WorldWideScience

Sample records for admixture mapping scans

  1. Admixture mapping scans identify a locus affecting retinal vascular caliber in hypertensive African Americans: the Atherosclerosis Risk in Communities (ARIC study.

    Directory of Open Access Journals (Sweden)

    Ching-Yu Cheng

    2010-04-01

    Full Text Available Retinal vascular caliber provides information about the structure and health of the microvascular system and is associated with cardiovascular and cerebrovascular diseases. Compared to European Americans, African Americans tend to have wider retinal arteriolar and venular caliber, even after controlling for cardiovascular risk factors. This has suggested the hypothesis that differences in genetic background may contribute to racial/ethnic differences in retinal vascular caliber. Using 1,365 ancestry-informative SNPs, we estimated the percentage of African ancestry (PAA and conducted genome-wide admixture mapping scans in 1,737 African Americans from the Atherosclerosis Risk in Communities (ARIC study. Central retinal artery equivalent (CRAE and central retinal vein equivalent (CRVE representing summary measures of retinal arteriolar and venular caliber, respectively, were measured from retinal photographs. PAA was significantly correlated with CRVE (rho = 0.071, P = 0.003, but not CRAE (rho = 0.032, P = 0.182. Using admixture mapping, we did not detect significant admixture association with either CRAE (genome-wide score = -0.73 or CRVE (genome-wide score = -0.69. An a priori subgroup analysis among hypertensive individuals detected a genome-wide significant association of CRVE with greater African ancestry at chromosome 6p21.1 (genome-wide score = 2.31, locus-specific LOD = 5.47. Each additional copy of an African ancestral allele at the 6p21.1 peak was associated with an average increase in CRVE of 6.14 microm in the hypertensives, but had no significant effects in the non-hypertensives (P for heterogeneity <0.001. Further mapping in the 6p21.1 region may uncover novel genetic variants affecting retinal vascular caliber and further insights into the interaction between genetic effects of the microvascular system and hypertension.

  2. Admixture mapping scans identify a locus affecting retinal vascular caliber in hypertensive African Americans: the Atherosclerosis Risk in Communities (ARIC) study.

    Science.gov (United States)

    Cheng, Ching-Yu; Reich, David; Wong, Tien Y; Klein, Ronald; Klein, Barbara E K; Patterson, Nick; Tandon, Arti; Li, Man; Boerwinkle, Eric; Sharrett, A Richey; Kao, W H Linda

    2010-04-15

    Retinal vascular caliber provides information about the structure and health of the microvascular system and is associated with cardiovascular and cerebrovascular diseases. Compared to European Americans, African Americans tend to have wider retinal arteriolar and venular caliber, even after controlling for cardiovascular risk factors. This has suggested the hypothesis that differences in genetic background may contribute to racial/ethnic differences in retinal vascular caliber. Using 1,365 ancestry-informative SNPs, we estimated the percentage of African ancestry (PAA) and conducted genome-wide admixture mapping scans in 1,737 African Americans from the Atherosclerosis Risk in Communities (ARIC) study. Central retinal artery equivalent (CRAE) and central retinal vein equivalent (CRVE) representing summary measures of retinal arteriolar and venular caliber, respectively, were measured from retinal photographs. PAA was significantly correlated with CRVE (rho = 0.071, P = 0.003), but not CRAE (rho = 0.032, P = 0.182). Using admixture mapping, we did not detect significant admixture association with either CRAE (genome-wide score = -0.73) or CRVE (genome-wide score = -0.69). An a priori subgroup analysis among hypertensive individuals detected a genome-wide significant association of CRVE with greater African ancestry at chromosome 6p21.1 (genome-wide score = 2.31, locus-specific LOD = 5.47). Each additional copy of an African ancestral allele at the 6p21.1 peak was associated with an average increase in CRVE of 6.14 microm in the hypertensives, but had no significant effects in the non-hypertensives (P for heterogeneity retinal vascular caliber and further insights into the interaction between genetic effects of the microvascular system and hypertension.

  3. Admixture in Mexico City: implications for admixture mapping of type 2 diabetes genetic risk factors.

    Science.gov (United States)

    Martinez-Marignac, Veronica L; Valladares, Adan; Cameron, Emily; Chan, Andrea; Perera, Arjuna; Globus-Goldberg, Rachel; Wacher, Niels; Kumate, Jesús; McKeigue, Paul; O'Donnell, David; Shriver, Mark D; Cruz, Miguel; Parra, Esteban J

    2007-02-01

    Admixture mapping is a recently developed method for identifying genetic risk factors involved in complex traits or diseases showing prevalence differences between major continental groups. Type 2 diabetes (T2D) is at least twice as prevalent in Native American populations as in populations of European ancestry, so admixture mapping is well suited to study the genetic basis of this complex disease. We have characterized the admixture proportions in a sample of 286 unrelated T2D patients and 275 controls from Mexico City and we discuss the implications of the results for admixture mapping studies. Admixture proportions were estimated using 69 autosomal ancestry-informative markers (AIMs). Maternal and paternal contributions were estimated from geographically informative mtDNA and Y-specific polymorphisms. The average proportions of Native American, European and, West African admixture were estimated as 65, 30, and 5%, respectively. The contributions of Native American ancestors to maternal and paternal lineages were estimated as 90 and 40%, respectively. In a logistic model with higher educational status as dependent variable, the odds ratio for higher educational status associated with an increase from 0 to 1 in European admixture proportions was 9.4 (95%, credible interval 3.8-22.6). This association of socioeconomic status with individual admixture proportion shows that genetic stratification in this population is paralleled, and possibly maintained, by socioeconomic stratification. The effective number of generations back to unadmixed ancestors was 6.7 (95% CI 5.7-8.0), from which we can estimate that genome-wide admixture mapping will require typing about 1,400 evenly distributed AIMs to localize genes underlying disease risk between populations of European and Native American ancestry. Sample sizes of about 2,000 cases will be required to detect any locus that contributes an ancestry risk ratio of at least 1.5.

  4. Admixture mapping as a tool in gene discovery.

    Science.gov (United States)

    Seldin, Michael F

    2007-06-01

    Admixture mapping is a rapidly developing method to map susceptibility alleles in complex genetic disease associated with continental ancestry. Theoretically, when admixture between continental populations has occurred relatively recently, the chromosomal segments derived from the parental populations can be deduced from the differences in genotype allele frequencies. Progress in computational algorithms, in identification of ancestry informative single nucleotide polymorphisms, and in recent studies applying these tools suggests that this approach will complement other strategies for identifying the variation that underlies many complex diseases.

  5. High-resolution gene mapping using admixture linkage disequilibrium

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    This note reports simulation study on the rate of decay in linkage dis equilibrium (LD) in mixed populations over multiple discrete generations and explores the usefulness of the LD analysis in high-resolution gene mapping. The results indicate that the smaller the recombination fraction and the fewer generati ons since admixtureevent, the higher power of the approach in gene mapping. The expected estimate of recombination fraction would give an estimate that is slig htly biased upwards, if relevant genes are in tight linkage. The estimated recom bination fraction is usually larger than the true value within 2-5 generations. From generations 10-20, the mean estimates are in good agreement with the true value. The method presented here enables estimation of means and corresponding confidence intervals of the recombination fraction at any number of generations.

  6. Genome-wide scan of 29,141 African Americans finds no evidence of directional selection since admixture.

    Science.gov (United States)

    Bhatia, Gaurav; Tandon, Arti; Patterson, Nick; Aldrich, Melinda C; Ambrosone, Christine B; Amos, Christopher; Bandera, Elisa V; Berndt, Sonja I; Bernstein, Leslie; Blot, William J; Bock, Cathryn H; Caporaso, Neil; Casey, Graham; Deming, Sandra L; Diver, W Ryan; Gapstur, Susan M; Gillanders, Elizabeth M; Harris, Curtis C; Henderson, Brian E; Ingles, Sue A; Isaacs, William; De Jager, Phillip L; John, Esther M; Kittles, Rick A; Larkin, Emma; McNeill, Lorna H; Millikan, Robert C; Murphy, Adam; Neslund-Dudas, Christine; Nyante, Sarah; Press, Michael F; Rodriguez-Gil, Jorge L; Rybicki, Benjamin A; Schwartz, Ann G; Signorello, Lisa B; Spitz, Margaret; Strom, Sara S; Tucker, Margaret A; Wiencke, John K; Witte, John S; Wu, Xifeng; Yamamura, Yuko; Zanetti, Krista A; Zheng, Wei; Ziegler, Regina G; Chanock, Stephen J; Haiman, Christopher A; Reich, David; Price, Alkes L

    2014-10-01

    The extent of recent selection in admixed populations is currently an unresolved question. We scanned the genomes of 29,141 African Americans and failed to find any genome-wide-significant deviations in local ancestry, indicating no evidence of selection influencing ancestry after admixture. A recent analysis of data from 1,890 African Americans reported that there was evidence of selection in African Americans after their ancestors left Africa, both before and after admixture. Selection after admixture was reported on the basis of deviations in local ancestry, and selection before admixture was reported on the basis of allele-frequency differences between African Americans and African populations. The local-ancestry deviations reported by the previous study did not replicate in our very large sample, and we show that such deviations were expected purely by chance, given the number of hypotheses tested. We further show that the previous study's conclusion of selection in African Americans before admixture is also subject to doubt. This is because the FST statistics they used were inflated and because true signals of unusual allele-frequency differences between African Americans and African populations would be best explained by selection that occurred in Africa prior to migration to the Americas.

  7. Genome-wide Scan of 29,141 African Americans Finds No Evidence of Directional Selection since Admixture

    Science.gov (United States)

    Bhatia, Gaurav; Tandon, Arti; Patterson, Nick; Aldrich, Melinda C.; Ambrosone, Christine B.; Amos, Christopher; Bandera, Elisa V.; Berndt, Sonja I.; Bernstein, Leslie; Blot, William J.; Bock, Cathryn H.; Caporaso, Neil; Casey, Graham; Deming, Sandra L.; Diver, W. Ryan; Gapstur, Susan M.; Gillanders, Elizabeth M.; Harris, Curtis C.; Henderson, Brian E.; Ingles, Sue A.; Isaacs, William; De Jager, Phillip L.; John, Esther M.; Kittles, Rick A.; Larkin, Emma; McNeill, Lorna H.; Millikan, Robert C.; Murphy, Adam; Neslund-Dudas, Christine; Nyante, Sarah; Press, Michael F.; Rodriguez-Gil, Jorge L.; Rybicki, Benjamin A.; Schwartz, Ann G.; Signorello, Lisa B.; Spitz, Margaret; Strom, Sara S.; Tucker, Margaret A.; Wiencke, John K.; Witte, John S.; Wu, Xifeng; Yamamura, Yuko; Zanetti, Krista A.; Zheng, Wei; Ziegler, Regina G.; Chanock, Stephen J.; Haiman, Christopher A.; Reich, David; Price, Alkes L.

    2014-01-01

    The extent of recent selection in admixed populations is currently an unresolved question. We scanned the genomes of 29,141 African Americans and failed to find any genome-wide-significant deviations in local ancestry, indicating no evidence of selection influencing ancestry after admixture. A recent analysis of data from 1,890 African Americans reported that there was evidence of selection in African Americans after their ancestors left Africa, both before and after admixture. Selection after admixture was reported on the basis of deviations in local ancestry, and selection before admixture was reported on the basis of allele-frequency differences between African Americans and African populations. The local-ancestry deviations reported by the previous study did not replicate in our very large sample, and we show that such deviations were expected purely by chance, given the number of hypotheses tested. We further show that the previous study’s conclusion of selection in African Americans before admixture is also subject to doubt. This is because the FST statistics they used were inflated and because true signals of unusual allele-frequency differences between African Americans and African populations would be best explained by selection that occurred in Africa prior to migration to the Americas. PMID:25242497

  8. Admixture mapping of end stage kidney disease genetic susceptibility using estimated mutual information ancestry informative markers

    Directory of Open Access Journals (Sweden)

    Geiger Dan

    2010-10-01

    Full Text Available Abstract Background The question of a genetic contribution to the higher prevalence and incidence of end stage kidney disease (ESKD among African Americans (AA remained unresolved, until recent findings using admixture mapping pointed to the association of a genomic locus on chromosome 22 with this disease phenotype. In the current study we utilize this example to demonstrate the utility of applying a multi-step admixture mapping approach. Methods A multi-step case only admixture mapping study, consisted of the following steps was designed: 1 Assembly of the sample dataset (ESKD AA; 2 Design of the estimated mutual information ancestry informative markers (n = 2016 screening panel 3; Genotyping the sample set whose size was determined by a power analysis (n = 576 appropriate for the initial screening panel; 4 Inference of local ancestry for each individual and identification of regions with increased AA ancestry using two different ancestry inference statistical approaches; 5 Enrichment of the initial screening panel; 6 Power analysis of the enriched panel 7 Genotyping of additional samples. 8 Re-analysis of the genotyping results to identify a genetic risk locus. Results The initial screening phase yielded a significant peak using the ADMIXMAP ancestry inference program applying case only statistics. Subgroup analysis of 299 ESKD patients with no history of diabetes yielded peaks using both the ANCESTRYMAP and ADMIXMAP ancestry inference programs. The significant peak was found on chromosome 22. Genotyping of additional ancestry informative markers on chromosome 22 that took into account linkage disequilibrium in the ancestral populations, and the addition of samples increased the statistical significance of the finding. Conclusions A multi-step admixture mapping analysis of AA ESKD patients replicated the finding of a candidate risk locus on chromosome 22, contributing to the heightened susceptibility of African Americans to develop non

  9. Rate of decay in admixture linkage disequilibrium and its implication in gene mapping

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    Modeling linkage disequilibria (LD) between genes usually observed in admixed natural populations has been shown an effective approach in high-resolution mapping of disease genes in humans. A prerequisite to obtain accurate estimation of recombination fraction between genes at a marker locus and the disease locus using the approach is a reliable prediction of the proportion of the admixture populations. The present study suggested the use of gene frequencies to predict the estimate of the admixture propor-tion based on the observation that the gene frequencies are much more stable quantities than the haplotype frequencies over evolution of the population. In this paper, we advanced the theory and methods by which the decay rate of nonlinear term of LD in admixed population may be used to estimate the recombination fraction between the genes. Theoretical analysis and simulation study indicate that, the larger the difference of gene frequencies between parental populations and the more closely the admixture proportion approaches 0.5, the more important the nonlinear term of the LD in the admixed population, and hence the more informative such admixed populations in the high-resolution gene mapping practice.

  10. Comparison of measures of marker informativeness for ancestry and admixture mapping

    Directory of Open Access Journals (Sweden)

    Ding Lili

    2011-12-01

    Full Text Available Abstract Background Admixture mapping is a powerful gene mapping approach for an admixed population formed from ancestral populations with different allele frequencies. The power of this method relies on the ability of ancestry informative markers (AIMs to infer ancestry along the chromosomes of admixed individuals. In this study, more than one million SNPs from HapMap databases and simulated data have been interrogated in admixed populations using various measures of ancestry informativeness: Fisher Information Content (FIC, Shannon Information Content (SIC, F statistics (FST, Informativeness for Assignment Measure (In, and the Absolute Allele Frequency Differences (delta, δ. The objectives are to compare these measures of informativeness to select SNP markers for ancestry inference, and to determine the accuracy of AIM panels selected by each measure in estimating the contributions of the ancestors to the admixed population. Results FST and In had the highest Spearman correlation and the best agreement as measured by Kappa statistics based on deciles. Although the different measures of marker informativeness performed comparably well, analyses based on the top 1 to 10% ranked informative markers of simulated data showed that In was better in estimating ancestry for an admixed population. Conclusions Although millions of SNPs have been identified, only a small subset needs to be genotyped in order to accurately predict ancestry with a minimal error rate in a cost-effective manner. In this article, we compared various methods for selecting ancestry informative SNPs using simulations as well as SNP genotype data from samples of admixed populations and showed that the In measure estimates ancestry proportion (in an admixed population with lower bias and mean square error.

  11. Admixture mapping of 15,280 African Americans identifies obesity susceptibility loci on chromosomes 5 and X.

    Directory of Open Access Journals (Sweden)

    Ching-Yu Cheng

    2009-05-01

    Full Text Available The prevalence of obesity (body mass index (BMI > or =30 kg/m(2 is higher in African Americans than in European Americans, even after adjustment for socioeconomic factors, suggesting that genetic factors may explain some of the difference. To identify genetic loci influencing BMI, we carried out a pooled analysis of genome-wide admixture mapping scans in 15,280 African Americans from 14 epidemiologic studies. Samples were genotyped at a median of 1,411 ancestry-informative markers. After adjusting for age, sex, and study, BMI was analyzed both as a dichotomized (top 20% versus bottom 20% and a continuous trait. We found that a higher percentage of European ancestry was significantly correlated with lower BMI (rho = -0.042, P = 1.6x10(-7. In the dichotomized analysis, we detected two loci on chromosome X as associated with increased African ancestry: the first at Xq25 (locus-specific LOD = 5.94; genome-wide score = 3.22; case-control Z = -3.94; and the second at Xq13.1 (locus-specific LOD = 2.22; case-control Z = -4.62. Quantitative analysis identified a third locus at 5q13.3 where higher BMI was highly significantly associated with greater European ancestry (locus-specific LOD = 6.27; genome-wide score = 3.46. Further mapping studies with dense sets of markers will be necessary to identify the alleles in these regions of chromosomes X and 5 that may be associated with variation in BMI.

  12. Admixture mapping of 15,280 African Americans identifies obesity susceptibility loci on chromosomes 5 and X.

    Science.gov (United States)

    Cheng, Ching-Yu; Kao, W H Linda; Patterson, Nick; Tandon, Arti; Haiman, Christopher A; Harris, Tamara B; Xing, Chao; John, Esther M; Ambrosone, Christine B; Brancati, Frederick L; Coresh, Josef; Press, Michael F; Parekh, Rulan S; Klag, Michael J; Meoni, Lucy A; Hsueh, Wen-Chi; Fejerman, Laura; Pawlikowska, Ludmila; Freedman, Matthew L; Jandorf, Lina H; Bandera, Elisa V; Ciupak, Gregory L; Nalls, Michael A; Akylbekova, Ermeg L; Orwoll, Eric S; Leak, Tennille S; Miljkovic, Iva; Li, Rongling; Ursin, Giske; Bernstein, Leslie; Ardlie, Kristin; Taylor, Herman A; Boerwinckle, Eric; Zmuda, Joseph M; Henderson, Brian E; Wilson, James G; Reich, David

    2009-05-01

    The prevalence of obesity (body mass index (BMI) > or =30 kg/m(2)) is higher in African Americans than in European Americans, even after adjustment for socioeconomic factors, suggesting that genetic factors may explain some of the difference. To identify genetic loci influencing BMI, we carried out a pooled analysis of genome-wide admixture mapping scans in 15,280 African Americans from 14 epidemiologic studies. Samples were genotyped at a median of 1,411 ancestry-informative markers. After adjusting for age, sex, and study, BMI was analyzed both as a dichotomized (top 20% versus bottom 20%) and a continuous trait. We found that a higher percentage of European ancestry was significantly correlated with lower BMI (rho = -0.042, P = 1.6x10(-7)). In the dichotomized analysis, we detected two loci on chromosome X as associated with increased African ancestry: the first at Xq25 (locus-specific LOD = 5.94; genome-wide score = 3.22; case-control Z = -3.94); and the second at Xq13.1 (locus-specific LOD = 2.22; case-control Z = -4.62). Quantitative analysis identified a third locus at 5q13.3 where higher BMI was highly significantly associated with greater European ancestry (locus-specific LOD = 6.27; genome-wide score = 3.46). Further mapping studies with dense sets of markers will be necessary to identify the alleles in these regions of chromosomes X and 5 that may be associated with variation in BMI.

  13. Scanned Hardcopy Maps, Scanned maps...not a layer, Published in Not Provided, Norton County Appraisal Office.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, was produced all or in part from Hardcopy Maps information as of Not Provided. It is described as 'Scanned maps...not a layer'....

  14. Conductivity map from scanning tunneling potentiometry.

    Science.gov (United States)

    Zhang, Hao; Li, Xianqi; Chen, Yunmei; Durand, Corentin; Li, An-Ping; Zhang, X-G

    2016-08-01

    We present a novel method for extracting two-dimensional (2D) conductivity profiles from large electrochemical potential datasets acquired by scanning tunneling potentiometry of a 2D conductor. The method consists of a data preprocessing procedure to reduce/eliminate noise and a numerical conductivity reconstruction. The preprocessing procedure employs an inverse consistent image registration method to align the forward and backward scans of the same line for each image line followed by a total variation (TV) based image restoration method to obtain a (nearly) noise-free potential from the aligned scans. The preprocessed potential is then used for numerical conductivity reconstruction, based on a TV model solved by accelerated alternating direction method of multiplier. The method is demonstrated on a measurement of the grain boundary of a monolayer graphene, yielding a nearly 10:1 ratio for the grain boundary resistivity over bulk resistivity.

  15. Conductivity map from scanning tunneling potentiometry

    Science.gov (United States)

    Zhang, Hao; Li, Xianqi; Chen, Yunmei; Durand, Corentin; Li, An-Ping; Zhang, X.-G.

    2016-08-01

    We present a novel method for extracting two-dimensional (2D) conductivity profiles from large electrochemical potential datasets acquired by scanning tunneling potentiometry of a 2D conductor. The method consists of a data preprocessing procedure to reduce/eliminate noise and a numerical conductivity reconstruction. The preprocessing procedure employs an inverse consistent image registration method to align the forward and backward scans of the same line for each image line followed by a total variation (TV) based image restoration method to obtain a (nearly) noise-free potential from the aligned scans. The preprocessed potential is then used for numerical conductivity reconstruction, based on a TV model solved by accelerated alternating direction method of multiplier. The method is demonstrated on a measurement of the grain boundary of a monolayer graphene, yielding a nearly 10:1 ratio for the grain boundary resistivity over bulk resistivity.

  16. Applications of orientation mapping by scanning and transmission electron microscopy

    DEFF Research Database (Denmark)

    Juul Jensen, D.

    1997-01-01

    The potentials of orientation mapping techniques (in the following referred to as OIM) for studies of thermomechanical processes are analysed. Both transmission electron microscopy (TEM) and scanning electron microscopy (SEM) based OIM techniques are considered. Among the thermomechanical processes...

  17. A genome-wide admixture scan identifies MYH9 as a candidate locus associated with non-diabetic end stage renal disease in African Americans

    Science.gov (United States)

    Linda Kao, WH; Klag, Michael J; Meoni, Lucy A; Reich, David; Berthier-Schaad, Yvette; Li, Man; Coresh, Josef; Patterson, Nick; Tandon, Arti; Powe, Neil R; Fink, Nancy E; Sadler, John H; Weir, Matthew R; Abboud, Hanna E; Adler, Sharon; Divers, Jasmin; Iyengar, Sudha K; Freedman, Barry I; Kimmel, Paul L; Knowler, William C; Kohn, Orly F; Kramp, Kristopher; Leehey, David J; Nicholas, Susanne; Pahl, Madeleine; Schelling, Jeffrey R; Sedor, John R; Thornley-Brown, Denyse; Winkler, Cheryl A; Smith, Michael W.; Parekh, Rulan S.

    2008-01-01

    End stage renal disease (ESRD) has a four times higher incidence in African Americans compared to European Americans. This led to the hypothesis that susceptibility alleles for ESRD have a higher frequency in West African than European gene pool. We performed a genome-wide admixture scan in 1,372 ESRD cases and 806 controls and demonstrated a highly significant association between excess African ancestry and non-diabetic ESRD (LOD 5.70) but not diabetic ESRD (LOD 0.47) on chromosome 22q12. Each copy of the European ancestral allele conferred a relative risk of 0.50 (95% credible interval 0.39 – 0.63) compared to African ancestry. Multiple common SNPs (allele frequency ranging from 0.2 to 0.6) in the gene that encodes non-muscle myosin heavy chain type II isoform A (MYH9) were associated with 2-4 times greater risk of non-diabetic ESRD and accounted for a large proportion of the excess risk of ESRD observed in African compared to European Americans. PMID:18794854

  18. TOPOLOGICAL STRUCTURING OF RASTER-SCANNED LINE MAP DATA.

    Science.gov (United States)

    Fegeas, Robin G.; Pearsall, Richard A.

    1984-01-01

    The U. S. Geological Survey has a requirement for the collection of large amounts of digital map data from existing graphic map separates. Prototype production techniques have been developed to capture line data from the map separates using a raster-scanning input device. After minimal editing in raster form, the data are converted to 'unstructured' vector form. In order to be processed further, the line data must be topologically structured (nodes identified and start-node, end-node, area-left, and area-right tags associated with each line-segment chain). This paper describes the techniques which have been developed at the U. S. Geological Survey to topologically structure the raster-scanned line map data.

  19. Temperature mapping of operating nanoscale devices by scanning probe thermometry

    Science.gov (United States)

    Menges, Fabian; Mensch, Philipp; Schmid, Heinz; Riel, Heike; Stemmer, Andreas; Gotsmann, Bernd

    2016-03-01

    Imaging temperature fields at the nanoscale is a central challenge in various areas of science and technology. Nanoscopic hotspots, such as those observed in integrated circuits or plasmonic nanostructures, can be used to modify the local properties of matter, govern physical processes, activate chemical reactions and trigger biological mechanisms in living organisms. The development of high-resolution thermometry techniques is essential for understanding local thermal non-equilibrium processes during the operation of numerous nanoscale devices. Here we present a technique to map temperature fields using a scanning thermal microscope. Our method permits the elimination of tip-sample contact-related artefacts, a major hurdle that so far has limited the use of scanning probe microscopy for nanoscale thermometry. We map local Peltier effects at the metal-semiconductor contacts to an indium arsenide nanowire and self-heating of a metal interconnect with 7 mK and sub-10 nm spatial temperature resolution.

  20. Uniform color processing of scanned topographic maps based on SSR

    Science.gov (United States)

    Fu, Zhongliang; Tong, Chunya; Liu, Lu; Huang, Yan

    2009-10-01

    Nowadays, large amount of paper-based topographic maps are still existed in many government department. The scanned maps of them are very useful for research on city history migration, city planning and so on. However, the brightness of these maps is not uniform, and creases are existed, so uniform color process is always needed. If the classical Retinex algorithm is used, the map would have a low brightness and contrast ratio. Therefore, a normal intercepting SSR algorithm of linear extending is presented in this paper. This algorithm first uses the classical SSR algorithm to process the data, and then the average value of image and variance are introduced to do normal intercepting linear extending on the map. Experiment results show that, the improved SSR can not only efficiently eliminate creases and uniform the map brightness, but also increase the global brightness and contrast ratio. Moreover, this algorithm can also be used in the pretreatment of grid image registration, thus to enhance the precision, velocity and accuracy of registration.

  1. HapMap scanning of novel human minor histocompatibility antigens.

    Science.gov (United States)

    Kamei, Michi; Nannya, Yasuhito; Torikai, Hiroki; Kawase, Takakazu; Taura, Kenjiro; Inamoto, Yoshihiro; Takahashi, Taro; Yazaki, Makoto; Morishima, Satoko; Tsujimura, Kunio; Miyamura, Koichi; Ito, Tetsuya; Togari, Hajime; Riddell, Stanley R; Kodera, Yoshihisa; Morishima, Yasuo; Takahashi, Toshitada; Kuzushima, Kiyotaka; Ogawa, Seishi; Akatsuka, Yoshiki

    2009-05-21

    Minor histocompatibility antigens (mHags) are molecular targets of allo-immunity associated with hematopoietic stem cell transplantation (HSCT) and involved in graft-versus-host disease, but they also have beneficial antitumor activity. mHags are typically defined by host SNPs that are not shared by the donor and are immunologically recognized by cytotoxic T cells isolated from post-HSCT patients. However, the number of molecularly identified mHags is still too small to allow prospective studies of their clinical importance in transplantation medicine, mostly due to the lack of an efficient method for isolation. Here we show that when combined with conventional immunologic assays, the large data set from the International HapMap Project can be directly used for genetic mapping of novel mHags. Based on the immunologically determined mHag status in HapMap panels, a target mHag locus can be uniquely mapped through whole genome association scanning taking advantage of the unprecedented resolution and power obtained with more than 3 000 000 markers. The feasibility of our approach could be supported by extensive simulations and further confirmed by actually isolating 2 novel mHags as well as 1 previously identified example. The HapMap data set represents an invaluable resource for investigating human variation, with obvious applications in genetic mapping of clinically relevant human traits.

  2. High-Resolution Underwater Mapping Using Side-Scan Sonar.

    Science.gov (United States)

    Burguera, Antoni; Oliver, Gabriel

    2016-01-01

    The goal of this study is to generate high-resolution sea floor maps using a Side-Scan Sonar(SSS). This is achieved by explicitly taking into account the SSS operation as follows. First, the raw sensor data is corrected by means of a physics-based SSS model. Second, the data is projected to the sea-floor. The errors involved in this projection are thoroughfully analysed. Third, a probabilistic SSS model is defined and used to estimate the probability of each sea-floor region to be observed. This probabilistic information is then used to weight the contribution of each SSS measurement to the map. Because of these models, arbitrary map resolutions can be achieved, even beyond the sensor resolution. Finally, a geometric map building method is presented and combined with the probabilistic approach. The resulting map is composed of two layers. The echo intensity layer holds the most likely echo intensities at each point in the sea-floor. The probabilistic layer contains information about how confident can the user or the higher control layers be about the echo intensity layer data. Experimental results have been conducted in a large subsea region.

  3. High-Resolution Underwater Mapping Using Side-Scan Sonar.

    Directory of Open Access Journals (Sweden)

    Antoni Burguera

    Full Text Available The goal of this study is to generate high-resolution sea floor maps using a Side-Scan Sonar(SSS. This is achieved by explicitly taking into account the SSS operation as follows. First, the raw sensor data is corrected by means of a physics-based SSS model. Second, the data is projected to the sea-floor. The errors involved in this projection are thoroughfully analysed. Third, a probabilistic SSS model is defined and used to estimate the probability of each sea-floor region to be observed. This probabilistic information is then used to weight the contribution of each SSS measurement to the map. Because of these models, arbitrary map resolutions can be achieved, even beyond the sensor resolution. Finally, a geometric map building method is presented and combined with the probabilistic approach. The resulting map is composed of two layers. The echo intensity layer holds the most likely echo intensities at each point in the sea-floor. The probabilistic layer contains information about how confident can the user or the higher control layers be about the echo intensity layer data. Experimental results have been conducted in a large subsea region.

  4. Sonar scan matching for simultaneous localization and mapping in confined underwater environments

    OpenAIRE

    Mallios, Angelos

    2014-01-01

    This thesis presents the development of a localization and mapping algorithm for an autonomous underwater vehicle (AUV). It is based on probabilistic scan matching of raw sonar scans within a pose-based simultaneous localization and mapping(SLAM) framework

  5. Multispectral Airborne Laser Scanning for Automated Map Updating

    Science.gov (United States)

    Matikainen, Leena; Hyyppä, Juha; Litkey, Paula

    2016-06-01

    During the last 20 years, airborne laser scanning (ALS), often combined with multispectral information from aerial images, has shown its high feasibility for automated mapping processes. Recently, the first multispectral airborne laser scanners have been launched, and multispectral information is for the first time directly available for 3D ALS point clouds. This article discusses the potential of this new single-sensor technology in map updating, especially in automated object detection and change detection. For our study, Optech Titan multispectral ALS data over a suburban area in Finland were acquired. Results from a random forests analysis suggest that the multispectral intensity information is useful for land cover classification, also when considering ground surface objects and classes, such as roads. An out-of-bag estimate for classification error was about 3% for separating classes asphalt, gravel, rocky areas and low vegetation from each other. For buildings and trees, it was under 1%. According to feature importance analyses, multispectral features based on several channels were more useful that those based on one channel. Automatic change detection utilizing the new multispectral ALS data, an old digital surface model (DSM) and old building vectors was also demonstrated. Overall, our first analyses suggest that the new data are very promising for further increasing the automation level in mapping. The multispectral ALS technology is independent of external illumination conditions, and intensity images produced from the data do not include shadows. These are significant advantages when the development of automated classification and change detection procedures is considered.

  6. Scanned Hardcopy Maps, Walworth County Historical Airphotos scanned and georeferenced, Published in 2011, Not Applicable scale, Walworth County.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, published at Not Applicable scale, was produced all or in part from Other information as of 2011. It is described as 'Walworth...

  7. Scanned Hardcopy Maps, legato data base; public works, Published in 2006, Washoe County.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, was produced all or in part from Hardcopy Maps information as of 2006. It is described as 'legato data base; public works'. Data...

  8. Scanning Transmission X-Ray, Laser Scanning, and Transmission Electron Microscopy Mapping of the Exopolymeric Matrix of Microbial Biofilms

    OpenAIRE

    Lawrence, J. R.; Swerhone, G. D. W.; Leppard, G. G.; T. Araki; Zhang, X.; West, M. M.; A. P. Hitchcock

    2003-01-01

    Confocal laser scanning microscopy (CLSM), transmission electron microscopy (TEM), and soft X-ray scanning transmission X-ray microscopy (STXM) were used to map the distribution of macromolecular subcomponents (e.g., polysaccharides, proteins, lipids, and nucleic acids) of biofilm cells and matrix. The biofilms were developed from river water supplemented with methanol, and although they comprised a complex microbial community, the biofilms were dominated by heterotrophic bacteria. TEM provid...

  9. Ground mapping resolution accuracy of a scanning radiometer from a geostationary satellite.

    Science.gov (United States)

    Stremler, F G; Khalil, M A; Parent, R J

    1977-06-01

    Measures of the spatial and spatial rate (frequency) mapping of scanned visual imagery from an earth reference system to a spin-scan geostationary satellite are examined. Mapping distortions and coordinate inversions to correct for these distortions are formulated in terms of geometric transformations between earth and satellite frames of reference. Probabilistic methods are used to develop relations for obtainable mapping resolution when coordinate inversions are employed.

  10. Principal components analysis of population admixture.

    Directory of Open Access Journals (Sweden)

    Jianzhong Ma

    Full Text Available With the availability of high-density genotype information, principal components analysis (PCA is now routinely used to detect and quantify the genetic structure of populations in both population genetics and genetic epidemiology. An important issue is how to make appropriate and correct inferences about population relationships from the results of PCA, especially when admixed individuals are included in the analysis. We extend our recently developed theoretical formulation of PCA to allow for admixed populations. Because the sampled individuals are treated as features, our generalized formulation of PCA directly relates the pattern of the scatter plot of the top eigenvectors to the admixture proportions and parameters reflecting the population relationships, and thus can provide valuable guidance on how to properly interpret the results of PCA in practice. Using our formulation, we theoretically justify the diagnostic of two-way admixture. More importantly, our theoretical investigations based on the proposed formulation yield a diagnostic of multi-way admixture. For instance, we found that admixed individuals with three parental populations are distributed inside the triangle formed by their parental populations and divide the triangle into three smaller triangles whose areas have the same proportions in the big triangle as the corresponding admixture proportions. We tested and illustrated these findings using simulated data and data from HapMap III and the Human Genome Diversity Project.

  11. Scanned Hardcopy Maps, Published in 2010, Athens-Clarke County Planning Department.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, was produced all or in part from Field Survey/GPS information as of 2010. Data by this publisher are often provided in State...

  12. Scanned Hardcopy Maps, Plat of Survey maps filed in the Manitowoc County Real Propery Lister's Office., Published in unknown, Manitowoc County.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, was produced all or in part from Hardcopy Maps information as of unknown. It is described as 'Plat of Survey maps filed in the...

  13. Mapping molecules in scanning far-field fluorescence nanoscopy

    Science.gov (United States)

    Ta, Haisen; Keller, Jan; Haltmeier, Markus; Saka, Sinem K.; Schmied, Jürgen; Opazo, Felipe; Tinnefeld, Philip; Munk, Axel; Hell, Stefan W.

    2015-08-01

    In fluorescence microscopy, the distribution of the emitting molecule number in space is usually obtained by dividing the measured fluorescence by that of a single emitter. However, the brightness of individual emitters may vary strongly in the sample or be inaccessible. Moreover, with increasing (super-) resolution, fewer molecules are found per pixel, making this approach unreliable. Here we map the distribution of molecules by exploiting the fact that a single molecule emits only a single photon at a time. Thus, by analysing the simultaneous arrival of multiple photons during confocal imaging, we can establish the number and local brightness of typically up to 20 molecules per confocal (diffraction sized) recording volume. Subsequent recording by stimulated emission depletion microscopy provides the distribution of the number of molecules with subdiffraction resolution. The method is applied to mapping the three-dimensional nanoscale organization of internalized transferrin receptors on human HEK293 cells.

