Sample records for affymetrix arrays expanding

  1. Genotyping and annotation of Affymetrix SNP arrays

    DEFF Research Database (Denmark)

    Lamy, Philippe; Andersen, Claus Lindbjerg; Wikman, Friedrik;


    allows us to annotate SNPs that have poor performance, either because of poor experimental conditions or because for one of the alleles the probes do not behave in a dose-response manner. Generally, our method agrees well with a method developed by Affymetrix. When both methods make a call they agree...

  2. FGX : a frequentist gene expression index for Affymetrix arrays

    NARCIS (Netherlands)

    Purutçuoğlu, Vilda; Wit, Ernst


    We consider a new frequentist gene expression index for Affymetrix oligonucleotide DNA arrays, using a similar probe intensity model as suggested previously, called the Bayesian gene expression index (BGX). According to this model, the perfect match and mismatch values are assumed to be correlated a

  3. Pooled DNA genotyping on Affymetrix SNP genotyping arrays

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    Owen Michael J


    Full Text Available Abstract Background Genotyping technology has advanced such that genome-wide association studies of complex diseases based upon dense marker maps are now technically feasible. However, the cost of such projects remains high. Pooled DNA genotyping offers the possibility of applying the same technologies at a fraction of the cost, and there is some evidence that certain ultra-high throughput platforms also perform with an acceptable accuracy. However, thus far, this conclusion is based upon published data concerning only a small number of SNPs. Results In the current study we prepared DNA pools from the parents and from the offspring of 30 parent-child trios that have been extensively genotyped by the HapMap project. We analysed the two pools with Affymetrix 10 K Xba 142 2.0 Arrays. The availability of the HapMap data allowed us to validate the performance of 6843 SNPs for which we had both complete individual and pooled genotyping data. Pooled analyses averaged over 5–6 microarrays resulted in highly reproducible results. Moreover, the accuracy of estimating differences in allele frequency between pools using this ultra-high throughput system was comparable with previous reports of pooling based upon lower throughput platforms, with an average error for the predicted allelic frequencies differences between the two pools of 1.37% and with 95% of SNPs showing an error of Conclusion Genotyping thousands of SNPs with DNA pooling using Affymetrix microarrays produces highly accurate results and can be used for genome-wide association studies.

  4. Identifying the impact of G-quadruplexes on Affymetrix 3' arrays using cloud computing. (United States)

    Memon, Farhat N; Owen, Anne M; Sanchez-Graillet, Olivia; Upton, Graham J G; Harrison, Andrew P


    A tetramer quadruplex structure is formed by four parallel strands of DNA/ RNA containing runs of guanine. These quadruplexes are able to form because guanine can Hoogsteen hydrogen bond to other guanines, and a tetrad of guanines can form a stable arrangement. Recently we have discovered that probes on Affymetrix GeneChips that contain runs of guanine do not measure gene expression reliably. We associate this finding with the likelihood that quadruplexes are forming on the surface of GeneChips. In order to cope with the rapidly expanding size of GeneChip array datasets in the public domain, we are exploring the use of cloud computing to replicate our experiments on 3' arrays to look at the effect of the location of G-spots (runs of guanines). Cloud computing is a recently introduced high-performance solution that takes advantage of the computational infrastructure of large organisations such as Amazon and Google. We expect that cloud computing will become widely adopted because it enables bioinformaticians to avoid capital expenditure on expensive computing resources and to only pay a cloud computing provider for what is used. Moreover, as well as financial efficiency, cloud computing is an ecologically-friendly technology, it enables efficient data-sharing and we expect it to be faster for development purposes. Here we propose the advantageous use of cloud computing to perform a large data-mining analysis of public domain 3' arrays.

  5. Improvements to previous algorithms to predict gene structure and isoform concentrations using Affymetrix Exon arrays

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    Aramburu Ander


    Full Text Available Abstract Background Exon arrays provide a way to measure the expression of different isoforms of genes in an organism. Most of the procedures to deal with these arrays are focused on gene expression or on exon expression. Although the only biological analytes that can be properly assigned a concentration are transcripts, there are very few algorithms that focus on them. The reason is that previously developed summarization methods do not work well if applied to transcripts. In addition, gene structure prediction, i.e., the correspondence between probes and novel isoforms, is a field which is still unexplored. Results We have modified and adapted a previous algorithm to take advantage of the special characteristics of the Affymetrix exon arrays. The structure and concentration of transcripts -some of them possibly unknown- in microarray experiments were predicted using this algorithm. Simulations showed that the suggested modifications improved both specificity (SP and sensitivity (ST of the predictions. The algorithm was also applied to different real datasets showing its effectiveness and the concordance with PCR validated results. Conclusions The proposed algorithm shows a substantial improvement in the performance over the previous version. This improvement is mainly due to the exploitation of the redundancy of the Affymetrix exon arrays. An R-Package of SPACE with the updated algorithms have been developed and is freely available.

  6. EzArray: A web-based highly automated Affymetrix expression array data management and analysis system

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    Zhu Yuelin


    Full Text Available Abstract Background Though microarray experiments are very popular in life science research, managing and analyzing microarray data are still challenging tasks for many biologists. Most microarray programs require users to have sophisticated knowledge of mathematics, statistics and computer skills for usage. With accumulating microarray data deposited in public databases, easy-to-use programs to re-analyze previously published microarray data are in high demand. Results EzArray is a web-based Affymetrix expression array data management and analysis system for researchers who need to organize microarray data efficiently and get data analyzed instantly. EzArray organizes microarray data into projects that can be analyzed online with predefined or custom procedures. EzArray performs data preprocessing and detection of differentially expressed genes with statistical methods. All analysis procedures are optimized and highly automated so that even novice users with limited pre-knowledge of microarray data analysis can complete initial analysis quickly. Since all input files, analysis parameters, and executed scripts can be downloaded, EzArray provides maximum reproducibility for each analysis. In addition, EzArray integrates with Gene Expression Omnibus (GEO and allows instantaneous re-analysis of published array data. Conclusion EzArray is a novel Affymetrix expression array data analysis and sharing system. EzArray provides easy-to-use tools for re-analyzing published microarray data and will help both novice and experienced users perform initial analysis of their microarray data from the location of data storage. We believe EzArray will be a useful system for facilities with microarray services and laboratories with multiple members involved in microarray data analysis. EzArray is freely available from

  7. Preferred analysis methods for Affymetrix GeneChips. II. An expanded, balanced, wholly-defined spike-in dataset

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    Zhu Qianqian


    Full Text Available Abstract Background Concomitant with the rise in the popularity of DNA microarrays has been a surge of proposed methods for the analysis of microarray data. Fully controlled "spike-in" datasets are an invaluable but rare tool for assessing the performance of various methods. Results We generated a new wholly defined Affymetrix spike-in dataset consisting of 18 microarrays. Over 5700 RNAs are spiked in at relative concentrations ranging from 1- to 4-fold, and the arrays from each condition are balanced with respect to both total RNA amount and degree of positive versus negative fold change. We use this new "Platinum Spike" dataset to evaluate microarray analysis routes and contrast the results to those achieved using our earlier Golden Spike dataset. Conclusions We present updated best-route methods for Affymetrix GeneChip analysis and demonstrate that the degree of "imbalance" in gene expression has a significant effect on the performance of these methods.

  8. Comprehensive survey of SNPs in the Affymetrix exon array using the 1000 Genomes dataset.

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    Eric R Gamazon

    Full Text Available Microarray gene expression data has been used in genome-wide association studies to allow researchers to study gene regulation as well as other complex phenotypes including disease risks and drug response. To reach scientifically sound conclusions from these studies, however, it is necessary to get reliable summarization of gene expression intensities. Among various factors that could affect expression profiling using a microarray platform, single nucleotide polymorphisms (SNPs in target mRNA may lead to reduced signal intensity measurements and result in spurious results. The recently released 1000 Genomes Project dataset provides an opportunity to evaluate the distribution of both known and novel SNPs in the International HapMap Project lymphoblastoid cell lines (LCLs. We mapped the 1000 Genomes Project genotypic data to the Affymetrix GeneChip Human Exon 1.0ST array (exon array, which had been used in our previous studies and for which gene expression data had been made publicly available. We also evaluated the potential impact of these SNPs on the differentially spliced probesets we had identified previously. Though the 1000 Genomes Project data allowed a comprehensive survey of the SNPs in this particular array, the same approach can certainly be applied to other microarray platforms. Furthermore, we present a detailed catalogue of SNP-containing probesets (exon-level and transcript clusters (gene-level, which can be considered in evaluating findings using the exon array as well as benefit the design of follow-up experiments and data re-analysis.

  9. Discovery and mapping of single feature polymorphisms in wheat using Affymetrix arrays

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    Hu Shengwa


    Full Text Available Abstract Background Wheat (Triticum aestivum L. is a staple food crop worldwide. The wheat genome has not yet been sequenced due to its huge genome size (~17,000 Mb and high levels of repetitive sequences; the whole genome sequence may not be expected in the near future. Available linkage maps have low marker density due to limitation in available markers; therefore new technologies that detect genome-wide polymorphisms are still needed to discover a large number of new markers for construction of high-resolution maps. A high-resolution map is a critical tool for gene isolation, molecular breeding and genomic research. Single feature polymorphism (SFP is a new microarray-based type of marker that is detected by hybridization of DNA or cRNA to oligonucleotide probes. This study was conducted to explore the feasibility of using the Affymetrix GeneChip to discover and map SFPs in the large hexaploid wheat genome. Results Six wheat varieties of diverse origins (Ning 7840, Clark, Jagger, Encruzilhada, Chinese Spring, and Opata 85 were analyzed for significant probe by variety interactions and 396 probe sets with SFPs were identified. A subset of 164 unigenes was sequenced and 54% showed polymorphism within probes. Microarray analysis of 71 recombinant inbred lines from the cross Ning 7840/Clark identified 955 SFPs and 877 of them were mapped together with 269 simple sequence repeat markers. The SFPs were randomly distributed within a chromosome but were unevenly distributed among different genomes. The B genome had the most SFPs, and the D genome had the least. Map positions of a selected set of SFPs were validated by mapping single nucleotide polymorphism using SNaPshot and comparing with expressed sequence tags mapping data. Conclusion The Affymetrix array is a cost-effective platform for SFP discovery and SFP mapping in wheat. The new high-density map constructed in this study will be a useful tool for genetic and genomic research in wheat.

  10. Application of affymetrix array and massively parallel signature sequencing for identification of genes involved in prostate cancer progression

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    Eichner Lillian J


    Full Text Available Abstract Background Affymetrix GeneChip Array and Massively Parallel Signature Sequencing (MPSS are two high throughput methodologies used to profile transcriptomes. Each method has certain strengths and weaknesses; however, no comparison has been made between the data derived from Affymetrix arrays and MPSS. In this study, two lineage-related prostate cancer cell lines, LNCaP and C4-2, were used for transcriptome analysis with the aim of identifying genes associated with prostate cancer progression. Methods Affymetrix GeneChip array and MPSS analyses were performed. Data was analyzed with GeneSpring 6.2 and in-house perl scripts. Expression array results were verified with RT-PCR. Results Comparison of the data revealed that both technologies detected genes the other did not. In LNCaP, 3,180 genes were only detected by Affymetrix and 1,169 genes were only detected by MPSS. Similarly, in C4-2, 4,121 genes were only detected by Affymetrix and 1,014 genes were only detected by MPSS. Analysis of the combined transcriptomes identified 66 genes unique to LNCaP cells and 33 genes unique to C4-2 cells. Expression analysis of these genes in prostate cancer specimens showed CA1 to be highly expressed in bone metastasis but not expressed in primary tumor and EPHA7 to be expressed in normal prostate and primary tumor but not bone metastasis. Conclusion Our data indicates that transcriptome profiling with a single methodology will not fully assess the expression of all genes in a cell line. A combination of transcription profiling technologies such as DNA array and MPSS provides a more robust means to assess the expression profile of an RNA sample. Finally, genes that were differentially expressed in cell lines were also differentially expressed in primary prostate cancer and its metastases.

  11. OpenADAM: an open source genome-wide association data management system for Affymetrix SNP arrays

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    Sham P C


    Full Text Available Abstract Background Large scale genome-wide association studies have become popular since the introduction of high throughput genotyping platforms. Efficient management of the vast array of data generated poses many challenges. Description We have developed an open source web-based data management system for the large amount of genotype data generated from the Affymetrix GeneChip® Mapping Array and Affymetrix Genome-Wide Human SNP Array platforms. The database supports genotype calling using DM, BRLMM, BRLMM-P or Birdseed algorithms provided by the Affymetrix Power Tools. The genotype and corresponding pedigree data are stored in a relational database for efficient downstream data manipulation and analysis, such as calculation of allele and genotype frequencies, sample identity checking, and export of genotype data in various file formats for analysis using commonly-available software. A novel method for genotyping error estimation is implemented using linkage disequilibrium information from the HapMap project. All functionalities are accessible via a web-based user interface. Conclusion OpenADAM provides an open source database system for management of Affymetrix genome-wide association SNP data.

  12. A simple optimization can improve the performance of single feature polymorphism detection by Affymetrix expression arrays

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    Fujisawa Hironori


    Full Text Available Abstract Background High-density oligonucleotide arrays are effective tools for genotyping numerous loci simultaneously. In small genome species (genome size: Results We compared the single feature polymorphism (SFP detection performance of whole-genome and transcript hybridizations using the Affymetrix GeneChip® Rice Genome Array, using the rice cultivars with full genome sequence, japonica cultivar Nipponbare and indica cultivar 93-11. Both genomes were surveyed for all probe target sequences. Only completely matched 25-mer single copy probes of the Nipponbare genome were extracted, and SFPs between them and 93-11 sequences were predicted. We investigated optimum conditions for SFP detection in both whole genome and transcript hybridization using differences between perfect match and mismatch probe intensities of non-polymorphic targets, assuming that these differences are representative of those between mismatch and perfect targets. Several statistical methods of SFP detection by whole-genome hybridization were compared under the optimized conditions. Causes of false positives and negatives in SFP detection in both types of hybridization were investigated. Conclusions The optimizations allowed a more than 20% increase in true SFP detection in whole-genome hybridization and a large improvement of SFP detection performance in transcript hybridization. Significance analysis of the microarray for log-transformed raw intensities of PM probes gave the best performance in whole genome hybridization, and 22,936 true SFPs were detected with 23.58% false positives by whole genome hybridization. For transcript hybridization, stable SFP detection was achieved for highly expressed genes, and about 3,500 SFPs were detected at a high sensitivity (> 50% in both shoot and young panicle transcripts. High SFP detection performances of both genome and transcript hybridizations indicated that microarrays of a complex genome (e.g., of Oryza sativa can be

  13. ChIP-on-chip analysis methods for Affymetrix tiling arrays. (United States)

    Yoder, Sean J


    Although the ChIP-sequencing has gained significant attraction recently, ChIP analysis using microarrays is still an attractive option due to the low cost, ease of analysis, and access to legacy and public data sets. The analysis of ChIP-Chip data entails a multistep approach that requires several different applications to progress from the initial stages of raw data analysis to the identification and characterization of ChIP binding sites. There are multiple approaches to data analysis and there are several applications available for each stage of the analysis pipeline. Each application must be evaluated for its suitability for the particular experiment as well as the investigator's background with computational tools. This chapter is a review of the commonly available applications for Affymetrix ChIP-Chip data analysis, as well as the general workflow of a ChIP-Chip analysis approach. The purpose of the chapter is to allow the researcher to better select the appropriate applications and provide them with the direction necessary to proceed with a ChIP-Chip analysis.

  14. Evaluating the performance of Affymetrix SNP Array 6.0 platform with 400 Japanese individuals

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    Uehara Yasuka


    Full Text Available Abstract Background With improvements in genotyping technologies, genome-wide association studies with hundreds of thousands of SNPs allow the identification of candidate genetic loci for multifactorial diseases in different populations. However, genotyping errors caused by genotyping platforms or genotype calling algorithms may lead to inflation of false associations between markers and phenotypes. In addition, the number of SNPs available for genome-wide association studies in the Japanese population has been investigated using only 45 samples in the HapMap project, which could lead to an inaccurate estimation of the number of SNPs with low minor allele frequencies. We genotyped 400 Japanese samples in order to estimate the number of SNPs available for genome-wide association studies in the Japanese population and to examine the performance of the current SNP Array 6.0 platform and the genotype calling algorithm "Birdseed". Results About 20% of the 909,622 SNP markers on the array were revealed to be monomorphic in the Japanese population. Consequently, 661,599 SNPs were available for genome-wide association studies in the Japanese population, after excluding the poorly behaving SNPs. The Birdseed algorithm accurately determined the genotype calls of each sample with a high overall call rate of over 99.5% and a high concordance rate of over 99.8% using more than 48 samples after removing low-quality samples by adjusting QC criteria. Conclusion Our results confirmed that the SNP Array 6.0 platform reached the level reported by the manufacturer, and thus genome-wide association studies using the SNP Array 6.0 platform have considerable potential to identify candidate susceptibility or resistance genetic factors for multifactorial diseases in the Japanese population, as well as in other populations.

  15. A Hidden Markov Model to estimate population mixture and allelic copy-numbers in cancers using Affymetrix SNP arrays

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    Torring Niels


    Full Text Available Abstract Background Affymetrix SNP arrays can interrogate thousands of SNPs at the same time. This allows us to look at the genomic content of cancer cells and to investigate the underlying events leading to cancer. Genomic copy-numbers are today routinely derived from SNP array data, but the proposed algorithms for this task most often disregard the genotype information available from germline cells in paired germline-tumour samples. Including this information may deepen our understanding of the "true" biological situation e.g. by enabling analysis of allele specific copy-numbers. Here we rely on matched germline-tumour samples and have developed a Hidden Markov Model (HMM to estimate allelic copy-number changes in tumour cells. Further with this approach we are able to estimate the proportion of normal cells in the tumour (mixture proportion. Results We show that our method is able to recover the underlying copy-number changes in simulated data sets with high accuracy (above 97.71%. Moreover, although the known copy-numbers could be well recovered in simulated cancer samples with more than 70% cancer cells (and less than 30% normal cells, we demonstrate that including the mixture proportion in the HMM increases the accuracy of the method. Finally, the method is tested on HapMap samples and on bladder and prostate cancer samples. Conclusion The HMM method developed here uses the genotype calls of germline DNA and the allelic SNP intensities from the tumour DNA to estimate allelic copy-numbers (including changes in the tumour. It differentiates between different events like uniparental disomy and allelic imbalances. Moreover, the HMM can estimate the mixture proportion, and thus inform about the purity of the tumour sample.

  16. Large-scale analysis of antisense transcription in wheat using the Affymetrix GeneChip Wheat Genome Array

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    Settles Matthew L


    Full Text Available Abstract Background Natural antisense transcripts (NATs are transcripts of the opposite DNA strand to the sense-strand either at the same locus (cis-encoded or a different locus (trans-encoded. They can affect gene expression at multiple stages including transcription, RNA processing and transport, and translation. NATs give rise to sense-antisense transcript pairs and the number of these identified has escalated greatly with the availability of DNA sequencing resources and public databases. Traditionally, NATs were identified by the alignment of full-length cDNAs or expressed sequence tags to genome sequences, but an alternative method for large-scale detection of sense-antisense transcript pairs involves the use of microarrays. In this study we developed a novel protocol to assay sense- and antisense-strand transcription on the 55 K Affymetrix GeneChip Wheat Genome Array, which is a 3' in vitro transcription (3'IVT expression array. We selected five different tissue types for assay to enable maximum discovery, and used the 'Chinese Spring' wheat genotype because most of the wheat GeneChip probe sequences were based on its genomic sequence. This study is the first report of using a 3'IVT expression array to discover the expression of natural sense-antisense transcript pairs, and may be considered as proof-of-concept. Results By using alternative target preparation schemes, both the sense- and antisense-strand derived transcripts were labeled and hybridized to the Wheat GeneChip. Quality assurance verified that successful hybridization did occur in the antisense-strand assay. A stringent threshold for positive hybridization was applied, which resulted in the identification of 110 sense-antisense transcript pairs, as well as 80 potentially antisense-specific transcripts. Strand-specific RT-PCR validated the microarray observations, and showed that antisense transcription is likely to be tissue specific. For the annotated sense

  17. Genome-wide loss of heterozygosity and copy number alteration in esophageal squamous cell carcinoma using the Affymetrix GeneChip Mapping 10 K array

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    Goldstein Alisa M


    Full Text Available Abstract Background Esophageal squamous cell carcinoma (ESCC is a common malignancy worldwide. Comprehensive genomic characterization of ESCC will further our understanding of the carcinogenesis process in this disease. Results Genome-wide detection of chromosomal changes was performed using the Affymetrix GeneChip 10 K single nucleotide polymorphism (SNP array, including loss of heterozygosity (LOH and copy number alterations (CNA, for 26 pairs of matched germ-line and micro-dissected tumor DNA samples. LOH regions were identified by two methods – using Affymetrix's genotype call software and using Affymetrix's copy number alteration tool (CNAT software – and both approaches yielded similar results. Non-random LOH regions were found on 10 chromosomal arms (in decreasing order of frequency: 17p, 9p, 9q, 13q, 17q, 4q, 4p, 3p, 15q, and 5q, including 20 novel LOH regions (10 kb to 4.26 Mb. Fifteen CNA-loss regions (200 kb to 4.3 Mb and 36 CNA-gain regions (200 kb to 9.3 Mb were also identified. Conclusion These studies demonstrate that the Affymetrix 10 K SNP chip is a valid platform to integrate analyses of LOH and CNA. The comprehensive knowledge gained from this analysis will enable improved strategies to prevent, diagnose, and treat ESCC.

  18. Comparative Transcriptomic Profiling of Vitis vinifera Under High Light Using a Custom-Made Array and the Affymetrix GeneChip

    Institute of Scientific and Technical Information of China (English)

    Luisa C. Carvalho; Belmiro J. Vilela; Phil M. Mullineaux; Sara Am(a)ncio


    Understanding abiotic stress responses is one of the most important issues in plant research nowadays.Abiotic stress,including excess light,can promote the onset of oxidative stress through the accumulation of reactive oxygen species.Oxidative stress also arises when in vitro propagated plants are exposed to high light upon transfer to ex vitro.To determine whether the underlying pathways activated at the transfer of in vitro grapevine to ex vitro conditions reflect the processes occurring upon light stress,we used Vitis vinifera Affymetrix GeneChip (VvGA) and a custom array of genes responsive to light stress (LSCA) detected by real-time reverse transcriptase PCR (qRT-PCR).When gene-expression profiles were compared,‘protein metabolism and modification',‘signaling',and ‘anti-oxidative' genes were more represented in LSCA,while,in VvGA,‘cell wall metabolism' and ‘secondary metabolism' were the categories in which gene expression varied more significantly.The above functional categories confirm previous studies involving other types of abiotic stresses,enhancing the common attributes of abiotic stress defense pathways.The LSCA analysis of our experimental system detected strong response of heat shock genes,particularly the protein rescuing mechanism involving the cooperation of two ATP-dependent chaperone systems,Hsp100 and Hsp70,which showed an unusually late response during the recovery period,of extreme relevance to remove non-functional,potentially harmful polypeptides arising from misfolding,denaturation,or aggregation brought about by stress.The success of LSCA also proves the feasibility of a custommade qRT-PCR approach,particularly for species for which no GeneChip is available and for researchers dealing with a specific and focused problem.

  19. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat

    NARCIS (Netherlands)

    Alberts, R.; Terpstra, P.; Hardonk, M.; Bystrykh, L.V.; Haan, de G.; Breitling, R.; Nap, J.P.H.; Jansen, R.C.


    Background - The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interpretation. This variation can be caused by probes that do not properly match their target gene or that match multiple gen

  20. A verification protocol for the probe sequences of Affymetrix genome arrays reveals high probe accuracy for studies in mouse, human and rat

    NARCIS (Netherlands)

    Alberts, Rudi; Terpstra, Peter; Hardonk, Menno; Bystrykh, Leonid V.; de Haan, Gerald; Breitling, Rainer; Nap, Jan-Peter; Jansen, Ritsert C.


    Background: The Affymetrix GeneChip technology uses multiple probes per gene to measure its expression level. Individual probe signals can vary widely, which hampers proper interpretation. This variation can be caused by probes that do not properly match their target gene or that match multiple gene

  1. Genome-Wide analysis of allelic imbalance in laser microdissected prostate cancer tissue using the Affymetrix 50K Mapping array identifies genomic patterns associated with metastasis and differentiation

    DEFF Research Database (Denmark)

    Tørring, Niels; Borre, Michael; Sørensen, Karina;


    to be developed for patient stratification based on risk of progression. We analysed laser-microdissected prostate tumour tissue from 43 patients with histologically verified PCa, using the new high-resolution Affymetrix Mapping 50K single-nucleotide polymorphism array. The results showed six major loss......, tumour progression towards a metastatic stage, as well as poor differentiation, was identified by specific patterns of copy number gains of genomic regions located at chromosomes 8q, 1q, 3q and 7q. Androgen ablation therapy was further characterised by copy gain at chromosomes 2p and 10q. In conclusion...

  2. Octave Bandwidth Orthomode Transducers for the Expanded Very Large Array (United States)

    Coutts, Gordon M.


    Quadruple-ridge orthomode transducers (OMTs) have been designed to operate over a full octave bandwidth for the expanded very large array (EVLA) project. The OMT separates linearly polarized signal components by matching a circular waveguide input to two orthogonal coaxial outputs. The OMT is used in conjunction with a quadrature hybrid to detect circularly polarized signal components. This paper focuses on the 1 GHz-2 GHz L-Band OMT design, which has better than 18.8 dB measured return loss across the band, with no evidence of trapped-mode resonances. The OMT is designed with an emphasis on performance, ease of tuning and manufacturability since a large number of units are needed for the array application. Extensive parametric analyses were carried out, and nominal dimensions have been set to ensure the devices exceed RF specifications provided the parts are machined to within specified tolerances. With excellent wideband performance and a simplified manufacturing process, the proposed OMT would be amenable to much larger future array projects.

  3. Alternative mapping of probes to genes for Affymetrix chips

    DEFF Research Database (Denmark)

    Gautier, Laurent; Møller, M.; Friis-Hansen, L.


    by the manufacturer of the chips. For the remaining cases there were discrepancies and we show how that can affect the analysis of data. Conclusions: While the probes on Affymetrix arrays remain the same for several years, the biological knowledge concerning the genomic sequences evolves rapidly. Using up-to-date...

  4. Alternative mapping of probes to genes for Affymetrix chips

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    Friis-Hansen Lennart


    Full Text Available Abstract Background Short oligonucleotide arrays have several probes measuring the expression level of each target transcript. Therefore the selection of probes is a key component for the quality of measurements. However, once probes have been selected and synthesized on an array, it is still possible to re-evaluate the results using an updated mapping of probes to genes, taking into account the latest biological knowledge available. Methods We investigated how probes found on recent commercial microarrays for human genes (Affymetrix HG-U133A were matching a recent curated collection of human transcripts: the NCBI RefSeq database. We also built mappings and used them in place of the original probe to genes associations provided by the manufacturer of the arrays. Results In a large number of cases, 36%, the probes matching a reference sequence were consistent with the grouping of probes by the manufacturer of the chips. For the remaining cases there were discrepancies and we show how that can affect the analysis of data. Conclusions While the probes on Affymetrix arrays remain the same for several years, the biological knowledge concerning the genomic sequences evolves rapidly. Using up-to-date knowledge can apparently change the outcome of an analysis.

  5. affy - analysis of Affymetrix GeneChip data at the probe level

    DEFF Research Database (Denmark)

    Gautier, Laurent; Cope, L.; Bolstad, B.N.;


    The processing of the Affymetrix GeneChip data has been a recent focus for data analysts. Alternatives to the original procedure have been proposed and some of these new methods are widely used. Results: The affy package is an R package of functions and classes for the analysis of oligonucleotide...... arrays manufactured by Affymetrix. The package is currently in its second release, affy provides the user with extreme flexibility when carrying out an analysis and make it possible to access and manipulate probe intensity data. In this paper, we present the main classes and functions in the package...

  6. Comparison of target labeling methods for use with Affymetrix GeneChips

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    Vernon Suzanne D


    Full Text Available Abstract Background Several different commercial one-cycle labeling kits are available for preparation of the target for use with the Affymetrix GeneChip platform. However, there have been no evaluations of these different kits to determine if comparable results were generated. We report on the cRNA target synthesis, labeling efficiency and hybridization results using the One-Cycle Target Labeling Assay™ (Affymetrix, the BioArray RNA Amplification and Labeling System™ (Enzo Life Sciences, and the Superscript RNA Amplification System (Invitrogen Life Technologies. Results The only notable difference between kits was in the yield of cRNA target synthesized during in vitro transcription, where the BioArray assay had to be repeated several times in order to have sufficient target. However, each kit resulted in comparable signal and detection calls when hybridized to the Affymetrix GeneChip. Conclusion These 3 one-cycle labeling kits produce comparable hybridization results. This provides users with several kit options and flexibility when using the Affymetrix system.

  7. Expanded all-optical programmable logic array based on multi-input/output canonical logic units. (United States)

    Lei, Lei; Dong, Jianji; Zou, Bingrong; Wu, Zhao; Dong, Wenchan; Zhang, Xinliang


    We present an expanded all-optical programmable logic array (O-PLA) using multi-input and multi-output canonical logic units (CLUs) generation. Based on four-wave mixing (FWM) in highly nonlinear fiber (HNLF), two-input and three-input CLUs are simultaneously achieved in five different channels with an operation speed of 40 Gb/s. Clear temporal waveforms and wide open eye diagrams are successfully observed. The effectiveness of the scheme is validated by extinction ratio and optical signal-to-noise ratio measurements. The computing capacity, defined as the total amount of logic functions achieved by the O-PLA, is discussed in detail. For a three-input O-PLA, the computing capacity of the expanded CLUs-PLA is more than two times as large as that of the standard CLUs-PLA, and this multiple will increase to more than three and a half as the idlers are individually independent.

  8. Modelling background intensity in Affymetrix Genechips

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    Kroll, K M; Carlon, E


    DNA microarrays are devices that are able, in principle, to detect and quantify the presence of specific nucleic acid sequences in complex biological mixtures. The measurement consists in detecting fluorescence signals from several spots on the microarray surface onto which different probe sequences are grafted. One of the problems of the data analysis is that the signal contains a noisy background component due to non-specific binding. This paper presents a physical model for background estimation in Affymetrix Genechips. It combines two different approaches. The first is based on the sequence composition, specifically its sequence dependent hybridization affinity. The second is based on the strong correlation of intensities from locations which are the physical neighbors of a specific spot on the chip. Both effects are incorporated in a background functional which contains 24 free parameters, fixed by minimization on a training data set. In all data analyzed the sequence specific parameters, obtained by min...

  9. Micro-Analyzer: automatic preprocessing of Affymetrix microarray data. (United States)

    Guzzi, Pietro Hiram; Cannataro, Mario


    A current trend in genomics is the investigation of the cell mechanism using different technologies, in order to explain the relationship among genes, molecular processes and diseases. For instance, the combined use of gene-expression arrays and genomic arrays has been demonstrated as an effective instrument in clinical practice. Consequently, in a single experiment different kind of microarrays may be used, resulting in the production of different types of binary data (images and textual raw data). The analysis of microarray data requires an initial preprocessing phase, that makes raw data suitable for use on existing analysis platforms, such as the TIGR M4 (TM4) Suite. An additional challenge to be faced by emerging data analysis platforms is the ability to treat in a combined way those different microarray formats coupled with clinical data. In fact, resulting integrated data may include both numerical and symbolic data (e.g. gene expression and SNPs regarding molecular data), as well as temporal data (e.g. the response to a drug, time to progression and survival rate), regarding clinical data. Raw data preprocessing is a crucial step in analysis but is often performed in a manual and error prone way using different software tools. Thus novel, platform independent, and possibly open source tools enabling the semi-automatic preprocessing and annotation of different microarray data are needed. The paper presents Micro-Analyzer (Microarray Analyzer), a cross-platform tool for the automatic normalization, summarization and annotation of Affymetrix gene expression and SNP binary data. It represents the evolution of the μ-CS tool, extending the preprocessing to SNP arrays that were not allowed in μ-CS. The Micro-Analyzer is provided as a Java standalone tool and enables users to read, preprocess and analyse binary microarray data (gene expression and SNPs) by invoking TM4 platform. It avoids: (i) the manual invocation of external tools (e.g. the Affymetrix Power

  10. The Expanded Very Large Array: A Radio Telescope for the 21st Century (United States)


    The world's most productive and widely-used radio telescope, the National Science Foundation's Very Large Array (VLA), can be improved tenfold with an expansion project proposed by the National Radio Astronomy Observatory (NRAO). "This project will ensure that the scientific community has a state-of-the-art research tool to meet the astronomical research challenges of the 21st Century," said Paul Vanden Bout, NRAO Director. Aerial View of the VLA Plans for the Expanded VLA (EVLA) and its potential for new scientific contributions were described today in a series of presentations at the American Astronomical Society's meeting in Rochester, NY. The EVLA project plans to replace dated equipment left over from the VLA's original construction in the 1970s and add eight new radio- telescope dish antennas to the current, 27-dish system. It received a strong endorsement last month when the Astronomy and Astrophysics Survey Committee of the National Academy of Sciences gave the project one of its highest ratings as a priority for the next decade in its report entitled "Astronomy and Astrophysics in the New Millennium." "The Survey Committee's endorsement shows that the astronomical research community strongly supports the Expanded VLA," said NRAO astronomer Jim Ulvestad, who spoke to reporters at the AAS meeting. "The VLA has long been a unique and critical resource for all of astronomy, and we look forward to turning it into a dramatic, new research tool." The VLA Expansion Project will use modern electronics and computer technology to greatly improve the VLA's ability to observe faint celestial objects and to analyze their radio emissions. A set of eight new dish antennas, added to the current 27-antenna system, will allow the VLA to produce images with ten times greater detail. The project will build on the VLA's current infrastructure, including its 230-ton dish antennas, the railroad tracks for moving those antennas, and the existing buildings and access roads. The

  11. AMiBA: Cluster Sunyaev-Zel'dovich Effect Observations with the Expanded 13-Element Array

    CERN Document Server

    Lin, Kai-Yang; Wang, Fu-Cheng; Huang, Chih-Wei Locutus; Liao, Yu-Wei; Wu, Jiun-Huei Proty; Koch, Patrick M; Umetsu, Keiichi; Chen, Ming-Tang; Chan, Shun-Hsiang; Chang, Shu-Hao; Chang, Wen-Hsuan Lucky; Cheng, Tai-An; Duy, Hoang Ngoc; Fu, Szu-Yuan; Han, Chih-Chiang; Ho, Solomon; Ho, Ming-Feng; Ho, Paul T P; Huang, Yau-De; Jiang, Homin; Kubo, Derek Y; Li, Chao-Te; Lin, Yu-Chiung; Liu, Guo-Chin; Martin-Cocher, Pierre; Molnar, Sandor M; Nunez, Emmanuel; Oshiro, Peter; Pai, Shang-Ping; Raffin, Philippe; Ridenour, Anthony; Shih, Chia-You; Stoebner, Sara; Teo, Giap-Siong; Yeh, Jia-Long Johnny; Williams, Joshua; Birkinshaw, Mark


    The Yuan-Tseh Lee Array for Microwave Background Anisotropy (AMiBA) is a co-planar interferometer array operating at a wavelength of 3mm to measure the Sunyaev-Zeldovich effect (SZE) of galaxy clusters. In the first phase of operation -- with a compact 7-element array with 0.6m antennas (AMiBA-7) -- we observed six clusters at angular scales from 5\\arcmin to 23\\arcmin. Here, we describe the expansion of AMiBA to a 13-element array with 1.2m antennas (AMiBA-13), its subsequent commissioning, and our cluster SZE observing program. The most important changes compared to AMiBA-7 are (1) array re-configuration with baselines ranging from 1.4m to 4.8m covering angular scales from 2\\arcmin to 11.5\\arcmin, (2) thirteen new lightweight carbon-fiber-reinforced plastic (CFRP) 1.2m reflectors, and (3) additional correlators and six new receivers. From the AMiBA-13 SZE observing program, we present here maps of a subset of twelve clusters. In highlights, we combine AMiBA-7 and AMiBA-13 observations of Abell 1689 and perfo...

  12. Direct integration of intensity-level data from Affymetrix and Illumina microarrays improves statistical power for robust reanalysis

    Directory of Open Access Journals (Sweden)

    Turnbull Arran K


    Full Text Available Abstract Background Affymetrix GeneChips and Illumina BeadArrays are the most widely used commercial single channel gene expression microarrays. Public data repositories are an extremely valuable resource, providing array-derived gene expression measurements from many thousands of experiments. Unfortunately many of these studies are underpowered and it is desirable to improve power by combining data from more than one study; we sought to determine whether platform-specific bias precludes direct integration of probe intensity signals for combined reanalysis. Results Using Affymetrix and Illumina data from the microarray quality control project, from our own clinical samples, and from additional publicly available datasets we evaluated several approaches to directly integrate intensity level expression data from the two platforms. After mapping probe sequences to Ensembl genes we demonstrate that, ComBat and cross platform normalisation (XPN, significantly outperform mean-centering and distance-weighted discrimination (DWD in terms of minimising inter-platform variance. In particular we observed that DWD, a popular method used in a number of previous studies, removed systematic bias at the expense of genuine biological variability, potentially reducing legitimate biological differences from integrated datasets. Conclusion Normalised and batch-corrected intensity-level data from Affymetrix and Illumina microarrays can be directly combined to generate biologically meaningful results with improved statistical power for robust, integrated reanalysis.

  13. AMiBA: Cluster Sunyaev-Zel’dovich Effect Observations with the Expanded 13-element Array (United States)

    Lin, Kai-Yang; Nishioka, Hiroaki; Wang, Fu-Cheng; Locutus Huang, Chih-Wei; Liao, Yu-Wei; Proty Wu, Jiun-Huei; Koch, Patrick M.; Umetsu, Keiichi; Chen, Ming-Tang; Chan, Shun-Hsiang; Chang, Shu-Hao; Lucky Chang, Wen-Hsuan; Cheng, Tai-An; Duy, Hoang Ngoc; Fu, Szu-Yuan; Han, Chih-Chiang; Ho, Solomon; Ho, Ming-Feng; Ho, Paul T. P.; Huang, Yau-De; Jiang, Homin; Kubo, Derek Y.; Li, Chao-Te; Lin, Yu-Chiung; Liu, Guo-Chin; Martin-Cocher, Pierre; Molnar, Sandor M.; Nunez, Emmanuel; Oshiro, Peter; Pai, Shang-Ping; Raffin, Philippe; Ridenour, Anthony; Shih, Chia-You; Stoebner, Sara; Teo, Giap-Siong; Yeh, Jia-Long Johnny; Williams, Joshua; Birkinshaw, Mark


    The Yuan-Tseh Lee Array for Microwave Background Anisotropy (AMiBA) is a co-planar interferometer array operating at a wavelength of 3 mm to measure the Sunyaev-Zel’dovich effect (SZE) of galaxy clusters at arcminute scales. The first phase of operation—with a compact 7-element array with 0.6 m antennas (AMiBA-7)—observed six clusters at angular scales from 5\\prime to 23\\prime . Here, we describe the expansion of AMiBA to a 13-element array with 1.2 m antennas (AMiBA-13), its subsequent commissioning, and cluster SZE observing program. The most noticeable changes compared to AMiBA-7 are (1) array re-configuration with baselines ranging from 1.4 m to 4.8 m, allowing us to sample structures between 2\\prime and 10\\prime , (2) 13 new lightweight carbon-fiber-reinforced plastic (CFRP) 1.2 m reflectors, and (3) additional correlators and six new receivers. Since the reflectors are co-mounted on and distributed over the entire six-meter CFRP platform, a refined hexapod pointing error model and phase error correction scheme have been developed for AMiBA-13. These effects—entirely negligible for the earlier central close-packed AMiBA-7 configuration—can lead to additional geometrical delays during observations. Our correction scheme recovers at least 80 ± 5% of the point-source fluxes. We, therefore, apply an upward correcting factor of 1.25 to our visibilities to correct for phase decoherence, and a ±5% systematic uncertainty is added in quadrature with our statistical errors. We demonstrate the absence of further systematics with a noise level consistent with zero in stacked uv-visibilities. From the AMiBA-13 SZE observing program, we present here maps of a subset of 12 clusters with signal-to-noise ratios above five. We demonstrate combining AMiBA-7 with AMiBA-13 observations on Abell 1689, by jointly fitting their data to a generalized Navarro-Frenk-White model. Our cylindrically integrated Compton-y values for five radii are consistent with results from

  14. Axiom turkey genotyping array (United States)

    The Axiom®Turkey Genotyping Array interrogates 643,845 probesets on the array, covering 643,845 SNPs. The array development was led by Dr. Julie Long of the USDA-ARS Beltsville Agricultural Research Center under a public-private partnership with Hendrix Genetics, Aviagen, and Affymetrix. The Turk...

  15. ‘maskBAD’ – a package to detect and remove Affymetrix probes with binding affinity differences

    Directory of Open Access Journals (Sweden)

    Dannemann Michael


    Full Text Available Abstract Background Hybridization differences caused by target sequence differences can be a confounding factor in analyzing gene expression on microarrays, lead to false positives and reduce power to detect real expression differences. We prepared an R Bioconductor compatible package to detect, characterize and remove such probes in Affymetrix 3’IVT and exon-based arrays on the basis of correlation of signal intensities from probes within probe sets. Results Using completely mouse genomes we determined type 1 (false negatives and type 2 (false positives errors with high accuracy and we show that our method routinely outperforms previous methods. When detecting 76.2% of known SNP/indels in mouse expression data, we obtain at most 5.5% false positives. At the same level of false positives, best previous method detected 72.6%. We also show that probes with differing binding affinity both hinder differential expression detection and introduce artifacts in cancer-healthy tissue comparison. Conclusions Detection and removal of such probes should be a routine step in Affymetrix data preprocessing. We prepared a user friendly R package, compatible with Bioconductor, that allows the filtering and improving of data from Affymetrix microarrays experiments.

  16. Utility of the pooling approach as applied to whole genome association scans with high-density Affymetrix microarrays

    Directory of Open Access Journals (Sweden)

    Gray Joanna


    Full Text Available Abstract Background We report an attempt to extend the previously successful approach of combining SNP (single nucleotide polymorphism microarrays and DNA pooling (SNP-MaP employing high-density microarrays. Whereas earlier studies employed a range of Affymetrix SNP microarrays comprising from 10 K to 500 K SNPs, this most recent investigation used the 6.0 chip which displays 906,600 SNP probes and 946,000 probes for the interrogation of CNVs (copy number variations. The genotyping assay using the Affymetrix SNP 6.0 array is highly demanding on sample quality due to the small feature size, low redundancy, and lack of mismatch probes. Findings In the first study published so far using this microarray on pooled DNA, we found that pooled cheek swab DNA could not accurately predict real allele frequencies of the samples that comprised the pools. In contrast, the allele frequency estimates using blood DNA pools were reasonable, although inferior compared to those obtained with previously employed Affymetrix microarrays. However, it might be possible to improve performance by developing improved analysis methods. Conclusions Despite the decreasing costs of genome-wide individual genotyping, the pooling approach may have applications in very large-scale case-control association studies. In such cases, our study suggests that high-quality DNA preparations and lower density platforms should be preferred.

  17. affyPara-a Bioconductor Package for Parallelized Preprocessing Algorithms of Affymetrix Microarray Data. (United States)

    Schmidberger, Markus; Vicedo, Esmeralda; Mansmann, Ulrich


    Microarray data repositories as well as large clinical applications of gene expression allow to analyse several hundreds of microarrays at one time. The preprocessing of large amounts of microarrays is still a challenge. The algorithms are limited by the available computer hardware. For example, building classification or prognostic rules from large microarray sets will be very time consuming. Here, preprocessing has to be a part of the cross-validation and resampling strategy which is necessary to estimate the rule's prediction quality honestly.This paper proposes the new Bioconductor package affyPara for parallelized preprocessing of Affymetrix microarray data. Partition of data can be applied on arrays and parallelization of algorithms is a straightforward consequence. The partition of data and distribution to several nodes solves the main memory problems and accelerates preprocessing by up to the factor 20 for 200 or more arrays.affyPara is a free and open source package, under GPL license, available form the Bioconductor project at A user guide and examples are provided with the package.

  18. Statistical evaluation of transcriptomic data generated using the Affymetrix one-cycle, two-cycle and IVT-Express RNA labelling protocols with the Arabidopsis ATH1 microarray

    Directory of Open Access Journals (Sweden)

    Hodgman T


    Full Text Available Abstract Background Microarrays are a powerful tool used for the determination of global RNA expression. There is an increasing requirement to focus on profiling gene expression in tissues where it is difficult to obtain large quantities of material, for example individual tissues within organs such as the root, or individual isolated cells. From such samples, it is difficult to produce the amount of RNA required for labelling and hybridisation in microarray experiments, thus a process of amplification is usually adopted. Despite the increasing use of two-cycle amplification for transcriptomic analyses on the Affymetrix ATH1 array, there has been no report investigating any potential bias in gene representation that may occur as a result. Results Here we compare transcriptomic data generated using Affymetrix one-cycle (standard labelling protocol, two-cycle (small-sample protocol and IVT-Express protocols with the Affymetrix ATH1 array using Arabidopsis root samples. Results obtained with each protocol are broadly similar. However, we show that there are 35 probe sets (of a total of 22810 that are misrepresented in the two-cycle data sets. Of these, 33 probe sets were classed as mis-amplified when comparisons of two independent publicly available data sets were undertaken. Conclusions Given the unreliable nature of the highlighted probes, we caution against using data associated with the corresponding genes in analyses involving transcriptomic data generated with two-cycle amplification protocols. We have shown that the Affymetrix IVT-E labelling protocol produces data with less associated bias than the two-cycle protocol, and as such, would recommend this kit for new experiments that involve small samples.

  19. Methods comparison for high-resolution transcriptional analysis of archival material on Affymetrix Plus 2.0 and Exon 1.0 microarrays. (United States)

    Linton, Kim; Hey, Yvonne; Dibben, Sian; Miller, Crispin; Freemont, Anthony; Radford, John; Pepper, Stuart


    Microarray gene expression profiling of formalin-fixed paraffin-embedded (FFPE) tissues is a new and evolving technique. This report compares transcript detection rates on Affymetrix U133 Plus 2.0 and Human Exon 1.0 ST GeneChips across several RNA extraction and target labeling protocols, using routinely collected archival FFPE samples. All RNA extraction protocols tested (Ambion-Optimum, Ambion-RecoverAll, and Qiagen-RNeasy FFPE) provided extracts suitable for microarray hybridization. Compared with Affymetrix One-Cycle labeled extracts, NuGEN system protocols utilizing oligo(dT) and random hexamer primers, and cDNA target preparations instead of cRNA, achieved percent present rates up to 55% on Plus 2.0 arrays. Based on two paired-sample analyses, at 90% specificity this equalled an average 30 percentage-point increase (from 50% to 80%) in FFPE transcript sensitivity relative to fresh frozen tissues, which we have assumed to have 100% sensitivity and specificity. The high content of Exon arrays, with multiple probe sets per exon, improved FFPE sensitivity to 92% at 96% specificity, corresponding to an absolute increase of ~600 genes over Plus 2.0 arrays. While larger series are needed to confirm high correspondence between fresh-frozen and FFPE expression patterns, these data suggest that both Plus 2.0 and Exon arrays are suitable platforms for FFPE microarray expression analyses.

  20. Mapping gene clusters within arrayed metagenomic libraries to expand the structural diversity of biomedically relevant natural products. (United States)

    Owen, Jeremy G; Reddy, Boojala Vijay B; Ternei, Melinda A; Charlop-Powers, Zachary; Calle, Paula Y; Kim, Jeffrey H; Brady, Sean F


    Complex microbial ecosystems contain large reservoirs of unexplored biosynthetic diversity. Here we provide an experimental framework and data analysis tool to facilitate the targeted discovery of natural-product biosynthetic gene clusters from the environment. Multiplex sequencing of barcoded PCR amplicons is followed by sequence similarity directed data parsing to identify sequences bearing close resemblance to biosynthetically or biomedically interesting gene clusters. Amplicons are then mapped onto arrayed metagenomic libraries to guide the recovery of targeted gene clusters. When applied to adenylation- and ketosynthase-domain amplicons derived from saturating soil DNA libraries, our analysis pipeline led to the recovery of biosynthetic clusters predicted to encode for previously uncharacterized glycopeptide- and lipopeptide-like antibiotics; thiocoraline-, azinomycin-, and bleomycin-like antitumor agents; and a rapamycin-like immunosuppressant. The utility of the approach is demonstrated by using recovered eDNA sequences to generate glycopeptide derivatives. The experiments described here constitute a systematic interrogation of a soil metagenome for gene clusters capable of encoding naturally occurring derivatives of biomedically relevant natural products. Our results show that previously undetected biosynthetic gene clusters with potential biomedical relevance are very common in the environment. This general process should permit the routine screening of environmental samples for gene clusters capable of encoding the systematic expansion of the structural diversity seen in biomedically relevant families of natural products.

  1. Comparison of seven methods for producing Affymetrix expression scores based on False Discovery Rates in disease profiling data

    Directory of Open Access Journals (Sweden)

    Gruber Stephen B


    Full Text Available Abstract Background A critical step in processing oligonucleotide microarray data is combining the information in multiple probes to produce a single number that best captures the expression level of a RNA transcript. Several systematic studies comparing multiple methods for array processing have used tightly controlled calibration data sets as the basis for comparison. Here we compare performances for seven processing methods using two data sets originally collected for disease profiling studies. An emphasis is placed on understanding sensitivity for detecting differentially expressed genes in terms of two key statistical determinants: test statistic variability for non-differentially expressed genes, and test statistic size for truly differentially expressed genes. Results In the two data sets considered here, up to seven-fold variation across the processing methods was found in the number of genes detected at a given false discovery rate (FDR. The best performing methods called up to 90% of the same genes differentially expressed, had less variable test statistics under randomization, and had a greater number of large test statistics in the experimental data. Poor performance of one method was directly tied to a tendency to produce highly variable test statistic values under randomization. Based on an overall measure of performance, two of the seven methods (Dchip and a trimmed mean approach are superior in the two data sets considered here. Two other methods (MAS5 and GCRMA-EB are inferior, while results for the other three methods are mixed. Conclusions Choice of processing method has a major impact on differential expression analysis of microarray data. Previously reported performance analyses using tightly controlled calibration data sets are not highly consistent with results reported here using data from human tissue samples. Performance of array processing methods in disease profiling and other realistic biological studies should be

  2. Coverage and characteristics of the Affymetrix GeneChip Human Mapping 100K SNP set.

    Directory of Open Access Journals (Sweden)


    Full Text Available Improvements in technology have made it possible to conduct genome-wide association mapping at costs within reach of academic investigators, and experiments are currently being conducted with a variety of high-throughput platforms. To provide an appropriate context for interpreting results of such studies, we summarize here results of an investigation of one of the first of these technologies to be publicly available, the Affymetrix GeneChip Human Mapping 100K set of single nucleotide polymorphisms (SNPs. In a systematic analysis of the pattern and distribution of SNPs in the Mapping 100K set, we find that SNPs in this set are undersampled from coding regions (both nonsynonymous and synonymous and oversampled from regions outside genes, relative to SNPs in the overall HapMap database. In addition, we utilize a novel multilocus linkage disequilibrium (LD coefficient based on information content (analogous to the information content scores commonly used for linkage mapping that is equivalent to the familiar measure r2 in the special case of two loci. Using this approach, we are able to summarize for any subset of markers, such as the Affymetrix Mapping 100K set, the information available for association mapping in that subset, relative to the information available in the full set of markers included in the HapMap, and highlight circumstances in which this multilocus measure of LD provides substantial additional insight about the haplotype structure in a region over pairwise measures of LD.

  3. Validation of pooled genotyping on the Affymetrix 500 k and SNP6.0 genotyping platforms using the polynomial-based probe-specific correction

    Directory of Open Access Journals (Sweden)

    Chew Fook Tim


    Full Text Available Abstract Background The use of pooled DNA on SNP microarrays (SNP-MaP has been shown to be a cost effective and rapid manner to perform whole-genome association evaluations. While the accuracy of SNP-MaP was extensively evaluated on the early Affymetrix 10 k and 100 k platforms, there have not been as many similarly comprehensive studies on more recent platforms. In the present study, we used the data generated from the full Affymetrix 500 k SNP set together with the polynomial-based probe-specific correction (PPC to derive allele frequency estimates. These estimates were compared to genotyping results of the same individuals on the same platform, as the basis to evaluate the reliability and accuracy of pooled genotyping on these high-throughput platforms. We subsequently extended this comparison to the new SNP6.0 platform capable of genotyping 1.8 million genetic variants. Results We showed that pooled genotyping on the 500 k platform performed as well as those previously shown on the relatively lower throughput 10 k and 100 k array sets, with high levels of accuracy (correlation coefficient: 0.988 and low median error (0.036 in allele frequency estimates. Similar results were also obtained from the SNP6.0 array set. A novel pooling strategy of overlapping sub-pools was attempted and comparison of estimated allele frequencies showed this strategy to be as reliable as replicate pools. The importance of an appropriate reference genotyping data set for the application of the PPC algorithm was also evaluated; reference samples with similar ethnic background to the pooled samples were found to improve estimation of allele frequencies. Conclusion We conclude that use of the PPC algorithm to estimate allele frequencies obtained from pooled genotyping on the high throughput 500 k and SNP6.0 platforms is highly accurate and reproducible especially when a suitable reference sample set is used to estimate the beta values for PPC.

  4. The Affymetrix DMET Plus Platform Reveals Unique Distribution of ADME-Related Variants in Ethnic Arabs

    Directory of Open Access Journals (Sweden)

    Salma M. Wakil


    Full Text Available Background. The Affymetrix Drug Metabolizing Enzymes and Transporters (DMET Plus Premier Pack has been designed to genotype 1936 gene variants thought to be essential for screening patients in personalized drug therapy. These variants include the cytochrome P450s (CYP450s, the key metabolizing enzymes, many other enzymes involved in phase I and phase II pharmacokinetic reactions, and signaling mediators associated with variability in clinical response to numerous drugs not only among individuals, but also between ethnic populations. Materials and Methods. We genotyped 600 Saudi individuals for 1936 variants on the DMET platform to evaluate their clinical potential in personalized medicine in ethnic Arabs. Results. Approximately 49% each of the 437 CYP450 variants, 56% of the 581 transporters, 56% of 419 transferases, 48% of the 104 dehydrogenases, and 58% of the remaining 390 variants were detected. Several variants, such as rs3740071, rs6193, rs258751, rs6199, rs11568421, and rs8187797, exhibited significantly either higher or lower minor allele frequencies (MAFs than those in other ethnic groups. Discussion. The present study revealed some unique distribution trends for several variants in Arabs, which displayed partly inverse allelic prevalence compared to other ethnic populations. The results point therefore to the need to verify and ascertain the prevalence of a variant as a prerequisite for engaging it in clinical routine screening in personalized medicine in any given population.

  5. Expanding earth

    Energy Technology Data Exchange (ETDEWEB)

    Carey, S.W.


    Arguments in favor of an expanding earth are presented. The author believes that the theory of plate tectonics is a classic error in the history of geology. The case for the expanding earth is organized in the following way: introductory review - face of the earth, development of expanding earth concept, necessity for expansion, the subduction myth, and definitions; some principles - scale of tectonic phenomena, non-uniformitarianism, tectonic profile, paleomagnetism, asymmetry of the earth, rotation of the earth, and modes of crustal extension; regional studies - western North America, Central America, South-East Asia, and the rift oceans; tests and cause of expansion. 824 references, 197 figures, 11 tables. (RWR)

  6. Expandable Fully Compliant Capacitive Tactile Sensing Array:Design and Experiment%可拼接式全柔性电容触觉阵列传感器设计与实验

    Institute of Scientific and Technical Information of China (English)

    黄英; 郭小辉; 刘家俊; 马阳洋; 刘彩霞; 刘平; 田合雷


    针对现有机器人触觉传感器存在可穿戴性与可移植性差、不易维护及扩展等缺点,提出了一种可用于机器人仿生皮肤的全柔性电容式触觉传感器,并设计成12×12正方形触觉传感阵列和正六边形触觉模块两种可拼接式阵列结构。以炭黑填充硅橡胶作为电容式触觉传感器的弹性电介质,聚酰亚胺为柔性基体,有机硅导电银胶和金属膜为上下两柔性极板,共同构成压力敏感单元。介绍了电容式柔性触觉传感器的工作原理、结构设计及两种与之对应的电容触觉阵列无线数据采集与处理系统。实验结果表明,该全柔性电容式触觉阵列传感器及信号提取系统具有良好的稳定性与灵敏度,可用作人工皮肤实现全触觉感知。%Current robot tactile sensors have shortcomings such as poor wearability and portability, as well as being unpleasant to be maintained and expanded. An expandable, fully compliant capacitive tactile sensor is presented to counteract these shortcomings, which can be used as bio-inspired skin. The structure is designed with two kinds of expandable arrays, the 12×12 square tactile sensing array and the hexagon tactile model. The pressure-sensitive unit is constituted of carbon black filled silicone rubber uniformly as the elastic dielectric of the capacitive sensor, polyimide film as the flexible substrate, as well as silver conductive adhesive and metal film as the flexible parallel-plates of capacitor. In addition, the working principle and the structure design of the capacitive flexible tactile sensor are introduced, and also the wireless signal acquisition and processing systems of two corresponding capacitive arrays are proposed. The experiment results indicate that the fully compliant capacitive sensing array and capacitive signal extraction system has good stability and sensitivity to be used as artificial skin to achieve tactile perception.

