben; Sørensen, Jens Laurids

    2016-04-01

    Under normal conditions, wheat is colonized by a multitude of fungi that can have beneficial or adverse effects on plant growth and yield. To study the effect of spraying wheat heads with fungicides on the fungal community from emergence to harvest we applied an amplicon sequencing approach on single wheat heads. The climatic data showed that the spring of 2014 was very dry and without precipitation in the two weeks around flowering. An initial quantitative PCR showed that the total amount of fungal DNA increased during the entire period, without significant difference between sprayed and control wheat heads. Amplicon sequencing of the internal transcribed spacer 2 (ITS2) region showed that operational taxonomic units (OTUs) identified as Sporobolomyces roseus dominated in the first weeks, whereas Alternaria infectoria OTUs dominated in the last weeks before harvest. The only observed significant difference was that the control wheat heads contained more of the powdery mildew causing Blumeria graminis f. sp. tritici OTUs compared with the sprayed wheat heads. The dry conditions around flowering most likely also had an effect on Fusarium head blight infection as Fusarium OTUs were only sporadically encountered. Analyses of secondary metabolites produced by Fusarium and Alternaria in the wheat heads confirmed the observations from the amplicon sequencing. Enniatin B was the most frequent contaminant present in four sprayed (49-538 ng/g) and three control (56-355 ng/g) wheat heads. The A. infectoria secondary metabolites infectopyrone and 4Z-infectopyrone were however consistently observed in all samples collected the last five weeks before harvest. PMID:26836252

  17. Physicochemical and Sensory Characteristics of Pretzel with Wheat Bran

    OpenAIRE

    Adriana Păucean; Simona Man; Sevastiţa Muste; Anamaria Pop

    2015-01-01

    It is well supported that a significant intake of dietary fibre reduces the risk of several chronic diseases. The development of staple foods enriched with fibre is an important contribution to a broader supply of food products with health beneficial effect. In this context, partial substitution of wheat flour with wheat bran at levels of 3%, 5% and 10% was carried out to investigate physicochemical (moisture, ash, fiber and acidity)  and sensory properties of pretzel.  Sensory analyses inclu...

  18. Somaclonal variation for disease resistance in wheat and production of dihaploids through wheat x maize hybrids

    Directory of Open Access Journals (Sweden)

    Yeshwant R. Mehta

    2000-09-01

    Full Text Available Seven wheat cultivars having some degree of resistance to Bipolaris sorokiniana, Magnaporthe grisea or Xanthomonas campestris pv. undulosa (Xcu provided somaclonal variation for disease resistance. Callus induction varied from 69.4 to 100% across the cultivars, whereas regeneration frequency of R1 plants (regenerated plants of first generation varied between 2.7 and 23.1%. Resistance variation in the R2-regenerated second generation plants was observed for B. sorokiniana and M. grisea but not for Xcu. Attempts were made to fix the resistance characteristics of R3-regenerated third generation somaclones through wheat x maize hybrids. Wheat and maize hybridization of seven wheat somaclones yielded 81 embryos. A total of 11,624 somaclone florets were pollinated, of which 8.4% produced haploid embryos across the seven wheat genotypes. Hybrid embryo production varied between 0 and 25%. The somaclones had a constant chromosome number as observed in their original hexaploid wheat genotypes (2n = 6x = 42 whereas the haploid plants had n = 21. Hybrid embryo production and haploid and dihaploid plant production were affected by 2,4-D concentration, but not by the wheat genotype.Sete cultivares de trigo possuindo certo nível de resistência a Bipolaris sorokiniana, Magnaporthe grisea, Xanthomonas campestris pv. undulosa (Xcu, foram usadas para variação somaclonal, a fim de induzir um nível maior de resistência. A freqüência de indução de calos variou entre 69,4 e 100 entre as cultivares, enquanto que, a freqüência de regeneração de plantas R1 variou entre 2,7 e 23,1, dependendo da cultivar. A variação para resistência entre as plantas de R2 foi observada para B. sorokiniana e M. grisea, mas não para Xcu. Procurou-se fixar as características de resistência dos somaclones (R3 através de hibridação com milho. A hibridação entre trigo e milho produziu 81 embriões zigotos. Um total de 11.624 flores de somaclones foram polinizadas, das

  19. Changes in Root Hydraulic Conductivity During Wheat Evolution

    Institute of Scientific and Technical Information of China (English)

    Chang-Xing ZHAO; Xi-Ping DENG; Lun SHAN; Ernst STEUDLE; Sui-Qi ZHANG; Qing YE

    2005-01-01

    A better understanding of the mechanisms of water uptake by plant roots should be vital for improving drought resistance and water use efficiency (WUE). In the present study, we have demonstrated correlations between root system hydraulic conductivity and root characteristics during evolution using six wheat evolution genotypes (solution culture) with different ploidy chromosome sets (Triticum boeoticum Bioss., T. monococcum L.: 2n = 2x = 14; T. dicoccides Koern., T. dicoccon (Schrank) Schuebl.: 2n = 4x = 28;T. vulgare Vill., T. aestivum L. cv. Xiaoyan No. 6: 2n = 6x = 42). The experimental results showed that significant correlations were found between root system hydraulic conductivity and root characteristics of the materials with the increase in ploidy chromosomes (2x→6x) during wheat evolution. Hydraulic conductivity of the wheat root system at the whole-plant level was increased with chromosome ploidy during evolution, which was positively correlated with hydraulic conductivity of single roots, whole plant biomass,root average diameter, and root growth (length, area), whereas the root/shoot ratio had an inverse correlation with the hydraulic conductivity of root system with increasing chromosome ploidy during wheat evolution. Therefore, it is concluded that that the water uptake ability of wheat roots was strengthened from wild to modern cultivated species during evolution, which will provide scientific evidence for genetic breeding to improve the WUE of wheat by genetic engineering.

  20. Genetic analysis of wheat domestication and evolution under domestication.

    Science.gov (United States)

    Peleg, Zvi; Fahima, Tzion; Korol, Abraham B; Abbo, Shahal; Saranga, Yehoshua

    2011-10-01

    Wheat is undoubtedly one of the world's major food sources since the dawn of Near Eastern agriculture and up to the present day. Morphological, physiological, and genetic modifications involved in domestication and subsequent evolution under domestication were investigated in a tetraploid recombinant inbred line population, derived from a cross between durum wheat and its immediate progenitor wild emmer wheat. Experimental data were used to test previous assumptions regarding a protracted domestication process. The brittle rachis (Br) spike, thought to be a primary characteristic of domestication, was mapped to chromosome 2A as a single gene, suggesting, in light of previously reported Br loci (homoeologous group 3), a complex genetic model involved in spike brittleness. Twenty-seven quantitative trait loci (QTLs) conferring threshability and yield components (kernel size and number of kernels per spike) were mapped. The large number of QTLs detected in this and other studies suggests that following domestication, wheat evolutionary processes involved many genomic changes. The Br gene did not show either genetic (co-localization with QTLs) or phenotypic association with threshability or yield components, suggesting independence of the respective loci. It is argued here that changes in spike threshability and agronomic traits (e.g. yield and its components) are the outcome of plant evolution under domestication, rather than the result of a protracted domestication process. Revealing the genomic basis of wheat domestication and evolution under domestication, and clarifying their inter-relationships, will improve our understanding of wheat biology and contribute to further crop improvement.

  1. ATTEMPT TO APPLY STABILIZED WHEAT GERM FOR BREAD SUPPLEMENTATION

    Directory of Open Access Journals (Sweden)

    Halina Gambuś

    2015-02-01

    Full Text Available The increased interest in rational nutrition causes, that from many years is observed a growing consumption of bread, and novel food supplemented with health promoting components. For the bread production in Poland mainly wheat and rye cake flours are used, depleted of a many valuable nutrients such as protein, dietary fibre, minerals and vitamins. Because of their unique chemical composition wheat germs are a particularly valuable resource, both for direct consumption and to enhance the nutritional value of food products. The aim of the study was to prepare wheat bread with a 10% addition of commercial stabilized wheat germs. Based on the obtained results, it was found that wheat germs, due to their unique chemical composition, were a particularly valuable resource to supplement the nutritional value of bread. However, germs had detrimental effect on mechanical properties of dough, and on bread quality. Texture of bread crumb and its chemical composition were analysed. It was shown, that germs subjected to fermentation process could be used in wheat bread production as dietary fibre and mineral compound supplement.

  2. Biophysical parameters in a wheat producer region in southern Brazil

    Science.gov (United States)

    Leivas, Janice F.; de C. Teixeira, Antonio Heriberto; Andrade, Ricardo G.; de C. Victoria, Daniel; Bolfe, Edson L.; Cruz, Caroline R.

    2014-10-01

    Wheat (Triticum aestivum) is the second most produced cereal in the world, and has major importance in the global agricultural economy. Brazil is a large producer of wheat, especially the Rio Grande do Sul state, located in the south of the country. The purpose of this study was to analyze the estimation of biophysical parameters - evapotranspiration (ET), biomass (BIO) and water productivity (WP) - from satellite images of the municipalities with large areas planted with wheat in Rio Grande do Sul (RS). The evapotranspiration rate was obtained using the SAFER Model (Simple Algorithm for Retrieving Evapotranspiration) on MODIS (Moderate Resolution Imaging Spectroradiometer) images taken in the agricultural year 2012. In order to obtain biomass and water productivity rates we applied the Monteith model and the ratio between BIO and ET. In the beginning of the cycle (the planting period) we observed low values for ET, BIO and WP. During the development period, we observed an increase in the values of the parameters and decline at the end of the cycle, for the period of the wheat harvest. The SAFER model proved effective for estimating the biophysical parameters evapotranspiration, biomass production and water productivity in areas planted with wheat in Brazilian Southern. The methodology can be used for monitoring the crops' water conditions and biomass using satellite images, assisting in estimates of productivity and crop yield. The results may assist the understanding of biophysical properties of important agro-ecosystems, like wheat crop, and are important to improve the rational use of water resources.

  3. New evidence for grain specific C4 photosynthesis in wheat.

    Science.gov (United States)

    Rangan, Parimalan; Furtado, Agnelo; Henry, Robert J

    2016-01-01

    The C4 photosynthetic pathway evolved to allow efficient CO2 capture by plants where effective carbon supply may be limiting as in hot or dry environments, explaining the high growth rates of C4 plants such as maize. Important crops such as wheat and rice are C3 plants resulting in efforts to engineer them to use the C4 pathway. Here we show the presence of a C4 photosynthetic pathway in the developing wheat grain that is absent in the leaves. Genes specific for C4 photosynthesis were identified in the wheat genome and found to be preferentially expressed in the photosynthetic pericarp tissue (cross- and tube-cell layers) of the wheat caryopsis. The chloroplasts exhibit dimorphism that corresponds to chloroplasts of mesophyll- and bundle sheath-cells in leaves of classical C4 plants. Breeding to optimize the relative contributions of C3 and C4 photosynthesis may adapt wheat to climate change, contributing to wheat food security. PMID:27530078

  4. Diagrammatic scale for the assessment of blast on wheat spikes

    Directory of Open Access Journals (Sweden)

    João Leodato Nunes Maciel

    2013-09-01

    Full Text Available The correct quantification of blast caused by the fungus Magnaporthe oryzae on wheat (Triticum aestivum spikes is an important component to understand the development of this disease aimed at its control. Visual quantification based on a diagrammatic scale can be a practical and efficient strategy that has already proven to be useful against several plant pathosystems, including diseases affecting wheat spikes like glume blotch and fusarium head blight. Spikes showing different disease severity values were collected from a wheat field with the aim of elaborating a diagrammatic scale to quantify blast severity on wheat spikes. The spikes were photographed and blast severity was determined by using resources of the software ImageJ. A diagrammatic scale was developed with the following disease severity values: 3.7, 7.5, 21.4, 30.5, 43.8, 57.3, 68.1, 86.0, and 100.0%. An asymptomatic spike was added to the scale. Scale validation was performed by eight people who estimated blast severity by using digitalized images of 40 wheat spikes. The precision and the accuracy of the evaluations varied according to the rater (0.82wheat spikes.

  5. Compositional Study for Improving Wheat Flour with Functional Ingredients

    Directory of Open Access Journals (Sweden)

    Livia Apostol

    2015-11-01

    Full Text Available Helianthus tuberosus L. is cultivated widely across for its edible tuber. As a source of inulin with aperient, cholagogue and tonic effects, its tubers have been used for the treatment of diabetes. Also, the leaves of Helianthus tuberosus L. show antipyretic, analgesic effects and are therefore used for the treatment of bone fracture, skin wound and pain. The main aim of this study is to establish the optimum dose from rheological and nutritional point of view of Helianthus tuberosus L. tuber flour and leaves flour used as functional ingredient in bakery products industry. The types of mixtures of flours used in this study was: P1–100% wheat flour; P2-93% wheat flour + 7% Helianthus tuberosus (5% tuber + 2% leaves; P3-92% wheat flour + 8% Helianthus tuberosus (5% tuber + 3% leaves; P4- 90% wheat flour + 10%  Helianthus tuberosus (5% tuber + 5% leaves; P5 -100% Helianthus tuber; P6- Helianthus leaves. The potential functional of wheat flour enriched with the Helianthus tuberosus, in different proportions, was evaluated concerning chemical composition and rheological behaviour of the doughs. Adding of the Helianthus tuberosus L. tuber and leaves provoked an effect increasing the levels of inulin, minerals and fiber in wheat flour. The rheological properties of dough showed that P2, kept the rheological parameters for the technological behavior in order to obtain an acceptable quality of the bakery products. 

  6. EFFECT OF PLANTITNG PATTERN OF WINTER WHEAT ON AGRODIVERSITY

    Directory of Open Access Journals (Sweden)

    Моskalets Т. Z.

    2015-08-01

    Full Text Available We studied the introductions of cultivars and lines of wheat soft winter wheat that are adaptive to specific physical and climatic conditions ecotopes regards forest-steppe and Polissia ecotypes by ecological and biological characteristics. We also determined their influence on formation of the diversity and productivity of agricultural ecosystems. It was established that mosaic planting pattern of winter wheat allows to get a high yield (up to 9 t/ha and of strong and superstrong wheat (Ariivka, L 4696/96, KC-5, KC-7, KC-14, KC-22, Yuvivata 60, etc. in comparison to monocultivar technology. Some genotypes, namely Yuvivata 60, Ariiivka KC-22, KC-7 have moderate and high resistance towards complex diseases. The mosaic planting pattern of cultivars is the important factor of increasing the diversity and strengthening the links in agricultural ecosystems. Based on the long-term ecological research of genetic forms of winter soft wheat in different ecotopes and comparing them by major agronomic features with cultivar-standards we selected some promising cultivars and lines. We suggested the semi dwarf, medium-grown productive, and high adaptive genotypes of wheat soft winter, like Prydesnianska, Ariiivka, Nosshpa 100, КС-5, КС-7, КС-14, КС-21, КС-22, Yuvivata 60, Zoriana Nosivska, КС-16, КС-17, Л9646/96.

  7. The role of Aegilops species in the origin and improvement of common wheat

    Directory of Open Access Journals (Sweden)

    Roman Prażak

    2014-01-01

    Full Text Available Some Aegilops species participated in wheat evolution playing a major role in wheat domestication and therefore the genus Aegilops represents a big part of the additional gene pool determining important traits of wheat. Breeders have been using these genes for many years to produce improved cultivars. Wide crosses between its wild relatives are sources of desirable characteristics for genetic improvement of common wheat. Triticum aestivum evolution and methods for transfer of alien material into wheat, briefly reviewed in this article, include incorporation of the whole genomes, single chromosomes, small chromosomal segments, single genes and cytoplasm substitution in wheat.

  8. Molecular characterization and functional analysis of elite genes in wheat and its related species

    Indian Academy of Sciences (India)

    Jirui Wang; Pengfei Qi; Yuming Wei; Dengcai Liu; George Fedak; Youliang Zheng

    2010-12-01

    The tribe Triticeae includes major cereal crops (bread wheat, durum wheat, triticale, barley and rye), as well as abundant forage and lawn grasses. Wheat and its wild related species possess numerous favourable genes for yield improvement, grain quality enhancement, biotic and abiotic stress resistance, and constitute a giant gene pool for wheat improvement. In recent years, significant progress on molecular characterization and functional analysis of elite genes in wheat and its related species have been achieved. In this paper, we review the cloned functional genes correlated with grain quality, biotic and abiotic stress resistance, photosystem and nutrition utilization in wheat and its related species.

  9. QTL for leaf blotch resistance in spring wheat, and a method to inoculate wheat seedlings with Stagonospora nodorum

    OpenAIRE

    Ruud, Anja Karine

    2013-01-01

    Leaf blotch diseases caused by Stagonospora nodorum, Septoria tritici and Pyrenophora tritici-repentis are important foliar diseases in wheat. The inheritance of resistance to these diseases appears to be quantitative, but recent research indicates that several host-specific interactions are involved. In this thesis, quantitative resistance was evaluated on a doubled haploid spring wheat population derived from a cross between Arina × NK93604. Adult plant resistance to leaf blo...

  10. Ancestral QTL alleles from wild emmer wheat improve grain yield, biomass and photosynthesis across enviroinments in modern wheat.

    Science.gov (United States)

    Merchuk-Ovnat, Lianne; Fahima, Tzion; Krugman, Tamar; Saranga, Yehoshua

    2016-10-01

    Wild emmer wheat (Triticum turgidum ssp. dicoccoides) is considered a promising source for improving drought resistance in domesticated wheat. Nevertheless, wild germplasm has not been widely used in wheat breeding for abiotic stress resilience. In the current study, a near isogenic line NIL-7A-B-2, introgressed with a drought-related QTL from wild emmer wheat on chromosome 7A, and its recurrent parent, bread wheat cv. BarNir, were investigated under four environments across 2 years-water-limited and well-watered conditions in a rain-protected screen-house (Year 1) and two commercial open field plots under ample precipitation (Year 2). NIL-7A-B-2 exhibited an advantage over BarNir in grain yield and biomass production under most environments. Further physiological analyses suggested that enhanced photosynthetic capacity and photochemistry combined with higher flag leaf area are among the factors underlying the improved productivity of NIL-7A-B-2. These were coupled with improved sink capacity in NIL-7A-B-2, manifested by greater yield components than its parental line. This study provides further support for our previous findings that introgression of wild emmer QTL alleles, using marker assisted selection, can enhance grain yield and biomass production across environments in domesticated wheat, thereby enriching the modern gene pool with essential diversity for the improvement of yield and drought resistance. PMID:27593460

  11. Winter Wheat Row Spacing and Alternative Crop Effects on Relay-Intercrop, Double-Crop, and Wheat Yields

    Directory of Open Access Journals (Sweden)

    Leah Sandler

    2015-01-01

    Full Text Available In Missouri as well as much of the Midwest, the most popular double-cropping system was winter wheat (Triticum aestivum L. followed by soybean (Glycine max (L. Merr. These two crops can also be used in an intercrop system, but optimal row spacing was important to increase crop productivity. Research was conducted to evaluate (1 winter wheat inter- and double-crop production systems, using a variety of alternative crops, and (2 the impact of different wheat row spacings on intercrop establishment and yields within the various cropping systems. Field research was conducted during droughts in 2012 and 2013. Spacing of wheat rows impacted wheat yields by 150 kg ha−1, as well as yields of the alternative crops. Narrower row spacings (150 kg ha−1 and the double-crop system (575 kg ha−1 increased yield due to the lack of interference for resources with wheat in 2013. Land equivalent ratio (LER values determining productivity of intercrop systems of 19 and 38 cm row showed an advantage for alternative crops in 2013, but not 2012. This signified that farmers in Northeast Missouri could potentially boost yield potential for a given field and produce additional forage or green manure yields in a year with less severe drought.