  14. Analysis of Ethnic Admixture in Prostate Cancer

    Science.gov (United States)

    2007-12-01

    5a. CONTRACT NUMBER 5b. GRANT NUMBER W81XWH-06-1-0181 5c. PROGRAM ELEMENT NUMBER 6. AUTHOR(S) Cathryn Bock, Ph.D. 5d. PROJECT NUMBER...Our project uses a novel approach to gene discovery with greater power to detect genetic effects, admixture mapping, to identify prostate cancer...available through HapMap . Because ParAllele was out of business when we were ready to genotype, we used a panel of 1536 ancestry informative SNPs

  15. Automated matching of multiple terrestrial laser scans for stem mapping without the use of artificial references

    Science.gov (United States)

    Liu, Jingbin; Liang, Xinlian; Hyyppä, Juha; Yu, Xiaowei; Lehtomäki, Matti; Pyörälä, Jiri; Zhu, Lingli; Wang, Yunsheng; Chen, Ruizhi

    2017-04-01

    Terrestrial laser scanning has been widely used to analyze the 3D structure of a forest in detail and to generate data at the level of a reference plot for forest inventories without destructive measurements. Multi-scan terrestrial laser scanning is more commonly applied to collect plot-level data so that all of the stems can be detected and analyzed. However, it is necessary to match the point clouds of multiple scans to yield a point cloud with automated processing. Mismatches between datasets will lead to errors during the processing of multi-scan data. Classic registration methods based on flat surfaces cannot be directly applied in forest environments; therefore, artificial reference objects have conventionally been used to assist with scan matching. The use of artificial references requires additional labor and expertise, as well as greatly increasing the cost. In this study, we present an automated processing method for plot-level stem mapping that matches multiple scans without artificial references. In contrast to previous studies, the registration method developed in this study exploits the natural geometric characteristics among a set of tree stems in a plot and combines the point clouds of multiple scans into a unified coordinate system. Integrating multiple scans improves the overall performance of stem mapping in terms of the correctness of tree detection, as well as the bias and the root-mean-square errors of forest attributes such as diameter at breast height and tree height. In addition, the automated processing method makes stem mapping more reliable and consistent among plots, reduces the costs associated with plot-based stem mapping, and enhances the efficiency.

  16. Dating the age of admixture via wavelet transform analysis of genome-wide data

    NARCIS (Netherlands)

    I. Pugach (Irina); R. Matveyev (Rostislav); A. Wollstein (Andreas); M.H. Kayser (Manfred); M. Stoneking (Mark)

    2011-01-01

    textabstractWe describe a PCA-based genome scan approach to analyze genome-wide admixture structure, and introduce wavelet transform analysis as a method for estimating the time of admixture. We test the wavelet transform method with simulations and apply it to genome-wide SNP data from eight admixe

  17. Geographic patterns of genome admixture in Latin American Mestizos.

    Directory of Open Access Journals (Sweden)

    Sijia Wang

    2008-03-01

    Full Text Available The large and diverse population of Latin America is potentially a powerful resource for elucidating the genetic basis of complex traits through admixture mapping. However, no genome-wide characterization of admixture across Latin America has yet been attempted. Here, we report an analysis of admixture in thirteen Mestizo populations (i.e. in regions of mainly European and Native settlement from seven countries in Latin America based on data for 678 autosomal and 29 X-chromosome microsatellites. We found extensive variation in Native American and European ancestry (and generally low levels of African ancestry among populations and individuals, and evidence that admixture across Latin America has often involved predominantly European men and both Native and African women. An admixture analysis allowing for Native American population subdivision revealed a differentiation of the Native American ancestry amongst Mestizos. This observation is consistent with the genetic structure of pre-Columbian populations and with admixture having involved Natives from the area where the Mestizo examined are located. Our findings agree with available information on the demographic history of Latin America and have a number of implications for the design of association studies in population from the region.

  18. Geographic Patterns of Genome Admixture in Latin American Mestizos

    Science.gov (United States)

    Wang, Sijia; Ray, Nicolas; Rojas, Winston; Parra, Maria V.; Bedoya, Gabriel; Gallo, Carla; Poletti, Giovanni; Hill, Kim; Hurtado, Ana M.; Camrena, Beatriz; Nicolini, Humberto; Klitz, William; Barrantes, Ramiro; Molina, Julio A.; Freimer, Nelson B.; Bortolini, Maria Cátira; Salzano, Francisco M.; Petzl-Erler, Maria L.; Tsuneto, Luiza T.; Dipierri, José E.; Alfaro, Emma L.; Bailliet, Graciela; Bianchi, Nestor O.; Llop, Elena; Rothhammer, Francisco; Excoffier, Laurent; Ruiz-Linares, Andrés

    2008-01-01

    The large and diverse population of Latin America is potentially a powerful resource for elucidating the genetic basis of complex traits through admixture mapping. However, no genome-wide characterization of admixture across Latin America has yet been attempted. Here, we report an analysis of admixture in thirteen Mestizo populations (i.e. in regions of mainly European and Native settlement) from seven countries in Latin America based on data for 678 autosomal and 29 X-chromosome microsatellites. We found extensive variation in Native American and European ancestry (and generally low levels of African ancestry) among populations and individuals, and evidence that admixture across Latin America has often involved predominantly European men and both Native and African women. An admixture analysis allowing for Native American population subdivision revealed a differentiation of the Native American ancestry amongst Mestizos. This observation is consistent with the genetic structure of pre-Columbian populations and with admixture having involved Natives from the area where the Mestizo examined are located. Our findings agree with available information on the demographic history of Latin America and have a number of implications for the design of association studies in population from the region. PMID:18369456

  19. Geographic patterns of genome admixture in Latin American Mestizos.

    Science.gov (United States)

    Wang, Sijia; Ray, Nicolas; Rojas, Winston; Parra, Maria V; Bedoya, Gabriel; Gallo, Carla; Poletti, Giovanni; Mazzotti, Guido; Hill, Kim; Hurtado, Ana M; Camrena, Beatriz; Nicolini, Humberto; Klitz, William; Barrantes, Ramiro; Molina, Julio A; Freimer, Nelson B; Bortolini, Maria Cátira; Salzano, Francisco M; Petzl-Erler, Maria L; Tsuneto, Luiza T; Dipierri, José E; Alfaro, Emma L; Bailliet, Graciela; Bianchi, Nestor O; Llop, Elena; Rothhammer, Francisco; Excoffier, Laurent; Ruiz-Linares, Andrés

    2008-03-21

    The large and diverse population of Latin America is potentially a powerful resource for elucidating the genetic basis of complex traits through admixture mapping. However, no genome-wide characterization of admixture across Latin America has yet been attempted. Here, we report an analysis of admixture in thirteen Mestizo populations (i.e. in regions of mainly European and Native settlement) from seven countries in Latin America based on data for 678 autosomal and 29 X-chromosome microsatellites. We found extensive variation in Native American and European ancestry (and generally low levels of African ancestry) among populations and individuals, and evidence that admixture across Latin America has often involved predominantly European men and both Native and African women. An admixture analysis allowing for Native American population subdivision revealed a differentiation of the Native American ancestry amongst Mestizos. This observation is consistent with the genetic structure of pre-Columbian populations and with admixture having involved Natives from the area where the Mestizo examined are located. Our findings agree with available information on the demographic history of Latin America and have a number of implications for the design of association studies in population from the region.

  20. Scanned Hardcopy Maps, Flood Insurance Rate Maps, countywide, Published in 2008, 1:2400 (1in=200ft) scale, Dickinson County.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, published at 1:2400 (1in=200ft) scale, was produced all or in part from Hardcopy Maps information as of 2008. It is described as...

  1. Scanned Hardcopy Maps, All Engineering hanging files: sewer, water, construction plans, and subdivisions, Published in 2008, City of Hutchinson.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, was produced all or in part from Hardcopy Maps information as of 2008. It is described as 'All Engineering hanging files: sewer,...

  2. Generating an optimal DTM from airborne laser scanning data for landslide mapping in a tropical forest environment

    NARCIS (Netherlands)

    Razak, Khamarrul Azahari; Santangelo, Michele; Westen, van Cees J.; Straatsma, Menno W.; Jong, de Steven M.

    2013-01-01

    Landslide inventory maps are fundamental for assessing landslide susceptibility, hazard, and risk. In tropical mountainous environments, mapping landslides is difficult as rapid and dense vegetation growth obscures landslides soon after their occurrence. Airborne laser scanning (ALS) data have been

  3. Full-information Maximum Likelihood Estimation of Brand Positioning Maps Using Supermarkt Scanning Data

    NARCIS (Netherlands)

    E. Waarts (Eric); M.A. Carree (Martin); B. Wierenga (Berend)

    1991-01-01

    textabstractThe authors build on the idea put forward by Shugan to infer product maps from scanning data. They demonstrate that the actual estimation procedure used by Shugan has several methodological problems and may yield unstable estimates. They propose an alternative estimation procedure, full-

  4. Direct mapping of local redox current density on a monolith electrode by laser scanning.

    Science.gov (United States)

    Lee, Seung-Woo; Lopez, Jeffrey; Saraf, Ravi F

    2013-09-15

    An optical method of mapping local redox reaction over a monolith electrode using simple laser scanning is described. As the optical signal is linearly proportional to the maximum redox current that is measured concomitantly by voltammetry, the optical signal quantitatively maps the local redox current density distribution. The method is demonstrated on two types of reactions: (1) a reversible reaction where the redox moieties are ionic, and (2) an irreversible reaction on two different types of enzymes immobilized on the electrode where the reaction moieties are nonionic. To demonstrate the scanning capability, the local redox behavior on a "V-shaped" electrode is studied where the local length scale and, hence, the local current density, is nonuniform. The ability to measure the current density distribution by this method will pave the way for multianalyte analysis on a monolith electrode using a standard three-electrode configuration. The method is called Scanning Electrometer for Electrical Double-layer (SEED).

  5. Mapping metals in Parkinson's and normal brain using rapid-scanning x-ray fluorescence

    Science.gov (United States)

    Popescu, Bogdan F. Gh; George, Martin J.; Bergmann, Uwe; Garachtchenko, Alex V.; Kelly, Michael E.; McCrea, Richard P. E.; Lüning, Katharina; Devon, Richard M.; George, Graham N.; Hanson, Akela D.; Harder, Sheri M.; Chapman, L. Dean; Pickering, Ingrid J.; Nichol, Helen

    2009-02-01

    Rapid-scanning x-ray fluorescence (RS-XRF) is a synchrotron technology that maps multiple metals in tissues by employing unique hardware and software to increase scanning speed. RS-XRF was validated by mapping and quantifying iron, zinc and copper in brain slices from Parkinson's disease (PD) and unaffected subjects. Regions and structures in the brain were readily identified by their metal complement and each metal had a unique distribution. Many zinc-rich brain regions were low in iron and vice versa. The location and amount of iron in brain regions known to be affected in PD agreed with analyses using other methods. Sample preparation is simple and standard formalin-fixed autopsy slices are suitable. RS-XRF can simultaneously and non-destructively map and quantify multiple metals and holds great promise to reveal metal pathologies associated with PD and other neurodegenerative diseases as well as diseases of metal metabolism.

  6. Automatic concrete cracks detection and mapping of terrestrial laser scan data

    Directory of Open Access Journals (Sweden)

    Mostafa Rabah

    2013-12-01

    The current paper submits a method for automatic concrete cracks detection and mapping from the data that was obtained during laser scanning survey. The method of cracks detection and mapping is achieved by three steps, namely the step of shading correction in the original image, step of crack detection and finally step of crack mapping and processing steps. The detected crack is defined in a pixel coordinate system. To remap the crack into the referred coordinate system, a reverse engineering is used. This is achieved by a hybrid concept of terrestrial laser-scanner point clouds and the corresponding camera image, i.e. a conversion from the pixel coordinate system to the terrestrial laser-scanner or global coordinate system. The results of the experiment show that the mean differences between terrestrial laser scan and the total station are about 30.5, 16.4 and 14.3 mms in x, y and z direction, respectively.

  7. Mapping chemical concentration in binary thin organic films via multi-wavelength scanning absorption microscopy (MWSAM)

    Science.gov (United States)

    Berriman, Garth; Routley, Ben; Holdsworth, John; Zhou, Xiaojing; Belcher, Warwick; Dastoor, Paul

    2014-09-01

    The composition and thickness of binary thin organic films is determined by measuring the optical absorption at multiple wavelengths across the film surface and performing a component analysis fit to absorption standards for the materials. The multiple laser wavelengths are focused onto the surface using microscope objectives and raster scanned across the film surface using a piezo-electric actuator X-Y stage. All of the wavelengths are scanned simultaneously with a frequency division multiplexing system used to separate the individual wavelength response. The composition values are in good quantitative agreement with measurements obtained by scanning transmission x-ray microscopy (STXM). This new characterization technique extends quantitative compositional mapping of thin films to thickness regimes beyond that accessible by STXM.

  8. A scanning drift tube apparatus for spatio-temporal mapping of electron swarms

    CERN Document Server

    Korolov, I; Bastykova, N Kh; Donko, Z

    2016-01-01

    A "scanning" drift tube apparatus, capable of mapping of the spatio-temporal evolution of electron swarms, developing between two plane electrodes under the effect of a homogeneous electric field, is presented. The electron swarms are initiated by photoelectron pulses and the temporal distributions of the electron flux are recorded while the electrode gap length (at a fixed electric field strength) is varied. Operation of the system is tested and verified with argon gas, the measured data are used for the evaluation of the electron bulk drift velocity. The experimental results for the space-time maps of the electron swarms - presented here for the first time - also allow clear observation of deviations from hydrodynamic transport. The swarm maps are also reproduced by particle simulations.

  9. High throughput functional epitope mapping: revisiting phage display platform to scan target antigen surface.

    Science.gov (United States)

    Rojas, Gertrudis; Tundidor, Yaima; Infante, Yanelys Cabrera

    2014-01-01

    Antibody engineering must be accompanied by mapping strategies focused on identifying the epitope recognized by each antibody to define its unique functional identity. High throughput fine specificity determination remains technically challenging. We review recent experiences aimed at revisiting the oldest and most extended display technology to develop a robust epitope mapping platform, based on the ability to manipulate target-derived molecules (ranging from the whole native antigen to antigen domains and smaller fragments) on filamentous phages. Single, multiple and combinatorial mutagenesis allowed comprehensive scanning of phage-displayed antigen surface that resulted in the identification of clusters of residues contributing to epitope formation. Functional pictures of the epitope(s) were thus delineated in the natural context. Successful mapping of antibodies against interleukin-2, epidermal growth factor and its receptor, and vascular endothelial growth factor showed the versatility of these procedures, which combine the accuracy of site-directed mutagenesis with the high throughput potential of phage display.

  10. A semi-automatic multiple view texture mapping for the surface model extracted by laser scanning

    Science.gov (United States)

    Zhang, Zhichao; Huang, Xianfeng; Zhang, Fan; Chang, Yongmin; Li, Deren

    2008-12-01

    Laser scanning is an effective way to acquire geometry data of the cultural heritage with complex architecture. After generating the 3D model of the object, it's difficult to do the exactly texture mapping for the real object. we take effort to create seamless texture maps for a virtual heritage of arbitrary topology. Texture detail is acquired directly from the real object in a light condition as uniform as we can make. After preprocessing, images are then registered on the 3D mesh by a semi-automatic way. Then we divide the mesh into mesh patches overlapped with each other according to the valid texture area of each image. An optimal correspondence between mesh patches and sections of the acquired images is built. Then, a smoothing approach is proposed to erase the seam between different images that map on adjacent mesh patches, based on texture blending. The obtained result with a Buddha of Dunhuang Mogao Grottoes is presented and discussed.

  11. Admixture Mapping Scans Identify a Locus Affecting Retinal Vascular Caliber in Hypertensive African Americans: The Atherosclerosis Risk in Communities (ARIC) Study

    OpenAIRE

    Ching-Yu Cheng; David Reich; Wong, Tien Y.; Ronald Klein; Klein, Barbara E K; Nick Patterson; Arti Tandon; Man Li; Eric Boerwinkle; A Richey Sharrett; W H Linda Kao

    2010-01-01

    Retinal vascular caliber provides information about the structure and health of the microvascular system and is associated with cardiovascular and cerebrovascular diseases. Compared to European Americans, African Americans tend to have wider retinal arteriolar and venular caliber, even after controlling for cardiovascular risk factors. This has suggested the hypothesis that differences in genetic background may contribute to racial/ethnic differences in retinal vascular caliber. Using 1,365 a...

  12. Scanned Hardcopy Maps, Prince George's County Scanned ADC Map Pages Mosaic from GIS Intergrated Solutions, Published in 2010, 1:12000 (1in=1000ft) scale, Prince George's County Office of Information Technology and Communications.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, published at 1:12000 (1in=1000ft) scale, was produced all or in part from Orthoimagery information as of 2010. It is described as...

  13. Scanned Hardcopy Maps, Prince George's County Scanned ADC Index Map from GIS Intergrated Solutions, Published in 2010, 1:100000 (1in=8333ft) scale, Prince George's County Office of Information Technology and Communications.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, published at 1:100000 (1in=8333ft) scale, was produced all or in part from Orthoimagery information as of 2010. It is described...

  14. Scanned Hardcopy Maps, Archived Tax Maps from 1992 with 1967 aerial orthophotography, Published in 1967, 1:4800 (1in=400ft) scale, Iredell County GIS.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, published at 1:4800 (1in=400ft) scale, was produced all or in part from Orthoimagery information as of 1967. It is described as...

  15. Scanned Hardcopy Maps, Highway Reconstruction Maps, Published in 2007, 1:1200 (1in=100ft) scale, Jefferson County Land Information Office.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Scanned Hardcopy Maps dataset, published at 1:1200 (1in=100ft) scale, was produced all or in part from Published Reports/Deeds information as of 2007. It is...

  16. Scanamorphos: a map-making software for Herschel and similar scanning bolometer arrays

    CERN Document Server

    Roussel, Hélène

    2012-01-01

    Scanamorphos is one of the public softwares available to post-process scan observations performed with the Herschel photometer arrays. This post-processing mainly consists in subtracting the total low-frequency noise (both its thermal and non-thermal components), masking cosmic ray hit residuals, and projecting the data onto a map. Although it was developed for Herschel, it is also applicable with minimal adjustment to scan observations made with other bolometer arrays, provided they entail sufficient redundancy; it was successfully applied to P-Artemis, an instrument operating on the APEX telescope. Contrary to most other algorithms (first developed for microwave background experiments and later adapted to Herschel), Scanamorphos does not assume any particular noise model, and does not apply any Fourier-space filtering to the data, but is an empirical tool using purely the redundancy built in the observations -- taking advantage of the fact that each portion of the sky is sampled at multiple times by multipl...

  17. Scan matching using line segment relationships for map-based localization of mobile robot

    Institute of Scientific and Technical Information of China (English)

    GE Kun-feng; CHEN Wei-dong; WANG Jing-chuan; RAN Yu-yao

    2008-01-01

    A new scan matching method for mobile robot localization is presented, which takes line segment as the feature and matches the real scans in the given reference map by relationships of the directional-defined line segments. The alignment was done by hierarchically identifying the multiple relationships and the result was re-corded in a correspondence matrix, where the best match is defined and selected for localization. It is indicated that the searching algorithm of the best match can find the ambiguities and get rid of them. This method with less computational cost works well in occluded environment, and can correct the error in pose estimation without the need for the estimation itself. The efficiency, accuracy and robustness of this method were verified by exper-iments of localization in an occluded environment and a long-distance indoor navigation.

  18. Feature-Based Laser Scan Matching and Its Application for Indoor Mapping

    Directory of Open Access Journals (Sweden)

    Jiayuan Li

    2016-08-01

    Full Text Available Scan matching, an approach to recover the relative position and orientation of two laser scans, is a very important technique for indoor positioning and indoor modeling. The iterative closest point (ICP algorithm and its variants are the most well-known techniques for such a problem. However, ICP algorithms rely highly on the initial guess of the relative transformation, which will reduce its power for practical applications. In this paper, an initial-free 2D laser scan matching method based on point and line features is proposed. We carefully design a framework for the detection of point and line feature correspondences. First, distinct feature points are detected based on an extended 1D SIFT, and line features are extracted via a modified Split-and-Merge algorithm. In this stage, we also give an effective strategy for discarding unreliable features. The point and line features are then described by a distance histogram; the pairs achieving best matching scores are accepted as potential correct correspondences. The histogram cluster technique is adapted to filter outliers and provide an accurate initial value of the rigid transformation. We also proposed a new relative pose estimation method that is robust to outliers. We use the lq-norm (0 < q < 1 metric in this approach, in contrast to classic optimization methods whose cost function is based on the l2-norm of residuals. Extensive experiments on real data demonstrate that the proposed method is almost as accurate as ICPs and is initial free. We also show that our scan matching method can be integrated into a simultaneous localization and mapping (SLAM system for indoor mapping.

  19. [Mapping stakeholders' preferences in prioritization criteria for horizon scanning in healthcare technologies].

    Science.gov (United States)

    Nascimento, Aline do; Vidal, Avila Teixeira; Almeida, Rosimary Terezinha de

    2016-08-01

    Filtration and prioritization are two basics steps in horizon scanning systems. This article aimed to map stakeholders' preferences in the Brazilian Unified National Health System (SUS) regarding filtration and prioritization criteria. Two filtration criteria (time horizon and innovation) and eight prioritization criteria (relevance to epidemiology, health policies, and clinical practice; potential impact on SUS budget, healthcare providers' costs, and mortality; safety; and legal, ethical, and social aspects) were selected. Multiple correspondence analysis was used to map stakeholders' preferences within and between groups. Two groups were more homogeneous and determinant for selection of prioritization criteria. Stakeholders' professional experience had more influence than institutional affiliations. The approach showed transparent criteria selection and analysis of stakeholders' individual preferences.

  20. Possibilities of a Personal Laser Scanning System for Forest Mapping and Ecosystem Services

    Directory of Open Access Journals (Sweden)

    Xinlian Liang

    2014-01-01

    Full Text Available A professional-quality, personal laser scanning (PLS system for collecting tree attributes was demonstrated in this paper. The applied system, which is wearable by human operators, consists of a multi-constellation navigation system and an ultra-high-speed phase-shift laser scanner mounted on a rigid baseplate and consisting of a single sensor block. A multipass-corridor-mapping method was developed to process PLS data and a 2,000 m2 forest plot was utilized in the test. The tree stem detection accuracy was 82.6%; the root mean square error (RMSE of the estimates of tree diameter at breast height (DBH was 5.06 cm; the RMSE of the estimates of tree location was 0.38 m. The relative RMSE of the DBH estimates was 14.63%. The results showed, for the first time, the potential of the PLS system in mapping large forest plots. Further research on mapping accuracy in various forest conditions, data correction methods and multi-sensoral positioning techniques is needed. The utilization of this system in different applications, such as harvester operations, should also be explored. In addition to collecting tree-level and plot-level data for forest inventory, other possible applications of PLS for forest ecosystem services include mapping of canopy gaps, measuring leaf area index of large areas, documenting and visualizing forest routes feasible for recreation, hiking and berry and mushroom picking.

  1. Possibilities of a personal laser scanning system for forest mapping and ecosystem services.

    Science.gov (United States)

    Liang, Xinlian; Kukko, Antero; Kaartinen, Harri; Hyyppä, Juha; Yu, Xiaowei; Jaakkola, Anttoni; Wang, Yunsheng

    2014-01-10

    A professional-quality, personal laser scanning (PLS) system for collecting tree attributes was demonstrated in this paper. The applied system, which is wearable by human operators, consists of a multi-constellation navigation system and an ultra-high-speed phase-shift laser scanner mounted on a rigid baseplate and consisting of a single sensor block. A multipass-corridor-mapping method was developed to process PLS data and a 2,000 m2 forest plot was utilized in the test. The tree stem detection accuracy was 82.6%; the root mean square error (RMSE) of the estimates of tree diameter at breast height (DBH) was 5.06 cm; the RMSE of the estimates of tree location was 0.38 m. The relative RMSE of the DBH estimates was 14.63%. The results showed, for the first time, the potential of the PLS system in mapping large forest plots. Further research on mapping accuracy in various forest conditions, data correction methods and multi-sensoral positioning techniques is needed. The utilization of this system in different applications, such as harvester operations, should also be explored. In addition to collecting tree-level and plot-level data for forest inventory, other possible applications of PLS for forest ecosystem services include mapping of canopy gaps, measuring leaf area index of large areas, documenting and visualizing forest routes feasible for recreation, hiking and berry and mushroom picking.

  2. Native American admixture in the Quebec founder population.

    Directory of Open Access Journals (Sweden)

    Claudia Moreau

    Full Text Available For years, studies of founder populations and genetic isolates represented the mainstream of genetic mapping in the effort to target genetic defects causing Mendelian disorders. The genetic homogeneity of such populations as well as relatively homogeneous environmental exposures were also seen as primary advantages in studies of genetic susceptibility loci that underlie complex diseases. European colonization of the St-Lawrence Valley by a small number of settlers, mainly from France, resulted in a founder effect reflected by the appearance of a number of population-specific disease-causing mutations in Quebec. The purported genetic homogeneity of this population was recently challenged by genealogical and genetic analyses. We studied one of the contributing factors to genetic heterogeneity, early Native American admixture that was never investigated in this population before. Consistent admixture estimates, in the order of one per cent, were obtained from genome-wide autosomal data using the ADMIXTURE and HAPMIX software, as well as with the fastIBD software evaluating the degree of the identity-by-descent between Quebec individuals and Native American populations. These genomic results correlated well with the genealogical estimates. Correlations are imperfect most likely because of incomplete records of Native founders' origin in genealogical data. Although the overall degree of admixture is modest, it contributed to the enrichment of the population diversity and to its demographic stratification. Because admixture greatly varies among regions of Quebec and among individuals, it could have significantly affected the homogeneity of the population, which is of importance in mapping studies, especially when rare genetic susceptibility variants are in play.

  3. Simultaneous Nanomechanical and Electrochemical Mapping: Combining Peak Force Tapping Atomic Force Microscopy with Scanning Electrochemical Microscopy.

    Science.gov (United States)

    Knittel, Peter; Mizaikoff, Boris; Kranz, Christine

    2016-06-21

    Soft electronic devices play a crucial role in, e.g., neural implants as stimulating electrodes, transducers for biosensors, or selective drug-delivery. Because of their elasticity, they can easily adapt to their environment and prevent immunoreactions leading to an overall improved long-term performance. In addition, flexible electronic devices such as stretchable displays will be increasingly used in everyday life, e.g., for so-called electronic wearables. Atomic force microscopy (AFM) is a versatile tool to characterize these micro- and nanostructured devices in terms of their topography. Using advanced imaging techniques such as peak force tapping (PFT), nanomechanical properties including adhesion, deformation, and Young's modulus can be simultaneously mapped along with surface features. However, conventional AFM provides limited laterally resolved information on electrical or electrochemical properties such as the activity of an electrode array. In this study, we present the first combination of AFM with scanning electrochemical microscopy (SECM) in PFT mode, thereby offering spatially correlated electrochemical and nanomechanical information paired with high-resolution topographical data under force control (QNM-AFM-SECM). The versatility of this combined scanning probe approach is demonstrated by mapping topographical, electrochemical, and nanomechanical properties of gold microelectrodes and of gold electrodes patterned onto polydimethylsiloxane.

  4. Interference features in scanning gate conductance maps of quantum point contacts with disorder

    Science.gov (United States)

    Kolasiński, K.; Szafran, B.; Brun, B.; Sellier, H.

    2016-08-01

    We consider quantum point contact (QPC) defined within a disordered two-dimensional electron gas as studied by scanning gate microscopy. We evaluate the conductance maps in the Landauer approach with a wave-function picture of electron transport for samples with both low and high electron mobility at finite temperatures. We discuss the spatial distribution of the impurities in the context of the branched electron flow. We reproduce the surprising temperature stability of the experimental interference fringes far from the QPC. Next, we discuss funnel-shaped features that accompany splitting of the branches visible in previous experiments. Finally, we study elliptical interference fringes formed by an interplay of scattering by the pointlike impurities and by the scanning probe. We discuss the details of the elliptical features as functions of the tip voltage and the temperature, showing that the first interference fringe is very robust against the thermal widening of the Fermi level. We present a simple analytical model that allows for extraction of the impurity positions and the electron-gas depletion radius induced by the negatively charged tip of the atomic force microscope, and apply this model on experimental scanning gate images showing such elliptical fringes.

  5. The Complex Admixture History and Recent Southern Origins of Siberian Populations.

    Science.gov (United States)

    Pugach, Irina; Matveev, Rostislav; Spitsyn, Viktor; Makarov, Sergey; Novgorodov, Innokentiy; Osakovsky, Vladimir; Stoneking, Mark; Pakendorf, Brigitte

    2016-07-01

    Although Siberia was inhabited by modern humans at an early stage, there is still debate over whether it remained habitable during the extreme cold of the Last Glacial Maximum or whether it was subsequently repopulated by peoples with recent shared ancestry. Previous studies of the genetic history of Siberian populations were hampered by the extensive admixture that appears to have taken place among these populations, because commonly used methods assume a tree-like population history and at most single admixture events. Here we analyze geogenetic maps and use other approaches to distinguish the effects of shared ancestry from prehistoric migrations and contact, and develop a new method based on the covariance of ancestry components, to investigate the potentially complex admixture history. We furthermore adapt a previously devised method of admixture dating for use with multiple events of gene flow, and apply these methods to whole-genome genotype data from over 500 individuals belonging to 20 different Siberian ethnolinguistic groups. The results of these analyses indicate that there have been multiple layers of admixture detectable in most of the Siberian populations, with considerable differences in the admixture histories of individual populations. Furthermore, most of the populations of Siberia included here, even those settled far to the north, appear to have a southern origin, with the northward expansions of different populations possibly being driven partly by the advent of pastoralism, especially reindeer domestication. These newly developed methods to analyze multiple admixture events should aid in the investigation of similarly complex population histories elsewhere.

  6. Influence of probe-sample temperature difference on thermal mapping contrast in scanning thermal microscopy imaging

    Science.gov (United States)

    Kaźmierczak-Bałata, Anna; Juszczyk, Justyna; Trefon-Radziejewska, Dominika; Bodzenta, Jerzy

    2017-03-01

    The purpose of this work is to investigate the influence of a temperature difference through a probe-sample contact on thermal contrast in Scanning Thermal Microscopy imaging. A variety of combinations of temperature differences in the probe-sample system were first analyzed based on an electro-thermal finite element model. The numerical analysis included cooling the sample, as well as heating the sample and the probe. Due to the simplicity in the implementation, experimental verification involved modifying the standard imaging technique by heating the sample. Experiments were carried out in the temperature range between 298 K and 328 K. Contrast in thermal mapping was improved for a low probe current with a heated sample.

  7. Using Mobile Laser Scanning Data for Features Extraction of High Accuracy Driving Maps

    Science.gov (United States)

    Yang, Bisheng; Liu, Yuan; Liang, Fuxun; Dong, Zhen

    2016-06-01

    High Accuracy Driving Maps (HADMs) are the core component of Intelligent Drive Assistant Systems (IDAS), which can effectively reduce the traffic accidents due to human error and provide more comfortable driving experiences. Vehicle-based mobile laser scanning (MLS) systems provide an efficient solution to rapidly capture three-dimensional (3D) point clouds of road environments with high flexibility and precision. This paper proposes a novel method to extract road features (e.g., road surfaces, road boundaries, road markings, buildings, guardrails, street lamps, traffic signs, roadside-trees, power lines, vehicles and so on) for HADMs in highway environment. Quantitative evaluations show that the proposed algorithm attains an average precision and recall in terms of 90.6% and 91.2% in extracting road features. Results demonstrate the efficiencies and feasibilities of the proposed method for extraction of road features for HADMs.

  8. Scanning laser vibrometry and luminol photomicrography to map cavitational activity around ultrasonic scalers

    Science.gov (United States)

    Felver, Bernhard; King, David C.; Lea, Simon C.; Price, Gareth J.; Walmsley, A. Damien

    2008-06-01

    Ultrasonic dental scalers are clinically used to remove deposits from tooth surfaces. A metal probe, oscillating at ultrasonic frequencies, is used to chip away deposits from the teeth. To reduce frictional heating, water flows over the operated probe in which a bi-product, cavitation, may be generated. The aim of this study is characterise probe oscillations using scanning laser vibrometry and to relate the recorded data to the occurrence of cavitation that is mapped in the course of this research. Scanning laser vibrometry (Polytec models 300-F/S and 400-3D) was used to measure the movement of various designs of operating probes and to locate vibration nodes / anti-nodes at different generator power settings and contact loads (100g and 200g). Cavitation mapping was performed by photographing the emission from a luminol solution with a digital camera (Artemis ICX285). The scaler design influences the number and location of vibration node / anti-node points. For all ultrasonic probes, the highest displacement amplitude values were recorded at the tip. The highest amounts of cavitation around the probes were recorded at the second anti-node measured from the tip. Broad, beaver-tale shaped probes produced more cavitation than slim shaped ones. The design also influences the amount of inertial cavitation around the operated instrument. The clinical relevance is that broad, beaver-tale shaped probes are unlikely to reach subgingival areas of the tooth. Further research is required to design probes that will be clinically superior to cleaning this area of the tooth.

  9. CT Scan Mapping of Splenic Flexure in Relation to Spleen and its Clinical Implications.

    Science.gov (United States)

    Saber, Alan A; Dervishaj, Ornela; Aida, Samer S; Christos, Paul J; Dakhel, Mahmoud

    2016-05-01

    Splenic flexure mobilization is a challenging step during left colon resection. The maneuver places the spleen at risk for injury. To minimize this risk, we conducted this study for CT scan mapping of splenic flexure in relation to the spleen. One hundred and sixty CT scans of abdomen were reviewed. The level of the splenic flexure was determined in relation to hilum and lower pole of spleen. These levels were compared with patient demographics. Statistical analysis was performed using Fisher's exact test. The splenic flexure was above the hilum of the spleen in 95 patients (67.86%), at the splenic hilum level in 11 patents (7.88%), between the hilum and lower pole of the spleen in 12 (8.57%), at the lower pole of the spleen in 15 (10.7%) patients and 7 (5%) patients has a splenic flexure that lied below the lower pole of the spleen. Patient demographics showed no statistical significance in regard to splenic flexure location. Splenic flexure lies above the hilum of the spleen in majority of patients. This should be considered as part of operative strategies for left colon resection.

  10. Secondary eclipse scanning of HD189733b: The perspectives of mapping distant worlds

    CERN Document Server

    de Wit, Julien; Demory, Brice-Olivier; Seager, Sara

    2012-01-01

    Context. Mapping the brightness distribution of exoplanets is the next frontier for exoplanet infrared photometry studies. For tidally-locked hot Jupiters that transit and are eclipsed by their host star with non-zero impact parameter, the first steps are now possible. Aims. The aim is to use eclipse scanning from occultation ingress/egress and phase curve measurements to constrain exoplanet large-scale brightness structure. Methods. We use archived Spitzer/IRAC 8 {\\mu}m data of HD189733 in a global MCMC procedure encompassing six transits, eight secondary eclipses, and a phase curve in a two-step analysis. The first step derives the planet-star system parameters. The second step investigates the structure found in eclipse scanning, using the previous planet-star system parameter derivation as Gaussian priors. Results. We find a 5-sigma deviation from the expected occultation ingress/egress shape for a uniform brightness disk, and demonstrate that this is dominated by large-scale brightness structure and not ...

  11. Mapping nanoscale thermal transfer in-liquid environment-immersion scanning thermal microscopy.

    Science.gov (United States)

    Tovee, Peter D; Kolosov, Oleg V

    2013-11-22

    Nanoscale heat transport is of increasing importance as it often defines performance of modern processors and thermoelectric nanomaterials, and affects functioning of chemical sensors and biosensors. Scanning thermal microscopy (SThM) is the leading tool for nanoscale mapping of thermal properties, but it is often negatively affected by unstable tip-surface thermal contacts. While operating SThM in-liquid environment may allow unimpeded thermal contact and open new application areas, it has so far been regarded as impossible due to increased heat dissipation into the liquid, and the perceived reduced spatial thermal resolution. Nevertheless, in this paper we show that such liquid immersion SThM (iSThM) is fully feasible and, while its thermal sensitivity and spatial resolution is somewhat below that of in-air SThM, it has sufficient thermal contrast to detect thermal conductivity variations in few tens of nm thick graphite nanoflake and metal-polymer nanostructured interconnects. Our results confirm that thermal sensing in iSThM can provide nanoscale resolution on the order of 30 nm, that, coupled with the absence of tip snap-in due to the elimination of capillary forces, opens the possibility for nanoscale thermal mapping in liquids, including thermal phenomena in energy storage devices, catalysts and biosystems.

  12. Mapping Carrier Dynamics on Material Surfaces in Space and Time using Scanning Ultrafast Electron Microscopy.

    Science.gov (United States)

    Sun, Jingya; Adhikari, Aniruddha; Shaheen, Basamat S; Yang, Haoze; Mohammed, Omar F

    2016-03-17

    Selectively capturing the ultrafast dynamics of charge carriers on materials surfaces and at interfaces is crucial to the design of solar cells and optoelectronic devices. Despite extensive research efforts over the past few decades, information and understanding about surface-dynamical processes, including carrier trapping and recombination remains extremely limited. A key challenge is to selectively map such dynamic processes, a capability that is hitherto impractical by time-resolved laser techniques, which are limited by the laser's relatively large penetration depth and consequently these techniques record mainly bulk information. Such surface dynamics can only be mapped in real space and time by applying four-dimensional (4D) scanning ultrafast electron microscopy (S-UEM), which records snapshots of materials surfaces with nanometer spatial and subpicosecond temporal resolutions. In this method, the secondary electron (SE) signal emitted from the sample's surface is extremely sensitive to the surface dynamics and is detected in real time. In several unique applications, we spatially and temporally visualize the SE energy gain and loss, the charge carrier dynamics on the surface of InGaN nanowires and CdSe single crystal and its powder film. We also discuss the mechanisms for the observed dynamics, which will be the foundation for future potential applications of S-UEM to a wide range of studies on material surfaces and device interfaces.