  7. Assessment of the relationship between pre-chip and post-chip quality measures for Affymetrix GeneChip expression data

    Directory of Open Access Journals (Sweden)

    Augood Sarah J


    Full Text Available Abstract Background Gene expression microarray experiments are expensive to conduct and guidelines for acceptable quality control at intermediate steps before and after the samples are hybridised to chips are vague. We conducted an experiment hybridising RNA from human brain to 117 U133A Affymetrix GeneChips and used these data to explore the relationship between 4 pre-chip variables and 22 post-chip outcomes and quality control measures. Results We found that the pre-chip variables were significantly correlated with each other but that this correlation was strongest between measures of RNA quality and cRNA yield. Post-mortem interval was negatively correlated with these variables. Four principal components, reflecting array outliers, array adjustment, hybridisation noise and RNA integrity, explain about 75% of the total post-chip measure variability. Two significant canonical correlations existed between the pre-chip and post-chip variables, derived from MAS 5.0, dChip and the Bioconductor packages affy and affyPLM. The strongest (CANCOR 0.838, p Conclusion We have found that the post-chip variables having the strongest association with quantities measurable before hybridisation are those reflecting RNA integrity. Other aspects of quality, such as noise measures (reflecting the execution of the assay or measures reflecting data quality (outlier status and array adjustment variables are not well predicted by the variables we were able to determine ahead of time. There could be other variables measurable pre-hybridisation which may be better associated with expression data quality measures. Uncovering such connections could create savings on costly microarray experiments by eliminating poor samples before hybridisation.

  8. Expanding the HAWC Observatory

    Energy Technology Data Exchange (ETDEWEB)

    Mori, Johanna [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)


    The High Altitude Water Cherenkov Gamma-Ray Observatory is expanding its current array of 300 water tanks to include 350 outrigger tanks to increase sensitivity to gamma rays above 10 TeV. This involves creating and testing hardware with which to build the new tanks, including photomultiplier tubes, high voltage supply units, and flash analog to digital converters. My responsibilities this summer included preparing, testing and calibrating that equipment.

  9. Expanding subjectivities

    DEFF Research Database (Denmark)

    Lundgaard Andersen, Linda; Soldz, Stephen


    A major theme in recent psychoanalytic thinking concerns the use of therapist subjectivity, especially “countertransference,” in understanding patients. This thinking converges with and expands developments in qualitative research regarding the use of researcher subjectivity as a tool to understa......-Saxon and continental traditions, this special issue provides examples of the use of researcher subjectivity, informed by psychoanalytic thinking, in expanding research understanding....

  10. Oligonucleotide array outperforms SNP array on formalin-fixed paraffin-embedded clinical samples. (United States)

    Nasri, Soroush; Anjomshoaa, Ahmad; Song, Sarah; Guilford, Parry; McNoe, Les; Black, Michael; Phillips, Vicky; Reeve, Anthony; Humar, Bostjan


    Compromised quality of formalin-fixed paraffin-embedded (FFPE)-derived DNA has compounded the use of archival specimens for array-based genomic studies. Recent technological advances have led to first successes in this field; however, there is currently no general agreement on the most suitable platform for the array-based analysis of FFPE DNA. In this study, FFPE and matched fresh-frozen (FF) specimens were separately analyzed with Affymetrix single nucleotide polymorphism (SNP) 6.0 and Agilent 4x44K oligonucleotide arrays to compare the genomic profiles from the two tissue sources and to assess the relative performance of the two platforms on FFPE material. Genomic DNA was extracted from matched FFPE-FF pairs of normal intestinal epithelium from four patients and were applied to the SNP and oligonucleotide platforms according to the manufacturer-recommended protocols. On the Affymetrix platform, a substantial increase in apparent copy number alterations was observed in all FFPE tissues relative to their matched FF counterparts. In contrast, FFPE and matched FF genomic profiles obtained via the Agilent platform were very similar. Both the SNP and the oligonucleotide platform performed comparably on FF material. This study demonstrates that Agilent oligonucleotide array comparative genomic hybridization generates reliable results from FFPE extracted DNA, whereas the Affymetrix SNP-based array seems less suitable for the analysis of FFPE material.

  11. High-quality genotyping data from formalin-fixed, paraffin-embedded tissue on the drug metabolizing enzymes and transporters plus array

    NARCIS (Netherlands)

    Vos, H.I.; Straaten, T. van der; Coenen, M.J.H.; Flucke, U.E.; Loo, D.M.W.M. te; Guchelaar, H.J.


    The Affymetrix Drug Metabolizing Enzymes and Transporters (DMET) Plus array covers 1936 markers in 231 genes involved in drug metabolism and transport. Blood- and saliva-derived DNA works well on the DMET array, but the utility of DNA from FFPE tissue has not been reported for this array. As the abi

  12. High fidelity copy number analysis of formalin-fixed and paraffin-embedded tissues using Affymetrix Cytoscan HD chip.

    Directory of Open Access Journals (Sweden)

    Yan P Yu

    Full Text Available Detection of human genome copy number variation (CNV is one of the most important analyses in diagnosing human malignancies. Genome CNV detection in formalin-fixed and paraffin-embedded (FFPE tissues remains challenging due to suboptimal DNA quality and failure to use appropriate baseline controls for such tissues. Here, we report a modified method in analyzing CNV in FFPE tissues using microarray with Affymetrix Cytoscan HD chips. Gel purification was applied to select DNA with good quality and data of fresh frozen and FFPE tissues from healthy individuals were included as baseline controls in our data analysis. Our analysis showed a 91% overlap between CNV detection by microarray with FFPE tissues and chromosomal abnormality detection by karyotyping with fresh tissues on 8 cases of lymphoma samples. The CNV overlap between matched frozen and FFPE tissues reached 93.8%. When the analyses were restricted to regions containing genes, 87.1% concordance between FFPE and fresh frozen tissues was found. The analysis was further validated by Fluorescence In Situ Hybridization on these samples using probes specific for BRAF and CITED2. The results suggested that the modified method using Affymetrix Cytoscan HD chip gave rise to a significant improvement over most of the previous methods in terms of accuracy in detecting CNV in FFPE tissues. This FFPE microarray methodology may hold promise for broad application of CNV analysis on clinical samples.

  13. A new method for class prediction based on signed-rank algorithms applied to Affymetrix® microarray experiments

    Directory of Open Access Journals (Sweden)

    Vassal Aurélien


    Full Text Available Abstract Background The huge amount of data generated by DNA chips is a powerful basis to classify various pathologies. However, constant evolution of microarray technology makes it difficult to mix data from different chip types for class prediction of limited sample populations. Affymetrix® technology provides both a quantitative fluorescence signal and a decision (detection call: absent or present based on signed-rank algorithms applied to several hybridization repeats of each gene, with a per-chip normalization. We developed a new prediction method for class belonging based on the detection call only from recent Affymetrix chip type. Biological data were obtained by hybridization on U133A, U133B and U133Plus 2.0 microarrays of purified normal B cells and cells from three independent groups of multiple myeloma (MM patients. Results After a call-based data reduction step to filter out non class-discriminative probe sets, the gene list obtained was reduced to a predictor with correction for multiple testing by iterative deletion of probe sets that sequentially improve inter-class comparisons and their significance. The error rate of the method was determined using leave-one-out and 5-fold cross-validation. It was successfully applied to (i determine a sex predictor with the normal donor group classifying gender with no error in all patient groups except for male MM samples with a Y chromosome deletion, (ii predict the immunoglobulin light and heavy chains expressed by the malignant myeloma clones of the validation group and (iii predict sex, light and heavy chain nature for every new patient. Finally, this method was shown powerful when compared to the popular classification method Prediction Analysis of Microarray (PAM. Conclusion This normalization-free method is routinely used for quality control and correction of collection errors in patient reports to clinicians. It can be easily extended to multiple class prediction suitable with

  14. inSilicoDb: an R/Bioconductor package for accessing human Affymetrix expert-curated datasets from GEO. (United States)

    Taminau, Jonatan; Steenhoff, David; Coletta, Alain; Meganck, Stijn; Lazar, Cosmin; de Schaetzen, Virginie; Duque, Robin; Molter, Colin; Bersini, Hugues; Nowé, Ann; Weiss Solís, David Y


    Microarray technology has become an integral part of biomedical research and increasing amounts of datasets become available through public repositories. However, re-use of these datasets is severely hindered by unstructured, missing or incorrect biological samples information; as well as the wide variety of preprocessing methods in use. The inSilicoDb R/Bioconductor package is a command-line front-end to the InSilico DB, a web-based database currently containing 86 104 expert-curated human Affymetrix expression profiles compiled from 1937 GEO repository series. The use of this package builds on the Bioconductor project's focus on reproducibility by enabling a clear workflow in which not only analysis, but also the retrieval of verified data is supported.

  15. The gene expression data of Mycobacterium tuberculosis based on Affymetrix gene chips provide insight into regulatory and hypothetical genes

    Directory of Open Access Journals (Sweden)

    Fu-Liu Casey S


    Full Text Available Abstract Background Tuberculosis remains a leading infectious disease with global public health threat. Its control and management have been complicated by multi-drug resistance and latent infection, which prompts scientists to find new and more effective drugs. With the completion of the genome sequence of the etiologic bacterium, Mycobacterium tuberculosis, it is now feasible to search for new drug targets by sieving through a large number of gene products and conduct genome-scale experiments based on microarray technology. However, the full potential of genome-wide microarray analysis in configuring interrelationships among all genes in M. tuberculosis has yet to be realized. To date, it is only possible to assign a function to 52% of proteins predicted in the genome. Results We conducted a functional-genomics study using the high-resolution Affymetrix oligonucleotide GeneChip. Approximately one-half of the genes were found to be always expressed, including more than 100 predicted conserved hypotheticals, in the genome of M. tuberculosis during the log phase of in vitro growth. The gene expression profiles were analyzed and visualized through cluster analysis to epitomize the full details of genomic behavior. Broad patterns derived from genome-wide expression experiments in this study have provided insight into the interrelationships among genes in the basic cellular processes of M. tuberculosis. Conclusion Our results have confirmed several known gene clusters in energy production, information pathways, and lipid metabolism, and also hinted at potential roles of hypothetical and regulatory proteins.

  16. Relative impact of key sources of systematic noise in Affymetrix and Illumina gene-expression microarray experiments

    Directory of Open Access Journals (Sweden)

    Kitchen Robert R


    Full Text Available Abstract Background Systematic processing noise, which includes batch effects, is very common in microarray experiments but is often ignored despite its potential to confound or compromise experimental results. Compromised results are most likely when re-analysing or integrating datasets from public repositories due to the different conditions under which each dataset is generated. To better understand the relative noise-contributions of various factors in experimental-design, we assessed several Illumina and Affymetrix datasets for technical variation between replicate hybridisations of Universal Human Reference (UHRR and individual or pooled breast-tumour RNA. Results A varying degree of systematic noise was observed in each of the datasets, however in all cases the relative amount of variation between standard control RNA replicates was found to be greatest at earlier points in the sample-preparation workflow. For example, 40.6% of the total variation in reported expressions were attributed to replicate extractions, compared to 13.9% due to amplification/labelling and 10.8% between replicate hybridisations. Deliberate probe-wise batch-correction methods were effective in reducing the magnitude of this variation, although the level of improvement was dependent on the sources of noise included in the model. Systematic noise introduced at the chip, run, and experiment levels of a combined Illumina dataset were found to be highly dependant upon the experimental design. Both UHRR and pools of RNA, which were derived from the samples of interest, modelled technical variation well although the pools were significantly better correlated (4% average improvement and better emulated the effects of systematic noise, over all probes, than the UHRRs. The effect of this noise was not uniform over all probes, with low GC-content probes found to be more vulnerable to batch variation than probes with a higher GC-content. Conclusions The magnitude of systematic

  17. Assessing batch effects of genotype calling algorithm BRLMM for the Affymetrix GeneChip Human Mapping 500 K array set using 270 HapMap samples


    Kaput Jim; Han Tao; Chen James J; Xu Joshua; Fang Hong; Perkins Roger; Shi Leming; Ge Weigong; Su Zhenqiang; Hong Huixiao; Fuscoe James C; Tong Weida


    Abstract Background Genome-wide association studies (GWAS) aim to identify genetic variants (usually single nucleotide polymorphisms [SNPs]) across the entire human genome that are associated with phenotypic traits such as disease status and drug response. Highly accurate and reproducible genotype calling are paramount since errors introduced by calling algorithms can lead to inflation of false associations between genotype and phenotype. Most genotype calling algorithms currently used for GW...

  18. What Expands in an Expanding Universe?

    Directory of Open Access Journals (Sweden)



    Full Text Available ABSTRACT In the present investigation, the possible effects of the expansion of the Universe on systems bonded either by gravitational or electromagnetic forces, are reconsidered. It will be shown that the acceleration (positive or negative of the expanding background, is the determinant factor affecting planetary orbits and atomic sizes. In the presently accepted cosmology (ΛCDM all bonded systems are expanding at a decreasing rate that tends to be zero as the universe enters in a de Sitter phase. It is worth mentioning that the estimated expansion rates are rather small and they can be neglected for all practical purposes.

  19. What Expands in an Expanding Universe? (United States)

    Pacheco, José A De Freitas


    In the present investigation, the possible effects of the expansion of the Universe on systems bonded either by gravitational or electromagnetic forces, are reconsidered. It will be shown that the acceleration (positive or negative) of the expanding background, is the determinant factor affecting planetary orbits and atomic sizes. In the presently accepted cosmology (ΛCDM) all bonded systems are expanding at a decreasing rate that tends to be zero as the universe enters in a de Sitter phase. It is worth mentioning that the estimated expansion rates are rather small and they can be neglected for all practical purposes.

  20. Genotyping Performance between Saliva and Blood-Derived Genomic DNAs on the DMET Array: A Comparison


    Yueshan Hu; Erik A. Ehli; Kelly Nelson; Krista Bohlen; Christophina Lynch; Patty Huizenga; Julie Kittlelsrud; Soundy, Timothy J.; Davies, Gareth E.


    The Affymetrix Drug Metabolism Enzymes and Transporters (DMET) microarray is the first assay to offer a large representation of SNPs conferring genetic diversity across known pharmacokinetic markers. As a convenient and painless alternative to blood, saliva samples have been reported to work well for genotyping on the high density SNP arrays, but no reports to date have examined this application for saliva-derived DNA on the DMET platform. Genomic DNA extractions from saliva samples produced ...

  1. Forehead tissue expander. (United States)

    Kisner, W H


    The use of the forehead flap for nasal reconstruction has long been used by reconstructive surgeons. A case is presented in which comprised forehead skin is utilized following expansion by a tissue expander.

  2. Identification of biomarkers regulated by rexinoids (LGD1069, LG100268 and Ro25-7386) in human breast cells using Affymetrix microarray. (United States)

    Seo, Hye-Sook; Woo, Jong-Kyu; Shin, Yong Cheol; Ko, Seong-Gyu


    Retinoids possess anti-proliferative properties, which suggests that they possess chemopreventive and therapeutic potential against cancer. In the current study, genes modulated by rexinoids (retinoid X receptor (RXR)-pan agonists, LGD1069 and LG100268; and the RXRα agonist, Ro25-7386) were identified using an Affymetrix microarray in normal and malignant breast cells. It was observed that LGD1069, LG100268 and Ro25-7386 suppressed the growth of breast cells. Secondly, several rexinoid-regulated genes were identified, which are involved in cell death, cell growth/maintenance, signal transduction and response to stimulus. These genes may be associated with the growth-suppressive activity of rexinoids. Therefore, the identified genes may serve as biomarkers and novel molecular targets for the prevention and treatment of breast cancer.

  3. On Expanded Cyclic Codes

    CERN Document Server

    Wu, Yingquan


    The paper has a threefold purpose. The first purpose is to present an explicit description of expanded cyclic codes defined in $\\GF(q^m)$. The proposed explicit construction of expanded generator matrix and expanded parity check matrix maintains the symbol-wise algebraic structure and thus keeps many important original characteristics. The second purpose of this paper is to identify a class of constant-weight cyclic codes. Specifically, we show that a well-known class of $q$-ary BCH codes excluding the all-zero codeword are constant-weight cyclic codes. Moreover, we show this class of codes achieve the Plotkin bound. The last purpose of the paper is to characterize expanded cyclic codes utilizing the proposed expanded generator matrix and parity check matrix. We analyze the properties of component codewords of a codeword and particularly establish the precise conditions under which a codeword can be represented by a subbasis. With the new insights, we present an improved lower bound on the minimum distance of...

  4. A Brassica exon array for whole-transcript gene expression profiling.

    Directory of Open Access Journals (Sweden)

    Christopher G Love

    Full Text Available Affymetrix GeneChip® arrays are used widely to study transcriptional changes in response to developmental and environmental stimuli. GeneChip® arrays comprise multiple 25-mer oligonucleotide probes per gene and retain certain advantages over direct sequencing. For plants, there are several public GeneChip® arrays whose probes are localised primarily in 3' exons. Plant whole-transcript (WT GeneChip® arrays are not yet publicly available, although WT resolution is needed to study complex crop genomes such as Brassica, which are typified by segmental duplications containing paralogous genes and/or allopolyploidy. Available sequence data were sampled from the Brassica A and C genomes, and 142,997 gene models identified. The assembled gene models were then used to establish a comprehensive public WT exon array for transcriptomics studies. The Affymetrix GeneChip® Brassica Exon 1.0 ST Array is a 5 µM feature size array, containing 2.4 million 25-base oligonucleotide probes representing 135,201 gene models, with 15 probes per gene distributed among exons. Discrimination of the gene models was based on an E-value cut-off of 1E(-5, with ≤98% sequence identity. The 135 k Brassica Exon Array was validated by quantifying transcriptome differences between leaf and root tissue from a reference Brassica rapa line (R-o-18, and categorisation by Gene Ontologies (GO based on gene orthology with Arabidopsis thaliana. Technical validation involved comparison of the exon array with a 60-mer array platform using the same starting RNA samples. The 135 k Brassica Exon Array is a robust platform. All data relating to the array design and probe identities are available in the public domain and are curated within the BrassEnsembl genome viewer at

  5. Silicon microfabricated beam expander

    Energy Technology Data Exchange (ETDEWEB)

    Othman, A., E-mail:; Ibrahim, M. N.; Hamzah, I. H.; Sulaiman, A. A. [Faculty of Electrical Engineering, Universiti Teknologi MARA Malaysia, 40450, Shah Alam, Selangor (Malaysia); Ain, M. F. [School of Electrical and Electronic Engineering, Engineering Campus, Universiti Sains Malaysia, Seri Ampangan, 14300,Nibong Tebal, Pulau Pinang (Malaysia)


    The feasibility design and development methods of silicon microfabricated beam expander are described. Silicon bulk micromachining fabrication technology is used in producing features of the structure. A high-precision complex 3-D shape of the expander can be formed by exploiting the predictable anisotropic wet etching characteristics of single-crystal silicon in aqueous Potassium-Hydroxide (KOH) solution. The beam-expander consist of two elements, a micromachined silicon reflector chamber and micro-Fresnel zone plate. The micro-Fresnel element is patterned using lithographic methods. The reflector chamber element has a depth of 40 µm, a diameter of 15 mm and gold-coated surfaces. The impact on the depth, diameter of the chamber and absorption for improved performance are discussed.

  6. Silicon microfabricated beam expander (United States)

    Othman, A.; Ibrahim, M. N.; Hamzah, I. H.; Sulaiman, A. A.; Ain, M. F.


    The feasibility design and development methods of silicon microfabricated beam expander are described. Silicon bulk micromachining fabrication technology is used in producing features of the structure. A high-precision complex 3-D shape of the expander can be formed by exploiting the predictable anisotropic wet etching characteristics of single-crystal silicon in aqueous Potassium-Hydroxide (KOH) solution. The beam-expander consist of two elements, a micromachined silicon reflector chamber and micro-Fresnel zone plate. The micro-Fresnel element is patterned using lithographic methods. The reflector chamber element has a depth of 40 µm, a diameter of 15 mm and gold-coated surfaces. The impact on the depth, diameter of the chamber and absorption for improved performance are discussed.

  7. Array2BIO: from microarray expression data to functional annotation of co-regulated genes

    Directory of Open Access Journals (Sweden)

    Rasley Amy


    Full Text Available Abstract Background There are several isolated tools for partial analysis of microarray expression data. To provide an integrative, easy-to-use and automated toolkit for the analysis of Affymetrix microarray expression data we have developed Array2BIO, an application that couples several analytical methods into a single web based utility. Results Array2BIO converts raw intensities into probe expression values, automatically maps those to genes, and subsequently identifies groups of co-expressed genes using two complementary approaches: (1 comparative analysis of signal versus control and (2 clustering analysis of gene expression across different conditions. The identified genes are assigned to functional categories based on Gene Ontology classification and KEGG protein interaction pathways. Array2BIO reliably handles low-expressor genes and provides a set of statistical methods for quantifying expression levels, including Benjamini-Hochberg and Bonferroni multiple testing corrections. An automated interface with the ECR Browser provides evolutionary conservation analysis for the identified gene loci while the interconnection with Crème allows prediction of gene regulatory elements that underlie observed expression patterns. Conclusion We have developed Array2BIO – a web based tool for rapid comprehensive analysis of Affymetrix microarray expression data, which also allows users to link expression data to comparative genomics tools and integrates a system for translating co-expression data into mechanisms of gene co-regulation. Array2BIO is publicly available at

  8. Loss of heterozygosity analyzed by single nucleotide polymorphisrn array in cancer

    Institute of Scientific and Technical Information of China (English)

    HaiTao Zheng; ZhiHai Peng; Sheng Li; Lin He


    Neoplastic progression is generally characterized by the accumulation of multiple genetic alterations including loss of tumor suppression gene function.Loss of heterozygosity (LOH) has been used to identify genomic regions that harbor tumor suppressor genes and to characterize different tumor types, pathological stages and progression. LOH pattern has been detected by allelotyping using restriction fragment length polymorphism, and later by simple sequence length polymorphisms (SSLPs or microsatellite) for 10 years.This paper reviews the detection of LOH by recently developed single nucleotide polymorphism (SNP) arrays (all analyzed by Affymetrix array); furthermore, its advantage and disadvantage were analyzed in several kinds of cancer.

  9. Expanding Student Assessment Opportunities. (United States)

    Bartscher, Beth; Carter, Andrea; Lawlor, Anna; McKelvey, Barbara

    This paper describes an approach for expanding assessment opportunities for students to demonstrate their understanding of content. The targeted population consisted of elementary and junior high school students in two schools in a growing middle-class community in north central Illinois. The elementary school enrolled 467 students and the junior…

  10. Expanding mediation theory

    NARCIS (Netherlands)

    Verbeek, P.P.C.C.


    In his article In Between Us, Yoni van den Eede expands existing theories of mediation into the realm of the social and the political, focusing on the notions of opacity and transparency. His approach is rich and promising, but two pitfalls should be avoided. First, his concept of ‘in-between’ runs

  11. Expanding the HAWC Observatory (United States)

    Mori, Johanna; HAWC Collaboration; College of Idaho; HAWC Collaboration


    To increase the effective area and sensitivity of the High Altitude Water Cherenkov Observatory to gamma-ray photons with energies higher than 10 TeV, we are building 350 smaller outrigger tanks around the main array of 300 existing tanks. HAWC detects cascades of charged particles (``extensive air showers'') created by TeV gamma rays hitting the atmosphere. Increasing the size of the array will improve the sensitivity of the array by a factor of 2 to 4 above 10 TeV, allowing for more accurate gamma-ray origin reconstruction and energy estimation. Building the outrigger array requires carefully calibrated equipment, including PMTs and high voltage signal cables of the correct length. Origin reconstruction relies on precise signal timing, so the signal cables' lengths were standardized so that the signal transit time varied by less than 5 ns. Energy estimation depends on accurate photon counts from each tank, so the PMTs were calibrated with a laser and filter wheels to give the PMTs a known amount of light.

  12. Grazing incidence beam expander

    Energy Technology Data Exchange (ETDEWEB)

    Akkapeddi, P.R.; Glenn, P.; Fuschetto, A.; Appert, Q.; Viswanathan, V.K.


    A Grazing Incidence Beam Expander (GIBE) telescope is being designed and fabricated to be used as an equivalent end mirror in a long laser resonator cavity. The design requirements for this GIBE flow down from a generic Free Electron Laser (FEL) resonator. The nature of the FEL gain volume (a thin, pencil-like, on-axis region) dictates that the output beam be very small. Such a thin beam with the high power levels characteristic of FELs would have to travel perhaps hundreds of meters or more before expanding enough to allow reflection from cooled mirrors. A GIBE, on the other hand, would allow placing these optics closer to the gain region and thus reduces the cavity lengths substantially. Results are presented relating to optical and mechanical design, alignment sensitivity analysis, radius of curvature analysis, laser cavity stability analysis of a linear stable concentric laser cavity with a GIBE. Fabrication details of the GIBE are also given.

  13. MoEDAL expands

    CERN Multimedia

    Anaïs Schaeffer


    The MoEDAL collaboration deployed a test array of 18 plastic Nuclear Track Etch Detector (NTD) stacks – covering an area of 1 m2 – in the MoEDAL/VELO cavern at Point 8 of the LHC ring in November 2009. This small array was supplemented by a further 110 stacks this past January. The MoEDAL test array, which now covers an area of 8 m2, will reveal its secrets early in 2013. The full MoEDAL detector will be installed in the next long shutdown of the LHC in 2013.   View of the MoEDAL detectors installed at Point 8 of the LHC ring in January 2011. MoEDAL (Monopole and Exotics Detector At the LHC), the seventh LHC experiment, was approved by the CERN Research Board at the end of 2009. Its goal is to search for very specific exotics such as highly ionising massive stable (or pseudo-stable) particles with conventional electrical charge and magnetic monopoles. “The main LHC experiments are designed to detect conventionally charged particles, with conventional ionisation patte...

  14. The expanding universe

    CERN Document Server

    Lew, Kristi


    People have always been fascinated with the stars above and the universe that contains them. Over the years, astronomers have developed numerous theories to explain how the universe began, how it works, and what its ultimate fate will be. But all of the scientists' questions are far from answered. The Expanding Universe goes beyond the creation of the universe to explain how scientists think the universe works, grows, and changes, including what great thinkers Isaac Newton and Albert Einstein had to say about its fate. Readers will also learn about how researchers are slowly shedding light on

  15. Expanding Your Horizon 2015

    CERN Multimedia

    Kaltenhauser, Kristin


    Expanding your horizons is a bi-annual “Science Day” for girls aged 11 to 14, held at the University of Geneva on 14 November. The girls had the opportunity to take part in hands-on workshops held by local professional women in the field of science, mathematics, engineering and technology. For the fourth time, CERN was part of this event, offering three workshops as well as a booth at the Discovery Fair, including Higgnite, an interactive visualization of the Higgs Field.

  16. Growth factors in multiple myeloma: a comprehensive analysis of their expression in tumor cells and bone marrow environment using Affymetrix microarrays

    Directory of Open Access Journals (Sweden)

    Meißner Tobias


    Full Text Available Abstract Background Multiple myeloma (MM is characterized by a strong dependence of the tumor cells on their microenvironment, which produces growth factors supporting survival and proliferation of myeloma cells (MMC. In the past few years, many myeloma growth factors (MGF have been described in the literature. However, their relative importance and the nature of the cells producing MGF remain unidentified for many of them. Methods We have analysed the expression of 51 MGF and 36 MGF receptors (MGFR using Affymetrix microarrays throughout normal plasma cell differentiation, in MMC and in cells from the bone marrow (BM microenvironment (CD14, CD3, polymorphonuclear neutrophils, stromal cells and osteoclasts. Results 4/51 MGF and 9/36 MGF-receptors genes were significantly overexpressed in plasmablasts (PPC and BM plasma cell (BMPC compared to B cells whereas 11 MGF and 11 MGFR genes were overexpressed in BMPC compared to PPC. 3 MGF genes (AREG, NRG3, Wnt5A and none of the receptors were significantly overexpressed in MMC versus BMPC. Furthermore, 3/51 MGF genes were overexpressed in MMC compared to the the BM microenvironment whereas 22/51 MGF genes were overexpressed in one environment subpopulation compared to MMC. Conclusions Two major messages arise from this analysis 1 The majority of MGF genes is expressed by the bone marrow environment. 2 Several MGF and their receptors are overexpressed throughout normal plasma cell differentiation. This study provides an extensive and comparative analysis of MGF expression in plasma cell differentiation and in MM and gives new insights in the understanding of intercellular communication signals in MM.

  17. Combining gene expression data from different generations of oligonucleotide arrays

    Directory of Open Access Journals (Sweden)

    Kong Sek


    Full Text Available Abstract Background One of the important challenges in microarray analysis is to take full advantage of previously accumulated data, both from one's own laboratory and from public repositories. Through a comparative analysis on a variety of datasets, a more comprehensive view of the underlying mechanism or structure can be obtained. However, as we discover in this work, continual changes in genomic sequence annotations and probe design criteria make it difficult to compare gene expression data even from different generations of the same microarray platform. Results We first describe the extent of discordance between the results derived from two generations of Affymetrix oligonucleotide arrays, as revealed in cluster analysis and in identification of differentially expressed genes. We then propose a method for increasing comparability. The dataset we use consists of a set of 14 human muscle biopsy samples from patients with inflammatory myopathies that were hybridized on both HG-U95Av2 and HG-U133A human arrays. We find that the use of the probe set matching table for comparative analysis provided by Affymetrix produces better results than matching by UniGene or LocusLink identifiers but still remains inadequate. Rescaling of expression values for each gene across samples and data filtering by expression values enhance comparability but only for few specific analyses. As a generic method for improving comparability, we select a subset of probes with overlapping sequence segments in the two array types and recalculate expression values based only on the selected probes. We show that this filtering of probes significantly improves the comparability while retaining a sufficient number of probe sets for further analysis. Conclusions Compatibility between high-density oligonucleotide arrays is significantly affected by probe-level sequence information. With a careful filtering of the probes based on their sequence overlaps, data from different

  18. Array2BIO: A Comprehensive Suite of Utilities for the Analysis of Microarray Data

    Energy Technology Data Exchange (ETDEWEB)

    Loots, G G; Chain, P G; Mabery, S; Rasley, A; Garcia, E; Ovcharenko, I


    We have developed an integrative and automated toolkit for the analysis of Affymetrix microarray data, named Array2BIO. It identifies groups of coexpressed genes using two complementary approaches--comparative analysis of signal versus control microarrays and clustering analysis of gene expression across different conditions. The identified genes are assigned to functional categories based on the Gene Ontology classification, and a detection of corresponding KEGG protein interaction pathways. Array2BIO reliably handles low-expressor genes and provides a set of statistical methods to quantify the odds of observations, including the Benjamini-Hochberg and Bonferroni multiple testing corrections. Automated interface with the ECR Browser provides evolutionary conservation analysis of identified gene loci while the interconnection with Creme allows high-throughput analysis of human promoter regions and prediction of gene regulatory elements that underlie the observed expression patterns. Array2BIO is publicly available at

  19. The Artful Universe Expanded

    Energy Technology Data Exchange (ETDEWEB)

    Bassett, B A [Institute of Cosmology and Gravitation, University of Portsmouth (United Kingdom)


    The cosmos is an awfully big place and there is no better guide to its vast expanse and fascinating nooks and crannies than John Barrow. A professor of mathematical sciences at Cambridge University, Barrow embodies that rare combination of highly polished writer and expert scientist. His deft touch brings together the disparate threads of human knowledge and weaves them into a tapestry as rich and interesting for the expert as it is for the layperson. The Artful Universe Expanded is an updated edition of this popular book first published in 1995. It explores the deeply profound manner in which natural law and the nature of the cosmos have moulded and shaped us, our cultures and the very form of our arts and music-a new type of 'cosmic' anthropology. The main themes Barrow chooses for revealing this new anthropology are the subjects of evolution, the size of things, the heavens and the nature of music. The book is a large, eclectic repository of knowledge often unavailable to the layperson, hidden in esoteric libraries around the world. It rivals The Da Vinci Code for entertainment value and insights, but this time it is Nature's code that is revealed. It is rare indeed to find common threads drawn through topics as diverse as The Beetles, Bach and Beethoven or between Jackson Pollock, the Aztecs, Kant, Picasso, Byzantine mosaics, uranium-235 and the helix nebula. Barrow unerringly binds them together, presenting them in a stimulating, conversational style that belies the amount of time that must have gone into researching this book. Dip into it at random, or read it from cover to cover, but do read it. The Artful Universe Expanded is an entertaining antidote to the oft-lamented pressures to know more and more about less and less and the apparently inexorable march of specialization. On reading this book one can, for a short time at least, hold in one's mind a vision that unifies science, art and culture and glimpse a universal tapestry of great

  20. The Artful Universe Expanded (United States)

    Barrow, John D.


    Our love of art, writes John Barrow, is the end product of millions of years of evolution. How we react to a beautiful painting or symphony draws upon instincts laid down long before humans existed. Now, in this enhanced edition of the highly popular The Artful Universe , Barrow further explores the close ties between our aesthetic appreciation and the basic nature of the Universe. Barrow argues that the laws of the Universe have imprinted themselves upon our thoughts and actions in subtle and unexpected ways. Why do we like certain types of art or music? What games and puzzles do we find challenging? Why do so many myths and legends have common elements? In this eclectic and entertaining survey, Barrow answers these questions and more as he explains how the landscape of the Universe has influenced the development of philosophy and mythology, and how millions of years of evolutionary history have fashioned our attraction to certain patterns of sound and color. Barrow casts the story of human creativity and thought in a fascinating light, considering such diverse topics as our instinct for language, the origins and uses of color in nature, why we divide time into intervals as we do, the sources of our appreciation of landscape painting, and whether computer-generated fractal art is really art. Drawing on a wide variety of examples, from the theological questions raised by St. Augustine and C.S. Lewis to the relationship between the pure math of Pythagoras and the music of the Beatles, The Artful Universe Expanded covers new ground and enters a wide-ranging debate about the meaning and significance of the links between art and science.

  1. 基于二维微透镜阵列增大手术显微镜出瞳直径方法研究%2D microlens array-based surgical microscope in optical system′s exit pupil expander

    Institute of Scientific and Technical Information of China (English)

    于双双; 史宣; 杜吉; 孟军合


    医生使用传统含目镜系统的手术显微镜进行手术,当其头部移动时,该系统仅存在很小的出瞳直径,因而这就迫使医生在手术过程中长时间保持头部在特定位置。可见,传统手术显微镜存在显著弊端:长时间持续观察会增加医生的疲劳度。对使用二维微透镜阵列(microlens array,MLA)增大目视光学系统出瞳直径进行了理论探讨,并用傅里叶光学原理进行了理论分析。并且在此基础上,设计了增大手术显微镜光学系统出瞳直径的二维微透镜阵列器件,该二维微透镜阵列器件中两个折射面相对放置,且两者相距一个微透镜单元焦距的长度。经计算机模拟计算证明,使用该二维微透镜阵列器件可以有效增大目视光学系统出瞳直径,并可获得更加均匀的出射光束。%The conventional surgical microscope uses eyepiece lens systems which have very small exit pupil to occur when the observer moves his head during observation, thereby obliging the observer to keep his head at a constant position while he performs the operations described above. Therefore, the conventional surgical microscope has a defect that it gives a strong feeling of fatigue when he continues observation for a long time. Two dimensional microlens array(MLA) can be used in wearable applications as exit pupil expanders to increase the size of the optical system exit pupil. Fourier optics theory was used to derive the analytical formulas, and physical optics beam propagation was used for numerical computations. The MLA′s reflective surface was spaced from the other focal curve about a focal length. A dual-MLA is proved that can produces excellent exit-pupil, and it can often generate output beamlets that have a more uniform brightness.

  2. TiArA: a virtual appliance for the analysis of Tiling Array data.

    Directory of Open Access Journals (Sweden)

    Jason A Greenbaum

    Full Text Available BACKGROUND: Genomic tiling arrays have been described in the scientific literature since 2003, yet there is a shortage of user-friendly applications available for their analysis. METHODOLOGY/PRINCIPAL FINDINGS: Tiling Array Analyzer (TiArA is a software program that provides a user-friendly graphical interface for the background subtraction, normalization, and summarization of data acquired through the Affymetrix tiling array platform. The background signal is empirically measured using a group of nonspecific probes with varying levels of GC content and normalization is performed to enforce a common dynamic range. CONCLUSIONS/SIGNIFICANCE: TiArA is implemented as a standalone program for Linux systems and is available as a cross-platform virtual machine that will run under most modern operating systems using virtualization software such as Sun VirtualBox or VMware. The software is available as a Debian package or a virtual appliance at

  3. Phased-array vector velocity estimation using transverse oscillations

    DEFF Research Database (Denmark)

    Pihl, Michael Johannes; Marcher, Jønne; Jensen, Jørgen Arendt


    A method for estimating the 2-D vector velocity of blood using a phased-array transducer is presented. The approach is based on the transverse oscillation (TO) method. The purposes of this work are to expand the TO method to a phased-array geometry and to broaden the potential clinical applicabil......A method for estimating the 2-D vector velocity of blood using a phased-array transducer is presented. The approach is based on the transverse oscillation (TO) method. The purposes of this work are to expand the TO method to a phased-array geometry and to broaden the potential clinical...

  4. Helical Screw Expander Evaluation Project. Final report

    Energy Technology Data Exchange (ETDEWEB)

    McKay, R.


    A functional 1-MW geothermal electric power plant that featured a helical screw expander was produced and then tested in Utah in 1978 to 1979 with a demonstrated average performance of approximately 45% machine efficiency over a wide range of test conditions in noncondensing operation on two-phase geothermal fluids. The Project also produced a computer-equipped data system, an instrumentation and control van, and a 1000-kW variable load bank, all integrated into a test array designed for operation at a variety of remote test sites. Additional testing was performed in Mexico in 1980 under a cooperative test program using the same test array, and machine efficiency was measured at 62% maximum with the rotors partially coated with scale, compared with approximately 54% maximum in Utah with uncoated rotors, confirming the importance of scale deposits within the machine on performance. Data are presented for the Utah testing and for the noncondensing phases of the testing in Mexico. Test time logged was 437 hours during the Utah tests and 1101 hours during the Mexico tests.

  5. Trivalent expanders and hyperbolic surfaces

    CERN Document Server

    Ivrissimtzis, Ioannis; Vdovina, Alina


    We introduce a family of trivalent expanders which tessellate compact hyperbolic surfaces with large isometry groups. We compare this family with Platonic graphs and modifications of them and prove topological and spectral properties of these families.

  6. Global Arrays

    Energy Technology Data Exchange (ETDEWEB)

    Krishnamoorthy, Sriram; Daily, Jeffrey A.; Vishnu, Abhinav; Palmer, Bruce J.


    Global Arrays (GA) is a distributed-memory programming model that allows for shared-memory-style programming combined with one-sided communication, to create a set of tools that combine high performance with ease-of-use. GA exposes a relatively straightforward programming abstraction, while supporting fully-distributed data structures, locality of reference, and high-performance communication. GA was originally formulated in the early 1990’s to provide a communication layer for the Northwest Chemistry (NWChem) suite of chemistry modeling codes that was being developed concurrently.

  7. Federal government expands compliance initiatives. (United States)

    Dugan, J K


    In 1995, the Federal government initiated Operation Restore Trust to increase enforcement of fraud and abuse regulations in Medicare and Medicaid programs. With the success of the original initiative, the government is expanding the project to additional states and program areas. The initial scrutiny of home health agencies, nursing homes, hospice care, and durable medical equipment is being expanded to managed care plans and acute care hospitals with an eye toward DRG creep. To manage this increased enforcement activity, healthcare organizations should institute comprehensive corporate compliance programs. Such programs should provide a framework that delineates responsibilities and provides a systematic means to resolve issues in a timely manner.

  8. Uniparental disomy: can SNP array data be used for diagnosis? (United States)

    Tucker, Tracy; Schlade-Bartusiak, Kamilla; Eydoux, Patrice; Nelson, Tanya N; Brown, Lindsay


    Purpose:Single-nucleotide polymorphism microarray analysis identifies copy-number variants and blocks of homozygosity, suggestive of consanguinity or uniparental disomy. The purpose of this study was to validate chromosomal microarray analysis for the identification of uniparental disomy in a clinical laboratory.Methods:In phase I of this retrospective study, nine cases with uniparental disomy for chromosomes 7 (n = 1), 14 (n = 1), and 15 (n = 7), identified by conventional polymorphic microsatellite marker analysis were analyzed on the Affymetrix 6.0 single-nucleotide polymorphism array. In phase II, four cases of uniparental disomy 15 showing heterozygosity for all microsatellite markers were analyzed using the same array.Results:Chromosomal microarray analysis detected blocks of homozygosity in eight of the nine cases in phase I. Phase II analysis of molecularly defined heterodisomy failed to detect blocks of homozygosity in three of the four cases. The four cases in which microarray did not detect blocks of homozygosity all involved chromosome 15.Conclusion:A failure to recombine may predispose to nondisjunction and, therefore, to uniparental disomy. Four cases of heterodisomy 15 were not detected by array, suggesting a lack of recombination. Therefore, a normal chromosomal microarray result for chromosome 15 does not exclude the possibility of uniparental disomy. This observation may apply to other chromosomes; however, further study is needed.Genet Med advance online publication 26 April 2012.

  9. Introduction to parallel algorithms and architectures arrays, trees, hypercubes

    CERN Document Server

    Leighton, F Thomson


    Introduction to Parallel Algorithms and Architectures: Arrays Trees Hypercubes provides an introduction to the expanding field of parallel algorithms and architectures. This book focuses on parallel computation involving the most popular network architectures, namely, arrays, trees, hypercubes, and some closely related networks.Organized into three chapters, this book begins with an overview of the simplest architectures of arrays and trees. This text then presents the structures and relationships between the dominant network architectures, as well as the most efficient parallel algorithms for

  10. Expanding the eukaryotic genetic code (United States)

    Chin, Jason W.; Cropp, T. Ashton; Anderson, J. Christopher; Schultz, Peter G.


    This invention provides compositions and methods for producing translational components that expand the number of genetically encoded amino acids in eukaryotic cells. The components include orthogonal tRNAs, orthogonal aminoacyl-tRNA synthetases, orthogonal pairs of tRNAs/synthetases and unnatural amino acids. Proteins and methods of producing proteins with unnatural amino acids in eukaryotic cells are also provided.

  11. Expanding the eukaryotic genetic code

    Energy Technology Data Exchange (ETDEWEB)

    Chin, Jason W.; Cropp, T. Ashton; Anderson, J. Christopher; Schultz, Peter G.


    This invention provides compositions and methods for producing translational components that expand the number of genetically encoded amino acids in eukaryotic cells. The components include orthogonal tRNAs, orthogonal aminoacyl-tRNA synthetases, orthogonal pairs of tRNAs/synthetases and unnatural amino acids. Proteins and methods of producing proteins with unnatural amino acids in eukaryotic cells are also provided.

  12. ERBU, Expanding Rubber Band Universe

    CERN Document Server

    Soares, Domingos


    I put forward a simple unidimensional mechanical analogue of the three-dimensional universe models of modern relativistic cosmology. The main goal of the proposal is the appropriate appreciation of the intrinsic relationship between Hubble's law and the homogeneity of expanding relativistic models.

  13. Expandable Shelter/Container Report. (United States)


    without removing whatever payload might be in the contai ner. Equ i pment located in the expanded porti on of the ES/C durin g norma l operat i ons is...and Supply BattalIon , Div isi on Support Coianand. In addition , divisional avIation battalions have an A Irc raft Maintenance Company. The TOE

  14. 47 CFR 64.1401 - Expanded interconnection. (United States)


    ... 47 Telecommunication 3 2010-10-01 2010-10-01 false Expanded interconnection. 64.1401 Section 64...) MISCELLANEOUS RULES RELATING TO COMMON CARRIERS Expanded Interconnection § 64.1401 Expanded interconnection. (a... 69, subpart G of this chapter, shall offer expanded interconnection for interstate special...

  15. Expanding the Game Design Space

    DEFF Research Database (Denmark)

    Larsen, Lasse Juel; Majgaard, Gunver


    This article considers game design research in educational settings. Its focus is on how undergraduate students – particularly engineering students – learn computer game design. From observations conducted during our game design courses we have developed a model of expanded game design space....... It encapsulates the entire development process from the first ideas to the final game with emphasis on game design thinking. Our model of expanded game design space consists of four separate – yet interconnected – layers in the process of game development. The first layer addresses the importance of framing......, providing a clear game design assignment that involves the formulation of intended player experience and a description of game mechanics. The second layer focuses on game design thinking from six different aspects of game design chosen in relation to the framing of the game design assignment. The third...

  16. Expandable bioresorbable endovascular stent. I. Fabrication and properties. (United States)

    Su, Shih-Horng; Chao, Robert Y N; Landau, Charles L; Nelson, Kevin D; Timmons, Richard B; Meidell, Robert S; Eberhart, Robert C


    A bioresorbable, expandable poly(L-lactic acid) stent has been designed, based on a linear, continuous coil array principle, by which multiple furled lobes convert to a single lobe upon balloon expansion, without heating. Stent strength and compliance are sufficient to permit deployment by a conventional balloon angioplasty catheter. Several multiple lobe configurations were investigated, with expansion ratios ranging from 1.4 to 1.9 and expanded diameters ranging from 2.3 to 4.7 mm. Compression resistance of the expanded stent is dependent on fiber coil density and fiber ply. A range sufficient for endovascular service was obtained, with less than 4% elastic recoil in six day saline incubation studies. Surface plasma treatment with di(ethylene glycol) vinyl ether significantly reduced platelet adhesion in a 1 h porcine arteriovenous shunt model. Patency was maintained in one week implant studies in the porcine common femoral artery. However, a strong inflammatory response, and significant reduction of the vascular lumen were observed following two weeks implantation. The design principles and fabrication techniques for this bioresorbable stent are sufficiently versatile that a broad range of applications can be addressed. Much work remains to be done, including long-term evaluation of the inflammatory response, and of polymer degradation. The results of this study demonstrate the feasibility of expandable biodegradable stent design and deployment by conventional means.

  17. Analysis of Chinese women with primary ovarian insufficiency by high resolution array-comparative genomic hybridization

    Institute of Scientific and Technical Information of China (English)

    LIAO Can; FU Fang; YANG Xin; SUN Yi-min; LI Dong-zhi


    Background Primary ovarian insufficiency (POI) is defined as a primary ovarian defect characterized by absent menarche (primary amenorrhea) or premature depletion of ovarian follicles before the age of 40 years. The etiology of primary ovarian insufficiency in human female patients is still unclear. The purpose of this study is to investigate the potential genetic causes in primary amenorrhea patients by high resolution array based comparative genomic hybridization (array-CGH) analysis.Methods Following the standard karyotyping analysis, genomic DNA from whole blood of 15 primary amenorrhea patients and 15 normal control women was hybridized with Affymetrix cytogenetic 2.7M arrays following the standard protocol. Copy number variations identified by array-CGH were confirmed by real time polymerase chain reaction.Results All the 30 samples were negative by conventional karyotyping analysis. Microdeletions on chromosome 17q21.31-q21.32 with approximately 1.3 Mb were identified in four patients by high resolution array-CGH analysis. This included the female reproductive secretory pathway related factor N-ethylmaleimide-sensitive factor (NSF) gene.Conclusions The results of the present study suggest that there may be critical regions regulating primary ovarian insufficiency in women with a 17q21.31-q21.32 microdeletion. This effect might be due to the loss of function of the NSF gene/genes within the deleted region or to effects on contiguous genes.

  18. Genome-wide mapping of copy number variation in humans: comparative analysis of high resolution array platforms.

    Directory of Open Access Journals (Sweden)

    Rajini R Haraksingh

    Full Text Available Accurate and efficient genome-wide detection of copy number variants (CNVs is essential for understanding human genomic variation, genome-wide CNV association type studies, cytogenetics research and diagnostics, and independent validation of CNVs identified from sequencing based technologies. Numerous, array-based platforms for CNV detection exist utilizing array Comparative Genome Hybridization (aCGH, Single Nucleotide Polymorphism (SNP genotyping or both. We have quantitatively assessed the abilities of twelve leading genome-wide CNV detection platforms to accurately detect Gold Standard sets of CNVs in the genome of HapMap CEU sample NA12878, and found significant differences in performance. The technologies analyzed were the NimbleGen 4.2 M, 2.1 M and 3×720 K Whole Genome and CNV focused arrays, the Agilent 1×1 M CGH and High Resolution and 2×400 K CNV and SNP+CGH arrays, the Illumina Human Omni1Quad array and the Affymetrix SNP 6.0 array. The Gold Standards used were a 1000 Genomes Project sequencing-based set of 3997 validated CNVs and an ultra high-resolution aCGH-based set of 756 validated CNVs. We found that sensitivity, total number, size range and breakpoint resolution of CNV calls were highest for CNV focused arrays. Our results are important for cost effective CNV detection and validation for both basic and clinical applications.

  19. Coupling in reflector arrays

    DEFF Research Database (Denmark)

    Appel-Hansen, Jørgen


    In order to reduce the space occupied by a reflector array, it is desirable to arrange the array antennas as close to each other as possible; however, in this case coupling between the array antennas will reduce the reflecting properties of the reflector array. The purpose of the present communic...

  20. Black holes in an expanding universe. (United States)

    Gibbons, Gary W; Maeda, Kei-ichi


    An exact solution representing black holes in an expanding universe is found. The black holes are maximally charged and the universe is expanding with arbitrary equation of state (P = w rho with -1 black hole temperature.

  1. Collapsible truss structure is automatically expandable (United States)


    Coil springs wound with maximum initial tension in a three-truss, closed loop structure form a collapsible truss structure. The truss automatically expands and provides excellent rigidity and close dimensional tolerance when expanded.

  2. Shear Acceleration in Expanding Flows

    CERN Document Server

    Rieger, F M


    Shear flows are naturally expected to occur in astrophysical environments and potential sites of continuous non-thermal Fermi-type particle acceleration. Here we investigate the efficiency of expanding relativistic outflows to facilitate the acceleration of energetic charged particles to higher energies. To this end, the gradual shear acceleration coefficient is derived based on an analytical treatment. The results are applied to the context of the relativistic jets of active galactic nuclei. The inferred acceleration timescale is investigated for a variety of conical flow profiles (i.e., power law, Gaussian, Fermi-Dirac) and compared to the relevant radiative and non-radiative loss timescales. The results exemplify that relativistic shear flows are capable of boosting cosmic-rays to extreme energies. Efficient electron acceleration, on the other hand, requires weak magnetic fields and may thus be accompanied by a delayed onset of particle energization and affect the overall jet appearance (e.g., core, ridge ...

  3. OCT Expanded Clinical Data Analysis (United States)

    Van Baalen, Mary; Tafreshi, Ali; Patel, Nimesh; Young, Millennia; Mason, Sara; Otto, Christian; Samuels, Brian; Koslovsky, Matthew; Schaefer, Caroline; Taiym, Wafa; Wear, Mary; Gibson, Charles; Tarver, William


    Vision changes identified in long duration space fliers has led to a more comprehensive clinical monitoring protocol. Optical Coherence Tomography (OCT) was recently implemented on board the International Space Station in 2013. NASA is collaborating with Heidelberg Engineering to expand our current OCT data analysis capability by implementing a volumetric approach. Volumetric maps will be created by combining the circle scan, the disc block scan, and the radial scan. This assessment may provide additional information about the optic nerve and further characterize changes related microgravity exposure. We will discuss challenges with collection and analysis of OCT data, present the results of this reanalysis and outline the potential benefits and limitations of the additional data.

  4. Expanding Lookout Capabilities for Architectural Analysis (United States)

    Shick, B.

    SMC/SYSW/ENY's Lookout tool provides a M&S capability for architectural analysis. It models the contributions of ground and space-based assets in several mission threads and scenarios to quantify overall Space Situational Awareness (SSA) capability. Plotting performance results versus costs enables decision makers to identify and evaluate Best Value families of systems and combinations of architectures. Currently, SMC intends to use Lookout to impact the Fiscal Year 2012 budget programming cycle, the National SSA Initial Capabilities Document (ICD) and Architecture definition effort, planning for programs of record, and AFSPC & SMC leadership. Ultimately, Lookout will enable additional space superiority analysis. Previous Lookout work focused on modeling the metric tracking capabilities of the Space Surveillance Network (detecting and tracking) and proposed concepts to close identified collection shortfalls. SMC/SYSW/ENY leveraged some of the lessons learned in developing and implementing the metric tracking models to expand Lookout to develop an initial characterization capability, including non-resolved space object identification (SOI), imaging, and Foreign Instrumentation and Signals (FIS) Intelligence. Characterization collection phenomenologies added in FY08 and FY09 include mechanical tracking and phased array radars, visible telescopes, and signals collection. Lookout enables evaluating the characterization collections for quantity, quality, and timeliness. Capturing the Tasking, Collection, Processing, Exploitation, and Dissemination processes represent one of the biggest challenges in including characterization capabilities in mission thread and scenario-based analysis. The SMC/SYSW/ENY team met with several representatives of the community and held community-wide Technical Interchange Meetings. Based on feedback from these meetings, SMC created an infrastructure for modeling the tasking processes and scales to relate collection quality to intelligence

  5. Development of a high-throughput resequencing array for the detection of pathogenic mutations in osteogenesis imperfecta.

    Directory of Open Access Journals (Sweden)

    Yao Wang

    Full Text Available Osteogenesis imperfecta (OI is a rare inherited skeletal disease, characterized by bone fragility and low bone density. The mutations in this disorder have been widely reported to be on various exonal hotspots of the candidate genes, including COL1A1, COL1A2, CRTAP, LEPRE1, and FKBP10, thus creating a great demand for precise genetic tests. However, large genome sizes make the process daunting and the analyses, inefficient and expensive. Therefore, we aimed at developing a fast, accurate, efficient, and cheaper sequencing platform for OI diagnosis; and to this end, use of an advanced array-based technique was proposed.A CustomSeq Affymetrix Resequencing Array was established for high-throughput sequencing of five genes simultaneously. Genomic DNA extraction from 13 OI patients and 85 normal controls and amplification using long-range PCR (LR-PCR were followed by DNA fragmentation and chip hybridization, according to standard Affymetrix protocols. Hybridization signals were determined using GeneChip Sequence Analysis Software (GSEQ. To examine the feasibility, the outcome from new resequencing approach was validated by conventional capillary sequencing method.Overall call rates using resequencing array was 96-98% and the agreement between microarray and capillary sequencing was 99.99%. 11 out of 13 OI patients with pathogenic mutations were successfully detected by the chip analysis without adjustment, and one mutation could also be identified using manual visual inspection.A high-throughput resequencing array was developed that detects the disease-associated mutations in OI, providing a potential tool to facilitate large-scale genetic screening for OI patients. Through this method, a novel mutation was also found.

  6. Classification of Dukes' B and C colorectal cancers using expression arrays

    DEFF Research Database (Denmark)

    Frederiksen, C.M.; Knudsen, Steen; Laurberg, S.;


    Purpose. Colorectal cancer is one of the most common malignancies. Substaging of the cancer is of importance not only to prognosis but also to treatment. Classification of substages based on DNA microarray technology is currently the most promising approach. We therefore investigated if gene...... expression microarrays could be used to classify colorectal tumors. Methods. We used the Affymetrix oligonucleotide arrays to analyze the expression of more than 5,000 genes in samples from the sigmoid and upper rectum of the left colon. Five samples were from normal mucosa and five samples from each......' A and D could not be classified correctly. A number of interesting gene clusters showed a discriminating difference between Dukes' B and C samples. These included mitochondrial genes, stromal remodeling genes, and genes related to cell adhesion. Conclusion. Molecular classification based on gene...

  7. Discovery of Uniformly Expanding Universe

    Directory of Open Access Journals (Sweden)

    Cahill R. T.


    Full Text Available Saul Perlmutter and the Brian Schmidt – Adam Riess teams reported that their Friedmann-model GR-based analysis of their supernovae magnitude-redshift data re- vealed a new phenomenon of “dark energy” which, it is claimed, forms 73% of the energy / matter density of the present-epoch universe, and which is linked to the further claim of an accelerating expansion of the universe. In 2011 Perlmutter, Schmidt and Riess received the Nobel Prize in Physics “for the discovery of the accelerating ex- pansion of the Universe through observations of distant supernovae”. Here it is shown that (i a generic model-independent analysis of this data reveals a uniformly expanding universe, (ii their analysis actually used Newtonian gravity, and finally (iii the data, as well as the CMB fluctuation data, does not require “dark energy” nor “dark matter”, but instead reveals the phenomenon of a dynamical space, which is absent from the Friedmann model.

  8. Cat Scratch Disease: Expanded Spectrum (United States)

    Aziz, Hassan A.; Plesec, Thomas P.; Sabella, Camille; Udayasankar, Unni K.; Singh, Arun D.


    Background To expand the spectrum of ophthalmic manifestations in cat scratch disease. Methods Case report. Results A 7-year-old male was referred for evaluation of his left optic disc after failing vision screening test at school. His visual acuity was 20/20 OD and light perception OS. Fundus examination showed a left optic disc lesion associated with an exudative retinal detachment and vitreous seeding. Ultrasonography revealed a 7 × 7.5 × 3.8 mm lesion with a possible 6.3 mm of retrolaminar extension into the substance of the optic nerve. Brain MRI did not show evidence of optic nerve involvement but revealed a 6-mm nodule of the pineal gland suggestive of a pineoblastoma. Enucleation was performed and histopathology revealed a suppurative granulomatous inflammation suggestive of Bartonella infection. Upon further questioning, the patient had recent exposure to kittens with areas of cat scratches along both of his arms. He was subsequently referred to and treated with a 2-week course of trimethoprim-sulfamethoxazole and rifampin by the pediatric infectious disease specialist. Repeat brain MRI showed interval total resolution of enlarged pineal gland. Conclusion: Optic nerve granulomas are a rare presentation of cat scratch disease and could potentially masquerade as retinoblastoma. PMID:27843905

  9. Expanding mTOR signaling

    Institute of Scientific and Technical Information of China (English)

    Qian Yang; Kun-Liang Guan


    The mammalian target of rapamycin (mTOR) has drawn much attention recently because of its essential role in cell growth control and its involvement in human tumorigenesis. Great endeavors have been made to elucidate the functions and regulation of mTOR in the past decade. The current prevailing view is that mTOR regulates many fundamental biological processes, such as cell growth and survival, by integrating both intracellular and extracellular signals, including growth factors, nutrients, energy levels, and cellular stress. The significance of mTOR has been highlighted most recently by the identification of mTOR-associated proteins. Amazingly, when bound to different proteins, mTOR forms distinctive complexes with very different physiological functions. These findings not only expand the roles that mTOR plays in cells but also further complicate the regulation network. Thus, it is now even more critical that we precisely understand the underlying molecular mechanisms in order to directly guide the development and usage of anti-cancer drugs targeting the mTOR signaling pathway. In this review, we will discuss different mTOR-associated proteins, the regulation of mTOR complexes, and the consequences of mTOR dysregulation under pathophysiological conditions.