  12. [Effects of different fertilization regimes on weed communities in wheat fields under rice-wheat cropping system].

    Science.gov (United States)

    Yuan, Fang; Li, Yong; Li, Fen-hua; Sun, Guo-jun; Han, Min; Zhang, Hai-yan; Ji, Zhong; Wu, Chen-yu

    2016-01-01

    To reveal the effects of different fertilization regimes on weed communities in wheat fields under a rice-wheat rotation system, a survey was conducted before wheat harvest in 2014 after a 4-year long-term recurrent fertilization scheme. Weed species types, density, height and diversity index under different fertilization and straw-returning schemes in wheat fields were studied and complemented with a canonical correspondence analysis on weed community distribution and soil nutrient factors. Twenty weed species were recorded among 36 wheat fields belonging to 19 genera and 11 families. Beckmannia syzigachne, Hemistepta lyrata, Malachium aquaticum and Cnidium monnieri were widely distributed throughout the sampled area. Long-term fertilization appeared to reduce weed species richness and density, particularly for broadleaf weeds, but increased weed height. Diversity and evenness indices of weed communities were lower and dominance indices were higher in fields where chemical fertilizers were applied alone or combined with organic fertilizers, especially, where organic-inorganic compound fertilizer was used, in which it readily caused the outbreak of a dominant species and severe damage. Conversely, diversity and evenness indices of weed communities were higher and dominance indices were lower when the straw was returned to the field combined with chemical or organic fertilizers, in which weed community structures were complex and stable with lower weed density. Under these conditions weeds only caused slight reduction of wheat growth. PMID:27228601

  13. [Effects of different fertilization regimes on weed communities in wheat fields under rice-wheat cropping system].

    Science.gov (United States)

    Yuan, Fang; Li, Yong; Li, Fen-hua; Sun, Guo-jun; Han, Min; Zhang, Hai-yan; Ji, Zhong; Wu, Chen-yu

    2016-01-01

    To reveal the effects of different fertilization regimes on weed communities in wheat fields under a rice-wheat rotation system, a survey was conducted before wheat harvest in 2014 after a 4-year long-term recurrent fertilization scheme. Weed species types, density, height and diversity index under different fertilization and straw-returning schemes in wheat fields were studied and complemented with a canonical correspondence analysis on weed community distribution and soil nutrient factors. Twenty weed species were recorded among 36 wheat fields belonging to 19 genera and 11 families. Beckmannia syzigachne, Hemistepta lyrata, Malachium aquaticum and Cnidium monnieri were widely distributed throughout the sampled area. Long-term fertilization appeared to reduce weed species richness and density, particularly for broadleaf weeds, but increased weed height. Diversity and evenness indices of weed communities were lower and dominance indices were higher in fields where chemical fertilizers were applied alone or combined with organic fertilizers, especially, where organic-inorganic compound fertilizer was used, in which it readily caused the outbreak of a dominant species and severe damage. Conversely, diversity and evenness indices of weed communities were higher and dominance indices were lower when the straw was returned to the field combined with chemical or organic fertilizers, in which weed community structures were complex and stable with lower weed density. Under these conditions weeds only caused slight reduction of wheat growth.

  14. Ancient DNA from 8400 Year-Old Catalhoyuk Wheat: Implications for the Origin of Neolithic Agriculture.

    Directory of Open Access Journals (Sweden)

    Hatice Bilgic

    Full Text Available Human history was transformed with the advent of agriculture in the Fertile Crescent with wheat as one of the founding crops. Although the Fertile Crescent is renowned as the center of wheat domestication, archaeological studies have shown the crucial involvement of Çatalhöyük in this process. This site first gained attention during the 1961-65 excavations due to the recovery of primitive hexaploid wheat. However, despite the seeds being well preserved, a detailed archaeobotanical description of the samples is missing. In this article, we report on the DNA isolation, amplification and sequencing of ancient DNA of charred wheat grains from Çatalhöyük and other Turkish archaeological sites and the comparison of these wheat grains with contemporary wheat species including T. monococcum, T. dicoccum, T. dicoccoides, T. durum and T. aestivum at HMW glutenin protein loci. These ancient samples represent the oldest wheat sample sequenced to date and the first ancient wheat sample from the Middle East. Remarkably, the sequence analysis of the short DNA fragments preserved in seeds that are approximately 8400 years old showed that the Çatalhöyük wheat stock contained hexaploid wheat, which is similar to contemporary hexaploid wheat species including both naked (T. aestivum and hulled (T. spelta wheat. This suggests an early transitory state of hexaploid wheat agriculture from the Fertile Crescent towards Europe spanning present-day Turkey.

  15. Fourier Transform Infrared Spectroscopic Studies Of Wheat In The Mid Infrared

    Science.gov (United States)

    Olinger, Jill M.; Griffiths, Peter R.

    1989-12-01

    Official grain standards of the United States state that wheat may be divided into seven classes which are: Durum, Red Durum, Hard Red Spring, Hard Red Winter, Soft Red Winter, White, and Mixed.1 Most end uses of wheat involve converting the grain into flour through one of a variety of grinding methods. The quality of wheat-based products is often very dependent upon the type or class of wheat which was used to make the flour. Pasta products, for example, are made almost exclusively from the flour of durum wheats, which are the hardest of the wheats listed above. The highest quality breads are produced using flour from wheats classed as hard, whereas cakes, cookies and pastries are considered best when flour from wheats classed as soft are used. It is obvious then that the capability of determining the class of a particular wheat, especially with respect to hardness, is of economic importance to growers, processors, and merchants of wheat and wheat products. Hardness has been measured in many different ways 2-5 but, as of yet, no one method has become the method of choice. This paper reports on the use of principal components analysis (PCA) of mid infrared diffuse reflectance (DR) spectra of diluted ground wheats to aid in the classification of those wheats with respect to their hardness. The theory and mathematics involved in a principal component analysis have been described elsewhere.9

  16. Gene expression profiling during asexual development of the late blight pathogen Phytophthora infestans reveals a highly dynamic transcriptome

    NARCIS (Netherlands)

    Judelson, H.S.; Ah-Fong, A.M.V.; Aux, G.; Avrova, A.O.; Bruce, C.; Cakir, C.; Cunha, da L.; Grenville-Briggs, L.; Latijnhouwers, M.; Ligterink, W.; Meijer, H.J.G.; Roberts, S.; Thurber, C.S.; Whisson, S.C.; Birch, P.R.J.; Govers, F.; Kamoun, S.; West, van P.; Windass, J.

    2008-01-01

    Much of the pathogenic success of Phytophthora infestans, the potato and tomato late blight agent, relies on its ability to generate from mycelia large amounts of sporangia, which release zoospores that encyst and form infection structures. To better understand these stages, Affymetrix GeneChips bas

  17. Analysis of Large Genomic Data in Silico: The EPICNorfolk Study of Obesity

    DEFF Research Database (Denmark)

    Zhao, Jing Hua; Luan, Jian'an; Tan, Qihua;

    In human genetics, large-scale data are now available with advances in genotyping technologies and international collaborative projects. Our ongoing study of obesity involves Affymetrix 500k genechips on approximately 7000 individuals from the European Prospective Investigation of Cancer (EPIC...

  18. Gene Expression Profiling and Functional Analysis of Spore Germination in Fusarium graminearum

    Science.gov (United States)

    A full genome study on conidia and ascospores has been carried out using F. graminearum Affymetrix GeneChips to compare gene expression during germination in complete medium at 0, 2, 8, 24 hours and after 10 days of drought stress. The total number of genes detected in at least one time point was si...

  19. Genome-wide Gene Expression Analysis of Mucosal Colonic Biopsies and Isolated Colonocytes Suggests a Continuous Inflammatory State in the Lamina Propria of Patients with Quiescent Ulcerative Colitis

    DEFF Research Database (Denmark)

    Bjerrum, Jacob Tveiten; Hansen, Morten; Olsen, Jørgen;

    2010-01-01

    syndrome (controls, n = 10). After isolation of colonocytes and subsequent extraction of total RNA, GWGE data were acquired using Human Genome U133 Plus 2.0 GeneChip Array (Affymetrix, Santa Clara, CA). Data analysis was carried out by principal component analysis and projection to latent structure...

  20. Extraction of high-quality epidermal RNA after ammonium thiocyanate-induced dermo-epidermal separation of 4 mm human skin biopsies

    DEFF Research Database (Denmark)

    Clemmensen, Anders; Thomassen, Mads; Clemmensen, Ole;

    2009-01-01

    , and satisfactory amounts of high-quality RNA were obtained. Hybridization to Affymetrix HG_U133A 2.0 GeneChips showed that ammonium thiocyanate incubation had a minute effect on gene expression resulting in only one significantly downregulated gene (cystatin E/M). We conclude that epidermis can be reproducibly...

  1. Characterizing the porcine transcriptional regulatory response to infection by Salmonella: identifying putative new NFkB direct targets through comparative bioinformatics.

    Science.gov (United States)

    We have collected data on host response to infection from RNA prepared from mesenteric lymph node of swine infected with either Salmonella enterica serovar Typhimurium (ST) or S. Choleraesuis (SC) using the porcine Affymetrix GeneChip. We identified 848 (ST) and 1,853 (SC) genes with statistical evi...

  2. Pollen flow of wheat under natural conditions in the Huanghuai River Wheat Region, China.

    Science.gov (United States)

    Sun, Ai-Qing; Zhang, Chun-Qing; Wu, Cheng-Lai; Gao, Qing-Rong

    2015-01-01

    The transgenic pollen spread is the main pathway of transgenic plant gene flow. The maximum distance of pollen dispersal (horizontal), the spatial dynamics of pollen movement (vertical), and the patterns of pollen dispersal are important considerations in biosafety assessments of genetically modified crops. To evaluate wheat (Triticum aestivum) pollen dispersal, we measured the pollen suspension velocity and analyzed pollen dispersal patterns under natural conditions in the Huanghuai River wheat-growing region in 2009. The pollen suspension velocity was 0.3-0.4 m/s. The highest pollen densities were detected in the north, northwest, and south of the pollen source. Pollen was dispersed over distances greater than 245 m in the northwest and northeast directions. At the pollen source center, pollen density decreased with increasing vertical height. In the north of the pollen source, the pollen density from 65 m to 225 m showed a wave-mode decrease with increasing height. The horizontal transport of pollen over longer distances fitted polynomial equations. In the north, the pollen density was highest at 45 m from the pollen source, and decreased with increasing distance. In the northwest, the pollen density showed a double-peak trend. In the northeast, pollen density was highest from 45 m to 125 m from the source. Wind speeds greater than the pollen suspension velocity and the duration of continuous gusts were the main factors affecting pollen dispersal. This information will be useful for determining the spatial isolation distances for hybrid seed production and for the commercial production of transgenic wheat. PMID:25658025

  3. Structural development of aleurone and its function in common wheat.

    Science.gov (United States)

    Xiong, Fei; Yu, Xu-Run; Zhou, Liang; Wang, Zhong; Wang, Feng; Xiong, Ai-Sheng

    2013-12-01

    The wheat aleurone is formed from surface endosperm cells, and its developmental status reflects its biogenesis, structural characteristics, and physiological functions. In this report, wheat caryopses at different development stages were embedded in Spurr's low-viscosity embedding medium for observation of the development of aleurone cells (ACs) by light microscopy, scanning electron microscopy, and fluorescence microscopy, respectively. According to their structures and physiological characterization, the ACs development process was divided into five stages: endosperm cellulization, spherosome formation, aleurone grain formation, filling material proliferation, and maturation. Furthermore, ACs in different parts of the caryopsis formed differently. ACs near the vascular bundle developed earlier and formed transfer cells, but other ACs formed slowly and did not form transfer cells. ACs on the caryopsis backside were a regular square shape; however, ACs in the caryopsis abdomen were mainly irregular. There were also differences in development between wheat varieties. ACs were rectangular in hard wheat but square in soft wheat. ACs were larger and showed a greater degree of filling in hard compared to soft wheat. The storage materials in ACs were different compared to inner endosperm cells (IECs). The concentrations of minerals such as sodium, magnesium, silicon, phosphorus and potassium were higher in ACs than in IECs. ACs contained many aleurone grains and spherosomes, which store lipids and mineral nutrients, respectively. The cell nucleus did not disappear and the cells were still alive during aleurone maturation. However, IECs were dead and mainly contained amyloplast and protein bodies, which store starch and protein, respectively. Overall, the above results characterized major structural features of aleurone and revealed that the wheat aleurone has mainly four functions.

  4. A Knowledge Model System for Wheat Production Management

    Institute of Scientific and Technical Information of China (English)

    ZHU Yan; CAO Wei-Xing; DAI Ting-Bo; TIAN Yong-Chao; YAO Xia

    2007-01-01

    A knowledge model with temporal and spatial characteristics for the quantitative design of a cultural pattern in wheat production,using systems analysis and dynamic modeling techniques,was developed for wheat management,as a decision-making tool in digital farming.The fundamental relationships and algorithms of wheat growth indices and management criteria to cultivars,ecological environments,and production levels were derived from the existing literature and research data to establish a knowledge model system for quantitative wheat management using Visual C++.The system designed a cultural management plan for general management guidelines and crop regulation indices for timecourse control criteria during the wheat-growing period.The cultural management plan module included submodels to determine target grain yield and quality,cultivar choice,sowing date,population density,sowing rate,fertilization strategy,and Water management,whereas the crop regulation indices module included submodels for suitable development stages,dynamic growth indices,source-sink indices,and nutrient indices.Evaluation of the knowledge model by design studies on the basis of data sets of different eco-sites,cultivars,and soil types indicated a favorable performance of the model system in recommending growth indices and management criteria under diverse conditions.Practical application of the knowledge model system in comparative field experiments produced yield gains of 2.4%to 16.5%.Thus,the presented knowledge model system overcame some of the difficulties of the traditional wheat management patterns and expert systems,and laid a foundation for facilitating the digitization of wheat management.

  5. Price Conduction Mechanism of China’s Wheat Industry Chain Based on VECM

    Institute of Scientific and Technical Information of China (English)

    Haiyan; ZHU

    2015-01-01

    With the aid of the VECM( vector error correction model),this paper studied dynamic effect of wheat price and flour price conduction mechanism in the wheat industry chain. Study results indicate that in a long term,wheat price and flour price have equilibrium relationship. Through threshold co-integration test,it found that there is no threshold co-integration relationship between wheat price and flour price.This can be adjusted using the linear error correction mode. In a short term,the wheat price and flour price have Granger causality relationship. When the price deviates from equilibrium state,the flour price can be adjusted and regressed to equilibrium state,but the speed of wheat price regressing to equilibrium state is slow. Finally,the impulse response function analysis indicates that fluctuation of the wheat price can bring huge and sustained impact to wheat and flour market.

  6. Examining the Potential of Plasma-Assisted Pretreated Wheat Straw for Enzyme Production by Trichoderma reesei

    DEFF Research Database (Denmark)

    Rodríguez Gómez, Divanery; Lehmann, Linda Olkjær; Schultz-Jensen, Nadja;

    2012-01-01

    Plasma-assisted pretreated wheat straw was investigated for cellulase and xylanase production by Trichoderma reesei fermentation. Fermentations were conducted with media containing washed and unwashed plasma-assisted pretreated wheat straw as carbon source which was sterilized by autoclavation...

  7. Mapping QTLs for Yield Stability in Durum Wheat Grown under Different Water Regimes

    Institute of Scientific and Technical Information of China (English)

    M.C. Sanguineti; A. E1-Ahmed; I. Elouafi; F. Maalouf; V. Martos; M.M. Nachit; N.Nserallah; H. Ouabbou; Y. Rharrabti; S. Rhouma; C. Royo; M. Maccaferri; A. Slama; D. Villegas; R. Tuberosa; E. Natoli; J.L. Araus-Ortega; M.B. Salem; J.Bort; E. de Ambrogio; L.F.G. del Moral; A. de Montis

    2007-01-01

    @@ Among the most important Mediterranean annual crops, durum wheat is widely grown in drought-prone areas. Therefore, improving water-use efficiency (WUE) of durum wheat represents a major breeding goal.

  8. Evaluation of Genetic Diversity in Wild Diploid Wheat Triticum boeoticum from Iran Using AFLP Markers

    Institute of Scientific and Technical Information of China (English)

    M.R. Naghavi; M. Malaki; H. Alizadeh; M. Mardi; Fakhre-Tabatabaei

    2007-01-01

    @@ Although Iran is a main center of distribution of wild wheats, but little information is available regarding genetic variation in wild wheat relatives from this country (Tabatabaei and Massoumi, 2001).

  9. Tailoring wheat management to ENSO phases for increased wheat production in Paraguay

    Directory of Open Access Journals (Sweden)

    Melissa A. Ramirez-Rodrigues

    2014-01-01

    Full Text Available Reported regional wheat yields in Paraguay vary from 1 to 3 t/ha from year to year, but appear not to be correlated with El Niño-Southern Oscillation (ENSO phases. Historical weather data from two locations in representative wheat-growing regions of Paraguay, Encarnación-Itapúa and Ciudad del Este-Alto Paraná combined with crop modeling, were analyzed to optimize nitrogen (N fertilizer application rates according to the ENSO phase of a growing season. The ENSO phase of a growing season was defined based on the average of the sea surface temperature (SST anomalies in the Eastern Equatorial Pacific region for the period June–October using the El Niño region 3.0 index (Niño 3.0. Simulated average yields in Alto Paraná were higher in the drier and cooler La Niña wheat-growing seasons (average of 3.5 t/ha compared to the other phases (average of 3.2 t/ha and in Itapúa, in Neutral seasons (average of 3.8 t/ha compared to the other phases (average of 3.7 t/ha. Accordingly, optimal N fertilizer applications ranged between 20 and 60 kg N/ha between phases depending on the sowing date, soil type and initial amount of soil water content. Applying an ENSO or General Circulation Model (GCM-based forecast for ENSO-season-type specific N fertilizer applications resulted in benefits of >100 US$/ha when compared with current farmers’ practice of consistently low N fertilizer applications in Paraguay. When N management based on forecasts was compared with optimized N application without forecast, the benefits of the forecast was only up to 8 US$/ha. The ENSO-persistence-based forecast showed higher values than the GCM-based forecasts with two lead-times but lower skill. Using climate information can significantly increase current wheat yields and gross margins in Paraguay by tailoring N fertilizer applications to the Niño 3.0-defined ENSO phases, which can be forecasted with moderate skill at the beginning of the growing season.