  13. Wide-Area Mapping of Forest with National Airborne Laser Scanning and Field Inventory Datasets

    Science.gov (United States)

    Monnet, J.-M.; Ginzler, C.; Clivaz, J.-C.

    2016-06-01

    Airborne laser scanning (ALS) remote sensing data are now available for entire countries such as Switzerland. Methods for the estimation of forest parameters from ALS have been intensively investigated in the past years. However, the implementation of a forest mapping workflow based on available data at a regional level still remains challenging. A case study was implemented in the Canton of Valais (Switzerland). The national ALS dataset and field data of the Swiss National Forest Inventory were used to calibrate estimation models for mean and maximum height, basal area, stem density, mean diameter and stem volume. When stratification was performed based on ALS acquisition settings and geographical criteria, satisfactory prediction models were obtained for volume (R2 = 0.61 with a root mean square error of 47 %) and basal area (respectively 0.51 and 45 %) while height variables had an error lower than 19%. This case study shows that the use of nationwide ALS and field datasets for forest resources mapping is cost efficient, but additional investigations are required to handle the limitations of the input data and optimize the accuracy.

  14. Nanoscale structural and functional mapping of nacre by scanning probe microscopy techniques.

    Science.gov (United States)

    Zhou, Xilong; Miao, Hongchen; Li, Faxin

    2013-12-01

    Nacre has received great attention due to its nanoscale hierarchical structure and extraordinary mechanical properties. Meanwhile, the nanoscale piezoelectric properties of nacre have also been investigated but the structure-function relationship has never been addressed. In this work, firstly we realized quantitative nanomechanical mapping of nacre of a green abalone using atomic force acoustic microscopy (AFAM). The modulus of the mineral tablets is determined to be ~80 GPa and that of the organic biopolymer no more than 23 GPa, and the organic-inorganic interface width is determined to be about 34 ± 9 nm. Then, we conducted both AFAM and piezoresponse force microscopy (PFM) mapping in the same scanning area to explore the correlations between the nanomechanical and piezoelectric properties. The PFM testing shows that the organic biopolymer exhibits a significantly stronger piezoresponse than the mineral tablets, and they permeate each other, which is very difficult to reproduce in artificial materials. Finally, the phase hysteresis loops and amplitude butterfly loops were also observed using switching spectroscopy PFM, implying that nacre may also be a bio-ferroelectric material. The obtained nanoscale structural and functional properties of nacre could be very helpful in understanding its deformation mechanism and designing biomimetic materials of extraordinary properties.

  15. Mapping Carrier Dynamics on Material Surfaces in Space and Time using Scanning Ultrafast Electron Microscopy

    KAUST Repository

    Sun, Jingya

    2016-02-25

    Selectively capturing the ultrafast dynamics of charge carriers on materials surfaces and at interfaces is crucial to the design of solar cells and optoelectronic devices. Despite extensive research efforts over the past few decades, information and understanding about surface-dynamical processes, including carrier trapping and recombination remains extremely limited. A key challenge is to selectively map such dynamic processes, a capability that is hitherto impractical by time-resolved laser techniques, which are limited by the laser’s relatively large penetration depth and consequently they record mainly bulk information. Such surface dynamics can only be mapped in real space and time by applying four-dimensional (4D) scanning ultrafast electron microscopy (S-UEM), which records snapshots of materials surfaces with nanometer spatial and sub-picosecond temporal resolutions. In this method, the secondary electron (SE) signal emitted from the sample’s surface is extremely sensitive to the surface dynamics and is detected in real time. In several unique applications, we spatially and temporally visualize the SE energy gain and loss, the charge carrier dynamics on the surface of InGaN nanowires and CdSe single crystals and its powder film. We also provide the mechanisms for the observed dynamics, which will be the foundation for future potential applications of S-UEM to a wide range of studies on material surfaces and device interfaces.

  16. Nanoscale structural and functional mapping of nacre by scanning probe microscopy techniques

    Science.gov (United States)

    Zhou, Xilong; Miao, Hongchen; Li, Faxin

    2013-11-01

    Nacre has received great attention due to its nanoscale hierarchical structure and extraordinary mechanical properties. Meanwhile, the nanoscale piezoelectric properties of nacre have also been investigated but the structure-function relationship has never been addressed. In this work, firstly we realized quantitative nanomechanical mapping of nacre of a green abalone using atomic force acoustic microscopy (AFAM). The modulus of the mineral tablets is determined to be ~80 GPa and that of the organic biopolymer no more than 23 GPa, and the organic-inorganic interface width is determined to be about 34 +/- 9 nm. Then, we conducted both AFAM and piezoresponse force microscopy (PFM) mapping in the same scanning area to explore the correlations between the nanomechanical and piezoelectric properties. The PFM testing shows that the organic biopolymer exhibits a significantly stronger piezoresponse than the mineral tablets, and they permeate each other, which is very difficult to reproduce in artificial materials. Finally, the phase hysteresis loops and amplitude butterfly loops were also observed using switching spectroscopy PFM, implying that nacre may also be a bio-ferroelectric material. The obtained nanoscale structural and functional properties of nacre could be very helpful in understanding its deformation mechanism and designing biomimetic materials of extraordinary properties.

  17. Simultaneous Interfacial Reactivity and Topography Mapping with Scanning Ion Conductance Microscopy.

    Science.gov (United States)

    Momotenko, Dmitry; McKelvey, Kim; Kang, Minkyung; Meloni, Gabriel N; Unwin, Patrick R

    2016-03-01

    Scanning ion conductance microscopy (SICM) is a powerful technique for imaging the topography of a wide range of materials and interfaces. In this report, we develop the use and scope of SICM, showing how it can be used for mapping spatial distributions of ionic fluxes due to (electro)chemical reactions occurring at interfaces. The basic idea is that there is a change of ion conductance inside a nanopipet probe when it approaches an active site, where the ionic composition is different to that in bulk solution, and this can be sensed via the current flow in the nanopipet with an applied bias. Careful tuning of the tip potential allows the current response to be sensitive to either topography or activity, if desired. Furthermore, the use of a distance modulation SICM scheme allows reasonably faithful probe positioning using the resulting ac response, irrespective of whether there is a reaction at the interface that changes the local ionic composition. Both strategies (distance modulation or tuned bias) allow simultaneous topography-activity mapping with a single channel probe. The application of SICM reaction imaging is demonstrated on several examples, including voltammetric mapping of electrocatalytic reactions on electrodes and high-speed electrochemical imaging at rates approaching 4 s per image frame. These two distinct approaches provide movies of electrochemical current as a function of potential with hundreds of frames (images) of surface reactivity, to reveal a wealth of spatially resolved information on potential- (and time) dependent electrochemical phenomena. The experimental studies are supported by detailed finite element method modeling that places the technique on a quantitative footing.

  18. Semi-automatic mapping of cultural heritage from airborne laser scanning using deep learning

    Science.gov (United States)

    Due Trier, Øivind; Salberg, Arnt-Børre; Holger Pilø, Lars; Tonning, Christer; Marius Johansen, Hans; Aarsten, Dagrun

    2016-04-01

    This paper proposes to use deep learning to improve semi-automatic mapping of cultural heritage from airborne laser scanning (ALS) data. Automatic detection methods, based on traditional pattern recognition, have been applied in a number of cultural heritage mapping projects in Norway for the past five years. Automatic detection of pits and heaps have been combined with visual interpretation of the ALS data for the mapping of deer hunting systems, iron production sites, grave mounds and charcoal kilns. However, the performance of the automatic detection methods varies substantially between ALS datasets. For the mapping of deer hunting systems on flat gravel and sand sediment deposits, the automatic detection results were almost perfect. However, some false detections appeared in the terrain outside of the sediment deposits. These could be explained by other pit-like landscape features, like parts of river courses, spaces between boulders, and modern terrain modifications. However, these were easy to spot during visual interpretation, and the number of missed individual pitfall traps was still low. For the mapping of grave mounds, the automatic method produced a large number of false detections, reducing the usefulness of the semi-automatic approach. The mound structure is a very common natural terrain feature, and the grave mounds are less distinct in shape than the pitfall traps. Still, applying automatic mound detection on an entire municipality did lead to a new discovery of an Iron Age grave field with more than 15 individual mounds. Automatic mound detection also proved to be useful for a detailed re-mapping of Norway's largest Iron Age grave yard, which contains almost 1000 individual graves. Combined pit and mound detection has been applied to the mapping of more than 1000 charcoal kilns that were used by an iron work 350-200 years ago. The majority of charcoal kilns were indirectly detected as either pits on the circumference, a central mound, or both

  19. Delayed image of iodine-123 iomazenil as a relative map of benzodiazepine receptor binding: the optimal scan time

    Energy Technology Data Exchange (ETDEWEB)

    Onishi, Yoshihiro [Nihon Medi-Physics Co. Ltd., Nishinomiya (Japan); Yonekura, Yoshiharu [Fukui Medical School, Fukui (Japan); Tanaka, Fumiko [Kyoto University School of Medicine, Kyoto (Japan); Nishizawa, Sadahiko [Kyoto University School of Medicine, Kyoto (Japan); Okazawa, Hidehiko [Kyoto University School of Medicine, Kyoto (Japan); Ishizu, Koichi [Kyoto University School of Medicine, Kyoto (Japan); Fujita, Toru [Kyoto University School of Medicine, Kyoto (Japan); Konishi, Junji [Kyoto University School of Medicine, Kyoto (Japan); Mukai, Takao [Kyoto College of Medical Technology, Kyoto (Japan)

    1996-11-01

    ``Delayed`` single-photon emission tomograpic (SPET) images after an intravenous bolus injection of iodine-123 iomazenil have been used as a relative map of benzodiazepine receptor binding. We determined the optimal scan time for obtaining such a map and assessed the errors of the map. SPET and blood data from six healthy volunteers and five patients were used. A three-compartment kinetic model was employed in simulation studies and analyses of actual data. The simulation studies suggested that, in the normal brain, the scan time at which a single SPET image best represented the relative receptor binding was 3.0-3.5 h post-injection. This finding was supported by actual data from the volunteers. The simulation studies also suggested that the optimal scan time was not greatly changed by the variability of the input functions, and that the error in the SPET image contrast in the vicinity of the optimal scan time was not increased by changes in the tracer kinetics in the entire brain. The SPET image contrast in the patients at 3.0 h post-injection agreed well with the reference receptor binding estimated by kinetic analysis, with a mean error of 3.6%. These findings support the use of a single SPET image after bolus injection of [{sup 123}I]iomazenil as a relative map of benzodiazepine receptor binding. For this purpose, a SPET scan time of 3.0-3.5 h post-injection is recommended. (orig.). With 5 figs., 1 tab.

  20. Valorization of Local Mineral Admixtures in Concretes

    Directory of Open Access Journals (Sweden)

    Boudchicha Abdelaziz

    2014-04-01

    Full Text Available This study is an extension of previous researches on mortars with mineral admixtures and super-plasticizers. In this way, the same methodology was applied to concretes and the use of mineral admixture was limited to low cost materials available in Algeria as limestone, pozzolan and blast furnace slag, with current cement and super-plasticizer. The experimental methodology used was based on the volume substitution of the cement by admixtures in mixtures with the absolute volume of the solid phases and workability preserved constant. The main results achieved showed that the super-plasticizer demand of concretes depends on the nature and the quantity of the incorporated admixture. The combined use of admixtures and super-plasticizer has generally a favourable effect on compressive strengths at 07 and 28 days at low rates of cement substitution, which vary significantly with the nature, fineness and quantity of the used admixtures. At 07 days, limestone admixtures give better improvements and reach more than 20 % of gain to the compressive strength of the reference concrete with no admixtures or super-plasticizer, at 10 % of the cement substitution and still better until 30 %. At 28 days, blast furnace slag admixtures give better improvements at 28 days and reach more than 20 % of gain to the compressive strength of the reference concrete at 20 % of the cement substitution and still better until 30 %. This contribution to the compressive strength is explained on the one hand by the reduction of the quantity of water in the mixtures at the same consistency, by the use of the super-plasticizer and on another hand by the activity of Limestone admixtures at early ages and to the latent hydraulic properties of blast furnace slag at 28 days.

  1. An interactive mapping tool for visualizing lacunarity of laser scanned point clouds

    Science.gov (United States)

    Kania, Adam; Székely, Balázs

    2016-04-01

    Lacunarity, a measure of the spatial distribution of the empty space in a certain model or real space over large spatial scales, is found to be a useful descriptive quantity in many fields using imagery, including, among others, geology, dentistry, neurology. Its application in ecology was suggested more than 20 years ago. The main problem of its application was the lack of appropriate high resolution data. Nowadays, full-waveform laser scanning, also known as FWF LiDAR, provides the tool for mapping the vegetation in unprecedented details and accuracy. Consequently, the lacunarity concept can be revitalized, in order to study the structure of the vegetation in this sense as well. Calculation of lacunarity, even if it is done in two dimensions (2D), is still has its problems: on one hand it is a number-crunching procedure, on the other hand, it produces 4D results: at each 3D point it returns a set of data that are function of scale. These data sets are difficult to visualize, to evaluate, and to compare. In order to solve this problem, an interactive mapping tool has been conceptualized that is designed to manipulate and visualize the data, lets the user set parameters for best visualization or comparison results. The system is able to load large amounts of data, visualize them as lacunarity curves, or map view as horizontal slices or in 3D point clouds coloured according to the user's choice. Lacunarity maps are presented as a series of (usually) horizontal profiles, e.g. rasters, which cells contain color-mapped values of selected lacunarity of the point cloud. As lacunarity is usually analysed in a series of successive windows sizes, the tool can show a series of rasters with sequentially animated lacunarity maps calculated for various window sizes. A very fast switching of colour schemes is possible to facilitate rapid visual feedback to better understand underlying data patterns exposed by lacunarity functions. In the comparison mode, two sites (or two areas

  2. Mapping of methane from Scanning Imaging Absorption Spectrometer for Atmospheric Cartography (SCIAMACHY)

    Science.gov (United States)

    Tan, K. C.; Lim, H. S.; MatJafri, M. Z.

    2012-11-01

    Among all the greenhouse gases, methane is the most dynamic and abundant greenhouse gas in the atmosphere. The global concentrations of atmospheric methane has increased more than doubled since pre-industrial times, with a current globally-averaged mixing ratio of ~ 1750 ppbv. Due to its high growth rate, methane brings significant effects on climate and atmospheric chemistry. There has a significant gap for variables between anthropogenic and natural sources and sinks of methane. Satellite observation of methane has been identified that it can provide the precise and accurate data globally, which sensitive to the small regional biases. We present measurements from Scanning Imaging Absorption Spectrometer for Atmospheric Cartography (SCIAMACHY) included on the European environmental satellite ENVISAT, launched on 1st of March 2002. Main objective of this study is to examine the methane distribution over Peninsular Malaysia using SCIAMACHY level-3 data. They are derived from the near-infrared nadir observations of the SCIAMACHY at the University of Bremen through scientific WFM-DOAS retrieval algorithm version 2.0.2.Maps of time averaged (yearly, tri-monthly) methane was generated and analyzed over Peninsular Malaysia for the year 2003 using PCI Geomatica 10.3 image processing software. The maps show dry-air column averaged mixing ratios of methane (denoted XCH4). It was retrieved using the interpolation technique. The concentration changes within boundary layer at all altitude levels are equally sensitive through the SCIAMACHY near-infrared nadir observations. Hence, we can make observation of methane at surface source region. The results successfully identify the area with highest and lowest concentration of methane at Peninsular Malaysia using SCIAMACHY data. Therefore, the study is suitable to examine the distribution of methane at tropical region.

  3. Vectorial mapping of noncollinear antiferromagnetic structure of semiconducting FeSe surface with spin-polarized scanning tunneling microscopy

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, K. F.; Yang, Fang; Song, Y. R. [Key Laboratory of Artificial Structures and Quantum Control (Ministry of Education), Department of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240 (China); Zhang, Xiaole [Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240 (China); The State Key Laboratory of Advanced Optical Communication Systems and Networks, Department of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240 (China); Chen, Xianfeng [The State Key Laboratory of Advanced Optical Communication Systems and Networks, Department of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240 (China); Liu, Canhua; Qian, Dong; Gao, C. L., E-mail: clgao@sjtu.edu.cn; Jia, Jin-Feng [Key Laboratory of Artificial Structures and Quantum Control (Ministry of Education), Department of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240 (China); Collaborative Innovation Center of Advanced Microstructures, Nanjing (China); Luo, Weidong, E-mail: wdluo@sjtu.edu.cn [Key Laboratory of Artificial Structures and Quantum Control (Ministry of Education), Department of Physics and Astronomy, Shanghai Jiao Tong University, Shanghai 200240 (China); Institute of Natural Sciences, Shanghai Jiao Tong University, Shanghai 200240 (China); Collaborative Innovation Center of Advanced Microstructures, Nanjing (China)

    2016-02-08

    Antiferromagnetic semiconductors gain increasing interest due to their possible application in spintronics. Using spin polarized scanning tunneling microscopy operating in a vector field, we mapped the noncollinear antiferromagnetic spin structure of a semiconducting hexagonal FeSe surface on the atomic scale. The surface possesses an in-plane compensated Néel structure which is further confirmed by first-principles calculations.

  4. The Impact of Sources of Variability on Parametric Response Mapping of Lung CT Scans.

    Science.gov (United States)

    Boes, Jennifer L; Bule, Maria; Hoff, Benjamin A; Chamberlain, Ryan; Lynch, David A; Stojanovska, Jadranka; Martinez, Fernando J; Han, Meilan K; Kazerooni, Ella A; Ross, Brian D; Galbán, Craig J

    2015-09-01

    Parametric response mapping (PRM) of inspiration and expiration computed tomography (CT) images improves the radiological phenotyping of chronic obstructive pulmonary disease (COPD). PRM classifies individual voxels of lung parenchyma as normal, emphysematous, or nonemphysematous air trapping. In this study, bias and noise characteristics of the PRM methodology to CT and clinical procedures were evaluated to determine best practices for this quantitative technique. Twenty patients of varying COPD status with paired volumetric inspiration and expiration CT scans of the lungs were identified from the baseline COPD-Gene cohort. The impact of CT scanner manufacturer and reconstruction kernels were evaluated as potential sources of variability in PRM measurements along with simulations to quantify the impact of inspiration/expiration lung volume levels, misregistration, and image spacing on PRM measurements. Negligible variation in PRM metrics was observed when CT scanner type and reconstruction were consistent and inspiration/expiration lung volume levels were near target volumes. CT scanner Hounsfield unit drift occurred but remained difficult to ameliorate. Increasing levels of image misregistration and CT slice spacing were found to have a minor effect on PRM measurements. PRM-derived values were found to be most sensitive to lung volume levels and mismatched reconstruction kernels. As with other quantitative imaging techniques, reliable PRM measurements are attainable when consistent clinical and CT protocols are implemented.

  5. Mapping Henry: Synchrotron-sourced X-ray fluorescence mapping and ultra-high-definition scanning of an early Tudor portrait of Henry VIII

    Energy Technology Data Exchange (ETDEWEB)

    Dredge, Paula; Ives, Simon [Art Gallery of New South Wales (AGNSW), Sydney, NSW (Australia); Howard, Daryl L.; Spiers, Kathryn M. [Australian Synchrotron, Clayton, VIC (Australia); Yip, Andrew [Art Gallery of New South Wales (AGNSW), Sydney, NSW (Australia); University of New South Wales, Laboratory for Innovation in Galleries, Libraries, Archives and Museums (iGLAM), National Institute for Experimental Arts, Sydney, NSW (Australia); Kenderdine, Sarah [University of New South Wales, Laboratory for Innovation in Galleries, Libraries, Archives and Museums (iGLAM), National Institute for Experimental Arts, Sydney, NSW (Australia)

    2015-11-15

    A portrait of Henry VIII on oak panel c. 1535 has recently undergone technical examination to inform questions regarding authorship and the painting's relationship to a group of similar works in the collections of the National Portrait Gallery, London, and the Society of Antiquaries. Due to previous conservation treatments of the painting, the conventional transmission X-radiograph image was difficult to interpret. As a result, the painting underwent high-definition X-ray fluorescence (XRF) elemental mapping on the X-ray fluorescence microscopy beamline of the Australian Synchrotron. Scans were conducted at 12.6 and 18.5 keV, below and above the lead (Pb) L edges, respectively. Typical scan parameters were 120 μm pixel size at 7 ms dwell time, with the largest scan covering an area 545 x 287 mm{sup 2} collected in 23 h (10.8 MP). XRF mapping of the panel has guided the conservation treatment of the painting and the revelation of previously obscured features. It has also provided insight into the process of making of the painting. The informative and detailed elemental maps, alongside ultra-high-definition scans of the painting undertaken before and after varnish and over-paint removal, have assisted in comparison of the finely painted details with the London paintings. The resolution offered by the combination of imaging techniques identifies pigment distribution at an extremely fine scale, enabling a new understanding of the artist's paint application. (orig.)

  6. Mapping Natura 2000 Habitat Conservation Status in a Pannonic Salt Steppe with Airborne Laser Scanning

    Directory of Open Access Journals (Sweden)

    András Zlinszky

    2015-03-01

    Full Text Available Natura 2000 Habitat Conservation Status is currently evaluated based on fieldwork. However, this is proving to be unfeasible over large areas. The use of remote sensing is increasingly encouraged but covering the full range of ecological variables by such datasets and ensuring compatibility with the traditional assessment methodology has not been achieved yet. We aimed to test Airborne Laser Scanning (ALS as a source for mapping all variables required by the local official conservation status assessment scheme and to develop an automated method that calculates Natura 2000 conservation status at 0.5 m raster resolution for 24 km2 of Pannonic Salt Steppe habitat (code 1530. We used multi-temporal (summer and winter ALS point clouds with full-waveform recording and a density of 10 pt/m2. Some required variables were derived from ALS product rasters; others involved vegetation classification layers calculated by machine learning and fuzzy categorization. Thresholds separating favorable and unfavorable values of each variable required by the national assessment scheme were manually calibrated from 10 plots where field-based assessment was carried out. Rasters representing positive and negative scores for each input variable were integrated in a ruleset that exactly follows the Hungarian Natura 2000 assessment scheme for grasslands. Accuracy of each parameter and the final conservation status score and category was evaluated by 10 independent assessment plots. We conclude that ALS is a suitable data source for Natura 2000 assessments in grasslands, and that the national grassland assessment scheme can successfully be used as a GIS processing model for conservation status, ensuring that the output is directly comparable with traditional field based assessments.

  7. Geomorphological Mapping with Terrestrial Laser Scanning and Uav-Based Imaging

    Science.gov (United States)

    Tilly, N.; Kelterbaum, D.; Zeese, R.

    2016-06-01

    High-resolution digital elevation models (DEMs) are useful for the detailed mapping of geomorphological features. Nowadays various sensors and platforms are available to collect 3D data. The presented study compares terrestrial laser scanning (TLS) and low-cost unmanned aerial vehicles (UAV)-based imaging in terms of their usability for capturing small-scale surface structures. In October 2014 and June 2015 measurements with both systems were carried out in an episodically water-filled karst depression under pasture farming in the region of Hohenlohe (Southwest Germany). The overall aims were to establish high-resolution DEMs and monitor changes of the relief caused by dissolution and compare the advantages and drawbacks of both systems for such studies. Due to the short time between the campaigns the clear detection of temporal changes was hardly possible. However, the multi-temporal campaigns allowed an extensive investigation of the usability of both sensors under different environmental conditions. In addition to the remote sensing measurements, the coordinates of several positions in the study area were measured with a RTK-DGPS system as independent reference data sets in both campaigns. The TLS- and UAV-derived DEM heights at these positions were validated against the DGPS-derived heights. The accuracy of the TLS-derived values is supported by low mean differences between TLS and DGPS measurements while the UAV-derived models show a weaker performance. In the future years additional simultaneous measurements with both approaches under more similar vegetation conditions are necessary to detect surface movements. Moreover, by investigating the subsurface the interaction of above and below ground processes might be detected.

  8. Development of Kinematic 3D Laser Scanning System for Indoor Mapping and As-Built BIM Using Constrained SLAM

    Directory of Open Access Journals (Sweden)

    Jaehoon Jung

    2015-10-01

    Full Text Available The growing interest and use of indoor mapping is driving a demand for improved data-acquisition facility, efficiency and productivity in the era of the Building Information Model (BIM. The conventional static laser scanning method suffers from some limitations on its operability in complex indoor environments, due to the presence of occlusions. Full scanning of indoor spaces without loss of information requires that surveyors change the scanner position many times, which incurs extra work for registration of each scanned point cloud. Alternatively, a kinematic 3D laser scanning system, proposed herein, uses line-feature-based Simultaneous Localization and Mapping (SLAM technique for continuous mapping. Moreover, to reduce the uncertainty of line-feature extraction, we incorporated constrained adjustment based on an assumption made with respect to typical indoor environments: that the main structures are formed of parallel or orthogonal line features. The superiority of the proposed constrained adjustment is its reduction for uncertainties of the adjusted lines, leading to successful data association process. In the present study, kinematic scanning with and without constrained adjustment were comparatively evaluated in two test sites, and the results confirmed the effectiveness of the proposed system. The accuracy of the 3D mapping result was additionally evaluated by comparison with the reference points acquired by a total station: the Euclidean average distance error was 0.034 m for the seminar room and 0.043 m for the corridor, which satisfied the error tolerance for point cloud acquisition (0.051 m according to the guidelines of the General Services Administration for BIM accuracy.

  9. Development of kinematic 3D laser scanning system for indoor mapping and as-built BIM using constrained SLAM.

    Science.gov (United States)

    Jung, Jaehoon; Yoon, Sanghyun; Ju, Sungha; Heo, Joon

    2015-10-16

    The growing interest and use of indoor mapping is driving a demand for improved data-acquisition facility, efficiency and productivity in the era of the Building Information Model (BIM). The conventional static laser scanning method suffers from some limitations on its operability in complex indoor environments, due to the presence of occlusions. Full scanning of indoor spaces without loss of information requires that surveyors change the scanner position many times, which incurs extra work for registration of each scanned point cloud. Alternatively, a kinematic 3D laser scanning system, proposed herein, uses line-feature-based Simultaneous Localization and Mapping (SLAM) technique for continuous mapping. Moreover, to reduce the uncertainty of line-feature extraction, we incorporated constrained adjustment based on an assumption made with respect to typical indoor environments: that the main structures are formed of parallel or orthogonal line features. The superiority of the proposed constrained adjustment is its reduction for uncertainties of the adjusted lines, leading to successful data association process. In the present study, kinematic scanning with and without constrained adjustment were comparatively evaluated in two test sites, and the results confirmed the effectiveness of the proposed system. The accuracy of the 3D mapping result was additionally evaluated by comparison with the reference points acquired by a total station: the Euclidean average distance error was 0.034 m for the seminar room and 0.043 m for the corridor, which satisfied the error tolerance for point cloud acquisition (0.051 m) according to the guidelines of the General Services Administration for BIM accuracy.

  10. Development of Kinematic 3D Laser Scanning System for Indoor Mapping and As-Built BIM Using Constrained SLAM

    Science.gov (United States)

    Jung, Jaehoon; Yoon, Sanghyun; Ju, Sungha; Heo, Joon

    2015-01-01

    The growing interest and use of indoor mapping is driving a demand for improved data-acquisition facility, efficiency and productivity in the era of the Building Information Model (BIM). The conventional static laser scanning method suffers from some limitations on its operability in complex indoor environments, due to the presence of occlusions. Full scanning of indoor spaces without loss of information requires that surveyors change the scanner position many times, which incurs extra work for registration of each scanned point cloud. Alternatively, a kinematic 3D laser scanning system, proposed herein, uses line-feature-based Simultaneous Localization and Mapping (SLAM) technique for continuous mapping. Moreover, to reduce the uncertainty of line-feature extraction, we incorporated constrained adjustment based on an assumption made with respect to typical indoor environments: that the main structures are formed of parallel or orthogonal line features. The superiority of the proposed constrained adjustment is its reduction for uncertainties of the adjusted lines, leading to successful data association process. In the present study, kinematic scanning with and without constrained adjustment were comparatively evaluated in two test sites, and the results confirmed the effectiveness of the proposed system. The accuracy of the 3D mapping result was additionally evaluated by comparison with the reference points acquired by a total station: the Euclidean average distance error was 0.034 m for the seminar room and 0.043 m for the corridor, which satisfied the error tolerance for point cloud acquisition (0.051 m) according to the guidelines of the General Services Administration for BIM accuracy. PMID:26501292

  11. Mapping Vineyard Leaf Area Using Mobile Terrestrial Laser Scanners: Should Rows be Scanned On-the-Go or Discontinuously Sampled?

    Directory of Open Access Journals (Sweden)

    Ignacio del-Moral-Martínez

    2016-01-01

    Full Text Available The leaf area index (LAI is defined as the one-side leaf area per unit ground area, and is probably the most widely used index to characterize grapevine vigor. However, LAI varies spatially within vineyard plots. Mapping and quantifying this variability is very important for improving management decisions and agricultural practices. In this study, a mobile terrestrial laser scanner (MTLS was used to map the LAI of a vineyard, and then to examine how different scanning methods (on-the-go or discontinuous systematic sampling may affect the reliability of the resulting raster maps. The use of the MTLS allows calculating the enveloping vegetative area of the canopy, which is the sum of the leaf wall areas for both sides of the row (excluding gaps and the projected upper area. Obtaining the enveloping areas requires scanning from both sides one meter length section along the row at each systematic sampling point. By converting the enveloping areas into LAI values, a raster map of the latter can be obtained by spatial interpolation (kriging. However, the user can opt for scanning on-the-go in a continuous way and compute 1-m LAI values along the rows, or instead, perform the scanning at discontinuous systematic sampling within the plot. An analysis of correlation between maps indicated that MTLS can be used discontinuously in specific sampling sections separated by up to 15 m along the rows. This capability significantly reduces the amount of data to be acquired at field level, the data storage capacity and the processing power of computers.

  12. TIPS bilateral noise reduction in 4D CT perfusion scans produces high-quality cerebral blood flow maps

    Science.gov (United States)

    Mendrik, Adriënne M.; Vonken, Evert-jan; van Ginneken, Bram; de Jong, Hugo W.; Riordan, Alan; van Seeters, Tom; Smit, Ewoud J.; Viergever, Max A.; Prokop, Mathias

    2011-07-01

    Cerebral computed tomography perfusion (CTP) scans are acquired to detect areas of abnormal perfusion in patients with cerebrovascular diseases. These 4D CTP scans consist of multiple sequential 3D CT scans over time. Therefore, to reduce radiation exposure to the patient, the amount of x-ray radiation that can be used per sequential scan is limited, which results in a high level of noise. To detect areas of abnormal perfusion, perfusion parameters are derived from the CTP data, such as the cerebral blood flow (CBF). Algorithms to determine perfusion parameters, especially singular value decomposition, are very sensitive to noise. Therefore, noise reduction is an important preprocessing step for CTP analysis. In this paper, we propose a time-intensity profile similarity (TIPS) bilateral filter to reduce noise in 4D CTP scans, while preserving the time-intensity profiles (fourth dimension) that are essential for determining the perfusion parameters. The proposed TIPS bilateral filter is compared to standard Gaussian filtering, and 4D and 3D (applied separately to each sequential scan) bilateral filtering on both phantom and patient data. Results on the phantom data show that the TIPS bilateral filter is best able to approach the ground truth (noise-free phantom), compared to the other filtering methods (lowest root mean square error). An observer study is performed using CBF maps derived from fifteen CTP scans of acute stroke patients filtered with standard Gaussian, 3D, 4D and TIPS bilateral filtering. These CBF maps were blindly presented to two observers that indicated which map they preferred for (1) gray/white matter differentiation, (2) detectability of infarcted area and (3) overall image quality. Based on these results, the TIPS bilateral filter ranked best and its CBF maps were scored to have the best overall image quality in 100% of the cases by both observers. Furthermore, quantitative CBF and cerebral blood volume values in both the phantom and the

  13. TIPS bilateral noise reduction in 4D CT perfusion scans produces high-quality cerebral blood flow maps

    Energy Technology Data Exchange (ETDEWEB)

    Mendrik, Adrienne M; Van Ginneken, Bram; Viergever, Max A [Image Sciences Institute, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX Utrecht (Netherlands); Vonken, Evert-jan; De Jong, Hugo W; Riordan, Alan; Van Seeters, Tom; Smit, Ewoud J; Prokop, Mathias, E-mail: a.m.mendrik@gmail.com [Radiology Department, University Medical Center Utrecht, Heidelberglaan 100, 3584 CX Utrecht (Netherlands)

    2011-07-07

    Cerebral computed tomography perfusion (CTP) scans are acquired to detect areas of abnormal perfusion in patients with cerebrovascular diseases. These 4D CTP scans consist of multiple sequential 3D CT scans over time. Therefore, to reduce radiation exposure to the patient, the amount of x-ray radiation that can be used per sequential scan is limited, which results in a high level of noise. To detect areas of abnormal perfusion, perfusion parameters are derived from the CTP data, such as the cerebral blood flow (CBF). Algorithms to determine perfusion parameters, especially singular value decomposition, are very sensitive to noise. Therefore, noise reduction is an important preprocessing step for CTP analysis. In this paper, we propose a time-intensity profile similarity (TIPS) bilateral filter to reduce noise in 4D CTP scans, while preserving the time-intensity profiles (fourth dimension) that are essential for determining the perfusion parameters. The proposed TIPS bilateral filter is compared to standard Gaussian filtering, and 4D and 3D (applied separately to each sequential scan) bilateral filtering on both phantom and patient data. Results on the phantom data show that the TIPS bilateral filter is best able to approach the ground truth (noise-free phantom), compared to the other filtering methods (lowest root mean square error). An observer study is performed using CBF maps derived from fifteen CTP scans of acute stroke patients filtered with standard Gaussian, 3D, 4D and TIPS bilateral filtering. These CBF maps were blindly presented to two observers that indicated which map they preferred for (1) gray/white matter differentiation, (2) detectability of infarcted area and (3) overall image quality. Based on these results, the TIPS bilateral filter ranked best and its CBF maps were scored to have the best overall image quality in 100% of the cases by both observers. Furthermore, quantitative CBF and cerebral blood volume values in both the phantom and the

  14. Electron paramagnetic resonance-based pH mapping using spectral-spatial imaging of sequentially scanned spectra

    OpenAIRE

    Koda, Shunichi; Goodwin, Jonathan; Khramtsov, Valery V.; Fujii, Hirotada; Hirata, Hiroshi

    2012-01-01

    The development of electron paramagnetic resonance (EPR)-based mapping of pH is an important advancement for the field of diagnostic imaging. The ability to accurately quantify pH change in vivo and monitor spatial distribution is desirable for the assessment of a number of pathological conditions in the human body as well as the monitoring of treatment response. In this work we introduce a method for EPR-based pH mapping, utilizing a method of spectral-spatial imaging of sequentially scanned...

  15. Multiple scanning electrochemical microscopy mapping of tyrosinase in micro-contact printed fruit samples on polyvinylidene fluoride membrane

    OpenAIRE

    Lin, Tzu-En; Cortes-Salazar, Fernando; Lesch, Andreas; Qiao, Liang; Bondarenko, Alexandra; Girault, Hubert

    2015-01-01

    Herein, we introduce three orthogonal and compatible methods for detecting tyrosinase, a key factor in fruit browning and skin disorders, with high spatial resolution by means of scanning electrochemical microscopy (SECM). All methods are performed subsequently on the same substrate area providing a wide range of relevant information. The first SECM approach that relies on the mapping of a differential pore oxygen concentration induced by the local hydrophobic changes that the adsorption of t...

  16. Flood hazard mapping by integrating airborne laser scanning data, high resolution images and large scale maps: a case study

    OpenAIRE

    Fernandez, P.; G. Gonçalves; Gomes Pereira, L.; Moreira, M.

    2012-01-01

    The assessment and management of flood risks framework impose the mapping of flood hazard in potential flood risks areas. Floods in urban environments may happen due to rainfall extreme events and be exacerbated by saturated or impervious surfaces. Flood risk is greater in urban areas. (...)

  17. Effect of Functional Chemical Admixtures on the Performance of Cement Asphalt Mortar Used in Ballastless Track

    Institute of Scientific and Technical Information of China (English)

    JIANG Jinyang; SHE Wei; LI Wei; PAN Li

    2015-01-01

    Chemical admixtures are of paramount importance to the performance of modern cement based composites. In this paper, we performed a series of tests to investigate the effects of chemical admixtures on the cement asphalt mortar (CA mortar), i e, compressive strength, frost resistance, permeability, fatigue resistance, pore structure and microstructure. In particular, two types of chemical admixtures were tested,i e, defoamer (tributyl phosphate (TBP)) and polycarboxylate superplasticizer (PS). The results indicate that the addition of TBP and PS eliminates big bubbles and promotes small non-connected pores forming in matrix. Besides, an optimum dosage of TBP and PS may be determined with respect to the frost resistance, permeability and fatigue resistance of CA mortar. Further elaborative discussions are presented as well as experimental evidences from mercury intrusion porosimetry, scanning electron microscopy and energy dispersive spectroscopy.