  10. The Square Kilometer Array (United States)

    Cordes, James M.


    The SKA is an observatory for m/cm wavelengths that will provide quantum leaps in studies of the early universe, the high-energy universe, and astrobiology. Key science areas include:(1) Galaxy Evolution and Large-Scale Structure, including Dark Energy;(2) Probing the Dark Ages through studies of highly redshifted hydrogen and carbon monoxide;(3) Cosmic magnetism;(4) Probing Gravity with Pulsars and Black Holes; and(5) The Cradle of Life, including real-time images of protoplanetary disks, inventory of organic molecules, and the search for signals from extraterrestrial intelligence.From a phase-space point of view, the SKA will expand enormously our ability to discover new and known phenomena, including transient sources with time scales from nano-seconds to years. Particular examples include coherent emissions from extrasolar planets and gamma-ray burst afterglows, detectable at levels 100 times smaller than currently. Specifications needed to meet the science requirements are technically quite challenging: a frequency range of approximately 0.1 to 25 GHz; wide field of view, tens of square degrees (frequency dependent); high dynamic range and image fidelity; flexibility in imaging on scales from sub-mas to degrees; and sampling the time-frequency domain as demanded by transient objects. Meeting these specifications requires collaboration of a world-wide group of engineers and scientists. For this and other reasons, the SKA will be realized internationally. Initially, several concepts have been explored for building inexpensive collecting area that provides broad frequency coverage. The Reference Design now specifies an SKA based on a large number of small-diameter dish antennas with "smart feeds." Complementary to the dishes is a phased aperture array that will provide very wide-field capability. I will discuss the Reference Design, along with a timeline for developing the technology, building the first 10% of the SKA, and finishing the full SKA, along with the

  11. An Affymetrix Microarray Design for Microbial Genotyping (United States)


    5 Staphylococcus haemolyticus JCSC 1435 80 Staphylococcus haemolyticus HPT haemolyticus 5 Staphylococcus saprophyticus HPT saprophyticus 5... Staphylococcus saprophyticus ATCC 15305 95 Streptococcus agalactiae APRT A909 5 Streptococcus agalactiae 2603 V/R 145 Streptococcus agalactiae A909 200...plasmid pSS_046 15 Staphylococcus aureus APRT N315 5 Staphylococcus aureus HPT aureus 5 Staphylococcus aureus aureus 45 Staphylococcus aureus COL

  12. Clocked combustor can array

    Energy Technology Data Exchange (ETDEWEB)

    Kim, Won-Wook; McMahan, Kevin Weston; Srinivasan, Shiva Kumar


    The present application provides a clocked combustor can array for coherence reduction in a gas turbine engine. The clocked combustor can array may include a number of combustor cans positioned in a circumferential array. A first set of the combustor cans may have a first orientation and a second set of the combustor cans may have a second orientation.


    Directory of Open Access Journals (Sweden)

    Klaus Weidenhaupt


    Full Text Available The Auger Engineering Radio Array currently measures MHz radio emission from extensive air showers induced by high energy cosmic rays with 24 self-triggered radio detector stations. Its unique site, embedded into the baseline detectors and extensions of the Pierre Auger Observatory, allows to study air showers in great detail and to calibrate the radio emission. In its final stage AERA will expand to an area of approximately 20km2 to explore the feasibility of the radio-detection technique for future cosmic-ray detectors. The concept and hardware design of AERA as well as strategies to enable self-triggered radio detection are presented. Radio emission mechanisms are discussed based on polarization analysis of the first AERA data.

  14. The Colorado Lightning Mapping Array (United States)

    Rison, W.; Krehbiel, P. R.; Thomas, R. J.; Rodeheffer, D.; Fuchs, B.


    A fifteen station Lightning Mapping Array (LMA) was installed in northern Colorado in the spring of 2012. While the driving force for the array was to produce 3-dimensional lightning data to support the Deep Convective Clouds and Chemistry (DC3) Experiment (Barth, this conference), data from the array are being used for several other projects. These include: electrification studies in conjunction with the CSU CHILL radar (Lang et al, this conference); observations of the parent lightning discharges of sprites (Lyons et al, this conference); trying to detect upward discharges triggered by wind turbines, characterizing conditions in which aircraft flying through clouds produce discharges which can be detected by the LMA, and other opportunities, such as observations of lightning in pyrocumulus clouds produced by the High Park Fire west of Fort Collins, CO. All the COLMA stations are solar-powered, and use broadband cellular modems for data communications. This makes the stations completely self-contained and autonomous, allowing a station to be installed anywhere a cellular signal is available. Because most of the stations were installed well away from anthropogenic noise sources, the COLMA is very sensitive. This is evidenced by the numerous plane tracks detected in its the vicinity. The diameter, D, of the COLMA is about 100 km, significantly larger than other LMAs. Because the error in the radial distance r is proportional to (r/D)2, and the error in the altitude z is proportional to (z/D)2, the larger array diameter greatly expands the usable range of the COLMA. The COLMA is able to detect and characterize lighting flashes to a distance of about 350 km from the array center. In addition to a web-based display (, geo-referenced images are produced and updated at one-minute intervals. These geo-referenced images can be used to overlay the real-time lightning data on Google Earth and other mapping software. These displays were used by the DC3

  15. Compensated individually addressable array technology for human breast imaging (United States)

    Lewis, D. Kent


    A method of forming broad bandwidth acoustic or microwave beams which encompass array design, array excitation, source signal preprocessing, and received signal postprocessing. This technique uses several different methods to achieve improvement over conventional array systems. These methods are: 1) individually addressable array elements; 2) digital-to-analog converters for the source signals; 3) inverse filtering from source precompensation; and 4) spectral extrapolation to expand the bandwidth of the received signals. The components of the system will be used as follows: 1) The individually addressable array allows scanning around and over an object, such as a human breast, without any moving parts. The elements of the array are broad bandwidth elements and efficient radiators, as well as detectors. 2) Digital-to-analog converters as the source signal generators allow virtually any radiated field to be created in the half-space in front of the array. 3) Preprocessing allows for corrections in the system, most notably in the response of the individual elements and in the ability to increase contrast and resolution of signal propagating through the medium under investigation. 4) Postprocessing allows the received broad bandwidth signals to be expanded in a process similar to analytic continuation. Used together, the system allows for compensation to create beams of any desired shape, control the wave fields generated to correct for medium differences, and improve contract and resolution in and through the medium.

  16. A forward-backward fragment assembling algorithm for the identification of genomic amplification and deletion breakpoints using high-density single nucleotide polymorphism (SNP array

    Directory of Open Access Journals (Sweden)

    Bailey Dione K


    Full Text Available Abstract Background DNA copy number aberration (CNA is one of the key characteristics of cancer cells. Recent studies demonstrated the feasibility of utilizing high density single nucleotide polymorphism (SNP genotyping arrays to detect CNA. Compared with the two-color array-based comparative genomic hybridization (array-CGH, the SNP arrays offer much higher probe density and lower signal-to-noise ratio at the single SNP level. To accurately identify small segments of CNA from SNP array data, segmentation methods that are sensitive to CNA while resistant to noise are required. Results We have developed a highly sensitive algorithm for the edge detection of copy number data which is especially suitable for the SNP array-based copy number data. The method consists of an over-sensitive edge-detection step and a test-based forward-backward edge selection step. Conclusion Using simulations constructed from real experimental data, the method shows high sensitivity and specificity in detecting small copy number changes in focused regions. The method is implemented in an R package FASeg, which includes data processing and visualization utilities, as well as libraries for processing Affymetrix SNP array data.

  17. Electronic Switch Arrays for Managing Microbattery Arrays (United States)

    Mojarradi, Mohammad; Alahmad, Mahmoud; Sukumar, Vinesh; Zghoul, Fadi; Buck, Kevin; Hess, Herbert; Li, Harry; Cox, David


    Integrated circuits have been invented for managing the charging and discharging of such advanced miniature energy-storage devices as planar arrays of microscopic energy-storage elements [typically, microscopic electrochemical cells (microbatteries) or microcapacitors]. The architecture of these circuits enables implementation of the following energy-management options: dynamic configuration of the elements of an array into a series or parallel combination of banks (subarrarys), each array comprising a series of parallel combination of elements; direct addressing of individual banks for charging/or discharging; and, disconnection of defective elements and corresponding reconfiguration of the rest of the array to utilize the remaining functional elements to obtain the desited voltage and current performance. An integrated circuit according to the invention consists partly of a planar array of field-effect transistors that function as switches for routing electric power among the energy-storage elements, the power source, and the load. To connect the energy-storage elements to the power source for charging, a specific subset of switches is closed; to connect the energy-storage elements to the load for discharging, a different specific set of switches is closed. Also included in the integrated circuit is circuitry for monitoring and controlling charging and discharging. The control and monitoring circuitry, the switching transistors, and interconnecting metal lines are laid out on the integrated-circuit chip in a pattern that registers with the array of energy-storage elements. There is a design option to either (1) fabricate the energy-storage elements in the corresponding locations on, and as an integral part of, this integrated circuit; or (2) following a flip-chip approach, fabricate the array of energy-storage elements on a separate integrated-circuit chip and then align and bond the two chips together.

  18. ExonMiner: Web service for analysis of GeneChip Exon array data (United States)

    Numata, Kazuyuki; Yoshida, Ryo; Nagasaki, Masao; Saito, Ayumu; Imoto, Seiya; Miyano, Satoru


    Background Some splicing isoform-specific transcriptional regulations are related to disease. Therefore, detection of disease specific splice variations is the first step for finding disease specific transcriptional regulations. Affymetrix Human Exon 1.0 ST Array can measure exon-level expression profiles that are suitable to find differentially expressed exons in genome-wide scale. However, exon array produces massive datasets that are more than we can handle and analyze on personal computer. Results We have developed ExonMiner that is the first all-in-one web service for analysis of exon array data to detect transcripts that have significantly different splicing patterns in two cells, e.g. normal and cancer cells. ExonMiner can perform the following analyses: (1) data normalization, (2) statistical analysis based on two-way ANOVA, (3) finding transcripts with significantly different splice patterns, (4) efficient visualization based on heatmaps and barplots, and (5) meta-analysis to detect exon level biomarkers. We implemented ExonMiner on a supercomputer system in order to perform genome-wide analysis for more than 300,000 transcripts in exon array data, which has the potential to reveal the aberrant splice variations in cancer cells as exon level biomarkers. Conclusion ExonMiner is well suited for analysis of exon array data and does not require any installation of software except for internet browsers. What all users need to do is to access the ExonMiner URL . Users can analyze full dataset of exon array data within hours by high-level statistical analysis with sound theoretical basis that finds aberrant splice variants as biomarkers. PMID:19036125

  19. ExonMiner: Web service for analysis of GeneChip Exon array data

    Directory of Open Access Journals (Sweden)

    Imoto Seiya


    Full Text Available Abstract Background Some splicing isoform-specific transcriptional regulations are related to disease. Therefore, detection of disease specific splice variations is the first step for finding disease specific transcriptional regulations. Affymetrix Human Exon 1.0 ST Array can measure exon-level expression profiles that are suitable to find differentially expressed exons in genome-wide scale. However, exon array produces massive datasets that are more than we can handle and analyze on personal computer. Results We have developed ExonMiner that is the first all-in-one web service for analysis of exon array data to detect transcripts that have significantly different splicing patterns in two cells, e.g. normal and cancer cells. ExonMiner can perform the following analyses: (1 data normalization, (2 statistical analysis based on two-way ANOVA, (3 finding transcripts with significantly different splice patterns, (4 efficient visualization based on heatmaps and barplots, and (5 meta-analysis to detect exon level biomarkers. We implemented ExonMiner on a supercomputer system in order to perform genome-wide analysis for more than 300,000 transcripts in exon array data, which has the potential to reveal the aberrant splice variations in cancer cells as exon level biomarkers. Conclusion ExonMiner is well suited for analysis of exon array data and does not require any installation of software except for internet browsers. What all users need to do is to access the ExonMiner URL Users can analyze full dataset of exon array data within hours by high-level statistical analysis with sound theoretical basis that finds aberrant splice variants as biomarkers.

  20. Carbon nanotube nanoelectrode arrays (United States)

    Ren, Zhifeng; Lin, Yuehe; Yantasee, Wassana; Liu, Guodong; Lu, Fang; Tu, Yi


    The present invention relates to microelectode arrays (MEAs), and more particularly to carbon nanotube nanoelectrode arrays (CNT-NEAs) for chemical and biological sensing, and methods of use. A nanoelectrode array includes a carbon nanotube material comprising an array of substantially linear carbon nanotubes each having a proximal end and a distal end, the proximal end of the carbon nanotubes are attached to a catalyst substrate material so as to form the array with a pre-determined site density, wherein the carbon nanotubes are aligned with respect to one another within the array; an electrically insulating layer on the surface of the carbon nanotube material, whereby the distal end of the carbon nanotubes extend beyond the electrically insulating layer; a second adhesive electrically insulating layer on the surface of the electrically insulating layer, whereby the distal end of the carbon nanotubes extend beyond the second adhesive electrically insulating layer; and a metal wire attached to the catalyst substrate material.

  1. Array Antenna Limitations

    CERN Document Server

    Jonsson, B L G; Hussain, N


    This letter defines a physical bound based array figure of merit that provides a tool to compare the performance of both single and multi-band array antennas with respect to return-loss, thickness of the array over the ground-plane, and scan-range. The result is based on a sum-rule result of Rozanov-type for linear polarization. For single-band antennas it extends an existing limit for a given fixed scan-angle to include the whole scan-range of the array, as well as the unit-cell structure in the bound. The letter ends with an investigation of the array figure of merit for some wideband and/or wide-scan antennas with linear polarization. We find arrays with a figure of merit >0.6 that empirically defines high-performance antennas with respect to this measure.

  2. Pacific Array (Transportable Broadband Ocean Floor Array) (United States)

    Kawakatsu, Hitoshi; Ekstrom, Goran; Evans, Rob; Forsyth, Don; Gaherty, Jim; Kennett, Brian; Montagner, Jean-Paul; Utada, Hisashi


    Based on recent developments on broadband ocean bottom seismometry, we propose a next generation large-scale array experiment in the ocean. Recent advances in ocean bottom broadband seismometry1, together with advances in the seismic analysis methodology, have enabled us to resolve the regional 1-D structure of the entire lithosphere/asthenosphere system, including seismic anisotropy (azimuthal, and hopefully radial), with deployments of ~15 broadband ocean bottom seismometers (BBOBSs). Having ~15 BBOBSs as an array unit for a 2-year deployment, and repeating such deployments in a leap-frog way or concurrently (an array of arrays) for a decade or so would enable us to cover a large portion of the Pacific basin. Such efforts, not only by giving regional constraints on the 1-D structure beneath Pacific ocean, but also by sharing waveform data for global scale waveform tomography, would drastically increase our knowledge of how plate tectonics works on this planet, as well as how it worked for the past 150 million years. International collaborations is essential: if three countries/institutions participate this endeavor together, Pacific Array may be accomplished within five-or-so years.

  3. Integrated avalanche photodiode arrays (United States)

    Harmon, Eric S.


    The present disclosure includes devices for detecting photons, including avalanche photon detectors, arrays of such detectors, and circuits including such arrays. In some aspects, the detectors and arrays include a virtual beveled edge mesa structure surrounded by resistive material damaged by ion implantation and having side wall profiles that taper inwardly towards the top of the mesa structures, or towards the direction from which the ion implantation occurred. Other aspects are directed to masking and multiple implantation and/or annealing steps. Furthermore, methods for fabricating and using such devices, circuits and arrays are disclosed.

  4. A Study of Flexible Composites for Expandable Space Structures (United States)

    Scotti, Stephen J.


    Payload volume for launch vehicles is a critical constraint that impacts spacecraft design. Deployment mechanisms, such as those used for solar arrays and antennas, are approaches that have successfully accommodated this constraint, however, providing pressurized volumes that can be packaged compactly at launch and expanded in space is still a challenge. One approach that has been under development for many years is to utilize softgoods - woven fabric for straps, cloth, and with appropriate coatings, bladders - to provide this expandable pressure vessel capability. The mechanics of woven structure is complicated by a response that is nonlinear and often nonrepeatable due to the discrete nature of the woven fiber architecture. This complexity reduces engineering confidence to reliably design and certify these structures, which increases costs due to increased requirements for system testing. The present study explores flexible composite materials systems as an alternative to the heritage softgoods approach. Materials were obtained from vendors who utilize flexible composites for non-aerospace products to determine some initial physical and mechanical properties of the materials. Uniaxial mechanical testing was performed to obtain the stress-strain response of the flexible composites and the failure behavior. A failure criterion was developed from the data, and a space habitat application was used to provide an estimate of the relative performance of flexible composites compared to the heritage softgoods approach. Initial results are promising with a 25% mass savings estimated for the flexible composite solution.

  5. Focal plane array with modular pixel array components for scalability

    Energy Technology Data Exchange (ETDEWEB)

    Kay, Randolph R; Campbell, David V; Shinde, Subhash L; Rienstra, Jeffrey L; Serkland, Darwin K; Holmes, Michael L


    A modular, scalable focal plane array is provided as an array of integrated circuit dice, wherein each die includes a given amount of modular pixel array circuitry. The array of dice effectively multiplies the amount of modular pixel array circuitry to produce a larger pixel array without increasing die size. Desired pixel pitch across the enlarged pixel array is preserved by forming die stacks with each pixel array circuitry die stacked on a separate die that contains the corresponding signal processing circuitry. Techniques for die stack interconnections and die stack placement are implemented to ensure that the desired pixel pitch is preserved across the enlarged pixel array.

  6. Analysis of VCSEL Array Module Using a Simple Microlens Array

    Institute of Scientific and Technical Information of China (English)

    Hen-Wai; Tsao; Shyh-Lin; Tsao


    A simple microlens array is designed between VCSEL array and fiber array for integration of array module. We increase the optical coupling efficiency from -32.057 dBm to -0.9054 dBm by using our designed microlens array.

  7. Analysis of VCSEL Array Module Using a Simple Microlens Array

    Institute of Scientific and Technical Information of China (English)

    Wen-Ming Cheng; Hen-Wai Tsao; Shyh-Lin Tsao


    A simple microlens array is designed between VCSEL array and fiber array for integration of array module. We increase the optical coupling efficiency from-32.057 dBm to-0.9054 dBm by using our designed microlens array.

  8. Confining caesium in expanded natural Perlite


    Rehspringer, Jean Luc; Balencie, J.; Vilminot, Serge; Burger, Didier; Boos, Anne; Estournès, Claude


    International audience; We present the potential use of expanded perlite, a metastable amorphous hydrated aluminum silicate, as a permanent medium for the long-term confinement of caesium. A simple loading by mixing an aqueous caesium nitrate solution and expanded perlite at 300K followed by thermal annealing leads to 96% sintering. The formation of pollucite, CsAlSi2O6, a naturally occurring mineral phase, appears as the crystalline phase embedded in a glassy phase. Leaching tests on the res...

  9. Solar array deployment mechanism (United States)

    Calassa, Mark C.; Kackley, Russell


    This paper describes a Solar Array Deployment Mechanism (SADM) used to deploy a rigid solar array panel on a commercial spacecraft. The application required a deployment mechanism design that was not only lightweight, but also could be produced and installed at the lowest possible cost. This paper covers design, test, and analysis of a mechanism that meets these requirements.

  10. Array for detecting microbes

    Energy Technology Data Exchange (ETDEWEB)

    Andersen, Gary L.; DeSantis, Todd D.


    The present embodiments relate to an array system for detecting and identifying biomolecules and organisms. More specifically, the present embodiments relate to an array system comprising a microarray configured to simultaneously detect a plurality of organisms in a sample at a high confidence level.

  11. Automated SNP Genotype Clustering Algorithm to Improve Data Completeness in High-Throughput SNP Genotyping Datasets from Custom Arrays

    Institute of Scientific and Technical Information of China (English)

    Edward; M.; Smith; Jack; Littrell; Michael; Olivier


    High-throughput SNP genotyping platforms use automated genotype calling algo- rithms to assign genotypes. While these algorithms work efficiently for individual platforms, they are not compatible with other platforms, and have individual biases that result in missed genotype calls. Here we present data on the use of a second complementary SNP genotype clustering algorithm. The algorithm was originally designed for individual fluorescent SNP genotyping assays, and has been opti- mized to permit the clustering of large datasets generated from custom-designed Affymetrix SNP panels. In an analysis of data from a 3K array genotyped on 1,560 samples, the additional analysis increased the overall number of genotypes by over 45,000, significantly improving the completeness of the experimental data. This analysis suggests that the use of multiple genotype calling algorithms may be ad- visable in high-throughput SNP genotyping experiments. The software is written in Perl and is available from the corresponding author.

  12. Photovoltaic array loss mechanisms (United States)

    Gonzalez, Charles


    Loss mechanisms which come into play when solar cell modules are mounted in arrays are identified. Losses can occur either from a reduction in the array electrical performance or with nonoptimal extraction of power from the array. Electrical performance degradation is caused by electrical mismatch, transmission losses from cell surface soiling and steep angle of reflectance, and electrical losses from field wiring resistance and the voltage drop across blocking diodes. The second type of loss, concerned with the operating points of the array, can involve nonoptimal load impedance and limiting the operating envelope of the array to specific ranges of voltage and current. Each of the loss mechanisms are discussed and average energy losses expected from soiling, steep reflectance angles and circuit losses are calculated.

  13. Microfabricated ion trap array (United States)

    Blain, Matthew G.; Fleming, James G.


    A microfabricated ion trap array, comprising a plurality of ion traps having an inner radius of order one micron, can be fabricated using surface micromachining techniques and materials known to the integrated circuits manufacturing and microelectromechanical systems industries. Micromachining methods enable batch fabrication, reduced manufacturing costs, dimensional and positional precision, and monolithic integration of massive arrays of ion traps with microscale ion generation and detection devices. Massive arraying enables the microscale ion traps to retain the resolution, sensitivity, and mass range advantages necessary for high chemical selectivity. The reduced electrode voltage enables integration of the microfabricated ion trap array with on-chip circuit-based rf operation and detection electronics (i.e., cell phone electronics). Therefore, the full performance advantages of the microfabricated ion trap array can be realized in truly field portable, handheld microanalysis systems.

  14. A Quantitative Tool for Producing DNA-Based Diagnostic Arrays

    Energy Technology Data Exchange (ETDEWEB)

    Tom J. Whitaker


    The purpose of this project was to develop a precise, quantitative method to analyze oligodeoxynucleotides (ODNs) on an array to enable a systematic approach to quality control issues affecting DNA microarrays. Two types of ODN's were tested; ODN's formed by photolithography and ODN's printed onto microarrays. Initial work in Phase I, performed in conjunction with Affymetrix, Inc. who has a patent on a photolithographic in situ technique for creating DNA arrays, was very promising but did seem to indicate that the atomization process was not complete. Soon after Phase II work was under way, Affymetrix had further developed fluorescent methods and indicated they were no longer interested in our resonance ionization technique. This was communicated to the program manager and it was decided that the project would continue and be focused on printed ODNs. The method being tested is called SIRIS, Sputter-Initiated Resonance Ionization Spectroscopy. SIRIS has been shown to be a highly sensitive, selective, and quantitative tool for atomic species. This project was aimed at determining if an ODN could be labeled in such a way that SIRIS could be used to measure the label and thus provide quantitative measurements of the ODN on an array. One of the largest problems in this study has been developing a method that allows us to know the amount of an ODN on a surface independent of the SIRIS measurement. Even though we could accurately determine the amount of ODN deposited on a surface, the amount that actually attached to the surface is very difficult to measure (hence the need for a quantitative tool). A double-labeling procedure was developed in which 33P and Pt were both used to label ODNs. The radioactive 33P could be measured by a proportional counter that maps the counts in one dimension. This gave a good measurement of the amount of ODN remaining on a surface after immobilization and washing. A second label, Pt, was attached to guanine nucleotides in the

  15. Expanded Schools: Developing Mindsets to Support Academic Success. Research Brief (United States)

    ExpandED Schools, 2014


    The national demonstration of ExpandED Schools, The After-School Corporation's (TASC) expanded learning model, was launched in 2011-12 in New York City, Baltimore, and New Orleans. The ExpandED Schools demonstration is being evaluated by Policy Studies Associates (PSA) and is rolling out at a time when there is heightened awareness among…

  16. Piezoelectric transducer array microspeaker

    KAUST Repository

    Carreno, Armando Arpys Arevalo


    In this paper we present the fabrication and characterization of a piezoelectric micro-speaker. The speaker is an array of micro-machined piezoelectric membranes, fabricated on silicon wafer using advanced micro-machining techniques. Each array contains 2n piezoelectric transducer membranes, where “n” is the bit number. Every element of the array has a circular shape structure. The membrane is made out four layers: 300nm of platinum for the bottom electrode, 250nm or lead zirconate titanate (PZT), a top electrode of 300nm and a structural layer of 50

  17. P systems with array objects and array rewriting rules

    Institute of Scientific and Technical Information of China (English)

    K.G. Subramanian; R. Saravanan; M. Geethalakshmi; P. Helen Chandra; M. Margenstern


    Array P systems were introduced by Pǎun Gh. which is linking the two areas of membrane computing and picture grammars. Puzzle grammars were introduced by us for generating connected picture arrays in the two-dimensional plane, motivated by the problem of tiling the plane. On the other hand, incorporating into arrays the developmental type of generation used in the well-known biologically motivated L systems, Siromoney and Siromoney proposed a very general rectangular array generating model, called extended controlled tabled L array system (ECTLAS). In this paper we introduce two variations of the array P system, called BPG array P system and parallel array P system. The former has in the regions array objects and basic puzzle grammar rules (BPG), which are a specific kind of puzzle grammar rules. In the latter, the regions have rectangular array objects and tables of context-free rules. We examine these two types of P systems for their array generative power.

  18. Comparative linkage analysis and visualization of high-density oligonucleotide SNP array data

    Directory of Open Access Journals (Sweden)

    Smith Richard JH


    Full Text Available Abstract Background The identification of disease-associated genes using single nucleotide polymorphisms (SNPs has been increasingly reported. In particular, the Affymetrix Mapping 10 K SNP microarray platform uses one PCR primer to amplify the DNA samples and determine the genotype of more than 10,000 SNPs in the human genome. This provides the opportunity for large scale, rapid and cost-effective genotyping assays for linkage analysis. However, the analysis of such datasets is nontrivial because of the large number of markers, and visualizing the linkage scores in the context of genome maps remains less automated using the current linkage analysis software packages. For example, the haplotyping results are commonly represented in the text format. Results Here we report the development of a novel software tool called CompareLinkage for automated formatting of the Affymetrix Mapping 10 K genotype data into the "Linkage" format and the subsequent analysis with multi-point linkage software programs such as Merlin and Allegro. The new software has the ability to visualize the results for all these programs in dChip in the context of genome annotations and cytoband information. In addition we implemented a variant of the Lander-Green algorithm in the dChipLinkage module of dChip software (V1.3 to perform parametric linkage analysis and haplotyping of SNP array data. These functions are integrated with the existing modules of dChip to visualize SNP genotype data together with LOD score curves. We have analyzed three families with recessive and dominant diseases using the new software programs and the comparison results are presented and discussed. Conclusions The CompareLinkage and dChipLinkage software packages are freely available. They provide the visualization tools for high-density oligonucleotide SNP array data, as well as the automated functions for formatting SNP array data for the linkage analysis programs Merlin and Allegro and calling

  19. Electrical Properties of Expanded Graphite Intercalation Compounds

    Institute of Scientific and Technical Information of China (English)


    The intercalation compounds of CuCl2 were synthesized with expanded graphite, whose magnitude of the electrical conductivity is about Their electrical conductivity is 3~6 times as high as that of the expanded graphite, and about 10 times as high as that of GIC made of the non-expanded graphite. The microanalysis results of chemical compounds by X-ray energy spectrum scanning of TEM testified that the atomic ratio of chloride and cupric is nonstoichoimetric. The multivalence and exchange of electrovalence of the cupric ion was confirmed by the XPS-ESCA. Vacancy of chlorine anion increases the concentration of charge carrier.The special stage structure, made of graphite and chloride, produces a weak chemical bond belt and provides a carrier space in the direction of GIC layer. These factors develop the electrical properties.

  20. Analog model for an expanding universe

    CERN Document Server

    Weinfurtner, S E C


    Over the last few years numerous papers concerning analog models for gravity have been published. It was shown that the dynamical equation of several systems (e.g. Bose-Einstein condensates with a sink or a vortex) have the same wave equation as light in a curved-space (e.g. black holes). In the last few months several papers were released which deal with simulations of the universe. In this article the de-Sitter universe will be compared with a freely expanding three-dimensional spherical Bose-Einstein condensate. Initially the condensate is in a harmonic trap, which suddenly will be switched off. At the same time a small perturbation will be injected in the center of the condensate cloud. The motion of the perturbation in the expanding condensate will be discussed, and after some transformations the similarity to an expanding universe will be shown.

  1. Bank Directors’ Perceptions of Expanded Auditor's Reports

    DEFF Research Database (Denmark)

    Boolaky, Pran Krishansing; Quick, Reiner


    of expanded audit reports, namely information on the assurance level, materiality levels and key audit matters (KAM), on bank director perceptions of the quality of the financial statements, the audit and the audit report, as well as on their credit approval decisions. We conduct an experiment involving......Subsequent to the financial crisis, standard setters developed suggestions for enhancing the audit function, in order to increase financial stability. One related idea is to expand the audit report disclosed to the public, to ensure that it is fit for purpose. This study investigates the impact...... a sample of 105 bank directors and use ANCOVA to determine the predictors of bank director perceptions and decisions. Our findings suggest that disclosing the assurance level has a significantly positive impact. In contrast, we cannot demonstrate a material effect of expanding the audit report to include...

  2. Bound systems in an expanding universe

    CERN Document Server

    Baker, G A


    The Schwarzchild solution insertion in an expanding universe, the so-called "Swiss cheese model," is shown to possess an extrinsic curvature miss-match. One consequence is that some trajectories are discontinuous functions of their initial conditions. An alternate metric is proposed which goes smoothly between the Schwarzchild exterior solution and the Friedmann-Lemaitre, expanding universe metric. It is further shown that the effects of the expansion on planetary motions in the solar system are too small to be currently observed for this alternate metric.

  3. Radiation damping in closed expanding universes (United States)

    Bernui, Armando

    The dynamics of a coupled model (harmonic oscillator-relativistic scalar field) in Conformal Robertson-Walker (k = +1) spacetimes is investigated. The exact radiation-reaction equation of the source-including the retarded radiation terms due to the closed space geometry - is obtained and analyzed. A suitable family of Lyapunov functions is constructed to show that, if the spacetime expands monotonely, then the source's energy damps. A numerical simulation of this equation for expanding Universes, with and without Future Event Horizon, is performed.

  4. Wankel engines as steam expanders: design considerations

    Energy Technology Data Exchange (ETDEWEB)

    Badr, O.; Naik, S.; O' Callaghan, P.W.; Probert, S.D. (Cranfield Inst. of Tech., Bedford (GB). Dept. of Applied Energy)


    Rotary Wankel engines offer several advantages compared with turbines and other positive-displacement machines as the expansion devices in low-power-output Rankine-cycle systems. So a Wankel expander was selected as the most appropriate device for a steam Rankine-engine, operating principally as a mini combined heat-and-power unit, providing a mechanical output of 5-20 kW. A computer-aided-design technique for selecting the optimal geometry and location of the ports of the expander is described: the computer programs are available from the authors. Lubrication and possible material combinations are also discussed. (author).

  5. Protein Functionalized Nanodiamond Arrays

    Directory of Open Access Journals (Sweden)

    Liu YL


    Full Text Available Abstract Various nanoscale elements are currently being explored for bio-applications, such as in bio-images, bio-detection, and bio-sensors. Among them, nanodiamonds possess remarkable features such as low bio-cytotoxicity, good optical property in fluorescent and Raman spectra, and good photostability for bio-applications. In this work, we devise techniques to position functionalized nanodiamonds on self-assembled monolayer (SAMs arrays adsorbed on silicon and ITO substrates surface using electron beam lithography techniques. The nanodiamond arrays were functionalized with lysozyme to target a certain biomolecule or protein specifically. The optical properties of the nanodiamond-protein complex arrays were characterized by a high throughput confocal microscope. The synthesized nanodiamond-lysozyme complex arrays were found to still retain their functionality in interacting with E. coli.

  6. Genome-wide analysis of neuroblastomas using high-density single nucleotide polymorphism arrays.

    Directory of Open Access Journals (Sweden)

    Rani E George

    Full Text Available BACKGROUND: Neuroblastomas are characterized by chromosomal alterations with biological and clinical significance. We analyzed paired blood and primary tumor samples from 22 children with high-risk neuroblastoma for loss of heterozygosity (LOH and DNA copy number change using the Affymetrix 10K single nucleotide polymorphism (SNP array. FINDINGS: Multiple areas of LOH and copy number gain were seen. The most commonly observed area of LOH was on chromosome arm 11q (15/22 samples; 68%. Chromosome 11q LOH was highly associated with occurrence of chromosome 3p LOH: 9 of the 15 samples with 11q LOH had concomitant 3p LOH (P = 0.016. Chromosome 1p LOH was seen in one-third of cases. LOH events on chromosomes 11q and 1p were generally accompanied by copy number loss, indicating hemizygous deletion within these regions. The one exception was on chromosome 11p, where LOH in all four cases was accompanied by normal copy number or diploidy, implying uniparental disomy. Gain of copy number was most frequently observed on chromosome arm 17q (21/22 samples; 95% and was associated with allelic imbalance in six samples. Amplification of MYCN was also noted, and also amplification of a second gene, ALK, in a single case. CONCLUSIONS: This analysis demonstrates the power of SNP arrays for high-resolution determination of LOH and DNA copy number change in neuroblastoma, a tumor in which specific allelic changes drive clinical outcome and selection of therapy.

  7. Expanded austenite, crystallography and residual stress

    DEFF Research Database (Denmark)

    Christiansen, Thomas; Hummelshøj, Thomas Strabo; Somers, Marcel A. J.


    compositions and (b) unravelling of the contributions of stress-depth and composition-depth profiles in expanded austenite layers are summarised and discussed. It is shown through simulation of line profiles that the combined effects of composition gradients, stress gradients and stacking fault gradients can...

  8. Expanded austenite; crystallography and residual stress

    DEFF Research Database (Denmark)

    Christiansen, Thomas; Hummelshøj, Thomas Strabo; Somers, Marcel A. J.


    The identity of expanded austenite as developing during low temperature nitriding and/or carburizing of austenitic stainless steel has been under debate since the very first observation of this phase. In the present article recent results obtained with i) homogeneous samples of various uniform...

  9. Properties of extruded expandable breadfruit products (United States)

    Dried breadfruit was extruded with a twin screw extruder to develop a value-added expanded fruit product. This research studied the effects of barrel temperature (120-160°C), moisture content (13-25%), feeding rate (13-25 kg/h) and screw speed (115-175rpm) on physicochemical properties (bulk densit...

  10. Expanding the applicability of Heallth Technology Assessments

    DEFF Research Database (Denmark)

    Draborg, Eva; Hansen, Helle Ploug


    The objective of the presentation is to expand the foundations of input into policy decision making relying on health technology assessments (HTA). HTAs are primarily based on systematic reviews (SR) and thereby mostly on randomized controlled trials (RCT). RCTs can be distinguished on a continuu...

  11. Expanding the collaboration between CERN and Pakistan

    CERN Multimedia


    Parvez Butt, chairman of the Pakistan Atomic Energy Commission, and CERN Director General, Luciano Maiani, signed a letter of intent last week to expand collaboration. Through an agreement which should be formalized within a few months, Pakistan would make a substantial contribution to the LHC and its detectors, coordinated by the Pakistani National Centre of Physics.

  12. Expanding Your Horizons Conference in Geneva

    CERN Multimedia

    Chromek-Burckhart, Doris


    CERN and its experiments participated in Expanding Your Horizons (EYH) in Science and Mathematics conference in Geneva on 12th November. EYH nurture girls' interest in science and math courses to encourage them to consider careers in science, technology, engineering, and math.

  13. Responsible implementation of expanded carrier screening (United States)

    Henneman, Lidewij; Borry, Pascal; Chokoshvili, Davit; Cornel, Martina C; van El, Carla G; Forzano, Francesca; Hall, Alison; Howard, Heidi C; Janssens, Sandra; Kayserili, Hülya; Lakeman, Phillis; Lucassen, Anneke; Metcalfe, Sylvia A; Vidmar, Lovro; de Wert, Guido; Dondorp, Wybo J; Peterlin, Borut


    This document of the European Society of Human Genetics contains recommendations regarding responsible implementation of expanded carrier screening. Carrier screening is defined here as the detection of carrier status of recessive diseases in couples or persons who do not have an a priori increased risk of being a carrier based on their or their partners' personal or family history. Expanded carrier screening offers carrier screening for multiple autosomal and X-linked recessive disorders, facilitated by new genetic testing technologies, and allows testing of individuals regardless of ancestry or geographic origin. Carrier screening aims to identify couples who have an increased risk of having an affected child in order to facilitate informed reproductive decision making. In previous decades, carrier screening was typically performed for one or few relatively common recessive disorders associated with significant morbidity, reduced life-expectancy and often because of a considerable higher carrier frequency in a specific population for certain diseases. New genetic testing technologies enable the expansion of screening to multiple conditions, genes or sequence variants. Expanded carrier screening panels that have been introduced to date have been advertised and offered to health care professionals and the public on a commercial basis. This document discusses the challenges that expanded carrier screening might pose in the context of the lessons learnt from decades of population-based carrier screening and in the context of existing screening criteria. It aims to contribute to the public and professional discussion and to arrive at better clinical and laboratory practice guidelines. PMID:26980105

  14. Expanding CTE Opportunities through Blended Learning (United States)

    McKinstry, Elizabeth


    The global economy, 21st century skills, knowledge society, college and career readiness, digital and project-based learning are all common terms to educators who are expanding their learning environments beyond the classroom to meet the needs of all students. It is common knowledge that the rapid technological advances of this century have…

  15. Expanding the Focus of Career Assessment. (United States)

    Lock, Jared D.; Hogan, Robert


    Issues affecting career assessment include change in the focus and definition of career, emphasis on quality of work life, expansion of career paths, increased amount of career information available on the Internet, and questionable quality of online assessment. An expanded model of career assessment now includes technical fit, personal fit,…

  16. Responsible implementation of expanded carrier screening. (United States)

    Henneman, Lidewij; Borry, Pascal; Chokoshvili, Davit; Cornel, Martina C; van El, Carla G; Forzano, Francesca; Hall, Alison; Howard, Heidi C; Janssens, Sandra; Kayserili, Hülya; Lakeman, Phillis; Lucassen, Anneke; Metcalfe, Sylvia A; Vidmar, Lovro; de Wert, Guido; Dondorp, Wybo J; Peterlin, Borut


    This document of the European Society of Human Genetics contains recommendations regarding responsible implementation of expanded carrier screening. Carrier screening is defined here as the detection of carrier status of recessive diseases in couples or persons who do not have an a priori increased risk of being a carrier based on their or their partners' personal or family history. Expanded carrier screening offers carrier screening for multiple autosomal and X-linked recessive disorders, facilitated by new genetic testing technologies, and allows testing of individuals regardless of ancestry or geographic origin. Carrier screening aims to identify couples who have an increased risk of having an affected child in order to facilitate informed reproductive decision making. In previous decades, carrier screening was typically performed for one or few relatively common recessive disorders associated with significant morbidity, reduced life-expectancy and often because of a considerable higher carrier frequency in a specific population for certain diseases. New genetic testing technologies enable the expansion of screening to multiple conditions, genes or sequence variants. Expanded carrier screening panels that have been introduced to date have been advertised and offered to health care professionals and the public on a commercial basis. This document discusses the challenges that expanded carrier screening might pose in the context of the lessons learnt from decades of population-based carrier screening and in the context of existing screening criteria. It aims to contribute to the public and professional discussion and to arrive at better clinical and laboratory practice guidelines.

  17. Heat expanded starch-based compositions. (United States)

    Glenn, Gregory M; Klamczynski, Artur K; Holtman, Kevin M; Shey, Justin; Chiou, Bor-Sen; Berrios, Jose; Wood, Delilah; Orts, William J; Imam, Syed H


    A heat expansion process similar to that used for expanded bead polystyrene was used to expand starch-based compositions. Foam beads made by solvent extraction had the appearance of polystyrene beads but did not expand when heated due to an open-cell structure. Nonporous beads, pellets, or particles were made by extrusion or by drying and milling cooked starch slurries. The samples expanded into a low-density foam by heating 190-210 degrees C for more than 20 s at ambient pressures. Formulations containing starch (50-85%), sorbitol (5-15%), glycerol (4-12%), ethylene vinyl alcohol (EVAL, 5-15%), and water (10-20%) were studied. The bulk density was negatively correlated to sorbitol, glycerol, and water content. Increasing the EVAL content increased the bulk density, especially at concentrations higher than 15%. Poly(vinyl alcohol) (PVAL) increased the bulk density more than EVAL. The bulk density was lowest in samples made of wheat and potato starch as compared to corn starch. The expansion temperature for the starch pellets decreased more than 20 degrees C as the moisture content was increased from 10 to 25%. The addition of EVAL in the formulations decreased the equilibrium moisture content of the foam and reduced the water absorption during a 1 h soaking period.

  18. Advantages of expanded universal carrier screening: what is at stake? (United States)

    van der Hout, Sanne; Holtkamp, Kim Ca; Henneman, Lidewij; de Wert, Guido; Dondorp, Wybo J


    Expanded universal carrier screening (EUCS) entails a twofold expansion of long-standing (preconception) carrier screening programmes: it not only allows the simultaneous screening of a large list of diseases ('expanded'), but also refers to a pan-ethnic screening offer ('universal'). Advocates mention three main moral advantages of EUCS as compared with traditional (targeted and/or ancestry-based) forms of carrier screening: EUCS will (1) maximise opportunities for autonomous reproductive choice by informing prospective parents about a much wider array of reproductive risks; (2) provide equity of access to carrier testing services; (3) reduce the risk of stigmatisation. This empirical ethics study aims to widen this account and provide a balanced picture of the potential pros and cons of EUCS. Semi-structured interviews were conducted with 17 health (policy) professionals and representatives of patient organisations about their views on carrier screening including a possible EUCS scenario. Stakeholders acknowledged the potential benefits of EUCS, but also expressed five main moral concerns: (1) Does EUCS respond to an urgent problem or population need? (2) Is it possible to offer couples both understandable and sufficient information about EUCS? (3) How will societal views on 'reproductive responsibility' change as a result of EUCS? (4) Will EUCS lead to a lower level of care for high-risk populations? (5) Will EUCS reinforce disability-based stigmatisation? While having the potential to overcome some moral limits inherent in traditional carrier screening, EUCS comes with moral challenges of its own. More research is needed to (further) anticipate the ethical and practical consequences of EUCS.

  19. Implementation of exon arrays: alternative splicing during T-cell proliferation as determined by whole genome analysis

    Directory of Open Access Journals (Sweden)

    Whistler Toni


    Full Text Available Abstract Background The contribution of alternative splicing and isoform expression to cellular response is emerging as an area of considerable interest, and the newly developed exon arrays allow for systematic study of these processes. We use this pilot study to report on the feasibility of exon array implementation looking to replace the 3' in vitro transcription expression arrays in our laboratory. One of the most widely studied models of cellular response is T-cell activation from exogenous stimulation. Microarray studies have contributed to our understanding of key pathways activated during T-cell stimulation. We use this system to examine whole genome transcription and alternate exon usage events that are regulated during lymphocyte proliferation in an attempt to evaluate the exon arrays. Results Peripheral blood mononuclear cells form healthy donors were activated using phytohemagglutinin, IL2 and ionomycin and harvested at 5 points over a 7 day period. Flow cytometry measured cell cycle events and the Affymetrix exon array platform was used to identify the gene expression and alternate exon usage changes. Gene expression changes were noted in a total of 2105 transcripts, and alternate exon usage identified in 472 transcript clusters. There was an overlap of 263 transcripts which showed both differential expression and alternate exon usage over time. Gene ontology enrichment analysis showed a broader range of biological changes in biological processes for the differentially expressed genes, which include cell cycle, cell division, cell proliferation, chromosome segregation, cell death, component organization and biogenesis and metabolic process ontologies. The alternate exon usage ontological enrichments are in metabolism and component organization and biogenesis. We focus on alternate exon usage changes in the transcripts of the spliceosome complex. The real-time PCR validation rates were 86% for transcript expression and 71% for

  20. Evaporating metal nanocrystal arrays (United States)

    Zhang, Xue; Joy, James C.; Zhao, Chenwei; Kim, Jin Ho; Fernandes, Gustavo; Xu, J. M.; Valles, James M., Jr.


    Anodic aluminum oxide (AAO) substrates with a self-ordered triangular array of nanopores provide the means to fabricate multiple forms of nano materials, such as nanowires and nanoparticles. This study focuses on nanostructures that emerge in thin films of metals thermally evaporated onto the surface of AAO. Previous work showed that films of different evaporated metals assume dramatically different structures, e.g. an ordered triangular array of nearly monodisperse nanoparticles forms for lead (Pb) while a polycrystalline nanohoneycomb structure forms for silver (Ag). Here, we present investigations of the effects of substrate temperature and deposition angle that reveal the processes controlling the nano particle array formation. Our findings indicate that arrays form provided the grain nucleation density exceeds the pore density and the atomic mobility is high enough to promote grain coalescence. They introduce a method for producing films with anisotropic grain array structure. The results provide insight into the influence of substrate nano-morphology on thin film growth energetics and kinetics that can be harnessed for creating films with other novel nano-structures.

  1. Wireless Josephson Junction Arrays (United States)

    Adams, Laura


    We report low temperature, microwave transmission measurements on a wireless two- dimensional network of Josephson junction arrays composed of superconductor-insulator -superconductor tunnel junctions. Unlike their biased counterparts, by removing all electrical contacts to the arrays and superfluous microwave components and interconnects in the transmission line, we observe new collective behavior in the transmission spectra. In particular we will show emergent behavior that systematically responds to changes in microwave power at fixed temperature. Likewise we will show the dynamic and collective response of the arrays while tuning the temperature at fixed microwave power. We discuss these spectra in terms of the Berezinskii-Kosterlitz-Thouless phase transition and Shapiro steps. We gratefully acknowledge the support Prof. Steven Anlage at the University of Maryland and Prof. Allen Goldman at the University of Minnesota. Physics and School of Engineering and Applied Sciences.

  2. Expanding advanced civilizations in the universe

    CERN Document Server

    Gros, C


    The 1950 lunch-table remark by Enrico Fermi `Where is everybody' has started intensive scientific and philosophical discussions about what we call nowadays the `Fermi paradox': If there had been ever a single advanced civilization in the cosmological history of our galaxy, dedicated to expansion, it would have had plenty of time to colonize the entire galaxy via exponential growth. No evidence of present or past alien visits to earth are known to us, leading to the standard conclusion that no advanced expanding civilization has ever existed in the milky-way \\cite{Webb}. This conclusion rest fundamentally on the ad-hoc assumption, that any alien civilizations dedicated to expansion at one time would remain dedicated to expansions forever. Considering our limited knowledge about alien civilizations we need however to relax this basic assumption. Here we show that a substantial and stable population of expanding advanced civilization might consequently exist in our galaxy.

  3. Parameter estimation for an expanding universe

    Directory of Open Access Journals (Sweden)

    Jieci Wang


    Full Text Available We study the parameter estimation for excitations of Dirac fields in the expanding Robertson–Walker universe. We employ quantum metrology techniques to demonstrate the possibility for high precision estimation for the volume rate of the expanding universe. We show that the optimal precision of the estimation depends sensitively on the dimensionless mass m˜ and dimensionless momentum k˜ of the Dirac particles. The optimal precision for the ratio estimation peaks at some finite dimensionless mass m˜ and momentum k˜. We find that the precision of the estimation can be improved by choosing the probe state as an eigenvector of the hamiltonian. This occurs because the largest quantum Fisher information is obtained by performing projective measurements implemented by the projectors onto the eigenvectors of specific probe states.

  4. Carbohydrate plasma expanders for passive tumor targeting

    DEFF Research Database (Denmark)

    Hoffmann, Stefan; Caysa, Henrike; Kuntsche, Judith


    The objective of this study was to investigate the suitability of carbohydrate plasma volume expanders as a novel polymer platform for tumor targeting. Many synthetic polymers have already been synthesized for targeted tumor therapy, but potential advantages of these carbohydrates include...... inexpensive synthesis, constant availability, a good safety profile, biodegradability and the long clinical use as plasma expanders. Three polymers have been tested for cytotoxicity and cytokine activation in cell cultures and conjugated with a near-infrared fluorescent dye: hydroxyethyl starches (HES 200 k......Da and HES 450 kDa) and dextran (DEX 500 kDa). Particle size and molecular weight distribution were determined by asymmetric flow field-flow fractionation (AF4). The biodistribution was investigated non-invasively in nude mice using multispectral optical imaging. The most promising polymer conjugate...

  5. The Submillimeter Array

    CERN Document Server

    Ho, P T P; Lo, K Y; Ho, Paul T.P.; Moran, James M.; Lo, Kwok Yung


    The Submillimeter Array (SMA), a collaborative project of the Smithsonian Astrophysical Observatory (SAO) and the Academia Sinica Institute of Astronomy and Astrophysics (ASIAA), has begun operation on Mauna Kea in Hawaii. A total of eight 6-m telescopes comprise the array, which will cover the frequency range of 180-900 GHz. All eight telescopes have been deployed and are operational. First scientific results utilizing the three receiver bands at 230, 345, and 690 GHz have been obtained and are presented in the accompanying papers.

  6. Photovoltaic array performance model.

    Energy Technology Data Exchange (ETDEWEB)

    Kratochvil, Jay A.; Boyson, William Earl; King, David L.


    This document summarizes the equations and applications associated with the photovoltaic array performance model developed at Sandia National Laboratories over the last twelve years. Electrical, thermal, and optical characteristics for photovoltaic modules are included in the model, and the model is designed to use hourly solar resource and meteorological data. The versatility and accuracy of the model has been validated for flat-plate modules (all technologies) and for concentrator modules, as well as for large arrays of modules. Applications include system design and sizing, 'translation' of field performance measurements to standard reporting conditions, system performance optimization, and real-time comparison of measured versus expected system performance.

  7. Selecting Sums in Arrays

    DEFF Research Database (Denmark)

    Brodal, Gerth Stølting; Jørgensen, Allan Grønlund


    In an array of n numbers each of the \\binomn2+nUnknown control sequence '\\binom' contiguous subarrays define a sum. In this paper we focus on algorithms for selecting and reporting maximal sums from an array of numbers. First, we consider the problem of reporting k subarrays inducing the k larges...... an algorithm with this running time and by proving a matching lower bound. Finally, we combine the ideas and obtain an O(n· max {1,log(k/n)}) time algorithm that selects a subarray storing the k’th largest sum among all subarrays of length at least l and at most u....

  8. Hubble, Hubble's law and the expanding universe


    Bagla, J. S.


    Hubble's name is associated closely with the idea of an expanding universe as he discovered the relation between the recession velocity and distances of galaxies. Hubble also did a lot of pioneering work on the distribution of galaxies in the universe. In this article we take a look at Hubble's law and discuss how it relates with models of the universe. We also give a historical perspective of the discoveries that led to the Hubble's law.

  9. Inextendibility of expanding cosmological models with symmetry

    Energy Technology Data Exchange (ETDEWEB)

    Dafermos, Mihalis [University of Cambridge, Department of Pure Mathematics and Mathematical Statistics, Wilberforce Road, Cambridge CB3 0WB (United Kingdom); Rendall, Alan D [Max Planck Institute for Gravitational Physics, Albert Einstein Institute, Am Muehlenberg 1, D-14476 Golm (Germany)


    A new criterion for inextendibility of expanding cosmological models with symmetry is presented. It is applied to derive a number of new results and to simplify the proofs of existing ones. In particular, it shows that the solutions of the Einstein-Vlasov system with T{sup 2} symmetry, including the vacuum solutions, are inextendible in the future. The technique introduced adds a qualitatively new element to the available tool-kit for studying strong cosmic censorship. (letter to the editor)

  10. Expander Graphs in Pure and Applied Mathematics


    Lubotzky, Alexander


    Expander graphs are highly connected sparse finite graphs. They play an important role in computer science as basic building blocks for network constructions, error correcting codes, algorithms and more. In recent years they have started to play an increasing role also in pure mathematics: number theory, group theory, geometry and more. This expository article describes their constructions and various applications in pure and applied mathematics.

  11. GWDC Expands High-End Market Share

    Institute of Scientific and Technical Information of China (English)


    @@ It is a decision of great significance for GWDC to expand high-end market share in order to realize its transformation of development strategy and improve its development quality. As an important step of GWDC to explore high-end market, Oman PDO Project marks the first time that the Chinese petroleum engineering service team cooperates with the transnational petroleum corporations ranking first three in the world.

  12. Cosmic strings in an expanding spacetime

    Energy Technology Data Exchange (ETDEWEB)

    Stein-Schabes, J.A.; Burd, A.B.


    We study string solutions in an expanding Friedmann-Robertson-Walker (FRW) spacetime. The back reaction of the string on the spacetime has been ignored so that the background stays Friedmannian throughout the evolution. By numerically integrating the field equations in both radiation- and matter-dominated eras, we discover some new oscillatory solutions. The possible damping of these oscillations is discussed. For late times the solution becomes identical to the static one.

  13. Strings, Fivebranes and an Expanding Universe



    It was recently shown that velocity-dependent forces between parallel fundamental strings moving apart in a $D-$dimensional spacetime implied an accelerating expanding universe in $D-1$-dimensional space-time. Exact solutions were obtained for the early time expansion in $D=5,6$. Here we show that this result also holds for fundamental strings in the background of a fivebrane, and argue that the feature of an accelerating universe would hold for more general $p$-brane-seeded models.

  14. Measurements of an expanding surface flashover plasma

    Energy Technology Data Exchange (ETDEWEB)

    Harris, J. R., E-mail: [Department of Electrical and Computer Engineering, Colorado State University, Fort Collins, Colorado 80523 (United States)


    A better understanding of vacuum surface flashover and the plasma produced by it is of importance for electron and ion sources, as well as advanced accelerators and other vacuum electronic devices. This article describes time-of-flight and biased-probe measurements made on the expanding plasma generated from a vacuum surface flashover discharge. The plasma expanded at velocities of 1.2–6.5 cm/μs, and had typical densities of 10{sup 10}–10{sup 12} cm{sup −3}. The expansion velocity of the plasma leading edge often exhibited a sharp increase at distances of about 50 mm from the discharge site. Comparison with biased-probe data suggests that, under most conditions, the plasma leading edge was dominated by negative ions, with the apparent increase in velocity being due to fast H{sup −} overtaking slower, heavier ions. In some cases, biased-probe data also showed abrupt discontinuities in the plasma energy distribution co-located with large changes in the intercepted plasma current, suggesting the presence of a shock in the leading edge of the expanding plasma.

  15. Optical cavity resonator in an expanding universe

    CERN Document Server

    Kopeikin, Sergei


    We study evolution of frequency of a standing electromagnetic (EM) wave in a resonant optical cavity placed to the expanding manifold described by the Robertson-Walker metric. One builds a local coordinate system in which spacetime is locally Minkowskian. However, due to the conformal nature of the Robertson-Walker metric the conventional transformation to the local inertial coordinates introduces ambiguity in the physical interpretation of the local time coordinate. Therefore, contrary to a common-sense expectation, a straightforward implementation of EEP alone does not allow us to decide whether atomic clocks ticks at the same rate as the clocks based on EM modes of a cavity. To resolve the ambiguity we analyzed the cavity rigidity and the oscillation of its EM modes in an expanding universe by employing the Maxwell equations. We found out that both the size of the cavity and the EM frequency experience an adiabatic drift in conformal coordinates as the universe expands. We set up the oscillation equation f...

  16. Lubricin in human breast tissue expander capsules. (United States)

    Cheriyan, Thomas; Guo, Lifei; Orgill, Dennis P; Padera, Robert F; Schmid, Thomas M; Spector, Myron


    Capsular contraction is the most common complication of breast reconstruction surgery. While presence of the contractile protein alpha smooth muscle actin (α-SMA) is considered among the causes of capsular contraction, the exact etiology and pathophysiology is not fully understood. The objective of this study was to investigate the possible role of lubricin in capsular formation and contraction by determining the presence and distribution of the lubricating protein lubricin in human breast tissue expander capsules. Related aims were to evaluate select histopathologic features of the capsules, and the percentage of cells expressing α-SMA, which reflects the myofibroblast phenotype. Capsules from tissue expanders were obtained from eight patients. Lubricin, at the tissue-implant interface, in the extracellular matrix, and in cells, and α-SMA-containing cells were evaluated immunohistochemically. The notable finding was that lubricin was identified in all tissue expander capsules: as a discrete layer at the tissue-implant interface, extracellular, and intracellular. There was a greater amount of lubricin in the extracellular matrix in the intimal-subintimal zone when compared with the tissue away from the implant. Varying degrees of synovial metaplasia were seen at the tissue-implant interface. α-SMA-containing cells were also seen in all but one patient. The findings might help us better understand factors involved in capsule formation.

  17. Inverted porphyrins and expanded porphyrins: An overview

    Indian Academy of Sciences (India)

    S K Pushpan; S Venkatraman; V G Anand; J Sankar; H Rath; T K Chandrashekar


    Porphyrins and metallopophyrins have attracted the attention of chemists for the past 100 years or more owing to their widespread involvement in biology. More recently, synthetic porphyrins and porphyrin-like macrocycles have attracted the attention of researchers due to their diverse applications as sensitizers for photodynamic therapy, MRI contrasting agents, and complexing agents for larger metal ions and also for their anion binding abilities. The number of -electrons in the porphyrin ring can be increased either by increasing the number of conjugated double bonds between the pyrrole rings or by increasing the number of heterocyclic rings. Thus, 22 sapphyrins, 26 rubyrins, 30 heptaphyrins, 34 octaphyrins and higher cyclic polypyrrole analogues containing 40, 48, 64, 80 and 96 systems have recently been reported in the literature. These macrocycles show rich structural diversity where normal and different kinds of inverted structures have been identified. In this review, an attempt has been made to collect the literature of the inverted porphyrins and expanded porphyrins reported until December 2001. Since the meso aryl expanded porphyrins have tendency to form both inverted and non-inverted structures more emphasis has been given to meso aryl expanded porphyrins.