  10. Genetic variation in wheat germplasm for salinity tolerance atseedling stage: improved statistical inference

    OpenAIRE

    Hussain, Babar; KHAN, ABDUS SALAM; Ali, Zulfiqar

    2015-01-01

    Salinity is the major threat to global wheat production, particularly in arid and semiarid areas. Breeding salt-tolerant cultivars is one feasible solution, while the presence of genetic variation is a prerequisite for genetic improvement. To detect genetic variation for salt tolerance in wheat, a total of 150 wheat genotypes were tested for seedling-stage tolerance response at 300 mM NaCl in hydroponic culture. Significant differences (P ≤ 0.001) were identified in wheat for seedling ...

  11. De Novo Centromere Formation and Centromeric Sequence Expansion in Wheat and its Wide Hybrids

    OpenAIRE

    Xiang Guo; Handong Su; Qinghua Shi; Shulan Fu; Jing Wang; Xiangqi Zhang; Zanmin Hu; Fangpu Han

    2016-01-01

    Centromeres typically contain tandem repeat sequences, but centromere function does not necessarily depend on these sequences. We identified functional centromeres with significant quantitative changes in the centromeric retrotransposons of wheat (CRW) contents in wheat aneuploids (Triticum aestivum) and the offspring of wheat wide hybrids. The CRW signals were strongly reduced or essentially lost in some wheat ditelosomic lines and in the addition lines from the wide hybrids. The total loss ...

  12. Rust fungi on some poaceous weeds of wheat crops in Pakistan

    OpenAIRE

    NAJAM-UL-SEHAR AFSHAN*; ABDUL REHMAN NIAZI

    2013-01-01

    The article enlists common poaceous weeds found in wheat crop sand their specific parasitic rust fungi. In this study, four (04) plant taxa of Poaceae infected with rust fungi are collected from different wheat crops grown in different areas of Pakistan. The rust fungi are isolated, characterized and identified. All these host plants are known weeds of wheat crop in Pakistan. This work would help to identify and enlist the potential rust fungi on weeds of wheat crop that could be utilized to ...

  13. Impact of transgenic wheat with wheat yellow mosaic virus resistance on microbial community diversity and enzyme activity in rhizosphere soil.

    Directory of Open Access Journals (Sweden)

    Jirong Wu

    Full Text Available The transgenic wheat line N12-1 containing the WYMV-Nib8 gene was obtained previously through particle bombardment, and it can effectively control the wheat yellow mosaic virus (WYMV disease transmitted by Polymyxa graminis at turngreen stage. Due to insertion of an exogenous gene, the transcriptome of wheat may be altered and affect root exudates. Thus, it is important to investigate the potential environmental risk of transgenic wheat before commercial release because of potential undesirable ecological side effects. Our 2-year study at two different experimental locations was performed to analyze the impact of transgenic wheat N12-1 on bacterial and fungal community diversity in rhizosphere soil using polymerase chain reaction-denaturing gel gradient electrophoresis (PCR-DGGE at four growth stages (seeding stage, turngreen stage, grain-filling stage, and maturing stage. We also explored the activities of urease, sucrase and dehydrogenase in rhizosphere soil. The results showed that there was little difference in bacterial and fungal community diversity in rhizosphere soil between N12-1 and its recipient Y158 by comparing Shannon's, Simpson's diversity index and evenness (except at one or two growth stages. Regarding enzyme activity, only one significant difference was found during the maturing stage at Xinxiang in 2011 for dehydrogenase. Significant growth stage variation was observed during 2 years at two experimental locations for both soil microbial community diversity and enzyme activity. Analysis of bands from the gel for fungal community diversity showed that the majority of fungi were uncultured. The results of this study suggested that virus-resistant transgenic wheat had no adverse impact on microbial community diversity and enzyme activity in rhizosphere soil during 2 continuous years at two different experimental locations. This study provides a theoretical basis for environmental impact monitoring of transgenic wheat when the

  14. Soil chemicals properties and wheat genotype impact on micronutrient and toxic elements content in wheat integral flour

    Directory of Open Access Journals (Sweden)

    Krunoslav Karalić

    2012-02-01

    Full Text Available Aim To determine impact of soil chemical properties and different wheat genotypes in Croatia on micronutrient and toxic elements content in wheat integral flour. Methods Research was conducted and soil samples were collected from two different production areas in the Republic of Croatia: Ovčara and Dalj. Besides soil samples, grain samples of four different Croatian wheat genotypes were also collected and analyzed. In total, 40 samples of soil and 40 samples of wheat grain were analysed for total (aqua regia and plant available (EDTA extraction heavy metal content of Fe, Mn, Zn, Cu, Pb, Cd. Results Determined soil pHKCl ranged from 5.63 to 6.25 at Ovčara and from 6.95 to 7.37 at Dalj sampling sites. The highest total concentration of heavy metals in soil were determined for Fe, followed by Mn, Zn, Cu, Pb and the lowest total concentration wasrecorded for Cd. The highest EDTA concentrations in soil were determined for Mn, than followed by Fe, Cu, Pb, and the lowest EDTA concentration was recorded for Cd. The highest concentration in integral wheat flour was found for Fe, than lower for Mn, Zn, Cu, Pb and the lowest concentration was found for Cd. If consumers in Croatia used daily 203 g of bread made of integral flour, they would take 2.31 to 8.44 µg Cd daily, depending on soil and wheat genotype.Conclusion The analysed soil and winter wheat genotypes have significant impact on potential daily intake of toxic and essentialheavy metals by integral flour or bread.

  15. Immunoglobulin-E-binding epitopes of wheat allergens in patients with food allergy to wheat and in mice experimentally sensitized to wheat proteins

    Science.gov (United States)

    Sera were obtained from 39 patients suffering from food allergy to wheat. Balb/c mice were sensitized to gliadins or LTP1 by intraperitoneal immunizations. Continuous epitopes bound by IgE were delineated by the Pepscan technique. The response to reduced, alkylated LTP1 was compared to that of the n...

  16. Integration of first and second generation biofuels: Fermentative hydrogen production from wheat grain and straw

    NARCIS (Netherlands)

    Panagiotopoulos, I.A.; Bakker, R.R.C.; Vrije, de G.J.; Claassen, P.A.M.; Koukios, E.G.

    2013-01-01

    Integrating of lignocellulose-based and starch-rich biomass-based hydrogen production was investigated by mixing wheat straw hydrolysate with a wheat grain hydrolysate for improved fermentation. Enzymatic pretreatment and hydrolysis of wheat grains led to a hydrolysate with a sugar concentration of

  17. Initial Study on Applications of French wheat in Chinese Steamed Bread and Noodles

    Institute of Scientific and Technical Information of China (English)

    ZhouXiangqing; CaoJian; 等

    2000-01-01

    The physical-chemical properties of four kinds of French commercial wheat and its flour and its dough rheological properties were analyzed in more detail.The suitability of French wheat flour in Chinese traditional food products such as stesmed bread and noodle was preliminarily studied in order to get and spread more information on how to utilize French wheat in Chinese food.

  18. Initial Study on Applications of French Wheat in Chinese Steamed Bread and Noodles

    Institute of Scientific and Technical Information of China (English)

    Zhou Xiangqing; Cao Jian; Chen Fusheng; Zhao Renyong; Gu Xin; Wang Shu

    2000-01-01

    the physical-chemical properties of four kinds of French commercial wheat and its flour and its dough rheological properties were analyzed in more detail .The suitability of French wheat flour in Chinese traditional food products such as ste2med bread and noodle was preliminarily studied in order to get and spread more infomation on how to utilize French wheat in Chinese food.

  19. Phenolic Acids from Wheat Show Different Absorption Profiles in Plasma: A Model Experiment with Catheterized Pigs

    DEFF Research Database (Denmark)

    Nørskov, Natalja; Hedemann, Mette Skou; Theil, Peter Kappel;

    2013-01-01

    The concentration and absorption of the nine phenolic acids of wheat were measured in a model experiment with catheterized pigs fed whole grain wheat and wheat aleurone diets. Six pigs in a repeated crossover design were fitted with catheters in the portal vein and mesenteric artery to study the ...

  20. 7 CFR 810.2204 - Grades and grade requirements for wheat.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 7 2010-01-01 2010-01-01 false Grades and grade requirements for wheat. 810.2204... OFFICIAL UNITED STATES STANDARDS FOR GRAIN United States Standards for Wheat Principles Governing the Application of Standards § 810.2204 Grades and grade requirements for wheat. (a) Grades and grade...

  1. Temperature-mediated developmental delay may limit yield of cotton in relay intercrops with wheat

    NARCIS (Netherlands)

    Zhang, L.Z.; Werf, van der W.; Zhang, S.; Li, B.; Spiertz, J.H.J.

    2008-01-01

    In the Yellow River valley of China, more then 1.4 million ha of cotton are grown as relay intercrops with wheat. Cotton is sown in April when winter wheat is already in the reproductive phase; thus, a wheat crop with a fully developed canopy will compete for resources with cotton plants in the seed

  2. Sources of stem rust resistance in wheat-alien introgression lines

    Science.gov (United States)

    Stem rust, caused by Puccinia graminis f. sp. tritici, is one of the most devastating diseases of wheat and the novel highly virulent race of TTKSK and its lineage are threatening wheat production worldwide. The objective of the study was to identify new sources of resistance in wheat-alien introgre...

  3. Descriptive modelling to predict deoxynivalenol in winter wheat in the Netherlands

    NARCIS (Netherlands)

    Fels-Klerx, van der H.J.; Burgers, S.L.G.E.; Booij, C.J.H.

    2010-01-01

    Predictions of deoxynivalenol (DON) content in wheat at harvest can be useful for decision-making by stakeholders of the wheat feed and food supply chain. The objective of the current research was to develop quantitative predictive models for DON in mature winter wheat in the Netherlands for two spe

  4. Recent invasion of world-wide wheat growing areas by two aggressive strains of Puccinia striiformis

    DEFF Research Database (Denmark)

    Walter, Stephanie; Ali, Sajid; Justesen, Annemarie Fejer;

    2012-01-01

    The ever more frequent and severe large-scale epidemics of wheat yellow/stripe rust disease (caused by Puccinia striiformis) pose a severe threat to the world’s wheat production (Hovmøller et al. 2010). The onset of a new series of world-wide wheat yellow rust epidemics in 2000 has been linked...

  5. 40 CFR 406.40 - Applicability; description of the bulgur wheat flour milling subcategory.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 28 2010-07-01 2010-07-01 true Applicability; description of the bulgur wheat flour milling subcategory. 406.40 Section 406.40 Protection of Environment ENVIRONMENTAL... Wheat Flour Milling Subcategory § 406.40 Applicability; description of the bulgur wheat flour...

  6. 40 CFR 406.30 - Applicability; description of the normal wheat flour milling subcategory.

    Science.gov (United States)

    2010-07-01

    ... 40 Protection of Environment 28 2010-07-01 2010-07-01 true Applicability; description of the normal wheat flour milling subcategory. 406.30 Section 406.30 Protection of Environment ENVIRONMENTAL... Wheat Flour Milling Subcategory § 406.30 Applicability; description of the normal wheat flour...

  7. Physical, textural, and antioxidant properties of extruded waxy wheat bran snack utilizing several varieties of bran

    Science.gov (United States)

    Wheat represents a ubiquitous commodity and while industries valorize 10% of wheat bran, most of this antioxidant-rich byproduct gets discarded. The objective of this study was to incorporate wheat bran into an extruded snack. Bran varieties from hard red spring, white club Bruehl, and purple whea...

  8. Light interception and utilization in relay intercrops of wheat and cotton

    NARCIS (Netherlands)

    Zhang, L.; Werf, van der W.; Bastiaans, L.; Zhang, S.; Li, B.; Spiertz, J.H.J.

    2008-01-01

    In China, a large acreage of cultivated land is devoted to relay intercropping of winter wheat and cotton. Wheat is sown in strips with interspersed bare soil in October and harvested in June of the next year, while cotton is sown in the interspersed paths in the wheat crop in April and harvested be

  9. Cadmium and zinc in saline soil solutions and their concentrations in wheat

    NARCIS (Netherlands)

    Khoshgoftarmanesh, A.H.; Shariatmadari, H.; Karimian, N.; Kalbasi, M.; Zee, van der S.E.A.T.M.

    2006-01-01

    Soil salinity and plant genotype may affect bioavailability of Cd and Zn to wheat. The aim of this study was to investigate the relationship between concentrations of Zn and Cd in saline soil solutions and in different wheat genotypes. A greenhouse experiment with four bread wheat genotypes (Triticu

  10. Introgression of FHB Resistance from Alien Species-Derived Lines into Spring Wheat

    Science.gov (United States)

    We have produced and collected over 300 wheat lines derived from the crosses of wheat with wild species related to wheat. Evaluation of these lines for reaction to Fusarium head blight (FHB) identified 74 lines with resistance comparable to “Sumai 3” in two greenhouse seasons. Most of the resistan...

  11. Evaluation of nitrogen uptake patterns in spring and winter wheat in western Oregon

    International Nuclear Information System (INIS)

    An understanding of the ground nitrogen (N) uptake pattern for wheat (Triticum aestivum L.) is essential to facilitate nitrogen management. The purpose of this study was to determine the nitrogen uptake pattern of spring and winter wheat grown in western Oregon, USA. Data used in this study were obtained from three different trials. For spring wheat rotation trials five spring wheat cultivars were used. Fertilizer N (16-16-16-4) at the rate of 140 kg ha/sup -1/ was applied at the time of planting. In small plot rotation trials five fertilizer treatments - 0, 50, 100,150 and 200 kg N ha/sup -1/ were used. Rotations include winter wheat following clover and winter wheat following oat. The N uptake and dry matter yield of winter wheat were also determined from unfertilized plots of wheat trial. The maximum N uptake for spring wheat and winter wheat were at 1100 and 2000 accumulated growing degree days (GDD), before Feekes 10, respectively. The maximum N uptake rate for spring wheat, 0.038 kg N GDD/sup -1/, occurred at 750 GDD and the peak N uptake was observed approximately 35 days after Feekes 2. Nitrogen uptake in winter wheat was significantly affected by rotations. (author)

  12. Fusarium spp. associated with head blight of wheat in South Africa

    Science.gov (United States)

    Fusarium head blight (FHB) of wheat is caused by numerous Fusarium species, including trichothecene-producers. In South Africa, FHB is mostly associated with irrigated wheat rotated with maize. Twenty symptomatic wheat heads were collected from four cultivars each in irrigated fields in the Northern...

  13. Biological control of take-all of wheat by fluorescent Pseudomonas spp. from China

    Science.gov (United States)

    Take-all disease of wheat caused by the soilborne fungus Gaeumannomyces graminis var. tritici (Ggt) is one of the most important root diseases of wheat worldwide. In order to find biocontrol agents, bacteria were isolated from wheat at different stages of development in Hebei and Jiangsu provinces i...

  14. Induction of defense gene homologues in wheat roots during interactions with pseudomonas fluorescens

    Science.gov (United States)

    Specific strains of Pseudomonas fluorescens directly inhibit soilborne fungal pathogens of Triticum aestivum (wheat) during colonization of the wheat rhizosphere, but until now the impact of these beneficial bacteria on wheat gene expression was unknown. To test the hypothesis that P. fluorescens i...

  15. Quantifying production potential of winter wheat in the North China Plain

    NARCIS (Netherlands)

    Wu, D.; Yu, Q.; Lu, C.; Hengsdijk, H.

    2006-01-01

    The North China Plain (NCP) is one of the major winter wheat (Triticum aestivum L.) producing areas in China. Current wheat yields in the NCP stabilize around 5 Mg ha¿1 while the demand for wheat in China is growing due to the increase in population and the change in diet. Since options for area exp

  16. Agrobacterium-Mediated Transformation of Bread and Durum Wheat Using Freshly Isolated Immature Embryos

    Science.gov (United States)

    Wu, Huixia; Doherty, Angela; Jones, Huw D.

    Agrobacterium-mediated transformation of wheat is becoming a viable alternative to the more established biolistic protocols. It offers advantages in terms of simple, low-copy-number integrations and can be applied with similar efficiencies to specific durum wheat and spring and winter bread wheat types varieties.

  17. New broad-spectrum resistance to septoria tritici blotch derived from synthetic hexaploid wheat

    NARCIS (Netherlands)

    Tabib Ghaffary, M.S.; Faris, J.D.; Friesen, T.L.; Visser, R.G.F.; Lee, van der T.A.J.; Robert, O.; Kema, G.H.J.

    2012-01-01

    Septoria tritici blotch (STB), caused by the ascomycete Mycosphaerella graminicola, is one of the most devastating foliar diseases of wheat. We screened five synthetic hexaploid wheats (SHs), 13 wheat varieties that represent the differential set of cultivars and two susceptible checks with a global

  18. POPULATION GENETICS OF THE WHEAT LEAF RUST FUNGUS, PUCCINIA TRITICINA IN CENTRAL ASIA

    Science.gov (United States)

    Wheat leaf rust, caused by Puccinia triticina, is a major disease of wheat in Central Asia. Single uredinial isolates from Armenia, Azerbaijan, Tajikistan, Kazakhstan, Uzbekistan, and Kyrgyzstan, 131 in total, were tested for virulence to 20 isolines of Thatcher wheat with single leaf rust resistan...

  19. The Variation and Stability Analysis of Wheat Dough Stability Time

    Institute of Scientific and Technical Information of China (English)

    TIAN Ji-chun; HU Rui-bo; DENG Zhi-ying; WANG Yan-xun

    2007-01-01

    Farinograph dough stability time is an important index for classifying wheat, and it often indicates the most appropriate end use for the wheat cultivars. This study aimed at the problem of large fluctuations in dough stability time that occurs during the commercial wheat production. The variations in the dough stability time and its consistency across locations and years were analyzed using 12 principal high-quality wheat cultivars (varieties) obtained from Shandong Province,China, which were grown at nine different locations for three successive years. The results showed that the coefficient of variation for the dough stability time ranged from 24.29 to 49.60% across different varieties, locations, and years. Additive main effects and multiplicative interaction (AMMI) analysis indicated that there were significant interactions for the dough stability time between the varieties, the growth locations, and the years. The genotype effect was the most noticeable, followed by the interaction of the genotype and the environment. The environmental effect was the least significant. The interactions between the varieties and the locations differ considerably, however, each cultivar (variety) apparently has a specific adaptability to the growth location. Therefore, for the successful commercial scale production of the high-quality wheat varieties, both the selection of proper cultivars and its most suitable growth locations to meet the desired requirements for the dough mixing stability time are important.