  18. Effects of GH Admixture on the Early Strength of Fly Ash Concrete and Mortar

    Institute of Scientific and Technical Information of China (English)

    KANG Jingfu; WANG Xiufen

    2008-01-01

    The enhancement effects of GH admixture on the early strengths of fly ash concrete and mortar were studied, and the mechanism was analyzed by X-ray diffraction (XRD) and scanning electro microscope (SEM). Experimental results show that, by the incorporation of GH admixture, both of cement hydration and pozzolanic reaction of fly ash are accelerated, the strengths of fly ash concrete and mortar are enhanced noticeably, especially the early strength. With a mixture design of 200 kg/m3 OPC (Ordinary Portland Cement), 200 kg/m3 fly ash and 50 kg/m3 GH admixture, the strength of concrete at 1 d, 3 d and 28 d reaches 25 Mpa, 50 Mpa and 70 Mpa respectively.

  19. Graph Structure-Based Simultaneous Localization and Mapping Using a Hybrid Method of 2D Laser Scan and Monocular Camera Image in Environments with Laser Scan Ambiguity.

    Science.gov (United States)

    Oh, Taekjun; Lee, Donghwa; Kim, Hyungjin; Myung, Hyun

    2015-07-03

    Localization is an essential issue for robot navigation, allowing the robot to perform tasks autonomously. However, in environments with laser scan ambiguity, such as long corridors, the conventional SLAM (simultaneous localization and mapping) algorithms exploiting a laser scanner may not estimate the robot pose robustly. To resolve this problem, we propose a novel localization approach based on a hybrid method incorporating a 2D laser scanner and a monocular camera in the framework of a graph structure-based SLAM. 3D coordinates of image feature points are acquired through the hybrid method, with the assumption that the wall is normal to the ground and vertically flat. However, this assumption can be relieved, because the subsequent feature matching process rejects the outliers on an inclined or non-flat wall. Through graph optimization with constraints generated by the hybrid method, the final robot pose is estimated. To verify the effectiveness of the proposed method, real experiments were conducted in an indoor environment with a long corridor. The experimental results were compared with those of the conventional GMappingapproach. The results demonstrate that it is possible to localize the robot in environments with laser scan ambiguity in real time, and the performance of the proposed method is superior to that of the conventional approach.

  20. Graph Structure-Based Simultaneous Localization and Mapping Using a Hybrid Method of 2D Laser Scan and Monocular Camera Image in Environments with Laser Scan Ambiguity

    Science.gov (United States)

    Oh, Taekjun; Lee, Donghwa; Kim, Hyungjin; Myung, Hyun

    2015-01-01

    Localization is an essential issue for robot navigation, allowing the robot to perform tasks autonomously. However, in environments with laser scan ambiguity, such as long corridors, the conventional SLAM (simultaneous localization and mapping) algorithms exploiting a laser scanner may not estimate the robot pose robustly. To resolve this problem, we propose a novel localization approach based on a hybrid method incorporating a 2D laser scanner and a monocular camera in the framework of a graph structure-based SLAM. 3D coordinates of image feature points are acquired through the hybrid method, with the assumption that the wall is normal to the ground and vertically flat. However, this assumption can be relieved, because the subsequent feature matching process rejects the outliers on an inclined or non-flat wall. Through graph optimization with constraints generated by the hybrid method, the final robot pose is estimated. To verify the effectiveness of the proposed method, real experiments were conducted in an indoor environment with a long corridor. The experimental results were compared with those of the conventional GMappingapproach. The results demonstrate that it is possible to localize the robot in environments with laser scan ambiguity in real time, and the performance of the proposed method is superior to that of the conventional approach. PMID:26151203

  1. Graph Structure-Based Simultaneous Localization and Mapping Using a Hybrid Method of 2D Laser Scan and Monocular Camera Image in Environments with Laser Scan Ambiguity

    Directory of Open Access Journals (Sweden)

    Taekjun Oh

    2015-07-01

    Full Text Available Localization is an essential issue for robot navigation, allowing the robot to perform tasks autonomously. However, in environments with laser scan ambiguity, such as long corridors, the conventional SLAM (simultaneous localization and mapping algorithms exploiting a laser scanner may not estimate the robot pose robustly. To resolve this problem, we propose a novel localization approach based on a hybrid method incorporating a 2D laser scanner and a monocular camera in the framework of a graph structure-based SLAM. 3D coordinates of image feature points are acquired through the hybrid method, with the assumption that the wall is normal to the ground and vertically flat. However, this assumption can be relieved, because the subsequent feature matching process rejects the outliers on an inclined or non-flat wall. Through graph optimization with constraints generated by the hybrid method, the final robot pose is estimated. To verify the effectiveness of the proposed method, real experiments were conducted in an indoor environment with a long corridor. The experimental results were compared with those of the conventional GMappingapproach. The results demonstrate that it is possible to localize the robot in environments with laser scan ambiguity in real time, and the performance of the proposed method is superior to that of the conventional approach.

  2. 3D chemical mapping: application of scanning transmission (soft) X-ray microscopy (STXM) in combination with angle-scan tomography in bio-, geo-, and environmental sciences.

    Science.gov (United States)

    Obst, Martin; Schmid, Gregor

    2014-01-01

    The identification of environmental processes and mechanisms often requires information on the organochemical and inorganic composition of specimens at high spatial resolution. X-ray spectroscopy (XAS) performed in the soft X-ray range (100-2,200 eV) provides chemical speciation information for elements that are of high biogeochemical relevance such as carbon, nitrogen, and oxygen but also includes transition metals such as iron, manganese, or nickel. Synchrotron-based scanning transmission X-ray microscopy (STXM) combines XAS with high resolution mapping on the 20-nm scale. This provides two-dimensional (2D) quantitative information about the distribution of chemical species such as organic macromolecules, metals, or mineral phases within environmental samples. Furthermore, the combination of STXM with angle-scan tomography allows for three-dimensional (3D) spectromicroscopic analysis of bio-, geo-, or environmental samples. For the acquisition of STXM tomography data, the sample is rotated around an axis perpendicular to the X-ray beam. Various sample preparation approaches such as stripes cut from TEM grids or the preparation of wet cells allow for preparing environmentally relevant specimens in a dry or in a fully hydrated state for 2D and 3D STXM measurements. In this chapter we give a short overview about the principles of STXM, its application to environmental sciences, different preparation techniques, and the analysis and 3D reconstruction of STXM tomography data.

  3. High-field flux mapping of (RE)BCO bulk superconductors-Development of an in situ scanning system

    Energy Technology Data Exchange (ETDEWEB)

    Withnell, T.D. [Superconductivity Group, Cambridge University Engineering Department, Trumpington Street, Cambridge CB2 1PZ (United Kingdom)], E-mail: tdw25@cantab.net; Hari-Babu, N.; Ganney, I.; Dennis, A.; Cardwell, D.A. [Superconductivity Group, Cambridge University Engineering Department, Trumpington Street, Cambridge CB2 1PZ (United Kingdom)

    2008-06-15

    Flux mapping of Y-Ba-Cu-O (YBCO) melt-processed, bulk high-temperature superconductors (HTS) is used to visualise the profile of trapped magnetic field on a magnetised sample and to measure the extent of current flow, and hence field penetration, within the bulk microstructure. Grain structure and defects below the sample surface are observed non-destructively by this technique. This paper outlines the design, development and construction of a novel, in situ Hall scanning system using an 8 T magnet and variable temperature insert (VTI). This system is then used to characterise the field trapping properties of bulk samples for different applied field history.

  4. Low-cost Mobile Laser Scanning and its Feasibility for Environmental Mapping

    OpenAIRE

    Jaakkola, Anttoni

    2015-01-01

    Mobile laser scanning is a measurement technology that combines accurate positioning and attitude information from navigation satellites and inertial sensors with distance measurements from a laser scanner into a point cloud that represents the geometry of the environment surrounding the measurement platform. This geometrical information can be utilized in a variety of applications ranging from 3D city modelling and infrastructure maintenance to forestry and environmental monitoring. In th...

  5. Population Genomics of sub-saharan Drosophila melanogaster: African diversity and non-African admixture.

    Directory of Open Access Journals (Sweden)

    John E Pool

    Full Text Available Drosophila melanogaster has played a pivotal role in the development of modern population genetics. However, many basic questions regarding the demographic and adaptive history of this species remain unresolved. We report the genome sequencing of 139 wild-derived strains of D. melanogaster, representing 22 population samples from the sub-Saharan ancestral range of this species, along with one European population. Most genomes were sequenced above 25X depth from haploid embryos. Results indicated a pervasive influence of non-African admixture in many African populations, motivating the development and application of a novel admixture detection method. Admixture proportions varied among populations, with greater admixture in urban locations. Admixture levels also varied across the genome, with localized peaks and valleys suggestive of a non-neutral introgression process. Genomes from the same location differed starkly in ancestry, suggesting that isolation mechanisms may exist within African populations. After removing putatively admixed genomic segments, the greatest genetic diversity was observed in southern Africa (e.g. Zambia, while diversity in other populations was largely consistent with a geographic expansion from this potentially ancestral region. The European population showed different levels of diversity reduction on each chromosome arm, and some African populations displayed chromosome arm-specific diversity reductions. Inversions in the European sample were associated with strong elevations in diversity across chromosome arms. Genomic scans were conducted to identify loci that may represent targets of positive selection within an African population, between African populations, and between European and African populations. A disproportionate number of candidate selective sweep regions were located near genes with varied roles in gene regulation. Outliers for Europe-Africa F(ST were found to be enriched in genomic regions of locally

  6. Four-point probe electrical resistivity scanning system for large area conductivity and activation energy mapping.

    Science.gov (United States)

    Shimanovich, Klimentiy; Bouhadana, Yaniv; Keller, David A; Rühle, Sven; Anderson, Assaf Y; Zaban, Arie

    2014-05-01

    The electrical properties of metal oxides play a crucial role in the development of new photovoltaic (PV) systems. Here we demonstrate a general approach for the determination and analysis of these properties in thin films of new metal oxide based PV materials. A high throughput electrical scanning system, which facilitates temperature dependent measurements at different atmospheres for highly resistive samples, was designed and constructed. The instrument is capable of determining conductivity and activation energy values for relatively large sample areas, of about 72 × 72 mm(2), with the implementation of geometrical correction factors. The efficiency of our scanning system was tested using two different samples of CuO and commercially available Fluorine doped tin oxide coated glass substrates. Our high throughput tool was able to identify the electrical properties of both resistive metal oxide thin film samples with high precision and accuracy. The scanning system enabled us to gain insight into transport mechanisms with novel compositions and to use those insights to make smart choices when choosing materials for our multilayer thin film all oxide photovoltaic cells.

  7. Mapping Liquid-liquid protein phase separation using ultra-fast-scanning fluorescence correlation spectroscopy

    Science.gov (United States)

    Wei, Ming-Tzo; Elbaum-Garfinkle, Shana; Arnold, Craig B.; Priestley, Rodney D.; Brangwynne, Clifford P.

    Intrinsically disordered proteins (IDPs) are an understudied class of proteins that play important roles in a wide variety of biological processes in cells. We've previously shown that the C. elegans IDP LAF-1 phase separates into P granule-like droplets in vitro. However, the physics of the condensed phase remains poorly understood. Here, we use a novel technique, ultra-fast-scanning fluorescence correlation spectroscopy, to study the nano-scale rheological properties of LAF-1 droplets. Ultra-fast-scanning FCS uses a tunable acoustic gradient index of refraction (TAG) lens with an oil immersion objective to control axial movement of the focal point over a length of several micrometers at frequencies of 70kHz. Using ultra-fast-scanning FCS allows for the accurate determination of molecular concentrations and their diffusion coefficient, when the particle is passing through an excitation volume. Our work reveals an asymmetric LAF-1 phase diagram, and demonstrates that LAF-1 droplets are purely viscous phases which are highly tunable by salt concentration.

  8. A technique on automatic land-use database reconstruction based on scanning land-use map

    Institute of Scientific and Technical Information of China (English)

    LI Xiaojuan; GONG Huili; YIN Lianwang; SUN Yonghua; YANG Lingli; WANG Yanggang

    2006-01-01

    Although a land-cover database is very important to national land use including urban planning and land-use management, it is very laborious and time-consuming to build through digitization of paper land-use maps (1:10000) and data input by hand. Here we propose a new, high-level, automatic technique to build a land-use database, which has proved useful and practical in building a land-use database of Baotou City.

  9. Ultrasound line-by-line scanning method of spatial-temporal active cavitation mapping for high-intensity focused ultrasound.

    Science.gov (United States)

    Ding, Ting; Zhang, Siyuan; Fu, Quanyou; Xu, Zhian; Wan, Mingxi

    2014-01-01

    This paper presented an ultrasound line-by-line scanning method of spatial-temporal active cavitation mapping applicable in a liquid or liquid filled tissue cavities exposed by high-intensity focused ultrasound (HIFU). Scattered signals from cavitation bubbles were obtained in a scan line immediately after one HIFU exposure, and then there was a waiting time of 2 s long enough to make the liquid back to the original state. As this pattern extended, an image was built up by sequentially measuring a series of such lines. The acquisition of the beamformed radiofrequency (RF) signals for a scan line was synchronized with HIFU exposure. The duration of HIFU exposure, as well as the delay of the interrogating pulse relative to the moment while HIFU was turned off, could vary from microseconds to seconds. The feasibility of this method was demonstrated in tap-water and a tap-water filled cavity in the tissue-mimicking gelatin-agar phantom as capable of observing temporal evolutions of cavitation bubble cloud with temporal resolution of several microseconds, lateral and axial resolution of 0.50 mm and 0.29 mm respectively. The dissolution process of cavitation bubble cloud and spatial distribution affected by cavitation previously generated were also investigated. Although the application is limited by the requirement for a gassy fluid (e.g. tap water, etc.) that allows replenishment of nuclei between HIFU exposures, the technique may be a useful tool in spatial-temporal cavitation mapping for HIFU with high precision and resolution, providing a reference for clinical therapy.

  10. Mapping Cd²⁺-induced membrane permeability changes of single live cells by means of scanning electrochemical microscopy.

    Science.gov (United States)

    Filice, Fraser P; Li, Michelle S M; Henderson, Jeffrey D; Ding, Zhifeng

    2016-02-18

    Scanning Electrochemical Microscopy (SECM) is a powerful, non-invasive, analytical methodology that can be used to investigate live cell membrane permeability. Depth scan SECM imaging allowed for the generation of 2D current maps of live cells relative to electrode position in the x-z or y-z plane. Depending on resolution, one depth scan image can contain hundreds of probe approach curves (PACs). Individual PACs were obtained by simply extracting vertical cross-sections from the 2D image. These experimental PACs were overlaid onto theoretically generated PACs simulated at specific geometry conditions. Simulations were carried out using 3D models in COMSOL Multiphysics to determine the cell membrane permeability coefficients at different locations on the surface of the cells. Common in literature, theoretical PACs are generated using a 2D axially symmetric geometry. This saves on both compute time and memory utilization. However, due to symmetry limitations of the model, only one experimental PAC right above the cell can be matched with simulated PAC data. Full 3D models in this article were developed for the SECM system of live cells, allowing all experimental PACs over the entire cell to become usable. Cd(2+)-induced membrane permeability changes of single human bladder (T24) cells were investigated at several positions above the cell, displaced from the central axis. The experimental T24 cells under study were incubated with Cd(2+) in varying concentrations. It is experimentally observed that 50 and 100 μM Cd(2+) caused a decrease in membrane permeability, which was uniform across all locations over the cell regardless of Cd(2+) concentration. The Cd(2+) was found to have detrimental effects on the cell, with cells shrinking in size and volume, and the membrane permeability decreasing. A mapping technique for the analysis of the cell membrane permeability under the Cd(2+) stress is realized by the methodology presented.

  11. Admixture as a tool for finding linked genes and detecting that difference from allelic association between loci.

    Science.gov (United States)

    Chakraborty, R; Weiss, K M

    1988-12-01

    Admixture between genetically different populations may produce gametic association between gene loci as a function of the genetic difference between parental populations and the admixture rate. This association decays as a function of time since admixture and the recombination rate between the loci. Admixture between genetically long-separated human populations has been frequent in the centuries since the age of exploration and colonization, resulting in numerous hybrid descendant populations today, as in the Americas. This represents a natural experiment for genetic epidemiology and anthropology, in which to use polymorphic marker loci (e.g., restriction fragment length polymorphisms) and disequilibrium to infer a genetic basis for traits of interest. In this paper we show that substantial disequilibrium remains today under widely applicable situations, which can be detected without requiring inordinately close linkage between trait and marker loci. Very disparate parental allele frequencies produce large disequilibrium, but the sample size needed to detect such levels of disequilibrium can be large due to the skewed haplotype frequency distribution in the admixed population. Such situations, however, provide power to differentiate between disequilibrium due just to population mixing from that due to physical linkage of loci--i.e., to help map the genetic locus of the trait. A gradient of admixture levels between the same parental populations may be used to test genetic models by relating admixture to disequilibrium levels.

  12. Submolecular Electronic Mapping of Single Cysteine Molecules by in Situ Scanning Tunneling Imaging

    DEFF Research Database (Denmark)

    Zhang, Jingdong; Chi, Qijin; Nazmutdinov, R. R.;

    2009-01-01

    We have used L-Cysteine (Cys) as a model system to study the surface electronic structures of single molecules at the submolecular level in aqueous buffer solution by a combination of electrochemical scanning tunneling microscopy (in situ STM), electrochemistry including voltammetry and chronocou......We have used L-Cysteine (Cys) as a model system to study the surface electronic structures of single molecules at the submolecular level in aqueous buffer solution by a combination of electrochemical scanning tunneling microscopy (in situ STM), electrochemistry including voltammetry...... and tip. The computational images recast as constant-current-height profiles show that the most favorable molecular orientation is the adsorption of cysteine as a radical in zwitterionic form located on the bridge between the Au(I 10) atomic rows and with the amine and carboxyl group toward the solution...... bulk. The correlation between physical location and electronic contrast of the adsorbed molecules was also revealed by the computational data. The present study shows that cysteine packing in the adlayer on Au(110) from the liquid environment is in contrast to that from the ultrahigh-vacuum environment...

  13. Nanoscale magnetic field mapping with a single spin scanning probe magnetometer

    Energy Technology Data Exchange (ETDEWEB)

    Rondin, L.; Tetienne, J.-P.; Spinicelli, P.; Roch, J.-F.; Jacques, V. [Laboratoire de Photonique Quantique et Moleculaire, Ecole Normale Superieure de Cachan and CNRS UMR 8537, 94235 Cachan Cedex (France); Dal Savio, C.; Karrai, K. [Attocube systems AG, Koeniginstrasse 11A RGB, Munich 80539 (Germany); Dantelle, G. [Laboratoire de Physique de la Matiere Condensee, Ecole Polytechnique and CNRS UMR 7643, 91128 Palaiseau (France); Thiaville, A.; Rohart, S. [Laboratoire de Physique des Solides, Universite Paris-Sud and CNRS UMR 8502, 91405 Orsay (France)

    2012-04-09

    We demonstrate quantitative magnetic field mapping with nanoscale resolution, by applying a lock-in technique on the electron spin resonance frequency of a single nitrogen-vacancy defect placed at the apex of an atomic force microscope tip. In addition, we report an all-optical magnetic imaging technique which is sensitive to large off-axis magnetic fields, thus extending the operation range of diamond-based magnetometry. Both techniques are illustrated by using a magnetic hard disk as a test sample. Owing to the non-perturbing and quantitative nature of the magnetic probe, this work should open up numerous perspectives in nanomagnetism and spintronics.

  14. Characterizing configurable transmission modes in plasma photonic crystals using scanning field mapping

    Science.gov (United States)

    Wang, Benjamin; Cappelli, Mark

    2016-10-01

    A fully tunable plasma photonic crystal is used to control the propagation of free space electromagnetic waves in the S to X band of the microwave spectrum. A structured array of discharge plasma tubes are arranged in a square crystal lattice with the individual plasma dielectric constant tuned through variation in the plasma density. Microwave field-mapping is used to characterize the transmitted electromagnetic fields of the tunable device operating in waveguiding and bending modes. These modes are obtained by introducing appropriate line defects in the photonic crystal structure by controlling the activity of individual plasma tubes. Comparisons are made of the measured fields to those simulated using commercially-available software.

  15. Further characterization of theobroma oil-beeswax admixtures as lipid matrices for improved drug delivery systems.

    Science.gov (United States)

    Attama, A A; Schicke, B C; Müller-Goymann, C C

    2006-11-01

    There is an increasing interest in lipid based drug delivery systems due to factors such as better characterization of lipidic excipients and formulation versatility and the choice of different drug delivery systems. It is important to know the thermal characteristics, crystal habit, texture, and appearance of a new lipid matrix when determining its suitability for use in certain pharmaceutical application. It is line with this that this research was embarked upon to characterize mixtures of beeswax and theobroma oil with a view to applying their admixtures in drug delivery systems such as solid lipid nanoparticles and nanostructured lipid carriers. Admixtures of theobroma oil and beeswax were prepared to contain 25% w/w, 50% w/w, and 75% w/w of theobroma oil. The admixtures were analyzed by differential scanning calorimetry (DSC), small angle X-ray diffraction (SAXD), wide angle X-ray diffraction (WAXD), and isothermal heat conduction microcalorimetry (IMC). The melting behavior and microstructures of the lipid admixtures were monitored by polarized light microscopy (PLM). Transmission electron microscopy (TEM) was used to study the internal structures of the lipid bases. DSC traces indicated that the higher melting peaks were roughly constant for the different admixtures, but lower melting peaks significantly increased (p beeswax in all the lipid matrix admixtures at all stages of the study. PLM micrographs revealed differences with regard to the thermal and optical behaviors depending on the composition of the matrix. The lipid matrix consisting of 75% w/w of theobroma oil showed a spherulite texture after 4 weeks of isothermal storage. Crystallization exotherms of lipid matrices containing 50% w/w and 25% w/w of theobroma oil showed change in modification after 30 min with the latter having a greater time-dependent crystallization. Generally, low non-integral Avrami exponents and growth rate constants were obtained for all the lipid matrices, with the admixture

  16. Mapping interfacial chemistry induced variations in protein adsorption with scanning force microscopy.

    Science.gov (United States)

    Ta, T C; McDermott, M T

    2000-06-01

    In this work, we demonstrate the sensitivity of scanning force microscopy (SFM), operated in friction force mode, to adsorbed protein conformation or orientation. We employ patterned films of methyl- and carboxylate-terminated alkanethiolate monolayers on gold as substrates for protein adsorption to observe the effect of each functional group in the same image. Infrared spectroscopic and SFM studies of bovine fibrinogen (BFG) adsorption to single-component monolayers indicate that complete films of BFG that are stable to imaging are formed at each functional group. After adsorption of BFG to a patterned monolayer, we observe a contrast in friction images due to differences in adsorbed BFG conformation or orientation induced by each functional group. We also observe frictional contrast in films of other proteins adsorbed on patterned monolayers. These observations lead to the conclusion that SFM-measured friction is sensitive to adsorbed protein state.

  17. A cost-effective laser scanning method for mapping stream channel geometry and roughness

    Science.gov (United States)

    Lam, Norris; Nathanson, Marcus; Lundgren, Niclas; Rehnström, Robin; Lyon, Steve

    2015-04-01

    In this pilot project, we combine an Arduino Uno and SICK LMS111 outdoor laser ranging camera to acquire high resolution topographic area scans for a stream channel. The microprocessor and imaging system was installed in a custom gondola and suspended from a wire cable system. To demonstrate the systems capabilities for capturing stream channel topography, a small stream (stream channel resulted in a point spacing of 4mm and a point cloud density of 5600 points/m2 for the 5m by 2m area. A grain size distribution of the streambed material was extracted from the point cloud using a moving window, local maxima search algorithm. The median, 84th and 90th percentiles (common metrics to describe channel roughness) of this distribution were found to be within the range of measured values while the largest modelled element was approximately 35% smaller than its measured counterpart. The laser scanning system captured grain sizes between 30mm and 255mm (coarse gravel/pebbles and boulders based on the Wentworth (1922) scale). This demonstrates that our system was capable of resolving both large-scale geometry (e.g. bed slope and stream channel width) and small-scale channel roughness elements (e.g. coarse gravel/pebbles and boulders) for the study area. We further show that the point cloud resolution is suitable for estimating ecohydraulic parameters such as Manning's n and hydraulic radius. Although more work is needed to fine-tune our system's design, these preliminary results are encouraging, specifically for those with a limited operational budget.

  18. State of the water in crosslinked sulfonated poly(ether ether ketone). Two-dimensional differential scanning calorimetry correlation mapping

    Energy Technology Data Exchange (ETDEWEB)

    Al Lafi, Abdul G. [Department of Chemistry, Atomic Energy Commission, Damascus, P.O. Box 6091 (Syrian Arab Republic); Hay, James N., E-mail: cscientific9@aec.org.sy [The School of Metallurgy and Materials, College of Physical Sciences and Engineering, University of Birmingham, Edgbaston, Birmingham B15 2TT (United Kingdom)

    2015-07-20

    Highlights: • 2D-DSC mapping was applied to analyze the heat flow responses of hydrated crosslinked sPEEK. • Two types of loosely bond water were observed. • The first was bond to the sulfonic acid groups and increased with ion exchange capacity. • The second was attributed to the polar groups introduced by ions irradiation and increased with crosslinking degree. • DSC combined with 2D mapping provides a powerful tool for polymer structural determination. - Abstract: This paper reports the first application of two-dimensional differential scanning calorimetry correlation mapping, 2D-DSC-CM to analyze the heat flow responses of sulphonated poly(ether ether ketone), sPEEK, films having different ion exchange capacity and degrees of crosslinks. With the help of high resolution and high sensitivity of 2D-DSC-CM, it was possible to locate two types of loosely bound water within the structure of crosslinked sPEEK. The first was bound to the sulfonic acid groups and dependent on the ion exchange capacity of the sPEEK. The second was bound to other polar groups, either introduced by irradiation with ions and dependent on the crosslinking degree or present in the polymer such as the carbonyl groups or terminal units. The results suggest that the ability of the sulfonic acid groups in the crosslinked sPEEK membranes to adsorb water molecules is increased by crosslinking, probably due to the better close packing efficiency of the crosslinked samples. DSC combined with 2D correlation mapping provides a fast and powerful tool for polymer structural determination.

  19. Generating an optimal DTM from airborne laser scanning data for landslide mapping in a tropical forest environment

    Science.gov (United States)

    Razak, Khamarrul Azahari; Santangelo, Michele; Van Westen, Cees J.; Straatsma, Menno W.; de Jong, Steven M.

    2013-05-01

    Landslide inventory maps are fundamental for assessing landslide susceptibility, hazard, and risk. In tropical mountainous environments, mapping landslides is difficult as rapid and dense vegetation growth obscures landslides soon after their occurrence. Airborne laser scanning (ALS) data have been used to construct the digital terrain model (DTM) under dense vegetation, but its reliability for landslide recognition in the tropics remains surprisingly unknown. This study evaluates the suitability of ALS for generating an optimal DTM for mapping landslides in the Cameron Highlands, Malaysia. For the bare-earth extraction, we used hierarchical robust filtering algorithm and a parameterization with three sequential filtering steps. After each filtering step, four interpolations techniques were applied, namely: (i) the linear prediction derived from the SCOP++ (SCP), (ii) the inverse distance weighting (IDW), (iii) the natural neighbor (NEN) and (iv) the topo-to-raster (T2R). We assessed the quality of 12 DTMs in two ways: (1) with respect to 448 field-measured terrain heights and (2) based on the interpretability of landslides. The lowest root-mean-square error (RMSE) was 0.89 m across the landscape using three filtering steps and linear prediction as interpolation method. However, we found that a less stringent DTM filtering unveiled more diagnostic micro-morphological features, but also retained some of vegetation. Hence, a combination of filtering steps is required for optimal landslide interpretation, especially in forested mountainous areas. IDW was favored as the interpolation technique because it combined computational times more reasonably without adding artifacts to the DTM than T2R and NEN, which performed relatively well in the first and second filtering steps, respectively. The laser point density and the resulting ground point density after filtering are key parameters for producing a DTM applicable to landslide identification. The results showed that the

  20. Early hydration cement Effect of admixtures superplasticizers

    Directory of Open Access Journals (Sweden)

    Puertas, F.

    2001-06-01

    Full Text Available Early hydration of portland cement with superplasticizer admixtures of different nature has been studied. These admixtures were: one based on melamine synthetic, other based on vinyl copolymer and other based on polyacrylate copolymers. The dosage of the formers were constant (1% weigth of cement and for the third, the influence of admixture dosage was also evaluated, giving dosage values among 1-0.3%. The pastes obtained were studied by conduction calorimetry, XRD and FTIR. Also the apparent fluidity was determined by "Minislump" test. The main results obtained were: a superplasticizers admixtures used, regardless of their nature and for the polycarboxilate one the dosage, retard the silicate hydration (specially, alite phase, b The ettringite formation is affected by the nature of the admixture. cA relationship between the dosage of admixture based on polycarboxilates and the time at the acceleration has been established. A lineal relation (y = 11.03 + 16.05x was obtained. From these results is possible to know, in function of dosage admixture, the time when the masive hydration products and the setting times are produced. Also the total heat releases in these reactions is independent of the nature and dosage of admixture, saying that in all cases the reactions are the same.

    En el presente trabajo se ha estudiado la hidratación inicial de un cemento portland aditivado con superplastificantes de diferente naturaleza. Dichos aditivos fueron: uno basado en melaminas sintéticas, otro en copolímeros vinilicos y otro en policarboxilatos. La dosificación de los dos primeros se fijó constante en 1% en peso con relación al cemento, mientras que para el tercero se evaluó, también, la influencia de la dosificación, tomando proporciones desde el 1% hasta el 0,3%. Las pastas obtenidas se estudiaron por: calorimetría de conducción, DRX y FTIR. También se determinó la fluidez de la pasta a través del ensayo del "Minislump ". Los

  1. A Genome Scan for Modifiers of Age at Onset in Huntington Disease: The HD MAPS Study

    Science.gov (United States)

    Li, Jian-Liang; Hayden, Michael R.; Almqvist, Elisabeth W.; Brinkman, Ryan R.; Durr, Alexandra; Dodé, Catherine; Morrison, Patrick J.; Suchowersky, Oksana; Ross, Christopher A.; Margolis, Russell L.; Rosenblatt, Adam; Gómez-Tortosa, Estrella; Cabrero, David Mayo; Novelletto, Andrea; Frontali, Marina; Nance, Martha; Trent, Ronald J. A.; McCusker, Elizabeth; Jones, Randi; Paulsen, Jane S.; Harrison, Madeline; Zanko, Andrea; Abramson, Ruth K.; Russ, Ana L.; Knowlton, Beth; Djoussé, Luc; Mysore, Jayalakshmi S.; Tariot, Suzanne; Gusella, Michael F.; Wheeler, Vanessa C.; Atwood, Larry D.; Cupples, L. Adrienne; Saint-Hilaire, Marie; Cha, Jang-Ho J.; Hersch, Steven M.; Koroshetz, Walter J.; Gusella, James F.; MacDonald, Marcy E.; Myers, Richard H.

    2003-01-01

    Huntington disease (HD) is caused by the expansion of a CAG repeat within the coding region of a novel gene on 4p16.3. Although the variation in age at onset is partly explained by the size of the expanded repeat, the unexplained variation in age at onset is strongly heritable (h2=0.56), which suggests that other genes modify the age at onset of HD. To identify these modifier loci, we performed a 10-cM density genomewide scan in 629 affected sibling pairs (295 pedigrees and 695 individuals), using ages at onset adjusted for the expanded and normal CAG repeat sizes. Because all those studied were HD affected, estimates of allele sharing identical by descent at and around the HD locus were adjusted by a positionally weighted method to correct for the increased allele sharing at 4p. Suggestive evidence for linkage was found at 4p16 (LOD=1.93), 6p21–23 (LOD=2.29), and 6q24–26 (LOD=2.28), which may be useful for investigation of genes that modify age at onset of HD. PMID:12900792

  2. Scanning, Multibeam, Single Photon Lidars for Rapid, Large Scale, High Resolution, Topographic and Bathymetric Mapping

    Directory of Open Access Journals (Sweden)

    John J. Degnan

    2016-11-01

    Full Text Available Several scanning, single photon sensitive, 3D imaging lidars are herein described that operate at aircraft above ground levels (AGLs between 1 and 11 km, and speeds in excess of 200 knots. With 100 beamlets and laser fire rates up to 60 kHz, we, at the Sigma Space Corporation (Lanham, MD, USA, have interrogated up to 6 million ground pixels per second, all of which can record multiple returns from volumetric scatterers such as tree canopies. High range resolution has been achieved through the use of subnanosecond laser pulsewidths, detectors and timing receivers. The systems are presently being deployed on a variety of aircraft to demonstrate their utility in multiple applications including large scale surveying, bathymetry, forestry, etc. Efficient noise filters, suitable for near realtime imaging, have been shown to effectively eliminate the solar background during daytime operations. Geolocation elevation errors measured to date are at the subdecimeter level. Key differences between our Single Photon Lidars, and competing Geiger Mode lidars are also discussed.

  3. Stroboscobic near-field scanning optical microscopy for 3D mapping of mode profiles of plasmonic nanostructures (Conference Presentation)

    Science.gov (United States)

    Dana, Aykutlu; Ozgur, Erol; Torunoglu, Gamze

    2016-09-01

    We present a dynamic approach to scanning near field optical microscopy that extends the measurement technique to the third dimension, by strobing the illumination in sync with the cantilever oscillation. Nitrogen vacancy (NV) centers in nanodiamonds placed on cantilever tips are used as stable emitters for emission enhancement. Local field enhancement and modulation of optical density states are mapped in three dimensions based on fluorescence intensity and spectrum changes as the tip is scanned over plasmonic nanostructures. The excitation of NV centers is done using a total internal reflection setup. Using a digital phase locked loop to pulse the excitation in various tip sample separations, 2D slices of fluorescence enhancement can be recorded. Alternatively, a conventional SNOM tip can be used to selectively couple wideband excitation to the collection path, with subdiffraction resolution of 60 nm in x and y and 10 nm in z directions. The approach solves the problem of tip-sample separation stabilization over extended periods of measurement time, required to collect data resolved in emission wavelength and three spatial dimensions. The method can provide a unique way of accessing the three dimensional field and mode profiles of nanophotonics structures.

  4. Stochastic gradient boosting classification trees for forest fuel types mapping through airborne laser scanning and IRS LISS-III imagery

    Science.gov (United States)

    Chirici, G.; Scotti, R.; Montaghi, A.; Barbati, A.; Cartisano, R.; Lopez, G.; Marchetti, M.; McRoberts, R. E.; Olsson, H.; Corona, P.

    2013-12-01

    This paper presents an application of Airborne Laser Scanning (ALS) data in conjunction with an IRS LISS-III image for mapping forest fuel types. For two study areas of 165 km2 and 487 km2 in Sicily (Italy), 16,761 plots of size 30-m × 30-m were distributed using a tessellation-based stratified sampling scheme. ALS metrics and spectral signatures from IRS extracted for each plot were used as predictors to classify forest fuel types observed and identified by photointerpretation and fieldwork. Following use of traditional parametric methods that produced unsatisfactory results, three non-parametric classification approaches were tested: (i) classification and regression tree (CART), (ii) the CART bagging method called Random Forests, and (iii) the CART bagging/boosting stochastic gradient boosting (SGB) approach. This contribution summarizes previous experiences using ALS data for estimating forest variables useful for fire management in general and for fuel type mapping, in particular. It summarizes characteristics of classification and regression trees, presents the pre-processing operation, the classification algorithms, and the achieved results. The results demonstrated superiority of the SGB method with overall accuracy of 84%. The most relevant ALS metric was canopy cover, defined as the percent of non-ground returns. Other relevant metrics included the spectral information from IRS and several other ALS metrics such as percentiles of the height distribution, the mean height of all returns, and the number of returns.

  5. Genomic Scans of Zygotic Disequilibrium and Epistatic SNPs in HapMap Phase III Populations.

    Directory of Open Access Journals (Sweden)

    Xin-Sheng Hu

    Full Text Available Previous theory indicates that zygotic linkage disequilibrium (LD is more informative than gametic or composite digenic LD in revealing natural population history. Further, the difference between the composite digenic and maximum zygotic LDs can be used to detect epistatic selection for fitness. Here we corroborate the theory by investigating genome-wide zygotic LDs in HapMap phase III human populations. Results show that non-Africa populations have much more significant zygotic LDs than do Africa populations. Africa populations (ASW, LWK, MKK, and YRI possess more significant zygotic LDs for the double-homozygotes (DAABB than any other significant zygotic LDs (DAABb, DAaBB, and DAaBb, while non-Africa populations generally have more significant DAaBb's than any other significant zygotic LDs (DAABB, DAABb, and DAaBB. Average r-squares for any significant zygotic LDs increase generally in an order of populations YRI, MKK, CEU, CHB, LWK, JPT, CHD, TSI, GIH, ASW, and MEX. Average r-squares are greater for DAABB and DAaBb than for DAaBB and DAABb in each population. YRI and MKK can be separated from LWK and ASW in terms of the pattern of average r-squares. All population divergences in zygotic LDs can be interpreted with the model of Out of Africa for modern human origins. We have also detected 19735-95921 SNP pairs exhibiting strong signals of epistatic selection in different populations. Gene-gene interactions for some epistatic SNP pairs are evident from empirical findings, but many more epistatic SNP pairs await evidence. Common epistatic SNP pairs rarely exist among all populations, but exist in distinct regions (Africa, Europe, and East Asia, which helps to understand geographical genomic medicine.

  6. Turbulent diffusion of chemically reacting gaseous admixtures

    Science.gov (United States)

    Elperin, T.; Kleeorin, N.; Liberman, M.; Rogachevskii, I.