  18. TRMM Solar Array Panels (United States)


    This final report presents conclusions/recommendations concerning the TRMM Solar Array; deliverable list and schedule summary; waivers and deviations; as-shipped performance data, including flight panel verification matrix, panel output detail, shadow test summary, humidity test summary, reverse bias test panel; and finally, quality assurance summary.

  19. TANGO Array.. 2. Simulations (United States)

    Bauleo, P.; Bonifazi, C.; Filevich, A.


    The angular and energy resolutions of the TANGO Array were obtained using extensive Monte Carlo simulations performed with a double purpose: (1) to determine the appropriate parameters for the array fitting to the desired range of sensitivity (the knee energy region), and (2) to construct a reliable shower database required for reference in the analysis of experimental data. The AIRES code, with the SIBYLL hadronic collision package, was used to simulate Extended Air Showers produced by primary cosmic rays (assuming protons and iron nuclei), with energies ranging from 10 14 to 10 18 eV. These data were fed into a realistic code which simulates the response of the detectors (water Cherenkov detectors), including the electronics, pickup noise, and the signal attenuation in the connecting cables. The trigger stage was considered in the simulations in order to estimate the trigger efficiency of the array and to verify the accuracy of the reconstruction codes. This paper delineates the simulations performed to obtain the expected behavior of the array, and describes the simulated data. The results of these simulations suggest that we can expect an error in the energy of the primary cosmic-ray of ˜60% of the estimated value and that the error in the measurement of the direction of arrival can be estimated as ˜4°. The present simulations also indicate that unambiguous assignments of the primary energy cannot be obtained because of the uncertainty in the nature of the primary cosmic ray.

  20. TANGO Array. 2. Simulations

    Energy Technology Data Exchange (ETDEWEB)

    Bauleo, P. E-mail:; Bonifazi, C.; Filevich, A


    The angular and energy resolutions of the TANGO Array were obtained using extensive Monte Carlo simulations performed with a double purpose: (1) to determine the appropriate parameters for the array fitting to the desired range of sensitivity (the knee energy region), and (2) to construct a reliable shower database required for reference in the analysis of experimental data. The AIRES code, with the SIBYLL hadronic collision package, was used to simulate Extended Air Showers produced by primary cosmic rays (assuming protons and iron nuclei), with energies ranging from 10{sup 14} to 10{sup 18} eV. These data were fed into a realistic code which simulates the response of the detectors (water Cherenkov detectors), including the electronics, pickup noise, and the signal attenuation in the connecting cables. The trigger stage was considered in the simulations in order to estimate the trigger efficiency of the array and to verify the accuracy of the reconstruction codes. This paper delineates the simulations performed to obtain the expected behavior of the array, and describes the simulated data. The results of these simulations suggest that we can expect an error in the energy of the primary cosmic-ray of {approx}60% of the estimated value and that the error in the measurement of the direction of arrival can be estimated as {approx}4 deg. . The present simulations also indicate that unambiguous assignments of the primary energy cannot be obtained because of the uncertainty in the nature of the primary cosmic ray.

  1. The Murchison Widefield Array

    NARCIS (Netherlands)

    Mitchell, Daniel A.; Greenhill, Lincoln J.; Ord, Stephen M.; Bernardi, Gianni


    It is shown that the excellent Murchison Radio-astronomy Observatory site allows the Murchison Widefield Array to employ a simple RFI blanking scheme and still calibrate visibilities and form images in the FM radio band. The techniques described are running autonomously in our calibration and imagin

  2. Array processors in chemistry

    Energy Technology Data Exchange (ETDEWEB)

    Ostlund, N.S.


    The field of attached scientific processors (''array processors'') is surveyed, and an attempt is made to indicate their present and possible future use in computational chemistry. The current commercial products from Floating Point Systems, Inc., Datawest Corporation, and CSP, Inc. are discussed.

  3. Bandwidth Reconfigurable Metamaterial Arrays

    Directory of Open Access Journals (Sweden)

    Nathanael J. Smith


    Full Text Available Metamaterial structures provide innovative ways to manipulate electromagnetic wave responses to realize new applications. This paper presents a conformal wideband metamaterial array that achieves as much as 10 : 1 continuous bandwidth. This was done by using interelement coupling to concurrently achieve significant wave slow-down and cancel the inductance stemming from the ground plane. The corresponding equivalent circuit of the resulting array is the same as that of classic metamaterial structures. In this paper, we present a wideband Marchand-type balun with validation measurements demonstrating the metamaterial (MTM array’s bandwidth from 280 MHz to 2800 MHz. Bandwidth reconfiguration of this class of array is then demonstrated achieving a variety of band-pass or band-rejection responses within its original bandwidth. In contrast with previous bandwidth and frequency response reconfigurations, our approach does not change the aperture’s or ground plane’s geometry, nor does it introduce external filtering structures. Instead, the new responses are realized by making simple circuit changes into the balanced feed integrated with the wideband MTM array. A variety of circuit changes can be employed using MEMS switches or variable lumped loads within the feed and 5 example band-pass and band-rejection responses are presented. These demonstrate the potential of the MTM array’s reconfiguration to address a variety of responses.

  4. Microelectronic Stimulator Array (United States)


    retinal prosthesis test device. Figure 3b shows an enlarged view of a nano-channel glass (NCG) electrode array. Figure 4 shows a conceptual layout (floor...against a visual cortex. 10 This involves invasive brain surgery through the cranium . From a surgical point of view, the intra ocular approach is

  5. A functional gene array for detection of bacterial virulence elements

    Energy Technology Data Exchange (ETDEWEB)

    Jaing, C


    We report our development of the first of a series of microarrays designed to detect pathogens with known mechanisms of virulence and antibiotic resistance. By targeting virulence gene families as well as genes unique to specific biothreat agents, these arrays will provide important data about the pathogenic potential and drug resistance profiles of unknown organisms in environmental samples. To validate our approach, we developed a first generation array targeting genes from Escherichia coli strains K12 and CFT073, Enterococcus faecalis and Staphylococcus aureus. We determined optimal probe design parameters for microorganism detection and discrimination, measured the required target concentration, and assessed tolerance for mismatches between probe and target sequences. Mismatch tolerance is a priority for this application, due to DNA sequence variability among members of gene families. Arrays were created using the NimbleGen Maskless Array Synthesizer at Lawrence Livermore National Laboratory. Purified genomic DNA from combinations of one or more of the four target organisms, pure cultures of four related organisms, and environmental aerosol samples with spiked-in genomic DNA were hybridized to the arrays. Based on the success of this prototype, we plan to design further arrays in this series, with the goal of detecting all known virulence and antibiotic resistance gene families in a greatly expanded set of organisms.

  6. Parallel signal identification pipeline based on Tiling Array data%一种Tiling Array信号识别流程的并行优化

    Institute of Scientific and Technical Information of China (English)

    余晓哲; 郎显宇; 陆忠华; 迟学斌


    针对一种非常有效的信号识别算法--滑窗法(sliding window,SW),在其嵌入的串行信号识别流程基础上提出并行处理方案,并基于MPI(message passing interface)平台实现并行优化版本.这在基因芯片研究领域是个崭新的思路.最后,根据公共数据Affymetrix(2005)Tiling Array,展示SW并行流程的运行性能.实验结果表明,信号识别流程的并行化对大规模的数据运算非常有效且十分必要.

  7. Lens array fabrication method with volume expansion property of PDMS (United States)

    Jang, WonJae; Kim, Junoh; Lee, Muyoung; Lee, Jooho; Bang, Yousung; Won, Yong Hyub


    Conventionally, poly (dimethylsiloxane) lens array is fabricated by replica molding. In this paper, we describe simple method for fabricating lens array with expanding property of PDMS. The PDMS substrate is prepared by spin coating on cleaned glass. After spin coating PDMS, substrate is treated with O2 plasma to promote adhesion between PDMS substrate and photoresist pattern on it. Positive photoresist az-4330 and AZ 430K developer is used for patterning on PDMS. General photolithography process is used to patterning. Then patterned PDMS substrate is dipped to 1- Bromododecane bath. During this process, patterned photoresist work as a barrier and prevent blocked PDMS substrate from reaction with 1-Bromododecane. Unblocked part of PDMS directly react with 1-Bromododecane and results in expanded PDMS volume. The expansion of PDMS is depends on absorbed 1-Bromododecane volume, dipping time and ratio of block to open area. The focal length of lens array is controlled by those PDMS expansion factors. Scale of patterned photoresist determine a diameter of each lens. The expansion occurs symmetrically at center of unblocked PDMS and 1-Bromododecane interface. As a result, the PDMS lens array is achieved by this process.

  8. Effect of support structure on CO2 adsorption properties of pore-expanded hyperbranched aminosilicas

    KAUST Repository

    Drese, Jeffrey H.


    Hyperbranched aminosilica (HAS) CO 2 adsorbents are prepared by the ring-opening polymerization of aziridine from SBA-15 mesoporous silica, as in the original synthesis of HAS materials, as well as over an array of new support materials with substantially larger average pore diameters to elucidate the effect of support porosity on final adsorbent properties. Pore-expanded hyperbranched aminosilica (PEHAS) CO 2 adsorbents are prepared from several different pore-expanded, ordered mesoporous silicas including pore-expanded SBA-15, mesocellular foam, and a large-pore commercial silica. The effect of the nature of the silica support is determined by examining the degree of aziridine polymerization and the CO 2 adsorption kinetics and capacities of the resulting organic/inorganic hybrid materials. Comparisons are made to non-pore-expanded SBA-15 based HAS adsorbents, reported previously, where pores become blocked at higher amine loadings. The PEHAS materials unexpectedly possess lower amine loadings than the previously reported HAS materials and do not exhibit pore blocking. The use of acetic acid as a catalyst during PEHAS synthesis only marginally increases amine loading. The adsorption kinetics of PEHAS adsorbents are similar to HAS adsorbents with low amine loadings and do not show the detrimental effects of pore-blocking. However, the inability to synthesize PEHAS adsorbents with high amine loadings via this approach limits the total amount of CO 2 captured per gram of material, compared to HAS adsorbents with high amine loadings. © 2011 Elsevier Inc. All rights reserved.

  9. Expanded mode lasers for telecommunications applications (United States)

    Lealman, Ian F.

    This thesis describes the development of a long wavelength (1.55 μm) expanded mode semiconductor laser. The increased spot size of the laser improves both the coupling efficiency to cleaved fibre and fibre alignment tolerances and reduces packaging cost. In this type of device the strength of the waveguide is gradually reduced towards the front facet allowing the mode to adiabatically expand so that the laser mode is better matched in size to that of a cleaved fibre. This can be achieved by either reducing the refractive index of the guide or reducing the amount of material in the core. The structure chosen was a buried heterostructure laser that utilised a twin guide consisting of an upper higher refractive index guide (the active region of the laser) above a weak passive guide. The width of the active region was reduced along part of the device allowing the mode to expand into the weak underlying guide. The guide structure was optimised using a variable grid finite difference mode solver, and the taper length calculated by an approximation to Love's method. Detailed results are presented for the measured light-current characteristic, farfield and coupling loss to cleaved fibre. These coupling losses were compared to the calculated data thus allowing the waveguide design to be optimised. Several iterations in the design of the device were undertaken, with the aim of reducing the coupling loss to cleaved single mode fibre without significantly compromising the laser performance. The final device design had extremely low coupling losses as low as 1.2 dB to cleaved fibre. Finally, the positive impact this device had on passive alignment using a silicon motherboard is examined, and the application this technology to a range of other optoelectronic components is discussed.

  10. Expanding Slayer Statutes to Elder Abuse. (United States)

    Piel, Jennifer


    Common law has a dictum that people must not benefit from their crimes. In years past, states have enacted slayer rules to prevent killers from inheriting from their victims. The specific criteria and applicability of slayer rules vary by jurisdiction. Recently, several states, including Washington, have expanded their slayer rules to disqualify persons from inheriting if they have been involved in abuse or financial exploitation of the deceased. Reviewed herein are the abuse disinheritance laws, the relationship of the laws to concepts of testamentary capacity and undue influence, and the relevance to forensic psychiatric evaluations.

  11. Sinopec Strives to Expand Domestic Market

    Institute of Scientific and Technical Information of China (English)

    Zhang Yan


    @@ China Petrochemical Corporation (Sinopec) strives to expand its domestic market share during the Tenth Five-Year Plan period (2001~2005). The assets of Sinopec totaled 536.3 billion yuan at the end of 2000 while the business income reached 375.4billion yuan. Sinopec produced 37.24 million tons of crude oil and 3.916 billion cubic meters of natural gas and processed 105.47million tons of crude and 2.165million tons of ethylene in 2000.

  12. Concurrent Manipulation of Expanded AVL Trees

    Institute of Scientific and Technical Information of China (English)

    章寅; 许卓群


    The concurrent manipulation of an expanded AVL tree(EAVL tree)s considered in this paper.The presented system can support any number of concurrent processes which perform searching,insertion and deletion on the tree.Simulation results indicate the high performance of the system.Elaborate techniques are used to achieve such a system unavailable based on any known algorithms.Methods developed in this paper may provide new insights into other problems in the area of concurrent search structure manipulation.

  13. Radar techniques using array antennas

    CERN Document Server

    Wirth, Wulf-Dieter


    Radar Techniques Using Array Antennas is a thorough introduction to the possibilities of radar technology based on electronic steerable and active array antennas. Topics covered include array signal processing, array calibration, adaptive digital beamforming, adaptive monopulse, superresolution, pulse compression, sequential detection, target detection with long pulse series, space-time adaptive processing (STAP), moving target detection using synthetic aperture radar (SAR), target imaging, energy management and system parameter relations. The discussed methods are confirmed by simulation stud

  14. Timed arrays wideband and time varying antenna arrays

    CERN Document Server

    Haupt, Randy L


    Introduces timed arrays and design approaches to meet the new high performance standards The author concentrates on any aspect of an antenna array that must be viewed from a time perspective. The first chapters briefly introduce antenna arrays and explain the difference between phased and timed arrays. Since timed arrays are designed for realistic time-varying signals and scenarios, the book also reviews wideband signals, baseband and passband RF signals, polarization and signal bandwidth. Other topics covered include time domain, mutual coupling, wideband elements, and dispersion. The auth

  15. Familiarity expands space and contracts time. (United States)

    Jafarpour, Anna; Spiers, Hugo


    When humans draw maps, or make judgments about travel-time, their responses are rarely accurate and are often systematically distorted. Distortion effects on estimating time to arrival and the scale of sketch-maps reveal the nature of mental representation of time and space. Inspired by data from rodent entorhinal grid cells, we predicted that familiarity to an environment would distort representations of the space by expanding the size of it. We also hypothesized that travel-time estimation would be distorted in the same direction as space-size, if time and space rely on the same cognitive map. We asked international students, who had lived at a college in London for 9 months, to sketch a south-up map of their college district, estimate travel-time to destinations within the area, and mark their everyday walking routes. We found that while estimates for sketched space were expanded with familiarity, estimates of the time to travel through the space were contracted with familiarity. Thus, we found dissociable responses to familiarity in representations of time and space. © 2016 The Authors Hippocampus Published by Wiley Periodicals, Inc.

  16. Historical Notes on the Expanding Universe (United States)

    Way, Michael J.; Belenkyi, Ari; Nussbaumer, Harry; Peacock, John


    The article Measuring the Hubble constant by Mario Livio and Adam Riess (Physics Today, October 2013, page 41) reviewed studies of the expanding universe from the 1920s to the present. Although the history of the subject underwent considerable compression to fit the length of a magazine article, we think it may leave a misleading impression of some of the key steps to our current understanding. We therefore offer the following clarifications. Most significantly, papers by Arthur Eddington and by Willem de Sitter in 1930, who successfully promoted Georges Lematres 1927 article for the Scientific Society of Brussels, effected a paradigm shift in interpretation of extragalactic redshifts in 1930. Before then, the astronomical community was generally unaware of the existence of nonstatic cosmological solutions and did not broadly appreciate that redshifts could be thought of locally as Doppler shifts in an expanding matter distribution. Certainly, in 1929 Edwin Hubble referred only to the de Sitter solution of 1917. At the time, the relation between distance and redshift predicted in that model was generally seen purely as a manifestation of static spacetime curvature.

  17. Unintended Consequences of Expanding the Genetic Alphabet. (United States)

    Pollum, Marvin; Ashwood, Brennan; Jockusch, Steffen; Lam, Minh; Crespo-Hernández, Carlos E


    The base pair d5SICS·dNaM was recently reported to incorporate and replicate in the DNA of a modified strain of Escherichia coli, thus making the world's first stable semisynthetic organism. This newly expanded genetic alphabet may allow organisms to store considerably more information in order to translate proteins with unprecedented enzymatic activities. Importantly, however, there is currently no knowledge of the photochemical properties of d5SICS or dNaM-properties that are central to the chemical integrity of cellular DNA. In this contribution, it is shown that excitation of d5SICS or dNaM with near-visible light leads to efficient trapping of population in the nucleoside's excited triplet state in high yield. Photoactivation of these long-lived, reactive states is shown to photosensitize cells, leading to the generation of reactive oxygen species and to a marked decrease in cell proliferation, thus warning scientists of the potential phototoxic side effects of expanding the genetic alphabet.

  18. Expanding ester biosynthesis in Escherichia coli. (United States)

    Rodriguez, Gabriel M; Tashiro, Yohei; Atsumi, Shota


    To expand the capabilities of whole-cell biocatalysis, we have engineered Escherichia coli to produce various esters. The alcohol O-acyltransferase (ATF) class of enzyme uses acyl-CoA units for ester formation. The release of free CoA upon esterification with an alcohol provides the free energy to facilitate ester formation. The diversity of CoA molecules found in nature in combination with various alcohol biosynthetic pathways allows for the biosynthesis of a multitude of esters. Small to medium volatile esters have extensive applications in the flavor, fragrance, cosmetic, solvent, paint and coating industries. The present work enables the production of these compounds by designing several ester pathways in E. coli. The engineered pathways generated acetate esters of ethyl, propyl, isobutyl, 2-methyl-1-butyl, 3-methyl-1-butyl and 2-phenylethyl alcohols. In particular, we achieved high-level production of isobutyl acetate from glucose (17.2 g l(-1)). This strategy was expanded to realize pathways for tetradecyl acetate and several isobutyrate esters.

  19. "Phase freezeout" in isentropically expanding matter

    CERN Document Server

    Iosilevskiy, Igor


    Features of isentropic expansion of warm dense matter (WDM) created by intense energy fluxes (strong shock compression or instant isochoric heating by laser or heavy ions) are under discussion in situation when ($i$) -- thermodynamic trajectory of such expansion crosses binodal of liquid-gas phase transition, and ($ii$) -- expansion within the two-phase region is going along equilibrium branch (not metastable one) of the two-phase mixture isentrope. It is known in the plane case that because of break in the expansion isentrope at binodal point (in $P-V$ plane) i.e. jump of sound velocity in this point, there appears extended zone ("boiling layer") of uniformity in expanding material with constant thermodynamic and kinematic parameters. It corresponds just to the state on this binodal of boiling liquid. The point is that because of self-similarity of such expansion (in plane case) this boiling layer contains finite and fixed part of whole expanding material. This property makes it possible (at least formally) ...

  20. Atacama Compact Array Antennas

    CERN Document Server

    Saito, Masao; Nakanishi, Kouichiro; Naoi, Takahiro; Yamada, Masumi; Saito, Hiro; Ikenoue, Bungo; Kato, Yoshihiro; Morita, Kou-ichiro; Mizuno, Norikazu; Iguchi, Satoru


    We report major performance test results of the Atacama Compact Array (ACA) 7-m and 12-m antennas of ALMA (Atacama Large Millimeter/submillimeter Array). The four major performances of the ACA antennas are all-sky pointing (to be not more than 2.0 arcsec), offset pointing (to be < 0.6 arcsec) surface accuracy (< 25(20) micrometer for 12(7)m-antenna), stability of path-length (15 micrometer over 3 min), and high servo capability (6 degrees/s for Azimuth and 3 degrees/s for Elevation). The high performance of the ACA antenna has been extensively evaluated at the Site Erection Facility area at an altitude of about 2900 meters. Test results of pointing performance, surface performance, and fast motion capability are demonstrated.

  1. Pulsar Timing Arrays


    Joshi, Bhal Chandra


    In the last decade, the use of an ensemble of radio pulsars to constrain the characteristic strain caused by a stochastic gravitational wave background has advanced the cause of detection of very low frequency gravitational waves significantly. This electromagnetic means of gravitational wave detection, called Pulsar Timing Array(PTA), is reviewed in this article. The principle of operation of PTA, the current operating PTAs and their status is presented along-with a discussion of the main ch...

  2. Photovoltaic cell array (United States)

    Eliason, J. T. (Inventor)


    A photovoltaic cell array consisting of parallel columns of silicon filaments is described. Each fiber is doped to produce an inner region of one polarity type and an outer region of an opposite polarity type to thereby form a continuous radial semi conductor junction. Spaced rows of electrical contacts alternately connect to the inner and outer regions to provide a plurality of electrical outputs which may be combined in parallel or in series.

  3. The Cherenkov Telescope Array (United States)

    Connaughton, Valerie


    The Cherenkov Telescope Array (CTA) is a large collaborative effort dedicated to the design and operation of the next-generation ground-based very high-energy gamma-ray observatory. CTA will improve by about one order of magnitude the sensitivity with respect to the current major arrays (VERITAS, H.E.S.S., and MAGIC) in the core energy range of 100 GeV to 10 TeV, and will extend the viability of the imaging atmospheric Cherenkov technique (IACT) down to tens of GeV and above 100 TeV. In order to achieve such improved performance at both a northern and southern CTA site, four 23m diameter Large Size Telescopes (LST) optimized for low energy gamma rays will be deployed close to the centre of the array. A larger number of Medium Size Telescopes (MST) will be optimized for the core IACT energy range. The southern site will include 25 12m single-mirror MSTs and a US contribution of up to 24 novel dual-mirror design Schwarzschild-Couder (SC) type MSTs with a primary mirror of 9.5m diameter, and will also include an array of Small Size Telescopes (SST) to observe the highest-energy gamma rays from galactic sources. The SSTs can be smaller and more widely separated because more energetic gamma rays produce a larger Cherenkov light pool with many photons. The SSTs achieve a large collection area by covering a wide (10 sq km) footprint on the ground. The CTA project is finishing its preparatory phase, and the pre-production phase will start this year. I will review the status and the expected performance of CTA as well as the main scientific goals for the observatory.

  4. YBCO Josephson Junction Arrays (United States)


    40, 489 (1961). [8] W. H. Press, B. P. Flannery, S. A. Teukolsky and W. T. Vetterling, Numerical recipes: the art of scientific computing (Cambridge...has recently become a commercial product. He has developed processes for depositing state-of-the art YBCO films on buffered sapphire substrates. can most improve and on what subsystems would benefit most from the pt.. .imance available from these arrays. Aqppoved f or publicO re󈧎OSI AIR

  5. Solar collector array

    Energy Technology Data Exchange (ETDEWEB)

    Hall, John Champlin; Martins, Guy Lawrence


    A method and apparatus for efficient manufacture, assembly and production of solar energy. In one aspect, the apparatus may include a number of modular solar receiver assemblies that may be separately manufactured, assembled and individually inserted into a solar collector array housing shaped to receive a plurality of solar receivers. The housing may include optical elements for focusing light onto the individual receivers, and a circuit for electrically connecting the solar receivers.

  6. The TALE Infill Array (United States)

    Bergman, Douglas


    The TALE Infill Array in conjunction with the TALE Tower Detector will provide hybrid coverage of the cosmic ray energy spectrum down to 3x10^16 eV. It will consist of about 100, two square meter scintillators on the surface spaced at 400 m; and 24 buried twelve square meter scintillators. The combination of surface and underground detectors will allow for the determination of the muon content of showers and thus give a handle on cosmic ray composition.

  7. TANGO ARRAY II: Simulations (United States)

    Bauleo, P.; Bonifazi, C.; Filevich, A.

    The angular and energy resolution of the TANGO Array has been obtained using Monte Carlo simulations. The AIRES code, with the SYBILL hadronic collision package, was used to simulate Extended Air Showers produced by primary cosmic rays (protons and iron nuclei), with energies ranging from 1014 eV to 1018 eV. These data were fed into a realistic code which simulates the response of the detector stations (water ˇCerenkov detectors), including the electronics, pick up noise, and the signal attenuation in the connecting cabling. The trigger stage is taken into account in order to produce estimates of the trigger efficiency of the array and to check the accuracy of the reconstruction codes. This paper describes the simulations performed to obtain the expected behavior of the array, and presents the simulated data. These simulations indicate that the accuracy of the cosmic ray primary energy determination is expected to be ˜ 60 % and the precision in the measurement of the direction of arrival can be estimated as ˜ 4 degrees.

  8. Spaceborne Processor Array (United States)

    Chow, Edward T.; Schatzel, Donald V.; Whitaker, William D.; Sterling, Thomas


    A Spaceborne Processor Array in Multifunctional Structure (SPAMS) can lower the total mass of the electronic and structural overhead of spacecraft, resulting in reduced launch costs, while increasing the science return through dynamic onboard computing. SPAMS integrates the multifunctional structure (MFS) and the Gilgamesh Memory, Intelligence, and Network Device (MIND) multi-core in-memory computer architecture into a single-system super-architecture. This transforms every inch of a spacecraft into a sharable, interconnected, smart computing element to increase computing performance while simultaneously reducing mass. The MIND in-memory architecture provides a foundation for high-performance, low-power, and fault-tolerant computing. The MIND chip has an internal structure that includes memory, processing, and communication functionality. The Gilgamesh is a scalable system comprising multiple MIND chips interconnected to operate as a single, tightly coupled, parallel computer. The array of MIND components shares a global, virtual name space for program variables and tasks that are allocated at run time to the distributed physical memory and processing resources. Individual processor- memory nodes can be activated or powered down at run time to provide active power management and to configure around faults. A SPAMS system is comprised of a distributed Gilgamesh array built into MFS, interfaces into instrument and communication subsystems, a mass storage interface, and a radiation-hardened flight computer.

  9. Mir Cooperative Solar Array (United States)

    Skor, Mike; Hoffman, Dave J.


    The Mir Cooperative Solar Array (MCSA), produced jointly by the United States and Russia, was deployed on the Mir Russian space station on May 25, 1996. The MCSA is a photovoltaic electrical power system that can generate up to 6 kW. The power from the MCSA is needed to extend Mir's lifetime and to support experiments conducted there by visiting U.S. astronauts. The MCSA was brought to Mir via the Space Shuttle Atlantis on the STS-74 mission, launched November 12, 1995. This cooperative venture combined the best technology of both countries: the United States provided high-efficiency, lightweight photovoltaic panel modules, whereas Russia provided the array structure and deployment mechanism. Technology developed in the Space Station Freedom Program, and now being used in the International Space Station, was used to develop MCSA's photovoltaic panel. Performance data obtained from MCSA operation on Mir will help engineers better understand the performance of the photovoltaic panel modules in orbit. This information will be used to more accurately predict the performance of the International Space Station solar arrays. Managed by the NASA Lewis Research Center for NASA's International Space Station Program Office in Houston, Texas, the MCSA Project was completed on time and under budget despite a very aggressive schedule.

  10. Mixed Frequency Ultrasound Phased Array

    Institute of Scientific and Technical Information of China (English)

    香勇; 霍健; 施克仁; 陈以方


    A mixed frequency ultrasonic phased array (MPA) was developed to improve the focus, in which the element excitation frequencies are not all the same as in a normal constant frequency phased array. A theoretical model of the mixed frequency phased array based on the interference principle was used to simulate the array's sound distribution. The pressure intensity in the array focal area was enhanced and the scanning area having effective contrast resolution was enlarged. The system is especially useful for high intensity focused ultrasound (HIFU) with more powerful energy and ultrasound imaging diagnostics with improved signal to noise ratios, improved beam forming and more uniform imaging quality.

  11. Optical cavity resonator in an expanding universe (United States)

    Kopeikin, Sergei M.


    We study the cosmological evolution of frequency of a standing electromagnetic wave in a resonant optical cavity placed to the expanding manifold described by the Robertson-Walker metric. Because of the Einstein principle of equivalence (EEP), one can find a local coordinate system (a local freely falling frame), in which spacetime is locally Minkowskian. However, due to the conformal nature of the Robertson-Walker metric the conventional transformation to the local inertial coordinates introduces ambiguity in the physical interpretation of the local time coordinate, . Therefore, contrary to a common-sense expectation, a straightforward implementation of EEP alone does not allow us to unambiguously decide whether atomic clocks based on quantum transitions of atoms, ticks at the same rate as the clocks based on electromagnetic modes of a cavity. To resolve this ambiguity we have to analyse the cavity rigidity and the oscillation of its electromagnetic modes in an expanding universe by employing the full machinery of the Maxwell equations irrespectively of the underlying theory of gravity. We proceed in this way and found out that the size of the cavity and the electromagnetic frequency experience an adiabatic drift in conformal (unphysical) coordinates as the universe expands in accordance with the Hubble law. We set up the oscillation equation for the resonant electromagnetic modes, solve it by the WKB approximation, and reduce the coordinate-dependent quantities to their counterparts measured by a local observer who counts time with atomic clock. The solution shows that there is a perfect mutual cancellation of the adiabatic drift of cavity's frequency by space transformation to local coordinates and the time counted by the clocks based on electromagnetic modes of cavity has the same rate as that of atomic clocks. We conclude that if general relativity is correct and the local expansion of space is isotropic there should be no cosmological drift of frequency of a

  12. The Expanding Marketplace for Applied Geophysics (United States)

    Carlson, N.; Sirles, P.


    While the image of geophysics for the proverbial "layman" often seems limited to volcanoes and earthquakes, and to the geoscientist this image enlarges to include oil or minerals exploration and whole earth studies, there has been a steady increase in the application of geophysics into the realm of "daily life", such as real estate deals, highway infrastructure, and flood protection. This expansion of applications can be attributed to the improved economics from advances in equipment and interpretation. Traditional geophysical methods that at one time often only fit within the budgets of oil, gas, and minerals exploration programs can now be economically applied to much smaller scale needs like contaminant mapping, landfill delineation, and levee investigations. A real-world, economic example of this expanding marketplace is our company, which began very small and was aimed almost exclusively at the minerals exploration market. Most of our growth has been in the last 10 years, when we have expanded to five offices and a staff with almost 40 geoscientist degrees (21 in geophysics); much of this growth has been in the non-oil, non-minerals arenas. While much of our work still includes minerals exploration, other projects this year include wind-farm foundation studies, cavity detection above underground nuclear tests, landfill studies, acid mine drainage problems, and leaks in evaporation ponds. A methodology example of this expanding market is the induced polarization (IP) survey, once primarily used for minerals exploration, particularly large porphyry copper deposits, but now efficient enough to also use in environmental studies. The IP method has been particularly useful in delineating and characterizing old, poorly documented landfills, and recent research suggests it may also be useful in monitoring the accelerated biodegradation processes used in some cases to rehabilitate the sites. Compared to temperature monitoring systems, IP may be more useful in providing

  13. Yaglom law in the expanding solar wind

    CERN Document Server

    Gogoberidze, G; Carbone, V


    We study the Yaglom law, which relates the mixed third order structure function to the average dissipation rate of turbulence, in a uniformly expanding solar wind by using the two scales expansion model of magnetohydrodynamic (MHD) turbulence. We show that due to the expansion of the solar wind two new terms appear in the Yaglom law. The first term is related to the decay of the turbulent energy by nonlinear interactions, whereas the second term is related to the non-zero cross-correlation of the Els\\"asser fields. Using magnetic field and plasma data from WIND and Helios 2 spacecrafts, we show that at lower frequencies in the inertial range of MHD turbulence the new terms become comparable to Yaglom's third order mixed moment, and therefore they cannot be neglected in the evaluation of the energy cascade rate in the solar wind.

  14. Expanding Technological Frames Towards Mediated Collaboration

    DEFF Research Database (Denmark)

    Bjørn, Pernille; Scupola, Ada; Fitzgerald, Brian


    This paper provides an in-depth analysis of technological and social factors leading to the successful adoption of groupware in a virtual team in educational setting. Drawing on a theoretical framework based on the concept of technological frames, we conducted an action research study to analyze...... the chronological sequence of events leading to groupware adoption. We argue that groupware adoption can be conceptualized as a three-step process of expanding and aligning individual technological frames towards groupware: The first step comprises activities facilitating participants in articulation and evaluation...... of their work practices and use of technology. Finally the third step includes participants' commitment and practical enactment of groupware. One of the key findings is that in groupware adoption the alignment of the individual technological frames requires articulation and re-evaluation of experienced...

  15. Expanding forensic science through forensic intelligence. (United States)

    Ribaux, Olivier; Talbot Wright, Benjamin


    Research and Development ('R&D') in forensic science currently focuses on innovative technologies improving the efficiency of existing forensic processes, from the detection of marks and traces at the scene, to their presentation in Court. R&D approached from this perspective provides no response to doubts raised by recent criminological studies, which question the effective contribution of forensic science to crime reduction, and to policing in general. Traces (i.e. forensic case data), as remnants of criminal activity are collected and used in various forms of crime monitoring and investigation. The aforementioned doubts therefore need to be addressed by expressing how information is conveyed by traces in these processes. Modelling from this standpoint expands the scope of forensic science and provides new R&D opportunities. Twelve propositions for R&D are stated in order to pave the way.

  16. Rubella Seroprevalence Before Expanded Vaccination Program

    Directory of Open Access Journals (Sweden)

    Kenan Sener


    Full Text Available Altough rubella is usually a mild childhood disease, but when it occurs early in pregnancy are severe. In this study, seroprevalence of rubella antibodies have been invastegated in various age groups especially chilbearing age’s women before Expanded Vaccination Programme. IgM and IgG antibodies against rubella were tested by ELISA kits. Seropositivity of rubella IgG was 89,5% in chlidbearing age’s women. In Turkey, the vaccine has been on the market since 1989 but rubella vaccination is currently included in the national immunization programme. Hence, our results are important for comparison of the seroprevalence rates after national vaccination program. [TAF Prev Med Bull 2007; 6(5.000: 371-374

  17. Rubella Seroprevalence Before Expanded Vaccination Program

    Directory of Open Access Journals (Sweden)

    Kenan Sener


    Full Text Available Altough rubella is usually a mild childhood disease, but when it occurs early in pregnancy are severe. In this study, seroprevalence of rubella antibodies have been invastegated in various age groups especially chilbearing age’s women before Expanded Vaccination Programme. IgM and IgG antibodies against rubella were tested by ELISA kits. Seropositivity of rubella IgG was 89,5% in chlidbearing age’s women. In Turkey, the vaccine has been on the market since 1989 but rubella vaccination is currently included in the national immunization programme. Hence, our results are important for comparison of the seroprevalence rates after national vaccination program. [TAF Prev Med Bull. 2007; 6(5: 371-374

  18. Particles formation in an expanding plasma

    Energy Technology Data Exchange (ETDEWEB)

    Lescoute, E.; Hallo, L.; Chimier, B.; Tikhonchuk, V.T.; Stenz, C. [Bordeaux-1 Univ., CELIA, CNRS-CEA, 33 - Talence (France); Hebert, D.; Chevalier, J.M.; Rullier, J.L.; Palmier, S. [CEA Centre d' Etudes Scientifiques et Techniques d' Aquitaine, 33 - Le Barp (France)


    Interaction of a laser beam with a target generates a high velocity expanding plasma plume, solid debris and liquid nano- and micro-particles. They are produced from plasma recombination and vapor condensation and can be deposited on optical elements located nearby the target. Two distinct kinds of particles were observed depending on the temperature achieved in the plasma plume: large micrometer-size fragments for temperatures lower than the critical temperature, and very small nanometer-size particles for higher temperatures. The paper presents experimental observations of fragments and nano-particles in plasma plumes and a comparison with models. A good agreement has been found for nano-particle sizes and distributions. This simple modeling can also be used for nuclei production in the nanosecond time scale. Our estimates show that particle size can be correlated to laser wavelength and fluences.

  19. Homogeneous cosmology with aggressively expanding civilizations

    CERN Document Server

    Olson, S Jay


    In the context of a homogeneous universe, we note that the appearance of aggressively expanding advanced life is geometrically similar to the process of nucleation and bubble growth in a first-order cosmological phase transition. We exploit this similarity to describe the dynamics of life saturating the universe on a cosmic scale, adapting the phase transition model to incorporate probability distributions of expansion and resource consumption strategies. Through a series of numerical solutions covering several orders of magnitude in the input assumption parameters, the resulting cosmological model is used to address basic questions related to the intergalactic spreading of life, dealing with issues such as timescales, observability, competition between strategies, and first-mover advantage. Finally, we examine physical effects on the universe itself, such as reheating and the backreaction on the evolution of the scale factor, if such life is able to control and convert a significant fraction of the available...

  20. Heptaphyrins: Expanded porphyrins with seven heterocyclic rings

    Indian Academy of Sciences (India)

    Venkataramanarao G Anand; Simi K Pushpan; Sundararaman Venkatraman; Tavarekere K Chandrashekar


    Expanded porphyrins containing seven pyrrole/heterocyclic rings linked in a cyclic fashion are termed heptaphyrins. The number of -electrons in heptaphyrins depends on the number of meso carbon bridges used to link the heterocyclic rings, accordingly heptaphyrins with 28-electrons and 30 -electrons are reported to date. Both condensation reactions of the appropriate precursors and acid-catalysed oxidative coupling reactions have been utilized to synthesise the heptaphyrins. The 30 heptaphyrins exhibit rich structural diversity where some of the heterocyclic rings in the macrocycle undergo a 180° ring flipping. An overview of the synthetic methods employed for the synthesis of heptaphyrins, their spectroscopic properties, structural behaviour and aromatic properties are highlighted in this paper.

  1. Helical chirality induction of expanded porphyrin analogues

    Indian Academy of Sciences (India)

    Jun-Ichiro Setsune


    Expanded porphyrin analogues with unique figure-eight conformation were prepared by way of useful pyrrole intermediates such as bis(azafulvene)s and 2-borylpyrrole. Supramolecular chirogenesis of cyclooctapyrrole O1 with 32-cycloconjugation was successfully applied to determine absolute configuration of chiral carboxylic acids. Dinuclear CuII complex of cyclooctapyrrole O2 with interrupted -conjugation was resolved by HPLC into enantiomers and their helical handedness was determined by theoretical simulation of their CD spectral pattern. Enantioselective induction of helicity in the metal helicate formation in the presence of a chiral promoter was demonstrated by using ()-(+)-1-(1-phenyl)ethylamine that favoured , helicity. Dinuclear CoII complexes of cyclotetrapyrroletetrapyridine O3 were found to be substitution labile and pick up amino acid anions in water. Those amino acid complexes of O3Co2 were rendered to adopt a particular unidirectional helical conformation preferentially depending on the ligated amino acid anion.

  2. Trichorhinophalangeal syndrome II, expanding the clinical spectrum

    Directory of Open Access Journals (Sweden)

    Rabah M. Shawky


    Full Text Available We report a 4.5 year old Egyptian male child, fourth in the order of birth of healthy remote consanguineous parents. He has typical facial as well as skeletal features of Trichorhinophalangeal syndrome (TRPS II. The facial features included bilateral downward slanting palpebral fissures, bulbous nose, long filtrum, retromicrognathia, sparse hair in the scalp and thick eyebrows. The skeletal features included retarded bone age, cone shaped epiphyses of the phalanges and multiple exostoses. The patient has also growth retardation, moderate mental retardation and hyperlaxity of the right knee joint. However our patient has some features not reported in TRPS II patients. These included bilateral partial ptosis, long eye lashes, preauricular skin tag, short 2nd right finger, short metacarpals of both thumbs. So we have to expand the clinical spectrum. Karyotype demonstrated 46,XY,del 8(q23.3-q24.1.

  3. Expanding Greenland’s Glacial Record

    DEFF Research Database (Denmark)

    Bjørk, Anders Anker

    Mass loss from the Greenland Ice Sheet and adjecent glaciers and ice caps has accelerated within the last decades, and these changes are accurately observed using a variety of different data products. However, the observational era is relatively short offering little insight into past dynamics. O...... the entire 20th century show rapid and widespread responses to climate change. On a longer time-scale is the Holocene history of Helheim Glacier reconstructed using evidence of glacial presence accumulated in lake sediments....... On order to expand the glacial history of Greenland, this thesis explores physical and geological archives for evidence of the glaciers’ past response to climatic variations. Using aerial photographs, the dynamic history of the Greenland Ice Sheet is extended back to 1900 C.E. Glacier changes covering...

  4. Gravitational wave memory in an expanding universe (United States)

    Tolish, Alexander; Wald, Robert


    We investigate the gravitational wave memory effect in an expanding FLRW spacetime. We find that if the gravitational field is decomposed into gauge-invariant scalar, vector, and tensor modes after the fashion of Bardeen, only the tensor mode gives rise to memory, and this memory can be calculated using the retarded Green's function associated with the tensor wave equation. If locally similar radiation source events occur on flat and FLRW backgrounds, we find that the resulting memories will differ only by a redshift factor, and we explore whether or not this factor depends on the expansion history of the FLRW universe. We compare our results to related work by Bieri, Garfinkle, and Yau.

  5. Expanding Policy Imagination in Political Economy

    DEFF Research Database (Denmark)

    Seabrooke, Leonard


    be implemented. Historical sociology provides a way to generate information about contextual constellations through two "tonics": intentional rationality and social mechanisms. With the assistance of these tonics, historical sociology widens political economy's policy imagination.......Much of the literature in political economy seeks to capture an essential insight into the evolution of political and economic systems to provide a foundation for policy advice. This article suggests that attempts to nut out the kernels of change often restrict rather than expand policy imagination...... capacity to see political, social, and economic changes that do not conform to conventional theories, as well as distorting our understanding of how the contemporary world works. What policymakers want, more than prediction or recitation of conventional theories, is context to understand how policy can...

  6. Henry Norris Russell and the Expanding Universe

    CERN Document Server

    DeVorkin, David H


    Henry Norris Russell, one of the most influential American astronomers of the first half of the 20th Century, had a special place in his heart for the Lowell Observatory. Although privately critical of the founder for his pronouncements about life on Mars and the superiority of the Mars Hill observing site, he always supported the Observatory in public and professional circles. He staunchly supported Tombaugh's detection of a planet as leading from Lowell's prediction, and always promoted V. M. Slipher's spectroscopic investigations of planetary and stellar phenomena. But how did he react to Slipher's puzzling detection of the extreme radial velocities of spiral nebulae starting in 1912, and how did he regard the extension and interpretation of those observations by Hubble and others in following decades? Here we describe the arc of Russell's reactions, dating from Slipher's first detection, as an indicator of how mainstream stellar astronomers reacted to the concept of an expanding universe.

  7. Cosmic strings in an expanding spacetime

    Energy Technology Data Exchange (ETDEWEB)

    Stein-Schabes, J.A.; Burd, A.B.


    We investigate the stability of a static, infinitely long and straight vacuum string solution under inhomogeneous axisymmetric time-dependent perturbations. We find it to be perturbatively stable. We further extend our work by finding a string solutions in an expanding Universe. The back reaction of the string on the gravitational field has been ignored. The background is assumed to be a Friedman-Robertson-Walker (FRW) cosmology. By numerically integrating the field equations in a radiation and matter dominated models, we discover oscillatory solutions. The possible damping of these oscillations is discussed. For late times the solution becomes identical to the static one studied in the first part of the paper. 19 refs., 8 figs.

  8. Roots Air Management System with Integrated Expander

    Energy Technology Data Exchange (ETDEWEB)

    Stretch, Dale [Eaton Corporation, Menomonee Falls, WI (United States); Wright, Brad [Eaton Corporation, Menomonee Falls, WI (United States); Fortini, Matt [Eaton Corporation, Menomonee Falls, WI (United States); Fink, Neal [Ballard Power Systems, Burnaby, BC (Canada); Ramadan, Bassem [Kettering Univ., Flint, MI (United States); Eybergen, William [Eaton Corporation, Menomonee Falls, WI (United States)


    PEM fuel cells remain an emerging technology in the vehicle market with several cost and reliability challenges that must be overcome in order to increase market penetration and acceptance. The DOE has identified the lack of a cost effective, reliable, and efficient air supply system that meets the operational requirements of a pressurized PEM 80kW fuel cell as one of the major technological barriers that must be overcome. This project leveraged Roots positive displacement development advancements and demonstrated an efficient and low cost fuel cell air management system. Eaton built upon its P-Series Roots positive displacement design and shifted the peak efficiency making it ideal for use on an 80kW PEM stack. Advantages to this solution include: • Lower speed of the Roots device eliminates complex air bearings present on other systems. • Broad efficiency map of Roots based systems provides an overall higher drive cycle fuel economy. • Core Roots technology has been developed and validated for other transportation applications. Eaton modified their novel R340 Twin Vortices Series (TVS) Roots-type supercharger for this application. The TVS delivers more power and better fuel economy in a smaller package as compared to other supercharger technologies. By properly matching the helix angle with the rotor’s physical aspect ratio, the supercharger’s peak efficiency can be moved to the operating range where it is most beneficial for the application. The compressor was designed to meet the 90 g/s flow at a pressure ratio of 2.5, similar in design to the P-Series 340. A net shape plastic expander housing with integrated motor and compressor was developed to significantly reduce the cost of the system. This integrated design reduced part count by incorporating an overhung expander and motor rotors into the design such that only four bearings and two shafts were utilized.

  9. Single-nucleotide polymorphism array-based karyotyping of acute promyelocytic leukemia.

    Directory of Open Access Journals (Sweden)

    Inés Gómez-Seguí

    Full Text Available Acute promyelocytic leukemia (APL is characterized by the t(15;17(q22;q21, but additional chromosomal abnormalities (ACA and other rearrangements can contribute in the development of the whole leukemic phenotype. We hypothesized that some ACA not detected by conventional techniques may be informative of the onset of APL. We performed the high-resolution SNP array (SNP-A 6.0 (Affymetrix in 48 patients diagnosed with APL on matched diagnosis and remission sample. Forty-six abnormalities were found as an acquired event in 23 patients (48%: 22 duplications, 23 deletions and 1 Copy-Neutral Loss of Heterozygocity (CN-LOH, being a duplication of 8(q24 (23% and a deletion of 7(q33-qter (6% the most frequent copy-number abnormalities (CNA. Four patients (8% showed CNAs adjacent to the breakpoints of the translocation. We compared our results with other APL series and found that, except for dup(8q24 and del(7q33-qter, ACA were infrequent (≤3% but most of them recurrent (70%. Interestingly, having CNA or FLT3 mutation were mutually exclusive events. Neither the number of CNA, nor any specific CNA was associated significantly with prognosis. This study has delineated recurrent abnormalities in addition to t(15;17 that may act as secondary events and could explain leukemogenesis in up to 40% of APL cases with no ACA by conventional cytogenetics.

  10. An Optical Phased Array for LIDAR (United States)

    Wang, Y.; Wu, M. C.


    We have previously demonstrated the development of an Optical Phased Array (OPA) micromechanical system (MEMS) used for beam steering, which shows great advantages over previous mechanisms such as opto-mechanical, acousto-optical (AO) or electro-optical (EO). We aim to integrate the OPA MEMS system into the application of automobile navigation, which is currently primarily dominated by opto-mechanical scanning based systems. Opto-mechanical scanning devices are usually bulky and relatively slow, while competing technologies (AO, EO) utilize devices that while small in size, cannot provide the steering speeds and versatility necessary for many applications. In drawing from phased array concepts that revolutionized RADAR technology by providing a compact, agile alternative to mechanically steered technology, the OPA based LIDAR program seeks to integrate thousands of closely packed optical emitting facets, precise relative electronic phase control of these facets, and all within a very small form factor. Comparing with other competing LIDAR system, the OPA based LIDAR system will have multiple degrees of freedom for phase control which enables not only agile beam steering but also beam forming and multiple beam generation, greatly expanding the diversity of applications.

  11. Microfabricated microbial fuel cell arrays reveal electrochemically active microbes.

    Directory of Open Access Journals (Sweden)

    Huijie Hou

    Full Text Available Microbial fuel cells (MFCs are remarkable "green energy" devices that exploit microbes to generate electricity from organic compounds. MFC devices currently being used and studied do not generate sufficient power to support widespread and cost-effective applications. Hence, research has focused on strategies to enhance the power output of the MFC devices, including exploring more electrochemically active microbes to expand the few already known electricigen families. However, most of the MFC devices are not compatible with high throughput screening for finding microbes with higher electricity generation capabilities. Here, we describe the development of a microfabricated MFC array, a compact and user-friendly platform for the identification and characterization of electrochemically active microbes. The MFC array consists of 24 integrated anode and cathode chambers, which function as 24 independent miniature MFCs and support direct and parallel comparisons of microbial electrochemical activities. The electricity generation profiles of spatially distinct MFC chambers on the array loaded with Shewanella oneidensis MR-1 differed by less than 8%. A screen of environmental microbes using the array identified an isolate that was related to Shewanella putrefaciens IR-1 and Shewanella sp. MR-7, and displayed 2.3-fold higher power output than the S. oneidensis MR-1 reference strain. Therefore, the utility of the MFC array was demonstrated.

  12. Plasma-assisted cataluminescence sensor array for gaseous hydrocarbons discrimination. (United States)

    Na, Na; Liu, Haiyan; Han, Jiaying; Han, Feifei; Liu, Hualin; Ouyang, Jin


    Combining plasma activation and cross-reactivity of sensor array, we have developed a plasma-assisted cataluminescence (PA-CTL) sensor array for fast sensing and discrimination of gaseous hydrocarbons, which can be potentially used for fast diagnosis of lung cancer. Based on dielectric barrier discharge, a low-temperature plasma is generated to activate gaseous hydrocarbons with low cataluminescence (CTL) activities. Extremely increased CTL responses have been obtained, which resulted in a plasma assistance factor of infinity (∞) for some hydrocarbons. On a 4 × 3 PA-CTL sensor array made from alkaline-earth nanomaterials, gaseous hydrocarbons showed robust and unique CTL responses to generate characteristic patterns for fast discrimination. Because of the difference in the component of hydrocarbons in breath, exhaled breath samples from donors with and without lung cancer were tested, and good discrimination has been achieved by this technique. In addition, the feasibility of multidimentional detection based on temperature was confirmed. It had good reproducibility and gave a linear range of 65-6500 ng/mL or 77-7700 ppmv (R > 0.98) for CH(4) with a detection limit of 33 ng/mL (38 ppmv) on MgO. The PA-CTL sensor array is simple, low-cost, thermally stable, nontoxic, and has an abundance of alkaline-earth nanomaterials to act as sensing elements. This has expanded the applications of CTL-based senor arrays and will show great potential in clinical fast diagnosis.

  13. Study on failure analysis of array chip components in IRFPA (United States)

    Zhang, Xiaonan; He, Yingjie; Li, Jinping


    Infrared focal plane array detector has advantages of strong anti-interference ability and high sensitivity. Its size, weight and power dissipation has been noticeably decreased compared to the conventional infrared imaging system. With the development of the detector manufacture technology and the cost reduction, IRFPA detector has been widely used in the military and commercial fields. Due to the restricting of array chip manufacturing process and material defects, the fault phenomenon such as cracking, bad pixel and abnormal output was showed during the test, which restricts the performance of the infrared detector imaging system, and these effects are gradually intensified with the expanding of the focal plane array size and the shrinking of the pixel size. Based on the analysis of the test results for the infrared detector array chip components, the fault phenomenon was classified. The main cause of the chip component failure is chip cracking, bad pixel and abnormal output. The reason of the failure has been analyzed deeply. According to analyze the mechanism of the failure, a series of measures which contain filtrating materials and optimizing the manufacturing process of array chip components were used to improve the performance of the chip components and the test pass rate, which is used to meet the needs of the detector performance.

  14. A new method of broadband constant beamwidth beamforming for arbitrary geometry arrays

    Institute of Scientific and Technical Information of China (English)

    YANG Yixin; SUN Chao; LI Bin


    A new method of broadband constant beamwidth beamforming for arbitrary geometry arrays is proposed. In this method, the response vector of an arbitrary geometry array is expanded into the form of sum of an infinite series, whose core function is the first kind Bessel function. The high terms of this series are truncated so that the array response vectors at different frequencies can be transformed to a reference frequency arid then the constant beamwidth beamforming vectors are ready to obtain. With these beamforming vectors, beams at different frequencies are same as the reference beam. A reference beam optimizing method based on adaptive processing is also proposed to optimize the reference beam of arbitrary geometry arrays. Computer simulation for a uniform circular array verified the effectiveness of the new method proposed.

  15. Compact Transducers and Arrays (United States)


    Soc. Am., 104, pp.64-71 44 25.Decarpigny, J.N., J.C. Debus, B. Tocquet & D. Boucher. 1985. "In-Air Analysis Of Piezoelectric Tonpilz Transducers In A... Transducers and Arrays Final Report May 2005 Contacts: Dr. Robert E. Newnham The Pennsylvania State University, 251 MRL, University Park, PA 16802 phone...814) 865-1612 fax: (814) 865-2326 email: ....c .u a.p.u..c.e.du. Dr. Richard J. Meyer, Jr. Systems Engineering ( Transducers ), ARL

  16. Identifying alternative hyper-splicing signatures in MG-thymoma by exon arrays.

    Directory of Open Access Journals (Sweden)

    Lilach Soreq

    Full Text Available BACKGROUND: The vast majority of human genes (>70% are alternatively spliced. Although alternative pre-mRNA processing is modified in multiple tumors, alternative hyper-splicing signatures specific to particular tumor types are still lacking. Here, we report the use of Affymetrix Human Exon Arrays to spot hyper-splicing events characteristic of myasthenia gravis (MG-thymoma, thymic tumors which develop in patients with MG and discriminate them from colon cancer changes. METHODOLOGY/PRINCIPAL FINDINGS: We combined GO term to parent threshold-based and threshold-independent ad-hoc functional statistics with in-depth analysis of key modified transcripts to highlight various exon-specific changes. These denote alternative splicing in MG-thymoma tumors compared to healthy human thymus and to in-house and Affymetrix datasets from colon cancer and healthy tissues. By using both global and specific, term-to-parent Gene Ontology (GO statistical comparisons, our functional integrative ad-hoc method allowed the detection of disease-relevant splicing events. CONCLUSIONS/SIGNIFICANCE: Hyper-spliced transcripts spanned several categories, including the tumorogenic ERBB4 tyrosine kinase receptor and the connective tissue growth factor CTGF, as well as the immune function-related histocompatibility gene HLA-DRB1 and interleukin (IL19, two muscle-specific collagens and one myosin heavy chain gene; intriguingly, a putative new exon was discovered in the MG-involved acetylcholinesterase ACHE gene. Corresponding changes in spliceosome composition were indicated by co-decreases in the splicing factors ASF/SF(2 and SC35. Parallel tumor-associated changes occurred in colon cancer as well, but the majority of the apparent hyper-splicing events were particular to MG-thymoma and could be validated by Fluorescent In-Situ Hybridization (FISH, Reverse Transcription-Polymerase Chain Reaction (RT-PCR and mass spectrometry (MS followed by peptide sequencing. Our findings

  17. Nonlinear phased array imaging (United States)

    Croxford, Anthony J.; Cheng, Jingwei; Potter, Jack N.


    A technique is presented for imaging acoustic nonlinearity within a specimen using ultrasonic phased arrays. Acoustic nonlinearity is measured by evaluating the difference in energy of the transmission bandwidth within the diffuse field produced through different focusing modes. The two different modes being classical beam forming, where delays are applied to different element of a phased array to physically focus the energy at a single location (parallel firing) and focusing in post processing, whereby one element at a time is fired and a focused image produced in post processing (sequential firing). Although these two approaches are linearly equivalent the difference in physical displacement within the specimen leads to differences in nonlinear effects. These differences are localized to the areas where the amplitude is different, essentially confining the differences to the focal point. Direct measurement at the focal point are however difficult to make. In order to measure this the diffuse field is used. It is a statistical property of the diffuse field that it represents the total energy in the system. If the energy in the diffuse field for both the sequential and parallel firing case is measured then the difference between these, within the input signal bandwidth, is largely due to differences at the focal spot. This difference therefore gives a localized measurement of where energy is moving out of the transmission bandwidth due to nonlinear effects. This technique is used to image fatigue cracks and other damage types undetectable with conventional linear ultrasonic measurements.

  18. Microplasma generating array

    Energy Technology Data Exchange (ETDEWEB)

    Hopwood, Jeffrey A.; Wu, Chen; Hoskinson, Alan R.; Sonkusale, Sameer


    A microplasma generator includes first and second conductive resonators disposed on a first surface of a dielectric substrate. The first and second conductive resonators are arranged in line with one another with a gap defined between a first end of each resonator. A ground plane is disposed on a second surface of the dielectric substrate and a second end of each of the first and second resonators is coupled to the ground plane. A power input connector is coupled to the first resonator at a first predetermined distance from the second end chosen as a function of the impedance of the first conductive resonator. A microplasma generating array includes a number of resonators in a dielectric material substrate with one end of each resonator coupled to ground. A micro-plasma is generated at the non-grounded end of each resonator. The substrate includes a ground electrode and the microplasmas are generated between the non-grounded end of the resonator and the ground electrode. The coupling of each resonator to ground may be made through controlled switches in order to turn each resonator off or on and therefore control where and when a microplasma will be created in the array.

  19. Electromagnetically Clean Solar Arrays (United States)

    Stem, Theodore G.; Kenniston, Anthony E.