  20. Phenotyping for drought adaptation in wheat using physiological traits.

    Science.gov (United States)

    Monneveux, Philippe; Jing, Ruilian; Misra, Satish C

    2012-01-01

    Wheat (Triticum spp) is one of the first domesticated food crops. It represents the first source of calories (after rice) and an important source of proteins in developing countries. As a result of the Green Revolution, wheat yield sharply increased due to the use of improved varieties, irrigation, pesticides, and fertilizers. The rate of increase in world wheat production, however, slowed after 1980, except in China, India, and Pakistan. Being adapted to a wide range of moisture conditions, wheat is grown on more land area worldwide than any other crop, including in drought prone areas. In these marginal rain-fed environments where at least 60 m ha of wheat is grown, amount and distribution of rainfall are the predominant factors influencing yield variability. Intensive work has been carried out in the area of drought adaptation over the last decades. Breeding strategies for drought tolerance improvement include: definition of the target environment, choice and characterization of the testing environment, water stress management and characterization, and use of phenotyping traits with high heritability. The use of integrative traits, facilitated by the development and application of new technologies (thermal imaging, spectral reflectance, stable isotopes) is facilitating high throughput phenotyping and indirect selection, consequently favoring yield improvement in drought prone environments. PMID:23181021

  1. [Morphology of wheat roots under low-phosphorus stress].

    Science.gov (United States)

    Sun, Haiguo; Zhang, Fusuo

    2002-03-01

    The morphology of root systems of different wheat (Triticum aestivum L.) genotypes under low-phosphorus stress were studied to determine the effects of external factors on components of root system and the early morphological indicators related to phosphorus efficiency. The number of root axes and the length of lateral root of P-deficient plant were significantly lower than those of P-sufficient plant. The length of root axis and root system, and the number of lateral roots were sharply increased under low-P stress. The number and length of root axis were significantly different under different levels of phosphorus supply and among different wheat genotypes under same phosphorus supply. This implied that the two traits (number and length of root axis) were controlled by genotype and external factors. The difference in the characteristics of lateral root of the given wheat genotypes was significant only between different levels of P supply. It showed that the traits of lateral root mainly depended on external factors. The length and number of root axis, root length, and root angle were significantly different among 6 wheat genotypes. There exited significant linear relationships between relative grain yield and the interaction of the morphological traits, and it implied that the traits could be used as early indicators of selecting high P-efficiency wheat varieties.

  2. Use of radiation to transfer alien chromosome segments to wheat

    International Nuclear Information System (INIS)

    Ionizing radiation can accomplish the transfer of genetic information from species so distantly related to wheat (Triticum aestivum L. em Thell.) that their chromosomes pair very little, if at all, with those of wheat, even in the absence of the homoeologous-pairing suppressor Ph1. In a successful transfer, the alien segment must almost always replace a homoeologous wheat segment, but radiation induces translocations largely at random; therefore automatic selection in favor of desirable translocations must be provided if the size of the project is to be kept within reasonable limits. Pollen selection will occur if seeds or plants monosomic for both an alien chromosome and one of its wheat homoeologues are irradiated. Making the plants also deficient for Ph1 may increase the number of suitable transfers. High-frequency occurrence of the desired alien character in M2 head-rows from plants grown from irradiated seed can identify favorable transfers with little cytological work. Irradiation of plants shortly before meiosis, using them to pollinate ditelosomics or double ditelosomics for the wheat arm or chromosome concerned, and cytologically examining offspring which have the alien character can not only identify the desirable transfers, but also reveal the lengths of the alien segments involved

  3. Residue analysis and dissipation of monosulfuron in soil and wheat

    Institute of Scientific and Technical Information of China (English)

    FAN Zhi-jin; HU Ji-ye; AI Ying-wei; QIAN Chuan-fan; YU Wei-qiang; LI Zheng-ming

    2004-01-01

    HPLC-UV residue analytical method for monosulfuron [N-[(4'-methyl) pyrimidin-2'-yl]-2-nitrophenylsulfonyl urea] in soil and wheat was developed. Monosulfuron residues were recovered by solvent extraction, followed by liquid-liquid partition, and C18 column clean-up. Excellent method recoveries ranging from 95%-104% for both fortified soil and wheat grain were obtained with coefficients of variation 1.5%-11.8%. The minimum detectable quantities in soil and wheat were both 4 ng, the limit of detection was 0.02 mg/kg. When monosulfuron was applied according to double dosage of maximum recommended use direction(120 g ai/hm2 of 10% monosulfuron wettable powder sprayed for once during development of wheat) in field studies conducted in Shandong Province and near Beijing, monosulfuron residues was not detected in soil and wheat samples collected 75 d after application. Laboratory soil degradation studies showed that monosulfuron degraded faster in acidic soil and strong alkaline soil than in neutral or weak alkaline soil. Half lives in Jiangxi soil, Shijiazhuang soil, Jiangsu soil and Heilongjiang soil were 41, 48, 87 and 84 d respectively. Monosulfuron residues dissipated rapidly in Shandong and Beijing field test sites with half-lives of less than 14 d.

  4. Important macro and micro elements of wheat and rice

    International Nuclear Information System (INIS)

    Important macro- and micro-elements of different genotypes of wheat and rice were studied. Highest amounts (mg/100g) of macro-elements (Na, K, Ca, Mg and P) were recorded in Iqbal-99 (26.23), Shahkar-95 (680.79), Pasban-90 (85.5), Auqab-99 (199.2) and MH-97 (279.27) wheat cultivars respectively; and in NIAB-Irri-9 (15.10), EF-25-14-98 (270.85), EF-30-1-97A (39.01), Irri-6 (34.94) and Basmati-Pak (246.20) rice genotypes, respectively. Maximum concentrations (mg/100g) of Fe, Zn, Mn and Cu were found in Auqab-99 (4.87), Rahtas-90 (3.55), Auqab-99 (2.49), and Punjab-96 and Kohistan-97 (0.69) wheat varieties, respectively; and in DM-25-11-96 (5.72), EF-25-14-98 (3.27), EF-35-2-98 (0.79) and Basmati-370 and BC-L-68 (0.41) rice genotypes, respectively. Correlations between protein content and different minerals in wheat and rice were not significant. Coefficient of variability (CV, %) in different elements varied from 3.24 (Mn) to 25.74 (Ca) in wheat and from 6.11 (P) to 18.15 (Ca) in rice. The superiority of field fortification of staples for minerals over that of post harvest addition is discussed. (author)

  5. Effects of benzoic acid and cadmium toxicity on wheat seedlings

    Directory of Open Access Journals (Sweden)

    Kavita Yadav

    2013-06-01

    Full Text Available Benzoic acid (BA and Cd exhibit cumulative effects on plants due to their accumulation in the soil. The present study reports the effects of BA an allelochemical, Cd and their combinations on seed germination, seedling growth, biochemical parameters, and response of antioxidant enzymes in Triticum aestivum L. The experiment was conducted in sand supplemented with Hoagland nutrient solution. Benzoic acid was applied at concentrations of 0.5, 1.0, and 1.5 mM with or without Cd (7 mg L-1 to observe effects of allelochemical and Cd alone and in combination on wheat. Both stresses exhibited inhibitory effect on growth and metabolism of wheat seedlings. The allelochemical in single and combined treatments with Cd decreased seedling growth as compared to Cd stress. The two stresses significantly enhanced malondialdehyde content of wheat seedlings. The activity of other antioxidant enzymes, viz. superoxide dismutase (SOD, catalase (CAT, ascorbate peroxidase (APX, and guaiacol peroxidase (POX were also recorded. SOD increased in seedlings under the two stresses. CAT more prominently ameliorates the toxic effects of H2O2 as compared with APX and POX and protected wheat seedlings from oxidative stress. Allelochemical buttressed the toxic effect of Cd on wheat seedlings.

  6. Phenotyping for drought adaptation in wheat using physiological traits

    Directory of Open Access Journals (Sweden)

    Philippe eMonneveux

    2012-11-01

    Full Text Available Wheat (Triticum spp is one of the first domesticated food crops. It represents the first source of calories (after rice and an important source of proteins in developing countries. As a result of the Green Revolution, wheat yield sharply increased due to the use of improved varieties, irrigation, pesticides and fertilizers. The rate of increase in world wheat production however slowed after 1980, except in China, India and Pakistan. Being adapted to a wide range of moisture conditions, wheat is grown on more land area worldwide than any other crop, including in drought prone areas. In these marginal rain-fed environments where at least 60m ha of wheat is grown, amount and distribution of rainfall are the predominant factors influencing yield variability. Intensive work has been carried out in the area of drought adaptation over the last decades. Breeding strategies for drought tolerance improvement include: definition of the target environment, choice and characterisation of the testing environment, water stress management and characterization, and use of phenotyping traits with high heritability. The use of integrative traits, facilitated by the development and application of new technologies (thermal imaging, spectral reflectance, stable isotopes is facilitating high throughput phenotyping and indirect selection, consequently favoring yield improvement in drought prone environments.

  7. Super Dwarf Wheat for Growth in Confined Spaces

    Science.gov (United States)

    Bugbee, Bruce

    2011-01-01

    USU-Perigee is a dwarf red spring wheat that is a hybrid of a high-yield early tall wheat (USU-Apogee) and a low-yield, extremely short wheat that has poor agronomic characteristics. USU-Perigee was selected for its extremely short height (.0.3 m) and high yield . characteristics that make it suitable for growth in confined spaces in controlled environments. Other desirable characteristics include rapid development and resistance to a leaf-tip necrosis, associated with calcium deficiency, that occurs in other wheat cultivars under rapid-growth conditions (particularly, continuous light). Heads emerge after only 21 days of growth in continuous light at a constant temperature of 25 C. In tests, USU-Perigee was found to outyield other full dwarf (defined as wheat cultivars: The yield advantage at a constant temperature of 23 C was found to be about 30 percent. Originally intended as a candidate food crop to be grown aboard spacecraft on long missions, this cultivar could also be grown in terrestrial growth chambers and could be useful for plant-physiology and -pathology studies.

  8. Hyperspectral-imaging-based techniques applied to wheat kernels characterization

    Science.gov (United States)

    Serranti, Silvia; Cesare, Daniela; Bonifazi, Giuseppe

    2012-05-01

    Single kernels of durum wheat have been analyzed by hyperspectral imaging (HSI). Such an approach is based on the utilization of an integrated hardware and software architecture able to digitally capture and handle spectra as an image sequence, as they results along a pre-defined alignment on a surface sample properly energized. The study was addressed to investigate the possibility to apply HSI techniques for classification of different types of wheat kernels: vitreous, yellow berry and fusarium-damaged. Reflectance spectra of selected wheat kernels of the three typologies have been acquired by a laboratory device equipped with an HSI system working in near infrared field (1000-1700 nm). The hypercubes were analyzed applying principal component analysis (PCA) to reduce the high dimensionality of data and for selecting some effective wavelengths. Partial least squares discriminant analysis (PLS-DA) was applied for classification of the three wheat typologies. The study demonstrated that good classification results were obtained not only considering the entire investigated wavelength range, but also selecting only four optimal wavelengths (1104, 1384, 1454 and 1650 nm) out of 121. The developed procedures based on HSI can be utilized for quality control purposes or for the definition of innovative sorting logics of wheat.

  9. Leaf Rust of Wheat: Pathogen Biology, Variation and Host Resistance

    Directory of Open Access Journals (Sweden)

    James Kolmer

    2013-01-01

    Full Text Available Rusts are important pathogens of angiosperms and gymnosperms including cereal crops and forest trees. With respect to cereals, rust fungi are among the most important pathogens. Cereal rusts are heteroecious and macrocyclic requiring two taxonomically unrelated hosts to complete a five spore stage life cycle. Cereal rust fungi are highly variable for virulence and molecular polymorphism. Leaf rust, caused by Puccinia triticina is the most common rust of wheat on a worldwide basis. Many different races of P. triticina that vary for virulence to leaf rust resistance genes in wheat differential lines are found annually in the US. Molecular markers have been used to characterize rust populations in the US and worldwide. Highly virulent races of P. triticina are selected by leaf rust resistance genes in the soft red winter wheat, hard red winter wheat and hard red spring wheat cultivars that are grown in different regions of the US. Cultivars that only have race-specific leaf rust resistance genes that are effective in seedling plants lose their effective resistance and become susceptible within a few years of release. Cultivars with combinations of race non-specific resistance genes have remained resistant over a period of years even though races of the leaf rust population have changed constantly.

  10. Increasing wheat production while decreasing nitrogen losses from ammonium bicarbonate

    International Nuclear Information System (INIS)

    The objectives of a 4-year field experiment were i) to investigate the effects of rate and timing of application of ammonium bicarbonate on N-uptake efficiency by irrigated winter wheat, ii) to determine the fate of fertilizer N in wheat followed by maize, and iii) to study nitrate dynamics in the soil after N-fertilizer application to evaluate groundwater pollution by leaching. Nitrogen-application rates significantly affected wheat grain yields and straw dry matter. Grain yields were higher with 150 than with 225 kg N ha-1, whereas the highest fractional recoveries of N from ammonium bicarbonate occurred with 75 kg N ha-1 (38.5% in 1994-95 and 33.5% in 1996-97). On the basis of grain yield, N recovery and soil-N balance, ammonium bicarbonate at 150 kg N ha-1, was the optimum rate, when applied basally and as a top dressing to wheat. Subsequent yields of maize stover and grain were affected by N applied to the wheat, suggesting that fertilizer recommendations, in terms of rate and timing, should be made on the basis of effects on the cropping rotation as a whole. Water-holding capacity of the soil was poor, therefore large applications of N are likely to cause nitrate pollution of ground water. (author)

  11. Gamma radiation influence on technological characteristics of wheat flour

    Science.gov (United States)

    Teixeira, Christian A. H. M.; Inamura, Patricia Y.; Uehara, Vanessa B.; Mastro, Nelida L. d.

    2012-08-01

    This study aimed at determining the influence of gamma radiation on technological characteristics of wheat (Triticum sativum) flour and physical properties of pan breads made with this flour. The bread formulation included wheat flour, water, milk, salt, sugar, yeast and butter. The α-amylase activity of wheat flour irradiated with 1, 3 and 9 kGy in a Gammacell 220 (AECL), one day, five days and one month after irradiation was evaluated. Deformation force, height and weight of breads prepared with the irradiated flour were also determined. The enzymatic activity increased—reduction of falling number time—as radiation dose increased, their values being 397 s (0 kGy), 388 s (1 kGy), 343 s (3 kGy) and 293 s (9 kGy) respectively, remaining almost constant over the period of one month. Pan breads prepared with irradiated wheat flour showed increased weight. Texture analysis showed that bread made of irradiated flour presented an increase in maximum deformation force. The results indicate that wheat flour ionizing radiation processing may confer increased enzymatic activity on bread making and depending on the irradiation dose, an increase in weight, height and deformation force parameters of pan breads made of it.

  12. Anthocyanins in Wheat Seed – A Mini Review

    Directory of Open Access Journals (Sweden)

    Havrlentová Michaela

    2014-06-01

    Full Text Available Improving the micronutrients in food has become an important field of the Second Green Revolution. In recent years, minor bioactive compounds such as polyphenols, pigments and carotenoids, have attracted more and more interest from both researchers and food manufactures as health-promoting and disease-preventing effects in both in vitro and in vivo studies. One of plant pigments, wheat anthocyanins as plant phenolics are increasingly attractive as natural compounds positively affecting consumer´s health and condition moreover wheat is staple food source consumed usually daily. For a purple, blue, or red colour of wheat seed are responsible glycosylated cyanidins, delphinidins, malvinidins, pelargonidins, petunidins, and peonidins located in aleurone layer or pericarp, respectively. Other than white seed colour is not natural for common hexaploid wheat but this trait can be introduced from donors by aimed breeding programs. The way of wheat anthocyanins to provide positive effects for consumer´s physiology is limited due to their specific occurrence in seed parts usually removed during grain milling practice and lower stability during processing to foods

  13. Irradiation genetics - possibilities and achievments in wheat

    International Nuclear Information System (INIS)

    Variation in mutability was found in common wheat cultivars when inducing mutations. Mutants were obtained, distinguished from the initial cultivars by a number of features valuable for breeding: lower stem, higher earliness, greater cold and winter hardiness, more productive ears, higher resistance to diseases, etc. Irradiation of seed of F intervarietal hybrids was more effective than that of F1 as regards diversity and mutability of the hybrid population and still more effective in comparison with irradiation of seed from the initial parental cultivars. The possibilities are pointed out of enhancing individual gene mutability and recombinations and translocations by means of irradiation of hybrid seed. Thus, the possibilities are increased of obtaining a wider gamut of mutants attaining even characters distinguishing them from the initial species. Faster consolidation of new forms was observed in induced mutations in the hybrids than in their parental cultivars. Valuable mutant lines and culvars were obtained having higher ear and plant productivity. It is recommended to use induction of mutants in multiple intervarietal hybrids in F2. (author)

  14. Study on Somaclonal Variation of Spring Wheat

    Institute of Scientific and Technical Information of China (English)

    JIANG Shu-mei; HU Shang-lian; LI Wen-xiong

    2004-01-01

    Somaclonal variation of calli and regenerated plants of spring wheat ware detected by using technique RAPD in the study. Calli at different culture stages and regenerated plants derived from young spikes and immature embryos were used as materials. Molecular variation could be reflected from electrophoresis patternof RAPD fragments at different culture stage in calli, and in regenerated plants derived from different explants, even no phenotype variations were found. Somaclonal variation in calli and in regenerated plants appeared regularly: A higher frequency of variation in hybrids F2 was detected than that of the cultivar that is stable genetically. High variation frequency of RAPD fragments appeared in calli when cultured 75 days. The identical variations of RAPD fragments were observed in calli and in the regenerated plants induced from different genotype or explants. The variation frequency detected is higher in regenerated plants than that of in calli. RAPD could be applied easily and simply to determine variation in level of DNA at each stage cultured in vitro.

  15. Chemical Behavior of Cadmium in Wheat Rhizosphere

    Institute of Scientific and Technical Information of China (English)

    CHENNENG-CHANG; CHENHUAI-MAN

    1992-01-01

    The present study deals with some chemical behavior,including Cd extractability,species transformation and adsorption-desorption characteristics,of Cd in the rhizosphere(R) of wheat seedlings grown on both yellow-brown earth(YBE) and red earth (RE).Results indicated an increase of pH about 0.5 unit in the R of the yellow-brown earth and a decrease about 0.4 unit in the R of red earth in comparison with their respective bulk soils(NR).More Cd adsorbed and less Cd desorbed,and hence less Cd extracted in the R of YBE than those in the NR were found.The opposite cases were got for the R of RE.Fractionation experiment showed that in the R of YBE,more Cd was bound to Mn oxides and organic matter,less Cd was in exchangeable form,and little Cd was bound to amorphous and crystal iron oxides.However,little difference of the Cd species between the R and NR of RE was found. Regression analysis indicated that pH was one of the dominant factors affecting the chemical behavior of Cd in rhizosphere.