    2014-11-01

    We study turbulent diffusion of chemically reacting gaseous admixtures in a developed turbulence. In our previous study [Phys. Rev. Lett. 80, 69 (1998), 10.1103/PhysRevLett.80.69] using a path-integral approach for a delta-correlated in a time random velocity field, we demonstrated a strong modification of turbulent transport in fluid flows with chemical reactions or phase transitions. In the present study we use the spectral τ approximation that is valid for large Reynolds and Peclet numbers and show that turbulent diffusion of the reacting species can be strongly depleted by a large factor that is the ratio of turbulent and chemical times (turbulent Damköhler number). We have demonstrated that the derived theoretical dependence of a turbulent diffusion coefficient versus the turbulent Damköhler number is in good agreement with that obtained previously in the numerical modeling of a reactive front propagating in a turbulent flow and described by the Kolmogorov-Petrovskii-Piskunov-Fisher equation. We have found that turbulent cross-effects, e.g., turbulent mutual diffusion of gaseous admixtures and turbulent Dufour effect of the chemically reacting gaseous admixtures, are less sensitive to the values of stoichiometric coefficients. The mechanisms of the turbulent cross-effects differ from the molecular cross-effects known in irreversible thermodynamics. In a fully developed turbulence and at large Peclet numbers the turbulent cross-effects are much larger than the molecular ones. The obtained results are applicable also to heterogeneous phase transitions.

  7. Mapping Land Cover in the Taita Hills, se Kenya, Using Airborne Laser Scanning and Imaging Spectroscopy Data Fusion

    Science.gov (United States)

    Piiroinen, R.; Heiskanen, J.; Maeda, E.; Hurskainen, P.; Hietanen, J.; Pellikka, P.

    2015-04-01

    The Taita Hills, located in south-eastern Kenya, is one of the world's biodiversity hotspots. Despite the recognized ecological importance of this region, the landscape has been heavily fragmented due to hundreds of years of human activity. Most of the natural vegetation has been converted for agroforestry, croplands and exotic forest plantations, resulting in a very heterogeneous landscape. Given this complex agro-ecological context, characterizing land cover using traditional remote sensing methods is extremely challenging. The objective of this study was to map land cover in a selected area of the Taita Hills using data fusion of airborne laser scanning (ALS) and imaging spectroscopy (IS) data. Land Cover Classification System (LCCS) was used to derive land cover nomenclature, while the height and percentage cover classifiers were used to create objective definitions for the classes. Simultaneous ALS and IS data were acquired over a 10 km x 10 km area in February 2013 of which 1 km x 8 km test site was selected. The ALS data had mean pulse density of 9.6 pulses/m2, while the IS data had spatial resolution of 1 m and spectral resolution of 4.5-5 nm in the 400-1000 nm spectral range. Both IS and ALS data were geometrically co-registered and IS data processed to at-surface reflectance. While IS data is suitable for determining land cover types based on their spectral properties, the advantage of ALS data is the derivation of vegetation structural parameters, such as tree height and crown cover, which are crucial in the LCCS nomenclature. Geographic object-based image analysis (GEOBIA) was used for segmentation and classification at two scales. The benefits of GEOBIA and ALS/IS data fusion for characterizing heterogeneous landscape were assessed, and ALS and IS data were considered complementary. GEOBIA was found useful in implementing the LCCS based classification, which would be difficult to map using pixel-based methods.

  8. Shrinkage and cracking behavior of high performance concretes containing chemical admixtures

    Institute of Scientific and Technical Information of China (English)

    亓萌; 李宗津; 马保国

    2002-01-01

    Modern concretes often incorporate several chemical admixtures to alter the properties of fresh or hardened concrete. In this work, the influences of three types of chemical admixtures, calcium nitrite inhibitor (CNI), retarder (D-17) and superplasticizer (W-19) on free shrinkage and restrained shrinkage cracking of high performance concrete were experimentally investigated. The test results showed that, with the same water to binder ratio (0.4), mixtures containing D-17 of 0.25 percent or higher ratio of W-19 (2.76 percent) all exhibited a reduction in free shrinkage and shrinkage cracking width. However, the incorporations of various ratios of CNI into mixtures led to an increase in free shrinkage and shrinkage cracking width as compared to control mixture. In order to study the influence of CNI, the microstructure of concrete mixture containing CNI were investigated by Mercury Intrusion Porosimetry as well as Scanning Electronic Microscopy(SEM) technique.

  9. The band excitation method in scanning probe microscopy for rapid mapping of energy dissipation on the nanoscale

    Energy Technology Data Exchange (ETDEWEB)

    Jesse, Stephen [Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 (United States); Kalinin, Sergei V [Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 (United States); Proksch, Roger [Asylum Research, 6310 Hollister Avenue, Santa Barbara, CA 93117 (United States); Baddorf, A P [Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 (United States); Rodriguez, B J [Materials Science and Technology Division, Oak Ridge National Laboratory, Oak Ridge, TN 37831 (United States)

    2007-10-31

    Mapping energy transformation pathways and dissipation on the nanoscale and understanding the role of local structure in dissipative behavior is a key challenge for imaging in areas ranging from electronics and information technologies to efficient energy production. Here we develop a family of novel scanning probe microscopy (SPM) techniques in which the cantilever is excited and the response is recorded over a band of frequencies simultaneously, rather than at a single frequency as in conventional SPMs. This band excitation (BE) SPM allows very rapid acquisition of the full frequency response at each point (i.e. transfer function) in an image and in particular enables the direct measurement of energy dissipation through the determination of the Q-factor of the cantilever-sample system. The BE method is demonstrated for force-distance and voltage spectroscopies and for magnetic dissipation imaging with sensitivity close to the thermomechanical limit. The applicability of BE for various SPMs is analyzed, and the method is expected to be universally applicable to ambient and liquid SPMs.

  10. Informativeness of the CODIS STR loci for admixture analysis.

    Science.gov (United States)

    Barnholtz-Sloan, Jill S; Pfaff, Carrie L; Chakraborty, Ranajit; Long, Jeffrey C

    2005-11-01

    Population admixture (or ancestry) is used as an approach to gene discovery in complex diseases, particularly when the disease prevalence varies widely across geographic populations. Admixture analysis could be useful for forensics because an indication of a perpetrator's ancestry would narrow the pool of suspects for a particular crime. The purpose of this study was to use Fisher's information to identify informative sets of markers for admixture analysis. Using published founding population allele frequencies we test three marker sets for efficacy for estimating admixture: the FBI CODIS Core STR loci, the HGDP-CEPH Human Genome Diversity Cell Line Panel and the set of 39 ancestry informative SNPS from the Shriver lab at Pennsylvania State University. We conclude that the FBI CODIS Core STR set is valid for admixture analysis, but not the most precise. We recommend using a combination of the most informative markers from the HGDP-CEPH and Shriver loci sets.

  11. Mapping tree health using airborne laser scans and hyperspectral imagery: a case study for a floodplain eucalypt forest

    Science.gov (United States)

    Shendryk, Iurii; Tulbure, Mirela; Broich, Mark; McGrath, Andrew; Alexandrov, Sergey; Keith, David

    2016-04-01

    Airborne laser scanning (ALS) and hyperspectral imaging (HSI) are two complementary remote sensing technologies that provide comprehensive structural and spectral characteristics of forests over large areas. In this study we developed two algorithms: one for individual tree delineation utilizing ALS and the other utilizing ALS and HSI to characterize health of delineated trees in a structurally complex floodplain eucalypt forest. We conducted experiments in the largest eucalypt, river red gum forest in the world, located in the south-east of Australia that experienced severe dieback over the past six decades. For detection of individual trees from ALS we developed a novel bottom-up approach based on Euclidean distance clustering to detect tree trunks and random walks segmentation to further delineate tree crowns. Overall, our algorithm was able to detect 67% of tree trunks with diameter larger than 13 cm. We assessed the accuracy of tree delineations in terms of crown height and width, with correct delineation of 68% of tree crowns. The increase in ALS point density from ~12 to ~24 points/m2 resulted in tree trunk detection and crown delineation increase of 11% and 13%, respectively. Trees with incorrectly delineated crowns were generally attributed to areas with high tree density along water courses. The accurate delineation of trees allowed us to classify the health of this forest using machine learning and field-measured tree crown dieback and transparency ratios, which were good predictors of tree health in this forest. ALS and HSI derived indices were used as predictor variables to train and test object-oriented random forest classifier. Returned pulse width, intensity and density related ALS indices were the most important predictors in the tree health classifications. At the forest level in terms of tree crown dieback, 77% of trees were classified as healthy, 14% as declining and 9% as dying or dead with 81% mapping accuracy. Similarly, in terms of tree

  12. TIPS bilateral noise reduction in 4D CT perfusion scans produces high-quality cerebral blood flow maps

    NARCIS (Netherlands)

    Mendrik, A.M.; Vonken, E.J.; Ginneken, B. van; Jong, H.W. de; Riordan, A.; Seeters, T. van; Smit, E.J.; Viergever, M.A.; Prokop, M.

    2011-01-01

    Cerebral computed tomography perfusion (CTP) scans are acquired to detect areas of abnormal perfusion in patients with cerebrovascular diseases. These 4D CTP scans consist of multiple sequential 3D CT scans over time. Therefore, to reduce radiation exposure to the patient, the amount of x-ray radiat

  13. TIPS bilateral noise reduction in 4D CT perfusion scans produces high-quality cerebral blood flow maps

    NARCIS (Netherlands)

    A. Mendrik (Adrienne); E.J.P.A. Vonken; B.T.J. van Ginneken (Berbke); J.R. Riordan (John ); H.W.A.M. de Jong (Hugo); T. van Seeters (Tom); E.J. Smit (Ewoud); M.A. Viergever (Max); M. Prokop (Mathias)

    2011-01-01

    textabstractCerebral computed tomography perfusion (CTP) scans are acquired to detect areas of abnormal perfusion in patients with cerebrovascular diseases. These 4D CTP scans consist of multiple sequential 3D CT scans over time. Therefore, to reduce radiation exposure to the patient, the amount of

  14. Performance of alusilica as mineral admixture in cementitious systems

    DEFF Research Database (Denmark)

    Chi, Lin; Jensen, Ole Mejlhede

    The aim of this project is to study the effect of alusilica (ALS) as a mineral admixture on the fresh properties and development of mechanical properties of cementitious systems. ALS consists of relatively pure, amorphous silicium-dioxide – a chemical compound which is known to be useful as mineral...... to the total binder mass (cement+ALS). The water/binder-ratio (w/b) is 0.5 for all mixtures. The produced ALS-substituted powder was studied by scanning electron microscopy (SEM) and Energy Dispersive X-ray Analysis (EDAX) to investigate if the ALS agglomerates in the raw material were broken by the grinding...... procedure. On the fresh mortar air content was measured by the pressure method, ASTM C231/C231M-14 and the flow was measured by ASTM C1437-13. Casting was done in standard mortar molds 4×4×16 cm3. After demolding, each mortar specimen was weighed over and under water to evaluate their homogeneity and air...

  15. A New Approach for Realistic 3D Reconstruction of Planar Surfaces from Laser Scanning Data and Imagery Collected Onboard Modern Low-Cost Aerial Mapping Systems

    Directory of Open Access Journals (Sweden)

    Zahra Lari

    2017-02-01

    Full Text Available Over the past few years, accurate 3D surface reconstruction using remotely-sensed data has been recognized as a prerequisite for different mapping, modelling, and monitoring applications. To fulfill the needs of these applications, necessary data are generally collected using various digital imaging systems. Among them, laser scanners have been acknowledged as a fast, accurate, and flexible technology for the acquisition of high density 3D spatial data. Despite their quick accessibility, the acquired 3D data using these systems does not provide semantic information about the nature of scanned surfaces. Hence, reliable processing techniques are employed to extract the required information for 3D surface reconstruction. Moreover, the extracted information from laser scanning data cannot be effectively utilized due to the lack of descriptive details. In order to provide a more realistic and accurate perception of the scanned scenes using laser scanning systems, a new approach for 3D reconstruction of planar surfaces is introduced in this paper. This approach aims to improve the interpretability of the extracted planar surfaces from laser scanning data using spectral information from overlapping imagery collected onboard modern low-cost aerial mapping systems, which are widely adopted nowadays. In this approach, the scanned planar surfaces using laser scanning systems are initially extracted through a novel segmentation procedure, and then textured using the acquired overlapping imagery. The implemented texturing technique, which intends to overcome the computational inefficiency of the previously-developed 3D reconstruction techniques, is performed in three steps. In the first step, the visibility of the extracted planar surfaces from laser scanning data within the collected images is investigated and a list of appropriate images for texturing each surface is established. Successively, an occlusion detection procedure is carried out to identify the

  16. Behavior of passive admixture in a vortical hydrodynamic field

    Directory of Open Access Journals (Sweden)

    R.O.Bobrov

    2006-01-01

    Full Text Available The motion of passive admixture of spherical particles in the stationary hydrodynamic field of a swirling flow is studied. A spherical particle of a given mass in the hydrodynamic field of a swirling flow is located on a certain circular orbit, where the centrifugal force is compensated by the radial drag force due to the sink. This leads to the separation of the host fluid and admixture. A theory of Brownian motion of admixture in dilute solutions with a non-uniform flow is constructed.

  17. 视线鼠标在电子地图浏览中的应用%The application of sight mouse in map scanning

    Institute of Scientific and Technical Information of China (English)

    吕佩育; 张春森; 王延亮; 吕静凡

    2012-01-01

    电子地图越来越多地进入人们的生活,但肢体残疾人士很难使用鼠标浏览电子地图.另外,公共场所用触摸屏操作电子地图存在卫生问题.因此,使用非接触的人机交互方式浏览地图成为需要解决的问题.近年来,人机交互中视线跟踪技术的发展,为问题的解决提供了可能.通过用视线鼠标浏览电子地图的实验,设计基于视线鼠标的地图浏览工具,成功实现非接触方式浏览电子地图的目标.%Electronic map comes into our life gradually. However, it is difficult for body disabled people to browse electronic map using mouse. In addition, there is a sanitation problem on using electronic map with touch screen in public. Therefore, it becomes a problem to browse map using human-computer interaction with non-contact way. In recent years, it is possible to solve the problem with the development of sight tracking technology in human-computer interaction. The author performs an experiment of electronic map scanning with sight mouse, and designs a map scanning tool based on sight mouse. Finally, the author realizes the goal of browsing electronic map with non-contact way.

  18. Dense packing properties of mineral admixtures in cementitious material

    Institute of Scientific and Technical Information of China (English)

    Yanzhou Peng; Shuguang Hu; Qingjun Ding

    2009-01-01

    The effect of ultra-fine fly ash (UFFA), steel slag (SS) and silica fume (SF) on packing density of binary, ternary and quaternary cementitious materials was studied in this paper in terms of minimum water requirement of cement. The influence of mineral admixtures on the relative density of pastes with low water/binder ratios was analyzed and the relationship between paste density and compressive strength of the corresponding hardened mortars was discussed. The results indicate that the incorporation of mineral admixtures can effectively improve the packing density of cementitious materials; the increase in packing density of a composite with incorporation of two or three kinds of mineral admixtures is even more obvious than that with only one mineral admixture. Moreover, an optimal amount of mineral admixture imparts to the mixture maximum packing density. The dense packing effect of a mineral admixture can increase the packing density of the resulting cementitious material and also the density of paste with low water/binder ratio, which evidently enhances the compressive strength of the hardened mortar.

  19. SU-E-J-113: Effects of Deformable Registration On First-Order Texture Maps Calculated From Thoracic Lung CT Scans

    Energy Technology Data Exchange (ETDEWEB)

    Smith, C; Cunliffe, A; Al-Hallaq, H; Armato, S [The University of Chicago, Chicago, IL (United States)

    2015-06-15

    Purpose: To determine the stability of eight first-order texture features following the deformable registration of serial computed tomography (CT) scans. Methods: CT scans at two different time points from 10 patients deemed to have no lung abnormalities by a radiologist were collected. Following lung segmentation using an in-house program, texture maps were calculated from 32×32-pixel regions of interest centered at every pixel in the lungs. The texture feature value of the ROI was assigned to the center pixel of the ROI in the corresponding location of the texture map. Pixels in the square ROI not contained within the segmented lung were not included in the calculation. To quantify the agreement between ROI texture features in corresponding pixels of the baseline and follow-up texture maps, the Fraunhofer MEVIS EMPIRE10 deformable registration algorithm was used to register the baseline and follow-up scans. Bland-Altman analysis was used to compare registered scan pairs by computing normalized bias (nBias), defined as the feature value change normalized to the mean feature value, and normalized range of agreement (nRoA), defined as the range spanned by the 95% limits of agreement normalized to the mean feature value. Results: Each patient’s scans contained between 6.8–15.4 million ROIs. All of the first-order features investigated were found to have an nBias value less than 0.04% and an nRoA less than 19%, indicating that the variability introduced by deformable registration was low. Conclusion: The eight first-order features investigated were found to be registration stable. Changes in CT texture maps could allow for temporal-spatial evaluation of the evolution of lung abnormalities relating to a variety of diseases on a patient-by-patient basis. SGA and HA receives royalties and licensing fees through the University of Chicago for computer-aided diagnosis technology. Research reported in this publication was supported by the National Institute Of General

  20. Scanning the landscape of genome architecture of non-O1 and non-O139 Vibrio cholerae by whole genome mapping reveals extensive population genetic diversity.

    Science.gov (United States)

    Chapman, Carol; Henry, Matthew; Bishop-Lilly, Kimberly A; Awosika, Joy; Briska, Adam; Ptashkin, Ryan N; Wagner, Trevor; Rajanna, Chythanya; Tsang, Hsinyi; Johnson, Shannon L; Mokashi, Vishwesh P; Chain, Patrick S G; Sozhamannan, Shanmuga

    2015-01-01

    Historically, cholera outbreaks have been linked to V. cholerae O1 serogroup strains or its derivatives of the O37 and O139 serogroups. A genomic study on the 2010 Haiti cholera outbreak strains highlighted the putative role of non O1/non-O139 V. cholerae in causing cholera and the lack of genomic sequences of such strains from around the world. Here we address these gaps by scanning a global collection of V. cholerae strains as a first step towards understanding the population genetic diversity and epidemic potential of non O1/non-O139 strains. Whole Genome Mapping (Optical Mapping) based bar coding produces a high resolution, ordered restriction map, depicting a complete view of the unique chromosomal architecture of an organism. To assess the genomic diversity of non-O1/non-O139 V. cholerae, we applied a Whole Genome Mapping strategy on a well-defined and geographically and temporally diverse strain collection, the Sakazaki serogroup type strains. Whole Genome Map data on 91 of the 206 serogroup type strains support the hypothesis that V. cholerae has an unprecedented genetic and genomic structural diversity. Interestingly, we discovered chromosomal fusions in two unusual strains that possess a single chromosome instead of the two chromosomes usually found in V. cholerae. We also found pervasive chromosomal rearrangements such as duplications and indels in many strains. The majority of Vibrio genome sequences currently in public databases are unfinished draft sequences. The Whole Genome Mapping approach presented here enables rapid screening of large strain collections to capture genomic complexities that would not have been otherwise revealed by unfinished draft genome sequencing and thus aids in assembling and finishing draft sequences of complex genomes. Furthermore, Whole Genome Mapping allows for prediction of novel V. cholerae non-O1/non-O139 strains that may have the potential to cause future cholera outbreaks.

  1. Worldwide patterns of ancestry, divergence, and admixture in domesticated cattle.

    Directory of Open Access Journals (Sweden)

    Jared E Decker

    2014-03-01

    Full Text Available The domestication and development of cattle has considerably impacted human societies, but the histories of cattle breeds and populations have been poorly understood especially for African, Asian, and American breeds. Using genotypes from 43,043 autosomal single nucleotide polymorphism markers scored in 1,543 animals, we evaluate the population structure of 134 domesticated bovid breeds. Regardless of the analytical method or sample subset, the three major groups of Asian indicine, Eurasian taurine, and African taurine were consistently observed. Patterns of geographic dispersal resulting from co-migration with humans and exportation are recognizable in phylogenetic networks. All analytical methods reveal patterns of hybridization which occurred after divergence. Using 19 breeds, we map the cline of indicine introgression into Africa. We infer that African taurine possess a large portion of wild African auroch ancestry, causing their divergence from Eurasian taurine. We detect exportation patterns in Asia and identify a cline of Eurasian taurine/indicine hybridization in Asia. We also identify the influence of species other than Bos taurus taurus and B. t. indicus in the formation of Asian breeds. We detect the pronounced influence of Shorthorn cattle in the formation of European breeds. Iberian and Italian cattle possess introgression from African taurine. American Criollo cattle originate from Iberia, and not directly from Africa with African ancestry inherited via Iberian ancestors. Indicine introgression into American cattle occurred in the Americas, and not Europe. We argue that cattle migration, movement and trading followed by admixture have been important forces in shaping modern bovine genomic variation.

  2. Using side-scan sonar to characterize and map physical habitat and anthropogenic underwater features in the St. Louis River.

    Science.gov (United States)

    Characterizing underwater habitat and other features is difficult and costly, especially in the large St. Louis River Estuary. We are using side-scan sonar (SSS), first developed in the 1960s to remotely sense underwater habitat features from reflected acoustic signals (backscatt...

  3. Mapping an on-chip terahertz antenna by a scanning near-field probe and a fixed field-effect transistor

    Institute of Scientific and Technical Information of China (English)

    吕利; 孙建东; RogerA.Lewis; 孙云飞; 吴东岷; 蔡勇; 秦华

    2015-01-01

    In the terahertz (THz) regime, the active region for a solid-state detector usually needs to be implemented accurately in the near-field region of an on-chip antenna. Mapping of the near-field strength could allow for rapid verification and optimization of new antenna/detector designs. Here, we report a proof-of-concept experiment in which the field mapping is realized by a scanning metallic probe and a fixed AlGaN/GaN field-effect transistor. Experiment results agree well with the electromagnetic-wave simulations. The results also suggest a field-effect THz detector combined with a probe tip could serve as a high sensitivity THz near-field sensor.

  4. Variation in genetic admixture and population structure among Latinos: the Los Angeles Latino eye study (LALES

    Directory of Open Access Journals (Sweden)

    Le Marchand Loic

    2009-11-01

    Full Text Available Abstract Background Population structure and admixture have strong confounding effects on genetic association studies. Discordant frequencies for age-related macular degeneration (AMD risk alleles and for AMD incidence and prevalence rates are reported across different ethnic groups. We examined the genomic ancestry characterizing 538 Latinos drawn from the Los Angeles Latino Eye Study [LALES] as part of an ongoing AMD-association study. To help assess the degree of Native American ancestry inherited by Latino populations we sampled 25 Mayans and 5 Mexican Indians collected through Coriell's Institute. Levels of European, Asian, and African descent in Latinos were inferred through the USC Multiethnic Panel (USC MEP, formed from a sample from the Multiethnic Cohort (MEC study, the Yoruba African samples from HapMap II, the Singapore Chinese Health Study, and a prospective cohort from Shanghai, China. A total of 233 ancestry informative markers were genotyped for 538 LALES Latinos, 30 Native Americans, and 355 USC MEP individuals (African Americans, Japanese, Chinese, European Americans, Latinos, and Native Hawaiians. Sensitivity of ancestry estimates to relative sample size was considered. Results We detected strong evidence for recent population admixture in LALES Latinos. Gradients of increasing Native American background and of correspondingly decreasing European ancestry were observed as a function of birth origin from North to South. The strongest excess of homozygosity, a reflection of recent population admixture, was observed in non-US born Latinos that recently populated the US. A set of 42 SNPs especially informative for distinguishing between Native Americans and Europeans were identified. Conclusion These findings reflect the historic migration patterns of Native Americans and suggest that while the 'Latino' label is used to categorize the entire population, there exists a strong degree of heterogeneity within that population, and that

  5. BIODIVERSITY MAPPING VIA NATURA 2000 CONSERVATION STATUS AND EBV ASSESSMENT USING AIRBORNE LASER SCANNING IN ALKALI GRASSLANDS

    Directory of Open Access Journals (Sweden)

    A. Zlinszky

    2016-06-01

    Full Text Available Biodiversity is an ecological concept, which essentially involves a complex sum of several indicators. One widely accepted such set of indicators is prescribed for habitat conservation status assessment within Natura 2000, a continental-scale conservation programme of the European Union. Essential Biodiversity Variables are a set of indicators designed to be relevant for biodiversity and suitable for global-scale operational monitoring. Here we revisit a study of Natura 2000 conservation status mapping via airbone LIDAR that develops individual remote sensing-derived proxies for every parameter required by the Natura 2000 manual, from the perspective of developing regional-scale Essential Biodiversity Variables. Based on leaf-on and leaf-off point clouds (10 pt/m2 collected in an alkali grassland area, a set of data products were calculated at 0.5 ×0.5 m resolution. These represent various aspects of radiometric and geometric texture. A Random Forest machine learning classifier was developed to create fuzzy vegetation maps of classes of interest based on these data products. In the next step, either classification results or LIDAR data products were selected as proxies for individual Natura 2000 conservation status variables, and fine-tuned based on field references. These proxies showed adequate performance and were summarized to deliver Natura 2000 conservation status with 80% overall accuracy compared to field references. This study draws attention to the potential of LIDAR for regional-scale Essential Biodiversity variables, and also holds implications for global-scale mapping. These are (i the use of sensor data products together with habitat-level classification, (ii the utility of seasonal data, including for non-seasonal variables such as grassland canopy structure, and (iii the potential of fuzzy mapping-derived class probabilities as proxies for species presence and absence.

  6. Biodiversity Mapping via Natura 2000 Conservation Status and Ebv Assessment Using Airborne Laser Scanning in Alkali Grasslands

    Science.gov (United States)

    Zlinszky, A.; Deák, B.; Kania, A.; Schroiff, A.; Pfeifer, N.

    2016-06-01

    Biodiversity is an ecological concept, which essentially involves a complex sum of several indicators. One widely accepted such set of indicators is prescribed for habitat conservation status assessment within Natura 2000, a continental-scale conservation programme of the European Union. Essential Biodiversity Variables are a set of indicators designed to be relevant for biodiversity and suitable for global-scale operational monitoring. Here we revisit a study of Natura 2000 conservation status mapping via airbone LIDAR that develops individual remote sensing-derived proxies for every parameter required by the Natura 2000 manual, from the perspective of developing regional-scale Essential Biodiversity Variables. Based on leaf-on and leaf-off point clouds (10 pt/m2) collected in an alkali grassland area, a set of data products were calculated at 0.5 ×0.5 m resolution. These represent various aspects of radiometric and geometric texture. A Random Forest machine learning classifier was developed to create fuzzy vegetation maps of classes of interest based on these data products. In the next step, either classification results or LIDAR data products were selected as proxies for individual Natura 2000 conservation status variables, and fine-tuned based on field references. These proxies showed adequate performance and were summarized to deliver Natura 2000 conservation status with 80% overall accuracy compared to field references. This study draws attention to the potential of LIDAR for regional-scale Essential Biodiversity variables, and also holds implications for global-scale mapping. These are (i) the use of sensor data products together with habitat-level classification, (ii) the utility of seasonal data, including for non-seasonal variables such as grassland canopy structure, and (iii) the potential of fuzzy mapping-derived class probabilities as proxies for species presence and absence.

  7. Mapping of gold nanostructure-enhanced near fields via laser scanning second-harmonic generation and ablation

    DEFF Research Database (Denmark)

    Fiutowski, Jacek; Maibohm, Christian; Kostiučenko, Oksana

    2012-01-01

    The optical near-field of metal films can be modified in a straightforward manner by incorporating nanostructures on the surface. The corresponding field enhancement, which may be due to the lightning rod effect as well as the excitation of plasmon modes, results in a local change of the optical...... surface response. A transparent thin film on top of the nanostructures can be partially ablated via illumination with near-infrared light. Local variations of the ablation rate due to field enhancement are readily mapped with subdiffractional resolution, as confirmed by a direct comparison to theoretical...

  8. North African populations carry the signature of admixture with Neandertals.

    Directory of Open Access Journals (Sweden)

    Federico Sánchez-Quinto

    Full Text Available One of the main findings derived from the analysis of the Neandertal genome was the evidence for admixture between Neandertals and non-African modern humans. An alternative scenario is that the ancestral population of non-Africans was closer to Neandertals than to Africans because of ancient population substructure. Thus, the study of North African populations is crucial for testing both hypotheses. We analyzed a total of 780,000 SNPs in 125 individuals representing seven different North African locations and searched for their ancestral/derived state in comparison to different human populations and Neandertals. We found that North African populations have a significant excess of derived alleles shared with Neandertals, when compared to sub-Saharan Africans. This excess is similar to that found in non-African humans, a fact that can be interpreted as a sign of Neandertal admixture. Furthermore, the Neandertal's genetic signal is higher in populations with a local, pre-Neolithic North African ancestry. Therefore, the detected ancient admixture is not due to recent Near Eastern or European migrations. Sub-Saharan populations are the only ones not affected by the admixture event with Neandertals.

  9. North African populations carry the signature of admixture with Neandertals

    DEFF Research Database (Denmark)

    Sánchez-Quinto, Federico; Botigué, Laura R; Civit, Sergi

    2012-01-01

    One of the main findings derived from the analysis of the Neandertal genome was the evidence for admixture between Neandertals and non-African modern humans. An alternative scenario is that the ancestral population of non-Africans was closer to Neandertals than to Africans because of ancient popu...

  10. Premixed intravenous admixtures: a positive development for hospital pharmacy.

    Science.gov (United States)

    Lee, H E

    1983-06-01

    The development of premixed intravenous admixtures is reviewed in a historical context, and its effects on hospital pharmacy practice are discussed. As pharmaceutical manufacturers introduce more i.v. medications in ready-to-use containers, the same complaints that were voiced by pharmacists about unit dose packaging and ready-to-dispense tablets and capsules are being aired. But premixed i.v. admixtures are a logical extension of the basic unit dose principle of providing a readily identifiable and ready-to-administer dose. The time and cost savings these products offer are needed in hospital pharmacies. Some of the disadvantages of these products--including storage and freezer space and multiplicity of administration systems--are overcome by proper planning and education of personnel. If fewer personnel are now needed to prepare i.v. admixtures, then those personnel should be used to improve patient care in other ways. The use of premixed i.v. admixtures is a positive technological advance in drug packaging. Its advantages outweight its disadvantages, and it will soon be become the universally accepted form of i.v. drug packaging.

  11. Scanning micro-Hall probe mapping of magnetic flux distributions and current densities in YBa{sub 2}Cu{sub 3}O{sub 7}

    Energy Technology Data Exchange (ETDEWEB)

    Xing, W.; Heinrich, B. [Simon Fraser Univ., British Columbia (Canada); Zhou, H. [CTF Systems, Inc., British Columbia (Canada)] [and others

    1994-12-31

    Mapping of the magnetic flux density B{sub z} (perpendicular to the film plane) for a YBa{sub 2}Cu{sub 3}O{sub 7} thin-film sample was carried out using a scanning micro-Hall probe. The sheet magnetization and sheet current densities were calculated from the B{sub z} distributions. From the known sheet magnetization, the tangential (B{sub x,y}) and normal components of the flux density B were calculated in the vicinity of the film. It was found that the sheet current density was mostly determined by 2B{sub x,y}/d, where d is the film thickness. The evolution of flux penetration as a function of applied field will be shown.

  12. Scanning micro-Hall probe mapping of magnetic flux distributions and current densities in YBa2Cu3O7 thin films

    Science.gov (United States)

    Xing, W.; Heinrich, B.; Zhou, HU; Fife, A. A.; Cragg, A. R.; Grant, P. D.

    1995-01-01

    Mapping of the magnetic flux density B(sub z) (perpendicular to the film plane) for a YBa2Cu3O7 thin-film sample was carried out using a scanning micro-Hall probe. The sheet magnetization and sheet current densities were calculated from the B(sub z) distributions. From the known sheet magnetization, the tangential (B(sub x,y)) and normal components of the flux density B were calculated in the vicinity of the film. It was found that the sheet current density was mostly determined by 2B(sub x,y)/d, where d is the film thickness. The evolution of flux penetration as a function of applied field will be shown.

  13. Ultrasonic attenuation maps of liver based on a conventional B-scan and an amplitude loss technique.

    Science.gov (United States)

    Shmulewitz, A; Heyman, Z; Walach, E; Ramot, B; Itzchak, Y

    1990-10-01

    The authors present a novel ultrasonic amplitude loss technique, using image processing techniques and designed for computation of local attenuation estimates. Three different estimation approaches were evaluated: the extended Prony, the maximum likelihood, and the least squares approaches. The latter two approaches were found to result in a much higher estimation error than that observed for the Prony method. The attenuation values in the normal population (49 subjects) were 0.44 +/- 0.03 dB/MHz/cm. Three hundred sixty-seven liver scans from 266 patients were evaluated. Hodgkin's lymphoma patients with liver involvement had attenuation values of 0.22 +/- 0.07 dB/MHz/cm. Low attenuation values also were observed for four patients with viral hepatitis (0.31 +/- 0.08 dB/MHz/cm). The detectability of other disease states was not increased by these global attenuation estimates; however, the results demonstrate possible potential uses for the proposed technique for the diagnosis of diffuse liver disease.

  14. Effect of Some Admixtures on the Hydration of Silica Fume and Hydrated Lime

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    The effects of sodium salt of naphthalene formaldehyde sulfonic acid and stearic acid on the hydration of silica fume and Ca(0H)2 have been investigated. The hydration was carried out at 60℃ and W/S ratio of 4 for various time intervals namely, 1, 3, 7 and 28 days and in the presence of 0.2% and 5% superplasticizer and stearic acid. The results of the hydration kinetics show that both admixtures accelerate the hydration reaction of silica fume and calcium hydroxide during the first 7 days. Whereas, after 28 days hydration there is no significant effect. Generally, most of free calcium hydroxide seems to be consumed after 28 days. In addition, the phase composition as well as the microstructure of the formed hydrates was examined by using X-ray diffraction analysis (XRD) and scanning electron microscopy (SEM) respectively.

  15. Determining ancestry proportions in complex admixture scenarios in South Africa using a novel proxy ancestry selection method.

    Directory of Open Access Journals (Sweden)

    Emile R Chimusa

    Full Text Available Admixed populations can make an important contribution to the discovery of disease susceptibility genes if the parental populations exhibit substantial variation in susceptibility. Admixture mapping has been used successfully, but is not designed to cope with populations that have more than two or three ancestral populations. The inference of admixture proportions and local ancestry and the imputation of missing genotypes in admixed populations are crucial in both understanding variation in disease and identifying novel disease loci. These inferences make use of reference populations, and accuracy depends on the choice of ancestral populations. Using an insufficient or inaccurate ancestral panel can result in erroneously inferred ancestry and affect the detection power of GWAS and meta-analysis when using imputation. Current algorithms are inadequate for multi-way admixed populations. To address these challenges we developed PROXYANC, an approach to select the best proxy ancestral populations. From the simulation of a multi-way admixed population we demonstrate the capability and accuracy of PROXYANC and illustrate the importance of the choice of ancestry in both estimating admixture proportions and imputing missing genotypes. We applied this approach to a complex, uniquely admixed South African population. Using genome-wide SNP data from over 764 individuals, we accurately estimate the genetic contributions from the best ancestral populations: isiXhosa [Formula: see text], ‡Khomani SAN [Formula: see text], European [Formula: see text], Indian [Formula: see text], and Chinese [Formula: see text]. We also demonstrate that the ancestral allele frequency differences correlate with increased linkage disequilibrium in the South African population, which originates from admixture events rather than population bottlenecks.The collective term for people of mixed ancestry in southern Africa is "Coloured," and this is officially recognized in South

  16. Ancestry inference in complex admixtures via variable-length Markov chain linkage models.

    Science.gov (United States)

    Rodriguez, Jesse M; Bercovici, Sivan; Elmore, Megan; Batzoglou, Serafim

    2013-03-01

    Inferring the ancestral origin of chromosomal segments in admixed individuals is key for genetic applications, ranging from analyzing population demographics and history, to mapping disease genes. Previous methods addressed ancestry inference by using either weak models of linkage disequilibrium, or large models that make explicit use of ancestral haplotypes. In this paper we introduce ALLOY, an efficient method that incorporates generalized, but highly expressive, linkage disequilibrium models. ALLOY applies a factorial hidden Markov model to capture the parallel process producing the maternal and paternal admixed haplotypes, and models the background linkage disequilibrium in the ancestral populations via an inhomogeneous variable-length Markov chain. We test ALLOY in a broad range of scenarios ranging from recent to ancient admixtures with up to four ancestral populations. We show that ALLOY outperforms the previous state of the art, and is robust to uncertainties in model parameters.

  17. Compatibility of repair mortar with migrating corrosion inhibiting admixtures

    Energy Technology Data Exchange (ETDEWEB)

    Bjegovic, D.; Ukrainczyk, V. [Univ. of Zagreb (Croatia). Faculty of Civil Engineering; Ukrainczyk, B. [LGM, Zagreb (Croatia); Miksic, B. [CORTEC Corp., St. Paul, MN (United States)

    1997-08-01

    One of the methods for corrosion protection of reinforced concrete is the use of migrating corrosion inhibitor as an admixture in repair mortars. The admixture must be effective for corrosion protection and compatible with polymers added to repair mortar to improve properties of fresh and hardened mortar. This paper presents experimental results on compatibility of a migrating corrosion inhibitor added to two repair mortars based on an inorganic binder modified with polymers. The influence of a migrating inhibitor on the properties of fresh and hardened mortars was tested. The effectiveness on reinforcement corrosion protection has been tested according to ASTM G 109. Test results prove that the investigated migrating inhibitor is compatible with repair mortars and that it delays corrosion of the reinforcement.