    The term 'electromagnetically clean solar array' ('EMCSA') refers to a panel that contains a planar array of solar photovoltaic cells and that, in comparison with a functionally equivalent solar-array panel of a type heretofore used on spacecraft, (1) exhibits less electromagnetic interferences to and from other nearby electrical and electronic equipment and (2) can be manufactured at lower cost. The reduction of electromagnetic interferences is effected through a combination of (1) electrically conductive, electrically grounded shielding and (2) reduction of areas of current loops (in order to reduce magnetic moments). The reduction of cost is effected by designing the array to be fabricated as a more nearly unitary structure, using fewer components and fewer process steps. Although EMCSAs were conceived primarily for use on spacecraft they are also potentially advantageous for terrestrial applications in which there are requirements to limit electromagnetic interference. In a conventional solar panel of the type meant to be supplanted by an EMCSA panel, the wiring is normally located on the back side, separated from the cells, thereby giving rise to current loops having significant areas and, consequently, significant magnetic moments. Current-loop geometries are chosen in an effort to balance opposing magnetic moments to limit far-0field magnetic interactions, but the relatively large distances separating current loops makes full cancellation of magnetic fields problematic. The panel is assembled from bare photovoltaic cells by means of multiple sensitive process steps that contribute significantly to cost, especially if electomagnetic cleanliness is desired. The steps include applying a cover glass and electrical-interconnect-cell (CIC) sub-assemble, connecting the CIC subassemblies into strings of series-connected cells, laying down and adhesively bonding the strings onto a panel structure that has been made in a separate multi-step process, and mounting the

  20. Electrodynamic Arrays Having Nanomaterial Electrodes (United States)

    Trigwell, Steven (Inventor); Biris, Alexandru S. (Inventor); Calle, Carlos I. (Inventor)


    An electrodynamic array of conductive nanomaterial electrodes and a method of making such an electrodynamic array. In one embodiment, a liquid solution containing nanomaterials is deposited as an array of conductive electrodes on a substrate, including rigid or flexible substrates such as fabrics, and opaque or transparent substrates. The nanomaterial electrodes may also be grown in situ. The nanomaterials may include carbon nanomaterials, other organic or inorganic nanomaterials or mixtures.

  1. Expandable Purge Chambers Would Protect Cryogenic Fittings (United States)

    Townsend, Ivan I., III


    Expandable ice-prevention and cleanliness-preservation (EIP-CP) chambers have been proposed to prevent the accumulation of ice or airborne particles on quick-disconnect (QD) fittings, or on ducts or tubes that contain cryogenic fluids. In the original application for which the EIP-CP chambers were conceived, there is a requirement to be able to disconnect and reconnect the QD fittings in rapid succession. If ice were to form on the fittings by condensation and freezing of airborne water vapor on the cold fitting surfaces, the ice could interfere with proper mating of the fittings, making it necessary to wait an unacceptably long time for the ice to thaw before attempting reconnection. By keeping water vapor away from the cold fitting surfaces, the EIP-CP chambers would prevent accumulation of ice, preserving the ability to reconnect as soon as required. Basically, the role of an EIP-CP chamber would be to serve as an enclosure for a flow of dry nitrogen gas that would keep ambient air away from QD cryogenic fittings. An EIP-CP chamber would be an inflatable device made of a fabriclike material. The chamber would be attached to an umbilical plate holding a cryogenic QD fitting.

  2. Expanded polylactide bead foaming - A new technology (United States)

    Nofar, M.; Ameli, A.; Park, C. B.


    Bead foaming technology with double crystal melting peak structure has been recognized as a promising method to produce low-density foams with complex geometries. During the molding stage of the bead foams, the double peak structure generates a strong bead-to-bead sintering and maintains the overall foam structure. During recent years, polylactide (PLA) bead foaming has been of the great interest of researchers due to its origin from renewable resources and biodegradability. However, due to the PLA's low melt strength and slow crystallization kinetics, the attempts have been limited to the manufacturing methods used for expanded polystyrene. In this study, for the first time, we developed microcellular PLA bead foams with double crystal melting peak structure. Microcellular PLA bead foams were produced with expansion ratios and average cell sizes ranging from 3 to 30-times and 350 nm to 15 µm, respectively. The generated high melting temperature crystals during the saturation significantly affected the expansion ratio and cell density of the PLA bead foams by enhancing the PLA's poor melt strength and promoting heterogeneous cell nucleation around the crystals.

  3. The expanding fireball of Nova Delphini 2013. (United States)

    Schaefer, G H; ten Brummelaar, T; Gies, D R; Farrington, C D; Kloppenborg, B; Chesneau, O; Monnier, J D; Ridgway, S T; Scott, N; Tallon-Bosc, I; McAlister, H A; Boyajian, T; Maestro, V; Mourard, D; Meilland, A; Nardetto, N; Stee, P; Sturmann, J; Vargas, N; Baron, F; Ireland, M; Baines, E K; Che, X; Jones, J; Richardson, N D; Roettenbacher, R M; Sturmann, L; Turner, N H; Tuthill, P; van Belle, G; von Braun, K; Zavala, R T; Banerjee, D P K; Ashok, N M; Joshi, V; Becker, J; Muirhead, P S


    A classical nova occurs when material accreting onto the surface of a white dwarf in a close binary system ignites in a thermonuclear runaway. Complex structures observed in the ejecta at late stages could result from interactions with the companion during the common-envelope phase. Alternatively, the explosion could be intrinsically bipolar, resulting from a localized ignition on the surface of the white dwarf or as a consequence of rotational distortion. Studying the structure of novae during the earliest phases is challenging because of the high spatial resolution needed to measure their small sizes. Here we report near-infrared interferometric measurements of the angular size of Nova Delphini 2013, starting one day after the explosion and continuing with extensive time coverage during the first 43 days. Changes in the apparent expansion rate can be explained by an explosion model consisting of an optically thick core surrounded by a diffuse envelope. The optical depth of the ejected material changes as it expands. We detect an ellipticity in the light distribution, suggesting a prolate or bipolar structure that develops as early as the second day. Combining the angular expansion rate with radial velocity measurements, we derive a geometric distance to the nova of 4.54 ± 0.59 kiloparsecs from the Sun.

  4. Expanding the role of internal facility assessments

    Energy Technology Data Exchange (ETDEWEB)

    Kolpa, R.L.; Levenson, J.B. [Argonne National Lab., IL (United States); Weaver, M.A. [Headquarters Air Force Materiel Command, Wright-Patterson AFB, OH (United States)


    The US Air Force (USAF) Environmental Compliance Assessment and Management Program (ECAMP) is an effective and comprehensive system to evaluate environmental compliance at individual USAF installations. The ECAMP assessment is typically performed by a team of experts from the installation`s Major Command (MAJCOM) Headquarters, and is often augmented with technical contractor support. As directed by Air Force policy, an external ECAMP assessment is required at a minimum of every three years for each installation. In the intervening years, each installation is required to perform an internal ECAMP assessment, with its own personnel and resources. Even though team composition differs, the internal and external ECAMP assessments are likely to be very similar in scope, objectives, and deliverables. For over nine years, Argonne National Laboratory (ANL) has supported several Air Force MAJCOMs in performing their external ECAMP assessments. More recently, ANL has also had the opportunity to provide technical support and training at individual installations during their preparation and conduct of internal ECAMP assessments. From that experience, the authors have learned that the quality and value of the internal assessment is enhanced by making it a vehicle for training, planning, and interaction among organizations. Various strategies and techniques have been successfully employed to derive maximum benefit and insight from the internal assessment process. Experiences that involve expanding the scope and objectives of internal assessments to meet specific goals are presented. The expansion of scope and objectives include preassessment training, planning, and evaluator interactions as part of the overall internal assessment process.

  5. Massive Fermi gas in the expanding universe (United States)

    Trautner, Andreas


    The behavior of a decoupled ideal Fermi gas in a homogeneously expanding three-dimensional volume is investigated, starting from an equilibrium spectrum. In case the gas is massless and/or completely degenerate, the spectrum of the gas can be described by an effective temperature and/or an effective chemical potential, both of which scale down with the volume expansion. In contrast, the spectrum of a decoupled massive and non-degenerate gas can only be described by an effective temperature if there are strong enough self-interactions such as to maintain an equilibrium distribution. Assuming perpetual equilibration, we study a decoupled gas which is relativistic at decoupling and then is red-shifted until it becomes non-relativistic. We find expressions for the effective temperature and effective chemical potential which allow us to calculate the final spectrum for arbitrary initial conditions. This calculation is enabled by a new expansion of the Fermi-Dirac integral, which is for our purpose superior to the well-known Sommerfeld expansion. We also compute the behavior of the phase space density under expansion and compare it to the case of real temperature and real chemical potential. Using our results for the degenerate case, we also obtain the mean relic velocity of the recently proposed non-thermal cosmic neutrino background.

  6. The expanding universe of prion diseases.

    Directory of Open Access Journals (Sweden)

    Joel C Watts


    Full Text Available Prions cause fatal and transmissible neurodegenerative disease. These etiological infectious agents are formed in greater part from a misfolded cell-surface protein called PrP(C. Several mammalian species are affected by the diseases, and in the case of "mad cow disease" (BSE the agent has a tropism for humans, with negative consequences for agribusiness and public health. Unfortunately, the known universe of prion diseases is expanding. At least four novel prion diseases--including human diseases variant Creutzfeldt-Jakob disease (vCJD and sporadic fatal insomnia (sFI, bovine amyloidotic spongiform encephalopathy (BASE, and Nor98 of sheep--have been identified in the last ten years, and chronic wasting disease (CWD of North American deer (Odocoileus Specis and Rocky Mountain elk (Cervus elaphus nelsoni is undergoing a dramatic spread across North America. While amplification (BSE and dissemination (CWD, commercial sourcing of cervids from the wild and movement of farmed elk can be attributed to human activity, the origins of emergent prion diseases cannot always be laid at the door of humankind. Instead, the continued appearance of new outbreaks in the form of "sporadic" disease may be an inevitable outcome in a situation where the replicating pathogen is host-encoded.

  7. The expanding universe of prion diseases.

    Directory of Open Access Journals (Sweden)


    Full Text Available Prions cause fatal and transmissible neurodegenerative disease. These etiological infectious agents are formed in greater part from a misfolded cell-surface protein called PrP(C. Several mammalian species are affected by the diseases, and in the case of "mad cow disease" (BSE the agent has a tropism for humans, with negative consequences for agribusiness and public health. Unfortunately, the known universe of prion diseases is expanding. At least four novel prion diseases-including human diseases variant Creutzfeldt-Jakob disease (vCJD and sporadic fatal insomnia (sFI, bovine amyloidotic spongiform encephalopathy (BASE, and Nor98 of sheep-have been identified in the last ten years, and chronic wasting disease (CWD of North American deer (Odocoileus Specis and Rocky Mountain elk (Cervus elaphus nelsoni is undergoing a dramatic spread across North America. While amplification (BSE and dissemination (CWD, commercial sourcing of cervids from the wild and movement of farmed elk can be attributed to human activity, the origins of emergent prion diseases cannot always be laid at the door of humankind. Instead, the continued appearance of new outbreaks in the form of "sporadic" disease may be an inevitable outcome in a situation where the replicating pathogen is host-encoded.

  8. Filtration application from recycled expanded polystyrene. (United States)

    Shin, C


    Water-in-oil emulsion with drop size less than 100 mum is difficult to separate. Coalescence filtration is economical and effective for separation of secondary dispersions. Coalescence performance depends on flow rate, bed depth, fiber surface properties, and drop size. The amount of surface area of the fibers directly affects the efficiency. A new recycling method was investigated in the previous work in which polystyrene (PS) sub-mum fibers were electro-spun from recycled expanded polystyrene (EPS). These fibers are mixed with micro glass fibers to modify the glass fiber filter media. The filter media are tested in the separation of water droplets from an emulsion of water droplets in oil. The experimental results in this work show that adding nanofibers to conventional micron sized fibrous filter media improves the separation efficiency of the filter media but also increases the pressure drop. An optimum in the performance occurs (significant increase in efficiency with minimal increase in pressure drop) with the addition of about 4% by mass of 500 nm diameter PS nanofibers to glass fibers for the filters.

  9. Physical expander in Virtual Tree Overlay

    CERN Document Server

    Izumi, Taisuke; Valero, Mathieu


    In this paper, we propose a new construction of constantdegree expanders motivated by their application in P2P overlay networks and in particular in the design of robust trees overlay. Our key result can be stated as follows. Consider a complete binary tree T and construct a random pairing {\\Pi} between leaf nodes and internal nodes. We prove that the graph G\\Pi obtained from T by contracting all pairs (leaf-internal nodes) achieves a constant node expansion with high probability. The use of our result in improving the robustness of tree overlays is straightforward. That is, if each physical node participating to the overlay manages a random pair that couples one virtual internal node and one virtual leaf node then the physical-node layer exhibits a constant expansion with high probability. We encompass the difficulty of obtaining this random tree virtualization by proposing a local, selforganizing and churn resilient uniformly-random pairing algorithm with O(log2 n) running time. Our algorithm has the merit ...

  10. Expanding Taylor bubble under constant heat flux (United States)

    Voirand, Antoine; Benselama, Adel M.; Ayel, Vincent; Bertin, Yves


    Modelization of non-isothermal bubbles expanding in a capillary, as a contribution to the understanding of the physical phenomena taking place in Pulsating Heat Pipes (PHPs), is the scope of this paper. The liquid film problem is simplified and solved, while the thermal problem takes into account a constant heat flux density applied at the capillary tube wall, exchanging with the liquid film surrounding the bubble and also with the capillary tube outside medium. The liquid slug dynamics is solved using the Lucas-Washburn equation. Mass and energy balance on the vapor phase allow governing equations of bubble expansion to be written. The liquid and vapor phases are coupled only through the saturation temperature associated with the vapor pressure, assumed to be uniform throughout the bubble. Results show an over-heating of the vapor phase, although the particular thermal boundary condition used here always ensures an evaporative mass flux at the liquid-vapor interface. Global heat exchange is also investigated, showing a strong decreasing of the PHP performance to convey heat by phase change means for large meniscus velocities.

  11. Cascading Constrained 2-D Arrays using Periodic Merging Arrays

    DEFF Research Database (Denmark)

    Forchhammer, Søren; Laursen, Torben Vaarby


    We consider a method for designing 2-D constrained codes by cascading finite width arrays using predefined finite width periodic merging arrays. This provides a constructive lower bound on the capacity of the 2-D constrained code. Examples include symmetric RLL and density constrained codes....... Numerical results for the capacities are presented....

  12. Array biosensor: recent developments (United States)

    Golden, Joel P.; Rowe-Taitt, Chris A.; Feldstein, Mark J.; Ligler, Frances S.


    A fluorescence-based immunosensor has been developed for simultaneous analyses of multiple samples for 1 to 6 different antigens. A patterned array of recognition antibodies immobilized on the surface of a planar waveguide is used to 'capture' analyte present in samples. Bound analyte is then quantified by means of fluorescent detector molecules. Upon excitation of the fluorescent label by a small diode laser, a CCD camera detects the pattern of fluorescent antigen:antibody complexes on the sensor surface. Image analysis software correlates the position of fluorescent signals with the identity of the analyte. A new design for a fluidics distribution system is shown, as well as results from assays for physiologically relevant concentrations of staphylococcal enterotoxin B (SEB), F1 antigen from Yersinia pestis, and D- dimer, a marker of sepsis and thrombotic disorders.

  13. The Submillimeter Array Polarimeter

    CERN Document Server

    Marrone, Daniel P


    We describe the Submillimeter Array (SMA) Polarimeter, a polarization converter and feed multiplexer installed on the SMA. The polarimeter uses narrow-band quarter-wave plates to generate circular polarization sensitivity from the linearly-polarized SMA feeds. The wave plates are mounted in rotation stages under computer control so that the polarization handedness of each antenna is rapidly selectable. Positioning of the wave plates is found to be highly repeatable, better than 0.2 degrees. Although only a single polarization is detected at any time, all four cross correlations of left- and right-circular polarization are efficiently sampled on each baseline through coordinated switching of the antenna polarizations in Walsh function patterns. The initial set of anti-reflection coated quartz and sapphire wave plates allows polarimetry near 345 GHz; these plates have been have been used in observations between 325 and 350 GHz. The frequency-dependent cross-polarization of each antenna, largely due to the varia...

  14. Spherical Accretion in a Uniformly Expanding Universe (United States)

    Colpi, Monica; Shapiro, Stuart L.; Wasserman, Ira


    We consider spherically symmetric accretion of material from an initially homogeneous, uniformly expanding medium onto a Newtonian point mass M. The gas is assumed to evolve adiabatically with a constant adiabatic index F, which we vary over the range Γ ɛ [1, 5/3]. We use a one-dimensional Lagrangian code to follow the spherical infall of material as a function of time. Outflowing shells gravitationally bound to the point mass fall back, giving rise to a inflow rate that, after a rapid rise, declines as a power law in time. If there were no outflow initially, Bondi accretion would result, with a characteristic accretion time-scale ta,0. For gas initially expanding at a uniform rate, with a radial velocity U = R/t0 at radius R, the behavior of the flow at all subsequent times is determined by ta,0/t0. If ta,0/t0 ≫ 1, the gas has no time to respond to pressure forces, so the fluid motion is nearly collisionless. In this case, only loosely bound shells are influenced by pressure gradients and are pushed outward. The late-time evolution of the mass accretion rate Mdot is close to the result for pure dust, and we develop a semianalytic model that accurately accounts for the small effect of pressure gradients in this limit. In the opposite regime, ta,0/t0 ≪ 1, pressure forces significantly affect the motion of the gas. At sufficiently early times, t ≤ ttr, the flow evolved along a sequence of quasi-stationary, Bondi-like states, with a time-dependent Mdot determined by the slowly varying gas density at large distances. However, at later times, t ≥ ttr, the fluid flow enters a dustllke regime; ttr is the time when the instantaneous Bondi accretion radius reaches the marginally bound radius. The transition time ttr depends sensitively on ta,0/t0 for a given Γ and can greatly exceed t0. We show that there exists a critical value Γ = 11/9, below which the transition from fluid to ballistic motion disappears. As one application of our calculations, we consider the

  15. Expanding on Successful Concepts, Models, and Organization

    Energy Technology Data Exchange (ETDEWEB)

    Teeguarden, Justin G.; Tan, Yu-Mei; Edwards, Stephen W.; Leonard, Jeremy A.; Anderson, Kim A.; Corley, Richard A.; Kile, Molly L.; L. Massey Simonich, Staci; Stone, David; Tanguay, Robert L.; Waters, Katrina M.; Harper, Stacey L.; Williams, David E.


    In her letter to the editor1 regarding our recent Feature Article “Completing the Link between Exposure Science and Toxicology for Improved Environmental Health Decision Making: The Aggregate Exposure Pathway Framework” 2, Dr. von Göetz expressed several concerns about terminology, and the perception that we propose the replacement of successful approaches and models for exposure assessment with a concept. We are glad to have the opportunity to address these issues here. If the goal of the AEP framework was to replace existing exposure models or databases for organizing exposure data with a concept, we would share Dr. von Göetz concerns. Instead, the outcome we promote is broader use of an organizational framework for exposure science. The framework would support improved generation, organization, and interpretation of data as well as modeling and prediction, not replacement of models. The field of toxicology has seen the benefits of wide use of one or more organizational frameworks (e.g., mode and mechanism of action, adverse outcome pathway). These frameworks influence how experiments are designed, data are collected, curated, stored and interpreted and ultimately how data are used in risk assessment. Exposure science is poised to similarly benefit from broader use of a parallel organizational framework, which Dr. von Göetz correctly points out, is currently used in the exposure modeling community. In our view, the concepts used so effectively in the exposure modeling community, expanded upon in the AEP framework, could see wider adoption by the field as a whole. The value of such a framework was recognized by the National Academy of Sciences.3 Replacement of models, databases, or any application with the AEP framework was not proposed in our article. The positive role broader more consistent use of such a framework might have in enabling and advancing “general activities such as data acquisition, organization…,” and exposure modeling was discussed

  16. Expanding Awareness of Docosahexaenoic Acid during Pregnancy

    Directory of Open Access Journals (Sweden)

    Barbara J. Meyer


    Full Text Available Pregnant women do not currently meet the consensus recommendation for docosahexaenoic acid (DHA (≥200 mg/day. Pregnant women in Australia are not receiving information on the importance of DHA during pregnancy. DHA pregnancy education materials were developed using current scientific literature, and tested for readability and design aesthetics. The study aimed to evaluate their usefulness, the desire for pregnant women to receive these materials and whether a larger separate study (using a control group is warranted to evaluate the influence the materials may have on increasing DHA consumption in pregnant women in Australia. Pregnant women (N = 118 were recruited at antenatal clinics at two NSW hospitals. Participants completed a 16-item questionnaire and DHA educational materials (pamphlet and shopping card were provided. Participants were contacted via phone two weeks later and completed the second questionnaire (25-item, N = 74. Statistics were conducted in SPSS and qualitative data were analysed to identify common themes. Ninety three percent of women found the materials useful, with the main reason being it expanded their knowledge of DHA food sources. Only 34% of women had received prior information on DHA, yet 68% said they would like to receive information. Due to the small sample size and lack of a control group, this small study cannot provide a cause and effect relationship between the materials and nutrition related behaviours or knowledge, however the results indicate a potential positive influence towards increased fish consumption and awareness of DHA containing foods. This suggests a larger study, with a control group is warranted to identify the impact such materials could have on Australian pregnant women.

  17. Gonadotropin releasing hormone agonists: Expanding vistas

    Directory of Open Access Journals (Sweden)

    Navneet Magon


    Full Text Available Gonadotropin-releasing hormone (GnRH agonists are derived from native GnRH by amino acid substitution which yields the agonist resistant to degradation and increases its half-life. The hypogonadotropic hypogonadal state produced by GnRH agonists has been often dubbed as "pseudomenopause" or "medical oophorectomy," which are both misnomers. GnRH analogues (GnRH-a work by temporarily "switching off" the ovaries. Ovaries can be "switched off" for the therapy and therapeutic trial of many conditions which include but are not limited to subfertility, endometriosis, adenomyosis, uterine leiomyomas, precocious puberty, premenstrual dysphoric disorder, chronic pelvic pain, or the prevention of menstrual bleeding in special clinical situations. Rapidly expanding vistas of usage of GnRH agonists encompass use in sex reassignment of male to female transsexuals, management of final height in cases of congenital adrenal hyperplasia, and preserving ovarian function in women undergoing cytotoxic chemotherapy. Hypogonadic side effects caused by the use of GnRH agonists can be tackled with use of "add-back" therapy. Goserelin, leuprolide, and nafarelin are commonly used in clinical practice. GnRH-a have provided us a powerful therapeutic approach to the treatment of numerous conditions in reproductive medicine. Recent synthesis of GnRH antagonists with a better tolerability profile may open new avenues for both research and clinical applications. All stakeholders who are partners in women′s healthcare need to join hands to spread awareness so that these drugs can be used to realize their full potential.

  18. AstroCom NYC: Expanding the Partnership (United States)

    Paglione, Timothy; Ford, Saavik; Agueros, Marcel A.; Mac Low, Mordecai-Mark; Robbins, Dennis


    AstroCom NYC is an undergraduate mentoring program designed to improve urban minority student access to opportunities in astrophysical research by greatly enhancing partnerships between research astronomers in New York City (City University of New York - an MSI, American Museum of Natural History, and Columbia). AstroCom NYC provides centralized, personalized mentoring as well as financial and academic support, to CUNY undergraduates throughout their studies, plus the resources and opportunities to further CUNY faculty research with students. The goal is that students' residency at AMNH helps them build a sense of belonging in the field, and readies and inspires them for graduate study. AstroCom NYC provides a rigorous Methods of Scientific Research course developed specifically to this purpose, a laptop, research and career mentors, outreach activities, scholarships and stipends, Metrocards, and regular assessment for maximum effectiveness. Stipends in part alleviate the burdens at home typical for CUNY students so they may concentrate on their academic success. AMNH serves as the central hub for our faculty and students, who are otherwise dispersed among all five boroughs of the City. For our second cohort, we dramatically improved the application and screening process, implemented a number of tools to evaluate their potential for grad school, and began growing a network of potential hosts for summer internships around NY State and the US. We review these implementations and outcomes, as well as plans for Year 3, when we expect many of our current students to compete for external summer REUs, and after greatly expanding the program reach through a NASA community college initiative.

  19. Exposing medical students to expanding populations

    Directory of Open Access Journals (Sweden)

    Lindenthal JJ


    Full Text Available JJ Lindenthal,1,2 JA DeLisa,3 GF Heinrich,4 WS Calderón Gerstein,5 1Department of Psychiatry, Institute for the Public Understanding of Health and Medicine, 2Department of Physical Medicine and Rehabilitation, New Jersey Medical School, Rutgers University, Newark, NJ, USA; 3Department of Orthopedics and Rehabilitation, University of New Mexico Health Science Center, Albuquerque, NM, USA; 4Department of Preventive Medicine and Community Health, New Jersey Medical School, Rutgers University, Newark, NJ, USA; 5Hospital Nacional Ramiro Prialé, EsSalud, Huancayo, Peru Abstract: Physicians are required to advocate for and counsel patients based on the best science and the interests of the individual while avoiding discrimination, ensuring equal access to health and mental services. Nonetheless, the communication gap between physician and patients has long been observed. To this end, the Institute for the Public Understanding of Health and Medicine of the Rutgers University New Jersey Medical School has expanded its efforts. This report describes two new programs: a legacy lecture series for medical students and an international “experience”, in Huancayo, Peru, for medical students and faculty. The MiniMed outreach program, now in its ninth year and first described in this journal in 2012, was designed to empower the powerless to communicate more effectively with clinicians, thus improving both the effectiveness of the physician–patient relationship and health care outcomes. The approach of the two new programs and their effects on patients, particularly the underserved, and medical students and faculty, are outlined in the following article. Keywords: MiniMed program, equal access, underserved populations, Newark Renaissance House, Kintock Group, role modeling 

  20. AIDSCAP initiative expands prevention efforts for women. (United States)


    By 2000, women will likely comprise 50% of HIV-infected persons worldwide. Women, regardless of number of sexual partners, are especially vulnerable to HIV. One act of intercourse puts women at an 18 times greater risk than men of acquiring HIV. Traditional gender roles denying women the power to protect their own health exacerbate their biological susceptibility to HIV infection. AIDSCAP's Women's Initiative (AWI) aims to secure culturally and gender-sensitive AIDSCAP interventions and strategies and to advance AIDSCAP's leadership role in developing HIV/AIDS prevention models for women. More than 50% of AIDSCAP current projects target women. AWI integrates a broader gender perspective into AIDSCAP's project design, technical assistance, evaluation and monitoring, and policy projects. It has expanded target women's groups beyond the groups traditionally considered at high risk. To date, various AIDSCAP projects have trained and educated about one million women. The Christian Reformed World Relief Committee (CRWRC) is involved in HIV/AIDS prevention activities. Its AIDS and Sexually Transmitted Disease (STD) Health Promotion Prevention Program with Market Women in Senegal targets self-employed market women and urban female youth in Dakar, Kaoloack, and Thies. CRWRC worked with two women's groups to develop a sexual health promotion package with HIV/AIDS and STD IEC (information, education, and communication) materials and has trained 20 facilitators to use the promotion package. It helps the two collaborating groups to develop their organization capacities so they can implement and evaluate sustainable HIV/STD prevention programs. AIDSCAP also supports training of Kenyan family planning provider activities in HIV prevention of the JSI Family Planning Sector Project. It collaborates with the Center of Women Workers in Haiti to provide women factory workers IEC and condoms to promote risk reduction behavior. AWI also conducts research and policy activities (e

  1. Photolithographic Synthesis of High-Density DNA and RNA Arrays on Flexible, Transparent, and Easily Subdivided Plastic Substrates. (United States)

    Holden, Matthew T; Carter, Matthew C D; Wu, Cheng-Hsien; Wolfer, Jamison; Codner, Eric; Sussman, Michael R; Lynn, David M; Smith, Lloyd M


    The photolithographic fabrication of high-density DNA and RNA arrays on flexible and transparent plastic substrates is reported. The substrates are thin sheets of poly(ethylene terephthalate) (PET) coated with cross-linked polymer multilayers that present hydroxyl groups suitable for conventional phosphoramidite-based nucleic acid synthesis. We demonstrate that by modifying array synthesis procedures to accommodate the physical and chemical properties of these materials, it is possible to synthesize plastic-backed oligonucleotide arrays with feature sizes as small as 14 μm × 14 μm and feature densities in excess of 125 000/cm(2), similar to specifications attainable using rigid substrates such as glass or glassy carbon. These plastic-backed arrays are tolerant to a wide range of hybridization temperatures, and improved synthetic procedures are described that enable the fabrication of arrays with sequences up to 50 nucleotides in length. These arrays hybridize with S/N ratios comparable to those fabricated on otherwise identical arrays prepared on glass or glassy carbon. This platform supports the enzymatic synthesis of RNA arrays and proof-of-concept experiments are presented showing that the arrays can be readily subdivided into smaller arrays (or "millichips") using common laboratory-scale laser cutting tools. These results expand the utility of oligonucleotide arrays fabricated on plastic substrates and open the door to new applications for these important bioanalytical tools.

  2. Acoustic Eaton lens array and its fluid application

    CERN Document Server

    Kim, Sang-Hoon; Das, Mukunda P


    A principle of an acoustic Eaton Lens array and its application as a removable tsunami wall is proposed theoretically. The lenses are made of expandable rubber balloons and create a stop-band by the rotating the incoming tsunami wave and reduce the pressure by canceling each other. The diameter of each lens is larger than the wavelength of the tsunami near the coast, that is, order of a kilometer. The impedance matching on the border of the lenses results in little reflection. Before a tsunami, the balloons are buried underground in shallow water near the coast in folded or rounded form. Upon sounding of the tsunami alarm, water and air are pumped into the balloons, which expand and erect the wall above the sea level within a few hours. After the tsunami, the water and air are released from the balloons, which are then buried underground for reuse. Electricity is used to power the entire process.

  3. Large scale biomimetic membrane arrays

    DEFF Research Database (Denmark)

    Hansen, Jesper Søndergaard; Perry, Mark; Vogel, Jörg


    -structured 8 x 8 aperture partition arrays with average aperture diameters of 301 +/- 5 mu m. We addressed the electro-physical properties of the lipid bilayers established across the micro-structured scaffold arrays by controllable reconstitution of biotechnological and physiological relevant membrane...

  4. Automated Solar-Array Assembly (United States)

    Soffa, A.; Bycer, M.


    Large arrays are rapidly assembled from individual solar cells by automated production line developed for NASA's Jet Propulsion Laboratory. Apparatus positions cells within array, attaches interconnection tabs, applies solder flux, and solders interconnections. Cells are placed in either straight or staggered configurations and may be connected either in series or in parallel. Are attached at rate of one every 5 seconds.

  5. Tremor as observed by the Array of Arrays in Cascadia (United States)

    Ghosh, A.; Vidale, J. E.; Creager, K. C.


    We are capturing the intimate details of tremor activity in Cascadia with 8 small-aperture seismic arrays in northwestern Washington. The Array of Arrays (AoA) focuses on the tremor-active megathrust, including the area we previously imaged with a solo seismic array in 2008 [Ghosh et al., GRL, 2009, 2010]. Each array consists of 10 to 20 three-component sensors recording in continuous mode. Since it became operational in June 2009, the AoA has recorded several minor tremor episodes, and the recent episodic tremor and slip (ETS) event in August 2010. During the ETS event, each array was augmented by 10 additional single-channel, vertical-component sensors. We have already started to analyze seismic data for tremor episodes in July 2009, and March 2010. At each array, we apply a beamforming technique to stack the seismic energy at every 0.2 Hz from 2 to 15 Hz. During active tremor, the arrays show stable slowness, and azimuth over time, and up to 15 Hz energy on vertical channels, and 6 Hz on horizontals, with slowness consistent with the P and S waves respectively (Figure 1). Vidale et al. in this meeting provide a detailed description of a weeklong tremor episode in March 2010. The ETS started early second week of August about 60 km south of our arrays, and in a week or so, migrated along-strike to the north passing directly underneath the arrays. Strong tremor is still active about 50 km north of the arrays as we write this abstract. We will imminently analyze this data, and by the time of AGU, have preliminary results to present. Currently, we are developing an algorithm to focus as many arrays as possible to locate the tremor sources. With fine tremor detection capability and good azimuthal coverage, our AoA will better resolve the various confounding features of tremor spatiotemporal distribution (e.g., tremor patches, bands, streaks, rapid tremor reversals, low frequency earthquakes) that have been recently discovered in Cascadia. The AoA is poised to provide

  6. Infrastructure Requirements for an Expanded Fuel Ethanol Industry

    Energy Technology Data Exchange (ETDEWEB)

    Reynolds, Robert E. [Downstream Alternatives, Inc., South Bend, IN (United States)


    This report provides technical information specifically related to ethanol transportation, distribution, and marketing issues. This report required analysis of the infrastructure requirements for an expanded ethanol industry.

  7. Expander Families and Cayley Graphs A Beginner's Guide

    CERN Document Server

    Krebs, Mike


    The theory of expander graphs is a rapidly developing topic in mathematics and computer science, with applications to communication networks, error-correcting codes, cryptography, complexity theory, and much more. Expander Families and Cayley Graphs: A Beginner's Guide is a comprehensive introduction to expander graphs, designed to act as a bridge between classroom study and active research in the field of expanders. It equips those with little or no prior knowledge with the skills necessary to both comprehend current research articles and begin their own research. Central to this book are fou

  8. Using Phased Array for Transverse Oscillation Vector Velocity Imaging

    DEFF Research Database (Denmark)

    Pihl, Michael Johannes; Haugaard, Per; Jensen, Jørgen Arendt

    be expanded to phased arrays enabling vector velocity imaging of the heart. Therefore, the performance of the TO estimator has to be evaluated for depths up to 10-15 cm. Methods The TO method is based on creating a double oscillating field. Flow phantoms were simulated with a transverse (90º) parabolic flow...... profile (peak = 1 m/s) and a vessel radius of 5 mm, and ‘scanned’ orthogonal to the flow with a 3.5 MHz phased array transducer. The performance of the lateral velocity estimates were evaluated by calculating the relative mean bias, Br, and relative mean standard deviation, σr, inside the vessel of N=20...

  9. Digital electrostatic acoustic transducer array

    KAUST Repository

    Carreno, Armando Arpys Arevalo


    In this paper we present the fabrication and characterization of an array of electrostatic acoustic transducers. The array is micromachined on a silicon wafer using standard micro-machining techniques. Each array contains 2n electrostatic transducer membranes, where “n” is the bit number. Every element of the array has a hexagonal membrane shape structure, which is separated from the substrate by 3µm air gap. The membrane is made out 5µm thick polyimide layer that has a bottom gold electrode on the substrate and a gold top electrode on top of the membrane (250nm). The wafer layout design was diced in nine chips with different array configurations, with variation of the membrane dimensions. The device was tested with 90 V giving and sound output level as high as 35dB, while actuating all the elements at the same time.

  10. Chunking of Large Multidimensional Arrays

    Energy Technology Data Exchange (ETDEWEB)

    Rotem, Doron; Otoo, Ekow J.; Seshadri, Sridhar


    Data intensive scientific computations as well on-lineanalytical processing applications as are done on very large datasetsthat are modeled as k-dimensional arrays. The storage organization ofsuch arrays on disks is done by partitioning the large global array intofixed size hyper-rectangular sub-arrays called chunks or tiles that formthe units of data transfer between disk and memory. Typical queriesinvolve the retrieval of sub-arrays in a manner that accesses all chunksthat overlap the query results. An important metric of the storageefficiency is the expected number of chunks retrieved over all suchqueries. The question that immediately arises is "what shapes of arraychunks give the minimum expected number of chunks over a query workload?"In this paper we develop two probabilistic mathematical models of theproblem and provide exact solutions using steepest descent and geometricprogramming methods. Experimental results, using synthetic workloads onreal life data sets, show that our chunking is much more efficient thanthe existing approximate solutions.

  11. Nanocoax Arrays for Sensing Devices (United States)

    Rizal, Binod

    We have adapted a nanocoax array architecture for high sensitivity, all-electronic, chemical and biological sensing. Arrays of nanocoaxes with various dielectric annuli were developed using polymer replicas of Si nanopillars made via soft lithography. These arrays were implemented in the development of two different kinds of chemical detectors. First, arrays of nanocoaxes constructed with different porosity dielectric annuli were employed to make capacitive detectors for gaseous molecules and to investigate the role of dielectric porosity in the sensitivity of the device. Second, arrays of nanocoaxes with partially hollowed annuli were used to fabricate three-dimensional electrochemical biosensors within which we studied the role of nanoscale gap between electrodes on device sensitivity. In addition, we have employed a molecular imprint technique to develop a non-conducting molecularly imprinted polymer thin film of thickness comparable to size of biomolecules as an "artificial antibody" architecture for the detection of biomolecules.

  12. SAQC: SNP Array Quality Control

    Directory of Open Access Journals (Sweden)

    Li Ling-Hui


    Full Text Available Abstract Background Genome-wide single-nucleotide polymorphism (SNP arrays containing hundreds of thousands of SNPs from the human genome have proven useful for studying important human genome questions. Data quality of SNP arrays plays a key role in the accuracy and precision of downstream data analyses. However, good indices for assessing data quality of SNP arrays have not yet been developed. Results We developed new quality indices to measure the quality of SNP arrays and/or DNA samples and investigated their statistical properties. The indices quantify a departure of estimated individual-level allele frequencies (AFs from expected frequencies via standardized distances. The proposed quality indices followed lognormal distributions in several large genomic studies that we empirically evaluated. AF reference data and quality index reference data for different SNP array platforms were established based on samples from various reference populations. Furthermore, a confidence interval method based on the underlying empirical distributions of quality indices was developed to identify poor-quality SNP arrays and/or DNA samples. Analyses of authentic biological data and simulated data show that this new method is sensitive and specific for the detection of poor-quality SNP arrays and/or DNA samples. Conclusions This study introduces new quality indices, establishes references for AFs and quality indices, and develops a detection method for poor-quality SNP arrays and/or DNA samples. We have developed a new computer program that utilizes these methods called SNP Array Quality Control (SAQC. SAQC software is written in R and R-GUI and was developed as a user-friendly tool for the visualization and evaluation of data quality of genome-wide SNP arrays. The program is available online (

  13. Array gain for a cylindrical array with baffle scatter effects. (United States)

    Bertilone, Derek C; Killeen, Damien S; Bao, Chaoying


    Cylindrical arrays used in sonar for passive underwater surveillance often have sensors surrounding a cylindrical metal baffle. In some operational sonars, the phones in each stave (i.e., each line of phones aligned with the cylinder axis) are hardwired together so that the array is equivalent to a baffled circular array of directional elements, where each element corresponds to a line array of omnidirectional phones steered to broadside. In this paper a model is introduced for computing the array gain of such an array at high frequencies, which incorporates baffle scatter using infinite, rigid cylinder scattering theory, and with ambient noise described by an angular spectral density function. In practice the phones are often offset from the baffle surface, and the acoustic field sampled by the staves is distorted at high frequencies due to interference between the incident and scattered fields. Examples are given to illustrate the resulting array gain degradation, using three noise distributions that are frequently used in sonar performance modeling: three-dimensional isotropic, two-dimensional isotropic, and surface dipole noise.

  14. NECTAr: New electronics for the Cherenkov Telescope Array

    Energy Technology Data Exchange (ETDEWEB)

    Vorobiov, S., E-mail: vorobiov@lpta.in2p3.f [LPTA, Universite Montpellier II and IN2P3/CNRS, Montpellier (France); Bolmont, J.; Corona, P. [LPNHE, Universite Paris VI and IN2P3/CNRS, Paris (France); Delagnes, E. [IRFU/DSM/CEA, Saclay, Gif-sur-Yvette (France); Feinstein, F. [LPTA, Universite Montpellier II and IN2P3/CNRS, Montpellier (France); Gascon, D. [ICC-UB, Universitat Barcelona, Barcelona (Spain); Glicenstein, J.-F. [IRFU/DSM/CEA, Saclay, Gif-sur-Yvette (France); Naumann, C.L.; Nayman, P. [LPNHE, Universite Paris VI and IN2P3/CNRS, Paris (France); Sanuy, A. [ICC-UB, Universitat Barcelona, Barcelona (Spain); Toussenel, F.; Vincent, P. [LPNHE, Universite Paris VI and IN2P3/CNRS, Paris (France)


    The European astroparticle physics community aims to design and build the next generation array of Imaging Atmospheric Cherenkov Telescopes (IACTs), that will benefit from the experience of the existing H.E.S.S. and MAGIC detectors, and further expand the very-high energy astronomy domain. In order to gain an order of magnitude in sensitivity in the 10 GeV to >100TeV range, the Cherenkov Telescope Array (CTA) will employ 50-100 mirrors of various sizes equipped with 1000-4000 channels per camera, to be compared with the 6000 channels of the final H.E.S.S. array. A 3-year program, started in 2009, aims to build and test a demonstrator module of a generic CTA camera. We present here the NECTAr design of front-end electronics for the CTA, adapted to the trigger and data acquisition of a large IACTs array, with simple production and maintenance. Cost and camera performances are optimized by maximizing integration of the front-end electronics (amplifiers, fast analog samplers, ADCs) in an ASIC, achieving several GS/s and a few {mu}s readout dead-time. We present preliminary results and extrapolated performances from Monte Carlo simulations.

  15. In vitro comparison of self-expanding versus balloon-expandable stents in a human ex vivo model. (United States)

    Grenacher, Lars; Rohde, Stefan; Gänger, Ellen; Deutsch, Jochen; Kauffmann, Günter W; Richter, Götz M


    The objective was to compare the radial strength and expansile precision of self-expanding stents and balloon-expandable stents in a human cadaver bifurcation model. Seven different self-expanding (LUMINEXX, JOSTENT SelfX, JOSTENT SelfX hrf, Sinus-Repo, Sinus SuperFlex, Easy Wallstent, SMART) and four different balloon-expandable stent models (Palmaz, Sinus Stent, SAXX Medium, JOSTENT peripheral), each type 10 stents (total n = 110 stents) were implanted into the common iliac arteries of human cadaver corpses. The maximum stent diameter was 10 mm for all models. After stent implantation, the specimens were filled with silicone caoutchouc. After 24 h, the vascular walls including the stents were removed from the hardened casts. Diameters were taken and the weight of the cast cylinders was measured in air and in purified water to calculate the volume of the bodies (according to Archimedes Law) as a relative but precise degree for the radial strength of the implanted stents. The cylindrical casts of the self-expanding stents showed lower mean diameters (8.2 +/- 1.0 mm) and mean volumes (0.60 +/- 0.14 ml/cm) than in the balloon-expandable stent group (10.1 +/- 0.3 mm and 0.71 +/- 0.04 ml/cm, respectively; p < 0.01). The nominal maximum diameter of 10 mm was not achieved in any of the self-expanding stents, but this was achieved in more than 70% (29/40) of the balloon-expandable stent specimens (p < 0.05). The variation between achieved volumes was significantly larger in self-expanding (range: 0.23-0.78 ml/cm) than in balloon-expandable stents (range: 0.66-0.81 ml/cm; p < 0.05). Self-expanding stents presented considerably lower radial expansion force and lower degree of precision than balloon-expandable stents.

  16. The Long Wavelength Array (United States)

    Taylor, G. B.


    The Long Wavelength Array (LWA) will be a new, open, user-oriented astronomical instrument operating in the poorly explored window from 20-80 MHz at arcsecond level resolution and mJy level sensitivity. Key science drivers include (1) acceleration, propagation, and turbulence in the ISM, including the space-distribution and spectrum of Galactic cosmic rays, supernova remnants, and pulsars; (2) the high redshift universe, including the most distant radio galaxies and clusters - tools for understanding the earliest black holes and the cosmological evolution of Dark Matter and Dark Energy; (3) planetary, solar, and space science, including space weather prediction and extra-solar planet searches; and (4) the radio transient universe: including the known (e.g., SNe, GRBs) and the unknown. Because the LWA will explore one of the last and least investigated regions of the spectrum, the potential for new discoveries, including new classes of physical phenomena, is high, and there is a strong synergy with exciting new X-ray and Gamma-ray measurements, e.g. for cosmic ray acceleration, transients, and galaxy clusters. Operated by the University of New Mexico on behalf of the South West Consortium (SWC) the LWA will also provide a unique training ground for the next generation of radio astronomers. Students may also put skills learned on the LWA to work in computer science, electrical engineering, and the communications industry, among others. The development of the LWA will follow a phased build, which benefits from lessons learned at each phase. Four university-based Scientific Testing and Evaluation (ST&E) teams with different areas of concentration (1. High resolution imaging and particle acceleration; 2. Wide field imaging and large scale structures; 3. Ionosphere, and 4. RFI suppression and transient detection) will provide the feedback needed to assure that science objectives are met as the build develops. Currently in its first year of construction funding, the LWA

  17. Optimized Volumetric Scanning for X-Ray Array Sources

    Energy Technology Data Exchange (ETDEWEB)

    Lehman, S K; Foudray, A M; Wang, A; Kallman, J S; Martz, H


    Non-destructive evaluation (NDE) is the science and technology of determining non-invasively the internal structure of manufactured parts, objects, and materials. NDE application areas include medicine, industrial manufacturing, military, homeland security, and airport luggage screening. X-ray measurement systems are most widely used because of their ability to image through a wide range of material densities (from human tissue in medical applications to the dense materials of weapon components). Traditional x-ray systems involve a single source and detector system that rotate and/or translate about the object under evaluation. At each angular location, the source projects x-rays through the object. The rays undergo attenuation proportional to the density of the object's constitutive material. The detector records a measure of the attenuation. Mathematical algorithms are used to invert the forward attenuated ray projection process to form images of the object. This is known as computed tomography (CT). In recent years, the single-source x-ray NDE systems have been generalized to arrays of x-ray sources. Array sources permit multiple views of the object with fewer rotations and translations of the source/detector system. The spatially diverse nature of x-ray array sources has the potential of reducing data collection time, reducing imaging artifacts, and increasing the resolution of the resultant images. Most of the existing CT algorithms were not derived from array source models with a spatially diverse set of viewing perspectives. Single-source x-ray CT data collection, processing, and imaging methods and algorithms are not applicable when the source location is expanded from one dimension (a rotating and/or translating point source) to two (a rotating and/or translating array). They must be reformulated. The goal of this project is to determine the applicability of x-ray array sources to problems of interest to LLNL and its customers. It is believed array

  18. Evaluation of methods for oligonucleotide array data via quantitative real-time PCR

    Directory of Open Access Journals (Sweden)

    Morris Daryl E


    Full Text Available Abstract Background There are currently many different methods for processing and summarizing probe-level data from Affymetrix oligonucleotide arrays. It is of great interest to validate these methods and identify those that are most effective. There is no single best way to do this validation, and a variety of approaches is needed. Moreover, gene expression data are collected to answer a variety of scientific questions, and the same method may not be best for all questions. Only a handful of validation studies have been done so far, most of which rely on spike-in datasets and focus on the question of detecting differential expression. Here we seek methods that excel at estimating relative expression. We evaluate methods by identifying those that give the strongest linear association between expression measurements by array and the "gold-standard" assay. Quantitative reverse-transcription polymerase chain reaction (qRT-PCR is generally considered the "gold-standard" assay for measuring gene expression by biologists and is often used to confirm findings from microarray data. Here we use qRT-PCR measurements to validate methods for the components of processing oligo array data: background adjustment, normalization, mismatch adjustment, and probeset summary. An advantage of our approach over spike-in studies is that methods are validated on a real dataset that was collected to address a scientific question. Results We initially identify three of six popular methods that consistently produced the best agreement between oligo array and RT-PCR data for medium- and high-intensity genes. The three methods are generally known as MAS5, gcRMA, and the dChip mismatch mode. For medium- and high-intensity genes, we identified use of data from mismatch probes (as in MAS5 and dChip mismatch and a sequence-based method of background adjustment (as in gcRMA as the most important factors in methods' performances. However, we found poor reliability for methods

  19. The Cherenkov Telescope Array

    CERN Document Server

    Bigongiari, Ciro


    The Cherenkov Telescope Array (CTA) is planned to be the next generation ground based observatory for very high energy (VHE) gamma-ray astronomy. Gamma-rays provide a powerful insight into the non-thermal universe and hopefully a unique probe for new physics. Imaging Cherenkov telescopes have already discovered more than 170 VHE gamma-ray emitters providing plentiful of valuable data and clearly demonstrating the power of this technique. In spite of the impressive results there are indications that the known sources represent only the tip of the iceberg. A major step in sensitivity is needed to increase the number of detected sources, observe short time-scale variability and improve morphological studies of extended sources. An extended energy coverage is advisable to observe far-away extragalactic objects and improve spectral analysis. CTA aims to increase the sensitivity by an order of magnitude compared to current facilities, to extend the accessible gamma-ray energies from a few tens of GeV to a hundred o...

  20. Imaging Properties of Planar Microlens Arrays

    Institute of Scientific and Technical Information of China (English)


    The planar microlens arrays is a two-dimensional array of optical component which is fabricated monolithically available. Imaging properties of planar microlens arrays are described, which provide both image multiplexer and erect, unit magnification images.

  1. An Expanding Locally Anisotropic (ELA) Metric Describing Matter in an Expanding Universe

    CERN Document Server

    Ferreira, P Castelo


    It is suggested an expanding locally anisotropic metric (ELA) ansatz describing matter in a flat expanding universe which interpolates between the Schwarzschild (SC) metric near point-like central bodies of mass 'M' and the Robertson-Walker (RW) metric for large radial coordinate: 'ds^2=Z(cdt)2 - 1/Z (dr1-(Hr1/c) Z^(alpha/2+1/2)(cdt))^2-r1^2 dOmega', where 'Z=1-U' with 'U=2GM/(c^2r1)', 'G' is the Newton constant, 'c' is the speed of light, 'H=H(t)=\\dot(a)/a' is the time-dependent Hubble rate, 'dOmega=dtheta^2+sin^2(theta) dvarphi^2' is the solid angle element, 'a' is the universe scale factor and we are employing the coordinates 'r1=ar', being 'r' the radial coordinate for which the RW metric is diagonal. For constant exponent 'alpha=alpha0=0' it is retrieved the isotropic McVittie (McV) metric and for 'alpha=alpha0=1' it is retrieved the locally anisotropic Cosmological-Schwarzschild (SCS) metric, both already discussed in the literature. However it is shown that only for constant exponent 'alpha=alpha0> 1' ...

  2. Principles of the fifth order tuning of beam expanders

    Energy Technology Data Exchange (ETDEWEB)

    Meot, F.; Aniel, T.


    An analytical treatment of the third and fifth order optics of beam expanders is described, which allows precise tuning of the optical elements of the beam line, and efficient optimization of the beam uniformizing at the extended target. An application to a two-dimensional expander is given as an illustration. (authors). 4 refs.

  3. 47 CFR 69.121 - Connection charges for expanded interconnection. (United States)


    ... 47 Telecommunication 3 2010-10-01 2010-10-01 false Connection charges for expanded interconnection... interconnection. (a) Appropriate connection charge subelements shall be established for the use of equipment and facilities that are associated with offerings of expanded interconnection for special access and...

  4. Expanded Polystyrene Re-Expansion Analysis Following Impact Compression (United States)


    USAARL Report No. 2015-08 Expanded Polystyrene Re-Expansion Analysis Following Impact Compression By Mark S. Adams Frederick Brozoski Katie...13 iv This page is intentionally left blank. 1 Introduction Expanded bead polystyrene (EPS) is widely...EPS energy attenuating liners typically have complex geometric shapes. However, the use of flat sheets of polystyrene facilitated the sample

  5. Expanded HIV Screening Projected to Decrease Spread of the Virus (United States)

    ... NIDA Notes Articles Get this Publication Cite this article APA style citation NIDA (). Expanded HIV Screening Projected To Decrease Spread of the Virus. ... gov/news-events/nida-notes/2014/04/expanded-hiv-screening-projected-to-decrease-spread-virus press ctrl+c to ... Receive NIDA Notes Articles in your Email! Email: You will only receive ...

  6. An Isothermal Steam Expander for an Industrial Steam Supplying System

    Directory of Open Access Journals (Sweden)

    Chen-Kuang Lin


    Full Text Available Steam is an essential medium used in the industrial process. To ensure steam quality, small and middle scale boilers are often adopted. However, because a higher steam pressure (compared to the necessary steam pressure is generated, the boiler’s steam pressure will be reduced via a pressure regulator before the steam is directed through the process. Unfortunately, pressure is somewhat wasted during the reducing process. Therefore, in order to promote energy efficiency, a pressure regulator is replaced by a steam expander. With this steam expander, the pressure will be transformed into mechanical energy and extracted during the expansion process. A new type of isothermal steam expander for an industrial steam supplying system will be presented in the paper. The isothermal steam expander will improve the energy efficiency of a traditional steam expander by replacing the isentropic process with an isothermal expansion process. With this, steam condensation will decrease, energy will increase, and steam quality will be improved. Moreover, the mathematical model of the isothermal steam expander will be established by using the Schmidt theory, the same principle used to analyze Stirling engines. Consequently, by verifying the correctness of the theoretical model for the isothermal steam expander using experimental data, a prototype of 100 c.c. isothermal steam expander is constructed.

  7. Seamless Handovers in Cobra Teardrop Satellite Arrays (United States)

    Draim, John E.; Cefola, Paul J.; Ernandes, Kenneth J.


    Satellite systems provide the most efficient and possibly the only means of achieving two-way global communications with mobile systems (ships, aircraft, and vehicular traffic). To date, such systems have used only circular orbits, either GEO or LEO. Medium altitude elliptical constellations, on the other hand, can provide an efficient and affordable alternative to these architectures. Users also benefit from their very high average and minimum elevation angles, resulting in minimum signal attenuation. Cobra Teardrop is unique in that it employs time synchronized 8-h left- and right-leaning elliptical orbits giving mid-latitude observers the illusion of viewing a single satellite continuously orbiting almost directly overhead! In reality, observers see six different satellites per day, for 4 h each (while in their active duty cycles). By design, Teardrop satellites are physically in very close proximity at the handover points. This favorable geometry can be utilized to achieve a seamless handover from one satellite to the other (not requiring any electronic buffering). Handover is accomplished at the precise instant that the total path lengths from the transmitting station through both satellites to the receiving station are exactly equal. In these improved Cobra Teardrop arrays, an order of magnitude increase in global communications capacity (equivalent GEO slots) can be realized over earlier Basic Cobra systems. For decades into the future, these new orbital systems could satisfy a widely expanding range of commercial, government, and military high data rate communication requirements. These would include, but not be limited to, satellite cellular, air traffic control, meteorological, and combat net radio systems. With these arrays, a much larger number of system operators could be supported, without mutual electronic interference, than would ever be possible with circular orbits.

  8. Antenna arrays a computational approach

    CERN Document Server

    Haupt, Randy L


    This book covers a wide range of antenna array topics that are becoming increasingly important in wireless applications, particularly in design and computer modeling. Signal processing and numerical modeling algorithms are explored, and MATLAB computer codes are provided for many of the design examples. Pictures of antenna arrays and components provided by industry and government sources are presented with explanations of how they work. Antenna Arrays is a valuable reference for practicing engineers and scientists in wireless communications, radar, and remote sensing, and an excellent textbook for advanced antenna courses.

  9. Fiber Optic Geophysics Sensor Array (United States)

    Grochowski, Lucjan


    The distributed optical sensor arrays are analysed in view of specific needs of 3-D seismic explorations methods. There are compared advantages and disadventages of arrays supported by the sensors which are modulated in intensity and phase. In these systems all-fiber optic structures and their compabilities with digital geophysic formats are discussed. It was shown that the arrays based on TDM systems with the intensity modulated sensors are economically and technically the best matched for geophysic systems supported by a large number of the sensors.

  10. Terahertz superconducting plasmonic hole array

    CERN Document Server

    Tian, Zhen; Han, Jiaguang; Gu, Jianqiang; Xing, Qirong; Zhang, Weili


    We demonstrate thermally tunable superconductor hole array with active control over their resonant transmission induced by surface plasmon polaritons . The array was lithographically fabricated on high temperature YBCO superconductor and characterized by terahertz-time domain spectroscopy. We observe a clear transition from the virtual excitation of the surface plasmon mode to the real surface plasmon mode. The highly tunable superconducting plasmonic hole arrays may have promising applications in the design of low-loss, large dynamic range amplitude modulation, and surface plasmon based terahertz devices.

  11. Fundamentals of ultrasonic phased arrays

    CERN Document Server

    Schmerr, Lester W


    This book describes in detail the physical and mathematical foundations of ultrasonic phased array measurements.?The book uses linear systems theory to develop a comprehensive model of the signals and images that can be formed with phased arrays. Engineers working in the field of ultrasonic nondestructive evaluation (NDE) will find in this approach a wealth of information on how to design, optimize and interpret ultrasonic inspections with phased arrays. The fundamentals and models described in the book will also be of significant interest to other fields, including the medical ultrasound and

  12. Plasmon resonances in a stacked pair of graphene ribbon arrays with a lateral displacement. (United States)

    He, Meng-Dong; Zhang, Gui; Liu, Jian-Qiang; Li, Jian-Bo; Wang, Xin-Jun; Huang, Zhen-Rong; Wang, Lingling; Chen, Xiaoshuang


    We find that a stacked pair of graphene ribbon arrays with a lateral displacement can excite plasmon waveguide mode in the gap between ribbons, as well as surface plasmon mode on graphene ribbon surface. When the resonance wavelengthes of plasmon waveguide mode and surface plasmon mode are close to each other, there is a strong electromagnetic interaction between the two modes, and then they contribute together to transmission dip. The plasmon waveguide mode resonance can be manipulated by the lateral displacement and longitudinal interval between arrays due to their influence on the manner and strength of electromagnetic coupling between two arrays. The findings expand our understanding of electromagnetic resonances in graphene-ribbon array structure and may affect further engineering of nanoplasmonic devices and metamaterials.

  13. Fracture characterisation using geoelectric null-arrays (United States)

    Falco, Pierik; Negro, François; Szalai, Sándor; Milnes, Ellen


    The term "geoelectric null-array" is used for direct current electrode configurations yielding a potential difference of zero above a homogeneous half-space. This paper presents a comparative study of the behaviour of three null-arrays, midpoint null-array (MAN), Wenner-γ null-array and Schlumberger null-array in response to a fracture, both in profiling and in azimuthal mode. The main objective is to determine which array(s) best localise fractures or best identify their orientation. Forward modelling of the three null-arrays revealed that the Wenner-γ and Schlumberger null-arrays localise vertical fractures the most accurately, whilst the midpoint null-array combined with the Schlumberger null-array allows accurate orientation of a fracture. Numerical analysis then served as a basis to interpret the field results. Field test measurements were carried out above a quarry in Les Breuleux (Switzerland) with the three null-arrays and classical arrays. The results were cross-validated with quarry-wall geological mapping. In real field circumstances, the Wenner-γ null-array proved to be the most efficient and accurate in localising fractures. The orientations of the fractures according to the numerical results were most efficiently determined with the midpoint null-array, whilst the Schlumberger null-array adds accuracy to the results. This study shows that geoelectrical null-arrays are more suitable than classical arrays for the characterisation of fracture geometry.