  16. Fusariotoxins in Wheat Grain in Serbia

    Directory of Open Access Journals (Sweden)

    Ana Stepanić

    2011-01-01

    Full Text Available Samples of wheat grain (41, collected during the 2010 harvest from seven localities inSerbia, were analysed for the presence of zearalenone (ZEA, T-2 toxin, deoxynivalenol (DONand fumonisine B1 (FB1. Results of Enzyme-Linked Immunosorbent Assay (ELISA showedthat all analysed samples were positive for the presence of at least one of four observedfusariotoxins. The most distributed mycotoxins were ZEA (90.2%, with the average concentrationof 442.6μg kg–1 and T-2 (90.2%, with the average concentration of 24.2 μg kg–1.DON (73.2% and FB1 (84.4% were detected in a somewhat smaller number of samples, buttheir average concentrations were higher (1988.1 μg DON kg–1 and 882.7 μg FB1 kg–1. Theestablished correlations between concentrations of DON and FB1 (r = 0.32 or DON and ZEA(r = 0.22 were not statistically significant. A negative correlation was established betweenconcentrations of T-2 and FB1 (r= -0.24, as well as, between T-2 and DON (r = -0.36. Detectedconcentrations of ZEA and T-2 were bellow the level prescribed by the World Health Organisation(WHO, while concentrations of FB1 and DON detected in five that is, 17 samples,respectively, were above the permissible limit for human consumption

  17. Wheat breadmaking properties in dependance on wheat enzymes status and climate conditions.

    Science.gov (United States)

    Tomić, Jelena; Torbica, Aleksandra; Popović, Ljiljana; Hristov, Nikola; Nikolovski, Branislava

    2016-05-15

    The objective of this study was to evaluate albumins profile, proteolytic and amylolytic activity level and baking performance of wheat varieties grown in two production years with different climate conditions (2011 and 2012) in four locations. The results of ANOVA showed that variety, location, production year, and their interactions all had significant effects on all tested wheat quality parameters. The enzymatic activity and specific bread volume were mainly influenced by the variety. The samples from 2012 production year, had the lower values of albumin content, proteolytic and amylolytic activity, and bread specific volume. The correlation analysis, performed for 2011 production year, showed that albumin fraction (15-30 kDa) and proteolytic activity were negatively correlated with bread specific volume indicating the role of this fraction on lowering the crucial bread quality parameter. In 2012 production year, albumin fractions (5-15 kDa; 50-65 kDa) showed the most correlations, especially with parameters of bread quality. PMID:26776009

  18. Study on physiological characteristics of winter wheat in drought land

    International Nuclear Information System (INIS)

    Physiological characteristics of winter wheat cultivated in drought land was studied. The results showed that with precipitation of 1 m in the growing period of wheat, it was feasible to use drought cultivation techniques, i.e., increasing the application of P, K and Zn, maintaining the present application of N and increasing the density of wheat plants, to increase the ability of photosynthesis in the parts from the top inter-node above, and a 4900 kg/hm2 or more of grain yield was obtained. 14C-assimilate transportation from different parts to grain in drought and irrigating cultivation conditions were 83. 73% and 75.31% respectively. The proline content in flag leaf and the chlorophyll content in the parts from the top inter-node above with drought cultivation were significantly higher than those with normal cultivation

  19. Improving the precision of genotype selection in wheat performance trials

    Directory of Open Access Journals (Sweden)

    Giovani Benin

    2013-12-01

    Full Text Available The aim of this study was to verify whether using the Papadakis method improves model assumptions and experimental accuracy in field trials used to determine grain yield for wheat lineages indifferent Value for Cultivation and Use (VCU regions. Grain yield data from 572 field trials at 31 locations in the VCU Regions 1, 2, 3 and 4 in 2007-2011 were used. Each trial was run with and without the use of the Papadakis method. The Papadakis method improved the indices of experimental precision measures and reduced the number of experimental repetitions required to predict grain yield performance among the wheat genotypes. There were differences among the wheat adaptation regions in terms of the efficiency of the Papadakis method, the adjustment coefficient of the genotype averages and the increases in the selective accuracy of grain yield.

  20. Multi-Wheat-Model Ensemble Responses to Interannual Climate Variability

    Science.gov (United States)

    Ruane, Alex C.; Hudson, Nicholas I.; Asseng, Senthold; Camarrano, Davide; Ewert, Frank; Martre, Pierre; Boote, Kenneth J.; Thorburn, Peter J.; Aggarwal, Pramod K.; Angulo, Carlos

    2016-01-01

    We compare 27 wheat models' yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981e2010 grain yield, and we evaluate results against the interannual variability of growing season temperature, precipitation, and solar radiation. The amount of information used for calibration has only a minor effect on most models' climate response, and even small multi-model ensembles prove beneficial. Wheat model clusters reveal common characteristics of yield response to climate; however models rarely share the same cluster at all four sites indicating substantial independence. Only a weak relationship (R2 0.24) was found between the models' sensitivities to interannual temperature variability and their response to long-termwarming, suggesting that additional processes differentiate climate change impacts from observed climate variability analogs and motivating continuing analysis and model development efforts.

  1. Multi-wheat-model ensemble responses to interannual climatic variability

    DEFF Research Database (Denmark)

    Ruane, A C; Hudson, N I; Asseng, S;

    2016-01-01

    We compare 27 wheat models' yield responses to interannual climate variability, analyzed at locations in Argentina, Australia, India, and The Netherlands as part of the Agricultural Model Intercomparison and Improvement Project (AgMIP) Wheat Pilot. Each model simulated 1981–2010 grain yield, and we...... evaluate results against the interannual variability of growing season temperature, precipitation, and solar radiation. The amount of information used for calibration has only a minor effect on most models' climate response, and even small multi-model ensembles prove beneficial. Wheat model clusters reveal...... common characteristics of yield response to climate; however models rarely share the same cluster at all four sites indicating substantial independence. Only a weak relationship (R2 ≤ 0.24) was found between the models' sensitivities to interannual temperature variability and their response to long...

  2. Do financial investors affect the price of wheat?

    Directory of Open Access Journals (Sweden)

    Daniele Girardi

    2012-03-01

    Full Text Available It is widely debated whether financial speculation was a significant force behind recent food price fluctuations. As a matter of fact, during the 2000s agricultural commodity derivatives markets were flooded by a ‘wall of money’ coming from financial investors. In agricultural exchanges, the greatest part of this huge financial inflow came from index traders, i.e. financial actors that follow a passive strategy of tracking a commodity index. In this article I present new empirical evidence that supports the hypothesis that financial investments have affected wheat price dynamics in recent years. In particular, I focus on Hard Red Winter (HRW wheat. Since 2007 HRW wheat price fluctuations have been positively related to US stock market returns and oil price movements. These correlations appear to be determined by commodity index traders, since both these relationships proved to be spurious, with the most tracked commodity index as the confounding variable.

  3. Intercropping of wheat and pea as influenced by nitrogen fertilization

    DEFF Research Database (Denmark)

    Ghaley, B.B.; Hauggaard-Nielsen, Henrik; Jensen, Henning Høgh;

    2005-01-01

    production decreased from a maximum of 1.34 to as low as 0.85 with increased fertilizer N supply. The study suggests that pea–wheat intercropping is a cropping strategy that use N sources efficiently due to its spatial self-regulating dynamics where pea improve its interspecific competitive ability in areas......The effect of sole and intercropping of field pea (Pisum sativum L.) and spring wheat (Triticum aestivum L.) on crop yield, fertilizer and soil nitrogen (N) use was tested on a sandy loam soil at three levels of urea fertilizer N (0, 4 and 8 g N m−2) applied at sowing. The 15N enrichment...... and natural abundance techniques were used to determine N accumulation in the crops from the soil, fertilizer and symbiotic N2 fixation. Intercrops of pea and wheat showed maximum productivity without the supply of N fertilizer. Intercropping increased total dry matter (DM) and N yield, grain DM and N yield...

  4. Construction and Characterization of Three Wheat Bacterial Artificial Chromosome Libraries

    Directory of Open Access Journals (Sweden)

    Wenjin Cao

    2014-11-01

    Full Text Available We have constructed three bacterial artificial chromosome (BAC libraries of wheat cultivar Triticum aestivum Wangshuibai, germplasms T. monococcum TA2026 and TA2033. A total of 1,233,792,170,880 and 263,040 clones were picked and arrayed in 384-well plates. On the basis of genome sizes of 16.8 Gb for hexaploid wheat and 5.6 Gb for diploid wheat, the three libraries represented 9.05-, 2.60-, and 3.71-fold coverage of the haploid genomes, respectively. An improved descending pooling system for BAC libraries screening was established. This improved strategy can save 80% of the time and 68% of polymerase chain reaction (PCR with the same successful rate as the universal 6D pooling strategy.

  5. Mycological and mycotoxicological quality of wheat and flour fractions

    Directory of Open Access Journals (Sweden)

    Stojanović Tatjana V.

    2005-01-01

    Full Text Available The seed infection is a result of complex factors influence: weather conditions, health conditions of used seed, quantity of infective potentila in soil, etc. By visual evaluation, initial wheat sample has been divided in four fractions: healthy, dark germed, slightly and very fusarious. Three varietes from two localities 1 and 2 have been included in analyses. Beside the wheat, the mycotoxicological contamination of flour produced by grounding of given samples was monitored, too. The representatives of genera Fusarium were dominating, and the most frequent was F. oxysporum. The wheat and flour samples have also been analysed on presence of aflatoxin B1 "AB1" and G1 "AG1", ochratoxin A "OA" and zearalenone "F-2" toxin. AG1 had the lowest representation (2,3 g/kg and the highest representation was of F-2 toxin (even 500 g/kg.

  6. Models of pressure compaction and their application for wheat meal

    Science.gov (United States)

    Skonecki, Stanisław; Kulig, Ryszard; Łysiak, Grzegorz

    2014-03-01

    Processes of compaction of granular materials were described using selected models. The analysis of their accuracy on the example of wheat was the basis for the discussion on their applicability to the processing of plant-origin materials. Parameters of the model equations for wheat, compressed at 10-18% moisture content were calculated, and the relations between these parameters and wheat moisture were determined. It was found that the analyzed models described the pressure compaction of granular plant material with different accuracy, and were highly dependent on moisture. The study also indicated that the model of Ferrero et al. fits the experimental results well. The parameters of this model reflected very well the physical phenomena which occur during compression.

  7. Reprint of: Pelletizing properties of torrefied wheat straw

    DEFF Research Database (Denmark)

    Stelte, Wolfgang; Nielsen, Niels Peter K.; Hansen, Hans Ove;

    2013-01-01

    Combined torrefaction and pelletization are used to increase the fuel value of biomass by increasing its energy density and improving its handling and combustion properties. However, pelletization of torrefied biomass can be challenging and in this study the torrefaction and pelletizing properties...... of wheat straw have been analyzed. Laboratory equipment has been used to investigate the pelletizing properties of wheat straw torrefied at temperatures between 150 and 300 °C. IR spectroscopy and chemical analyses have shown that high torrefaction temperatures change the chemical properties of the wheat...... straw significantly, and the pelletizing analyses have shown that these changes correlate to changes in the pelletizing properties. Torrefaction increase the friction in the press channel and pellet strength and density decrease with an increase in torrefaction temperature....

  8. Study on the Factors Influencing the Efficiency of Wheat Transformation

    Institute of Scientific and Technical Information of China (English)

    YE Xing-guo; XU Hui-jun; DU Li-pu; XIN Zhi-yong

    2002-01-01

    Wheat transformation efficiency is closely related to several factors such as receptor genotype, constructed plasmid and selection procedure after bombardment or co-cultivation. In our study, several kinds of antibiotics, which were normally used in plant transformation to the selection genes of nptⅡ, bar and hpt,were tested for the optimal concentrations for wheat transformation. The results showed that 25 - 50mg/L of geneticin (G418) was suitable for the selection of nptⅡ, kanamycin or neomycin was not suitable for use. 3 5mg/L of phosphinothricin (PPT) or biolaphos could be used for the selection of bar, 100 - 150mg/L of hygromycin for the selection of hpt. Yangmai 158 and Yangmai 10 with high tissue culture response and good agronomic characteristics were screened from 25 potential Chinese wheat cultivars. The concentration changing of selectable agent in selection medium was helpful to obtain enough regeneration plantlets with strong root system.

  9. Promising wheat forms obtained by hybrid seed irradiation

    International Nuclear Information System (INIS)

    Air dry F2 hybrid seeds of five crosses habe been γ-irradiated by 5 and 10 krad doses of 60Co. The types of hybrid and induced variation and the new wheat forms obtained are studied. The combination of the sex hybridization and induced mutagenesis prove to be a promising method for widening the scope of recombination processes and mutational variation, which in some cases even surpass the range observed in parent cultivar and species variation. The wheat forms obtained can be used in wheat breeding directly or as germplasm for valuable biological and economic properties and characters such as earliness, short, logging resistant stem, upright leaves, productive spike, rust and powdery mildew resistance, etc. (author)

  10. Incidence of Mythimna sequax parasitized in wheat crop

    Directory of Open Access Journals (Sweden)

    Orcial Ceolin Bortolotto

    2015-12-01

    Full Text Available ABSTRACT: This study investigated the natural parasitism of Mythimna sequax Franclemont, 1951, in wheat during the crop season of 2008. In total, 237 larvae were captured, of which 10.12% were parasitized. The Tachinidae species Winthemia trinitatis (Thompson, 1963, Winthemia tricolor (Wulp, 1890, Lespesia aletiae (Riley, 1879, and Lespesia archippivora Beneway, 1963 are reported for the first time parasitizing the wheat armyworm in Brazil. In addition, two other genus of parasitoids were identified, one Tachinidae Peleteria Robineau-Desvoidy, 1830 and one Ichneumonidae Ophion (Fabricius, 1798. This study reported for the first time four Tachinidae species parasitizing W. sequax, and further studies are needed to promote the conservation of these parasitoids in agroecossystem and development biological control programs for management of the wheat armyworm.

  11. Summer fallow soil management - impact on rainfed winter wheat

    DEFF Research Database (Denmark)

    Li, Fucui; Wang, Zhaohui; Dai, Jian;

    2014-01-01

    Summer fallow soil management is an important approach to improve soil and crop management in dryland areas. In the Loess Plateau regions, the annual precipitation is low and varies annually and seasonally, with more than 60% concentrated in the summer months from July to September, which...... is the summer fallow period in the winter wheat-summer fallow cropping system. With bare fallow in summer as a control, a 3-year location-fixed field experiment was conducted in the Loess Plateau to investigate the effects of wheat straw retention (SR), green manure (GM) planting, and their combination on soil...... water retention (WR) during summer fallow, winter wheat yield, and crop water use and nitrogen (N) uptake. The results showed that SR increased soil WR during summer fallow by 20 mm on average compared with the control over 3 experimental years but reduced the grain yield by 8% in the third year...

  12. Effect of Protein Molecular Weight Distribution on Kernel and Baking Characteristics and Intra-varietal Variation in Hard Spring Wheats

    Science.gov (United States)

    Specific wheat protein fractions are known to have distinct associations with wheat quality traits. Research was conducted on 10 hard spring wheat cultivars grown at two North Dakota locations to identify protein fractions that affected wheat kernel characteristics and breadmaking quality. SDS ext...

  13. Cultivation-based and molecular assessment of bacterial diversity in the rhizosheath of wheat under different crop rotations

    NARCIS (Netherlands)

    Tahir, Muhammad; Mirza, M.S.; Hameed, Sohail; Rocha Dimitrov, Mauricio; Smidt, Hauke

    2015-01-01

    A field study was conducted to compare the formationand bacterial communities of rhizosheaths of wheat grown under wheat-cotton and wheat-rice rotation and to study the effects of bacterial inoculation on plant growth. Inoculation of Azospirillum sp. WS-1 and Bacillus sp. T-34 to wheat plants inc

  14. Economic analysis of wheat production on family farms

    Directory of Open Access Journals (Sweden)

    Todorović Saša Z.

    2010-01-01

    Full Text Available Serbian agricultural producers are currently facing a large number of challenges which have a significant influence on their business activities. Continuous monitoring and evaluation of existing family farms business activities is the only way to improve their profitability and enhance competitiveness in such conditions. Bearing this in mind, the objective of this research is to emphasize an importance of the economic analysis of wheat production on family farms and to contribute successfully to the formulation of the answers to questions if and under which conditions the wheat production is profitable. In order to have a complete insight into investigated problem subject, investigations were carried out on selected family farms. Collected data were processed using calculation procedure for the purpose of determination of main economical indicators of the success of wheat production. Based on realized financial results it can be concluded that with the selling price of 10,000.00 diners per ton, only family farms which have achieved yield of over 7.5 t/ha with adequate level of investments are profitable. Since realized average yield of wheat on family farms in the Republic of Serbia in 2009 was 3.58 t/ha and level of investment necessary for realization of this yield, it is clear that the majority of family farms had loss in wheat production. The results of this study suggest that the economic status of the wheat production depends on the yield and achieved sales price, as well as on the amount of applied production factors and price level for their purchasing.

  15. Analysis on Relationship between Overcast and Rainy Weather, Drought, Flood and Wheat Yield

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    [Objective] The research aimed to study influence of meteorological factor in late growth stage of wheat. [Method] Based on precipitation, sunshine and yield per unit of wheat in Anyang City in May of 1979-2008, the positive and negative influences of meteorological condition in late growth stage of wheat (May) on wheat yield in Anyang City were analyzed by using agricultural climatic statistical method. Moreover, the reason and defense measure of green-dry hazard in late growth stage of wheat in the city w...

  16. Overexpression of TiERF1 enhances resistance to sharp eyespot in transgenic wheat

    OpenAIRE

    Chen, Liang; Zhang, Zengyan; Liang, Hongxia; Liu, Hongxia; Du, Lipu; Xu, Huijun; Xin, ZhiYong

    2008-01-01

    Wheat sharp eyespot, primarily caused by a soil-borne fungus Rhizoctonia cerealis, has become one of the most serious diseases of wheat in China. In this study, an ethylene response factor (ERF) gene from a wheat relative Thinopyrum intermedium, TiERF1, was characterized further, transgenic wheat lines expressing TiERF1 were developed, and the resistance of the transgenic wheat lines against R. cerealis was investigated. Southern blotting analysis indicated that at least two copies of the TiE...