  18. Assessment of Commercial Corrosion Inhibiting Admixtures for Reinforced Concrete

    OpenAIRE

    Brown, Michael Carey

    1999-01-01

    Corrosion of reinforcing steel in concrete exposed to chloride-laden environments is a well-known and documented phenomenon. The need for cost effective systems for protection against corrosion has become increasingly clear since the first observations of severe corrosion damage to interstate bridges in the 1960's. As one potential solution to the mounting problem of corrosion deterioration of structures, corrosion-inhibiting admixtures have been researched and introduced into service. ...

  19. Mirror matter admixtures in K_L to mu^+ mu^-

    CERN Document Server

    Sánchez-Colón, G; Sanchez-Colon, Gabriel; Garcia, Augusto

    2006-01-01

    Our previous analysis on the contributions of mirror matter admixtures in ordinary hadrons to K_L to gamma gamma is extended to study the relevance of such contributions to the K_L to mu^+ mu^- rare decay. The mixing angle of the admixtures previously determined to describe the enhancement phenomenon in two body non-leptonic decays of strange hadrons is used, along with recent results for the description of the strong and electromagnetic interaction parts of the transition amplitudes. We find that these admixtures give a significant contribution with a small SU(3) breaking of only 2.8%, we also find a value of \\sim -17.9^{\\circ} for the eta-eta' mixing angle consistent with some of its determinations in the literature and a preferred negative value around -16 for the local counter-term contribution chi_1 + chi_2 consistent with the existence of a unique counter-term assuming lepton universality. We conclude that those mixings may be relevant in low energy physics and should not be ignored.

  20. Laser-scanning astrocyte mapping reveals increased glutamate-responsive domain size and disrupted maturation of glutamate uptake following neonatal cortical freeze-lesion

    Directory of Open Access Journals (Sweden)

    Mortiz eArmbruster

    2014-09-01

    Full Text Available Astrocytic uptake of glutamate shapes extracellular neurotransmitter dynamics, receptor activation, and synaptogenesis. During development, glutamate transport becomes more robust. How neonatal brain insult affects the functional maturation of glutamate transport remains unanswered. Neonatal brain insult can lead to developmental delays, cognitive losses, and epilepsy; the disruption of glutamate transport is known to cause changes in synaptogenesis, receptor activation, and seizure. Using the neonatal freeze-lesion (FL model, we have investigated how insult affects the maturation of astrocytic glutamate transport. As lesioning occurs on the day of birth, a time when astrocytes are still functionally immature, this model is ideal for identifying changes in astrocyte maturation following insult. Reactive astrocytosis, astrocyte proliferation, and in vitro hyperexcitability are known to occur in this model. To probe astrocyte glutamate transport with better spatial precision we have developed a novel technique, Laser Scanning Astrocyte Mapping (LSAM, which combines glutamate transport current (TC recording from astrocytes with laser scanning glutamate photolysis. LSAM allows us to identify the area from which a single astrocyte can transport glutamate and to quantify spatial heterogeneity in the rate of glutamate clearance kinetics within that domain. Using LSAM, we report that cortical astrocytes have an increased glutamate-responsive area following FL and that TCs have faster decay times in distal, as compared to proximal processes. Furthermore, the developmental shift from GLAST- to GLT-1-dominated clearance is disrupted following FL. These findings introduce a novel method to probe astrocyte glutamate uptake and show that neonatal cortical FL disrupts the functional maturation of cortical astrocytes.

  1. Identifying genomic regions for fine-mapping using genome scan meta-analysis (GSMA) to identify the minimum regions of maximum significance (MRMS) across populations.

    Science.gov (United States)

    Cooper, Margaret E; Goldstein, Toby H; Maher, Brion S; Marazita, Mary L

    2005-12-30

    In order to detect linkage of the simulated complex disease Kofendrerd Personality Disorder across studies from multiple populations, we performed a genome scan meta-analysis (GSMA). Using the 7-cM microsatellite map, nonparametric multipoint linkage analyses were performed separately on each of the four simulated populations independently to determine p-values. The genome of each population was divided into 20-cM bin regions, and each bin was rank-ordered based on the most significant linkage p-value for that population in that region. The bin ranks were then averaged across all four studies to determine the most significant 20-cM regions over all studies. Statistical significance of the averaged bin ranks was determined from a normal distribution of randomly assigned rank averages. To narrow the region of interest for fine-mapping, the meta-analysis was repeated two additional times, with each of the 20-cM bins offset by 7 cM and 13 cM, respectively, creating regions of overlap with the original method. The 6-7 cM shared regions, where the highest averaged 20-cM bins from each of the three offsets overlap, designated the minimum region of maximum significance (MRMS). Application of the GSMA-MRMS method revealed genome wide significance (p-values refer to the average rank assigned to the bin) at regions including or adjacent to all of the simulated disease loci: chromosome 1 (p value value value < 0.05 for 7-14 cM, the region adjacent to D4). This GSMA analysis approach demonstrates the power of linkage meta-analysis to detect multiple genes simultaneously for a complex disorder. The MRMS method enhances this powerful tool to focus on more localized regions of linkage.

  2. Genome-wide analysis in Brazilian Xavante Indians reveals low degree of admixture.

    Directory of Open Access Journals (Sweden)

    Patricia C Kuhn

    Full Text Available Characterization of population genetic variation and structure can be used as tools for research in human genetics and population isolates are of great interest. The aim of the present study was to characterize the genetic structure of Xavante Indians and compare it with other populations. The Xavante, an indigenous population living in Brazilian Central Plateau, is one of the largest native groups in Brazil. A subset of 53 unrelated subjects was selected from the initial sample of 300 Xavante Indians. Using 86,197 markers, Xavante were compared with all populations of HapMap Phase III and HGDP-CEPH projects and with a Southeast Brazilian population sample to establish its population structure. Principal Components Analysis showed that the Xavante Indians are concentrated in the Amerindian axis near other populations of known Amerindian ancestry such as Karitiana, Pima, Surui and Maya and a low degree of genetic admixture was observed. This is consistent with the historical records of bottlenecks experience and cultural isolation. By calculating pair-wise F(st statistics we characterized the genetic differentiation between Xavante Indians and representative populations of the HapMap and from HGDP-CEPH project. We found that the genetic differentiation between Xavante Indians and populations of Ameridian, Asian, European, and African ancestry increased progressively. Our results indicate that the Xavante is a population that remained genetically isolated over the past decades and can offer advantages for genome-wide mapping studies of inherited disorders.

  3. Genome-wide analysis in Brazilian Xavante Indians reveals low degree of admixture.

    Science.gov (United States)

    Kuhn, Patricia C; Horimoto, Andréa R V Russo; Sanches, José Maurício; Vieira Filho, João Paulo B; Franco, Luciana; Fabbro, Amaury Dal; Franco, Laercio Joel; Pereira, Alexandre C; Moises, Regina S

    2012-01-01

    Characterization of population genetic variation and structure can be used as tools for research in human genetics and population isolates are of great interest. The aim of the present study was to characterize the genetic structure of Xavante Indians and compare it with other populations. The Xavante, an indigenous population living in Brazilian Central Plateau, is one of the largest native groups in Brazil. A subset of 53 unrelated subjects was selected from the initial sample of 300 Xavante Indians. Using 86,197 markers, Xavante were compared with all populations of HapMap Phase III and HGDP-CEPH projects and with a Southeast Brazilian population sample to establish its population structure. Principal Components Analysis showed that the Xavante Indians are concentrated in the Amerindian axis near other populations of known Amerindian ancestry such as Karitiana, Pima, Surui and Maya and a low degree of genetic admixture was observed. This is consistent with the historical records of bottlenecks experience and cultural isolation. By calculating pair-wise F(st) statistics we characterized the genetic differentiation between Xavante Indians and representative populations of the HapMap and from HGDP-CEPH project. We found that the genetic differentiation between Xavante Indians and populations of Ameridian, Asian, European, and African ancestry increased progressively. Our results indicate that the Xavante is a population that remained genetically isolated over the past decades and can offer advantages for genome-wide mapping studies of inherited disorders.

  4. Nano-Localized Thermal Analysis and Mapping of Surface and Sub-Surface Thermal Properties Using Scanning Thermal Microscopy (SThM).

    Science.gov (United States)

    Pereira, Maria J; Amaral, Joao S; Silva, Nuno J O; Amaral, Vitor S

    2016-12-01

    Determining and acting on thermo-physical properties at the nanoscale is essential for understanding/managing heat distribution in micro/nanostructured materials and miniaturized devices. Adequate thermal nano-characterization techniques are required to address thermal issues compromising device performance. Scanning thermal microscopy (SThM) is a probing and acting technique based on atomic force microscopy using a nano-probe designed to act as a thermometer and resistive heater, achieving high spatial resolution. Enabling direct observation and mapping of thermal properties such as thermal conductivity, SThM is becoming a powerful tool with a critical role in several fields, from material science to device thermal management. We present an overview of the different thermal probes, followed by the contribution of SThM in three currently significant research topics. First, in thermal conductivity contrast studies of graphene monolayers deposited on different substrates, SThM proves itself a reliable technique to clarify the intriguing thermal properties of graphene, which is considered an important contributor to improve the performance of downscaled devices and materials. Second, SThM's ability to perform sub-surface imaging is highlighted by thermal conductivity contrast analysis of polymeric composites. Finally, an approach to induce and study local structural transitions in ferromagnetic shape memory alloy Ni-Mn-Ga thin films using localized nano-thermal analysis is presented.

  5. Cross-validation of serial optical coherence scanning and diffusion tensor imaging: a study on neural fiber maps in human medulla oblongata.

    Science.gov (United States)

    Wang, Hui; Zhu, Junfeng; Reuter, Martin; Vinke, Louis N; Yendiki, Anastasia; Boas, David A; Fischl, Bruce; Akkin, Taner

    2014-10-15

    We established a strategy to perform cross-validation of serial optical coherence scanner imaging (SOCS) and diffusion tensor imaging (DTI) on a postmortem human medulla. Following DTI, the sample was serially scanned by SOCS, which integrates a vibratome slicer and a multi-contrast optical coherence tomography rig for large-scale three-dimensional imaging at microscopic resolution. The DTI dataset was registered to the SOCS space. An average correlation coefficient of 0.9 was found between the co-registered fiber maps constructed by fractional anisotropy and retardance contrasts. Pixelwise comparison of fiber orientations demonstrated good agreement between the DTI and SOCS measures. Details of the comparison were studied in regions exhibiting a variety of fiber organizations. DTI estimated the preferential orientation of small fiber tracts; however, it didn't capture their complex patterns as SOCS did. In terms of resolution and imaging depth, SOCS and DTI complement each other, and open new avenues for cross-modality investigations of the brain.

  6. Effect of Anti-freezing Admixtures on Alkali-silica Reaction in Mortars

    Institute of Scientific and Technical Information of China (English)

    LIU Junzhe; LI Yushun; LV Lihua

    2005-01-01

    The influence of anti-freezing admixture on the alkali aggregate reaction in mortar was analyzed with accelerated methods. It is confirmed that the addition of sodium salt ingredients of anti-freezing admixture accelerates the alkali silica reaction to some extent, whereas calcium salt ingredient of anti-freezing admixture reduces the expansion of alkali silica reaction caused by high alkali cement. It is found that the addition of the fly ash considerably suppresses the expansion of alkali silica reaction induced by the anti-freezing admixtures.

  7. Practical handling of AIO admixtures – Guidelines on Parenteral Nutrition, Chapter 10

    Directory of Open Access Journals (Sweden)

    Stanga, Z.

    2009-11-01

    Full Text Available All-in-one admixtures (AIO-admixtures provide safe, effective and low-risk PN (parenteral nutrition for practically all indications and applications. Water, energy (carbohydrates and lipids, amino acids, vitamins and trace elements are infused together with PN either as industrially-manufactured AIO admixtures provided as two- or three-chamber bags (shelf life usually more than 12 months completed with electrolytes and micronutrients where appropriate or as individually compounded ready-to-use AIO admixtures (compounding, usually prepared by a pharmacy on either a daily or weekly basis and stored at 2–8°C. Physico-chemical and microbial stability of an AIO admixture is essential for the safety and effectiveness of patient-specific PN, and its assurance requires specialist pharmaceutical knowledge. The stability should be documented for an application period of 24 (–48 hours. It is advisable to offer a limited selection of different PN regimes in each hospital. For reasons of drug and medication safety, PN admixtures prepared for individual patients must be correctly labelled and specifications for storage conditions must also be followed during transport. Monitoring is required where applicable. Micronutrients are usually administered separately to AIO admixtures. In case compatibility and stability have been well documented trace elements and/or combination preparations including water-soluble or water-soluble/fat soluble vitamin supplements can be added to PN admixtures under strict aseptic conditions. AIO admixtures are usually not used as vehicles for drugs (incompatibilities.

  8. The influence of shrinkage reducing admixtures on plastic shrinkage

    Directory of Open Access Journals (Sweden)

    Mora, J.

    2003-12-01

    Full Text Available Shrinkage reducing admixtures (SRAs are viable alternatives for reducing plastic shrinkage cracking in concrete. The objective of the present paper is to study early age plastic shrinkage in restrained concrete elements, where three different SRAs have been used. The influence of the admixture is analyzed through the following measurements: capillary pressure, evaporation, temperature evolution, crack evolution and settlement. The tests for studying the cracking and deformation were made on two different configurations (i.e., restrained prisms with reduced cross-section and restrained panel, in a wind tunnel, with controlled wind temperature and velocity. The conclusions obtained indicate the viability of the use of this type of admixture and the usefulness of the test methods.

    Los aditivos reductores de retracción (SRAs se plantean, hoy en día, como una alternativa viable para reducir la fisuración por retracción plástica. El objetivo del presente artículo es conocer mejor y predecir el comportamiento a primeras edades de la retracción plástica en elementos estructurales coaccionados, a los que se les ha añadido diversos aditivos reductores de retracción (tres tipos diferentes. Esta influencia se analiza a través de las siguientes propiedades: presión capilar, evaporación, evolución de temperaturas, evolución de fisuración, y deformaciones verticales de asentamiento. Los ensayos para estudiar la fisuración y las deformaciones se han realizado sobre diferentes configuraciones (prisma restringido con estrangulamiento y panel restringido, en un túnel de viento, con temperaturas y velocidades de viento controladas. Las conclusiones obtenidas señalan la viabilidad del empleo de este tipo de aditivos y la bondad de los métodos experimentales utilizados.

  9. Whistler Solitons in Plasma with Anisotropic Hot Electron Admixture

    Science.gov (United States)

    Khazanov, G. V.; Krivorutsky, E. N.; Gallagher, D. L.

    1999-01-01

    The longitudinal and transverse modulation instability of whistler waves in plasma, with a small admixture of hot anisotropic electrons, is discussed. If the hot particles temperature anisotropy is positive, it is found that, in such plasma, longitudinal perturbations can lead to soliton formation for frequencies forbidden in cold plasma. The soliton is enriched by hot particles. The frequency region unstable to transverse modulation in cold plasma in the presence of hot electrons is divided by stable domains. For both cases the role of hot electrons is more significant for whistlers with smaller frequencies.

  10. Mirror matter admixtures in K_S to gamma gamma

    CERN Document Server

    Sánchez-Colón, G; Sanchez-Colon, Gabriel; Garcia, Augusto

    2006-01-01

    The latest measurement of the K_S to gamma gamma branching ratio clearly shows an enhancement over the current theoretical prediction. As in other K and B meson decays, this invites to consider the possibility of the contribution of new physics. We study a particular form of the latter, which may be referred to as manifest mirror symmetry. The experimental data are described using previously determined values for the mixing angles of the admixtures of mirror matter in ordinary hadrons and by assuming that for pi^0, eta, eta', the mirror decay amplitudes have the same magnitudes as their ordinary counterparts.

  11. Symmetry limit properties of decay amplitudes with mirror matter admixtures

    CERN Document Server

    Sánchez-Colón, G; Sanchez-Colon, Gabriel; Garcia, Augusto

    2006-01-01

    We extend our previous analysis on the symmetry limit properties of non-leptonic and weak radiative decay amplitudes of hyperons in a scheme of mirror matter admixtures in physical hadrons to include the two-body non-leptonic decays of $\\Omega^-$ and the two photon and two pion decays of kaons. We show that the so-called parity-conserving amplitudes predicted for all the decays vanish in the strong flavor SU(3) symmetry limit. We also establish the specific conditions under which the corresponding so-called parity-violating amplitudes vanish in the same limit.

  12. Autosomal admixture levels are informative about sex bias in admixed populations.

    Science.gov (United States)

    Goldberg, Amy; Verdu, Paul; Rosenberg, Noah A

    2014-11-01

    Sex-biased admixture has been observed in a wide variety of admixed populations. Genetic variation in sex chromosomes and functions of quantities computed from sex chromosomes and autosomes have often been examined to infer patterns of sex-biased admixture, typically using statistical approaches that do not mechanistically model the complexity of a sex-specific history of admixture. Here, expanding on a model of Verdu and Rosenberg (2011) that did not include sex specificity, we develop a model that mechanistically examines sex-specific admixture histories. Under the model, multiple source populations contribute to an admixed population, potentially with their male and female contributions varying over time. In an admixed population descended from two source groups, we derive the moments of the distribution of the autosomal admixture fraction from a specific source population as a function of sex-specific introgression parameters and time. Considering admixture processes that are constant in time, we demonstrate that surprisingly, although the mean autosomal admixture fraction from a specific source population does not reveal a sex bias in the admixture history, the variance of autosomal admixture is informative about sex bias. Specifically, the long-term variance decreases as the sex bias from a contributing source population increases. This result can be viewed as analogous to the reduction in effective population size for populations with an unequal number of breeding males and females. Our approach suggests that it may be possible to use the effect of sex-biased admixture on autosomal DNA to assist with methods for inference of the history of complex sex-biased admixture processes.

  13. Nuclear Scans

    Science.gov (United States)

    Nuclear scans use radioactive substances to see structures and functions inside your body. They use a special ... images. Most scans take 20 to 45 minutes. Nuclear scans can help doctors diagnose many conditions, including ...

  14. 彩色扫描军事地形图等高线提取方法%Contour lines extraction from color scanned military topographical maps

    Institute of Scientific and Technical Information of China (English)

    董贤军; 陈鸿; 汤晓安; 张海英

    2009-01-01

    提出了一种基于HSV色彩模型的等高线提取方法.首先去除地形图中的黑色要素,然后选取原图等高线上一像素点色调值作为初值,按一定步长逐步扩大色调阈值,借助对应二值图连通区域数确定阈值区间.该算法无须人为指定聚类中心和类数,初始像素点的选取对提取结果不起决定作用.实验结果验证了算法的鲁棒性,并取得比较理想提取效果.%An effective method based on HSV color model for extracting contour lines from color scanned topographical maps was proposed.Firstly the black elements were removed; the value of a pixel in contour line was regarded as the initial value; the scope of hue threshold was expanded in accord with definite step; the number of connectivity region was used to determine the threshold range. This algorithm does not need to artificially specify the centers and quantity of color clustering, and the choice of the initial pixel does not make crucial effect on the quality of the final result. The experimental results verify that this algorithm is robust,and can obtain good extracting effect.

  15. Incorporation of Mineral Admixtures in Sustainable High Performance Concrete

    Directory of Open Access Journals (Sweden)

    Nima Farzadnia

    2011-07-01

    Full Text Available Concrete is a widely used construction material around the world, and its properties have been undergoing changes through technological advancement. Numerous types of concrete have been developed to enhance the different properties of concrete. So far, this development can be divided into four stages. The earliest is the traditional normal strength concrete which is composed of only four constituent materials, which are cement, water, fine and coarse aggregates. With a fast population growth and a higher demand for housing and infrastructure, accompanied by recent developments in civil engineering, such as high-rise buildings and long-span bridges, higher compressive strength concrete was needed. At the beginning, reducing the water-cement ratio was the easiest way to achieve the high compressive strength. Thereafter, the fifth ingredient, a water reducing agent or super plasticizer, was indispensable. However, sometimes the compressive strength was not as important as some other properties, such as low permeability, durability and workability. Thus, high performance concrete was proposed and widely studied at the end of the last century. Currently, high-performance concrete is used in massive volumes due to its technical and economic advantages. Such materials are characterized by improved mechanical and durability properties resulting from the use of chemical and mineral admixtures as well as specialized production processes. This paper reviews the incorporation of mineral admixtures in binary, ternary and quaternary blended mortars in concrete.

  16. Patterns of admixture and population structure in native populations of Northwest North America.

    Directory of Open Access Journals (Sweden)

    Paul Verdu

    2014-08-01

    Full Text Available The initial contact of European populations with indigenous populations of the Americas produced diverse admixture processes across North, Central, and South America. Recent studies have examined the genetic structure of indigenous populations of Latin America and the Caribbean and their admixed descendants, reporting on the genomic impact of the history of admixture with colonizing populations of European and African ancestry. However, relatively little genomic research has been conducted on admixture in indigenous North American populations. In this study, we analyze genomic data at 475,109 single-nucleotide polymorphisms sampled in indigenous peoples of the Pacific Northwest in British Columbia and Southeast Alaska, populations with a well-documented history of contact with European and Asian traders, fishermen, and contract laborers. We find that the indigenous populations of the Pacific Northwest have higher gene diversity than Latin American indigenous populations. Among the Pacific Northwest populations, interior groups provide more evidence for East Asian admixture, whereas coastal groups have higher levels of European admixture. In contrast with many Latin American indigenous populations, the variance of admixture is high in each of the Pacific Northwest indigenous populations, as expected for recent and ongoing admixture processes. The results reveal some similarities but notable differences between admixture patterns in the Pacific Northwest and those in Latin America, contributing to a more detailed understanding of the genomic consequences of European colonization events throughout the Americas.

  17. Harmful admixtures assessment in sinter mixtures used in iron ore sinter plants in Poland

    Directory of Open Access Journals (Sweden)

    J. Korol

    2014-10-01

    Full Text Available In this study composition of sinter mixtures used in Polish sinter plants were established. Seven sinter mixtures composition were examined, based on iron-bearing materials, admixtures and fuels. Contents of harmful admixtures were examined according to three kinds of environmental impacts: emissions of SOx, heavy metals, polychlorinated dibenzodioxins and polychlorinated dibenzofurans (PCDDs/PCDFs.

  18. Patterns of admixture and population structure in native populations of Northwest North America.

    Science.gov (United States)

    Verdu, Paul; Pemberton, Trevor J; Laurent, Romain; Kemp, Brian M; Gonzalez-Oliver, Angelica; Gorodezky, Clara; Hughes, Cris E; Shattuck, Milena R; Petzelt, Barbara; Mitchell, Joycelynn; Harry, Harold; William, Theresa; Worl, Rosita; Cybulski, Jerome S; Rosenberg, Noah A; Malhi, Ripan S

    2014-08-01

    The initial contact of European populations with indigenous populations of the Americas produced diverse admixture processes across North, Central, and South America. Recent studies have examined the genetic structure of indigenous populations of Latin America and the Caribbean and their admixed descendants, reporting on the genomic impact of the history of admixture with colonizing populations of European and African ancestry. However, relatively little genomic research has been conducted on admixture in indigenous North American populations. In this study, we analyze genomic data at 475,109 single-nucleotide polymorphisms sampled in indigenous peoples of the Pacific Northwest in British Columbia and Southeast Alaska, populations with a well-documented history of contact with European and Asian traders, fishermen, and contract laborers. We find that the indigenous populations of the Pacific Northwest have higher gene diversity than Latin American indigenous populations. Among the Pacific Northwest populations, interior groups provide more evidence for East Asian admixture, whereas coastal groups have higher levels of European admixture. In contrast with many Latin American indigenous populations, the variance of admixture is high in each of the Pacific Northwest indigenous populations, as expected for recent and ongoing admixture processes. The results reveal some similarities but notable differences between admixture patterns in the Pacific Northwest and those in Latin America, contributing to a more detailed understanding of the genomic consequences of European colonization events throughout the Americas.

  19. Retinal locus for scanning text.

    Science.gov (United States)

    Timberlake, George T; Sharma, Manoj K; Grose, Susan A; Maino, Joseph H

    2006-01-01

    A method of mapping the retinal location of text during reading is described in which text position is plotted cumulatively on scanning laser ophthalmoscope retinal images. Retinal locations that contain text most often are the brightest in the cumulative plot, and locations that contain text least often are the darkest. In this way, the retinal area that most often contains text is determined. Text maps were plotted for eight control subjects without vision loss and eight subjects with central scotomas from macular degeneration. Control subjects' text maps showed that the fovea contained text most often. Text maps of five of the subjects with scotomas showed that they used the same peripheral retinal area to scan text and fixate. Text maps of the other three subjects with scotomas showed that they used separate areas to scan text and fixate. Retinal text maps may help evaluate rehabilitative strategies for training individuals with central scotomas to use a particular retinal area to scan text.

  20. Effects of Leaching Behavior of Calcium Ions on Compression and Durability of Cement-based Materials with Mineral Admixtures

    Directory of Open Access Journals (Sweden)

    Wei-Ting Lin

    2013-05-01

    Full Text Available Leaching of calcium ions increases the porosity of cement-based materials, consequently resulting in a negative effect on durability since it provides an entry for aggressive harmful ions, causing reinforcing steel corrosion. This study investigates the effects of leaching behavior of calcium ions on the compression and durability of cement-based materials. Since the parameters influencing the leaching behavior of cement-based materials are unclear and diverse, this paper focuses on the influence of added mineral admixtures (fly ash, slag and silica fume on the leaching behavior of calcium ions regarding compression and durability of cemented-based materials. Ammonium nitrate solution was used to accelerate the leaching process in this study. Scanning electron microscopy, X-ray diffraction analysis, and thermogravimetric analysis were employed to analyze and compare the cement-based material compositions prior to and after calcium ion leaching. The experimental results show that the mineral admixtures reduce calcium hydroxide quantity and refine pore structure through pozzolanic reaction, thus enhancing the compressive strength and durability of cement-based materials.

  1. Estimating individual admixture proportions from next generation sequencing data

    DEFF Research Database (Denmark)

    Skotte, Line; Korneliussen, Thorfinn Sand; Albrechtsen, Anders

    2013-01-01

    Inference of population structure and individual ancestry is important both for population genetics and for association studies. With next generation sequencing technologies it is possible to obtain genetic data for all accessible genetic variations in the genome. Existing methods for admixture...... analysis rely on known genotypes. However, individual genotypes cannot be inferred from low-depth sequencing data without introducing errors. This article presents a new method for inferring an individual's ancestry that takes the uncertainty introduced in next generation sequencing data into account....... This is achieved by working directly with genotype likelihoods that contain all relevant information of the unobserved genotypes. Using simulations as well as publicly available sequencing data, we demonstrate that the presented method has great accuracy even for very low-depth data. At the same time, we...

  2. Used cooking oil as a green chemical admixture in concrete

    Science.gov (United States)

    Salmia, B.; Che Muda, Zakaria; Ashraful Alam, Md; Sidek, L. M.; Hidayah, B.

    2013-06-01

    According to National Statistics Approximately 1.35 billion gallons of used oil are generated yearly. With the increasing of the concrete usage, a more cost effective and economic new type of admixtures may give positive impacts on the Malaysian construction building as well as worldwide concrete usage. To objective of this is study is to investigate the effect of used cooking oil in terms of slump test, compressive strength test and rebound hammer. By adding the used cooking oil to the concrete, it increases the slump value from 4% to 72%. And the compressive strength have an increment from 1% to 16.8%. The used cooking oil obtains the optimum contribution to the concrete mix proportion of containing used cooking oil of 1.50% from the cement content. The result of used cooking oil from experimental program of slump value and compressive strength proved that used cooking oil have positive effects on replacement of commercially available superplasticizer.

  3. Learning with Admixture: Modeling, Optimization, and Applications in Population Genetics

    DEFF Research Database (Denmark)

    Cheng, Jade Yu

    2016-01-01

    geneticists strive to establish working solutions to extract information from massive volumes of biological data. The steep increase in the quantity and quality of genomic data during the past decades provides a unique opportunity but also calls for new and improved algorithms and software to cope...... including population splits, effective population sizes, gene flow, etc. Since joining the CoalHMM development team in 2014, I have mainly contributed in two directions: 1) improving optimizations through heuristic-based evolutionary algorithms and 2) modeling of historical admixture events. Ohana, meaning...... approximation. With the estimated global ancestry and population relationships, Ohana provides a flexible selection signal detection process that considers any prior knowledge on the covariance structure, e.g population bottleneck or local adaptation. Statistical modeling and numerical optimization form...

  4. Techniques and methods of characterization of admixtures for the concrete

    Directory of Open Access Journals (Sweden)

    Palacios, M.

    2003-03-01

    Full Text Available Admixtures are defined as those products that are incorporated in the moment of the process of mixture of the concrete in a quantity not bigger than 5 by mass of the cement %, with relationship to the cement content in the concrete, with object of modifying the properties of the mixture in .state fresh and/or hardened. The behaviour of the admixtures depends on its chemical and ionic composition, the organic functional groups present, and the structure of the polymer and the distribution of molecular weight of the different polymers. In the present work the techniques and methods of characterization physical-chemistry, chemistry and ionic, structural, as well as of the polymers that constitute this admixtures, are described. A lot of techniques have been employed like: ionic chromatography, ultraviolet-visible spectroscopy (UV-VIS, Fourier transform infrared spectroscopy (FTIR, Fourier transform Raman spectroscopy (FT-Raman, nuclear magnetic resonance spectroscopy (1H-RMN and 13C-RMN, gel permeation chromatography (GPC. Two commercial admixtures have been selected to carry out this characterization, a superplastificant based on policarboxilates, and a reducer of the shrinkage based on polipropilenglycol.

    RESUMEN Se definen los aditivos como aquellos productos que son incorporados en el momento del amasado del hormigón en una cantidad no mayor del 5% en masa, con relación al contenido de cemento en el hormigón, con objeto de modificar las propiedades de la mezcla en estado fresco y/o endurecido. El comportamiento de los aditivos depende de su composición química e iónica, de los grupos funcionales orgánicos presentes, de la estructura del polímero y de la distribución de pesos moleculares de los diferentes polímeros que lo constituyen. En el presente trabajo se describen diferentes técnicas y métodos de caracterización físico-química, química e iónica, estructural, así como de los polímeros que

  5. Advanced Network Scanning

    Directory of Open Access Journals (Sweden)

    Ashiqur Rahman

    2016-07-01

    Full Text Available Network scanning is à procedure for identifying active hosts on a network, either for the purpose of attacking them or for network security assessment. Scanning procedures, such as ping sweeps and port scans, return information about which IP addresses map to live hosts that are active on the Internet and what services they offer. Another scanning method, inverse mapping, returns information about what IP addresses do not map to live hosts; this enables an attacker to make assumptions about viable addresses. Scanning is one of three components of intelligence gathering for an attacker. In the foot printing phase, the attacker creates a profile of the target organization, with information such as its domain name system (DNS and e-mail servers, and its IP address range. Most of this information is available online. In the scanning phase, the attacker finds information about the specific IP addresses that can be accessed over the Internet, their operating systems, the system architecture, and the services running on each computer. In the enumeration phase, the attacker gathers information such as network user and group names, routing tables, and Simple Network Management Protocol (SNMP data

  6. Viscosity and Electrical Conductivity of the Liquid Sn-3.8Ag-0.7Cu Alloy with Minor Co Admixtures

    Science.gov (United States)

    Yakymovych, A.; Sklyarchuk, V.; Plevachuk, Yu.; Sokoliuk, B.

    2016-10-01

    The viscosity and electrical conductivity as structure-sensitive transport properties of the liquid metals and alloys are important for modeling of the melting and solidification processes. The viscosity and electrical conductivity data provide additional information about the influence of impurities on the structure and physicochemical properties of the liquid metal matrix, which is useful for understanding of structural transformations in the liquid state. In the present work, an impact of minor Co admixtures on the viscosity and electrical conductivity of liquid Sn-3.8Ag-0.7Cu alloy was studied. An increase in viscosity with minor Co admixtures is in a satisfactory agreement with model predicted data obtained from thermodynamic approaches and suggests a significant impact of interatomic interactions. Cobalt admixtures significantly affect the electrical conductivity, which gradually decreases with increasing the amount of Co. Additionally, the sample microstructure has been examined using x-ray diffraction and scanning electron microscopy analyses. The formation of Sn-based Co-Sn intermetallic compounds was detected in the alloys with more than 1 wt.% Co.

  7. Finding new solutions in pediatric parenteral admixtures: how to improve quality and to deal with shortages

    Directory of Open Access Journals (Sweden)

    Dorota Watrobska-Swietlikowska

    2014-07-01

    Full Text Available Introduction: Pediatric parenteral nutrition enables normal growth even of preterm infants. Those children require, however, tailored parenteral nutrition and the creation of such can be challenging due to the risk of instability and shortages. Objective: Prototypical parenteral admixtures were created using different calcium salts (organic and inorganic and different lipid emulsions and tested for stability. 36 of parenteral admixtures containing two types of calcium salts: chloride or gluconolactobionate and different lipid emulsions (SMOFlipid® or Lipofundin MCT/LCT® were under investigation. Methods: Preliminary admixtures were prepared in two-chamber bags whereas lipid emulsions were placed separately in the second chamber. Pre-admixtures were stored for up to 21 days at +4ºC. Contents of the two chambers were combined at t = 0 or after 21 days of storage. Physical analysis of completed admixtures (visual inspection, microscopic observation, pH measurement and determination of the size distribution of oily droplets was carried out after 21 days of the storage. Stability of lipid, commercial emulsions stored in ethylene vinyl acetate (EVA bags for 42 days was also studied. Results: Irrespectively of the time of storage of preadmixtures and type of calcium salt and different lipid emulsions among 36 total parenteral admixtures only one showed signs of destabilization after preparation and one was unstable when stored for longer than 14 days. All other formulations were qualified to be stable during the study. All investigated commercial lipid emulsions were physically stable in EVA bags even when stored at room temperature. Conclusion: The study proved that it was possible to store pre-admixture in EVA bags for 21 days at 4ºC as well as that CAN (critical aggregation number and CaxP (the products of multiplication of calcium and phosphate ions concentration should not be used as reliable indicators of admixture physical stability. No

  8. Genetic Adaptation and Neandertal Admixture Shaped the Immune System of Human Populations.

    Science.gov (United States)

    Quach, Hélène; Rotival, Maxime; Pothlichet, Julien; Loh, Yong-Hwee Eddie; Dannemann, Michael; Zidane, Nora; Laval, Guillaume; Patin, Etienne; Harmant, Christine; Lopez, Marie; Deschamps, Matthieu; Naffakh, Nadia; Duffy, Darragh; Coen, Anja; Leroux-Roels, Geert; Clément, Frederic; Boland, Anne; Deleuze, Jean-François; Kelso, Janet; Albert, Matthew L; Quintana-Murci, Lluis

    2016-10-20

    Humans differ in the outcome that follows exposure to life-threatening pathogens, yet the extent of population differences in immune responses and their genetic and evolutionary determinants remain undefined. Here, we characterized, using RNA sequencing, the transcriptional response of primary monocytes from Africans and Europeans to bacterial and viral stimuli-ligands activating Toll-like receptor pathways (TLR1/2, TLR4, and TLR7/8) and influenza virus-and mapped expression quantitative trait loci (eQTLs). We identify numerous cis-eQTLs that contribute to the marked differences in immune responses detected within and between populations and a strong trans-eQTL hotspot at TLR1 that decreases expression of pro-inflammatory genes in Europeans only. We find that immune-responsive regulatory variants are enriched in population-specific signals of natural selection and show that admixture with Neandertals introduced regulatory variants into European genomes, affecting preferentially responses to viral challenges. Together, our study uncovers evolutionarily important determinants of differences in host immune responsiveness between human populations.

  9. Hydration Characteristics of Metakaolin Admixtured Cement using DTA, XRD and SEM Techniques

    Science.gov (United States)

    Govindarajan, D.; Gopalakrishnan, R.

    2008-04-01

    The paper aims to investigate hydration and pozzolanic reaction in Portland cement paste with different replacement percentages (0%, 10%, 20% and 30%) of metakaolin. The compressive strength of the metakaolin admixtured cement was measured at 1 day, 1 week and 4 weeks. The compressive strength developments of the metakaolin admixtured cement are compared with Portland cement. It is found that metakaolin contributes significantly to strength development as an accelerating admixture for Portland cement. The pozzolanic reactions and the reaction products were determined by DTA, XRD and SEM.

  10. Effect of polycarboxylate admixture structure on cement paste rheology

    Directory of Open Access Journals (Sweden)

    Aranda, M. A. G.