  14. Silicon Heat Pipe Array (United States)

    Yee, Karl Y.; Ganapathi, Gani B.; Sunada, Eric T.; Bae, Youngsam; Miller, Jennifer R.; Beinsford, Daniel F.


    Improved methods of heat dissipation are required for modern, high-power density electronic systems. As increased functionality is progressively compacted into decreasing volumes, this need will be exacerbated. High-performance chip power is predicted to increase monotonically and rapidly with time. Systems utilizing these chips are currently reliant upon decades of old cooling technology. Heat pipes offer a solution to this problem. Heat pipes are passive, self-contained, two-phase heat dissipation devices. Heat conducted into the device through a wick structure converts the working fluid into a vapor, which then releases the heat via condensation after being transported away from the heat source. Heat pipes have high thermal conductivities, are inexpensive, and have been utilized in previous space missions. However, the cylindrical geometry of commercial heat pipes is a poor fit to the planar geometries of microelectronic assemblies, the copper that commercial heat pipes are typically constructed of is a poor CTE (coefficient of thermal expansion) match to the semiconductor die utilized in these assemblies, and the functionality and reliability of heat pipes in general is strongly dependent on the orientation of the assembly with respect to the gravity vector. What is needed is a planar, semiconductor-based heat pipe array that can be used for cooling of generic MCM (multichip module) assemblies that can also function in all orientations. Such a structure would not only have applications in the cooling of space electronics, but would have commercial applications as well (e.g. cooling of microprocessors and high-power laser diodes). This technology is an improvement over existing heat pipe designs due to the finer porosity of the wick, which enhances capillary pumping pressure, resulting in greater effective thermal conductivity and performance in any orientation with respect to the gravity vector. In addition, it is constructed of silicon, and thus is better

  15. Distant Supernovae Indicate Ever-Expanding Universe (United States)


    ESO Astronomers Contribute towards Resolution of Cosmic Puzzle Since the discovery of the expansion of the Universe by American astronomer Edwin Hubble in the 1920's, by measurement of galaxy velocities, astronomers have tried to learn how this expansion changes with time. Until now, most scientists have been considering two possibilities: the expansion rate is slowing down and will ultimately either come to a halt - whereafter the Universe would start to contract, or it will continue to expand forever. However, new studies by two independent research teams, based on observations of exploding stars ( supernovae ) by ESO astronomers [1] with astronomical telescopes at the La Silla Observatory as well as those of their colleagues at other institutions, appear to show that the expansion of the Universe is accelerating . The results take the discovery of the cosmological expansion one step further and challenge recent models of the Universe. If the new measurements are indeed correct, they show that the elusive "cosmological constant" , as proposed by Albert Einstein , contributes significantly to the evolution of the Universe. The existence of a non-zero cosmological constant implies that a repulsive force, counter-acting gravity, currently dominates the universal expansion , and consequently leads to an ever-expanding Universe. This new research is being named as the "Breakthrough of the Year" by the renowned US science journal Science in the December 18, 1998, issue. A Press Release is published by the journal on this occasion. "Fundamental Parameters" of the Universe Three fundamental parameters govern all cosmological models based on the theory of General Relativity. They are 1. the current expansion rate as described by Hubble's constant , i.e. the proportionality factor between expansion velocity and distance 2. the average matter density in the Universe, and 3. the amount of "other energy" present in space. From the measured values of these fundamental

  16. Integrated Spatial Filter Array Project (United States)

    National Aeronautics and Space Administration — To address the NASA Earth Science Division need for spatial filter arrays for amplitude and wavefront control, Luminit proposes to develop a novel Integrated Spatial...

  17. The Murchison Widefield Array Correlator

    CERN Document Server

    Ord, S M; Emrich, D; Pallot, D; Wayth, R B; Clark, M A; Tremblay, S E; Arcus, W; Barnes, D; Bell, M; Bernardi, G; Bhat, N D R; Bowman, J D; Briggs, F; Bunton, J D; Cappallo, R J; Corey, B E; Deshpande, A A; deSouza, L; Ewell-Wice, A; Feng, L; Goeke, R; Greenhill, L J; Hazelton, B J; Herne, D; Hewitt, J N; Hindson, L; Hurley-Walker, H; Jacobs, D; Johnston-Hollitt, M; Kaplan, D L; Kasper, J C; Kincaid, B B; Koenig, R; Kratzenberg, E; Kudryavtseva, N; Lenc, E; Lonsdale, C J; Lynch, M J; McKinley, B; McWhirter, S R; Mitchell, D A; Morales, M F; Morgan, E; Oberoi, D; Offringa, A; Pathikulangara, J; Pindor, B; Prabu, T; Procopio, P; Remillard, R A; Riding, J; Rogers, A E E; Roshi, A; Salah, J E; Sault, R J; Shankar, N Udaya; Srivani, K S; Stevens, J; Subrahmanyan, R; Tingay, S J; Waterson, M; Webster, R L; Whitney, A R; Williams, A; Williams, C L; Wyithe, J S B


    The Murchison Widefield Array (MWA) is a Square Kilometre Array (SKA) Precursor. The telescope is located at the Murchison Radio--astronomy Observatory (MRO) in Western Australia (WA). The MWA consists of 4096 dipoles arranged into 128 dual polarisation aperture arrays forming a connected element interferometer that cross-correlates signals from all 256 inputs. A hybrid approach to the correlation task is employed, with some processing stages being performed by bespoke hardware, based on Field Programmable Gate Arrays (FPGAs), and others by Graphics Processing Units (GPUs) housed in general purpose rack mounted servers. The correlation capability required is approximately 8 TFLOPS (Tera FLoating point Operations Per Second). The MWA has commenced operations and the correlator is generating 8.3 TB/day of correlation products, that are subsequently transferred 700 km from the MRO to Perth (WA) in real-time for storage and offline processing. In this paper we outline the correlator design, signal path, and proce...

  18. Next Generation Microshutter Arrays Project (United States)

    National Aeronautics and Space Administration — We propose to develop the next generation MicroShutter Array (MSA) as a multi-object field selector for missions anticipated in the next two decades. For many...

  19. Bolometric Arrays for Millimeter Wavelengths (United States)

    Castillo, E.; Serrano, A.; Torres-Jácome, A.


    During last years, semiconductor bolometers using thin films have been developed at INAOE, specifically boron-doped hydrogenated amorphous silicon films. The characteristics shown by these devices made them attractive to be used in astronomical instrumentation, mainly in two-dimentional arrays. These detector arrays used at the Large Millimeter Telescope will make possible to obtain astronomical images in millimeter and sub-millimeter wavelengths. With this in mind, we are developing a method to produce, with enough reliability, bolometer arrays at INAOE. Until now, silicon nitride diaphragm arrays, useful as radiation absorbers, have succesfully been obtained. Sizes going from one to four millimeter by element in a consistent way; however we have not tested thermometers and metallic contact deposition yet. At the same time, we are working on two possible configurations for the readout electronics; one of them using commercial components while the other will be an integrated circuit specifically designed for this application. Both versions will work below 77K.

  20. Thermopile Area Array Readout Project (United States)

    National Aeronautics and Space Administration — NASA/JPL thermopile detector linear arrays, wire bonded to Black Forest Engineering (BFE) CMOS readout integrated circuits (ROICs), have been utilized in NASA...

  1. CMOS-Based Biosensor Arrays

    CERN Document Server

    Thewes, R; Schienle, M; Hofmann, F; Frey, A; Brederlow, R; Augustyniak, M; Jenkner, M; Eversmann, B; Schindler-Bauer, P; Atzesberger, M; Holzapfl, B; Beer, G; Haneder, T; Hanke, H -C


    CMOS-based sensor array chips provide new and attractive features as compared to today's standard tools for medical, diagnostic, and biotechnical applications. Examples for molecule- and cell-based approaches and related circuit design issues are discussed.

  2. Flexible solar-array mechanism (United States)

    Olson, M. C.


    One of the key elements of the flexible rolled-up solar array system is a mechanism to deploy, retract, and store the flexible solar-cell arrays. The selection of components, the design of the mechanism assembly, and the tests that were performed are discussed. During 6 months in orbit, all mission objectives were satisfied, and inflight performance has shown good correlation with preflight analyses and tests.

  3. Tent Shaped Phased Array Tests. (United States)



  4. Hemocompatibility of titania nanotube arrays. (United States)

    Smith, Barbara S; Yoriya, Sorachon; Grissom, Laura; Grimes, Craig A; Popat, Ketul C


    Hemocompatibility is a key consideration for the long-term success of blood contacting biomaterials; hence, there is a critical need to understand the physiological response elicited from blood/nano-biomaterial interactions. In this study, we have investigated the adsorption of key blood serum proteins, in vitro adhesion and activation of platelets, and clotting kinetics of whole blood on titania nanotube arrays. Previous studies have demonstrated improved mesenchymal stem cell functionality, osteoblast phenotypic behavior, localized drug delivery, and the production of endothelial cell ECM on titania nanotube arrays. Furthermore, these titania nanotube arrays have elicited minimal levels of monocyte activation and cytokine secretion, thus exhibiting a very low degree of immunogenicity. Titania nanotube arrays were fabricated using anodization technique and the surface morphology was examined through scanning electron microscopy (SEM). The crystalline phases were identified using glancing angled X-ray diffraction (GAXRD). Nanoindentation and scratch tests were used to characterize the mechanical properties of titania nanotube arrays. The adsorption of key blood proteins (albumin, fibrinogen, and immunoglobulin-g) was evaluated using a micro-BCA assay and X-ray photoelectron spectroscopy (XPS). The adhesion and activation of platelets was investigated using live-cell staining, MTT assay, and SEM. Whole blood clotting kinetics was evaluated by measuring the free hemoglobin concentration, and SEM was used to visualize the clot formation. Our results indicate increased blood serum protein adsorption, platelet adhesion and activation, and whole blood clotting kinetics on titania nanotube arrays.

  5. Array imaging system for lithography (United States)

    Kirner, Raoul; Mueller, Kevin; Malaurie, Pauline; Vogler, Uwe; Noell, Wilfried; Scharf, Toralf; Voelkel, Reinhard


    We present an integrated array imaging system based on a stack of microlens arrays. The microlens arrays are manufactured by melting resist and reactive ion etching (RIE) technology on 8'' wafers (fused silica) and mounted by wafer-level packaging (WLP)1. The array imaging system is configured for 1X projection (magnification m = +1) of a mask pattern onto a planar wafer. The optical system is based on two symmetric telescopes, thus anti-symmetric wavefront aberrations like coma, distortion, lateral color are minimal. Spherical aberrations are reduced by using microlenses with aspherical lens profiles. In our system design approach, sub-images of individual imaging channels do not overlap to avoid interference. Image superposition is achieved by moving the array imaging system during the exposure time. A tandem Koehler integrator illumination system (MO Exposure Optics) is used for illumination. The angular spectrum of the illumination light underfills the pupils of the imaging channels to avoid crosstalk. We present and discuss results from simulation, mounting and testing of a first prototype of the investigated array imaging system for lithography.

  6. Tissue regeneration during tissue expansion and choosing an expander

    Directory of Open Access Journals (Sweden)

    K Agrawal


    Full Text Available This paper reviews the various aspects of tissue regeneration during the process of tissue expansion. "Creep" and mechanical and biological "stretch" are responsible for expansion. During expansion, the epidermis thickens, the dermis thins out, vascularity improves, significant angiogenesis occurs, hair telogen phase becomes shorter and the peripheral nerves, vessels and muscle fibres lengthen. Expansion is associated with molecular changes in the tissue. Almost all these biological changes are reversible after the removal of the expander.This study is also aimed at reviewing the difficulty in deciding the volume and dimension of the expander for a defect. Basic mathematical formulae and the computer programmes for calculating the dimension of tissue expanders, although available in the literature, are not popular. A user-friendly computer programme based on the easily available Microsoft Excel spread sheet has been introduced. When we feed the area of defect and base dimension of the donor area or tissue expander, this programme calculates the volume and height of the expander. The shape of the expander is decided clinically based on the availability of the donor area and the designing of the future tissue movement. Today, tissue expansion is better understood biologically and mechanically. Clinical judgement remains indispensable in choosing the size and shape of the tissue expander.

  7. Application of unified array calculus to connect 4-D spacetime sensing with string theory and relativity (United States)

    Rauhala, U. A.


    Array algebra of photogrammetry and geodesy unified multi-linear matrix and tensor operators in an expansion of Gaussian adjustment calculus to general matrix inverses and solutions of inverse problems to find all, or some optimal, parametric solutions that satisfy the available observables. By-products in expanding array and tensor calculus to handle redundant observables resulted in general theories of estimation in mathematical statistics and fast transform technology of signal processing. Their applications in gravity modeling and system automation of multi-ray digital image and terrain matching evolved into fast multi-nonlinear differential and integral array calculus. Work since 1980's also uncovered closed-form inverse Taylor and least squares Newton-Raphson-Gauss perturbation solutions of nonlinear systems of equations. Fast nonlinear integral matching of array wavelets enabled an expansion of the bundle adjustment to 4-D stereo imaging and range sensing where real-time stereo sequence and waveform phase matching enabled data-to-info conversion and compression on-board advanced sensors. The resulting unified array calculus of spacetime sensing is applicable in virtually any math and engineering science, including recent work in spacetime physics. The paper focuses on geometric spacetime reconstruction from its image projections inspired by unified relativity and string theories. The collinear imaging equations of active object space shutter of special relativity are expanded to 4-D Lorentz transform. However, regular passive imaging and shutter inside the sensor expands the law of special relativity by a quantum geometric explanation of 4-D photogrammetry. The collinear imaging equations provide common sense explanations to the 10 (and 26) dimensional hyperspace concepts of a purely geometric string theory. The 11-D geometric M-theory is interpreted as a bundle adjustment of spacetime images using 2-D or 5-D membrane observables of image, string and

  8. Optical Transmission Properties of Dielectric Aperture Arrays (United States)

    Yang, Tao

    units (RIU) and a dynamic range as large as 0.17 RIU. Subsequently, optical transmission properties through a self-mixing interferometer array are studied and a novel high-resolution cost-effective optical spectrometer is proposed. The miniature interferometer-based spectrometer is made of polymethyl methacrylate (PMMA) with a CCD as the detector. The detected intensity of each CCD pixels contains the spectral information. Since each frequency component in the incoming beam corresponds to a unique phase difference of the two beam portions of each optical interferometer, the total intensity received by each CCD pixel, which is resulted from the addition of the interference signals from all the frequency components in the beam, should also be unique. Therefore, the spectrum calculation is a problem to solve an ill-posed linear system by using Tikhonov regularization method. Simulation results show that the resolution can reach picometer level. Apart from the choice of path difference between the interfering beams, the spectral resolution also depends on the signal-to-noise ratio and analogue-digital conversion resolution (dynamic range) of the CCD chip. In addition, the theory of uniform waveguide scattering is explored to expand the possibility of using such mini-interferometers for performing free-space spectral analysis of waveguide devices. At the same time, the method of least squares is used to correct the pixel non-uniformity of the CCD so as to improve the performance of the spectrometer. The sensor chip and spectrometer chip introduced here are based on the interference of light transmitted through dielectric aperture arrays. Their compact feature renders these devices ideal for miniaturization and integration as the systems in microfluidics architectures and lab-on-chip designs.

  9. The Submillimeter Array Antennas and Receivers

    CERN Document Server

    Blundell, R


    The Submillimeter Array (SMA) was conceived at the Smithsonian Astrophysical Observatory in 1984 as a six element interferometer to operate in the major atmospheric windows from about 200 to 900 GHz. In 1996, the Academica Sinica Institute of Astronomy and Astrophysics of Taiwan joined the project and agreed to provide additional hardware to expand the interferometer to eight elements. All eight antennas are now operating at the observatory site on Mauna Kea, and astronomical observations have been made in the 230, 345, and 650 GHz bands. The SMA antennas have a diameter of 6 m, a surface accuracy of better than 25 micron rms, and can be reconfigured to provide spatial resolutions down to about 0.5" at 200 GHz and, eventually, 0.1" at 850 GHz. Coupling to the receiver package within each antenna is achieved via a beam waveguide, in a bent Nasmyth configuration, comprised of a flat tertiary mirror and two ellipsoidal mirrors that form a secondary pupil used for receiver calibration. An additional fixed mirror ...

  10. On The Relativity of Redshifts: Does Space Really "Expand"?

    CERN Document Server

    Lewis, Geraint F


    In classes on cosmology, students are often told that photons stretch as space expands, but just how physical is this picture? Does space really expand? In this article, we explore the notion of the redshift of light with Einstein's general theory of relativity, showing that the core underpinning principles reveal that redshifts are both simpler and more complex than you might naively think. This has significant implications for the observed redshifting of photons as they travel across the universe, often refereed to as the cosmological redshift, and for the idea of expanding space.

  11. Acute expanded perlite exposure with persistent reactive airway dysfunction syndrome. (United States)

    Du, Chung-Li; Wang, Jung-Der; Chu, Po-Chin; Guo, Yue-Liang Leon


    Expanded perlite has been assumed as simple nuisance, however during an accidental spill out in Taiwan, among 24 exposed workers followed for more than 6 months, three developed persisted respiratory symptoms and positive provocation tests were compatible with reactive airway dysfunction syndrome. During simulation experiment expanded perlite is shown to be very dusty and greatly exceed current exposure permission level. Review of literature and evidence, though exposure of expanded perlite below permission level may be generally safe, precautionary protection of short term heavy exposure is warranted.

  12. Rupture of an expander prosthesis mimics axillary cancer recurrence.

    LENUS (Irish Health Repository)

    Ismael, T


    Regional silicone gel migration from a ruptured breast implant has been reported at different locations including the upper extremity, chest wall muscles, axilla and back. We report a patient who presented with an axillary mass that mimicked a regional recurrence 5 years after breast cancer reconstruction with a latissimus dorsi musculocutaneous flap and silicon gel expander-prosthesis. Surgical exploration revealed that the mass contained silicone gel around the port of the breast expander that had ruptured. The mass was confluent with an intracapsular silicone leak through a tract along the tube of the expander port.

  13. X-ray Emission from an Expanding Supergiant Shell in IC 2574

    CERN Document Server

    Walter, F; Duric, N; Brinks, E; Klein, U; Walter, Fabian; Duric, Neb; Brinks, Elias; Klein, Uli


    We present a multi--wavelength study of a supergiant shell within the violent interstellar medium of the nearby dwarf galaxy IC 2574, a member of the M81 group of galaxies. Neutral hydrogen (HI) observations obtained with the Very Large Array (VLA) reveal a prominent expanding supergiant HI shell which is thought to be produced by the combined effects of stellar winds and supernova explosions. It measures roughly 1000 x 500 pc in size and is expanding at about 25 km/s. The HI data suggest an age of about 1.4 x 10^6 yrs; the energy input must have been of order (2.6\\pm 1) x 10^53 ergs. Massive star forming regions, as traced by H$\\alpha$ emission, are situated predominantly on the rim of this HI shell. VLA radio continuum observations at 6 cm show that these star-forming regions are the main sources of radio continuum emission in this galaxy. Soft X-ray emission from within the HI hole is detected by a pointed ROSAT PSPC observation. The emission is resolved, coinciding in size and orientation with the HI shel...

  14. An Expanded Conceptual Framework of Medical Students' Primary Care Career Choice. (United States)

    Pfarrwaller, Eva; Audétat, Marie-Claude; Sommer, Johanna; Maisonneuve, Hubert; Bischoff, Thomas; Nendaz, Mathieu; Baroffio, Anne; Junod Perron, Noëlle; Haller, Dagmar M


    In many countries, the number of graduating medical students pursuing a primary care career does not meet demand. These countries face primary care physician shortages. Students' career choices have been widely studied, yet many aspects of this process remain unclear. Conceptual models are useful to plan research and educational interventions in such complex systems.The authors developed a framework of primary care career choice in undergraduate medical education, which expands on previously published models. They used a group-based, iterative approach to find the best way to represent the vast array of influences identified in previous studies, including in a recent systematic review of the literature on interventions to increase the proportion of students choosing a primary care career. In their framework, students enter medical school with their personal characteristics and initial interest in primary care. They complete a process of career decision making, which is subject to multiple interacting influences, both within and outside medical school, throughout their medical education. These influences are stratified into four systems-microsystem, mesosystem, exosystem, and macrosystem-which represent different levels of interaction with students' career choices.This expanded framework provides an updated model to help understand the multiple factors that influence medical students' career choices. It offers a guide for the development of new interventions to increase the proportion of students choosing primary care careers and for further research to better understand the variety of processes involved in this decision.

  15. Fast-Expanding Hi Shells Associated with Supernova Remnants in the I-GALFA Survey (United States)

    Park, Geumsook; Koo, Bon-Chul; Gibson, Steven J.; Kang, Ji-hyun


    We examine excess emission at high positive and negative velocities toward known Galactic supernova remnants (SNRs) in the ``Inner-Galaxy Arecibo L-band Feed Array (I-GALFA)'' Hi 21-cm survey data. The I-GALFA survey covers l = 32° to 77°, and has a velocity range of +/-700 km s-1 with high angular and velocity resolutions (4' and 0.18 km s-1, respectively) and good sensitivity (0.2 K). The excess emission which is thought to be part of a fast-expanding Hi shell of a SNR is detected from four among 39 SNRs in the I-GALFA area: W44, G54.4-0.3, W51C, and CTB 80. Although the Hi shells of the four SNRs were already reported in low-resolution studies, the first detection of both sides of an expanding Hi shell associated with W44 is very inspiring. We discuss physical properties of these four SNRs and their statistical nature.

  16. A Novel Approach to Beam Steering Using Arrays Composed of Multiple Unique Radiating Modes (United States)

    Labadie, Nathan Richard

    Phased array antennas have found wide application in both radar and wireless communications systems particularly as implementation costs continue to decrease. The primary advantages of electronically scanned arrays are speed of beam scan and versatility of beamforming compared to mechanically scanned fixed beam antennas. These benefits come at the cost of a few well known design issues including element pattern rolloff and mutual coupling between elements. Our primary contribution to the field of research is the demonstration of significant improvement in phased array scan performance using multiple unique radiating modes. In short, orthogonal radiating modes have minimal coupling by definition and can also be generated with reduced rolloff at wide scan angles. In this dissertation, we present a combination of analysis, full-wave electromagnetic simulation and measured data to support our claims. The novel folded ring resonator (FRR) antenna is introduced as a wideband and multi-band element embedded in a grounded dielectric substrate. Multiple radiating modes of a small ground plane excited by a four element FRR array were also investigated. A novel hemispherical null steering antenna composed of two collocated radiating elements, each supporting a unique radiating mode, is presented in the context of an anti-jam GPS receiver application. Both the antenna aperture and active feed network were fabricated and measured showing excellent agreement with analytical and simulated data. The concept of using an antenna supporting multiple radiating modes for beam steering is also explored. A 16 element hybrid linear phased array was fabricated and measured demonstrating significantly improved scan range and scanned gain compared to a conventional phased array. This idea is expanded to 2 dimensional scanning arrays by analysis and simulation of a hybrid phased array composed of novel multiple mode monopole on patch antenna sub-arrays. Finally, we fabricated and

  17. Instrumentation for multi-detector arrays

    Indian Academy of Sciences (India)

    R K Bhowmik


    The new generation of detector arrays require complex instrumentation and data acquisition system to ensure increased reliability of operation, high degree of integration, software control and faster data handling capability. The main features of some of the existing multi-detector arrays like MSU 4 array, Gammasphere and Eurogam are summarized. The instrumentation for the proposed INGA array in India is discussed.

  18. The Canonical Expanding Soliton and Harnack inequalities for Ricci flow

    CERN Document Server

    Cabezas-Rivas, Esther


    We introduce the notion of Canonical Expanding Ricci Soliton, and use it to derive new Harnack inequalities for Ricci flow. This viewpoint also gives geometric insight into the existing Harnack inequalities of Hamilton and Brendle.

  19. Massive expanding hematoma of the chin following blunt trauma

    Directory of Open Access Journals (Sweden)

    K Thanvir Mohamed Niazi


    Full Text Available Posttraumatic hematoma of the face is common and usually self-limiting in nature. We report an unusual massive expanding hematoma of the chin within 9 h following a blunt trauma with no associated injuries or fracture.

  20. Expandable Cryogenic Tankage for On Orbit Depot Storage Project (United States)

    National Aeronautics and Space Administration — The proposed expandable depot storage tanks would make it possible to have an on-orbit tank larger in volume than any existing or planned launch vehicles. The size...

  1. Environmental assessment, expanded Ponnequin wind energy project, Weld County, Colorado

    Energy Technology Data Exchange (ETDEWEB)



    The US Department of Energy (DOE) has considered a proposal from the State of Colorado, Office of Energy Conservation (OEC), for funding construction of the Expanded Ponnequin Wind Project in Weld County, Colorado. OEC plans to enter into a contracting arrangement with Public Service Company of Colorado (PSCo) for the completion of these activities. PSCo, along with its subcontractors and business partners, are jointly developing the Expanded Ponnequin Wind Project. The purpose of this Final Environmental Assessment (EA) is to provide DOE and the public with information on potential environmental impacts associated with the Expanded Ponnequin Wind Energy Project. This EA, and public comments received on it, were used in DOE`s deliberations on whether to release funding for the expanded project under the Commercialization Ventures Program.

  2. Outreach Plan : Sherburne National Wildlife Refuge for Expanded Hunting Opportunities (United States)

    US Fish and Wildlife Service, Department of the Interior — This Outreach Plan for Sherburne NWR states that hunting opportunities will be expanded on the Refuge to include wild turkey hunting by disabled and youth hunters.

  3. An expanding locally anisotropic (ELA) metric describing matter in an expanding universe

    Energy Technology Data Exchange (ETDEWEB)

    Castelo Ferreira, P., E-mail: pedro.castelo.ferreira@ist.utl.p [CENTRA-Instituto Superior Tecnico, Av. Rovisco Pais 1, 1100-001 Lisboa (Portugal); U. Lusofona de Humanidades e Tecnologia-Eng. Electrotecnica, Campo Grande 376, 1749-024 Lisboa (Portugal)


    It is suggested an expanding locally anisotropic metric (ELA) ansatz describing matter in a flat expanding universe which interpolates between the Schwarzschild (SC) metric near point-like central bodies of mass M and the Robertson-Walker (RW) metric for large radial coordinate: ds{sup 2}=Zc{sup 2}dt{sup 2}-1/Z (dr{sub 1}-(Hr{sub 1})/c Z{sup (alpha)/2+1/2} cdt){sup 2}-r{sub 1}{sup 2}dOMEGA, where Z=1-U{sub SC} with U{sub SC}=2GM/(c{sup 2}r{sub 1}), G is the Newton constant, c is the speed of light, H=H(t)=a{sup .}/a is the time-dependent Hubble rate, dOMEGA=dtheta{sup 2}+sin{sup 2}thetadphi{sup 2} is the solid angle element, a is the universe scale factor and we are employing the coordinates r{sub 1}=ar, being r the radial coordinate for which the RW metric is diagonal. For constant exponent alpha=alpha{sub 0}=0 it is retrieved the isotropic McVittie (McV) metric and for alpha=alpha{sub 0}=1 it is retrieved the locally anisotropic Cosmological-Schwarzschild (SCS) metric, both already discussed in the literature. However it is shown that only for constant exponent alpha=alpha{sub 0}>1 exists an event horizon at the SC radius r{sub 1}=2GM/c{sup 2} and only for alpha=alpha{sub 0}>=3 space-time is singularity free for this value of the radius. These bounds exclude the previous existing metrics, for which the SC radius is a naked extended singularity. In addition it is shown that for alpha=alpha{sub 0}>5 space-time is approximately Ricci flat in a neighborhood of the event horizon such that the SC metric is a good approximation in this neighborhood. It is further shown that to strictly maintain the SC mass-pole at the origin r{sub 1}=0 without the presence of more severe singularities it is required a radial coordinate-dependent correction to the exponent alpha(r{sub 1})=alpha{sub 0}+alpha{sub 1}2GM/(c{sup 2}r{sub 1}) with a negative coefficient alpha{sub 1}<0. The energy-momentum density, pressures and equation of state are discussed.

  4. Self-Expanding, Tough Biodegradable Elastomers for Wound Stasis (United States)


    the civilian setting, with no effective therapies available at point of injury. We previously reported that a self- expanding polyurethane foam...setting, with no effective therapies available at point of injury. We previously reported that a self-expanding polyurethane foam in accor- dance with the Guide of the Care and Use of Laboratory Ani- mals (Health, 2011 #17). 2.2. Instrumentation and monitoring All swine (n

  5. Twin screw two-phase expanders in large chiller units

    Energy Technology Data Exchange (ETDEWEB)

    Smith, I.K.; Stosic, N.; Aldis, C.A.; Kovacevic, A. [City Univ., Dept. of Mechanical Engineering and Aeronautics, London (United Kingdom)


    An investigation was carried out to determine the feasibility of the use of a twin screw expander as a throttle valve replacement in a 500 ton chiller. The aim was to produce a demonstration unit with an overall machine adiabatic efficiency of not less that 70%. The efficiency target was effectively met but further analytical work is needed to predict mass flow rates reliably and hence the exact machine size required when refrigerant enters the expander as subcooled liquid. (Author)

  6. Wavenumber response of Shanghai Seismic Array

    Institute of Scientific and Technical Information of China (English)


    @@Seismic array can be traced back to 1950s when it mainly aimed at detecting and distinguishing the signals of nuclear explosion and seismic signals. The research on seismic array includes seismic array techniques and applications of array in geophysics. Array techniques involve array design and data processing methods (Anne, 1990). Nowadays, the continuous development of seismic array¢s theory could relate to many scientific issues in geophysical field (Tormod, 1989; Mykkeltveit, Bungum, 1984). Seismic array is mainly applied to detect weak events. The response characteristic of array is an important indication of array¢s detection ability. Therefore, when we study an array or construct an array, one of the neces-sary works is to calculate the response characteristics of the array (Harjes, 1990). The aperture and layout of array are two dominating geometrical features. The typical aperture of interna-tional array is generally from several to tens kilometers. For instance, arrays with aperture of dozens kilometers aperture are KSA, WRA, YKA, etc, while arrays with several kilometer aperture are ARC, FIN, GEE, etc. Moreo-ver, in the view of array¢s layout, NOR, GER, etc have circle layout, while WRA, YKA, etc have decussating layout. This paper mainly discusses the relation between deployment of array and wavenumber response. With the example of constructing Shanghai Seismic Array, this paper provides one practical solution to search the proper array deployment. In this paper, the simple delay beam technique is adopted to calculate the response characteris-tics of array. Certainly, the different processing methods have different result, but the result from the simple delay beam processing could be enough to reflect the feature of an array.

  7. Unsteady Viscous Flow over an Expanding Stretching Cylinder

    Institute of Scientific and Technical Information of China (English)

    方铁钢; 章骥; 钟永芳; 陶华


    We study the viscous How over an expanding stretching cylinder. The solution is exact to the Navier-Stokes equations. The stretching velocity of the cylinder is proportional to the axial distance from the origin and decreases with time. There exists a unique solution for the How with all the studied values of Reynolds number and the unsteadiness parameter. Reversal Hows exist for an expanding stretching cylinder. The velocity decays faster for a larger Reynolds number and a more rapidly expanding cylinder.%We study the viscous flow over an expanding stretching cylinder.The solution is exact to the Navier-Stokes equations.The stretching velocity of the cylinder is proportional to the axial distance from the origin and decreases with time.There exists a unique solution for the flow with all the studied values of Reynolds number and the unsteadiness parameter.Reversal flows exist for an expanding stretching cylinder.The velocity decays faster for a larger Reynolds number and a more rapidly expanding cylinder.

  8. Modeling of phased array transducers. (United States)

    Ahmad, Rais; Kundu, Tribikram; Placko, Dominique


    Phased array transducers are multi-element transducers, where different elements are activated with different time delays. The advantage of these transducers is that no mechanical movement of the transducer is needed to scan an object. Focusing and beam steering is obtained simply by adjusting the time delay. In this paper the DPSM (distributed point source method) is used to model the ultrasonic field generated by a phased array transducer and to study the interaction effect when two phased array transducers are placed in a homogeneous fluid. Earlier investigations modeled the acoustic field for conventional transducers where all transducer points are excited simultaneously. In this research, combining the concepts of delayed firing and the DPSM, the phased array transducers are modeled semi-analytically. In addition to the single transducer modeling the ultrasonic fields from two phased array transducers placed face to face in a fluid medium is also modeled to study the interaction effect. The importance of considering the interaction effect in multiple transducer modeling is discussed, pointing out that neighboring transducers not only act as ultrasonic wave generators but also as scatterers.

  9. Retrieval of Mir Solar Array (United States)

    Rutledge, Sharon K.; deGroh, Kim K.


    A Russian solar array panel removed in November 1997 from the non-articulating photovoltaic array on the Mir core module was returned to Earth on STS-89 in January 1998. The panel had been exposed to low Earth orbit (LEO) for 10 years prior to retrieval. The retrieval provided a unique opportunity to study the effects of the LEO environment on a functional solar array. To take advantage of this opportunity, a team composed of members from RSC-Energia (Russia), the Boeing Company, and the following NASA Centers--Johnson Space Center, Kennedy Space Center, Langley Research Center, Marshall Space Flight Center, and Lewis Research Center--was put together to analyze the array. After post-retrieval inspections at the Spacehab Facility at Kennedy in Florida, the array was shipped to Lewis in Cleveland for electrical performance tests, closeup photodocumentation, and removal of selected solar cells and blanket material. With approval from RSC-Energia, five cell pairs and their accompanying blanket and mesh material, and samples of painted handrail materials were selected for removal on the basis of their ability to provide degradation information. Sites were selected that provided different sizes and shapes of micrometeoroid impacts and different levels of surface contamination. These materials were then distributed among the team for round robin testing.

  10. Mathematical Simulating Model of Phased-Array Antenna in Multifunction Array Radar

    Institute of Scientific and Technical Information of China (English)


    A mathematical simulating model of phased-array antenna in multifunction array radar has been approached in this paper, including the mathematical simulating model of plane phased-array pattern, the mathematical simulating model of directionality factor, the mathematical simulating model of array factor, the mathematical simulating model of array element factor and the mathematical simulating model of beam steering.

  11. Leveraging human genomic information to identify nonhuman primate sequences for expression array development

    Directory of Open Access Journals (Sweden)

    Boyle Nicholas F


    Full Text Available Abstract Background Nonhuman primates (NHPs are essential for biomedical research due to their similarities to humans. The utility of NHPs will be greatly increased by the application of genomics-based approaches such as gene expression profiling. Sequence information from the 3' end of genes is the key resource needed to create oligonucleotide expression arrays. Results We have developed the algorithms and procedures necessary to quickly acquire sequence information from the 3' end of nonhuman primate orthologs of human genes. To accomplish this, we identified terminal exons of over 15,000 human genes by aligning mRNA sequences with genomic sequence. We found the mean length of complete last exons to be approximately 1,400 bp, significantly longer than previous estimates. We designed primers to amplify genomic DNA, which included at least 300 bp of the terminal exon. We cloned and sequenced the PCR products representing over 5,500 Macaca mulatta (rhesus monkey orthologs of human genes. This sequence information has been used to select probes for rhesus gene expression profiling. We have also tested 10 sets of primers with genomic DNA from Macaca fascicularis (Cynomolgus monkey, Papio hamadryas (Baboon, and Chlorocebus aethiops (African green monkey, vervet. The results indicate that the primers developed for this study will be useful for acquiring sequence from the 3' end of genes for other nonhuman primate species. Conclusion This study demonstrates that human genomic DNA sequence can be leveraged to obtain sequence from the 3' end of NHP orthologs and that this sequence can then be used to generate NHP oligonucleotide microarrays. Affymetrix and Agilent used sequences obtained with this approach in the design of their rhesus macaque oligonucleotide microarrays.

  12. Vaginal microbiome and epithelial gene array in post-menopausal women with moderate to severe dryness. (United States)

    Hummelen, Ruben; Macklaim, Jean M; Bisanz, Jordan E; Hammond, Jo-Anne; McMillan, Amy; Vongsa, Rebecca; Koenig, David; Gloor, Gregory B; Reid, Gregor


    After menopause, many women experience vaginal dryness and atrophy of tissue, often attributed to the loss of estrogen. An understudied aspect of vaginal health in women who experience dryness due to atrophy is the role of the resident microbes. It is known that the microbiota has an important role in healthy vaginal homeostasis, including maintaining the pH balance and excluding pathogens. The objectives of this study were twofold: first to identify the microbiome of post-menopausal women with and without vaginal dryness and symptoms of atrophy; and secondly to examine any differences in epithelial gene expression associated with atrophy. The vaginal microbiome of 32 post-menopausal women was profiled using Illumina sequencing of the V6 region of the 16S rRNA gene. Sixteen subjects were selected for follow-up sampling every two weeks for 10 weeks. In addition, 10 epithelial RNA samples (6 healthy and 4 experiencing vaginal dryness) were acquired for gene expression analysis by Affymetrix Human Gene array. The microbiota abundance profiles were relatively stable over 10 weeks compared to previously published data on premenopausal women. There was an inverse correlation between Lactobacillus ratio and dryness and an increased bacterial diversity in women experiencing moderate to severe vaginal dryness. In healthy participants, Lactobacillus iners and L. crispatus were generally the most abundant, countering the long-held view that lactobacilli are absent or depleted in menopause. Vaginal dryness and atrophy were associated with down-regulation of human genes involved in maintenance of epithelial structure and barrier function, while those associated with inflammation were up-regulated consistent with the adverse clinical presentation.

  13. Vaginal microbiome and epithelial gene array in post-menopausal women with moderate to severe dryness.

    Directory of Open Access Journals (Sweden)

    Ruben Hummelen

    Full Text Available After menopause, many women experience vaginal dryness and atrophy of tissue, often attributed to the loss of estrogen. An understudied aspect of vaginal health in women who experience dryness due to atrophy is the role of the resident microbes. It is known that the microbiota has an important role in healthy vaginal homeostasis, including maintaining the pH balance and excluding pathogens. The objectives of this study were twofold: first to identify the microbiome of post-menopausal women with and without vaginal dryness and symptoms of atrophy; and secondly to examine any differences in epithelial gene expression associated with atrophy. The vaginal microbiome of 32 post-menopausal women was profiled using Illumina sequencing of the V6 region of the 16S rRNA gene. Sixteen subjects were selected for follow-up sampling every two weeks for 10 weeks. In addition, 10 epithelial RNA samples (6 healthy and 4 experiencing vaginal dryness were acquired for gene expression analysis by Affymetrix Human Gene array. The microbiota abundance profiles were relatively stable over 10 weeks compared to previously published data on premenopausal women. There was an inverse correlation between Lactobacillus ratio and dryness and an increased bacterial diversity in women experiencing moderate to severe vaginal dryness. In healthy participants, Lactobacillus iners and L. crispatus were generally the most abundant, countering the long-held view that lactobacilli are absent or depleted in menopause. Vaginal dryness and atrophy were associated with down-regulation of human genes involved in maintenance of epithelial structure and barrier function, while those associated with inflammation were up-regulated consistent with the adverse clinical presentation.

  14. Cosmology from CMB polarization with POLARBEAR and the Simons Array (United States)

    Barron, Darcy; POLARBEAR Collaboration


    POLARBEAR is a cosmic microwave background (CMB) polarization experiment located in the Atacama desert in Chile. The science goals of the POLARBEAR project are to do a deep search for CMB B-mode polarization created by inflationary gravitational waves, as well as characterize the CMB B-mode signal from gravitational lensing. POLARBEAR-1 started observations in 2012. The POLARBEAR team has published results from its first season of observations on a small fraction of the sky, including a measurement of a non-zero B-mode polarization angular power spectrum at sub-degree scales, where the dominant signal is gravitational lensing of the CMB. Improving these measurements requires precision characterization of the CMB polarization signal over large fractions of the sky, at multiple frequencies. To achieve these goals, POLARBEAR has begun expanding to include an additional two 3.5 meter telescopes with multi-chroic receivers, known as the Simons Array. With high sensitivity and large sky coverage, the Simons Array will create a detailed survey of B-mode polarization, and its spectral information will be used to extract the CMB signal from astrophysical foregrounds. The Simons Array data will place strong constraints on the sum of the neutrino masses, when combined with data from the next generation of baryon acoustic oscillation measurements. We present the status of this funded instrument and its expected capabilities.

  15. Ground-based Magnetometer Array Science for IHY: Opportunities for an Array in Africa within the UNBSS Developing Nations Small Instrument Program (United States)

    Mann, I. R.; Milling, D. K.; Moldwin, M.; Yizengaw, E.


    Arrays of ground-based magnetometers provide the capability for the meso- and global-scale monitoring of current systems and waves in the coupled magnetosphere-ionosphere system. Recent advances in the processing of multiple time series magnetometer array data allows the inversion of standing Alfven eigenfrequencies for the purposes of monitoring density depletion and refilling dynamics in the plasmasphere, plasmapause and plasmatrough regions. In addition, mid-latitude magnetometer arrays can also allow the monitoring of the ULF waves which are implicated in the transport and acceleration of MeV energy electrons in the radiation belts, as well as monitoring the penetration of asymmetric ring current and substorm current systems to mid- and low-latitudes during storms. Fluxgate magnetometer technology is relatively inexpensive, and the data sets are small allowing relatively easy collection of data through the low-band-width internet connections. However, the accumulation of magnetometer data into nation-, continental- and global-scale array coverage provides a powerful tool for pursuing IHY science objectives. We present examples of how these concepts might be exploited through the UN Developing Nations Small Instrument program with the creation, coordination and operation of an IHY Magnetometer Array (IHYMag). The IHY science focus on storms also ensures that mid-latitude and even equatorial developing nations coverage would ensure IHYMag data is a valuable resource for IHY scientists. African locations offer a prime opportunity to expand the global magnetometer coverage into this region during IHY. Technology being developed for instrument development and data collection for the CARISMA formerly CANOPUS) magnetometer array expansion, including planned use of solar and/or wind turbine power at the remote BACK magnetometer site in the CARISMA array, might also form a basis for the hardware development which could be used to support a Developing Nations Small

  16. 10-kilowatt Photovoltaic Concentrator Array

    Energy Technology Data Exchange (ETDEWEB)

    Donovan, R.L.; Broadbent, S.


    Martin Marietta has designed a Photovoltaic Concentrator Array (PCA) for Sandia Laboratories, Kirtland AFB, New Mexico. The PCA is based on the use of an acrylic Fresnel lens to concentrate sunlight on high intensity solar cells. The objective of the development was to obtain economical photovoltaic power generation by replacing relatively high priced solar cells with low cost lenses. Consequently, a major task of the program was to optimize the design for minimum cost per unit power output. Major design aspects considered for optimization were the concentration ratio, size and shape of the Fresnel lens, array size and shape, structure minimization, tracking and control and the practical aspects of operation and maintenance. In addition to design of the complete array, several porototype photovoltaic concentrator module subassemblies were fabricated and delivered to Sandia for evaluation. These prototypes exceed the 9.0% efficiency requirement established for this program.

  17. Coherent magnetic semiconductor nanodot arrays

    Directory of Open Access Journals (Sweden)

    Xiu Faxian


    Full Text Available Abstract In searching appropriate candidates of magnetic semiconductors compatible with mainstream Si technology for future spintronic devices, extensive attention has been focused on Mn-doped Ge magnetic semiconductors. Up to now, lack of reliable methods to obtain high-quality MnGe nanostructures with a desired shape and a good controllability has been a barrier to make these materials practically applicable for spintronic devices. Here, we report, for the first time, an innovative growth approach to produce self-assembled and coherent magnetic MnGe nanodot arrays with an excellent reproducibility. Magnetotransport experiments reveal that the nanodot arrays possess giant magneto-resistance associated with geometrical effects. The discovery of the MnGe nanodot arrays paves the way towards next-generation high-density magnetic memories and spintronic devices with low-power dissipation.

  18. EHF multifunction phased array antenna (United States)

    Solbach, Klaus


    The design of a low cost demonstration EHF multifunction-phased array antenna is described. Both, the radiating elements and the phase-shifter circuits are realized on microstrip substrate material in order to allow photolithographic batch fabrication. Self-encapsulated beam-lead PIN-diodes are employed as the electronic switch elements to avoid expensive hermetic encapsulation of the semiconductors or complete circuits. A space-feed using a horn-radiator to illuminate the array from the front-side is found to be the simplest and most inexpensive feed. The phased array antenna thus operates as a reflect-array, the antenna elements employed in a dual role for the collection of energy from the feed-horn and for the re-radiation of the phase-shifted waves (in transmit-mode). The antenna is divided into modules containing the radiator/phase-shifter plate plus drive- and BITE-circuitry at the back. Both drive- and BITE-components use gate-array integrated circuits especially designed for the purpose. Several bus-systems are used to supply bias and logical data flows to the modules. The beam-steering unit utilizes several signal processors and high-speed discrete adder circuits to combine the pointing, frequency and beam-shape information from the radar system computer with the stored phase-shift codes for the array elements. Since space, weight and power consumption are prime considerations only the most advanced technology is used in the design of both the microwave and the digital/drive circuitry.

  19. Wicking a confined micropillar array

    CERN Document Server

    Texier, Baptiste Darbois; Stoukatch, Serguei; Dorbolo, Stéphane


    This study considers the spreading of a Newtonian and perfectly wetting liquid in a square array of cylindric micropillars confined between two plates. We show experimentally that the dynamics of the contact line follows a Washburn-like law which depends on the characteristics of the micropillar array (height, diameter and pitch). The presence of pillars can either enhanced or slow down the motion of the contact line. A theoretical model based on capillary and viscous forces has been developed in order to rationalize our observations. Finally, the impact of pillars on the volumic flow rate of liquid which is pumped in the microchannel is inspected.

  20. Highlights from the Telescope Array (United States)

    Matthews, J. N.


    The Telescope Array measures the properties of ultra high energy cosmic ray induced extensive air showers. We do this using a variety of techniques including an array of scintillator detectors to sample the footprint of the air shower when it reaches the Earth's surface and telescopes to measure the fluorescence and Cerenkov light of the air shower. From this we determine the energy spectrum and chemical composition of the primary particles. We also search for sources of cosmic rays and anisotropy. We have found evidence of a possible source of ultra high energy cosmic rays in the northern sky. The experiment and its most recent measurements will be discussed.

  1. Airborne electronically steerable phased array (United States)


    The results are presented of the second stage of a program for the design and development of a phased array capable of simultaneous and separate transmission and reception of radio frequency signals at S-band frequencies. The design goals of this stage were the development of three major areas of interest required for the final prototype model. These areas are the construction and testing of the low-weight, full-scale 128-element array of antenna elements, the development of the RF manifold feed system, and the construction and testing of a working module containing diplexer and transmit and receive circuits.

  2. Substrate integrated antennas and arrays

    CERN Document Server

    Cheng, Yu Jian


    Substrate Integrated Antennas and Arrays provides a single source for cutting-edge information on substrate integrated circuits (SICs), substrate integrated waveguide (SIW) feeding networks, SIW slot array antennas, SIC traveling-wave antennas, SIW feeding antennas, SIW monopulse antennas, and SIW multibeam antennas. Inspired by the author's extensive research, this comprehensive book:Describes a revolutionary SIC-based antenna technique with the potential to replace existing antenna technologiesExamines theoretical and experimental results connected to electrical and mechanical performanceExp

  3. Versatile Flexible Graphene Multielectrode Arrays. (United States)

    Kireev, Dmitry; Seyock, Silke; Ernst, Mathis; Maybeck, Vanessa; Wolfrum, Bernhard; Offenhäusser, Andreas


    Graphene is a promising material possessing features relevant to bioelectronics applications. Graphene microelectrodes (GMEAs), which are fabricated in a dense array on a flexible polyimide substrate, were investigated in this work for their performance via electrical impedance spectroscopy. Biocompatibility and suitability of the GMEAs for extracellular recordings were tested by measuring electrical activities from acute heart tissue and cardiac muscle cells. The recordings show encouraging signal-to-noise ratios of 65 ± 15 for heart tissue recordings and 20 ± 10 for HL-1 cells. Considering the low noise and excellent robustness of the devices, the sensor arrays are suitable for diverse and biologically relevant applications.

  4. Speckle imaging from an array (United States)

    Riker, Jim F.; Tyler, Glenn A.; Vaughn, Jeff L.


    In this paper, we present two analytic theories developed recently to predict the performance of an imaging system composed of a phased array illuminator and a set of receiver subapertures. The receiver need not coincide with the transmitter. The two theories have been documented separately (ref. 1, 2), and the reader can find more details there - the theories present the analytic phased array irradiance on target in the presence of piston errors, and the resulting speckle pattern-induced imaging noise. The principal results presented here are the Signal to Noise Ratios (SNR) for both the radiometric portion of the problem and the speckle imaging portion of the problem.

  5. Phased arrays: inline flow line hub inspection using phased arrays

    NARCIS (Netherlands)

    Bloom, J.G.P.; Chougrani, K.; Rundberg, H.; Oldenziel, G.; Deleye, X.; Martina, Q.


    The feasibility of the inspection of flow line hubs using the phased array technique was investigated to determine the surface area of the seal area degraded by corrosion. A clean model of the hub was simulated to gain insight into the geometrical echoes and to determine the area covered by the ultr

  6. Theoretically Founded Optimization of Auctioneer's Revenues in Expanding Auctions (United States)

    Rabin, Jonathan; Shehory, Onn

    The expanding auction is a multi-unit auction which provides the auctioneer with control over the outcome of the auction by means of dynamically adding items for sale. Previous research on the expanding auction has provided a numeric method to calculate a strategy that optimizes the auctioneer's revenue. In this paper, we analyze various theoretical properties of the expanding auction, and compare it to VCG, a multi-unit auction protocol known in the art. We examine the effects of errors in the auctioneer's estimation of the buyers' maximal bidding values and prove a theoretical bound on the ratio between the revenue yielded by the Informed Decision Strategy (IDS) and the post-optimal strategy. We also analyze the relationship between the auction step and the optimal revenue and introduce a method of computing this optimizing step. We further compare the revenues yielded by the use of IDS with an expanding auction to those of the VCG mechanism and determine the conditions under which the former outperforms the latter. Our work provides new insight into the properties of the expanding auction. It further provides theoretically founded means for optimizing the revenue of auctioneer.

  7. The technique of sand control with expandable screens

    Energy Technology Data Exchange (ETDEWEB)

    Zhao, P. [Petrochina, Liaohe (China). Liaohe Oilfield Co.


    Sand production in heavy oil reservoirs can limit the normal production of oil wells. In this study, expandable screens were used as a sand control mechanism by filtering the sand as it entered the wellbore. The screen systems consists of an expandable outer housing, an expandable base pipe and a filtering layer. The screen expands radially through an expandable cone and presses into the casing well. Axial tension is used to shrink the screens radially through a fishing anchor in order to remove them from the well. The lack of a sand ring between the screen and the casing increases the flow area of the oil and reduces flow resistance caused by fine silt blockages. A series of laboratory experiments were conducted to study the expansion and shrinkage properties of the screens. A field test conducted at a well located in the Liaohe oilfield in China demonstrated that good sand control results can be obtained without the need for pump checking. It was concluded that the sand control method is easy to use and provides good sand control results in large open flow areas. 2 refs., 2 tabs., 3 figs.

  8. Numerical simulation of a twin screw expander for performance prediction (United States)

    Papes, Iva; Degroote, Joris; Vierendeels, Jan


    With the increasing use of twin screw expanders in waste heat recovery applications, the performance prediction of these machines plays an important role. This paper presents a mathematical model for calculating the performance of a twin screw expander. From the mass and energy conservation laws, differential equations are derived which are then solved together with the appropriate Equation of State in the instantaneous control volumes. Different flow processes that occur inside the screw expander such as filling (accompanied by a substantial pressure loss) and leakage flows through the clearances are accounted for in the model. The mathematical model employs all geometrical parameters such as chamber volume, suction and leakage areas. With R245fa as working fluid, the Aungier Redlich-Kwong Equation of State has been used in order to include real gas effects. To calculate the mass flow rates through the leakage paths formed inside the screw expander, flow coefficients are considered as constant and they are derived from 3D Computational Fluid Dynamic calculations at given working conditions and applied to all other working conditions. The outcome of the mathematical model is the P-V indicator diagram which is compared to CFD results of the same twin screw expander. Since CFD calculations require significant computational time, developed mathematical model can be used for the faster performance prediction.

  9. Strength analysis of expandable tubulars for well applications

    Energy Technology Data Exchange (ETDEWEB)

    Aguiar, A.C.C. [Universidade Federal do Rio de Janeiro (UFRJ), RJ (Brazil); Fonseca, C.E. [PETROBRAS S.A., Rio de Janeiro, RJ (Brazil); Netto, T.A. [Universidade Federal do Rio de Janeiro (UFRJ), RJ (Brazil). Coordenacao dos Programas de Pos-graduacao de Engenharia (COPPE)


    Solid expandable tube technology has many advantages when compared to conventional wells. The expansion of tubes in situ allows developing reserves in many of the challenging scenarios found in oil industry, as pre-salt layer, HPHT wells, deep reservoirs, or ultra-deep water. Besides, this procedure has good compatibility with directional and horizontal wells and facilitates side-tracks operations. Although the expansion of tubes is very attractive, a better understanding of its influence on the tube mechanical strength is necessary. In this work, experimental tests and numerical analyses were performed in order to determine the effect of parameters such as diameter-to-thickness ratio and expansion rate on the collapse resistance of expandable tubes. An experimental apparatus was designed and built to reproduce full-scale tube expansion. Three 2 meter long specimens were expanded 10% their original diameters and subjected to hydrostatic pressure inside a vessel until collapse. Three non-expanded tubes were also tested for comparison. At the same time, non-linear numerical models were developed using the finite element method. After calibration, they were used to further analyze the mechanical behavior of solid expandable tubes and the influence of expansion on its resistance against collapse. (author)

  10. Self-expanding/shrinking structures by 4D printing (United States)

    Bodaghi, M.; Damanpack, A. R.; Liao, W. H.


    The aim of this paper is to create adaptive structures capable of self-expanding and self-shrinking by means of four-dimensional printing technology. An actuator unit is designed and fabricated directly by printing fibers of shape memory polymers (SMPs) in flexible beams with different arrangements. Experiments are conducted to determine thermo-mechanical material properties of the fabricated part revealing that the printing process introduced a strong anisotropy into the printed parts. The feasibility of the actuator unit with self-expanding and self-shrinking features is demonstrated experimentally. A phenomenological constitutive model together with analytical closed-form solutions are developed to replicate thermo-mechanical behaviors of SMPs. Governing equations of equilibrium are developed for printed structures based on the non-linear Green-Lagrange strain tensor and solved implementing a finite element method along with an iterative incremental Newton-Raphson scheme. The material-structural model is then applied to digitally design and print SMP adaptive lattices in planar and tubular shapes comprising a periodic arrangement of SMP actuator units that expand and then recover their original shape automatically. Numerical and experimental results reveal that the proposed planar lattice as meta-materials can be employed for plane actuators with self-expanding/shrinking features or as structural switches providing two different dynamic characteristics. It is also shown that the proposed tubular lattice with a self-expanding/shrinking mechanism can serve as tubular stents and grippers for bio-medical or piping applications.

  11. Non-ergodicity for $C^{1}$ Expanding Maps

    CERN Document Server

    Quas, A N


    In this paper, we consider the question of existence and uniqueness of absolutely continuous invariant measures for expanding $C^1$ maps of the circle. This is a question which arises naturally from results which are known in the case of expanding $C^k$ maps of the circle where $k\\geq 2$, or even $C^{1+\\epsilon}$ expanding maps of the circle. In these cases, it is known that there exists a unique absolutely continuous invariant probability measure by the so-called `Folklore Theorem'. It follows that this measure is ergodic. It has been shown however that for $C^1$ maps there need not be any such measure. However, this leaves the question of whether there can be more than one such measure for $C^1$ expanding maps of the circle. This is the subject of this paper, and in it, we show that there exists a $C^1$ expanding map of the circle which has more than one absolutely continuous invariant probability measure.

  12. Study of stacked microstrip phased arrays (United States)

    Arts, M. J.; Smolders, A. B.


    Two theoretical methods for studying stacked-patch microstrip phased arrays are compared: (1) the element-by-element approach (finite array approach) of Pozar (1986) and Smolders (1992); and (2) the infinite approach of Pozar and Shaubert (1984) and Liu et al. (1988). Both theories were found to give almost the same results for a 7 x 7 stacked microstrip antenna, except for edge array elements and for large scan angles. Edge array elements could only be analyzed properly by using a finite array approach. Coupling measurements were made on a 7 x 7 array with a single patch layer, and the results agreed well with calculations.

  13. TANGO Array. 1. The instrument

    Energy Technology Data Exchange (ETDEWEB)

    Bauleo, P. E-mail:; Bonifazi, C.; Filevich, A.; Reguera, A


    TANGO Array is an air shower experiment which has been constructed in Buenos Aires, Argentina. It was commissioned during the year 2000 becoming fully operational in September, 2000. The array consists of four water Cherenkov detectors enclosing a geometrical area of {approx}30,000 m{sup 2} and its design has been optimized for the observation of Extended Air Showers produced by cosmic rays near the 'knee' energy region {approx}4x10{sup 15} eV. Three of the detectors have been constructed using 12,000-l stainless-steel tanks, and the fourth has been mounted in a smaller, 400-l plastic container. The detectors are connected by cables to the data acquisition room, where a very simple system, which takes advantage of the features of a four-channel digital oscilloscope, was set for data collection. This data collection setup allows a fully automatic experiment control which does not require operator intervention. It includes monitoring, data logging, and daily calibration of all detectors. This paper describes the detectors and their associated electronics, and details are given on the data acquisition system, the triggering and calibration procedures, and the operation of the array. Examples of air shower traces, recorded by the array, are presented.