  17. CONTRIBUTIONS TO THE KNOWLEDGE OF THE SPECIES OF BEETLES (INSECTA: COLEOPTERA FROM WHEAT CROP

    Directory of Open Access Journals (Sweden)

    Mihai Tălmaciu

    2016-07-01

    Full Text Available This paper presents the species of beetles (Insecta: Coleoptera between in wheat crops from Tişiţa, in Vrancea county. The observations were made in a crop of wheat in 2013, who were placed the soil traps type Barber, during the two months, May and June. It was used three variants: • Variant 1 - consumption wheat untreated • Variant 2 - consumption wheat treaty • Variant 3 - treated wheat seed The gathering of samples from the traps was done periodically, every 12-15 days. The most species frequent gathered was: Pentodon idiota, Epicometis hirta, Opatrum sabulosum, Phyllotreta atra, Phyllotreta nemorum, Tanymecus dilaticollis.

  18. Efficient initiation of in vitro culture at wheat

    OpenAIRE

    Cristian Felix BLIDAR; Aurel ARDELEAN; Violeta TURCUS

    2011-01-01

    Wheat is one of the most important crop plant species used for food and feed as well as in the bioethanol industry and therefore it was in the center of biotechnological research and it is still present. The main aim of this article is to investigate the efficiency of the Blidar type filter-paper bridges in initiating the wheat in vitro cultures for liquid culture media, in comparison with the conventional agarized culture media – solid culture media. In these experiments it were used modifie...

  19. Implications of energy efficiency measures in wheat production

    DEFF Research Database (Denmark)

    Meyer-Aurich, Andreas; Ziegler, T.; Scholz, L.;

    The economic and environmental effect of energy saving measures were analyzed for a typical wheat production system in Germany. The introduction of precision farming, reduced nitrogen fertilization and improved crop drying technologies proved to be efficient measures for enhancing energy efficiency...... in wheat production. While the measures precision farming and improved crop drying require investments, reduced fertilizer input can be realized without investments. The environmental effects of all measures are comparable and do not show a clear advantage of one measure against the others. However......, reduced fertilizer input implies an economic loss which is unlikely to be realized by farmers unless they are forced to do so....

  20. Extraction of Oil from Wheat Germ by Supercritical CO2

    OpenAIRE

    Bruno Marongiu; Dessì, Maria A.; Silvia Porcedda; Danilo Falconieri; Alessandra Piras; Antonella Rosa

    2009-01-01

    This study examined the supercritical fluid extraction of wheat germ oil. The effects of pressure (200-300 bar at 40 °C) and extraction time on the oil quality/quantity were studied. A comparison was also made between the relative qualities of material obtained by SFE and by organic solvent extraction. The extracts were analyzed for α-tocopherol and polyunsaturated fatty acid content. The maximum wheat germ oil yield at about 9% was obtained with supercritical carbon dioxide extraction at 300...

  1. Sequencing and analyses of the hexaploid wheat chromosome 3B

    OpenAIRE

    Choulet, Frédéric; Wincker, P.; Quesneville, Hadi; Brunel, Dominique; Gill, B.; Appels, R.; Keller, Beat; Feuillet, Catherine

    2010-01-01

    Because of its large (17 Gb, 5x the human genome and 40x the one of rice), polyploid (3 homoeologous A-, B- and D-genomes within a same nucleus) and highly repetitive (>80% of DNA corresponding to transposable elements) genome, the development of wheat genomics has been lagging behind the one of the other major crops. Two years after the establishment of the first physical map of the biggest wheat chromosome, the 3B, which represents 1 Gb (Paux et al. Science 2008), its complete sequencing is...

  2. Chlorophyll a fluorescence to phenotype wheat genotypes for heat tolerance

    DEFF Research Database (Denmark)

    Sharma, Dew Kumari; Andersen, Sven Bode; Ottosen, Carl-Otto;

    . Chlorophyll a fluorescence has been a versatile tool in photosynthesis research to measure plant responses to various abiotic stresses that affect PSII. We aim to establish a reproducible protocol to measure response of wheat genotypes to high temperature, based on the physiological marker, maximum quantum......%. Our protocol seems to be stable over environments since interaction between genotypes and the three repeated experiments separated in time was not statistically significant. The chlorophyll a fluorescence protocol may enable identification of wheat lines reliably more or less tolerant to heat stress...

  3. Physiological response of wheat, maize and cotton to gamma irradiation

    International Nuclear Information System (INIS)

    Grains of wheat triticum aestivum vulgare cv. Giza 155, maize Zea mays cv. double hybrid strain 17 S and cotton seeds Gossypium barbadence cv. Giza 67 were irradiated with successive doses of gamma rays from 0 to 64 Krad. Irradiating wheat grains with 1 Krad, maize grains with 0.5 Krad and cotton seeds with 4 Krad stimulated their germination and enhanced the growth of seedlings and their chlorophyll content. Also, these doses activated Alpha- and Beta-Amylase in the seeds. Higher doses had suppression effects. Peroxidase value in the seedlings of the three species was accelerated progressively in concomitant with the increase in the dosage

  4. Ancient hybridizations among the ancestral genomes of bread wheat

    OpenAIRE

    Marcussen, T.; Sandve, S. R.; Heier, L.; Spannagl, M.; Pfeifer, M.; Rogers, J; Doležel, J. (Jaroslav); Pozniak, C.; Eversole, K.; Feuillet, C; Gill, B; Friebe, B; Lukaszewski, A. J.; Sourdille, P.; Endo, T. R.

    2014-01-01

    The allohexaploid bread wheat genome consists of three closely related subgenomes (A, B, and D), but a clear understanding of their phylogenetic history has been lacking. We used genome assemblies of bread wheat and five diploid relatives to analyze genome-wide samples of gene trees, as well as to estimate evolutionary relatedness and divergence times. We show that the A and B genomes diverged from a common ancestor similar to 7 million years ago and that these genomes gave rise to the D geno...

  5. Effect of the radioactive emanation on the wheat variability

    International Nuclear Information System (INIS)

    A survey is made on the experimental mutagenesis in wheat and the results obtained are presented of mutants of several varieties and of intervarietal wheat hybrids obtained from gamma-ray treated seed. Some of the mutant forms produced had valuable changes for the breeding such as a stem lower than that of the initial varieties, broader leaves, erect leaves, etc. as well as earlier forms, forms with double or bouquet-like situated spikelets thus increasing the early productivity as well as forms blooming with open glumes. (author)

  6. Towards sequencing the 1 Gb wheat chromosome 3B

    OpenAIRE

    Choulet, Frédéric; Paux, Etienne; Leroy, Philippe; Sourdille, Pierre; Schlub, Stéphane; Brunel, Dominique; Barbe, Valérie; Wincker, Patrick; Feuillet, Catherine

    2009-01-01

    * BACKGROUND: Wheat is the most widely grown crop worldwide but so far, the access to its genome sequence has been hampered by its size (17 Gb) and highly repetitive structure. We plan to sequence and annotate the largest bread wheat chromosome, 3B (1 Gb i.e. 2.5x the rice genome) using a hybrid approach combining Roche454 Titanium sequencing of BACs and Whole Chromosome Shotgun (WCS) with Illumina/Solexa GAII PE reads. In a pilot project, we sequenced and annotated 13 large contigs (18 Mb) ...

  7. Commercial enzyme influence on broilers fed different levels of wheat

    OpenAIRE

    Seifi S.

    2013-01-01

    An experiment was conducted to evaluate the efficacy of multienzyme supplement (Natuzyme®) in diets containing wheat on the broilers performance. A total of one hundred twenty day old male broiler chicks (Arbor Acres) were randomly assigned to 6 treatments with a 2 3 factorial arrangement (0, 150 and 300 gram per kilogram wheat and 0 and 0.025 gram per kilogram enzyme). Chickens were fed with starter, grower and finisher diets during 1-21, 22- 35, 36-49 day...

  8. In vitro binding of puroindolines to wheat starch granules

    DEFF Research Database (Denmark)

    Sørensen, Helle Aagaard; Darlington, H.F.; Shewry, P.R.

    2001-01-01

    Puroindoline (pin) preparations made from flours of hard and soft wheats contained a mixture of pin-a, 0.19/0.53 alpha -amylase inhibitor, and purothionins. Starch granule preparations from the same cultivars were treated with proteinase to remove surface proteins and incubated with solutions of ......, total albumins, a commercial preparation of wheat alpha -amylase inhibitors, and barley beta -amylase) were incubated with the starch granules under the same conditions, indicating that in vitro binding can be used to study specific starch granule and protein interactions....

  9. Evaluation of the surface renewal method to estimate wheat evapotranspiration

    OpenAIRE

    Zapata Ruiz, Nery; Martínez-Cob, Antonio

    2002-01-01

    The performance of the surface renewal method to estimate latent heat fluxes (LE) over a wheat crop was evaluated by comparison against values of LE measured independently using a weighing lysimeter. High-frequency temperature readings were taken at 1.5 m above ground from 29 April to 7 June 2000 over a 0.7–0.8 m high wheat crop. Surface renewal analysis was applied for two time lags r (0.75 and 0.25 s) to estimate half-hour sensible heat flux (H) and, subsequently, LE by solving the energy b...

  10. Immunofluorescent determination of wheat protein in meat products

    Directory of Open Access Journals (Sweden)

    Michaela Petrášová

    2014-02-01

    Full Text Available In food industry nowadays, there are various plant-origin protein additives which are meant for production of meat products. Among the most frequent additives of this type there are different kinds of flour, starch, fiber, and plant-origin proteins. Their usage at present is limited by the existing legislation not to prevent consumer deception but also for reasons of possible influence on consumer health. Therefore, this problem is paid a lot of attention not only in the Czech Republic but also all over the world. The main risk is seen in the impossibility to choose a suitable foodstuff for an individual prone to allergic reactions. Potential allergens are also often plant-origin raw materials which are added into foodstuffs for their technological qualities and low price. Wheat is widely cultivated cereal as well as an important source of proteins. After ingestion or inhalation, wheat proteins may cause adverse reactions. These adverse effects include a wide range of disorders which are dependent on the method of contact with wheat protein. These adverse effects can then take the form of various clinical manifestations, such as celiac disease, T-cell mediated inflammatory bowel disease, dermatitis, skin rash, breathing difficulties, allergy to pollen or to wheat flour or food allergy to foodstuffs containing gluten. The only possible protection against adverse immune reactions for those with food allergies is strictly excluding the allergen from their diet. Although the number of studies dealing with the reduction or loss of allergenicity is increasing, yet these practices are not common. Most of the population suffering from food allergies is thus still dependent on strict exclusion of foodstuffs causing adverse allergic reactions from their diet. In order to avoid misleading consumers and also to protect allergic consumers, analytical methods applicable to all types of foodstuffs have been developed. Unfortunately, detection of allergens in

  11. Quantitative analysis of phytate globoids isolated from wheat bran and characterization of their sequential dephosphorylation by wheat phytase

    DEFF Research Database (Denmark)

    Bohn, Lisbeth; Josefsen, Lone; Meyer, Anne S.;

    2007-01-01

    Wheat phytase was purified to investigate the action of the enzyme toward its pure substrate (phytic acid - myo-inositol hexakisphosphate) and its naturally occurring substrate (phytate globoids). Phytate globoids were purified to homogeneity from wheat bran, and their nutritionally relevant...... parameters were quantified by ICP-MS. The main components of the globoids were phytic acid (40% w/w), protein (46% w/w), and several minerals, in particular, K > Mg > Ca > Fe (in concentration order). Investigation of enzyme kinetics revealed that Km and V-max decreased by 29 and 37%, respectively, when pure...... phytic acid was replaced with phytate globoids as substrate. Time course degradation of phytic acid or phytate globoids using purified wheat phytase was followed by HPIC identification of inositol phosphates appearing and disappearing as products. In both cases, enzymatic degradation initiated at both...

  12. Soluble fiber and resistant starch components in some Indian and Canadian wheat varieties and in a wheat-soy product - Chapati

    OpenAIRE

    Vadnerkar, Anuya Anant

    2004-01-01

    This study aimed to quantify resistant starch (RS) beta-glucans (BG) and fructo-oligosaccharides (FOS) in Indian and Canadian wheat varieties and in chapaties made from these; and to assess the effects of soy flour on the levels of these components and its effects on the sensory and functional properties of the wheat-soy chapaties. Seven wheat varieties (Indian / Canadian) were milled into flour; supplemented with 0 % (control), 10 %, 20 % or 30 % defatted soy flour and made into chapaties. F...

  13. Early vigour improves phosphate uptake in wheat.

    Science.gov (United States)

    Ryan, Peter R; Liao, Mingtan; Delhaize, Emmanuel; Rebetzke, Gregory J; Weligama, Chandrakumara; Spielmeyer, Wolfgang; James, Richard A

    2015-12-01

    Quantitative trait loci (QTLs) for shoot biomass were identified in wheat grown on a soil high in total phosphorus (P) but low in plant-available P. The two populations screened included recombinant inbred lines (RILs) from Chuan-Mai 18/Vigour 18 and doubled-haploid lines from Kukri/Janz. Glasshouse-grown plants were harvested at the five-leaf stage. Seven QTLs for shoot biomass were identified in the RILs, with the largest on chromosome 7A accounting for 7.4% of the phenotypic variance. RILs from the upper tail had larger embryos than RILs from the lower tail. Tail lines were then grown in non-limiting P and the results indicated that early vigour and the capacity to access P contributed to the initial distribution. The influence of early vigour on P nutrition was examined further with advanced vigour lines (AVLs). The AVLs accumulated more shoot biomass, maintained lower shoot P concentrations, and showed greater P-acquisition efficiency than Vigour 18. Nine QTLs for shoot biomass were identified in the Kukri/Janz population. Two on chromosomes 4B and 4D accounted for 24.8% of the variance. Candidates underlying these QTLs are the Rht genes. We confirmed the influence of these genes using near-isogenic lines with different Rht alleles. The dwarf and semi-dwarf alleles affected shoot and root biomass at high and low P but not the efficiency of P acquisition. We conclude that early vigour contributed to the distributions in both populations. Early vigour can increase plant growth at suboptimal P and some sources can also improve the efficiency of P acquisition.

  14. Dryland wheat domestication changed the development of aboveground architecture for a well-structured canopy.

    Directory of Open Access Journals (Sweden)

    Pu-Fang Li

    Full Text Available We examined three different-ploidy wheat species to elucidate the development of aboveground architecture and its domesticated mechanism under environment-controlled field conditions. Architecture parameters including leaf, stem, spike and canopy morphology were measured together with biomass allocation, leaf net photosynthetic rate and instantaneous water use efficiency (WUE(i. Canopy biomass density was decreased from diploid to tetraploid wheat, but increased to maximum in hexaploid wheat. Population yield in hexaploid wheat was higher than in diploid wheat, but the population fitness and individual competition ability was higher in diploid wheats. Plant architecture was modified from a compact type in diploid wheats to an incompact type in tetraploid wheats, and then to a more compact type of hexaploid wheats. Biomass accumulation, population yield, harvest index and the seed to leaf ratio increased from diploid to tetraploid and hexaploid, associated with heavier specific internode weight and greater canopy biomass density in hexaploid and tetraploid than in diploid wheat. Leaf photosynthetic rate and WUEi were decreased from diploid to tetraploid and increased from tetraploid to hexaploid due to more compact leaf type in hexaploid and diploid than in tetraploid. Grain yield formation and WUEi were closely associated with spatial stance of leaves and stems. We conclude that the ideotype of dryland wheats could be based on spatial reconstruction of leaf type and further exertion of leaf photosynthetic rate.

  15. Wheat Generation Adding in Xundian County of Yunnan Province in Summer

    Institute of Scientific and Technical Information of China (English)

    Kong Zhi-you; Liu Ye-ju; Qin Peng

    2014-01-01

    Local climate conditions and sowing time are very important to the vernalization and summer reproduction of the wheat. Xundian County is located in Yunnan Province of China, at latitude 25.56° north and longitude 103.25° east. Xundian County is situated 1 873 m above sea level, and is conducive for the summer reproduction of the wheat. To investigate the optimal sowing time, 11 spring wheat cultivars and one semi-winter wheat cultivar were sown 10 times at an interval of five days from May 26, 2012, and the strong winter wheat Suyin 10 was treated in a vernalization room at 2℃ with different concentrations of the gibberellin and 5-azacytidine. The results showed that Suyin 10 should be vernalized at 2℃ for 30 days in summer, and the growth periods of strong winter wheat plants could been shortened if treated with a specific concentration of the gibberellin and 5-azacytidine at a low temperature. The growth period of the spring wheat in summer reproduction was delayed, and their agronomic traits gradually decreased with the passage of the sowing time. Thus, spring wheat should be sown at the earliest time possible for better yield. June 25 should be the latest date for summer reproduction of the wheat, but the semi-winter wheat cultivars in Xundian County should be added generation in summer after being treated at 2℃ for 10 days. Xundian County is a suitable location for summer reproduction of the wheat in China.

  16. Mineral Composition of Organically Grown Wheat Genotypes: Contribution to Daily Minerals Intake

    Directory of Open Access Journals (Sweden)

    Eva Johansson

    2010-09-01

    Full Text Available In this study, 321 winter and spring wheat genotypes were analysed for twelve nutritionally important minerals (B, Cu, Fe, Se, Mg, Zn, Ca, Mn, Mo, P, S and K. Some of the genotypes used were from multiple locations and years, resulting in a total number of 493 samples. Investigated genotypes were divided into six genotype groups i.e., selections, old landraces, primitive wheat, spelt, old cultivars and cultivars. For some of the investigated minerals higher concentrations were observed in selections, primitive wheat, and old cultivars as compared to more modern wheat material, e.g., cultivars and spelt wheat. Location was found to have a significant effect on mineral concentration for all genotype groups, although for primitive wheat, genotype had a higher impact than location. Spring wheat was observed to have significantly higher values for B, Cu, Fe, Zn, Ca, S and K as compared to winter wheat. Higher levels of several minerals were observed in the present study, as compared to previous studies carried out in inorganic systems, indicating that organic conditions with suitable genotypes may enhance mineral concentration in wheat grain. This study also showed that a very high mineral concentration, close to daily requirements, can be produced by growing specific primitive wheat genotypes in an organic farming system. Thus, by selecting genotypes for further breeding, nutritional value of the wheat flour for human consumption can be improved.

  17. Efficient induction of Wheat-agropyron cristatum 6P translocation lines and GISH detection.

    Directory of Open Access Journals (Sweden)

    Liqiang Song

    Full Text Available The narrow genetic background restricts wheat yield and quality improvement. The wild relatives of wheat are the huge gene pools for wheat improvement and can broaden its genetic basis. Production of wheat-alien translocation lines can transfer alien genes to wheat. So it is important to develop an efficient method to induce wheat-alien chromosome translocation. Agropyroncristatum (P genome carries many potential genes beneficial to disease resistance, stress tolerance and high yield. Chromosome 6P possesses the desirable genes exhibiting good agronomic traits, such as high grain number per spike, powdery mildew resistance and stress tolerance. In this study, the wheat-A. cristatum disomic addition was used as bridge material to produce wheat-A. cristatum translocation lines induced by (60Co-γirradiation. The results of genomic in situ hybridization showed that 216 plants contained alien chromosome translocation among 571 self-pollinated progenies. The frequency of translocation was 37.83%, much higher than previous reports. Moreover, various alien translocation types were identified. The analysis of M2 showed that 62.5% of intergeneric translocation lines grew normally without losing the translocated chromosomes. The paper reported a high efficient technical method for inducing alien translocation between wheat and Agropyroncristatum. Additionally, these translocation lines will be valuable for not only basic research on genetic balance, interaction and expression of different chromosome segments of wheat and alien species, but also wheat breeding programs to utilize superior agronomic traits and good compensation effect from alien chromosomes.