    2007-06-01

    Full Text Available The purpose of the present study was to analyze the effect of the structural differences in four polycarboxylate and polyether admixtures on the rheological properties of cement pastes with different chemical and mineralogical compositions and different active additions (CEM I 42.5 R, CEM I 52.5 R, CEM I 52.5 N/SR, CEM II/AV 42.5R, CEM II/B-L 32.5 R, CEM III/B 32.5R, BL I 52.5R and CAC – European standard EN 197-1:2000. The results of the minislump test concurred with the variations observed in the values of the rheological parameters (shear stress and plastic viscosity. The structural characteristic of the admixtures found to play the most prominent role in their fluidizing effect was the proportion of carboxylate (CG and polyether (EG group components. In cements characteristics such as fineness and the C3A/calcium sulphate and C3S/C3A ratios were also observed to be essential to admixture effectiveness. In this regard, the rheological parameters varied most widely in CEM I 52.5N/SR pastes and least in BL I 52.5R cement pastes. Of the additioned cements, the CEM III/B 32.5R pastes, which contained granulated blast furnace slag, showed the highest rises in flowability. Finally, the fluidizing effect of polycarboxylate superplasticizers was much more intense in calcium aluminate cements, although flowability declined rapidly in this material.El objetivo de este trabajo ha sido estudiar el efecto de las diferencias estructurales de cuatro aditivos basados en policarboxilatos y poliéteres sobre las propiedades reológicas de pastas de cemento con diferente composición química, mineralógica y con distintas adiciones activas (CEM I 42,5 R, CEM I 52,5 R, CEM I 52,5 N/SR, CEM II/AV 42,5R, CEM II/ B-L 32,5 R, CEM III/B 32,5R, BL I 52,5R y CAC - Norma EN 197-1:2000. Los resultados obtenidos sobre la fluidez de la pasta en el ensayo del “Minislump” coinciden con la evolución de los valores de los parámetros reológicos (esfuerzo de

  11. Parenteral Admixture Compatibility in Neurosurgery Ward in Prof. Dr. Margono Soekarjo Regional Public Hospital

    Directory of Open Access Journals (Sweden)

    Laksmi Maharani

    2014-03-01

    Full Text Available Parenteral admixtures (intravenous admixtures have been done commonly in hospitals. However, it has a possibility of failures, like incompatibilities and changes in drug stabilities. The aim of this study was to determine the rate of drug incompatibilities in mixing parenteral preparations in neurosurgery ward in Prof. Dr. Margono Soekarjo Regional Public Hospital which undergo physical incompatibility observed in organoleptic. This study was a prospective descriptive research for one month period. Data were collected and analyzed descriptively. The results showed that from 667 parenteral admixtures in neurosurgery ward in Prof Dr Margono Soekarjo Hospital in February 2010, there were 0.45% potential incompatibility and 2.55% actual incompatibility happened. Actual incompatibility shown as crystal 0.17%, sediment 0.17%, and 2.04% was non-permanent haze in phenytoin and sodium chloride or ringer lactate admixtures.

  12. A Genome-Wide Search for Greek and Jewish Admixture in the Kashmiri Population.

    Science.gov (United States)

    Downie, Jonathan M; Tashi, Tsewang; Lorenzo, Felipe Ramos; Feusier, Julie Ellen; Mir, Hyder; Prchal, Josef T; Jorde, Lynn B; Koul, Parvaiz A

    2016-01-01

    The Kashmiri population is an ethno-linguistic group that resides in the Kashmir Valley in northern India. A longstanding hypothesis is that this population derives ancestry from Jewish and/or Greek sources. There is historical and archaeological evidence of ancient Greek presence in India and Kashmir. Further, some historical accounts suggest ancient Hebrew ancestry as well. To date, it has not been determined whether signatures of Greek or Jewish admixture can be detected in the Kashmiri population. Using genome-wide genotyping and admixture detection methods, we determined there are no significant or substantial signs of Greek or Jewish admixture in modern-day Kashmiris. The ancestry of Kashmiri Tibetans was also determined, which showed signs of admixture with populations from northern India and west Eurasia. These results contribute to our understanding of the existing population structure in northern India and its surrounding geographical areas.

  13. A Genome-Wide Search for Greek and Jewish Admixture in the Kashmiri Population

    Science.gov (United States)

    Tashi, Tsewang; Lorenzo, Felipe Ramos; Feusier, Julie Ellen; Mir, Hyder

    2016-01-01

    The Kashmiri population is an ethno-linguistic group that resides in the Kashmir Valley in northern India. A longstanding hypothesis is that this population derives ancestry from Jewish and/or Greek sources. There is historical and archaeological evidence of ancient Greek presence in India and Kashmir. Further, some historical accounts suggest ancient Hebrew ancestry as well. To date, it has not been determined whether signatures of Greek or Jewish admixture can be detected in the Kashmiri population. Using genome-wide genotyping and admixture detection methods, we determined there are no significant or substantial signs of Greek or Jewish admixture in modern-day Kashmiris. The ancestry of Kashmiri Tibetans was also determined, which showed signs of admixture with populations from northern India and west Eurasia. These results contribute to our understanding of the existing population structure in northern India and its surrounding geographical areas. PMID:27490348

  14. Validation of the polysemen admixture on viability and acrosomal morphology of boar spermatozoa

    Directory of Open Access Journals (Sweden)

    Ogbuewu IP

    2007-07-01

    Full Text Available Semen were collected using artificial vagina (AV, from 5 large white boars aged 2-2.5 years twice a week for 16 weeks in each of the two seasons, early rainy (ER and late rainy (LR seasons, to determine the effects of multiple semen pool admixture on the viability and acrosomal morphology. The semen qualities studied were sperm motility, live sperm and sperm concentration, while the acrosomal parameters includes normal apical ridge (NAR, damaged apical ridge (DAR, missing apical ridge (MAR and loose apical ridge (LAC. There were no significant (P>0.05 seasonal effects. Three-boar semen admixture gave the highest percentage NAR, motility, live sperm concentration and least DAR and LAC, although these were not significantly (P>0.05 different from the 2-boar semen admixture. The result of this study suggests that 3-boar semen admixture is most suitable for use in artificial insemination program.

  15. Profile of Intravenous Admixture Compatibility in the Intensive Care Unit (ICU Patients

    Directory of Open Access Journals (Sweden)

    Sharly Dwijayanti

    2016-06-01

    Full Text Available which may directly impact to the outcome of treatment to the Intensive Care Unit (ICU patients. The objective of this study was to identify the profile of compatibility and incompatibility among IV admixtures given to the ICU patients. This observational research was conducted prospectively to the patients admitted in the ICU at a private hospital in Surabaya from October–December 2014. In this research, compatibility data of IV drug and its solution was compared with drug brochure and Handbook on Injectable Drugs 17th ed (2013 as references to analyze the compatibility of IV admixtures. The admixture between IV drug and its solvent was classified as compatible, incompatible, no information (NI, not applicable (NA, and not clear (NC, using a specific criteria. There were 1.186 IV drug‑solvent admixtures observed in 39 ICU patients. There were no IV drug-solvent admixtures classified as incompatible in both adult and child patients. Most of IV drugs were admixed with compatible solvents (adults: 72.31%; children: 69.84%. However, according to two of IV drugs compatibility references used in this research, there were some IV drug-solvent admixtures with unknown information about its compatibility that were classified as NI (adults: 19.68%; children: 30.16%. There were a few of IV drug-solvent admixtures classified as NA and NC, of 7.48% and 0.53%, respectively. The lack of information related to compatibility and stability of the IV admixtures emphasize the importance to continually monitor patients’ condition and drug concentration.

  16. Influences of a New Admixture MX on Concrete Durability

    Institute of Scientific and Technical Information of China (English)

    MA Baoguo; DONG Rongzhen; ZHU Hongbo; ZHANG Li; ZHONG Kaihong; HE Xingyang; LI Zongjin

    2005-01-01

    The performance of concrete with a new admixture MX was studied by using the freeze-thaw cycle, permeability and chemical attack test. The experimental results show that MX improves the durability of concrete. Within the optimum proportion ranges from 0.1%to 1%,the compressive strength of concrete after freeze-thaw is increased by 20%-50%,and Young's modulus can be increased by 3.76-5.64 times.The strength and weight loss of concrete with 0.4%MX are respectively decreased by 28% and 60% after hydrochloric acid attack.The strength and weight loss of concrete with 0.4% MX are decreased by 5%-20% after sulfuric acid and sodium sulfate attack.The permeability of concrete with 1% MX at 28 days can be decreased by more than 30%. The investigation of the negative temperature property of MX and analysis on concrete composition and microstructure by MIP reveal that the heat conduction is resisted and the freezing procedure of solution in concrete pore is retarded due to the adding of MX. Moreover,the pore structure of concrete with MX is improved, thus improving the durability. Based on this study, a resistance model of MX to block the heat and mass transference was proposed, and the mechanism of durability improvement of concrete with MX was explained.

  17. Admixture into and within sub-Saharan Africa.

    Science.gov (United States)

    Busby, George Bj; Band, Gavin; Si Le, Quang; Jallow, Muminatou; Bougama, Edith; Mangano, Valentina D; Amenga-Etego, Lucas N; Enimil, Anthony; Apinjoh, Tobias; Ndila, Carolyne M; Manjurano, Alphaxard; Nyirongo, Vysaul; Doumba, Ogobara; Rockett, Kirk A; Kwiatkowski, Dominic P; Spencer, Chris Ca

    2016-06-21

    Similarity between two individuals in the combination of genetic markers along their chromosomes indicates shared ancestry and can be used to identify historical connections between different population groups due to admixture. We use a genome-wide, haplotype-based, analysis to characterise the structure of genetic diversity and gene-flow in a collection of 48 sub-Saharan African groups. We show that coastal populations experienced an influx of Eurasian haplotypes over the last 7000 years, and that Eastern and Southern Niger-Congo speaking groups share ancestry with Central West Africans as a result of recent population expansions. In fact, most sub-Saharan populations share ancestry with groups from outside of their current geographic region as a result of gene-flow within the last 4000 years. Our in-depth analysis provides insight into haplotype sharing across different ethno-linguistic groups and the recent movement of alleles into new environments, both of which are relevant to studies of genetic epidemiology.

  18. Research on Development and Performance of Active Admixture

    Institute of Scientific and Technical Information of China (English)

    2006-01-01

    Comparing with that of low-calcium fly ash (LF) or fly dreg (FD), chemical content of high-calcium fly ash (HF) waves more much. Coarse grain, which existing in HF, would determine soundness more seriously than fine one. Grinding it is a simple method to result this problem. Because of with thiner specific surface and higher CaO content, fine grain exhibits higher activity of hydration than coarse one. Activity of active admixture (AF), which is produced by ways of grinding HF together with calcium carbide sludge (CS), desulfurize gypsum (DG), calcine desulfurize gypsum (CG) and NS (Na2SO4+FeSO4), can catch up with that of grinding blast furnace slag (GBFS) powder with about 400 m2/kg specific surface. AF costs lower than GBFS. 20% cement replaced by the equal amount of AF, compression strength of concrete is similar to that control one, and electrifies coulomb of concrete at 90 day's age reduces to about half of control one.

  19. Strong Selection at MHC in Mexicans since Admixture.

    Directory of Open Access Journals (Sweden)

    Quan Zhou

    2016-02-01

    Full Text Available Mexicans are a recent admixture of Amerindians, Europeans, and Africans. We performed local ancestry analysis of Mexican samples from two genome-wide association studies obtained from dbGaP, and discovered that at the MHC region Mexicans have excessive African ancestral alleles compared to the rest of the genome, which is the hallmark of recent selection for admixed samples. The estimated selection coefficients are 0.05 and 0.07 for two datasets, which put our finding among the strongest known selections observed in humans, namely, lactase selection in northern Europeans and sickle-cell trait in Africans. Using inaccurate Amerindian training samples was a major concern for the credibility of previously reported selection signals in Latinos. Taking advantage of the flexibility of our statistical model, we devised a model fitting technique that can learn Amerindian ancestral haplotype from the admixed samples, which allows us to infer local ancestries for Mexicans using only European and African training samples. The strong selection signal at the MHC remains without Amerindian training samples. Finally, we note that medical history studies suggest such a strong selection at MHC is plausible in Mexicans.

  20. A Novel Admixture-Based Pharmacogenetic Approach to Refine Warfarin Dosing in Caribbean Hispanics.

    Directory of Open Access Journals (Sweden)

    Jorge Duconge

    Full Text Available This study is aimed at developing a novel admixture-adjusted pharmacogenomic approach to individually refine warfarin dosing in Caribbean Hispanic patients.A multiple linear regression analysis of effective warfarin doses versus relevant genotypes, admixture, clinical and demographic factors was performed in 255 patients and further validated externally in another cohort of 55 individuals.The admixture-adjusted, genotype-guided warfarin dosing refinement algorithm developed in Caribbean Hispanics showed better predictability (R2 = 0.70, MAE = 0.72mg/day than a clinical algorithm that excluded genotypes and admixture (R2 = 0.60, MAE = 0.99mg/day, and outperformed two prior pharmacogenetic algorithms in predicting effective dose in this population. For patients at the highest risk of adverse events, 45.5% of the dose predictions using the developed pharmacogenetic model resulted in ideal dose as compared with only 29% when using the clinical non-genetic algorithm (p<0.001. The admixture-driven pharmacogenetic algorithm predicted 58% of warfarin dose variance when externally validated in 55 individuals from an independent validation cohort (MAE = 0.89 mg/day, 24% mean bias.Results supported our rationale to incorporate individual's genotypes and unique admixture metrics into pharmacogenetic refinement models in order to increase predictability when expanding them to admixed populations like Caribbean Hispanics.ClinicalTrials.gov NCT01318057.

  1. High-resolution 3-D mapping using terrestrial laser scanning as a tool for geomorphological and speleogenetical studies in caves: An example from the Lessini mountains (North Italy)

    Science.gov (United States)

    Fabbri, Stefano; Sauro, Francesco; Santagata, Tommaso; Rossi, Guido; De Waele, Jo

    2017-03-01

    Terrestrial laser scanning (TLS) is increasingly used in geomorphology for the study of medium- to small scale landforms. A light weight, compact and portable TLS device has been used in the Grotta A Cave (Mt. Lessini, N Italy) to make a detailed 3D model of the underground environment. A total of 16 scans were used to survey the about 150 m long cave in < 6 h. The 3D model of the cave walls makes it possible to carry out morphometric measurements on the different cave environments. The TLS data allowed us to calculate cave volumes and distinguish cupola, phreatic conduit and basalt dike volumes. Wall roughness analysis also allowed recognising smaller-scale morphologies such as megascallops, differential corrosion forms and mineral crusts. These observations have enabled us to discern between different karstification processes and speleogenetic phases, highlighting the importance of condensation-corrosion on the cave passage enlargement in a quantitative way.

  2. Extensive Admixture and Selective Pressure Across the Sahel Belt.

    Science.gov (United States)

    Triska, Petr; Soares, Pedro; Patin, Etienne; Fernandes, Veronica; Cerny, Viktor; Pereira, Luisa

    2015-11-26

    Genome-wide studies of African populations have the potential to reveal powerful insights into the evolution of our species, as these diverse populations have been exposed to intense selective pressures imposed by infectious diseases, diet, and environmental factors. Within Africa, the Sahel Belt extensively overlaps the geographical center of several endemic infections such as malaria, trypanosomiasis, meningitis, and hemorrhagic fevers. We screened 2.5 million single nucleotide polymorphisms in 161 individuals from 13 Sahelian populations, which together with published data cover Western, Central, and Eastern Sahel, and include both nomadic and sedentary groups. We confirmed the role of this Belt as a main corridor for human migrations across the continent. Strong admixture was observed in both Central and Eastern Sahelian populations, with North Africans and Near Eastern/Arabians, respectively, but it was inexistent in Western Sahelian populations. Genome-wide local ancestry inference in admixed Sahelian populations revealed several candidate regions that were significantly enriched for non-autochthonous haplotypes, and many showed to be under positive selection. The DARC gene region in Arabs and Nubians was enriched for African ancestry, whereas the RAB3GAP1/LCT/MCM6 region in Oromo, the TAS2R gene family in Fulani, and the ALMS1/NAT8 in Turkana and Samburu were enriched for non-African ancestry. Signals of positive selection varied in terms of geographic amplitude. Some genomic regions were selected across the Belt, the most striking example being the malaria-related DARC gene. Others were Western-specific (oxytocin, calcium, and heart pathways), Eastern-specific (lipid pathways), or even population-restricted (TAS2R genes in Fulani, which may reflect sexual selection).

  3. Implications of the Admixture Process in Skin Color Molecular Assessment

    Science.gov (United States)

    de Cerqueira, Caio Cesar Silva; Hünemeier, Tábita; Gomez-Valdés, Jorge; Ramallo, Virgínia; Volasko-Krause, Carla Daiana; Barbosa, Ana Angélica Leal; Vargas-Pinilla, Pedro; Dornelles, Rodrigo Ciconet; Longo, Danaê; Rothhammer, Francisco; Bedoya, Gabriel; Canizales-Quinteros, Samuel; Acuña-Alonzo, Victor; Gallo, Carla; Poletti, Giovanni; González-José, Rolando; Salzano, Francisco Mauro; Callegari-Jacques, Sídia Maria; Schuler-Faccini, Lavínia; Ruiz-Linares, Andrés; Cátira Bortolini, Maria

    2014-01-01

    The understanding of the complex genotype-phenotype architecture of human pigmentation has clear implications for the evolutionary history of humans, as well as for medical and forensic practices. Although dozens of genes have previously been associated with human skin color, knowledge about this trait remains incomplete. In particular, studies focusing on populations outside the European-North American axis are rare, and, until now, admixed populations have seldom been considered. The present study was designed to help fill this gap. Our objective was to evaluate possible associations of 18 single nucleotide polymorphisms (SNPs), located within nine genes, and one pseudogene with the Melanin Index (MI) in two admixed Brazilian populations (Gaucho, N = 352; Baiano, N = 148) with different histories of geographic and ethnic colonization. Of the total sample, four markers were found to be significantly associated with skin color, but only two (SLC24A5 rs1426654, and SLC45A2 rs16891982) were consistently associated with MI in both samples (Gaucho and Baiano). Therefore, only these 2 SNPs should be preliminarily considered to have forensic significance because they consistently showed the association independently of the admixture level of the populations studied. We do not discard that the other two markers (HERC2 rs1129038 and TYR rs1126809) might be also relevant to admixed samples, but additional studies are necessary to confirm the real importance of these markers for skin pigmentation. Finally, our study shows associations of some SNPs with MI in a modern Brazilian admixed sample, with possible applications in forensic genetics. Some classical genetic markers in Euro-North American populations are not associated with MI in our sample. Our results point out the relevance of considering population differences in selecting an appropriate set of SNPs as phenotype predictors in forensic practice. PMID:24809478

  4. Stability investigation of total parenteral nutrition admixture prepared in a hospital pharmacy

    Directory of Open Access Journals (Sweden)

    Mirković Dušica

    2008-01-01

    Full Text Available Background/Aim. In the cases when nutrition of patients can not be orally nor enterally performed, parenteral nutrition is a method of the therapy that provides more successful and rapid recovery. In that way, hospitalization can be significantly shorter, healing costs reduced and mortality minimized. Total parenteral nutrition (TPN admixtures are the most complex systems which contain amino acids, carbohydrates, lipid emulsion, macroelectrolytes (Na+, K+, Ca2+, Mg2+, Cl-, SO42-, PO43-, oligoelements, hydro- and liposoluble vitamines, heparin, insulin and water. Concerning the mentioned complexity, special attention should be payed to physicochemical and microbiological stability of a mixture, because of interactions among components, that can be very hard to analyze. The aim of this study was to investigate the problem of stability of TPN admixtures prepared in a hospital pharmacy. Methods. Admixture TPN was aseptically prepared in laminar air - flow environment on the basis of the specified order in supplementing components and additives to basic solutions. Solutions were kept in sterile multicompartment ethylene-vinyl-acetate bags. After preparation and slow homogenization, TPN admixtures were submitted to physicochemical and microbiological stability analyses in various period of time. The assessment of physical stability of TPN admixture was done on the basis of visual inspection, determination of pH value and measuring of particle size. The investigation of sterility and pyrogenic test were performed according to Ph. Yug. V regulations. Results. Physico-chemical and microbiological analyses were applied and no significant changes in visual sense, pH value and droplet size stability of the TPN admixture were observed during the period of 60 hours. The lipid droplets were smaller in size than 5 μm, that is the most common pharmacopoeia requirement. Conclusion. The results of our study confirmed that a TPN admixture prepared in a hospital

  5. Porosity Parameters Of Cement Stone Containing Chemical Admixtures Of Different Purpose

    Directory of Open Access Journals (Sweden)

    Lukas Venčkauskas

    2013-12-01

    Full Text Available The conducted research has established a complex influenceand the impact of separate chemical admixtures of differentpurpose on the parameters of the porosity of hardened cementpaste such as open and closed porosity, the average size of poresand the rates of pore inequality. According to the parametersof the porosity of hardened cement paste, on the basis of A. E.Sheikin’s methodology, the number of freezing-thawing cycleswas predicted. This research used plasticizing, viscosity modifyingand antifoaming admixtures. It has been found that, when theamount of plasticizing admixture in cement paste (W/C–0.45 isconstant and makes 1.1% of the cement mass, and the amountof viscosity modifying and antifoaming the admixture increasesfrom 0.1 to 0.6% and from 0.05 to 0.3% respectively, the openporosity of hardened cement paste varies between 30.21% and31.06%, while closed porosity varies between 5.39% and 6.22%.When the amount of the plasticizing admixture in cement paste(W/C–0.45 exceeds 1.1% of the cement mass, the open porosityof hardened cement paste increases by 1.4 times and closedporosity decreases by 2.5 times. While adding 0.1% of the viscositymodifying admixture to cement paste, the open porosityof hardened cement paste is increased by 1.5 times and closedporosity decreases by 2.4 times. The amount of 0.05% of thecement mass of the antifoaming admixture results in the increasedopen porosity of hardened cement paste by 1.5 times and reducedclosed porosity by 3.5 times.

  6. Study of the mapping mechanism of ferroelectric domains with the scanning force microscope; Untersuchung der Abbildungsmechanismen ferroelektrischer Domaenen mit dem Rasterkraftmikroskop

    Energy Technology Data Exchange (ETDEWEB)

    Jungk, T.

    2006-12-15

    The piezo-force microscopy (PFM) allows the mapping of ferroelectric domains until the nanometer range. In spite of its simple function principle it was hitherto not completely understood. In ordser to develop the PFM further to a quantitative analysis method its methodical aspects were analyzed. It was shown that the fundamental mapping mechanism is based on the inverse piezo-effect. Different artefacts to be found in the literature could therefore be reduced to a measurement background. Furthermore the influence of the electrode geometry was analyzed. The width of doamin walls was systematically measured and simulated with a mode, whereby a maximal resolution of 17 nm was reached. By the development of a correction procedure for the exact detection of the forces acting on the spring-beam the lateral signals measured on domain walls could by newly interpreted. So the ''Lateral Electrostatic Force Microscopy'' was developed.

  7. MRI Scans

    Science.gov (United States)

    Magnetic resonance imaging (MRI) uses a large magnet and radio waves to look at organs and structures inside your body. Health care professionals use MRI scans to diagnose a variety of conditions, from ...

  8. ADSORPTION OF CHROMIUM (VI FROM AQUEOUS SOLUTIONS BY DIFFERENT ADMIXTURES – A BATCH EQUILIBRIUM TEST STUDY

    Directory of Open Access Journals (Sweden)

    K. SHIVA PRASHANTH KUMAR

    2014-08-01

    Full Text Available Wide variety of inorganic compounds such as nutrients and trace metals, organic chemicals, radioactive contaminants and pathogens are commonly present as contaminants in the groundwater. Migration of contaminants in soil involves important mechanisms such as molecular diffusion, dispersion under physical processes, adsorption, precipitation and oxidation - reduction under chemical processes and biodegradation under biological process. Cr (VI is a major and dangerous contaminant as per the ground water is concerned. There are numerous research work carried out with concentrated efforts by the researchers towards removal of Cr (VI contaminant from aqueous solutions. There are few studies relevant to Cr (VI removal with respect to utilization of low cost admixtures and also soil type. In the present study, different low cost admixtures like rice husk (RH, shredded tyre (ST and fly ash (FA are used to understand the performance in removal of Cr (VI from aqueous solution and also two different soil types are used along with the admixture. The results are discussed in terms of sorption capacity and performance of individual admixture and combination of admixture with soil in removal of contaminant. The fly ash, rice husk and shredded tyre admixtures are used and the results revealed that the shredded tyre showed higher performance in removal of contaminant concentration. Also, the soil which has more fine particle content (size<0.075 mm IS sieve showed reasonable reduction in concentration of contaminant at the lower levels of contaminant initial concentration. The sorption capacity results of Cr (VI contaminant, treated with various admixtures are further validated with the published work of other investigators. The shredded tyre (ST showed more adsorption capacity, i.e., 3.283 mg/g at pH of 4.8. For other admixtures, adsorption capacity value is varying in the range of 0.07 mg/g to 1.7 mg/g. Only in case of activated alumina and modified saw dust

  9. Scanning Quantum Decoherence Microscopy

    OpenAIRE

    2008-01-01

    The use of qubits as sensitive magnetometers has been studied theoretically and recent demonstrated experimentally. In this paper we propose a generalisation of this concept, where a scanning two-state quantum system is used to probe the subtle effects of decoherence (as well as its surrounding electromagnetic environment). Mapping both the Hamiltonian and decoherence properties of a qubit simultaneously, provides a unique image of the magnetic (or electric) field properties at the nanoscale....

  10. Mechanical Characteristics of Hardened Concrete with Different Mineral Admixtures: A Review

    Science.gov (United States)

    2014-01-01

    The available literature identifies that the addition of mineral admixture as partial replacement of cement improves the microstructure of the concrete (i.e., porosity and pore size distribution) as well as increasing the mechanical characteristics such as drying shrinkage and creep, compressive strength, tensile strength, flexural strength, and modulus of elasticity; however, no single document is available in which review and comparison of the influence of the addition of these mineral admixtures on the mechanical characteristics of the hardened pozzolanic concretes are presented. In this paper, based on the reported results in the literature, mechanical characteristics of hardened concrete partially containing mineral admixtures including fly ash (FA), silica fume (SF), ground granulated blast furnace slag (GGBS), metakaolin (MK), and rice husk ash (RHA) are discussed and it is concluded that the content and particle size of mineral admixture are the parameters which significantly influence the mechanical properties of concrete. All mineral admixtures enhance the mechanical properties of concrete except FA and GGBS which do not show a significant effect on the strength of concrete at 28 days; however, gain in strength at later ages is considerable. Moreover, the comparison of the mechanical characteristics of different pozzolanic concretes suggests that RHA and SF are competitive. PMID:24688443

  11. Population evolution in 20th-century Easter Island: endogamy and admixture.

    Science.gov (United States)

    Hernández, M; García-Moro, C; Moral, P; González-Martín, A

    2000-04-01

    We studied the 20th-century evolution of the Rapanui population of Easter Island, the most geographically isolated in the world, to analyze the current process of admixture. Using parochial birth records, we determined origin of the birth parents based on their surnames. The origin of parents reveals two stages of population evolution: endogamy, due to the isolation of the island, but with a strong rejection of isonymous marriages; and admixture, beginning in 1965 with the opening of the island to the rest of the world. We used Lasker's coefficient (Lasker's Ri) and the Shannon-Weaver coefficient of diversity (H) to characterize both stages. The gene flow evaluated from admixture has increased significantly since 1965. Births from exogamous unions represented 3.5% of total births from 1937 to 1965. increased to 43.2% between 1966 and 1980, and constituted 50.8% of all births between 1981 and 1996.

  12. Portland cement hydration in the presence of admixtures: black gram pulse and superplasticizer

    Directory of Open Access Journals (Sweden)

    Viveka Nand Dwivedi

    2008-12-01

    Full Text Available Effect of admixtures such as black gram pulse (BGP and sulfonated naphthalene based superplasticizer (SP on the hydration of Portland cement has been studied. The hydration characteristics of OPC in the presence of BGP and SP were studied with the help of non evaporable water content determinations, calorimetric method, Mössbauer spectroscopic and atomic force microscopic techniques. Results have shown that both BGP and SP get adsorbed at the surface of cement and its hydration products. The hydration of Portland cement is retarded in the presence of both the admixtures and nanosize hydration products are formed.

  13. Scan Statistics

    CERN Document Server

    Glaz, Joseph

    2009-01-01

    Suitable for graduate students and researchers in applied probability and statistics, as well as for scientists in biology, computer science, pharmaceutical science and medicine, this title brings together a collection of chapters illustrating the depth and diversity of theory, methods and applications in the area of scan statistics.

  14. Properties of Ca-rich and Mg-rich carbonate films on dolomite: implications for compositional surface mapping with scanning force microscopy.

    Science.gov (United States)

    Hu, Xiaoming; Cubillas, Pablo; Higgins, Steven R

    2010-04-06

    A self-limited monolayer grown on dolomite (CaMg(CO(3))(2)), showing distinct friction contrast with the substrate as reported earlier using lateral force microscopy, was investigated with in situ atomic force microscopy (AFM) adhesion mapping and force-modulation techniques. Force-modulation microscopy revealed lower stiffness on a Ca-rich film in comparison to that on the dolomite surface. The friction contrast therefore results from a larger tip-surface contact area when the AFM probe is in contact with the Ca-rich film as opposed to the contact area with dolomite. The Ca-rich film also exhibited a slightly higher adhesion than did the dolomite substrate; however, the critical shear stresses for the two tip-surface contacts were indistinguishable. A comparative study with a Mg-rich film did not yield noticeable force modulation contrast, indicating similar surface stiffness of the film and the dolomite surface. The similarity in these stiffness quantities was further corroborated by friction-load data that demonstrated similar friction forces on the two surfaces. The previously reported film strain in the Ca-rich system is likely linked to the lower stiffness observed, with both of these properties related to the Ca/Mg composition of the film.

  15. Elemental mapping in a contemporary miniature by full-field X-ray fluorescence imaging with gaseous detector vs. scanning X-ray fluorescence imaging with polycapillary optics

    Science.gov (United States)

    Silva, A. L. M.; Cirino, S.; Carvalho, M. L.; Manso, M.; Pessanha, S.; Azevedo, C. D. R.; Carramate, L. F. N. D.; Santos, J. P.; Guerra, M.; Veloso, J. F. C. A.

    2017-03-01

    Energy dispersive X-ray imaging can be used in several research fields and industrial applications. Elemental mapping through energy dispersive X-ray imaging technique has become a promising method to obtain positional distribution of specific elements in a non-destructive way. To obtain the elemental distribution of a sample it is necessary to use instruments capable of providing a precise positioning together with a good energy resolution. Polycapillary beams together with silicon drift chamber detectors are used in several commercial systems and are considered state-of-the-art spectrometers, however they are usually very costly. A new concept of large energy dispersive X-ray imaging systems based on gaseous radiation detectors emerged in the last years enabling a promising 2D elemental detection at a very reduced price. The main goal of this work is to analyze a contemporary Indian miniature with both X-ray fluorescence imaging systems, the one based on a gaseous detector 2D-THCOBRA and the state-of-the-art spectrometer M4 Tornado, from Bruker. The performance of both systems is compared and evaluated in the context of the sample's analysis.

  16. Iron, copper, zinc and bromine mapping in cirrhotic liver slices from patients with hemochromatosis studied by microscopic synchrotron radiation X-ray fluorescence analysis in continuous scanning mode

    Energy Technology Data Exchange (ETDEWEB)

    Osterode, W. [Medizinische Universitaet Wien, Univ. Klinik fuer Innere Medizin IV, Klinische Abteilung fuer Arbeitsmedizin, Waehringer Guertel 18-20, A-1090 Wien (Austria)], E-mail: wolf.osterode@meduniwien.ac.at; Falkenberg, G. [Hamburger Synchrotronstrahlungslabor HASYLAB, Deutsches Elektronen-Synchrotron DESY (Germany); Hoeftberger, R. [Medizinische Universitaet Wien, Klinisches Institut fuer Neurologie (Austria); Wrba, F. [Medizinische Universitaet Wien, Klinisches Institut fuer Klinische Pathologie (Austria)

    2007-07-15

    Iron (Fe) and copper (Cu) are essential metals in physiological cell metabolism. While Fe is easy to determine biochemically in histological slices, Cu and zinc (Zn) distribution is frequently critical in confirming the presence of an overload in disturbed Fe/Cu metabolism. To analyze Fe, Cu and Zn in a near histological resolution, energy dispersive microscopic synchrotron radiation X-ray fluorescence was applied. In normal liver tissue, after fixation and imbedding in paraffin, mean Fe, Cu and Zn concentrations were 152 {+-} 54, 20.1 {+-} 4.3 and 88.919.5 {mu}g/g sample weight, respectively. No substantial, characteristic differences in their distribution were found in the two-dimensional scans. In slices from patients with hemochromatosis mean Fe, Cu and Zn concentrations were 1102 {+-} 539, 35.9 {+-} 14.6 and 27.2 {+-} 6.7 {mu}g/g sample weight, respectively. Additionally, a significant decrease in phosphorus and sulphur concentrations existed. An increased Cu around cirrhotic regenerations nodules is mostly associated with a lymphocytic infiltration in this region. Analyzing concentrations of Fe in different regions of the samples show a clear negative dependency between Fe and Cu, Cu and Zn, but a positive one between Fe and Zn. Conclusion: With a focal beam size of 15 {mu}m in diameter a resolution of the elemental distribution was achieved which is widely comparable with stained histological slices (20x light microscope). The analysis of simultaneous determined elements reveals metabolic differences between Fe, Cu and Zn in liver tissue from patients with hemochromatosis.

  17. Iron, copper, zinc and bromine mapping in cirrhotic liver slices from patients with hemochromatosis studied by microscopic synchrotron radiation X-ray fluorescence analysis in continuous scanning mode

    Science.gov (United States)

    Osterode, W.; Falkenberg, G.; Höftberger, R.; Wrba, F.

    2007-07-01

    Iron (Fe) and copper (Cu) are essential metals in physiological cell metabolism. While Fe is easy to determine biochemically in histological slices, Cu and zinc (Zn) distribution is frequently critical in confirming the presence of an overload in disturbed Fe/Cu metabolism. To analyze Fe, Cu and Zn in a near histological resolution, energy dispersive microscopic synchrotron radiation X-ray fluorescence was applied. In normal liver tissue, after fixation and imbedding in paraffin, mean Fe, Cu and Zn concentrations were 152 ± 54, 20.1 ± 4.3 and 88.919.5 μg/g sample weight, respectively. No substantial, characteristic differences in their distribution were found in the two-dimensional scans. In slices from patients with hemochromatosis mean Fe, Cu and Zn concentrations were 1102 ± 539, 35.9 ± 14.6 and 27.2 ± 6.7 μg/g sample weight, respectively. Additionally, a significant decrease in phosphorus and sulphur concentrations existed. An increased Cu around cirrhotic regenerations nodules is mostly associated with a lymphocytic infiltration in this region. Analyzing concentrations of Fe in different regions of the samples show a clear negative dependency between Fe and Cu, Cu and Zn, but a positive one between Fe and Zn. Conclusion: With a focal beam size of 15 μm in diameter a resolution of the elemental distribution was achieved which is widely comparable with stained histological slices (20× light microscope). The analysis of simultaneous determined elements reveals metabolic differences between Fe, Cu and Zn in liver tissue from patients with hemochromatosis.

  18. Genome-scan analysis for genetic mapping of quantitative trait loci underlying birth weight and onset of puberty in doe kids (Capra hircus).

    Science.gov (United States)

    Esmailizadeh, A K

    2014-12-01

    The objective of this study was to locate quantitative trait loci (QTL) causing variation in birth weight and age of puberty of doe kids in a population of Rayini cashmere goats. Four hundred and thirty kids from five half-sib families were genotyped for 116 microsatellite markers located on the caprine autosomes. The traits recorded were birth weight of the male and female kids, body weight at puberty, average daily gain from birth to age of puberty and age at puberty of the doe kids. QTL analysis was conducted using the least squares interval mapping approach. Linkage analysis indicated significant QTL for birth weight on Capra hircus chromosomes (CHI) 4, 5, 6, 18 and 21. Five QTL located on CHI 5, 14 and 29 were associated with age at puberty. Across-family analysis revealed evidence for overlapping QTL affecting birth weight (78 cM), body weight at puberty (72 cM), average daily gain from birth to age of puberty (72 cM) and age at puberty (76 cM) on CHI 5 and overlapping QTL controlling body weight at puberty and age at puberty on CHI 14 at 18-19 cM. The proportion of the phenotypic variance explained by the detected QTL ranged between 7.9% and 14.4%. Confirming some of the previously reported results for birth weight and growth QTL in goats, this study identified more QTL for these traits and is the first report of QTL for onset of puberty in doe kids.

  19. Head CT scan

    Science.gov (United States)

    Brain CT; Cranial CT; CT scan - skull; CT scan - head; CT scan - orbits; CT scan - sinuses; Computed tomography - cranial; CAT scan - brain ... hold your breath for short periods. A complete scan usually take only 30 seconds to a few ...

  20. Rare earth metals appliance for magnetic admixtures recovery from mineral premixes

    Directory of Open Access Journals (Sweden)

    A. A. Shevtsov

    2012-01-01

    Full Text Available The analysis of the material composition metallomagnetic admixtures of mineral premix. It is shown that the dressed metallomagnetic impurity includes low-magnetic particles with low magnetic susceptibility. Removing these particles from the product stream in process of magnetic separation using high-energy rare earth magnets is a challenging task.