  14. TANGO Array.. 1. The instrument (United States)

    Bauleo, P.; Bonifazi, C.; Filevich, A.; Reguera, A.


    TANGO Array is an air shower experiment which has been constructed in Buenos Aires, Argentina. It was commissioned during the year 2000 becoming fully operational in September, 2000. The array consists of four water Cherenkov detectors enclosing a geometrical area of ˜30,000 m2 and its design has been optimized for the observation of Extended Air Showers produced by cosmic rays near the "knee" energy region ˜4×10 15 eV. Three of the detectors have been constructed using 12,000-l stainless-steel tanks, and the fourth has been mounted in a smaller, 400-l plastic container. The detectors are connected by cables to the data acquisition room, where a very simple system, which takes advantage of the features of a four-channel digital oscilloscope, was set for data collection. This data collection setup allows a fully automatic experiment control which does not require operator intervention. It includes monitoring, data logging, and daily calibration of all detectors. This paper describes the detectors and their associated electronics, and details are given on the data acquisition system, the triggering and calibration procedures, and the operation of the array. Examples of air shower traces, recorded by the array, are presented.

  15. Directivity of basic linear arrays

    DEFF Research Database (Denmark)

    Bach, Henning


    For a linear uniform array ofnelements, an expression is derived for the directivity as a function of the spacing and the phase constants. The cases of isotropic elements, collinear short dipoles, and parallel short dipoles are included. The formula obtained is discussed in some detail and contour...

  16. Photoelectrochemistry of Semiconductor Nanowire Arrays

    Energy Technology Data Exchange (ETDEWEB)

    Mallouk, Thomas E; Redwing, Joan M


    This project supported research on the growth and photoelectrochemical characterization of semiconductor nanowire arrays, and on the development of catalytic materials for visible light water splitting to produce hydrogen and oxygen. Silicon nanowires were grown in the pores of anodic aluminum oxide films by the vapor-liquid-solid technique and were characterized electrochemically. Because adventitious doping from the membrane led to high dark currents, silicon nanowire arrays were then grown on silicon substrates. The dependence of the dark current and photovoltage on preparation techniques, wire diameter, and defect density was studied for both p-silicon and p-indium phosphide nanowire arrays. The open circuit photovoltage of liquid junction cells increased with increasing wire diameter, reaching 350 mV for micron-diameter silicon wires. Liquid junction and radial p-n junction solar cells were fabricated from silicon nano- and microwire arrays and tested. Iridium oxide cluster catalysts stabilized by bidentate malonate and succinate ligands were also made and studied for the water oxidation reaction. Highlights of this project included the first papers on silicon and indium phosphide nanowire solar cells, and a new procedure for making ligand-stabilized water oxidation catalysts that can be covalently linked to molecular photosensitizers or electrode surfaces.


    Directory of Open Access Journals (Sweden)

    E. Castillo


    Full Text Available During last years, semiconductor bolometers using thin lms have been developed at INAOE, speci cally boron-doped hydrogenated amorphous silicon lms. The characteristics shown by these devices made them attractive to be used in astronomical instrumentation, mainly in two-dimentional arrays. These detector arrays used at the Large Millimeter Telescope will make possible to obtain astronomical images in millimeter and submillimeter wavelengths. With this in mind, we are developing a method to produce, with enough reliability, bolometer arrays at INAOE. Until now, silicon nitride diaphragm arrays, useful as radiation absorbers, have succesfully been obtained. Sizes going from one to four millimeter by element in a consistent way; however we have not tested thermometers and metallic contact deposition yet. At the same time, we are working on two possible con gurations for the readout electronics; one of them using commercial components while the other will be an integrated circuit speci cally designed for this application. Both versions will work below 77K.

  18. The Murchison Widefield Array Correlator (United States)

    Ord, S. M.; Crosse, B.; Emrich, D.; Pallot, D.; Wayth, R. B.; Clark, M. A.; Tremblay, S. E.; Arcus, W.; Barnes, D.; Bell, M.; Bernardi, G.; Bhat, N. D. R.; Bowman, J. D.; Briggs, F.; Bunton, J. D.; Cappallo, R. J.; Corey, B. E.; Deshpande, A. A.; deSouza, L.; Ewell-Wice, A.; Feng, L.; Goeke, R.; Greenhill, L. J.; Hazelton, B. J.; Herne, D.; Hewitt, J. N.; Hindson, L.; Hurley-Walker, N.; Jacobs, D.; Johnston-Hollitt, M.; Kaplan, D. L.; Kasper, J. C.; Kincaid, B. B.; Koenig, R.; Kratzenberg, E.; Kudryavtseva, N.; Lenc, E.; Lonsdale, C. J.; Lynch, M. J.; McKinley, B.; McWhirter, S. R.; Mitchell, D. A.; Morales, M. F.; Morgan, E.; Oberoi, D.; Offringa, A.; Pathikulangara, J.; Pindor, B.; Prabu, T.; Procopio, P.; Remillard, R. A.; Riding, J.; Rogers, A. E. E.; Roshi, A.; Salah, J. E.; Sault, R. J.; Udaya Shankar, N.; Srivani, K. S.; Stevens, J.; Subrahmanyan, R.; Tingay, S. J.; Waterson, M.; Webster, R. L.; Whitney, A. R.; Williams, A.; Williams, C. L.; Wyithe, J. S. B.


    The Murchison Widefield Array is a Square Kilometre Array Precursor. The telescope is located at the Murchison Radio-astronomy Observatory in Western Australia. The MWA consists of 4 096 dipoles arranged into 128 dual polarisation aperture arrays forming a connected element interferometer that cross-correlates signals from all 256 inputs. A hybrid approach to the correlation task is employed, with some processing stages being performed by bespoke hardware, based on Field Programmable Gate Arrays, and others by Graphics Processing Units housed in general purpose rack mounted servers. The correlation capability required is approximately 8 tera floating point operations per second. The MWA has commenced operations and the correlator is generating 8.3 TB day-1 of correlation products, that are subsequently transferred 700 km from the MRO to Perth (WA) in real-time for storage and offline processing. In this paper, we outline the correlator design, signal path, and processing elements and present the data format for the internal and external interfaces.

  19. GRIFFIN's Fast-Timing Array (United States)

    Olaizola, Bruno; Griffin Collaboration


    The Gamma-Ray Infrastructure For Fundamental Investigations of Nuclei (GRIFFIN) is the new β-decay spectrometer facility at TRIUMF-ISAC. Consists of an array of 16 large-volume HPGe clover detectors with an unparalleled efficiency of 19% at 1.33 MeV. Its strongest advantage is the versatility of the ancillary detectors that can be coupled to the main array to tag on β particles, neutrons or precisely measure conversion electron spectra. An ancillary array of 8 LaBr3(Ce) detectors for γ-rays and a fast plastic scintillator for β-particles has been optimized for fast-timing experiments with GRIFFIN. The 51 mm x 51 mm cylindrical LaBr3(Ce) crystals are coupled to Hamamatsu R2083 photomultipliers. Timing resolutions as good as FWHM 200 ps and time-walks below +/- 30 ps have been obtained for individual crystals using analog electronics. There is also an ongoing project to develop an active BGO shield for the LaBr3(Ce) crystals. The LaBr3(Ce) array commissioning experiment to measure the 145,146Cs decay to 145,146Ba will test its capabilities over a wide range of lifetimes. Preliminary results on the lifetimes of some of the low-laying states will be presented.

  20. High density arrays of micromirrors

    Energy Technology Data Exchange (ETDEWEB)

    Folta, J. M. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Decker, J. Y. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Kolman, J. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Lee, C. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Brase, J. M. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)


    We established and achieved our goal to (1) fabricate and evaluate test structures based on the micromirror design optimized for maskless lithography applications, (2) perform system analysis and code development for the maskless lithography concept, and (3) identify specifications for micromirror arrays (MMAs) for LLNL's adaptive optics (AO) applications and conceptualize new devices.

  1. Generating and controlling homogeneous air turbulence using random jet arrays (United States)

    Carter, Douglas; Petersen, Alec; Amili, Omid; Coletti, Filippo


    The use of random jet arrays, already employed in water tank facilities to generate zero-mean-flow homogeneous turbulence, is extended to air as a working fluid. A novel facility is introduced that uses two facing arrays of individually controlled jets (256 in total) to force steady homogeneous turbulence with negligible mean flow, shear, and strain. Quasi-synthetic jet pumps are created by expanding pressurized air through small straight nozzles and are actuated by fast-response low-voltage solenoid valves. Velocity fields, two-point correlations, energy spectra, and second-order structure functions are obtained from 2D PIV and are used to characterize the turbulence from the integral-to-the Kolmogorov scales. Several metrics are defined to quantify how well zero-mean-flow homogeneous turbulence is approximated for a wide range of forcing and geometric parameters. With increasing jet firing time duration, both the velocity fluctuations and the integral length scales are augmented and therefore the Reynolds number is increased. We reach a Taylor-microscale Reynolds number of 470, a large-scale Reynolds number of 74,000, and an integral-to-Kolmogorov length scale ratio of 680. The volume of the present homogeneous turbulence, the largest reported to date in a zero-mean-flow facility, is much larger than the integral length scale, allowing for the natural development of the energy cascade. The turbulence is found to be anisotropic irrespective of the distance between the jet arrays. Fine grids placed in front of the jets are effective at modulating the turbulence, reducing both velocity fluctuations and integral scales. Varying the jet-to-jet spacing within each array has no effect on the integral length scale, suggesting that this is dictated by the length scale of the jets.

  2. Advanced Rainbow Solar Photovoltaic Arrays (United States)

    Mardesich, Nick; Shields, Virgil


    Photovoltaic arrays of the rainbow type, equipped with light-concentrator and spectral-beam-splitter optics, have been investigated in a continuing effort to develop lightweight, high-efficiency solar electric power sources. This investigation has contributed to a revival of the concept of the rainbow photovoltaic array, which originated in the 1950s but proved unrealistic at that time because the selection of solar photovoltaic cells was too limited. Advances in the art of photovoltaic cells since that time have rendered the concept more realistic, thereby prompting the present development effort. A rainbow photovoltaic array comprises side-by-side strings of series-connected photovoltaic cells. The cells in each string have the same bandgap, which differs from the bandgaps of the other strings. Hence, each string operates most efficiently in a unique wavelength band determined by its bandgap. To obtain maximum energy-conversion efficiency and to minimize the size and weight of the array for a given sunlight input aperture, the sunlight incident on the aperture is concentrated, then spectrally dispersed onto the photovoltaic array plane, whereon each string of cells is positioned to intercept the light in its wavelength band of most efficient operation. The number of cells in each string is chosen so that the output potentials of all the strings are the same; this makes it possible to connect the strings together in parallel to maximize the output current of the array. According to the original rainbow photovoltaic concept, the concentrated sunlight was to be split into multiple beams by use of an array of dichroic filters designed so that each beam would contain light in one of the desired wavelength bands. The concept has since been modified to provide for dispersion of the spectrum by use of adjacent prisms. A proposal for an advanced version calls for a unitary concentrator/ spectral-beam-splitter optic in the form of a parabolic curved Fresnel-like prism

  3. Sea Level Enigmatic Rising - New Perspectives from an Expanding Globe

    CERN Document Server

    Scalera, Giancarlo


    In the expanding Earth framework it is possible to find additional phenomena that could contribute in a proper way to the water balance and general tectonic eustatism involved in the sea lever rising. Recent compilations seems to leave unexplained up to 12 cm/century of sea rising, and possible solutions invoking a polar ice shells melting near to the upper limit of the error bars reveal in conflict with the consequent expected decreasing of the Earth angular velocity. It is shown that taking into account possible effects of an expanding Earth, the problem can be initiated towards an appropriate solution, at least as regards the just orders of magnitude. Major effects on sea-level could come from ongoing relaxation of curvature variations that are peculiar for an expanding globe.

  4. An Expanded CAG Repeat in Huntingtin Causes +1 Frameshifting. (United States)

    Saffert, Paul; Adamla, Frauke; Schieweck, Rico; Atkins, John F; Ignatova, Zoya


    Maintenance of triplet decoding is crucial for the expression of functional protein because deviations either into the -1 or +1 reading frames are often non-functional. We report here that expression of huntingtin (Htt) exon 1 with expanded CAG repeats, implicated in Huntington pathology, undergoes a sporadic +1 frameshift to generate from the CAG repeat a trans-frame AGC repeat-encoded product. This +1 recoding is exclusively detected in pathological Htt variants, i.e. those with expanded repeats with more than 35 consecutive CAG codons. An atypical +1 shift site, UUC C at the 5' end of CAG repeats, which has some resemblance to the influenza A virus shift site, triggers the +1 frameshifting and is enhanced by the increased propensity of the expanded CAG repeats to form a stem-loop structure. The +1 trans-frame-encoded product can directly influence the aggregation of the parental Htt exon 1.

  5. Synchronization for an array of neural networks with hybrid coupling by a novel pinning control strategy. (United States)

    Gong, Dawei; Lewis, Frank L; Wang, Liping; Xu, Ke


    In this paper, a novel pinning synchronization (synchronization with pinning control) scheme for an array of neural networks with hybrid coupling is investigated. The main contributions are as follows: (1) A novel pinning control strategy is proposed for the first time. Pinning control schemes are introduced as an array of column vector. The controllers are designed as simple linear systems, which are easy to be analyzed or tested. (2) Augmented Lyapunov-Krasovskii functional (LKF) is applied to introduce more relax variables, which can alleviate the requirements of the positive definiteness of the matrix. (3) Based on the appropriate LKF, by introducing some free weighting matrices, some novel synchronization criteria are derived. Furthermore, the proposed pinning control scheme described by column vector can also be expanded to almost all the other array of neural networks. Finally, numerical examples are provided to show the effectiveness of the proposed results.

  6. On the Propagation of Light in an Expanding Universe

    Directory of Open Access Journals (Sweden)

    Yuri Heymann


    Full Text Available The equation of the propagation of light in an expanding Universe is derived based on the definition of comoving distances. A numerical method is proposed to solve this equation jointly with the Friedmann equation. As the equation of the propagation of light in an expanding Universe defines a horizon of the visible Universe, this puts a constraint on cosmological models in order to be consistent with an upper limit for redshifts observed from galaxies. This puzzle is challenging current expansionist cosmological models.

  7. Sound absorption study of raw and expanded particulate vermiculites (United States)

    Vašina, Martin; Plachá, Daniela; Mikeska, Marcel; Hružík, Lumír; Martynková, Gražyna Simha


    Expanded and raw vermiculite minerals were studied for their ability to absorb sound. Phase and structural characterization of the investigated vermiculites was found similar for both types, while morphology and surface properties vary. Sound waves reflect in wedge-like structure and get minimized, and later are absorbed totally. We found that thanks to porous character of expanded vermiculite the principle of absorption of sound into layered vermiculite morphology is analogous to principle of sound minimization in "anechoic chambers." It was found in this study that the best sound damping properties of the investigated vermiculites were in general obtained at higher powder bed heights and higher excitation frequencies.

  8. 3D CFD analysis of a twin screw expander


    Kovacevic, A.; S Rane


    Twin screw machines can be used as expanders for variety of applications. This paper describes how the performance of an oil free twin screw air expander of 3/5 lobe configuration was estimated by use of full 3D Computational Fluid Dynamics (CFD) applying a procedure similar to that used for screw compressors. The grid generator SCORG© was employed for pre-processing of the moving domains between the rotors while the stationary grids for the ports were derived from a commercial grid generator...

  9. Expanding and nonexpanding conformal wormholes, in scalar-tensor theory (United States)

    Dogru, Melis Ulu; Yilmaz, Ihsan


    We study spherically symmetric spacetime with anisotropic fluid in the scalar-tensor theory of gravity based on Lyra geometry. We suggest two different solutions of field equations for the theory by using Casimir effect. Obtained static and nonstatic solutions are similar to nonexpanding Lorentzian wormhole and expanding FRW-type wormhole, respectively. Furthermore, we study singularities of obtained solutions. We emphasize whether the expanding and nonexpanding wormholes conform with Big Rip or Big Crunch scenarios. Also, physical and geometrical properties of the solutions have been discussed.

  10. Uniformly expanding vacuum: A possible interpretation of the dark energy (United States)

    Huang, Peng; Yuan, Fang-Fang


    Following the spirit of the equivalence principle, we take a step further to recognize the free fall of the observer as a method to eliminate causes that would lead the perceived vacuum to change its original state. Thus, it is expected that the vacuum should be in a rigid Minkowski state or be uniformly expanding. By carefully investigating the impact on measurement caused by the expansion, we clarify the exact meaning of the uniformly expanding vacuum and find that this proposal may be able to explain the current observations of an accelerating universe.

  11. Supercooling of rapidly expanding quark-gluon plasma

    CERN Document Server

    Zabrodin, E E; Csernai, László P; Stöcker, H; Greiner, W


    We reexamine the scenario of homogeneous nucleation of the quark-gluon plasma produced in ultra-relativistic heavy ion collisions. A generalization of the standard nucleation theory to rapidly expanding system is proposed. The nucleation rate is derived via the new scaling parameter $\\lambda_Z$. It is shown that the size distribution of hadronic clusters plays an important role in the dynamics of the phase transition. The longitudinally expanding system is supercooled to about 3-6%, then it is reheated, and the hadronization is completed within 6-10 fm/c, i.e. 5-10 times faster than it was estimated earlier, in a strongly nonequilibrium way.

  12. Energy Emission by Quantum Systems in an Expanding FRW Metric

    CERN Document Server

    Sheehan, D P


    Bound quantum mechanical systems not expanding with the comoving frame of an expanding, flat FRW metric are found to release energy at a rate linearly proportional to the local Hubble constant ($H_{o}$) and the systems' binding energy ($E_{b}$); {\\em i.e.}, $\\dot{E} = H_{o} E_{b}$. Three exemplary quantum systems are examined. For systems with early cosmological condensation times | notably hadrons | time-integrated energy release could have been significant and could account for an appreciable fraction of the dark matter inventory.

  13. A Comparative Proteomic Analysis of the Buds and the Young Expanding Leaves of the Tea Plant (Camellia sinensis L.). (United States)

    Li, Qin; Li, Juan; Liu, Shuoqian; Huang, Jianan; Lin, Haiyan; Wang, Kunbo; Cheng, Xiaomei; Liu, Zhonghua


    Tea (Camellia sinensis L.) is a perennial woody plant that is widely cultivated to produce a popular non-alcoholic beverage; this beverage has received much attention due to its pleasant flavor and bioactive ingredients, particularly several important secondary metabolites. Due to the significant changes in the metabolite contents of the buds and the young expanding leaves of tea plants, high-performance liquid chromatography (HPLC) analysis and isobaric tags for relative and absolute quantitation (iTRAQ) analysis were performed. A total of 233 differentially expressed proteins were identified. Among these, 116 proteins were up-regulated and 117 proteins were down-regulated in the young expanding leaves compared with the buds. A large array of diverse functions was revealed, including roles in energy and carbohydrate metabolism, secondary metabolite metabolism, nucleic acid and protein metabolism, and photosynthesis- and defense-related processes. These results suggest that polyphenol biosynthesis- and photosynthesis-related proteins regulate the secondary metabolite content of tea plants. The energy and antioxidant metabolism-related proteins may promote tea leaf development. However, reverse transcription quantitative real-time PCR (RT-qPCR) showed that the protein expression levels were not well correlated with the gene expression levels. These findings improve our understanding of the molecular mechanism of the changes in the metabolite content of the buds and the young expanding leaves of tea plants.

  14. Cross-platform comparison of SYBR® Green real-time PCR with TaqMan PCR, microarrays and other gene expression measurement technologies evaluated in the MicroArray Quality Control (MAQC study

    Directory of Open Access Journals (Sweden)

    Dial Stacey L


    Full Text Available Abstract Background The MicroArray Quality Control (MAQC project evaluated the inter- and intra-platform reproducibility of seven microarray platforms and three quantitative gene expression assays in profiling the expression of two commercially available Reference RNA samples (Nat Biotechnol 24:1115-22, 2006. The tested microarrays were the platforms from Affymetrix, Agilent Technologies, Applied Biosystems, GE Healthcare, Illumina, Eppendorf and the National Cancer Institute, and quantitative gene expression assays included TaqMan® Gene Expression PCR Assay, Standardized (Sta RT-PCR™ and QuantiGene®. The data showed great consistency in gene expression measurements across different microarray platforms, different technologies and test sites. However, SYBR® Green real-time PCR, another common technique utilized by half of all real-time PCR users for gene expression measurement, was not addressed in the MAQC study. In the present study, we compared the performance of SYBR Green PCR with TaqMan PCR, microarrays and other quantitative technologies using the same two Reference RNA samples as the MAQC project. We assessed SYBR Green real-time PCR using commercially available RT2 Profiler™ PCR Arrays from SuperArray, containing primer pairs that have been experimentally validated to ensure gene-specificity and high amplification efficiency. Results The SYBR Green PCR Arrays exhibit good reproducibility among different users, PCR instruments and test sites. In addition, the SYBR Green PCR Arrays have the highest concordance with TaqMan PCR, and a high level of concordance with other quantitative methods and microarrays that were evaluated in this study in terms of fold-change correlation and overlap of lists of differentially expressed genes. Conclusion These data demonstrate that SYBR Green real-time PCR delivers highly comparable results in gene expression measurement with TaqMan PCR and other high-density microarrays.

  15. Low Cost Phased Array Antenna System Project (United States)

    National Aeronautics and Space Administration — JEM Engineering proved the technical feasibility of the FlexScan array?a very low-cost, highly-efficient, wideband phased array antenna?in Phase I, and stands ready...

  16. NRAO Very Long Baseline Array (VLBA) (United States)

    Federal Laboratory Consortium — The Very Long Baseline Array (VLBA) comprises ten radio telescopes spanning 5,351 miles. It's the world's largest, sharpest, dedicated telescope array. With an eye...

  17. Large Format Uncooled Focal Plane Array Project (United States)

    National Aeronautics and Space Administration — Uncooled focal plane arrays have improved dramatically and array sizes of 320x240 elements in a 50-?m pitch are commercially available at affordable cost. Black...

  18. Leakage analysis of crossbar memristor arrays

    KAUST Repository

    Zidan, Mohammed A.


    Crossbar memristor arrays provide a promising high density alternative for the current memory and storage technologies. These arrays suffer from parasitic current components that significantly increase the power consumption, and could ruin the readout operation. In this work we study the trade-off between the crossbar array density and the power consumption required for its readout. Our analysis is based on simulating full memristor arrays on a SPICE platform.

  19. Simulations of astronomical imaging phased arrays. (United States)

    Saklatvala, George; Withington, Stafford; Hobson, Michael P


    We describe a theoretical procedure for analyzing astronomical phased arrays with overlapping beams and apply the procedure to simulate a simple example. We demonstrate the effect of overlapping beams on the number of degrees of freedom of the array and on the ability of the array to recover a source. We show that the best images are obtained using overlapping beams, contrary to common practice, and show how the dynamic range of a phased array directly affects the image quality.

  20. Defect Characterization Using Two-Dimensional Arrays (United States)

    Velichko, A.; Wilcox, P. D.


    2D arrays are able to `view' a given defect from a range of angles leading to the possibility of obtaining richer characterization detail than possible with 1D arrays. In this paper a quantitative comparison of 2D arrays with different element layouts is performed. A technique for extracting the scattering matrix of a defect from the raw 2D array data is also presented. The method is tested on experimental data for characterization of various volumetric defects.

  1. Evaluating the effective numbers of independent tests and significant p-value thresholds in commercial genotyping arrays and public imputation reference datasets. (United States)

    Li, Miao-Xin; Yeung, Juilian M Y; Cherny, Stacey S; Sham, Pak C


    Current genome-wide association studies (GWAS) use commercial genotyping microarrays that can assay over a million single nucleotide polymorphisms (SNPs). The number of SNPs is further boosted by advanced statistical genotype-imputation algorithms and large SNP databases for reference human populations. The testing of a huge number of SNPs needs to be taken into account in the interpretation of statistical significance in such genome-wide studies, but this is complicated by the non-independence of SNPs because of linkage disequilibrium (LD). Several previous groups have proposed the use of the effective number of independent markers (M(e)) for the adjustment of multiple testing, but current methods of calculation for M(e) are limited in accuracy or computational speed. Here, we report a more robust and fast method to calculate M(e). Applying this efficient method [implemented in a free software tool named Genetic type 1 error calculator (GEC)], we systematically examined the M(e), and the corresponding p-value thresholds required to control the genome-wide type 1 error rate at 0.05, for 13 Illumina or Affymetrix genotyping arrays, as well as for HapMap Project and 1000 Genomes Project datasets which are widely used in genotype imputation as reference panels. Our results suggested the use of a p-value threshold of ~10(-7) as the criterion for genome-wide significance for early commercial genotyping arrays, but slightly more stringent p-value thresholds ~5 × 10(-8) for current or merged commercial genotyping arrays, ~10(-8) for all common SNPs in the 1000 Genomes Project dataset and ~5 × 10(-8) for the common SNPs only within genes.

  2. Aortic annulus eccentricity before and after transcatheter aortic valve implantation: Comparison of balloon-expandable and self-expanding prostheses

    Energy Technology Data Exchange (ETDEWEB)

    Schuhbaeck, Annika, E-mail: [Department of Cardiology, University of Erlangen, Erlangen (Germany); Weingartner, Christina [Department of Cardiology, University of Gießen, Giessen (Germany); Arnold, Martin; Schmid, Jasmin; Pflederer, Tobias; Marwan, Mohamed [Department of Cardiology, University of Erlangen, Erlangen (Germany); Rixe, Johannes; Nef, Holger [Department of Cardiology, University of Gießen, Giessen (Germany); Schneider, Christian [Department of Radiology, University of Gießen, Giessen (Germany); Lell, Michael; Uder, Michael [Department of Radiology, University of Erlangen, Erlangen (Germany); Ensminger, Stephan [Department of Thoracic and Cardiovascular Surgery, Heart and Diabetes Center NRW, Ruhr-University Bochum, Bad Oeynhausen (Germany); Feyrer, Richard; Weyand, Michael [Department of Cardiothoracic Surgery, University of Erlangen, Erlangen (Germany); Achenbach, Stephan [Department of Cardiology, University of Erlangen, Erlangen (Germany)


    Highlights: • Post-implant geometry of catheter-based aortic valve prostheses is influenced by aortic valve calcification. • Balloon-expandable prostheses are more circular as compared to self-expanding prostheses. • The impact of post-implant geometry on valve function needs to be investigated. - Abstract: Introduction: The geometry of the aortic annulus and implanted transcatheter aortic valve prosthesis might influence valve function. We investigated the influence of valve type and aortic valve calcification on post-implant geometry of catheter-based aortic valve prostheses. Methods: Eighty consecutive patients with severe aortic valve stenosis (mean age 82 ± 6 years) underwent computed tomography before and after TAVI. Aortic annulus diameters were determined. Influence of prosthesis type and degree of aortic valve calcification on post-implant eccentricity were analysed. Results: Aortic annulus eccentricity was reduced in patients after TAVI (0.21 ± 0.06 vs. 0.08 ± 0.06, p < 0.0001). Post-TAVI eccentricity was significantly lower in 65 patients following implantation of a balloon-expandable prosthesis as compared to 15 patients who received a self-expanding prosthesis (0.06 ± 0.05 vs. 0.15 ± 0.07, p < 0.0001), even though the extent of aortic valve calcification was not different. After TAVI, patients with a higher calcium amount retained a significantly higher eccentricity compared to patients with lower amounts of calcium. Conclusions: Patients undergoing TAVI with a balloon-expandable prosthesis show a more circular shape of the implanted prosthesis as compared to patients with a self-expanding prosthesis. Eccentricity of the deployed prosthesis is affected by the extent of aortic valve calcification.

  3. Maximum gain of Yagi-Uda arrays

    DEFF Research Database (Denmark)

    Bojsen, J.H.; Schjær-Jacobsen, Hans; Nilsson, E.


    Numerical optimisation techniques have been used to find the maximum gain of some specific parasitic arrays. The gain of an array of infinitely thin, equispaced dipoles loaded with arbitrary reactances has been optimised. The results show that standard travelling-wave design methods are not optimum....... Yagi–Uda arrays with equal and unequal spacing have also been optimised with experimental verification....

  4. Generating Milton Babbitt's all-partition arrays

    DEFF Research Database (Denmark)

    Bemman, Brian; Meredith, David


    backtracking algorithm for generating a particular type of all-partition array found in Babbitt’s works, known as a Smalley array. Constructing such an array is a difficult task, and we present two heuristics for helping to generate this type of structure. We provide the parameter values required...

  5. Kronecker Product of Two-dimensional Arrays

    Institute of Scientific and Technical Information of China (English)

    Lei Hu


    Kronecker sequences constructed from short sequences are good sequences for spread spectrum communication systems. In this paper we study a similar problem for two-dimensional arrays, and we determine the linear complexity of the Kronecker product of two arrays. Our result shows that similar good property on linear complexity holds for Kronecker product of arrays.

  6. Hubble Diagram Test of Expanding and Static Cosmological Models: The Case for a Slowly Expanding Flat Universe

    Directory of Open Access Journals (Sweden)

    Laszlo A. Marosi


    Full Text Available We present a new redshift (RS versus photon travel time ( test including 171 supernovae RS data points. We extended the Hubble diagram to a range of z = 0,0141–8.1 in the hope that at high RSs, the fitting of the calculated RS/ diagrams to the observed RS data would, as predicted by different cosmological models, set constraints on alternative cosmological models. The Lambda cold dark matter (ΛCDM, the static universe model, and the case for a slowly expanding flat universe (SEU are considered. We show that on the basis of the Hubble diagram test, the static and the slowly expanding models are favored.

  7. An Expanded Model of Faculty Vitality in Academic Medicine (United States)

    Dankoski, Mary E.; Palmer, Megan M.; Laird, Thomas F. Nelson; Ribera, Amy K.; Bogdewic, Stephen P.


    Many faculty in today's academic medical centers face high levels of stress and low career satisfaction. Understanding faculty vitality is critically important for the health of our academic medical centers, yet the concept is ill-defined and lacking a comprehensive model. Expanding on previous research that examines vital faculty in higher…

  8. Dynamical 3-Space: Black Holes in an Expanding Universe

    Directory of Open Access Journals (Sweden)

    Rothall D. P.


    Full Text Available Black holes are usually studied without including effects of the expanding universe. However in some recent studies black holes have been embedded in an expanding universe, in order to determine the interplay, if any, of these two dynamical processes. Dynamical 3-space theory contains time independent solutions for black holes, which are spatial in-flows, and separately the time dependent Hubble expansion. This theory has explained numerous puzzles in observational astrophysics and contains 3 constants; G, - which from experimental data turns out to be the fine structure constant, and - which is a small but nonzero distance, possibly a Planck-type length. The Hubble expansion in the dynamical 3-space theory cannot be “switched o”, forcing the study, first, of isolated black holes coexisting with the expanding universe. It is shown that a time dependent black hole and expanding universe solution exists. The nature and implications of these solutions are discussed as they evolve over time. A dynamical network of black holes and induced linking cosmic filaments forming bubble structures is discussed, as a consequence of dynamical 3-space undergoing a dynamical breakdown of homogeneity and isotropy, even in the absence of baryonic matter.

  9. Targeting China's Newly Rich Western Luxury Brands to Expand

    Institute of Scientific and Technical Information of China (English)


    @@ Western fashion brands have been considering China as a market for cheap raw materials and labor for several centuries.However,in recent months,China's booming economy has attracted the fashion industry.Many high-profit fashion brands said they intend to expand business in China.

  10. Time Impact of Expanded Process Control Procedures (EPCP) (United States)


    than the Organizational maintenance. Depot maintenance occurs in the manufacturer’s specialized shops . This type of work is generally the most...EXPANDED PROCESS CONTROL PROCEDURES (EPCP) by Jeremy C. Joseph June 2014 Thesis Advisor: Gary O. Langford Second Reader: Diana I. Angelis...

  11. New expanded bed adsorbents for the recovery of DNA

    DEFF Research Database (Denmark)

    Theodossiou, Irini; Olander, M. A.; Sondergaard, M.;


    A 20-40 mum pellicular high density (similar to3.7 g cm(-3)) expanded bed material has been designed for the capture of DNA and other large macromolecules. Anion exchangers fashioned out of these supports exhibited dramatically enhanced DNA binding capacities over commercial anion exchange...

  12. Expanding the Vision of Self: Why the Arts Matter (United States)

    Nathan, Linda F.


    In this reflective essay, Linda F. Nathan, the founding headmaster of the Boston Arts Academy and currently the executive director of Center for Arts in Education at Boston Arts Academy, shares a story about how one student, Ronald, expands his vision of self through his engagement with the arts. In presenting this reflection on Ronald's…

  13. Expanding the taxonomy of the diagnostic criteria for temporomandibular disorders. (United States)

    Peck, C C; Goulet, J-P; Lobbezoo, F; Schiffman, E L; Alstergren, P; Anderson, G C; de Leeuw, R; Jensen, R; Michelotti, A; Ohrbach, R; Petersson, A; List, T


    There is a need to expand the current temporomandibular disorders' (TMDs) classification to include less common but clinically important disorders. The immediate aim was to develop a consensus-based classification system and associated diagnostic criteria that have clinical and research utility for less common TMDs. The long-term aim was to establish a foundation, vis-à-vis this classification system, that will stimulate data collection, validity testing and further criteria refinement. A working group [members of the International RDC/TMD Consortium Network of the International Association for Dental Research (IADR), members of the Orofacial Pain Special Interest Group (SIG) of the International Association for the Study of Pain (IASP), and members from other professional societies] reviewed disorders for inclusion based on clinical significance, the availability of plausible diagnostic criteria and the ability to operationalise and study the criteria. The disorders were derived from the literature when possible and based on expert opinion as necessary. The expanded TMDs taxonomy was presented for feedback at international meetings. Of 56 disorders considered, 37 were included in the expanded taxonomy and were placed into the following four categories: temporomandibular joint disorders, masticatory muscle disorders, headache disorders and disorders affecting associated structures. Those excluded were extremely uncommon, lacking operationalised diagnostic criteria, not clearly related to TMDs, or not sufficiently distinct from disorders already included within the taxonomy. The expanded TMDs taxonomy offers an integrated approach to clinical diagnosis and provides a framework for further research to operationalise and test the proposed taxonomy and diagnostic criteria.

  14. Reflections on Using Blogs to Expand In-Class Discussion (United States)

    Wang, Shiang-Kwei; Hsua, Hui-Yin


    Originally, blogs served as personal journaling tools. Recently, blogs have facilitated the formation of online communities and have thus expanded to more extensive uses in education. Little has been learned about using blogs as a collaboration tool in educational contexts. In this article, the authors share their experiences with using blogs to…

  15. Diaspora, Migration, and Globalization: Expanding the Discourse of Adult Education (United States)

    Alfred, Mary V.


    This article explores how notions of diaspora, migration, and globalization intersect to inform identities and social realities of those who leave their homeland and resettle in other nations. It calls for expanding the discourse of adult education to incorporate critical studies of the diaspora to make visible the inequality and imbalance of…

  16. Lattice expansion of carbon-stabilized expanded austenite

    DEFF Research Database (Denmark)

    Hummelshøj, Thomas Strabo; Christiansen, Thomas; Somers, Marcel A. J.


    The lattice parameter of expanded austenite was determined as a function of the content of interstitially dissolved carbon in homogeneous, carburized thin stainless steel foils. For the first time this expansion of the face-centered cubic lattice is determined on unstrained austenite. It is found...

  17. Expanding Distribution of Lethal Amphibian Fungus Batrachochytrium salamandrivorans in Europe. (United States)

    Spitzen-van der Sluijs, Annemarieke; Martel, An; Asselberghs, Johan; Bales, Emma K; Beukema, Wouter; Bletz, Molly C; Dalbeck, Lutz; Goverse, Edo; Kerres, Alexander; Kinet, Thierry; Kirst, Kai; Laudelout, Arnaud; Marin da Fonte, Luis F; Nöllert, Andreas; Ohlhoff, Dagmar; Sabino-Pinto, Joana; Schmidt, Benedikt R; Speybroeck, Jeroen; Spikmans, Frank; Steinfartz, Sebastian; Veith, Michael; Vences, Miguel; Wagner, Norman; Pasmans, Frank; Lötters, Stefan


    Emerging fungal diseases can drive amphibian species to local extinction. During 2010-2016, we examined 1,921 urodeles in 3 European countries. Presence of the chytrid fungus Batrachochytrium salamandrivorans at new locations and in urodeles of different species expands the known geographic and host range of the fungus and underpins its imminent threat to biodiversity.

  18. Expanding the mirror : vicarious activity for actions, emotions, and sensations

    NARCIS (Netherlands)

    Keysers, Christian; Gazzola, Valeria


    We often empathically share the states of others. The discovery of 'mirror neurons' suggested a neural mechanism for monkeys to share the actions of others. Here we expand this view by showing that mirror neurons for actions not only exist in the premotor cortex or in monkeys and that vicarious acti

  19. Expanding Hipolito-Delgado and Lee's Empowerment Theory: A Response (United States)

    Zalaquett, Carlos; D'Andrea, Michael


    Hipolito-Delgado and Lee's article entitled "Empowerment Theory for the Professional School Counselor: A Manifesto for What Really Matters" represents an important contribution to the school counseling literature for two reasons: (1) It helps to expand a growing knowledge base related to the work school counselors can do to foster the…

  20. How to expand the corpus of spoken English

    Institute of Scientific and Technical Information of China (English)



    With the speeding up of economic globalization, English as a global language status is becoming more and more manifest.This article from the spoken corpus concept is introduced, combined with the students’ oral English learning methods, guide the students in learning spoken English in different ways to find the effective way to expand the spoken language corpora.

  1. Studies of an expanded trinucleotide repeat in transgenic mice

    Energy Technology Data Exchange (ETDEWEB)

    Bingham, P.; Wang, S.; Merry, D. [Univ. of Pennsylvania, Philadelphia, PA (United States)


    Spinal and bulbar muscular atrophy (SBMA) is a progressive motor neuron disease caused by expansion of a trinucleotide repeat in the androgen receptor gene (AR{sup exp}). AR{sup exp} repeats expand further or contract in approximately 25% of transmissions. Analogous {open_quotes}dynamic mutations{close_quotes} have been reported in other expanded trinucleotide repeat disorders. We have been developing a mouse model of this disease using a transgenic approach. Expression of the SBMA AR was documented in transgenic mice with an inducible promoter. No phenotypic effects of transgene expression were observed. We have extended our previous results on stability of the expanded trinucleotide repeat in transgenic mice in two lines carrying AR{sup exp}. Tail DNA was amplified by PCR using primers spanning the repeat on 60 AR{sup exp} transgenic mice from four different transgenic lines. Migration of the PCR product through an acrylamide gel showed no change of the 45 CAG repeat length in any progeny. Similarly, PCR products from 23 normal repeat transgenics showed no change from the repeat length of the original construct. Unlike the disease allele in humans, the expanded repeat AR cDNA in transgenic mice showed no change in repeat length with transmission. The relative stability of CAG repeats seen in the transgenic mice may indicate either differences in the fidelity of replicative enzymes, or differences in error identification and repair between mice and humans. Integration site or structural properties of the transgene itself might also play a role.


    Institute of Scientific and Technical Information of China (English)

    Liu Bin; Dong Huanhe; Li Zhu


    In this paper,an extended loop algebra is constructed from which an isospectral problem established.It follows that the integrable couplings of the Tu hierarchy and M-AKNS-KN hierarchy are obtained.and their Hamilton structures are presented by the quadratic-form identity.Moreover,we guarantee that the expanding model we obtained are also Liouville integrable.

  3. How to expand the corpus of spoken English

    Institute of Scientific and Technical Information of China (English)



    With the speeding up of economic globalization, English as a global language status is becoming more and more manifest.This article from the spoken corpus concept is introduced, combined with the students' oral English learning methods, guide the students in learning spoken English in different ways to find the effective way to expand the spoken language corpora.

  4. Crowd Around: Expanding Your Donor Pool with Crowdfunding (United States)

    Jarrell, Andrea


    At most institutions, annual fund-giving is down. Crowdfunding sites allow people with a great idea or worthy cause to bypass traditional funding methods and take their case directly to web-savvy investors and donors. This article describes how higher education institutions are expanding their donor pool through such crowdfunding sites as USEED,…

  5. Expanding the Spanish Classroom: The "Art" in Liberal Arts (United States)

    Díaz, Erin M.


    Supplementing the foreign language curriculum with the incorporation of art museum visits has benefits for students, faculty, the campus art gallery, and the institution. Such a collaborative program serves to expand the classroom and complement instruction by providing learners with a new space to engage in authentic practice in the target…

  6. Role of self expandable stents in management of colorectalcancers

    Institute of Scientific and Technical Information of China (English)


    Acute malignant colorectal obstruction is a complicationof colorectal cancer that can occur in 7%-29% of patients. Self-expanding metallic stent placement formalignant colorectal obstruction has gained popularity asa safe and effective procedure for relieving obstruction.This technique can be used in the palliation of malignantcolorectal obstruction, as a bridge to elective surgery forresectable colorectal cancers, palliation of extracolonicmalignant obstruction, and for nonmalignant etiologiessuch as anastomotic strictures, Crohn's disease, radiationtherapy, and diverticular diseases. Self-expandingmetallic stent has its own advantages and disadvantagesover the surgery in these indications. During the insertionof the self-expanding metallic stent, and in the followup,short term and long term morbidities should be keptin mind. The most important complications of the stentsare perforation, stent obstruction, stent migration, andbleeding. Additionally, given the high risk of perforation,if a patient is treated or being consideredfortreatmentwithantiangiogenic agents such as bevacizumab, it isnot recommended to use self-expanding metallic stentas a palliative treatment for obstruction. Therefore, thereis a need for careful clinical evaluation for each patientwho is a candidate for this procedure. The purpose ofthis review was to evaluate self-expanding metallic stentin the management of the obstruction of the colon dueto the colorectal and extracolonic obstruction.

  7. Expanding the taxonomy of the diagnostic criteria for temporomandibular disorders

    NARCIS (Netherlands)

    Peck, C.C.; Goulet, J-P; Lobbezoo, F.; Schiffman, E.L.; Alstergren, P.; Anderson, G.C.; De Leeuw, R.; Jensen, R.; Michelotti, A.; Ohrbach, R.; Petersson, A.; List, T.


    There is a need to expand the current temporomandibular disorders' (TMDs) classification to include less common but clinically important disorders. The immediate aim was to develop a consensus-based classification system and associated diagnostic criteria that have clinical and research utility for

  8. Validation of the Chinese Expanded Euthanasia Attitude Scale (United States)

    Chong, Alice Ming-Lin; Fok, Shiu-Yeu


    This article reports the validation of the Chinese version of an expanded 31-item Euthanasia Attitude Scale. A 4-stage validation process included a pilot survey of 119 college students and a randomized household survey with 618 adults in Hong Kong. Confirmatory factor analysis confirmed a 4-factor structure of the scale, which can therefore be…

  9. 2010 Impacts: The Expanded Food and Nutrition Education Program (EFNEP) (United States)

    National Institute of Food and Agriculture, 2011


    Since 1969, the Expanded Food and Nutrition Education Program (EFNEP) has improved the diets and food-related behaviors of program participants. Each year EFNEP enrolls more than half a million new program participants. In 2010, EFNEP reached 137,814 adults and 463,530 youth directly and nearly 400,000 family members indirectly. This paper…

  10. The Expanded Food and Nutrition Education Program (EFNEP) (United States)

    National Institute of Food and Agriculture, 2010


    Obesity, poor health, and limited physical activity are major health concerns. The Expanded Food and Nutrition Education Program (EFNEP) improves the health and well-being of limited resource families and youth. Additionally, EFNEP leads to public savings. Research shows that better health is associated with reduced health care costs, less…

  11. Expanding the Role of Connectionism in SLA Theory (United States)

    Language Learning, 2013


    In this article, I explore how connectionism might expand its role in second language acquisition (SLA) theory by showing how some symbolic models of bilingual and second language lexical memory can be reduced to a biologically realistic (i.e., neurally plausible) connectionist model. This integration or hybridization of the two models follows the…

  12. Expanding Gerontology Enrollments: Successful Results of an Innovative Outreach Program (United States)

    Reynolds, Sandra L.; Haley, William E.; Hyer, Kathryn


    As state budget allocations for higher education decrease, "specialty" programs such as gerontology must continually demonstrate their productivity. State and private universities increasingly rely on student credit hours (SCH) or tuition generated, which is making it difficult for many gerontology programs to expand. The School of Aging Studies…

  13. Expanding the Oral Hygiene Curriculum in a Nursing Program. (United States)

    Briggs, Susan; Griego, Elizabeth

    A program was implemented to expand the curriculum materials within the Licensed Practical Nursing (LPN) Program at Clark County Community College (CCCC) which relate to oral hygiene care for the hospital patient. The instructional materials included a video tape and a written instructional packet which were researched, prepared, and presented by…

  14. Expanding Possibilities through Metaphor: Breaking Biases to Improve Crisis Management (United States)

    Cirka, Carol C.; Corrigall, Elizabeth A.


    In this article, we demonstrate that an exercise using metaphors to overcome cognitive biases helped students to proactively imagine and prepare for an expanded set of potential crises. The exercise complements traditional textbook approaches to crisis management and incorporates creativity skill building in a realistic context. Learning outcomes…

  15. Expanding the taxonomy of the diagnostic criteria for temporomandibular disorders

    DEFF Research Database (Denmark)

    Peck, C C; Goulet, J-P; Lobbezoo, F


    criteria and the ability to operationalise and study the criteria. The disorders were derived from the literature when possible and based on expert opinion as necessary. The expanded TMDs taxonomy was presented for feedback at international meetings. Of 56 disorders considered, 37 were included...

  16. CSUC Standard for the CLSI Expanded Title Record. (United States)

    Case, Barbara; And Others

    The system specifications described have been adopted by the 19 California State University and Colleges Libraries for use with the CL Systems "Expanded Title Record" format. It is anticipated that these specifications will be tested at California State University, Chico, beginning midyear 1981. Should this pilot demonstration prove…

  17. CSU Standard for the CLSI Expanded Title Record. (United States)

    Anderson, Karen; And Others

    The revised system specifications described in this document were adopted by the 19 California State University and College (CSUC) libraries for a second test version of the CLSI "Expanded Title Record" public access online catalog at California State University at Chico. Should this pilot demonstration of the data format prove…


    This report represents the second demonstration of cleaner technologies to support the goals of the 33/50 Program under the EPA Cooperative Agreement No. CR-821848. The report presents assessment results of alternative packaging materials which could potentially replace expanded...

  19. Educated Japanese English: Expanding Oral/Aural Core Vocabulary (United States)

    D'Angelo, James F.


    Having established the world's first undergraduate college of world Englishes, and in an "Expanding-Circle" setting, we have created the pilot environment for a new type of ELT curriculum. We must address the creation of a curriculum that is pervasively informed by the philosophy of world Englishes at both a macro and micro level. Certain…

  20. Recent Results from Telescope Array

    CERN Document Server

    Fukushima, M


    The Telescope Array (TA) is an experiment to observe Ultra-High Energy Cosmic Rays (UHECRs). TA's recent results, the energy spectrum and anisotropy based on the 6-year surface array data, and the primary composition obtained from the shower maximum Xmax are reported. The spectrum demonstrates a clear dip and cutoff. The shape of the spectrum is well described by the energy loss of extra-galactic protons interacting with the cosmic microwave background (CMB). Above the cutoff, a medium-scale (20 degrees radius) flux enhancement was observed near the Ursa-Major. A chance probability of creating this hotspot from the isotropic flux is 4.0 sigma. The measured Xmax is consistent with the primary being proton or light nuclei for energies 10^18.2 eV - 10^19.2 eV.

  1. Highlights from the Telescope Array

    Directory of Open Access Journals (Sweden)

    Matthews J.N.


    Full Text Available The Telescope Array measures the properties of ultra high energy cosmic ray induced extensive air showers. We do this using a variety of techniques including an array of scintillator detectors to sample the footprint of the air shower when it reaches the Earth’s surface and telescopes to measure the fluorescence and Cerenkov light of the air shower. From this we determine the energy spectrum and chemical composition of the primary particles. We also search for sources of cosmic rays and anisotropy. We have found evidence of a possible source of ultra high energy cosmic rays in the northern sky. The experiment and its most recent measurements will be discussed.

  2. Antenna Arrays and Automotive Applications

    CERN Document Server

    Rabinovich, Victor


    This book throws a lifeline to designers wading through mounds of antenna array patents looking for the most suitable systems for their projects. Drastically reducing the research time required to locate solutions to the latest challenges in automotive communications, it sorts and systematizes material on cutting-edge antenna arrays that feature multi-element communication systems with enormous potential for the automotive industry. These new systems promise to make driving safer and more efficient, opening up myriad applications, including vehicle-to-vehicle traffic that prevents collisions, automatic toll collection, vehicle location and fine-tuning for cruise control systems. This book’s exhaustive coverage begins with currently deployed systems, frequency ranges and key parameters. It proceeds to examine system geometry, analog and digital beam steering technology (including "smart" beams formed in noisy environments), maximizing signal-to-noise ratios, miniaturization, and base station technology that ...

  3. Subwavelength micropillar array terahertz lasers. (United States)

    Krall, Michael; Brandstetter, Martin; Deutsch, Christoph; Detz, Hermann; Andrews, Aaron Maxwell; Schrenk, Werner; Strasser, Gottfried; Unterrainer, Karl


    We report on micropillar-based terahertz lasers with active pillars that are much smaller than the emission wavelength. These micropillar array lasers correspond to scaled-down band-edge photonic crystal lasers forming an active photonic metamaterial. In contrast to photonic crystal lasers which use significantly larger pillar structures, lasing emission is not observed close to high-symmetry points in the photonic band diagram, but in the effective medium regime. We measure stimulated emission at 4 THz for micropillar array lasers with pillar diameters of 5 µm. Our results not only demonstrate the integration of active subwavelength optics in a terahertz laser, but are also an important step towards the realization of nanowire-based terahertz lasers.

  4. Invasive tightly coupled processor arrays

    CERN Document Server



    This book introduces new massively parallel computer (MPSoC) architectures called invasive tightly coupled processor arrays. It proposes strategies, architecture designs, and programming interfaces for invasive TCPAs that allow invading and subsequently executing loop programs with strict requirements or guarantees of non-functional execution qualities such as performance, power consumption, and reliability. For the first time, such a configurable processor array architecture consisting of locally interconnected VLIW processing elements can be claimed by programs, either in full or in part, using the principle of invasive computing. Invasive TCPAs provide unprecedented energy efficiency for the parallel execution of nested loop programs by avoiding any global memory access such as GPUs and may even support loops with complex dependencies such as loop-carried dependencies that are not amenable to parallel execution on GPUs. For this purpose, the book proposes different invasion strategies for claiming a desire...

  5. Sandia concentrator array testing experiences (United States)

    Gerwin, H. J.; Rogers, C. B.; Beavis, L. C.

    An assortment of PV concentrator modules and arrays have been tested and evaluated at the Sandia outdoor test facility. These test items include actively-cooled parabolic reflector and linear Fresnel lens concentrators, and actively- and passively-cooled point focus collectors. Maximum power efficiencies were measured over a range of sunlight intensities and cell temperatures, then a linear equation relating efficiency to cell temperature and insolation was developed for each module and array by using a multiple linear regression analysis technique on the data. An evaluation of the suitability of Polyvinyl-Butyral (PVB) as a material used to laminate solar cells to glass is presented. Some general observations are made on the accuracy of tracking systems, and the maintenance of these systems.

  6. Quantitative detection of protein arrays. (United States)

    Levit-Binnun, Nava; Lindner, Ariel B; Zik, Ory; Eshhar, Zelig; Moses, Elisha


    We introduce a quantitative method that utilizes scanning electron microscopy for the analysis of protein chips (SEMPC). SEMPC is based upon counting target-coated gold particles interacting specifically with ligands or proteins arrayed on a derivative microscope glass slide by utilizing backscattering electron detection. As model systems, we quantified the interactions of biotin and streptavidin and of an antibody with its cognate hapten. Our method gives quantitative molecule-counting capabilities with an excellent signal-to-noise ratio and demonstrates a broad dynamic range while retaining easy sample preparation and realistic automation capability. Increased sensitivity and dynamic range are achieved in comparison to currently used array detection methods such as fluorescence, with no signal bleaching, affording high reproducibility and compatibility with miniaturization. Thus, our approach facilitates the determination of the absolute number of molecules bound to the chip rather than their relative amounts, as well as the use of smaller samples.

  7. Designing a Hemispherical Breast RF Coil Array for MRI

    Institute of Scientific and Technical Information of China (English)

    XU Wen-long; ZHANG Ju-cheng; WANG Zhi-kang; LI Xing-xin; LOU Hai-fang


    In this paper, an approach to the design of hemispherical breast RF coil array is proposedThe target field method is applied to find the current density distribution on the hemisphere surface, which induces a homogeneous magnetic field in a hemispherical volumeThe components of current density are expanded into Fourier series, and the highly ill-conditioned character of the linear equation related to Fourier coefficients is solved using the Tikhonov regularization method with a minimum curvature penalty functionThe winding pattern was acquired using the stream function techniqueThe results indicate that a simple winding pattern with homogeneous magnetic field can be obtained through manually selecting the penalty factor.

  8. Including the pulsar-term in continuous gravitational-wave searches using pulsar timing arrays: a blessing and a curse

    CERN Document Server

    Taylor, Stephen; Gair, Jonathan


    We describe several new techniques which accelerate Bayesian searches for continuous gravitational-wave emission from supermassive black-hole binaries using pulsar timing arrays. These techniques mitigate the problematic increase of search-dimensionality with the size of the pulsar array which arises from having to include an extra parameter per pulsar as the array is expanded. This extra parameter corresponds to searching over the phase of the gravitational-wave as it propagates past each pulsar so that we can coherently include the pulsar-term in our search strategies. Our techniques make the analysis tractable with powerful evidence-evaluation packages like MultiNest. We find good agreement of our techniques with the parameter-estimation and Bayes factor evaluation performed with full signal templates, and conclude that these techniques make excellent first-cut tools for detection and characterisation of continuous gravitational-wave signals with pulsar timing arrays. Crucially, at low to moderate signal-t...

  9. Expanded retroauricular skin and fascial flap in congenital microtia reconstruction. (United States)

    Zhang, Qingguo; Quan, Yuzhu; Su, Yuanda; Shi, Lei; Xie, Yangchun; Liu, Xinhai


    The aim of this article is to report the application of expanding retroauricular skin fascia flap, and autogenous costal cartilage for congenital microtia reconstruction. Microtia reconstruction was generally completed in 3 surgical stages. In the first surgical stage, a 50 or 80 mL kidney-shaped tissue expander was inserted subcutaneously in the retroauricular mastoid region. Inflation of saline volume increased up to 60 to 80 mL, and skin flap was expanded for 2 to 3 months postoperatively. In the second surgical stage, removal of tissue expander, formation of retroauricular skin flap, elevation of retroauricular fascia flap, and pedicles of both flaps in remnant ear side were performed. Costal cartilage was harvested from ipsilateral side chest to the ear for reconstruction. The 3D ear framework was sculpted with stabilization of structure, contour and erection. Simultaneously, intermediate full thickness skin graft of 4 x 8 cm was obtained from previous incision site from where costal cartilage was harvested. Cartilage ear framework was anchored between skin flap and fascia flap, and fixed it symmetrically to the opposite normal ear, inferior portion of the ear framework was wrapped by remnant ear lobule, expanded skin flap covered the anterior portion of the framework, fascial flap was draped to the posterior side of framework and helical rim, then fascial flap was surfaced by intermediate full thickness skin graft. Suction drain was inserted and coated between skin flap and framework, drain was removed fifth postoperative day. Tragus construction and conchal excavation with skin graft was performed in the third stage of microtia reconstruction. Between October 2000 and October 2007, 426 cases were diagnosed as unilateral microtia patients and 22 cases were bilateral microtia patients. Therefore, 448 microtia ears were treated with tissue expander and autogenous costal cartilage. In 262 cases, structure of the helix, tragus, conchal excavation

  10. The Parkes Pulsar Timing Array

    CERN Document Server

    Hobbs, G


    The aims of the Parkes Pulsar Timing Array (PPTA) project are to 1) make a direct detection of gravitational waves, 2) improve the solar system planetary ephemeris and 3) develop a pulsar-based time scale. In this article we describe the project, explain how the data are collected and processed and describe current research. Our current data sets are able to place an upper bound on the gravitational wave background that is the most stringent to date.

  11. A distributed array antenna system (United States)

    Shaw, R.; Kovitz, J.


    The Space Station communication system will use microwave frequency radio links to carry digitized information from sender to receiver. The ability of the antenna system to meet stringent requirements on coverage zones, multiple users, and reliability will play an important part in the overall multiple access communication system. This paper will describe the configuration of a multibeam conformal phased array antenna and the individual microwave integrated components incoporated into this antenna system.

  12. Nonlinear ultrasonic phased array imaging. (United States)

    Potter, J N; Croxford, A J; Wilcox, P D


    This Letter reports a technique for the imaging of acoustic nonlinearity. By contrasting the energy of the diffuse field produced through the focusing of an ultrasonic array by delayed parallel element transmission with that produced by postprocessing of sequential transmission data, acoustic nonlinearity local to the focal point is measured. Spatially isolated wave distortion is inferred without requiring interrogation of the wave at the inspection point, thereby allowing nonlinear imaging through depth.

  13. Nonlinear Ultrasonic Phased Array Imaging (United States)

    Potter, J. N.; Croxford, A. J.; Wilcox, P. D.


    This Letter reports a technique for the imaging of acoustic nonlinearity. By contrasting the energy of the diffuse field produced through the focusing of an ultrasonic array by delayed parallel element transmission with that produced by postprocessing of sequential transmission data, acoustic nonlinearity local to the focal point is measured. Spatially isolated wave distortion is inferred without requiring interrogation of the wave at the inspection point, thereby allowing nonlinear imaging through depth.

  14. Nonlinear ultrasonic phased array imaging


    Potter, J N; Croxford, A.J.; Wilcox, P. D.


    This Letter reports a technique for the imaging of acoustic nonlinearity. By contrasting the energy of the diffuse field produced through the focusing of an ultrasonic array by delayed parallel element transmission with that produced by postprocessing of sequential transmission data, acoustic nonlinearity local to the focal point is measured. Spatially isolated wave distortion is inferred without requiring interrogation of the wave at the inspection point, thereby allowing nonlinear imaging t...