  18. Primary studies on tissue culture from mature embryos in diploid and tetraploid wheat

    Institute of Scientific and Technical Information of China (English)

    Ruiming BI; Honggang WANG

    2008-01-01

    Using mature embryos (MEs) as the explants,the callus induction,embryogenic callus differentiation,plantlet regeneration and culture efficiency in diploid and tetraploid wheat of four genotypes were studied.The tested four genotypes wheat included cultivable emmer wheat ( Triticum dicoccum Schuble),durum wheat ( Triticum durum Desf.) and the common wheat progenitors Triticum dicoccoides and Triticum aegilopides.Results indicated that there were significant differences in the efficiency of callus induction,callus differentiation and plant regeneration among the tested genotypes.The efficiency of differentiation and regeneration shows strong genotype dependence.The rates of callus induction,embryogenic callus differentiation,plantlet regeneration and culture efficiency respectively were 95.00%,90.00%,32.40%,and 27.70% in cultivable emmer wheat,which were significantly higher than other tested genotypes.Therefore,this study has provided a basis for genetic transformation,gene cloning and molecular plant breeding in wheat and other related species.

  19. Some traits of low temperature germplasm wheat under extremely unfavorable weather conditions

    Institute of Scientific and Technical Information of China (English)

    张嵩午; 王长发; 冯佰利; 苗芳; 周春菊; 张荣萍

    2001-01-01

    Through a long-term observation on the canopy temperature and some traits of wheat the temperature germplasm of wheat was found to result in the wheats having either a high or a low plant temperature. Under normal weather conditions, the wheat having a low temperature germplasm (LTG) demonstrated several advantageous physiologi-cal and agronomic traits than those having a high temperature germplasm (HTG). Under the extremely unfavorableweather conditions, such as rainy weather or severe drought, LTG wheat still could maintain its superiority to HTG wheat in physiological and agronomic traits including leaf functional duration, chlorophyll content, malondialdehyde content, transpiration rate, net photosynthesis rate, root vitality and kernel plumpness. The wide adaptability of LTG wheat to awide range of meteoro-ecological conditions could provide a valuable germplasm in breeding of good strains with broad-spectrum stress resistance.

  20. A Knowledge Model- and Growth Model-Based Decision Support System for Wheat Management

    Institute of Scientific and Technical Information of China (English)

    ZHU Yan; CAO Wei-xing; WANG Qi-meng; TIAN Yong-chao; PAN Jie

    2003-01-01

    By applying the system analysis principle and mathematical modeling technique to knowledge expression system for crop cultural management, the fundamental relationships and quantitative algorithms of wheat growth and management indices to variety types, ecological environments and production levels were analysed and extracted, and a dynamic knowledge model with temporal and spatial characters for wheat management (WheatKnow) was developed. By adopting the soft component characteristics as non language rele vance, re-utilization and portable system maintenance, and by further integrating the wheat growth simulation model (WheatGrow) and intelligent system for wheat management, a comprehensive and digital knowledge model, growth model and component-based decision support system for wheat management (MBDSSWM) was established on the platforms of Visual C++ and Visual Basic. The MBDSSWM realized the effective integration and coupling of the prediction and decision-making functions for digital crop management.

  1. The contribution of distant hybridization with decaploid Agropyron elongatum to wheat improvement in China

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    Wheat is a staple food crop in the world as well as in China. Because of the progress of wheat breeding and other agricultural sci-technologies, the wheat grain yield per unit area has increased more than five folds from 1952 to 2006 in China. The first part of this article briefly reviews the history of wheat breeding in China. Second, the establishment of "Triticum aestivum-Agropyron" distant hybridization system and its contribution to wheat production and breeding in China are summarized. Finally, the future challenges of wheat breeding are discussed, which include how to increase the utilization efficiencies of water, soil nutrient and light energy through breeding.As an example, our research progress on how to increase light use efficiency in wheat through breeding is introduced and discussed.

  2. Comparison of the nucleotide sequences of wheat dwarf virus (WDV) isolates from Hungary and Ukraine.

    Science.gov (United States)

    Tóbiás, Istvan; Shevchenko, Oleksiy; Kiss, Balázs; Bysov, Andriy; Snihur, Halina; Polischuk, Valery; Salánki, Katalin; Palkovics, László

    2011-01-01

    Wheat dwarf virus (WDV) is the most ubiquitous virus in cereals causing huge losses in both Hungary and Ukraine. The presence of barley-and wheat-adapted strains has been confirmed, suggesting that the barley strain is restricted to barley, while the wheat strain is present in both wheat and barley plants. Five WDV isolates from wheat plants sampled in Hungary and Ukraine were sequenced and compared with known WDV isolates from GenBank. Four WDV isolates belonged to the wheat strain. Our results indicate that WDV-Odessa is an isolate of special interest since it has originated from wheat, but belongs to the barley-adapted strain, providing novel data on WDV biology and raising issues of pathogen epidemiology. PMID:21905629

  3. Sensory Profiles and Volatile Compounds of Wheat Species, Landraces and Modern Varieties

    DEFF Research Database (Denmark)

    Starr, Gerrard

    be replaced by, easier to produce, wheat porridge or cooked grain in future sensory analyses. Sixty four field- and 81 greenhouse cultivated wheat varieties were used. Wheat grain volatiles were extracted by Dynamic Headspace Extraction (DHE) and trapped volatiles were analysed by Gas Chromatography......-Mass Spectrometry (GC-MS). Sensory studies were conducted of cooked grain, wheat porridge and bread using a generic version of Quantitative Descriptive Analysis (QDA). Multivariate methods: Partial Least Squares (PLS), Partial Least Squares-Discrimination Analysis (PLS-DA) and Principal Component Analysis (PCA...... as cooked wheat grain, flour porridge and for eight of these varieties, baked bread. Descriptors for odours of cocoa, oat porridge and øllebrød1) and flavours of sweet, bitter, oat porridge and øllebrød1) were common to all three wheat products. Wheat porridge shared 6 odour and 10 flavour descriptors...

  4. The role of whole-wheat grain and wheat and rye ingredients on the digestionand fermentation processes in the gut - a model experiment with pigs

    DEFF Research Database (Denmark)

    Legall, Maud; Serena, Anja; Jørgensen, Henry;

    2009-01-01

    The effect of wheat and rye breads made from white wheat flour with added refined fibre (WFL), whole-wheat grain, wheat aleurone flour (WAF) or rye aleurone flour (RAF) on digestion and fermentation processes in the gut was studied in a model experiment with pigs. The diets were similar in dietary...... h and caecal and colonic contents at slaughter. The rigid nature of the aleurone cell walls encapsulated nutrients, which resulted in reduced (P,001) digestibility of protein (WAF and RAF breads) and fat (RAF bread). For the RAF bread, the digestibility of starch was also lower (P,0001) than...

  5. Formation of Grain Quality in Bread Wheat Varieties under Mil-Garabakh Region of Azerbaijan: Az Wheat

    Directory of Open Access Journals (Sweden)

    HASANOVA G. M

    2014-08-01

    Full Text Available Grain quality in bread wheat varieties was studied under Mil-Garabakh region of Azerbaijan. It was revealed that in these conditions the gluten content was relatively high, while the quality of gluten determined by DCO and sedimentation index was low. Apparently, this is due to the fact that in Tartar AIA ЗОС during grain ripening period temperature was high. Usually under these conditions, high bread baking quality of wheat grain was not formed. However, bread obtained from varieties Girmizi bugda, Azeri, Gobustan, Murov with high gluten content and low DCO had good quality.

  6. Bread Wheat Quality: Some Physical, Chemical and Rheological Characteristics of Syrian and English Bread Wheat Samples

    Directory of Open Access Journals (Sweden)

    Abboud Al-Saleh

    2012-11-01

    Full Text Available The relationships between breadmaking quality, kernel properties (physical and chemical, and dough rheology were investigated using flours from six genotypes of Syrian wheat lines, comprising both commercially grown cultivars and advanced breeding lines. Genotypes were grown in 2008/2009 season in irrigated plots in the Eastern part of Syria. Grain samples were evaluated for vitreousness, test weight, 1000-kernel weight and then milled and tested for protein content, ash, and water content. Dough rheology of the samples was studied by the determination of the mixing time, stability, weakness, resistance and the extensibility of the dough. Loaf baking quality was evaluated by the measurement of the specific weight, resilience and firmness in addition to the sensory analysis. A comparative study between the six Syrian wheat genotypes and two English flour samples was conducted. Significant differences were observed among Syrian genotypes in vitreousness (69.3%–95.0%, 1000-kernel weight (35.2–46.9 g and the test weight (82.2–88.0 kg/hL. All samples exhibited high falling numbers (346 to 417 s for the Syrian samples and 285 and 305 s for the English flours. A significant positive correlation was exhibited between the protein content of the flour and its absorption of water (r = 0.84 **, as well as with the vitreousness of the kernel (r = 0.54 *. Protein content was also correlated with dough stability (r = 0.86 **, extensibility (r = 0.8 **, and negatively correlated with dough weakness (r = −0.69 **. Bread firmness and dough weakness were positively correlated (r = 0.66 **. Sensory analysis indicated Doumah-2 was the best appreciated whilst Doumah 40765 and 46055 were the least appreciated which may suggest their suitability for biscuit preparation rather than bread making.

  7. Nutritional and technological quality of the durum wheat

    Directory of Open Access Journals (Sweden)

    Zina Flagella

    2011-02-01

    Full Text Available Durum wheat quality is a complex system that combines yield characteristics, cultivation conditions and certification requirements. In this review, the technological and nutritional aspects of grain quality were evaluated in relation to the influence of climate and agronomic practices. In particular, the technological quality was investigated with regard to the kind of processed product (pasta, bread, couscous, burghul. The influence of nitrogen and sulphur nutrition, temperature, water regime and organic farming on grain quality was evaluated. Furthermore, the nutritional characteristics of durum wheat related to starch, proteins, lipids, vitamins, fibres and mineral ions content were examined. Special focus was on the antioxidant activity capable of preventing chronic and degenerative diseases thanks to the high content in bioactive compounds, as phenols, tocols, carotenoids and fibres in whole grain. In the light of the new direction of the Community agricultural policy and of the growing interest in human nutrition, two prospects for development of the durum wheat sector were delineated: i developing certified products (PGI, PDO and organic; ii promoting production and processing technologies aimed at increasing the level of bioactive compounds in durum wheat grain and its by-products.

  8. Genetic improvement of drought tolerance in semi-dwarf wheat

    International Nuclear Information System (INIS)

    Water stress is one of the main environmental constraints for the wheat crop. Drought stress from anthesis to maturity, especially if accompanied by heat stress, affects every morphological and physiological aspect of wheat plant and significantly reduces final yield. Genetic improvement for drought tolerance in wheat could be possible through conventional and mutation breeding tools. There is a dire need to identify stress tolerant genotypes which can grow and flourish well under harsh environments (low water requirements). Twelve newly evolved bread wheat genotypes alongwith 3 drought-tolerant commercial check varieties, viz., Sarsabz, Khirman and Chakwal-86 were screened under three water stresses (zero, single and two irrigations). Different yield associated traits were studied. At severe water stress (zero irrigation), six genotypes (BWM-3, NIA-8/7, NIA-9/5, NIA-28/4, NIA-25/5, MSH-36) produced significantly higher grain yield (ranged from 1522 to 2022 kg/ha) than check varieties. These genotypes had higher seed index and less spike sterility at severe stress, which indicated that these genotypes were less responsive to water stress and possessed more tolerance to drought stress. (author)

  9. Associations of wheat with pea can reduce aphid infestations.

    Science.gov (United States)

    Lopes, T; Bodson, B; Francis, F

    2015-06-01

    Increasing plant diversity within crops can be beneficial for pest control. In this field study, the effects of two wheat and pea associations (mixed cropping and strip cropping) on aphid populations were compared with pure stands of both crops by observations on tillers and plants. Pea was more susceptible to infestations than wheat. As expected, the density of aphid colonies was significantly higher in pure stands during the main occurrence periods, compared with associations. Additionally, flying beneficials, such as not only aphidophagous adult ladybirds but also parasitoid, hoverfly and lacewing species that feed on aphids at the larval stage, were monitored using yellow pan traps. At specific times of the sampling season, ladybirds and hoverflies were significantly more abundant in the pure stand of pea and wheat, respectively, compared with associations. Few parasitoids and lacewings were trapped. This study showed that increasing plant diversity within crops by associating cultivated species can reduce aphid infestations, since host plants are more difficult to locate. However, additional methods are needed to attract more efficiently adult beneficials into wheat and pea associations. PMID:26013274

  10. Optimization of wet oxidation pretreatment of wheat straw

    DEFF Research Database (Denmark)

    Schmidt, A.S.; Thomsen, A.B.

    1998-01-01

    The wet oxidation process (water; oxygen and elevated temperature) was investigated under alkaline conditions for fractionation of hemicellulose, cellulose, and lignin from wheat straw. At higher temperature and longer reaction time, a purified cellulose fraction (69% w/w) was produced with high...

  11. Intestinal absorption of chromium as affected by wheat bran

    Energy Technology Data Exchange (ETDEWEB)

    Keim, K.S.; Holloway, C.L.; Hegsted, M.

    1986-03-01

    This study was designed to investigate the influence of dietary fiber, as found in wheat bran, on the absorption of chromium. Twenty male Sprague-Dawley rats were divided into two groups of 10. The control was fed a semi-purified diet containing casein, methionine, cornstarch, sucrose, corn oil, mineral and vitamin mix, and choline bitartrate. The experimental group was fed the same diet but with soft red winter wheat bran added to a level of 35% of the diet at the expense of sucrose. To determine chromium absorption and uptake by selected tissues, rats were fasted for 24 hr, fed 5 g of the respective diet, 2 hr later intubated with 100..mu..Ci of Cr-51of sacrificed 24 hr later. The rats wee housed in metabolic cages after the Cr-51 intubation. The addition of wheat brand to the diet did not significantly affect chromium absorption as measured by percent dose of Cr-51 in the 24 hr urine. The percent dose in the control group was 0.68 +/- 0.20% (mean +/- SEM) and in the experimental group 0.63 +/- 0.24% (mean +/-SEM) (N.S.). The cr-51 uptake of liver, spleen, jejunum, and blood was not statistically different between groups. These results indicate that dietary fiber as found in wheat bran does not impair intestinal absorption of chromium.

  12. Optimization of the dilute maleic acid pretreatment of wheat straw

    NARCIS (Netherlands)

    Kootstra, A.M.J.; Beeftink, H.H.; Scott, E.L.; Sanders, J.P.M.

    2009-01-01

    Background - In this study, the dilute maleic acid pretreatment of wheat straw is optimized, using pretreatment time, temperature and maleic acid concentration as design variables. A central composite design was applied to the experimental set up. The response factors used in this study are: (1) glu

  13. Molecular breeding for drought tolerance in plants: wheat perspective

    International Nuclear Information System (INIS)

    Wheat (Triticum aestivum L.em Thell.) is the first important and strategic cereal crop for the majority of world,s populations. It is the most important staple food of about two billion people (36% of the world population). Due to industrialization, erosion, urbanization, compaction, and the increase in acidity as a result of fertilization, there is a decrease in the available space for agriculture. Environmental conditions such as increased salinity, drought, and freezing cause adverse effects on the growth and productivity of cereal crops such as wheat (Triticum aestivum L.). Though grown under a wide range of climates and soils, wheat is best adapted to temperate regions. Whether the cropping occurs in the temperate areas or the tropics, both types of environments are affected by global warming and the destabilizing effects that it causes, none more serious than the attendant increased variability in rainfall and temperature. Due to the limited insight into the physiological basis of drought tolerance in wheat, a better understanding of some of the mechanisms that enable the plants to adapt to stress and maintain growth during stress periods would help in breeding for drought tolerance. On the other hand, understanding the genetic and genome organization using molecular markers is of great value for plant breeding purposes. (author)

  14. Registration of ‘Joe’ hard white winter wheat

    Science.gov (United States)

    ‘Joe’, a hard white winter wheat (Triticum aestivum L.) was developed at the Agricultural Research Center-Hays, Kansas State University and released by the Kansas Agricultural Experiment Station in 2015. Joe was selected from a two-way cross of KS04HW101-3/KS04HW119-3 made in 2005 at Hays, KS. The ...

  15. Wheat rusts in the United States in 2015

    Science.gov (United States)

    In 2015 wheat stripe rust caused by Puccinia striiformis f. sp. graminis was widespread throughout the United States. Cool temperatures and abundant rainfall in the southern Great Plains allowed stripe rust to become widely established and spread throughout the Great Plains and eastern United States...

  16. COMPUTER APPROACHES TO WHEAT HIGH-THROUGHPUT PHENOTYPING

    Directory of Open Access Journals (Sweden)

    Afonnikov D.

    2012-08-01

    Full Text Available The growing need for rapid and accurate approaches for large-scale assessment of phenotypic characters in plants becomes more and more obvious in the studies looking into relationships between genotype and phenotype. This need is due to the advent of high throughput methods for analysis of genomes. Nowadays, any genetic experiment involves data on thousands and dozens of thousands of plants. Traditional ways of assessing most phenotypic characteristics (those with reliance on the eye, the touch, the ruler are little effective on samples of such sizes. Modern approaches seek to take advantage of automated phenotyping, which warrants a much more rapid data acquisition, higher accuracy of the assessment of phenotypic features, measurement of new parameters of these features and exclusion of human subjectivity from the process. Additionally, automation allows measurement data to be rapidly loaded into computer databases, which reduces data processing time.In this work, we present the WheatPGE information system designed to solve the problem of integration of genotypic and phenotypic data and parameters of the environment, as well as to analyze the relationships between the genotype and phenotype in wheat. The system is used to consolidate miscellaneous data on a plant for storing and processing various morphological traits and genotypes of wheat plants as well as data on various environmental factors. The system is available at www.wheatdb.org. Its potential in genetic experiments has been demonstrated in high-throughput phenotyping of wheat leaf pubescence.

  17. Molecular Diversity and Genetic Structure of Durum Wheat Landraces

    Directory of Open Access Journals (Sweden)

    GULNAR SHIKHSEYIDOVA

    2015-06-01

    Full Text Available To determine the genetic diversity of durum wheat, 41 accessions from Morocco, Ethiopia, Turkey, Lebanon, Kazakhstan, China, and Mongolia were analyzed through Inter-Simple Sequence Repeats (ISSR molecular markers. Out of the used twenty primers, 15 primers that included a considerable polymorphism were selected for the analyses. Among the genotypes under study, 163 fragments (73.7% were polymorph. Several indexes were used to determine the most appropriate primers. While UBC812, UBC864, UBC840, and UBC808 primers were among those markers which produced the highest number of bands and polymorphic bands, they also dedicated the highest rate of polymorphic index content (PIC. These primers also possessed the highest amounts of effective multiplex ratio (EMR and marker index (MI. Therefore, these primers can be recommended for genetic evaluation of the durum wheat. The results of cluster analysis and principle component analysis indicated that the observed genetic diversity in wheat materials under study is geographically structured. The results also indicated that the genetic diversity index based on ISSR markers was higher for Turkey, Lebanon, Morocco, and Ethiopia accessions than for other countries. The high level of polymorphism in this collections durum wheat would agree with the suggestion that Fertile Crescent and parts of Africa are first possible diversity center of this crop.

  18. Evapotranspiration of deficit irrigated sorghum and winter wheat

    Science.gov (United States)

    Deficit irrigation commonly is used in regions with reduced or limited irrigation capacity to increase water use efficiency (WUE). This research measured winter wheat (Triticum aestivum L.) and sorghum (Sorghum bicolor L. Moench) water use (ET) and yields so WUE could be determined. Two precision ...

  19. Water absorbance and thermal properties of sulfated wheat gluten films

    Science.gov (United States)

    Wheat gluten films of varying thicknesses formed at 30C to 70C were treated with cold sulfuric acid to produce sulfated gluten films. Chemical, thermal, thermal stability, and water uptake properties were characterized for neat and sulfated films. The sulfated gluten films were able ...

  20. CD 1805 - Wheat with flour characteristics for cookie baking

    Directory of Open Access Journals (Sweden)

    Francisco de Assis Franco

    2016-03-01

    Full Text Available CD 1805, indicated for the wheat growing in Regions 1, 2 and 3 in the states of Rio Grande do Sul, Santa Catarina and Paraná. The cultivar has quality standards for cookie production and high yield performance with a mean of 3899 kg ha-1, exceeding the controls by 4%.

  1. Phosphorus Uptake from Rhizosphere Soilby Two Wheat Cultivars

    Institute of Scientific and Technical Information of China (English)

    MAJIAN; T.S.GAHOONIA; 等

    1998-01-01

    Inorganic soil phosphorus extractable with sodium bicarbonate(NaHCO3-Pi),soil pH and root hairs length and density in the rhizosphere of two winter wheat cultivars (Tritium aestivum L.cv.Shichum,Sleipner)grown on a high pH Chinese silt loam(52.7 mg NaHCO3-Pikg-1) and a Danish sandy loam(43.4mg NaHCO3-Pi kg-1)wer studied to assess how these wheat cultivars differed in phosphorus uptake.The rhizosphere soil pH of two wheat cultivars grown on the two soils were fairly unchanged with increasing distrance from the roo surface.However the root hairs of Shichun were 2.1 times longer than those of Sleipner,Root surface area(RSA) of Shichun increased by 192% due to root hairs whereas root hairs of Sleipner increased RSA by 68% only.Hence the root system of Shichun was in contact with more soil than that of Sleipner,even though Sleipner had a longer root,Grown at the lower pH and level of NaHCO3-Pi in the Danish soil Shichun absorbed more inorganic phosphorus than Sleipner whereas at the higher pH and level of NaHCO3-Pi in the Chinese soil there was no phosphorus uptake difference between the two wheat culivars.

  2. A bushel Half Full: Reforming the Canadian Wheat Board

    OpenAIRE

    Sylvain Charlebois; Richard Pedde

    2008-01-01

    The Canadian Wheat Board (CWB) has been earning poor financial returns for farmers over the last three years, based on our benchmarking analysis. Reforms are required, including more transparency in reporting financial returns to farmers, and greater accountability on the part of CWB management to the farmer-elected board of directors.

  3. Wheat aleurone polyphenols increase plasma eicosapentaenoic acid in rats

    Directory of Open Access Journals (Sweden)

    Fayçal Ounnas

    2014-08-01

    Full Text Available Methods: These studies were designed to assess whether wheat polyphenols (mainly ferulic acid [FA] increased the very-long-chain omega-3 fatty acids (VLC n-3 [eicosapentaenoic acid (EPA and docosahexaenoic acid (DHA] in rats. Wheat aleurone (WA was used as a dietary source of wheat polyphenols. Two experiments were performed; in the first one, the rats were fed WA or control pellets (CP in presence of linseed oil (LO to provide alpha-linolenic acid (ALA, the precursor of VLC n-3. In the second one, the rats were fed WA or CP in presence of control oil (CO without ALA. The concentrations of phenolic acid metabolites in urine were also investigated. Results: The urinary concentration of conjugated FA increased with WA ingestion (p<0.05. Plasma EPA increased by 25% (p<0.05 with WA in the CO group but not in the LO group. In contrast, there was no effect of WA on plasma DHA and omega-6 fatty acids (n-6. Finally, both n-3 and n-6 in the liver remained unchanged by the WA. Conclusion: These results suggest that WA consumption has a significant effect on EPA in plasma without affecting n-6. Subsequent studies are required to examine whether these effects may explain partly the health benefits associated with whole wheat consumption.

  4. Numerical Modeling of Wheat Seeds in Microwave Field

    Directory of Open Access Journals (Sweden)

    COMAN Ovidiu

    2014-05-01

    Full Text Available The main objective of our research was to develop a model using the numerical simulation software - Comsol Multiphysics for the drying process of wheat seeds. A number of simulations were made in order to analyze the increase of temperature calculated in the dielectric material, the electric field intensity and total absorbed power.

  5. Nucleolus organizer regions (Nor loci) of Chinese wheats

    Institute of Scientific and Technical Information of China (English)

    Cedric E.May; 辛志勇

    1996-01-01

    Nucleolus organizer regions (Nor loci) of a range of Chinese wheat landraces and cultivars (Triticum aestivum L. em Thell.) were analysed using genomic DNA extracted from leaves. Only two allelic variants of the Nor-B1 locus were found on chromosome 1B (Nor-B1a and Nor-B1g), while Nor-B1g was probably introduced from North America in the early 1960s. The even more recent introduction of the rye allele Nor-R1 in the early 1980s was also revealed. Eight allelic variants of the Nor-B2 locus on chromosome 6B (Nor-B2a, b, d, f, h, o, p and s) were identified. A Chinese origin for the a, d, f, o, p and s alkies is evident although the d allele was successfully introduced into Australian wheats in the early 1900s. Nor-B2h and Nor-B2b are again very recent introductions into Chinese wheat breeding programs, the former from CIMMYT wheats and the latter in association with the introduction of the 1RS/1BL translocation from Europe. On the basis of the presence of different combinations of Nor-B1 and Nor-B2 alleles

  6. Aspects of durable resistance in wheat to yellow rust.

    NARCIS (Netherlands)

    Danial, D.L.

    1994-01-01

    In Kenya, the number of virulence factors of the yellow rust populations showed a considerable increase and a wide variability. Selecting for complete to near complete resistance to yellow rust and other cereal rust diseases, was followed by a rapid erosion of resistance.Partial resistance in wheat

  7. Cost of Forward Contracting Hard Red Winter Wheat

    OpenAIRE

    Townsend, John P.; Brorsen, B. Wade

    1997-01-01

    Two methods were used to estimate the cost of forward contracting hard red winter wheat. One hundred days before delivery, the estimated cost of forward contracting ranged from six cents/bu. To eight cents/bu. Thus, further evidence is provided that the cost of forward contracting grain is not zero.

  8. Ethanol production from steam-explosion pretreated wheat straw.

    Science.gov (United States)

    Ballesteros, Ignacio; Negro, Ma José; Oliva, José Miguel; Cabañas, Araceli; Manzanares, Paloma; Ballesteros, Mercedes

    2006-01-01

    Bioconversion of cereal straw to bioethanol is becoming an attractive alternative to conventional fuel ethanol production from grains. In this work, the best operational conditions for steam-explosion pretreatment of wheat straw for ethanol production by a simultaneous saccharification and fermentation process were studied, using diluted acid [H2SO4 0.9% (w/w)] and water as preimpregnation agents. Acid- or water-impregnated biomass was steam-exploded at different temperatures (160-200 degrees C) and residence times (5, 10, and 20 min). Composition of solid and filtrate obtained after pretreatment, enzymatic digestibility and ethanol production of pretreated wheat straw at different experimental conditions was analyzed. The best pretreatment conditions to obtain high conversion yield to ethanol (approx 80% of theoretical) of cellulose-rich residue after steam-explosion were 190 degrees C and 10 min or 200 degrees C and 5 min, in acid-impregnated straw. However, 180 degrees C for 10 min in acid-impregnated biomass provided the highest ethanol yield referred to raw material (140 L/t wheat straw), and sugars recovery yield in the filtrate (300 g/kg wheat straw).

  9. Arabinoxylans concentrates from wheat bran by electrostatic separation

    NARCIS (Netherlands)

    Wang, J.; Smits, E.; Boom, R.M.; Schutyser, M.A.I.

    2015-01-01

    Electrostatic separation has been recently proposed as a novel method to fractionate wheat bran into valuable ingredient fractions. However, systematic study into the influence of parameters on electrostatic separation was lacking. Therefore, this study aimed at a more detailed evaluation of electro

  10. Wheat and barley seed systems in Ethiopia and Syria

    NARCIS (Netherlands)

    Bishaw, Z.

    2004-01-01

    Keywords: Wheat,Triticumspp., Barley,Hordeumvulgare L., Seed Systems, Formal Seed Sector, Informal Seed Sector, National Seed Program, Seed Source, Seed Selection, Seed Management, Seed Quality,

  11. Leaf senescence and nutrient remobilisation in barley and wheat

    DEFF Research Database (Denmark)

    Gregersen, P L; Holm, P B; Krupinska, K

    2008-01-01

    Extensive studies have been undertaken on senescence processes in barley and wheat and their importance for the nitrogen use efficiency of these crop plants. During the senescence processes, proteins are degraded and nutrients are re-mobilised from senescing leaves to other organs, especially the...

  12. Determination of Resistance to Lodging by Stem Strength in Wheat

    Institute of Scientific and Technical Information of China (English)

    XIAO Shi-he; ZHANG Xiu-ying; YAN Chang-sheng; ZHANG Wen-xiang; HAI Lin; GUO Hui-jun

    2002-01-01

    Stem strength affects directly the resistance of wheat plant to lodging. Unfortunately, the determination of the stem strength is not perfect for wheat breeding and genetics up to now. In this study a prostrate tester was engaged for testing the stem strength of 661 wheat varieties and of 1183 single plants from a F2 population. The results showed that the suitable time to determine the stem strength should be from milk stage to dough ripe stage. The stem strength at the maturity would decrease and it was not easy to distinguish the difference among the varieties. The single plant with a strong stem could be judged using the prostrate tester from the F2 population. By testing the stem strength and anatomic characters of 30 varieties, a significant negative relationship between the pith diameter of the upper internodes and the stem strength was observed. On the other hand, there was a significant positive relationship between the stem diameter of the lower internodes and stem strength. It was suggested that a wheat breeder should breed the cuitivar with a strong stem, because the spike weight and biomass yield were significantly related to the stem strength.

  13. Intestinal absorption of chromium as affected by wheat bran

    International Nuclear Information System (INIS)

    This study was designed to investigate the influence of dietary fiber, as found in wheat bran, on the absorption of chromium. Twenty male Sprague-Dawley rats were divided into two groups of 10. The control was fed a semi-purified diet containing casein, methionine, cornstarch, sucrose, corn oil, mineral and vitamin mix, and choline bitartrate. The experimental group was fed the same diet but with soft red winter wheat bran added to a level of 35% of the diet at the expense of sucrose. To determine chromium absorption and uptake by selected tissues, rats were fasted for 24 hr, fed 5 g of the respective diet, 2 hr later intubated with 100μCi of Cr-51of sacrificed 24 hr later. The rats wee housed in metabolic cages after the Cr-51 intubation. The addition of wheat brand to the diet did not significantly affect chromium absorption as measured by percent dose of Cr-51 in the 24 hr urine. The percent dose in the control group was 0.68 +/- 0.20% (mean +/- SEM) and in the experimental group 0.63 +/- 0.24% (mean +/-SEM) (N.S.). The cr-51 uptake of liver, spleen, jejunum, and blood was not statistically different between groups. These results indicate that dietary fiber as found in wheat bran does not impair intestinal absorption of chromium

  14. Wheat seed enhancement by vitamin and hormonal priming

    International Nuclear Information System (INIS)

    Seed priming has proven beneficial in many important agricultural crops. The present study was conducted to explore the role (if any) of hormonal and vitamin seed priming to improve the germination, seedling emergence, early seedling establishment, electrolyte leakage and nutrients uptake in wheat seedlings. The wheat seeds were soaked for 48 hours in aerated solution of salicylic acid, ascorbic acid, kinetin and GA3 with 20 ppm concentration of each solution, whereas untreated seeds were taken as control. Seed priming with ascorbic acid resulted in maximum final germination and emergence percentage (FGP and FEP), radical and plumule length, root and shoot length, number of secondary roots, root shoot ratio, root dry weight, shoot dry weight and seedling dry weight compared to control (untreated seeds). Minimum mean germination and emergence time (MGT and MET) was recorded in seeds primed with kinetin and GA3. While in case of biochemical attributes, seedling potassium contents were decreased by hormonal seed priming while total soluble sugars were increased by salicylic acid and ascorbic acid seed priming. Hormonal seed priming had non-significant effect on phosphorus seedling contents. Untreated (Control) seeds showed maximum electrical conductivity at 0.5, 1, 2, 6, 12 and 24 h after inbibition than primed seeds against the minimum electrical conductivity that was recorded in seeds primed with salicylic acid and ascorbic acid. In conclusion, the wheat seeds primed with 20 ppm solution of ascorbic acid may be used for wheat seed invigoration. (author)

  15. Nutritional and technological quality of the durum wheat

    Directory of Open Access Journals (Sweden)

    Zina Flagella

    Full Text Available Durum wheat quality is a complex system that combines yield characteristics, cultivation conditions and certification requirements. In this review, the technological and nutritional aspects of grain quality were evaluated in relation to the influence of climate and agronomic practices. In particular, the technological quality was investigated with regard to the kind of processed product (pasta, bread, couscous, burghul. The influence of nitrogen and sulphur nutrition, temperature, water regime and organic farming on grain quality was evaluated. Furthermore, the nutritional characteristics of durum wheat related to starch, proteins, lipids, vitamins, fibres and mineral ions content were examined. Special focus was on the antioxidant activity capable of preventing chronic and degenerative diseases thanks to the high content in bioactive compounds, as phenols, tocols, carotenoids and fibres in whole grain. In the light of the new direction of the Community agricultural policy and of the growing interest in human nutrition, two prospects for development of the durum wheat sector were delineated: i developing certified products (PGI, PDO and organic; ii promoting production and processing technologies aimed at increasing the level of bioactive compounds in durum wheat grain and its by-products.

  16. The Wheat Puroindoline Genes Confer Fungal Resistance in Transgenic Corn

    Science.gov (United States)

    Puroindoline a and b (Pina and Pinb), together make up the functional components of the wheat grain hardness locus (Ha) and have antimicrobial properties. The antifungal activity of puroindoline proteins, PINA and PINB, has been demonstrated in vitro and in vivo. In this study Pina and P...

  17. [Occupational asthma related to wheat. Presentation of one case].

    Science.gov (United States)

    Galindo-Pacheco, Lucy Vania; Toral-Villanueva, Rodrigo; Segura-Méndez, Nora Hilda

    2013-01-01

    Allergy to wheat proteins is the most common type of occupational asthma caused by cereals. Its incidence based on international reports is about 1-2.4/1000 cases among workers per year. In Mexico there is an underdiagnosis of occupational asthma > 99%. During the period 2009-2012 we recorded 5 cases of occupational asthma, 40% of them caused by cereals. This is the case of a 38 year old male, baker for 24 years exposed to wheat flour. In his workplace he used to wear surgical mask and there are no exhaust fans. He initiated 10 years ago with sneezing, itching, hyaline rhinorrhea and nasal obstruction. The following year he presented mild to moderate dyspnea, chest tightness, cough and wheezing during working hours, which improved during his days off. Pulmonary function tests were confirmatory of asthma, with negative skin prick tests to aeroallergens. Specific bronchial challenge was performed with wheat flour resulting positive with a decrease in VEF1 greater than 20%. Pharmacological treatment was provided and was sent to occupational medicine service for evaluation. The case was qualified as an occupational disease with a permanent partial disability of 25%, receiving a financial compensation. He returned to work in the same company but in a different area without wheat flour exposure. The diagnosis of occupational asthma is mainly clinical, according to Brooks¥ criteria, and a bronchial positive challenge test will confirms the diagnosis. PMID:24008108

  18. Chlorophyll a fluorescence to phenotype wheat genotypes for heat tolerance

    DEFF Research Database (Denmark)

    Sharma, Dew Kumari; Andersen, Sven Bode; Ottosen, Carl-Otto;

    In prospects of global climate change, heat stress is a rising constraint for the productivity of wheat (Triticum aestivum L.). It is a heat-susceptible crop beyond 17-23oC temperature throughout its phenological stages, flowering phase being the most sensitive stage. Chlorophyll a fluorescence...

  19. Study on Prevalence of Mycoflora in Wheat Seeds

    Directory of Open Access Journals (Sweden)

    Pratishtha Adhikari

    2016-01-01

    Full Text Available Forty seed sample of wheat (Triticum aestivum were collected from four locations viz. Chitwan, Kaski, Banke and Lalitpur and tested by blotter method at laboratory during 2013 for determining fungal pathogens associated with wheat seeds in Nepal. Eighteen species representing thirteen genera of fungi were recovered from the seed. Alternaria alternata and Bipolaris sorokiniana were predominant in all the varieties/genotypes from all the locations, where B. sorokiniana was strongly pathogenic in wheat crop. Percentage frequency and type of fungi detected varied with variety and locations. Bipolaris sorokiniana was highest (64.40% in Banke than remaining three locations. Seeds of Chitwan had lowest percentage (5.50% of seed infection as compared to other locations. Relative abundance of Alternaria alternata (55.10% was highest as it was the most prevalent component of seed borne mycoflora, followed by Bipolaris sorokiniana (34.69% and Cladosporium herbarum (7.19%. Differences in quantity of precipitation and relative humidity might be the possible reason for variation in frequency and type of fungi detected in wheat seeds of four locations.

  20. Wheat and barley exposure to nanoceria: Implications for agricultural productivity

    Science.gov (United States)

    The impacts of man-made nanomaterials on agricultural productivity are not yet well understood. A soil microcosm study was performed to assess the physiological, phenological, and yield responses of wheat (Triticum aestivum) and barley (Hordeum vulgare L.) exposed to nanoceria (n...