  15. Array Imaging of Noisy Materials (United States)

    Wilcox, P. D.


    The ultimate limit on ultrasonic defect detectability is the coherent noise due to material backscatter. A model of such noise in ultrasonic array images is developed based on the single scattering assumption. The implications of the model are discussed and supported with some experimental examples. In the case of a copper specimen, it is shown that an improvement in signal to coherent noise ratio of over 30 dB can be obtained by optimization of imaging parameters.

  16. Automated array assembly. Annual report

    Energy Technology Data Exchange (ETDEWEB)

    Williams, B.F.


    The goal of the ERDA/JPL LSSA program of $0.50/W selling price for array modules in 1986 turns out to have been remarkably appropriate. An extensive and detailed analysis of technologies which could be related to array module manufacturing was completed and a minimum manufacturing cost in a highly automated line of $0.30/W was found assuming the silicon is free. The panels are of a double glass construction and are based on round wafers. Screen printed silver has been used as the metallization with a spray-coated AR layer. The least expensive junction formation technology appears to be ion implantation; however, several other technologies also may be used with very little cost penalty as described. Based on the required investment, a profit of $0.05/W appears reasonable. If silicon wafers are available at a price of $20 to 40/M/sup 2/, a selling price for these array modules of $0.50 to 0.66/W is projected. An analysis of the impact of factory size has been made. For a production level of 500 MW/yr, the price above is derived. For comparison, a factory processing 50 MW/yr using the same technology would sell modules for $0.54/W to $0.70/W. An analysis of the impact of wafer size indicates that with traditional metallization and panel designs there is no advantage in increasing wafer size from 3 in. to 5 in., and, in fact, there is some penalty (10% in $/W) due to increasedmetallization costs and reduced system performance. There is a premium placed on high efficiency due to its impact, not only on array module cost, but on system cost. For the near term goals of this program, wafers cut from single-crystal material seem the most likely sheet configuration.

  17. Array-based photoacoustic spectroscopy (United States)

    Autrey, S. Thomas; Posakony, Gerald J.; Chen, Yu


    Methods and apparatus for simultaneous or sequential, rapid analysis of multiple samples by photoacoustic spectroscopy are disclosed. A photoacoustic spectroscopy sample array including a body having at least three recesses or affinity masses connected thereto is used in conjunction with a photoacoustic spectroscopy system. At least one acoustic detector is positioned near the recesses or affinity masses for detection of acoustic waves emitted from species of interest within the recesses or affinity masses.

  18. A Systolic Array RLS Processor


    Asai, T.; Matsumoto, T.


    This paper presents the outline of the systolic array recursive least-squares (RLS) processor prototyped primarily with the aim of broadband mobile communication applications. To execute the RLS algorithm effectively, this processor uses an orthogonal triangularization technique known in matrix algebra as QR decomposition for parallel pipelined processing. The processor board comprises 19 application-specific integrated circuit chips, each with approximately one million gates. Thirty-two bit ...

  19. Micromirror Arrays for Adaptive Optics

    Energy Technology Data Exchange (ETDEWEB)

    Carr, E.J.


    The long-range goal of this project is to develop the optical and mechanical design of a micromirror array for adaptive optics that will meet the following criteria: flat mirror surface ({lambda}/20), high fill factor (> 95%), large stroke (5-10 {micro}m), and pixel size {approx}-200 {micro}m. This will be accomplished by optimizing the mirror surface and actuators independently and then combining them using bonding technologies that are currently being developed.

  20. Beyond Climate and Weather Science: Expanding the Forecasting Family to Serve Societal Needs (United States)

    Barron, E. J.


    The ability to "anticipate" the future is what makes information from the Earth sciences valuable to society - whether it is the prediction of severe weather or the future availability of water resources in response to climate change. An improved ability to anticipate or forecast has the potential to serve society by simultaneously improving our ability to (1) promote economic vitality, (2) enable environmental stewardship, (3) protect life and property, as well as (4) improve our fundamental knowledge of the earth system. The potential is enormous, yet many appear ready to move quickly toward specific mitigation and adaptation strategies assuming that the science is settled. Five important weakness must be addressed first: (1) the formation of a true "climate services" function and capability, (2) the deliberate investment in expanding the family of forecasting elements to incorporate a broader array of environmental factors and impacts, (3) the investment in the sciences that connect climate to society, (4) a deliberate focus on the problems associated with scale, in particular the difference between the scale of predictive models and the scale associated with societal decisions, and (5) the evolution from climate services and model predictions to the equivalent of "environmental intelligence centers." The objective is to bring the discipline of forecasting to a broader array of environmental challenges. Assessments of the potential impacts of global climate change on societal sectors such as water, human health, and agriculture provide good examples of this challenge. We have the potential to move from a largely reactive mode in addressing adverse health outcomes, for example, to one in which the ties between climate, land cover, infectious disease vectors, and human health are used to forecast and predict adverse human health conditions. The potential exists for a revolution in forecasting, that entrains a much broader set of societal needs and solutions. The

  1. Measured Aperture-Array Noise Temperature of the Mark II Phased Array Feed for ASKAP

    CERN Document Server

    Chippendale, A P; Beresford, R J; Hampson, G A; Shaw, R D; Hayman, D B; Macleod, A; Forsyth, A R; Hay, S G; Leach, M; Cantrall, C; Brothers, M L; Hotan, A W


    We have measured the aperture-array noise temperature of the first Mk. II phased array feed that CSIRO has built for the Australian Square Kilometre Array Pathfinder telescope. As an aperture array, the Mk. II phased array feed achieves a beam equivalent noise temperature less than 40 K from 0.78 GHz to 1.7 GHz and less than 50 K from 0.7 GHz to 1.8 GHz for a boresight beam directed at the zenith. We believe these are the lowest reported noise temperatures over these frequency ranges for ambient-temperature phased arrays. The measured noise temperature includes receiver electronics noise, ohmic losses in the array, and stray radiation from sidelobes illuminating the sky and ground away from the desired field of view. This phased array feed was designed for the Australian Square Kilometre Array Pathfinder to demonstrate fast astronomical surveys with a wide field of view for the Square Kilometre Array.

  2. A novel method to design sparse linear arrays for ultrasonic phased array. (United States)

    Yang, Ping; Chen, Bin; Shi, Ke-Ren


    In ultrasonic phased array testing, a sparse array can increase the resolution by enlarging the aperture without adding system complexity. Designing a sparse array involves choosing the best or a better configuration from a large number of candidate arrays. We firstly designed sparse arrays by using a genetic algorithm, but found that the arrays have poor performance and poor consistency. So, a method based on the Minimum Redundancy Linear Array was then adopted. Some elements are determined by the minimum-redundancy array firstly in order to ensure spatial resolution and then a genetic algorithm is used to optimize the remaining elements. Sparse arrays designed by this method have much better performance and consistency compared to the arrays designed only by a genetic algorithm. Both simulation and experiment confirm the effectiveness.

  3. Multicultural Counseling beyond the Relationship: Expanding the Repertoire with Techniques (United States)

    Hanna, Fred J.; Cardona, Betty


    Multicultural counseling approaches variously focus on the counseling relationship. Relatively few discuss clinical techniques and strategies to any significant extent. This article explores enhancing multicultural counseling by offering an array of techniques and strategies based on addressing oppression and increasing psychological freedom.…

  4. Ultrasonic stair case array for NDE (United States)

    Oliver, K.; Tittmann, B. R.; Kropf, M.


    In this paper we present the results on the design of a unique two-dimensional phased array with low channel applications for imaging defects on a metal surface. First, basic transducer calculations will be shown. Followed by the results of important phased array variables, such as focusing, and angle beam sweeping ability, The final design will be given. Next the computer simulation results will be discussed. These results will indicate the performance of the actual array. The second half of the paper will be devoted to a discussion on the phased array testing results with a demonstration phased array.

  5. Beam combining of quantum cascade laser arrays. (United States)

    Lee, Benjamin G; Kansky, Jan; Goyal, Anish K; Pflügl, Christian; Diehl, Laurent; Belkin, Mikhail A; Sanchez, Antonio; Capasso, Federico A


    Wavelength beam combining was used to co-propagate beams from 28 elements in an array of distributed-feedback quantum cascade lasers (DFB-QCLs). The beam-quality product of the array, defined as the product of near-field spot size and far-field divergence for the entire array, was improved by a factor of 21 by using wavelength beam combining. To demonstrate the applicability of wavelength beam combined DFB-QCL arrays for remote sensing, we obtained the absorption spectrum of isopropanol at a distance of 6 m from the laser array.

  6. Acoustic array systems theory, implementation, and application

    CERN Document Server

    Bai, Mingsian R; Benesty, Jacob


    Presents a unified framework of far-field and near-field array techniques for noise source identification and sound field visualization, from theory to application. Acoustic Array Systems: Theory, Implementation, and Application provides an overview of microphone array technology with applications in noise source identification and sound field visualization. In the comprehensive treatment of microphone arrays, the topics covered include an introduction to the theory, far-field and near-field array signal processing algorithms, practical implementations, and common applic

  7. Silver nanorod arrays for photocathode applications

    Energy Technology Data Exchange (ETDEWEB)

    Vilayurganapathy, Subramanian [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Western Michigan Univ., Kalamazoo MI (United States); Nandasiri, Manjula I. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Western Michigan Univ., Kalamazoo MI (United States); Joly, Alan G. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); El-Khoury, Patrick Z. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Varga, Tamas [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Coffey, Greg W. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Schwenzer, Birgit [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Pandey, Archana [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Kayani, Asghar N. [Western Michigan Univ., Kalamazoo MI (United States); Hess, Wayne P. [Pacific Northwest National Lab. (PNNL), Richland, WA (United States); Thevuthasan, Suntharampillai [Pacific Northwest National Lab. (PNNL), Richland, WA (United States)


    In this study, we explore the possibility of using plasmonic Ag nanorod arrays featuring enhanced photoemission as high-brightness photocathode material. Silver nanorod arrays are synthesized by the DC electrodeposition method and their dimensionality, uniformity, crystallinity and oxide/impurity content are characterized. These Ag nanorod arrays exhibit greatly enhanced two-photon photoemission under 400 nm femtosecond pulsed laser excitation. Plasmonic field enhancement in the array produces photoemission hot spots that are mapped using photoemission electron microscopy (PEEM). The relative photoemission enhancement of nanorod array hot spots relative to that of a flat Ag thin film is found to range between 102 and 3 x 103.

  8. Multipath Array Processing for Co-Prime and Under-Sampled Sensor Arrays (United States)


    Sampled Sensor Arrays David Smith Dept. of Electrical and Computer Engineering Duke University, Box 90291 Durham, NC 27708 phone: (919) 660-5419...are 1) the development of signal processing for co-prime sampled sensor arrays in towed array scenarios and 2) in co-prime active sonar signal designs...motivated by dualities that exist between spatial arrays and temporal spectra. OBJECTIVES A feature of co-prime sensor arrays is that they

  9. The Expanding Polity: Theorizing the Links between Expanded Higher Education and the New Politics of the Post-1970s (United States)

    Kamens, David H.


    In this article, I argue that the expansion of higher education worldwide has had important effects in restructuring the political system of affluent democracies. A large literature has developed that describes how democracy has been "downsized" (e.g., lower voting rates). This, I argue, is one impact of expanded higher education. But there is…

  10. Coupling Between Waveguide-Fed Slot Arrays (United States)

    Rengarajan, Sembiam


    Coupling between two waveguide-fed planar slot arrays has been investigated using full-wave analysis. The analysis employs the method-of-moments solution to the pertinent coupled integral equations for the aperture electric field of all slots. In order to compute coupling between two arrays, the input port of the first array is excited with a TE(sub 10) mode wave while the second one is match-terminated. After solving the moment method matrix equations, the aperture fields of all slots are obtained and thereby the TE(sub 10) mode wave received at the input port of the second array is determined. Coupling between two arrays is the ratio of the wave amplitude arriving in the second array port to the incident wave amplitude at the first array port. The coupling mechanism has been studied as a function of spacing between arrays in different directions, e.g. the electric field plane, the magnetic field plane, and the diagonal plane. Computed coupling values are presented for different array geometries. This work is novel since it provides a good understanding of coupling between waveguide-fed slot arrays as a function of spacing and orientation for different aperture distributions and array architectures. This serves as a useful tool for antenna design engineers and system engineers.

  11. International ultraviolet explorer solar array power degradation (United States)

    Day, J. H., Jr.


    The characteristic electrical performance of each International Ultraviolet Explorer (IUE) solar array panel is evaluated as a function of several prevailing variables (namely, solar illumination, array temperature and solar cell radiation damage). Based on degradation in the current-voltage characteristics of the array due to solar cell damage accumulated over time by space charged particle radiations, the available IUE solar array power is determined for life goals up to 10 years. Best and worst case calculations are normalized to actual IUE flight data (available solar array power versus observatory position) to accurately predict the future IUE solar array output. It is shown that the IUE solar array can continue to produce more power than is required at most observatory positions for at least 5 more years.

  12. Delamination Detection Using Guided Wave Phased Arrays (United States)

    Tian, Zhenhua; Yu, Lingyu; Leckey, Cara


    This paper presents a method for detecting multiple delaminations in composite laminates using non-contact phased arrays. The phased arrays are implemented with a non-contact scanning laser Doppler vibrometer (SLDV). The array imaging algorithm is performed in the frequency domain where both the guided wave dispersion effect and direction dependent wave properties are considered. By using the non-contact SLDV array with a frequency domain imaging algorithm, an intensity image of the composite plate can be generated for delamination detection. For the proof of concept, a laboratory test is performed using a non-contact phased array to detect two delaminations (created through quasi-static impact test) at different locations in a composite plate. Using the non-contact phased array and frequency domain imaging, the two impact-induced delaminations are successfully detected. This study shows that the non-contact phased array method is a potentially effective method for rapid delamination inspection in large composite structures.

  13. New fabrication and applications of carbohydrate arrays. (United States)

    Huang, Gangliang; Chen, Xin; Xiao, Feng


    Carbohydrate arrays are used as high-throughput screening platforms to study the carbohydrate-mediated recognition events for glycobiology. The polysaccharide arrays are easy to fabricate by non-covalently or covalently immobilizing polysaccharides onto array surfaces because polysaccharides have hydrophobic interactions. Oligosaccharides must be derived and covalently or non-covalently immobilized onto array surfaces to fabricate oligosaccharide arrays because they have hydrophilic interactions. At the moment, carbohydrate arrays are mainly used to study the carbohydrate-protein interactions and carbohydrate-binding lectins or antibodies, which are possible to be applied to clinics and diagnoses. This review mainly summed up the new fabrication strategies of carbohydrate arrays and their applications in recent four years.

  14. Dynamics and function of compact nucleosome arrays. (United States)

    Poirier, Michael G; Oh, Eugene; Tims, Hannah S; Widom, Jonathan


    The packaging of eukaryotic DNA into chromatin sterically occludes polymerases, recombinases and repair enzymes. How chromatin structure changes to allow their actions is unknown. We constructed defined fluorescently labeled trinucleosome arrays, allowing analysis of chromatin conformational dynamics via fluorescence resonance energy transfer (FRET). The arrays undergo reversible Mg2+-dependent folding similar to that of longer arrays studied previously. We define two intermediate conformational states in the reversible folding of the nucleosome arrays and characterize the microscopic rate constants. Nucleosome arrays are highly dynamic even when compact, undergoing conformational fluctuations on timescales in the second to microsecond range. Compact states of the arrays allow binding to DNA within the central nucleosome via site exposure. Protein binding can also drive decompaction of the arrays. Thus, our results reveal multiple modes by which spontaneous chromatin fiber dynamics allow for the invasion and action of DNA-processing protein complexes.

  15. Acoustic Eaton lens array and its fluid application (United States)

    Kim, Sang-Hoon; Sy, Pham-Van; Das, Mukunda P.


    A principle of an acoustic Eaton lens array and its application as a removable tsunami wall is proposed theoretically. The lenses are made of expandable rubber pillars or balloons and create a stop-band by rotating the incoming tsunami wave and reduce the pressure by canceling each other. The diameter of each lens is larger than the wavelength of the tsunami near the coast, that is, order of a kilometer. The impedance matching on the border of the lenses results in a little reflection. Before a tsunami, the balloons are buried underground in shallow water near the coast in folded or rounded form. Upon sounding of the tsunami alarm, water and air are pumped into the pillars, which expand and erect the wall above the sea level within a few hours. After the tsunami, the water and air are released from the pillars, which are then buried underground for reuse. Electricity is used to power the entire process. A numerical simulation with a linear tsunami model was carried out.

  16. Use of functional gene arrays for elucidating in situ biodegradation

    Directory of Open Access Journals (Sweden)

    Joy D. Van Nostrand


    Full Text Available Microarrays have revolutionized the study of microbiology by providing a high-throughput method for examining thousands of genes with a single test and overcome the limitations of many culture-independent approaches. Functional gene arrays (FGA probe a wide range of genes involved in a variety of functions of interest to microbial ecology (e.g., carbon degradation, N-fixation, metal resistance from many different microorganisms, cultured and uncultured. The most comprehensive FGA to date is the GeoChip array, which targets tens of thousands of genes involved in the geochemical cycling of carbon, nitrogen, phosphorus, and sulphur, metal resistance and reduction, energy processing, antibiotic resistance and contaminant degradation as well as phylogenetic information (gyrB. Since the development of GeoChips, many studies have been performed using this FGA and have shown it to be a powerful tool for rapid, sensitive and specific examination of microbial communities in a high-throughput manner. As such, the GeoChip is well-suited for linking geochemical processes with microbial community function and structure. This technology has been used successfully to examine microbial communities before, during and after in situ bioremediation at a variety of contaminated sites. These studies have expanded our understanding of biodegradation and bioremediation processes and the associated microorganisms and environmental conditions responsible. This review provides an overview of FGA development with a focus on the GeoChip and highlights specific GeoChip studies involving in situ bioremediation.

  17. Non-volatile resistive photo-switches for flexible image detector arrays (United States)

    Nau, Sebastian; Wolf, Christoph; Sax, Stefan; List-Kratochvil, Emil J. W.


    The increasing quest to find lightweight, conformable or flexible image detectors for machine vision or medical imaging brings organic electronics into the spotlight for these fields of application. Here were we introduce a unique imaging device concept and its utilization in an organic, flexible detector array with simple passive matrix wiring. We present a flexible organic image detector array built up from non-volatile resistive multi-bit photo-switchable elements. This unique realization is based on an organic photodiode combined with an organic resistive memory device wired in a simple crossbar configuration. The presented concept exhibits significant advantages compared to present organic and inorganic detector array technologies, facilitating the detection and simultaneous storage of the image information in one detector pixel, yet also allowing for simple read-out of the information from a simple passive-matrix crossbar wiring. This concept is demonstrated for single photo-switchable pixels as well as for arrays with sizes up to 32 by 32 pixels (1024 bit). The presented results pave the way for a versatile flexible and easy-to-fabricate sensor array technology. In a final step, the concept was expanded to detection of x-rays.

  18. Neutron Generation and Kinetic Energy of Expanding Laser Plasmas

    Institute of Scientific and Technical Information of China (English)

    HUANG Yong-Sheng; WANG Nai-Yan; DUAN Xiao-Jiao; LAN Xiao-Fei; TAN Zhi-Xin; TANG Xiu-Zhang; HE Ye-Xi


    We investigate the kinetic energy of expanding plasma of a solid target heated by a ultra-short and ultra-intense laser pulse and the efficiency of energy coupling between the ultra-intense laser pulse and the solid target, in order to increase the utilization ratio of laser energy and to raise the neutron generation farther. Some new ideas about improving the energy utilization by head-on collisions between the expanding plasmas are proposed. The significance is the raise of generation of shorter duration neutron, of the order of picoseconds, which allows for an increase of energy resolution in time-of-flight experiments and also for the investigation of the dynamics of nuclear processes with high temporal resolution.

  19. Design of Modern Reactors for Synthesis of Thermally Expanded Graphite (United States)

    Strativnov, Eugene V.


    One of the most progressive trends in the development of modern science and technology is the creation of energy-efficient technologies for the synthesis of nanomaterials. Nanolayered graphite (thermally exfoliated graphite) is one of the key important nanomaterials of carbon origin. Due to its unique properties (chemical and thermal stability, ability to form without a binder, elasticity, etc.), it can be used as an effective absorber of organic substances and a material for seal manufacturing for such important industries as gas transportation and automobile. Thermally expanded graphite is a promising material for the hydrogen and nuclear energy industries. The development of thermally expanded graphite production is resisted by high specific energy consumption during its manufacturing and by some technological difficulties. Therefore, the creation of energy-efficient technology for its production is very promising.

  20. Expanded microchannel heat exchanger: design, fabrication and preliminary experimental test

    CERN Document Server

    Denkenberger, David C; Pearce, Joshua M; Zhai, John; 10.1177/0957650912442781


    This paper first reviews non-traditional heat exchanger geometry, laser welding, practical issues with microchannel heat exchangers, and high effectiveness heat exchangers. Existing microchannel heat exchangers have low material costs, but high manufacturing costs. This paper presents a new expanded microchannel heat exchanger design and accompanying continuous manufacturing technique for potential low-cost production. Polymer heat exchangers have the potential for high effectiveness. The paper discusses one possible joining method - a new type of laser welding named "forward conduction welding," used to fabricate the prototype. The expanded heat exchanger has the potential to have counter-flow, cross-flow, or parallel-flow configurations, be used for all types of fluids, and be made of polymers, metals, or polymer-ceramic precursors. The cost and ineffectiveness reduction may be an order of magnitude or more, saving a large fraction of primary energy. The measured effectiveness of the prototype with 28 micro...

  1. Opportunities for synthetic biology in antibiotics: expanding glycopeptide chemical diversity. (United States)

    Thaker, Maulik N; Wright, Gerard D


    Synthetic biology offers a new path for the exploitation and improvement of natural products to address the growing crisis in antibiotic resistance. All antibiotics in clinical use are facing eventual obsolesce as a result of the evolution and dissemination of resistance mechanisms, yet there are few new drug leads forthcoming from the pharmaceutical sector. Natural products of microbial origin have proven over the past 70 years to be the wellspring of antimicrobial drugs. Harnessing synthetic biology thinking and strategies can provide new molecules and expand chemical diversity of known antibiotic scaffolds to provide much needed new drug leads. The glycopeptide antibiotics offer paradigmatic scaffolds suitable for such an approach. We review these strategies here using the glycopeptides as an example and demonstrate how synthetic biology can expand antibiotic chemical diversity to help address the growing resistance crisis.

  2. Basic Study on Engine with Scroll Compressor and Expander (United States)

    Morishita, Etsuo; Kitora, Yoshihisa; Nishida, Mitsuhiro

    Scroll compressors are becoming popular in air conditioning and refrigeration. This is primarily due to their higher efficiency and low noise/vibration characteristics. The scroll principle can be applied also to the steam expander and the Brayton cycle engine,as shown in the past literature. The Otto cycle spark-ignition engine with a scroll compressor and expander is studied in this report. The principle and basic structure of the scroll engine are explained,and the engine characteristic are calculated based on the idealized cycles and processes. A prototype model has been proposed and constructed. The rotary type engine has always had a problem with sealing. The scroll engine might overcome this shortcoming with its much lower rubbing speed compared to its previous counterparts,and is therefore worth investigating.

  3. Bigelow Expandable Activity Module (BEAM) - ISS Inflatable Module Technology Demonstration (United States)

    Dasgupta, Rajib; Munday, Steve; Valle, Gerard D.


    INNOVATION: BEAM is a pathway project demonstrating the design, fabrication, test, certification, integration, operation, on-orbit performance, and disposal of the first ever man-rated space inflatable structure. The groundwork laid through the BEAM project will support developing and launching a larger inflatable space structure with even greater mass per volume (M/V) advantages need for longer space missions. OVERVIEW: Inflatable structures have been shown to have much lower mass per volume ratios (M/V) when compared with conventional space structures. BEAM is an expandable structure, launched in a packed state, and then expanded once on orbit. It is a temporary experimental module to be used for gathering structural, thermal, and radiation data while on orbit. BEAM will be launched on Space X-8, be extracted from the dragon trunk, and will attach to ISS at Node 3- Aft. BEAM performance will be monitored over a two-year period and then BEAM will be jettison using the SSRMS.

  4. Expanding Earth and Static Universe: Two Papers of 1935

    CERN Document Server

    Kragh, Helge


    The German-born astronomer Jacob K. E. Halm (1866-1944) wrote in 1935 two papers on quite different subjects, one an astrophysically based argument for the expanding Earth and the other a no less original attempt to explain the galactic redshifts on the basis of a static universe. Of course, Halm was wrong in both cases. The second of the papers is reproduced in toto and compared to other early attempts to avoid the expansion of the universe by means of "tired light" explanations of the redshifts. Although often referred to in the literature on the expanding Earth, the content of Halm's first paper is not well known. This article also provides a brief account of Halm's life and scientific career, which included important studies of the solar spectrum (the "limb effect") and the first version of the mass-luminosity relation for stars.

  5. A Simple Model for Simulation of Armature Expanding Process

    Institute of Scientific and Technical Information of China (English)

    杨显俊; 董志伟


    We propose a scheme to simulate the dynamic process of the armature expansion of explosive magnetic flux compression generators. Values of the deflective angle and the velocity of expanding the innermost radius of copper cylinder (or armature) caused by explosives detonation are calculated, which are in good agreement with the experimental data. The calculated results show that there may be some dynamic processes that exist during explosive detonation.

  6. The Hubble party balloon and the expanding universe (United States)

    Zendri, G.; Rosi, T.; Oss, S.


    We show that the metaphor of the inflated balloon used to describe expanding space-time according to the Hubble law can be transformed into a simple laboratory experiment. We obtain, in terms of measured recession speeds and distances of ink dots drawn on a party balloon, easy renditions of various cosmological models, such as the static one and the Einstein-De Sitter universe.

  7. A spectral gap for transer operators of piecewise expanding maps

    CERN Document Server

    Thomine, Damien


    We provide a simplified proof of the existence, under some assumptions, of a spectral gap for the Perron-Frobenius operator of piecewise uniformly expanding maps on Riemannian manifolds when acting on some Sobolev spaces. Its consequences include, among others, the existence of invariant physical measures, and an exponential decay of correlations for suitable observables. These features are then adapted to different function spaces (functions with bounded variation or bounded oscillation), so as to give a new insight of - and generalize - earlier results.

  8. Smoothness of invariant density for expanding transformations in higher dimensions

    Directory of Open Access Journals (Sweden)

    Kourosh Adl-Zarabi


    Full Text Available Let Ω be a bounded region in ℝn and let ={Pi}i=1m be a partition of Ω into a finite number of closed subsets having piecewise C2 boundaries of finite (n−1-dimensional measure. Let τ:Ω→Ω be an expanding transformation on where, τi:τ|Pi, and τi∈CM, m≥2. We show that the τ-invariant density h∈CM−2.

  9. Toy Model for Eternal Expanding Universe Driven by Quintessence

    Institute of Scientific and Technical Information of China (English)

    高长军; 沈有根


    Recent observations of microwave background and type Ⅰa supernovae (SNe Ia) suggest a space-flat and accelerated expansion Universe. On the other hand, observations of supernovae 1997ff reveal that the Universe has undergone a decelerating-accelerating process. Combining these two classes of observations, we present an eternal expanding Universe toy model driven by quintessence. In this picture, the Universe undergoes an endless sequence of accelerating-decelerating cycles.

  10. Expanding the bioluminescent toolkit for in vivo imaging


    Paley, Miranda Amelia


    Bioluminescence imaging (BLI) is among the most dynamic imaging modalities for visualizing whole cells and gene expression patterns in vivo. This technique captures light emission from the luciferase-catalyzed oxidation of small molecule luciferins with highly sensitive CCD cameras. While powerful, current options for multiplexed BLI in mice are limited by the number of luciferase/luciferin pairs found in nature. Our lab aims to expand the bioluminescent toolkit by pairing mutant luciferases ...

  11. Cellular Concrete Bricks with Recycled Expanded Polystyrene Aggregate


    Juan Bosco Hernández-Zaragoza; Teresa López-Lara; Jaime Horta-Rangel; Carlos López-Cajún; Eduardo Rojas-González; García-Rodríguez, F. J.; Jorge Adue


    Cellular concrete bricks were obtained by using a lightweight mortar with recycled expanded polystyrene aggregate instead of sandy materials. After determining the block properties (absorption, compressive strength, and tensile stresses), it was found that this brick meets the requirements of the masonry standards used in Mexico. The obtained material is lighter than the commercial ones, which facilitates their rapid elaboration, quality control, and transportation. It is less permeable, whic...

  12. Strategies for expanding health insurance coverage in vulnerable populations



    Background Health insurance has the potential to improve access to health care and protect people from the financial risks of diseases. However, health insurance coverage is often low, particularly for people most in need of protection, including children and other vulnerable populations. Objectives To assess the effectiveness of strategies for expanding health insurance coverage in vulnerable populations. Search methods We searched Cochrane Central Register of Controlled Trials (CENTRAL), pa...

  13. Tamponade by an expanding left ventricular pseudoaneurysm: A unique presentation. (United States)

    Mahesh, Balakrishnan; Ong, Ping; Kutty, Ramesh; Abu-Omar, Yasir


    Left ventricular free wall rupture secondary to myocardial infarction is an uncommon but catastrophic event requiring emergency surgery. We describe a unique presentation of left ventricular free wall rupture as delayed tamponade caused by a gradually expanding pseudoaneurysm compressing the left atrium, leading to pulmonary congestion that required increasing respiratory support to maintain oxygenation, and necessitated emergency surgery. We discuss the options available to treat pseudoaneurysms due to left ventricular free wall rupture.

  14. Preservation of controllability-observability in expanded systems


    Bakule, Lubomir; Rodellar Benedé, José; Rossell Garriga, Josep Maria; Rubio Díaz, Pedro


    The result contributed by the article is that controllability-observability of an original continuous-time LTI dynamic system can always be simultaneously preserved in expanded systems within the inclusion principle when using block structured complementary matrices. This new structure offers more degrees of freedom for the selection of specific complementary matrices than well known used cases, such as aggregations and restrictions, which enable such preservation only in certain special case...

  15. Development of Self-Expanding Idealflo (tm) Sandcontrol Technology

    Energy Technology Data Exchange (ETDEWEB)

    Jeff A. Spray


    Development of Self-Expanding Idealflo{trademark} Sandscreen Technology was a successfully executed design-by-analysis through field demonstration project. This final report is presented as a two-part progression of concept development and manufacturing activities. The first part, conceptual development activities, discusses novel specifications creation and non-linear analytical design generation. The second part, manufacturing, contains achievement related information for detailed-design, fabrication, mechanical testing, and field demonstration activities.

  16. Systematic Shared Value in Finance: Expanding Porter's Approach


    Marta Rocchi; Ignacio Ferrero


    The publication of Michael Porter and Mark Kramer's Creating Shared Value (Harvard Business Review, 2011) challenges both the academic literature on corporate social responsibility as well as business practice. Porter and Kramer argue that there is a better way of integrating social goals within business practice, without distracting a firm from its primary purpose of achieving profit. This paper aims to expand Porter and Kramer's approach and to apply the shared value model to the financial ...

  17. Discovery of an expanding molecular bubble in Orion BN/KL

    CERN Document Server

    Zapata, Luis A; Schmid-Burgk, Johannes; Rodriguez, Luis F; Ho, Paul; Patel, Nimesh A


    During their infancy, stars are well known to expel matter violently in the form of well-defined, collimated outflows. A fairly unique exception is found in the Orion BN/KL star-forming region where a poorly collimated and somewhat disordered outflow composed of numerous elongated ``finger-like'' structures was discovered more than 30 years ago. In this letter, we report the discovery in the same region of an even more atypical outflow phenomenon. Using $^{13}$CO(2-1) line observations made with the Submillimeter Array (SMA), we have identified there a 500 to 1,000 years old, expanding, roughly spherically symmetric bubble whose characteristics are entirely different from those of known outflows associated with young stellar objects. The center of the bubble coincides with the initial position of a now defunct massive multiple stellar system suspected to have disintegrated 500 years ago, and with the center of symmetry of the system of molecular fingers surrounding the Kleinmann-Low nebula. We hypothesize tha...

  18. rasdaman Array Database: current status (United States)

    Merticariu, George; Toader, Alexandru


    rasdaman (Raster Data Manager) is a Free Open Source Array Database Management System which provides functionality for storing and processing massive amounts of raster data in the form of multidimensional arrays. The user can access, process and delete the data using SQL. The key features of rasdaman are: flexibility (datasets of any dimensionality can be processed with the help of SQL queries), scalability (rasdaman's distributed architecture enables it to seamlessly run on cloud infrastructures while offering an increase in performance with the increase of computation resources), performance (real-time access, processing, mixing and filtering of arrays of any dimensionality) and reliability (legacy communication protocol replaced with a new one based on cutting edge technology - Google Protocol Buffers and ZeroMQ). Among the data with which the system works, we can count 1D time series, 2D remote sensing imagery, 3D image time series, 3D geophysical data, and 4D atmospheric and climate data. Most of these representations cannot be stored only in the form of raw arrays, as the location information of the contents is also important for having a correct geoposition on Earth. This is defined by ISO 19123 as coverage data. rasdaman provides coverage data support through the Petascope service. Extensions were added on top of rasdaman in order to provide support for the Geoscience community. The following OGC standards are currently supported: Web Map Service (WMS), Web Coverage Service (WCS), and Web Coverage Processing Service (WCPS). The Web Map Service is an extension which provides zoom and pan navigation over images provided by a map server. Starting with version 9.1, rasdaman supports WMS version 1.3. The Web Coverage Service provides capabilities for downloading multi-dimensional coverage data. Support is also provided for several extensions of this service: Subsetting Extension, Scaling Extension, and, starting with version 9.1, Transaction Extension, which

  19. Coated carbon nanotube array electrodes (United States)

    Ren, Zhifeng; Wen, Jian; Chen, Jinghua; Huang, Zhongping; Wang, Dezhi


    The present invention provides conductive carbon nanotube (CNT) electrode materials comprising aligned CNT substrates coated with an electrically conducting polymer, and the fabrication of electrodes for use in high performance electrical energy storage devices. In particular, the present invention provides conductive CNTs electrode material whose electrical properties render them especially suitable for use in high efficiency rechargeable batteries. The present invention also provides methods for obtaining surface modified conductive CNT electrode materials comprising an array of individual linear, aligned CNTs having a uniform surface coating of an electrically conductive polymer such as polypyrrole, and their use in electrical energy storage devices.

  20. The collinear coaxial array antenna (United States)

    Brammer, D. J.; Williams, D.


    A design of a coaxial vertical antenna proposed in the ARRL antenna handbook is analyzed. A numerical analysis was carried out using the moment method. A variety of antenna configurations in the 160 MHz design frequency are analyzed and current distribution, gain, polar diagrams and impedances are calculated. The analysis is carried out for simple configurations and extended to a case with 16 repeated center sections. The effects of using lossy cable in the construction is also investigated. A defect in the original ARRL design is rectified. An array of an overall length 5.33 wavelengths is shown to have a gain of 10.69 dB.

  1. Sentinel-3 Solar Array Design (United States)

    Combet, Y.; Reutenauer, X.; Mouret, G.; Guerrere, S.; Ergan, A.; Ferrando, E.; Riva, S.; Hodgetts, P.; Levesque, D.; D'Accolti, G.


    Sentinel-3 is primarily a mission to support services relating to the marine environment, with capability to serve numerous land-, atmospheric- and cryospheric- based application areas. The mission's main objective is to determine parameters, such as sea-surface topography, sea- and land-surface temperatures, as well as ocean- and land-surface colours with high-end accuracy and reliability. For this mission, Thales Alenia Space has been selected as the spacecraft prime contractor and is also responsible for the solar array. In this frame, TAS leads a European industrial team, comprising Selex Galileo for the photovoltaic assembly and Patria for the panel substrate.

  2. Quantification assays for total and polyglutamine-expanded huntingtin proteins.

    Directory of Open Access Journals (Sweden)

    Douglas Macdonald

    Full Text Available The expansion of a CAG trinucleotide repeat in the huntingtin gene, which produces huntingtin protein with an expanded polyglutamine tract, is the cause of Huntington's disease (HD. Recent studies have reported that RNAi suppression of polyglutamine-expanded huntingtin (mutant HTT in HD animal models can ameliorate disease phenotypes. A key requirement for such preclinical studies, as well as eventual clinical trials, aimed to reduce mutant HTT exposure is a robust method to measure HTT protein levels in select tissues. We have developed several sensitive and selective assays that measure either total human HTT or polyglutamine-expanded human HTT proteins on the electrochemiluminescence Meso Scale Discovery detection platform with an increased dynamic range over other methods. In addition, we have developed an assay to detect endogenous mouse and rat HTT proteins in pre-clinical models of HD to monitor effects on the wild type protein of both allele selective and non-selective interventions. We demonstrate the application of these assays to measure HTT protein in several HD in vitro cellular and in vivo animal model systems as well as in HD patient biosamples. Furthermore, we used purified recombinant HTT proteins as standards to quantitate the absolute amount of HTT protein in such biosamples.

  3. Polypropylenes foam consisting of thermally expandable microcapsule as blowing agent (United States)

    Jeoung, Sun Kyung; Hwang, Ye Jin; Lee, Hyun Wook; Kwak, Sung Bok; Han, In-Soo; Ha, Jin Uk


    The structure of thermally expandable microcapsule (TEMs) is consisted of a thermoplastic shell which is filled with liquid hydrocarbon at core. The shell of TEMs becomes soft when the temperature is higher than boiling temperature of liquid hydrocarbon. The shell of TEMs is expanded under the high temperature because the inner pressure of TEMs is increased by vaporization of hydrocarbon core. Therefore, the TEMs are applicable for blowing agents and light weight fillers. In this research, we fabricated the polypropylene (PP) foam by using the TEMs and chemical blowing agents and compared to their physical properties. The density of the specimen was decreased when the contents of chemical blowing agents and TEMs were increased. In addition, the mechanical properties (i.e. tensile strength and impact strength) of specimens were deteriorated with increasing amount of chemical blowing agents and TEMs. However, PP foam produced with TEMs showed higher impact strength than the one with the chemical blowing agent. In order to clarify the dependence of impact strength of PP foam as the blowing agent, the morphology difference of the PP foams was investigated. Expanding properties of PP foams produced with TEMs was changed with TEMs content of PP foams. Processing conditions also influenced the mechanical properties of PP foam containing TEMs.

  4. Strain rate dependency and fragmentation pattern of expanding warheads

    Directory of Open Access Journals (Sweden)

    John F. Moxnes


    Full Text Available For the characterization of the behaviors of a metal material in events like expanding warheads, it is necessary to know its strength and ductility at high strain rates, around 104–105/s. The flyer plate impact testing produces the uniform stress and strain rates but the testing is expensive. The Taylor test is relatively inexpensive but produces non-uniform stress and strain fields, and the results are not so easily inferred for material modeling. In the split-Hopkinson bar (SHB, which may be used in compression, tension and torsion testing, the strain rates never exceeds 103/s. In the present work, we use the expanding ring test where the strain rate is 104–105/s. A streak camera is used to examine the expanding ring velocity, and a water tank is used to collect the fragments. The experimental results are compared with the numerical simulations using the hydrocodes AUTODYN, IMPETUS Afea and a regularized smooth particle (RSPH software. The number of fragments increases with the increase in the expansion velocity of the rings. The number of fragments is similar to the experimental results. The RSPH software shows much the same results as the AUTODYN where the Lagrangian solver is used for the ring. The IMPETUS Afea solver shows a somewhat different fragmentation characteristic due to the node splitting algorithm that induces pronounced tensile splitting.

  5. An expanded prescribing role for pharmacists – an Australian perspective

    Directory of Open Access Journals (Sweden)

    Kreshnik Hoti


    Full Text Available Expanded pharmacist prescribing is a new professionalpractice area for pharmacists. Currently, Australianpharmacists’ prescribing role is limited to over-the-countermedications. This review aims to identify Australian studiesinvolving the area of expanded pharmacist prescribing.Australian studies exploring the issues of pharmacistprescribing were identified and considered in the context ofits implementation internationally. Australian studies havemainly focused on the attitudes of community and hospitalpharmacists towards such an expansion. Studies evaluatingthe views of Australian consumers and pharmacy clients werealso considered. The available Australian literature indicatedsupport from pharmacists and pharmacy clients for anexpanded pharmacist prescribing role, with preference fordoctors retaining a primary role in diagnosis. Australianpharmacists and pharmacy client’s views were also inagreement in terms of other key issues surrounding expandedpharmacist prescribing. These included the nature of anexpanded prescribing model, the need for additional trainingfor pharmacists and the potential for pharmacy clients gainingimproved medication access, which could be achieved withinan expanded role that pharmacists could provide. Currentevidence from studies conducted in Australia providesvaluable insight to relevant policymakers on the issue ofpharmacist prescribing in order to move the agenda ofpharmacist prescribing forwards.

  6. Stability of stagnation via an expanding accretion shock wave

    CERN Document Server

    Velikovich, A L; Taylor, B D; Giuliani, J L; Zalesak, S T; Iwamoto, Y


    Stagnation of a cold plasma streaming to the center or axis of symmetry via an expanding accretion shock wave is ubiquitous in inertial confinement fusion (ICF) and high-energy-density plasma physics, the examples ranging from plasma flows in x-ray-generating Z pinches [Y. Maron et al., Phys. Rev. Lett. 111, 035001 (2013)] to the experiments in support of the recently suggested concept of impact ignition in ICF [H. Azechi et al., Phys. Rev. Lett. 102, 235002 (2009); M. Murakami et al., Nucl. Fusion 54, 054007 (2014)]. Some experimental evidence indicates that stagnation via an expanding shock wave is stable, but its stability has never been studied theoretically. We present such analysis for the stagnation that does not involve a rarefaction wave behind the expanding shock front and is described by the classic ideal-gas Noh solution in spherical and cylindrical geometry. In either case the stagnated flow has been demonstrated to be stable, initial perturbations exhibiting a power-law, oscillatory or monotonic...

  7. Stability of stagnation via an expanding accretion shock wave (United States)

    Velikovich, A. L.; Murakami, M.; Taylor, B. D.; Giuliani, J. L.; Zalesak, S. T.; Iwamoto, Y.


    Stagnation of a cold plasma streaming to the center or axis of symmetry via an expanding accretion shock wave is ubiquitous in inertial confinement fusion (ICF) and high-energy-density plasma physics, the examples ranging from plasma flows in x-ray-generating Z pinches [Maron et al., Phys. Rev. Lett. 111, 035001 (2013)] to the experiments in support of the recently suggested concept of impact ignition in ICF [Azechi et al., Phys. Rev. Lett. 102, 235002 (2009); Murakami et al., Nucl. Fusion 54, 054007 (2014)]. Some experimental evidence indicates that stagnation via an expanding shock wave is stable, but its stability has never been studied theoretically. We present such analysis for the stagnation that does not involve a rarefaction wave behind the expanding shock front and is described by the classic ideal-gas Noh solution in spherical and cylindrical geometry. In either case, the stagnated flow has been demonstrated to be stable, initial perturbations exhibiting a power-law, oscillatory or monotonic, decay with time for all the eigenmodes. This conclusion has been supported by our simulations done both on a Cartesian grid and on a curvilinear grid in spherical coordinates. Dispersion equation determining the eigenvalues of the problem and explicit formulas for the eigenfunction profiles corresponding to these eigenvalues are presented, making it possible to use the theory for hydrocode verification in two and three dimensions.

  8. On Dark Energy and Matter of the Expanding Universe

    Directory of Open Access Journals (Sweden)

    Lehnert B.


    Full Text Available At present the expanding universe is observed to be dominated by the not fully under- stood concepts of dark energy and matter, in a conceived almost flat Euclidian geometry. As one of the possible efforts to understand the global behaviour of the expanding uni- verse, the present paper attempts to explain these concepts in terms of the pressure force and gravity of a spherical photon gas cloud of zero point energy, in a flat geometry. A difficult point of the conventional theory concerns the frequency distribution of the zero point energy oscillations which leads to the unacceptable result of an infinite total en- ergy per unit volume. A modification of this distribution is therefore proposed which results in finite energy density. A corresponding equilibrium state is investigated, as well as small dynamic deviations from it, to form a basis for a model of the expanding universe. Provided that the crucial points of the present approach hold true, the model satisfies the requirements of cosmic linear dimensions, results in an estimated accelera- tion of the expansion being of the order of the observed one, presents a possible solution of the coincidence problem of dark energy and matter, and provides one of the possible explanations of the observed excess of high-energy electrons and positrons in recent balloon and satellite experiments.

  9. Long-term consequences of observing an expanding cosmological civilization

    CERN Document Server

    Olson, S Jay


    Suppose that advanced civilizations, separated by a cosmological distance and time, wish to maximize their access to cosmic resources by rapidly expanding into the universe. What sort of boundary forms between their expanding domains, and how does the presence of one limit the ambitions of another? We describe a general case for any expansion speed, separation distance, and time. We then specialize to the main question of interest. How are the future prospects for a young and ambitious civilization altered if they can observe the presence of another at a cosmological distance? We treat cases involving the observation of one or two expanding domains. In the single-observation case, we find that almost any plausible detection will be limiting to some extent. Also, practical technological limits to expansion speed (well below the speed of light) play an interesting role. If a domain is visible at the time one embarks on expansion, there exists an optimum value for the "practical speed limit," and if the speed li...

  10. Strain rate dependency and fragmentation pattern of expanding warheads

    Institute of Scientific and Technical Information of China (English)



    For the characterization of the behaviors of a metal material in events like expanding warheads, it is necessary to know its strength and ductility at high strain rates, around 104e105/s. The flyer plate impact testing produces the uniform stress and strain rates but the testing is expensive. The Taylor test is relatively inexpensive but produces non-uniform stress and strain fields, and the results are not so easily inferred for material modeling. In the split-Hopkinson bar (SHB), which may be used in compression, tension and torsion testing, the strain rates never exceeds 103/s. In the present work, we use the expanding ring test where the strain rate is 104e105/s. A streak camera is used to examine the expanding ring velocity, and a water tank is used to collect the fragments. The experimental results are compared with the numerical simulations using the hydrocodes AUTODYN, IMPETUS Afea and a regularized smooth particle (RSPH) software. The number of fragments increases with the increase in the expansion velocity of the rings. The number of fragments is similar to the experimental results. The RSPH software shows much the same results as the AUTODYN where the Lagrangian solver is used for the ring. The IMPETUS Afea solver shows a somewhat different fragmentation characteristic due to the node splitting algorithm that induces pronounced tensile splitting.

  11. Station characteristics of the Singapore Infrasound Array (United States)

    Perttu, Anna; Taisne, Benoit; Caudron, Corentin; Garces, Milton; Avila Encillo, Jeffrey; Ildefonso, Sorvigenaleon


    Singapore, located in Southeast Asia, presents an ideal location for an additional regional infrasound array, with diverse persistent natural and anthropogenic regional infrasound sources, including ~750 active or potentially active volcanoes within 4,000 kilometers. Previous studies have focused on theoretical and calculated regional signal detection capability improvement with the addition of a Singapore array. The Earth Observatory of Singapore installed a five element infrasound array in northcentral Singapore in late 2014, and this station began consistent real-time data transmission mid-2015. The Singapore array uses MB2005s microbarometers and Nanometrics Taurus digitizers. Automated array processing is carried out with the INFrasonic EneRgy Nth Octave (INFERNO) energy estimation suite, and PMCC (Progressive MultiChannel Correlation). The addition of the Singapore infrasound array to the existing International Monitoring System (IMS) infrasound stations in the region has increased regional infrasound detection capability, which is illustrated with the preliminary work on three observed meteor events of various sizes in late 2015. A meteor observed in Bangkok, Thailand in early September, 2015 was picked up by the CTBTO, however, another meteor observed in Bangkok in November was only recorded on the Singapore array. Additionally, another meteor observed over Sumatra was only recorded by one IMS station and the Singapore array. This study uses array processing and Power Spectral Density results for both the Singapore and publicly available regional IMS stations to examine station characteristics and detection capability of the Singapore array in the context of the regional IMS network.

  12. Environmental Assessment Expanded Ponnequin Wind Energy Project Weld County, Colorado

    Energy Technology Data Exchange (ETDEWEB)



    The U.S.Department of Energy (DOE) has considered a proposal from the State of Colorado, Office of Energy Conservation (OEC), for funding construction of the Expanded Ponnequin Wind Project in Weld County, Colorado. OEC plans to enter into a contracting arrangement with Public Service Company of Colorado (PSCO) for the completion of these activities. PSCo, along with its subcontractors and business partners, are jointly developing the Expanded Ponnequin Wind Project. DOE completed an environmental assessment of the original proposed project in August 1997. Since then, the geographic scope and the design of the project changed, necessitating additional review of the project under the National Environmental Policy Act. The project now calls for the possible construction of up to 48 wind turbines on State and private lands. PSCo and its partners have initiated construction of the project on private land in Weld County, Colorado. A substation, access road and some wind turbines have been installed. However, to date, DOE has not provided any funding for these activities. DOE, through its Commercialization Ventures Program, has solicited applications for financial assistance from state energy offices, in a teaming arrangement with private-sector organizations, for projects that will accelerate the commercialization of emerging renewable energy technologies. The Commercialization Ventures Program was established by the Renewable Energy and Energy Efficiency Technology Competitiveness Act of 1989 (P.L. 101-218) as amended by the Energy Policy Act of 1992 (P.L. 102-486). The Program seeks to assist entry into the marketplace of newly emerging renewable energy technologies, or of innovative applications of existing technologies. In short, an emerging renewable energy technology is one which has already proven viable but which has had little or no operational experience. The Program is managed by the Department of Energy, Office of Energy Efficiency and Renewable Energy. The

  13. One-dimensional Array Grammars and P Systems with Array Insertion and Deletion Rules

    Directory of Open Access Journals (Sweden)

    Rudolf Freund


    Full Text Available We consider the (one-dimensional array counterpart of contextual as well as insertion and deletion string grammars and consider the operations of array insertion and deletion in array grammars. First we show that the emptiness problem for P systems with (one-dimensional insertion rules is undecidable. Then we show computational completeness of P systems using (one-dimensional array insertion and deletion rules even of norm one only. The main result of the paper exhibits computational completeness of one-dimensional array grammars using array insertion and deletion rules of norm at most two.

  14. Expanding e-MERLIN with the Goonhilly Earth Station

    CERN Document Server

    Heywood, I; Beswick, R; Garrington, S T; Hatchell, J; Hoare, M G; Jarvis, M J; Jones, I; Muxlow, T W B; Rawlings, S


    A consortium of universities has recently been formed with the goal of using the decommissioned telecommunications infrastructure at the Goonhilly Earth Station in Cornwall, UK, for astronomical purposes. One particular goal is the introduction of one or more of the ~30-metre parabolic antennas into the existing e-MERLIN radio interferometer. This article introduces this scheme and presents some simulations which quantify the improvements that would be brought to the e-MERLIN system. These include an approximate doubling of the spatial resolution of the array, an increase in its N-S extent with strong implications for imaging the most well-studied equatorial fields, accessible to ESO facilities including ALMA. It also increases the overlap between the e-MERLIN array and the European VLBI Network. We also discuss briefly some niche science areas in which an e-MERLIN array which included a receptor at Goonhilly would be potentially world-leading, in addition to enhancing the existing potential of e-MERLIN in it...

  15. IRAN: interferometric remapped array nulling (United States)

    Aristidi, Eric; Vakili, Farrokh; Abe, Lyu; Belu, Adrian; Lopez, Bruno; Lanteri, Henri; Schutz, A.; Menut, Jean-Luc


    This paper describes a method of beam-combination in the so-called hypertelescope imaging technique recently introduced by Labeyrie in optical interferometry. The method we propose is an alternative to the Michelson pupil reconfiguration that suffers from the loss of the classical object-image convolution relation. From elementary theory of Fourier optics we demonstrate that this problem can be solved by observing in a combined pupil plane instead of an image plane. The point-source intensity distribution (PSID) of this interferometric "image" tends towards a psuedo Airy disc (similar to that of a giant monolithic telescope) for a sufficiently large number of telescopes. Our method is applicable to snap-shot imaging of extended sources with a field comparable to the Airy pattern of single telescopes operated in a co-phased multi-aperture interferometric array. It thus allows to apply conveniently pupil plane coronagraphy. Our technique called Interferometric Remapped Array Nulling (IRAN) is particularly suitable for high dynamic imaging of extra-solar planetary companions, circumstellar nebulosities or extra-galactic objects where long baseline interferometry would closely probe the central regions of AGNs for instance.

  16. Stretchable Micro-Electrode Array

    Energy Technology Data Exchange (ETDEWEB)

    Maghribi, M; Hamilton, J; Polla, D; Rose, K; Wilson, T; Krulevitch, P


    This paper focuses on the design consideration, fabrication processes and preliminary testing of the stretchable micro-electrode array. We are developing an implantable, stretchable micro-electrode array using polymer-based microfabrication techniques. The device will serve as the interface between an electronic imaging system and the human eye, directly stimulating retinal neurons via thin film conducting traces and electroplated electrodes. The metal features are embedded within a thin ({approx}50 micron) substrate fabricated using poly (dimethylsiloxane) (PDMS), a biocompatible elastomeric material that has very low water permeability. The conformable nature of PDMS is critical for ensuring uniform contact with the curved surface of the retina. To fabricate the device, we developed unique processes for metalizing PDMS to produce robust traces capable of maintaining conductivity when stretched (5%, SD 1.5), and for selectively passivating the conductive elements. An in situ measurement of residual strain in the PDMS during curing reveals a tensile strain of 10%, explaining the stretchable nature of the thin metalized devices.

  17. Towards the Long Wavelength Array (United States)

    Kassim, N. E.; Erickson, W. C.


    Nearly three decades ago, the Very Large Array (VLA) opened the cm-wavelength radio sky to high-dynamic range imaging. By developing and exploiting new techniques to mitigate ionospheric phase fluctuations, the VLA 74 MHz system is providing the first sub-arcminute resolution view of the meter-wavelength radio universe. This technical innovation has inspired an emerging suite of much more powerful low-frequency instruments, including the Long Wavelength Array (LWA). The LWA, with its great collecting area (approaching one square kilometer at 20 MHz) and long baselines (up to 400 km), will surpass, by up to 2--3 orders of magnitude, the imaging power of any previous low-frequency interferometer. LWA science goals include Cosmic Evolution, the Acceleration of Relativistic Particles, Plasma Astrophysics, and Ionospheric & Space Weather Science. Because it will explore one of the last and most poorly investigated regions of the spectrum, the potential for unexpected new discoveries is high. For more on the LWA, see The LWA project is led by the University of New Mexico, and includes the Naval Research Laboratory, Applied Research Laboratories of U. Texas, Los Alamos National Laboratory, Virginia Tech, and U. Iowa, with cooperation from the National Radio Astronomy Observatory.

  18. The Ooty Wide Field Array

    Indian Academy of Sciences (India)

    C. R. Subrahmanya; P. K. Manoharan; Jayaram N. Chengalur


    We describe here an ongoing upgrade to the legacy Ooty Radio Telescope (ORT). The ORT is a cylindrical parabolic cylinder 530 m × 30 m in size operating at a frequency of 326.5 (or $z \\sim 3.35$ for the HI 21-cm line). The telescope has been constructed on a North–South hill slope whose gradient is equal to the latitude of the hill, making it effectively equatorially mounted. The feed consists of an array of 1056 dipoles. The key feature of this upgrade is the digitization and cross-correlation of the signals of every set of 4-dipoles. This converts the ORT into a 264 element interferometer with a field-of-view of $ 2^{\\circ} \\times 27.4^{\\circ} \\cos(\\delta)$. This upgraded instrument is called the Ooty Wide Field Array (OWFA). This paper briefly describes the salient features of the upgrade, as well as its main science drivers. There are three main science drivers viz. (1) observations of the large scale distribution of HI in the post-reionization era, (2) studies of the propagation of plasma irregularities through the inner heliosphere and (3) blind surveys for transient sources. More details on the upgrade, as well as on the expected science uses can be found in other papers in this special issue.

  19. Energy transfer in macromolecular arrays (United States)

    Andrews, David L.; Jenkins, Robert D.


    Macromolecular systems comprised of many light-sensitive centres (the photosynthetic unit, dendrimers, and other highly symmetric multichromophore arrays) are important structures offering challenges to theoreticians and synthetic chemists alike. Here we outline novel photophysical interactions predicted and observed in such arrays. Using the tools of molecular quantum electrodynamics (QED) we present quantum amplitudes for a variety of higher-order resonance energy transfer (RET) schemes associated with well-known nonlinear optical effects such as two- and three-photon absorption. The initial analysis is extended to account for situations where the participant donor species are identical and exist in a highly symmetric environment, leading to the possible formation of excitons. It emerges from the QED theory that such excitons are closely associated with the higher-order RET processes. General results are interpreted by analyzing particular molecular architectures which offer interesting features such as rate enhancement or limitation and exciton pathway quenching. Applications in the areas of photosynthesis, molecular logic gates and low-intensity fluorescence energy transfer are predicted.

  20. Correction of linear-array lidar intensity data using an optimal beam shaping approach (United States)

    Xu, Fan; Wang, Yuanqing; Yang, Xingyu; Zhang, Bingqing; Li, Fenfang


    The linear-array lidar has been recently developed and applied for its superiority of vertically non-scanning, large field of view, high sensitivity and high precision. The beam shaper is the key component for the linear-array detection. However, the traditional beam shaping approaches can hardly satisfy our requirement for obtaining unbiased and complete backscattered intensity data. The required beam distribution should roughly be oblate U-shaped rather than Gaussian or uniform. Thus, an optimal beam shaping approach is proposed in this paper. By employing a pair of conical lenses and a cylindrical lens behind the beam expander, the expanded Gaussian laser was shaped to a line-shaped beam whose intensity distribution is more consistent with the required distribution. To provide a better fit to the requirement, off-axis method is adopted. The design of the optimal beam shaping module is mathematically explained and the experimental verification of the module performance is also presented in this paper. The experimental results indicate that the optimal beam shaping approach can effectively correct the intensity image and provide ~30% gain of detection area over traditional approach, thus improving the imaging quality of linear-array lidar.