  1. The scale and nature of Viking settlement in Ireland from Y-chromosome admixture analysis.

    Science.gov (United States)

    McEvoy, Brian; Brady, Claire; Moore, Laoise T; Bradley, Daniel G

    2006-12-01

    The Vikings (or Norse) played a prominent role in Irish history but, despite this, their genetic legacy in Ireland, which may provide insights into the nature and scale of their immigration, is largely unexplored. Irish surnames, some of which are thought to have Norse roots, are paternally inherited in a similar manner to Y-chromosomes. The correspondence of Scandinavian patrilineal ancestry in a cohort of Irish men bearing surnames of putative Norse origin was examined using both slow mutating unique event polymorphisms and relatively rapidly changing short tandem repeat Y-chromosome markers. Irish and Scandinavian admixture proportions were explored for both systems using six different admixture estimators, allowing a parallel investigation of the impact of method and marker type in Y-chromosome admixture analysis. Admixture proportion estimates in the putative Norse surname group were highly consistent and detected little trace of Scandinavian ancestry. In addition, there is scant evidence of Scandinavian Y-chromosome introgression in a general Irish population sample. Although conclusions are largely dependent on the accurate identification of Norse surnames, the findings are consistent with a relatively small number of Norse settlers (and descendents) migrating to Ireland during the Viking period (ca. AD 800-1200) suggesting that Norse colonial settlements might have been largely composed of indigenous Irish. This observation adds to previous genetic studies that point to a flexible Viking settlement approach across North Atlantic Europe.

  2. Population admixture, biological invasions and the balance between local adaptation and inbreeding depression

    NARCIS (Netherlands)

    Verhoeven, K.J.F.; Macel, M.; Wolfe, L.M.; Biere, A.

    2011-01-01

    When previously isolated populations meet and mix, the resulting admixed population can benefit from several genetic advantages, including increased genetic variation, the creation of novel genotypes and the masking of deleterious mutations. These admixture benefits are thought to play an important

  3. Sex-specific genetic admixture of Mestizos, Amerindian Kichwas, and Afro-Ecuadorans from Ecuador.

    Science.gov (United States)

    González-Andrade, Fabricio; Sánchez, Dora; González-Solórzano, Jorge; Gascón, Santiago; Martínez-Jarreta, Begoña

    2007-02-01

    Three main ethnic groups live in the South American country of Ecuador: Mestizos, Amerindian natives, and African-derived populations, or Afro-Ecuadorans. Mestizos and Afro-Ecuadorans can be considered trihybrid populations containing genes originating in the Americas, Europe, and Africa, as is the case with equivalent populations in other Latin American countries. The proportion and the dynamics of the admixture process remain unknown. However, a certain sex asymmetry of the admixture process can be expected for historical reasons. We typed 11 Y-chromosome short tandem repeats (STRs) in these three ethnic groups to provide adequate allele and haplotype frequencies for forensic genetic purposes and to quantify admixture proportions in male lineages. In addition, a data set of 15 autosomal STRs in the same samples were reanalyzed for the same purpose. Contributions to Mestizo Y chromosomes were estimated to be 70% European, 28% Amerindian, and 2% African, whereas in autosomes the contributions were 19%, 73%, and 8%, respectively, which underlines the sexual asymmetry in mating, with Europeans contributing mostly males. European Y-chromosome haplotypes in Mestizos were similar to those in Spain. Moreover, about 10% of European Y chromosomes were found in the Amerindian Kichwa. As for Afro-Ecuadorans, their contributions to the male line are 44% African, 31% European, and 15% Native American; the last value is the highest percentage reported so far for an African-derived American group. Autosomal admixture was estimated as 56% African, 16% European, and 28% Amerindian.

  4. Diffusion Decay Coefficient for Chloride Ions of Concrete Containing Mineral Admixtures

    Directory of Open Access Journals (Sweden)

    Jae-Im Park

    2016-01-01

    Full Text Available The diffusion coefficient for chloride ions and the diffusion decay coefficient for chloride ions are essential variables for a service life evaluation of concrete structures. They are influenced by water-binder ratio, exposure condition, curing temperature, cement type, and the type and use of mineral admixture. Mineral admixtures such as ground granulated blast furnace slag, fly ash, and silica fume have been increasingly used to improve resistance against chloride ions penetration in concrete structures built in an offshore environment. However, there is not enough measured data to identify the statistical properties of diffusion decay coefficient for chloride ions in concrete using mineral admixtures. This paper is aimed at evaluating the diffusion decay coefficient for chloride ions of concrete using ordinary Portland cement or blended cement. NT BUILD 492 method, an electrophoresis experiment, was used to measure the diffusion coefficient for chloride ions with ages. It was revealed from the test results that the diffusion decay coefficient for chloride ions was significantly influenced by W/B and the replacement ratio of mineral admixtures.

  5. Laser Scanning Applications in Fluvial Geomorphology

    Science.gov (United States)

    Alho, P.

    2014-12-01

    During recent decades, the use of high-resolution laser scanning data in fluvial studies has rapidly increased. Airborne laser scanning (ALS) can be used to extensively map riverine topography. Laser scanning data have great potential to improve the effectiveness of topographical data acquisition and the accuracy and resolution of DTMs (Digital Terrain Models) needed in fluvial geomorphology. Airborne Laser Scanning (ALS) is applicable for mapping areas varying from reach to catchment scale and these data are, therefore, particularly suitable, especially for hydraulic modelling, mapping of flood inundation, and the detection of macro-scale fluvial geomorphology. With Terrestrial Laser Scanning (TLS) a spatial resolution of less than 1 mm and a range accuracy of few millimetres can be achieved. Mobile Laser Scanning (MLS) enables a remarkably faster survey approach compared to the conventional TLS method. One of the newest applications of MLS approaches involves a boat/cart/backpack -based mobile mapping system. This set-up includes laser scanning and imaging from a platform moving along a river course or floodplain and may be used to expand the spatial extent of terrestrial scanning. Detailed DTMs derived from laser scanning data can be used to improve the recognition of fluvial landforms, the geometric data of hydraulic modelling, and the estimation of flood inundation extents and the associated fluvial processes. Fluvial environments also offer challenges for the application of laser scanning techniques. Factors such as vegetation cover, terrain undulation, coarse surface materials and water surfaces may distort a laser scanning survey.

  6. On the integration of Airborne full-waveform laser scanning and optical imagery for Site Detection and Mapping: Monteserico study case

    Science.gov (United States)

    Coluzzi, R.; Guariglia, A.; Lacovara, B.; Lasaponara, R.; Masini, N.

    2009-04-01

    This paper analyses the capability of airborne LiDAR derived data in the recognition of archaeological marks. It also evaluates the benefits to integrate them with aerial photos and very high resolution satellite imagery. The selected test site is Monteserico, a medieval village located on a pastureland hill in the North East of Basilicata (Southern Italy). The site, attested by documentary sources beginning from the 12th century, was discovered by aerial survey in 1996 [1] and investigated in 2005 by using QuickBird imagery [2]. The only architectural evidence is a castle, built on the western top of the hill; whereas on the southern side, earthenware, pottery and crumbling building materials, related to the medieval settlement, could be observed. From a geological point of view, the stratigraphic sequence is composed of Subappennine Clays, Monte Marano sands and Irsina conglomerates. Sporadic herbaceous plants grow over the investigated area. For the purpose of this study, a full-waveform laser scanning with a 240.000 Hz frequency was used. The average point density value of dataset is about 30 points/m2. The final product is a 0.30 m Digital Surface Models (DSMs) accurately modelled. To derive the DSM the point cloud of the ALS was filtered and then classified by applying appropriate algorithms. In this way surface relief and archaeological features were surveyed with great detail. The DSM was compared with other remote sensing data source such as oblique and nadiral aerial photos and QuickBird imagery, acquired in different time. In this way it was possible to evaluate, compare each other and overlay the archaeological features recorded from each data source (aerial, satellite and lidar). Lidar data showed some interesting results. In particular, they allowed for identifying and recording differences in height on the ground produced by surface and shallow archaeological remains (the so-called shadow marks). Most of these features are visible also by the optical

  7. The influence of admixture and consanguinity on population genetic diversity in Middle East.

    Science.gov (United States)

    Yang, Xiong; Al-Bustan, Suzanne; Feng, Qidi; Guo, Wei; Ma, Zhiming; Marafie, Makia; Jacob, Sindhu; Al-Mulla, Fahd; Xu, Shuhua

    2014-11-01

    The Middle East (ME) is an important crossroad where modern humans migrated 'out of Africa' and spread into Europe and Asia. After the initial peopling and long-term isolation leading to well-differentiated populations, the ME also had a crucial role in subsequent human migrations among Africa, Europe and Asia; thus, recent population admixture has been common in the ME. On the other hand, consanguinity, a well-known practice in the ME, often reduces genetic diversity and works in opposition to admixture. Here, we explored the degree to which admixture and consanguinity jointly affected genetic diversity in ME populations. Genome-wide single-nucleotide polymorphism data were generated in two representative ME populations (Arabian and Iranian), with comparisons made with populations worldwide. Our results revealed an overall higher genetic diversity in both ME populations relative to other non-African populations. We identified a much larger number of long runs of homozygosity in ME populations than in any other populations, which was most likely attributed to high levels of consanguineous marriages that significantly decreased both individual and population heterozygosity. Additionally, we were able to distinguish African, European and Asian ancestries in ME populations and quantify the impact of admixture and consanguinity with statistical approaches. Interestingly, genomic regions with significantly excessive ancestry from individual source populations are functionally enriched in olfactory pathways, which were suspected to be under natural selection. Our findings suggest that genetic admixture, consanguinity and natural selection have collectively shaped the genetic diversity of ME populations, which has important implications in both evolutionary studies and medical practices.

  8. The Role of Recent Admixture in Forming the Contemporary West Eurasian Genomic Landscape

    Science.gov (United States)

    Busby, George B.J.; Hellenthal, Garrett; Montinaro, Francesco; Tofanelli, Sergio; Bulayeva, Kazima; Rudan, Igor; Zemunik, Tatijana; Hayward, Caroline; Toncheva, Draga; Karachanak-Yankova, Sena; Nesheva, Desislava; Anagnostou, Paolo; Cali, Francesco; Brisighelli, Francesca; Romano, Valentino; Lefranc, Gerard; Buresi, Catherine; Ben Chibani, Jemni; Haj-Khelil, Amel; Denden, Sabri; Ploski, Rafal; Krajewski, Pawel; Hervig, Tor; Moen, Torolf; Herrera, Rene J.; Wilson, James F.; Myers, Simon; Capelli, Cristian

    2015-01-01

    Summary Over the past few years, studies of DNA isolated from human fossils and archaeological remains have generated considerable novel insight into the history of our species. Several landmark papers have described the genomes of ancient humans across West Eurasia, demonstrating the presence of large-scale, dynamic population movements over the last 10,000 years, such that ancestry across present-day populations is likely to be a mixture of several ancient groups [1, 2, 3, 4, 5, 6, 7]. While these efforts are bringing the details of West Eurasian prehistory into increasing focus, studies aimed at understanding the processes behind the generation of the current West Eurasian genetic landscape have been limited by the number of populations sampled or have been either too regional or global in their outlook [8, 9, 10, 11]. Here, using recently described haplotype-based techniques [11], we present the results of a systematic survey of recent admixture history across Western Eurasia and show that admixture is a universal property across almost all groups. Admixture in all regions except North Western Europe involved the influx of genetic material from outside of West Eurasia, which we date to specific time periods. Within Northern, Western, and Central Europe, admixture tended to occur between local groups during the period 300 to 1200 CE. Comparisons of the genetic profiles of West Eurasians before and after admixture show that population movements within the last 1,500 years are likely to have maintained differentiation among groups. Our analysis provides a timeline of the gene flow events that have generated the contemporary genetic landscape of West Eurasia. PMID:26387712

  9. Admixture estimates for Caracas, Venezuela, based on autosomal, Y-chromosome, and mtDNA markers.

    Science.gov (United States)

    Martínez, Helios; Rodríguez-Larralde, Alvaro; Izaguirre, Mary Helen; De Guerra, Dinorah Castro

    2007-04-01

    The present Venezuelan population is the product of admixture of Amerindians, Europeans, and Africans, a process that was not homogeneous throughout the country. Blood groups, short tandem repeats (STRs), mtDNA, and Y-chromosome markers have been used successfully in admixture studies, but few such studies have been conducted in Venezuela. In this study we aim to estimate the admixture components of samples from two different socioeconomic levels from Caracas, Venezuela's capital city, compare their differences, and infer sexual asymmetry in the European Amerindian union patterns. Gene frequencies for blood groups ABO and Rh (CDE) and for the STRs VWA, F13A01, and FES/FPS and mtDNA and Y-chromosome haplogroups were studied in a sample of 60 individuals living in Caracas, taken from a private clinic (high socioeconomic level), and 50 individuals, also living in Caracas, drawn from a public maternity clinic (low socioeconomic level). The admixture analysis for the five autosomal markers gives a high European component (0.78) and an almost negligible African sub-Saharan component (0.06) for the high socioeconomic level, whereas for the low socioeconomic level the sub-Saharan, European, and Amerindian components were 0.21, 0.42, and 0.36, respectively. Estimates of admixture based on mtDNA and Y-chromosome markers reveal that the Amerindian contribution to these Caracas samples is almost entirely through females, because the Y-chromosome Amerindian and African sub-Saharan chromosomes found in this study were scarce. Our study reveals that the identification of the grandparents' geographic origin is an important methodological aspect to take into account in genetic studies related to the reconstruction of historical events.

  10. Scanning tunneling microscopy II further applications and related scanning techniques

    CERN Document Server

    Güntherodt, Hans-Joachim

    1992-01-01

    Scanning Tunneling Microscopy II, like its predecessor, presents detailed and comprehensive accounts of the basic principles and broad range of applications of STM and related scanning probe techniques. The applications discussed in this volume come predominantly from the fields of electrochemistry and biology. In contrast to those described in Vol. I, these sudies may be performed in air and in liquids. The extensions of the basic technique to map other interactions are described inchapters on scanning force microscopy, magnetic force microscopy, scanning near-field optical microscopy, together with a survey of other related techniques. Also described here is the use of a scanning proximal probe for surface modification. Togehter, the two volumes give a comprehensive account of experimental aspcets of STM. They provide essentialreading and reference material for all students and researchers involvedin this field.

  11. Scanning tunneling microscopy II further applications and related scanning techniques

    CERN Document Server

    Güntherodt, Hans-Joachim

    1995-01-01

    Scanning Tunneling Microscopy II, like its predecessor, presents detailed and comprehensive accounts of the basic principles and broad range of applications of STM and related scanning probe techniques. The applications discussed in this volume come predominantly from the fields of electrochemistry and biology. In contrast to those described in STM I, these studies may be performed in air and in liquids. The extensions of the basic technique to map other interactions are described in chapters on scanning force microscopy, magnetic force microscopy, and scanning near-field optical microscopy, together with a survey of other related techniques. Also described here is the use of a scanning proximal probe for surface modification. Together, the two volumes give a comprehensive account of experimental aspects of STM. They provide essential reading and reference material for all students and researchers involved in this field. In this second edition the text has been updated and new methods are discussed.

  12. Effect of high doses of chemical admixtures on the strength development and freeze-thaw durability of portland cement mortar

    Science.gov (United States)

    Korhonen, Charles J.

    This thesis examines the low-temperature strength development of portland cement concrete made with high doses of chemical admixtures dissolved in the mixing water and the possible beneficial effect of these admixtures on that concrete's long-term freeze-thaw durability. The literature shows that high doses of chemical admixtures can protect fresh concrete against freezing and that, under certain conditions, these admixtures can enhance the freeze-thaw durability of concrete. The challenge is that there are no acceptance standards in the U.S. that allow chemicals to be used to protect concrete against freezing. Also, the perception is that chemicals might somehow harm the concrete. This perception seems to be based on the fact that deicing salts, when applied to concrete pavement, cause roadways to scale away. This study investigated the effect of high doses of commercially available admixtures on fresh concrete while it gained strength at low temperature and on hardened concrete exposed to repeated cycles of freezing and thawing in a moist environment. The reason for studying off-the-shelf admixtures was that these materials are approved for use in concrete; they were already governed by their own set of standards. Four mortars were examined, each with a different cement and water content, when dosed with five commercial admixtures. This allowed the fresh mortar to gain appreciable strength when it was kept at nearly -10C. The admixtures also enhanced the freeze-thaw durability of the mortar, even when it was not air-entrained. Clearly, as the dosage of admixture increased beyond approximately 22% by weight of water, the mortar appeared to be unaffected by up to 700 cycles of freezing and thawing.

  13. Thyroid Scan and Uptake

    Science.gov (United States)

    ... Physician Resources Professions Site Index A-Z Thyroid Scan and Uptake Thyroid scan and uptake uses small ... Thyroid Scan and Uptake? What is a Thyroid Scan and Uptake? A thyroid scan is a type ...

  14. 基于扫描匹配预处理的即时定位与地图创建%Scan matching preprocess for simultaneous localization and mapping

    Institute of Scientific and Technical Information of China (English)

    温安邦; 吴怀宇; 赵季

    2009-01-01

    Simultaneous Localization And Mapping(SLAM) problem and its solution for indoor autonomous mobile robot are ana-lyzed.To improve the accuracy and robustness,a method using preprocess based on scan match for SLAM is proposed.This method can feed SLAM with a priori pose information,and is proved to be valid and practical by analyzing the result of experiment.%研究了室内自主移动机器人的即时定位与地图创建问题.分析了目前解决SLAM问题的方法,提出了基于扫描匹配预处理的即时定位与地图创建,用扫描匹配为SLAM提供机器人先验位姿信息.对实验结果和数据的分析,得出了所提出方法可进一步提高SLAM的精度和鲁棒性.

  15. Anti-chloride permeability and anti-chloride corrodibility of a green high performance concrete admixture in concrete

    Institute of Scientific and Technical Information of China (English)

    ZHENG Yongbao; LIU Xinrong; LIU Dongyan; CHEN Jiangong; HUANG Xiongjun

    2003-01-01

    The effects of green high performance concrete (GHPC) admixture on the anti-chloride permeability and anti- chloride corrodibility of concrete are studied by a series of experiments designed on the basis of the diffusion principle and electrochemical principle. The GHPC admixture consists of fly ash, gangue, slag, red mud, etc., of which the mass fraction of industrial residues is over 96 %. The anti-permeabilities and anti-corrodibilities of the tested GHPC and normal concrete (NC) are evaluated by the Diffusion Coefficients of chloride which was obtained by measuring the concentration of chloride in the tested systems by the voltage difference method. It is found that the adoption of GHPC admixture greatly improves the anti-chloride permeability and anti-chloride corrodibility by modifying the inner structure and contracting the porosity of concrete to the reduce considerably the diffusion rate of chloride. The admixture is desirable regarding its engineering performances as well as economical and environmental interests.

  16. Childhood trauma is associated with a specific admixture of affective, anxiety, and psychosis symptoms cutting across traditional diagnostic boundaries

    NARCIS (Netherlands)

    van Nierop, M; Viechtbauer, W; Gunther, N; van Zelst, C; de Graaf, R; Ten Have, M; van Dorsselaer, S; Bak, M; van Winkel, R; Cahn, W

    2015-01-01

    BACKGROUND: Meta-analyses link childhood trauma to depression, mania, anxiety disorders, and psychosis. It is unclear, however, whether these outcomes truly represent distinct disorders following childhood trauma, or that childhood trauma is associated with admixtures of affective, psychotic, anxiet

  17. Influence of Mineral Admixtures on the Electro-deposition Healing Effect of Concrete Cracks

    Institute of Scientific and Technical Information of China (English)

    CHU Hongqiang; JIANG Linhua; YOU Lushen; XU Ning; SONG Zijian; ZHANG Yan

    2014-01-01

    Two types of solutions (ZnSO4, MgSO4) were selected to study the influence of mineral admixtures on the electro-deposition healing effect of concrete cracks. Four parameters (i e, rates of weight gain, surface coating, crack closure and crack filling depth) were measured. The mineral composition of electro-deposits in the cracks was analyzed. The study shows that the healing effect of mortar specimens with 10%fly ash is the worst, while the healing effect of mortar specimens with 20%fly ash is better than that of the specimens without fly ash. The rates of weight gain, surface coating, crack closure and crack filling depth decrease with increasing content of the ground granulated blast-furnace slag(GGBS). The mineral admixtures have no influence on the composition of deposits.

  18. Utilization of black liquor as concrete admixture and set retarder aid

    Directory of Open Access Journals (Sweden)

    Samar A. El-Mekkawi

    2011-04-01

    Full Text Available The utilization of black liquor, produced by the pulp and paper industry in Egypt, as a workability aid and set retarder admixture has been investigated. This approach may help eliminate the environmentally polluting black liquor waste. It also provides a low cost by-product, which can be widely used in the construction industry. The properties of black liquor and its performance on concrete at two different ratios of water to cement have been studied. The results revealed that black liquor from rice straw pulp increases concrete workability, improves compaction, and reduces honeycombing. Moreover, it retards the initial and final set time and enhances uniform compaction. The effect of incorporating small portions of silica fume has been investigated. The ageing effect of this material over a period of one year, to determine its safe storage period, has been studied. Finally, this admixture was found to comply with the relevant Egyptian standards.

  19. Standard test method for initial screening of corrosion inhibiting admixtures for steel in concrete

    CERN Document Server

    American Society for Testing and Materials. Philadelphia

    2007-01-01

    1.1 This test method covers a procedure for determining the effects of chemical admixtures on the corrosion of metals in concrete. This test method can be used to evaluate materials intended to inhibit chloride-induced corrosion of steel in concrete. It can also be used to evaluate the corrosivity of admixtures by themselves or in a chloride environment. This test is not applicable for emulsions. 1.2 &solely-SI-units; 1.3 This standard does not purport to address all of the safety concerns, if any, associated with its use. It is the responsibility of the user of this standard to establish appropriate safety and health practices and determine the applicability of regulatory limitations prior to use.

  20. Lipid destabilisation in a ternary admixture for paediatric parenteral nutrition due to heparin and trigger factors.

    Science.gov (United States)

    Hernández Prats, C; Panisello, M Real; Fuentes Bonmatí, M J; Torres Chazarra, C; Sánchez Casado, M I

    2012-01-01

    The preparation of paediatric parenteral nutrition admixtures varies greatly. There is still a clear lack of consensus on many points. These points include the use of organic or inorganic phosphate or calcium salts, preparing binary or ternary mixtures, the type of lipid used, and the addition or suppression of heparin or carnitine, etc. The process must be standardised in order to guarantee that prepared mixtures will be stable. However, there is still no information on how to predict their stability with any degree of precision, particularly for ternary mixtures. For that reason, any change applied may trigger a destabilisation process that places patient safety at risk. We describe a case of a ternary paediatric parenteral nutrition admixture in which creaming was observed. We indicate the factors that gave rise to this phenomenon and the measures taken to avoid it.

  1. Lime-based repair mortars with water-repellent admixtures: laboratory durability assessment

    OpenAIRE

    Nunes, C.; Slížková, Z. (Zuzana)

    2015-01-01

    Conservation of architectural structures using lime binders is currently an important research topic aiming compatibility, durability and sustainability. In this study, lime (L) and lime-metakaolin (LM) mortars were prepared with the addition of water-repellent admixtures: linseed oil, stand oil and a silane based water-repellent. Experimental results demonstrate that oil imparts higher hydrophobicity to both L and LM mixtures. Durability was assessed through freeze-thaw and NaCl crystal...

  2. Quality assessment of total parenteral nutrition admixtures by the use of fractional factorial design

    Directory of Open Access Journals (Sweden)

    Mirković Dušica

    2013-01-01

    Full Text Available Background/Aim. Parenteral nutrition as a specific aspect of providing nutritients still remains a permanent topic of both theoretical and experimental research. Total parenteral nutrition (TPN admixtures have complex contents making difficult to maintain their stability. The most critical parameter is the diameter of a lipid droplet, i.e. droplet size distribution. It is recommended that droplet size should not be more than 5

  3. PREDICTION OF GLOBAL AND LOCAL SIMMENTAL AND RED HOLSTEIN FRIESIAN ADMIXTURE LEVELS IN SWISS FLECKVIEH CATTLE

    Directory of Open Access Journals (Sweden)

    Negar Khayatzadeh

    2015-09-01

    Full Text Available In this study we estimated levels of local ancestry for individuals of the Swiss Fleckvieh dairy cattle population. It is a composite breed descending from two pure breeds, Simmental (SIM and Red Holstein Friesian (RHF. Illumina BovineSNP50 Beadchip genotyping data for a total of 500 pure and admixed animals were used for the analysis. The global ancestries estimated by Hidden Markov model were 0.68 and 0.32 for RHF and SIM respectively. Local ancestry levels investigated along chromosomes 2, 3 and 13 indicated that there were some regions across the chromosomes exhibiting substantial fluctuations in admixture. On chromosome 2, in the range of 28 to 31, 41 to 46 and 54 to 56 Mb RHF ancestry is substantially higher than average (0.77-0.78. These regions on chromosome 2 are wide, indicating recent admixture. Along the segments on chromosome 2, many QTLs related to dairy, conformation, reproduction, health and carcass traits were found. We observed sharper excess in favour of SIM on chromosome 3, whereas different regions with excess of RHF and SIM were found out on Chromosome 13. At the first part of chromosome 13, an excess of RHF was observed. Moreover, in regions between 40 and 57 Mb excess of SIM, referred to recent admixture was detected. In respect of RHF chromosome segments in admixed animals, dairy, reproduction and health QTLs were found. In positions where more Simmental segments were detected, QTLs related to meat and carcass traits as well as udder health traits were found. In conclusion, the authors believe that estimation of local admixture levels in crossbred populations can add information to the composite breeds history of selection.

  4. Tracing the origin of the east-west population admixture in the Altai region (Central Asia.

    Directory of Open Access Journals (Sweden)

    Mercedes González-Ruiz

    Full Text Available A recent discovery of Iron Age burials (Pazyryk culture in the Altai Mountains of Mongolia may shed light on the mode and tempo of the generation of the current genetic east-west population admixture in Central Asia. Studies on ancient mitochondrial DNA of this region suggest that the Altai Mountains played the role of a geographical barrier between West and East Eurasian lineages until the beginning of the Iron Age. After the 7th century BC, coinciding with Scythian expansion across the Eurasian steppes, a gradual influx of East Eurasian sequences in Western steppes is detected. However, the underlying events behind the genetic admixture in Altai during the Iron Age are still unresolved: 1 whether it was a result of migratory events (eastward firstly, westward secondly, or 2 whether it was a result of a local demographic expansion in a 'contact zone' between European and East Asian people. In the present work, we analyzed the mitochondrial DNA lineages in human remains from Bronze and Iron Age burials of Mongolian Altai. Here we present support to the hypothesis that the gene pool of Iron Age inhabitants of Mongolian Altai was similar to that of western Iron Age Altaians (Russia and Kazakhstan. Thus, this people not only shared the same culture (Pazyryk, but also shared the same genetic east-west population admixture. In turn, Pazyryks appear to have a similar gene pool that current Altaians. Our results further show that Iron Age Altaians displayed mitochondrial lineages already present around Altai region before the Iron Age. This would provide support for a demographic expansion of local people of Altai instead of westward or eastward migratory events, as the demographic event behind the high population genetic admixture and diversity in Central Asia.

  5. Repair, Evaluation, Maintenance, and Rehabilitation Research Program. Latex Admixtures for Portland Cement Concrete and Mortar.

    Science.gov (United States)

    1986-07-01

    Examples of polymers used as latex admixtures for concrete and mor- tar in the United States are PVA, styrene-butadiene, polyacrylates (acrylics), and...the substrate by removing all loose and disintegrating material. Oil, grease, or other chemicals should be re- moved with a detergent , and the... detergent should be removed by several wash- ings with water. Because of the surface film characteristics of a latex mixture, the mortar should be placed as

  6. Portland cement hydration in the presence of admixtures: black gram pulse and superplasticizer

    OpenAIRE

    Viveka Nand Dwivedi; Shiva Saran Das; Nakshatra Bahadur Singh; Sarita Rai; Namdev Shriram Gajbhiye

    2008-01-01

    Effect of admixtures such as black gram pulse (BGP) and sulfonated naphthalene based superplasticizer (SP) on the hydration of Portland cement has been studied. The hydration characteristics of OPC in the presence of BGP and SP were studied with the help of non evaporable water content determinations, calorimetric method, Mössbauer spectroscopic and atomic force microscopic techniques. Results have shown that both BGP and SP get adsorbed at the surface of cement and its hydration products. Th...

  7. Analysis of admixture and genetic structure of two Native American groups of Southern Argentinean Patagonia.

    Science.gov (United States)

    Sala, Andrea; Corach, Daniel

    2014-03-01

    Argentinean Patagonia is inhabited by people that live principally in urban areas and by small isolated groups of individuals that belong to indigenous aboriginal groups; this territory exhibits the lowest population density of the country. Mapuche and Tehuelche (Mapudungun linguistic branch), are the only extant Native American groups that inhabit the Argentinean Patagonian provinces of Río Negro and Chubut. Fifteen autosomal STRs, 17 Y-STRs, mtDNA full length control region sequence and two sets of Y and mtDNA-coding region SNPs were analyzed in a set of 434 unrelated individuals. The sample set included two aboriginal groups, a group of individuals whose family name included Native American linguistic root and urban samples from Chubut, Río Negro and Buenos Aires provinces of Argentina. Specific Y Amerindian haplogroup Q1 was found in 87.5% in Mapuche and 58.82% in Tehuelche, while the Amerindian mtDNA haplogroups were present in all the aboriginal sample contributors investigated. Admixture analysis performed by means of autosomal and Y-STRs showed the highest degree of admixture in individuals carrying Mapuche surnames, followed by urban populations, and finally by isolated Native American populations as less degree of admixture. The study provided novel genetic information about the Mapuche and Tehuelche people and allowed us to establish a genetic correlation among individuals with Mapudungun surnames that demonstrates not only a linguistic but also a genetic relationship to the isolated aboriginal communities, representing a suitable proxy indicator for assessing genealogical background.

  8. Study on Strength and Microstructure of Cement-Based Materials Containing Combination Mineral Admixtures

    Directory of Open Access Journals (Sweden)

    Meijuan Rao

    2016-01-01

    Full Text Available The compressive strength of complex binders containing two or three blended mineral admixtures in terms of glass powder (GP, limestone powder (LP, and steel slag powder (SP was determined by a battery solution type compressive testing machine. The morphology and microstructure characteristics of complex binder hydration products were also studied by microscopic analysis methods, such as XRD, TG-DTA, and SEM. The mechanical properties of the cement-based materials were analyzed to reveal the most appropriate mineral admixture type and content. The early sample strength development with GP was very slow, but it rapidly grew at later stages. The micro aggregate effect and pozzolanic reaction mutually occurred in the mineral admixture. In the early stage, the micro aggregate effect reduced paste porosity and the small particles connected with the cement hydration products to enhance its strength. In the later stage, the pozzolanic reaction of some components in the complex powder occurred and consumed part of the calcium hydroxide to form C-S-H gel, thus improving the hydration environment. Also, the produced C-S-H gel made the structure more compact, which improved the structure’s strength.

  9. Uncontrolled admixture and loss of genetic diversity in a local Vietnamese pig breed.

    Science.gov (United States)

    Berthouly-Salazar, Cécile; Thévenon, Sophie; Van, Thu Nhu; Nguyen, Binh Trong; Pham, Lan Doan; Chi, Cuong Vu; Maillard, Jean-Charles

    2012-05-01

    The expansion of intensive livestock production systems in developing countries has increased the introduction of highly productive exotic breeds facilitating indiscriminate crossbreeding with local breeds. In this study, we set out to investigate the genetic status of the Vietnamese Black H'mong pig breed by evaluating (1) genetic diversity and (2) introgression from exotic breeds. Two exotic breeds, namely Landrace and Yorkshire used for crossbreeding, and the H'mong pig population from Ha Giang (HG) province were investigated using microsatellite markers. Within the province, three phenotypes were observed: a White, a Spotted and a Black phenotype. Genetic differentiation between phenotypes was low (0.5-6.1%). The White phenotypes showed intermediate admixture values between exotic breeds and the Black HG population (0.53), indicating a crossbreed status. Management practices were used to predict the rate of private diversity loss due to exotic gene introgressions. After 60 generations, 100% of Black private alleles will be lost. This loss is accelerated if the admixture rate is increased but can be slowed down if the mortality rate (e.g., recruitment rate) is decreased. Our study showed that a large number of markers are needed for accurately identifying hybrid classes for closely related populations. While our estimate of admixture still seems underestimated, genetic erosion can occur very fast even through indiscriminate crossbreeding.

  10. Helix Scan: A Scan Design for Diagnosis

    Institute of Scientific and Technical Information of China (English)

    WANG Fei; HU Yu; LI Xiaowei

    2007-01-01

    Scan design is a widely used design-for-testability technique to improve test quality and efficiency. For the scan-designed circuit, test and diagnosis of the scan chain and the circuit is an important process for silicon debug and yield learning. However, conventional scan designs and diagnosis methods abort the subsequent diagnosis process after diagnosing the scan chain if the scan chain is faulty. In this work, we propose a design-for-diagnosis scan strategy called helix scan and a diagnosis algorithm to address this issue. Unlike previous proposed methods, helix scan has the capability to carry on the diagnosis process without losing information when the scan chain is faulty. What is more, it simplifies scan chain diagnosis and achieves high diagnostic resolution as well as accuracy. Experimental results demonstrate the effectiveness of our design.

  11. Chemical, Mechanical, and Durability Properties of Concrete with Local Mineral Admixtures under Sulfate Environment in Northwest China

    Directory of Open Access Journals (Sweden)

    Qingke Nie

    2014-05-01

    Full Text Available Over the vast Northwest China, arid desert contains high concentrations of sulfate, chloride, and other chemicals in the ground water, which poses serious challenges to infrastructure construction that routinely utilizes portland cement concrete. Rapid industrialization in the region has been generating huge amounts of mineral admixtures, such as fly ash and slags from energy and metallurgical industries. These industrial by-products would turn into waste materials if not utilized in time. The present study evaluated the suitability of utilizing local mineral admixtures in significant quantities for producing quality concrete mixtures that can withstand the harsh chemical environment without compromising the essential mechanical properties. Comprehensive chemical, mechanical, and durability tests were conducted in the laboratory to characterize the properties of the local cementitious mineral admixtures, cement mortar and portland cement concrete mixtures containing these admixtures. The results from this study indicated that the sulfate resistance of concrete was effectively improved by adding local class F fly ash and slag, or by applying sulfate resistance cement to the mixtures. It is noteworthy that concrete containing local mineral admixtures exhibited much lower permeability (in terms of chloride ion penetration than ordinary portland cement concrete while retaining the same mechanical properties; whereas concrete mixtures made with sulfate resistance cement had significantly reduced strength and much increased chloride penetration comparing to the other mixtures. Hence, the use of local mineral admixtures in Northwest China in concrete mixtures would be beneficial to the performance of concrete, as well as to the protection of environment.

  12. Public Waters Inventory Maps

    Data.gov (United States)

    Minnesota Department of Natural Resources — This theme is a scanned and rectified version of the Minnesota DNR - Division of Waters "Public Waters Inventory" (PWI) maps. DNR Waters utilizes a small scale...

  13. Ancestral proportions and admixture dynamics in geographically defined African Americans living in South Carolina.

    Science.gov (United States)

    Parra, E J; Kittles, R A; Argyropoulos, G; Pfaff, C L; Hiester, K; Bonilla, C; Sylvester, N; Parrish-Gause, D; Garvey, W T; Jin, L; McKeigue, P M; Kamboh, M I; Ferrell, R E; Pollitzer, W S; Shriver, M D

    2001-01-01

    We analyzed admixture in samples of six different African-American populations from South Carolina: Gullah-speaking Sea Islanders in coastal South Carolina, residents of four counties in the "Low Country" (Berkeley, Charleston, Colleton, and Dorchester), and persons living in the city of Columbia, located in central South Carolina. We used a battery of highly informative autosomal, mtDNA, and Y-chromosome markers. Two of the autosomal markers (FY and AT3) are linked and lie 22 cM apart on chromosome 1. The results of this study indicate, in accordance with previous historical, cultural, and anthropological evidence, a very low level of European admixture in the Gullah Sea Islanders (m = 3.5 +/- 0.9%). The proportion of European admixture is higher in the Low Country (m ranging between 9. 9 +/- 1.8% and 14.0 +/- 1.9%), and is highest in Columbia (m = 17.7 +/- 3.1%). A sex-biased European gene flow and a small Native American contribution to the African-American gene pool are also evident in these data. We studied the pattern of pairwise allelic associations between the FY locus and the nine other autosomal markers in our samples. In the combined sample from the Low Country (N = 548), a high level of linkage disequilibrium was observed between the linked markers, FY and AT3. Additionally, significant associations were also detected between FY and 4 of the 8 unlinked markers, suggesting the existence of significant genetic structure in this population. A continuous gene flow model of admixture could explain the observed pattern of genetic structure. A test conditioning on the overall admixture of each individual showed association of ancestry between the two linked markers (FY and AT3), but not between any of the unlinked markers, as theory predicts. Thus, even in the presence of genetic structure due to continuous gene flow or some other factor, it is possible to differentiate associations due to linkage from spurious associations due to genetic structure.

  14. Lumbar spine CT scan

    Science.gov (United States)

    CAT scan - lumbar spine; Computed axial tomography scan - lumbar spine; Computed tomography scan - lumbar spine; CT - lower back ... your breath for short periods of time. The scan should take only 10 to 15 minutes.

  15. Ultrafast scanning tunneling microscopy

    Energy Technology Data Exchange (ETDEWEB)

    Botkin, D.A. [California Univ., Berkeley, CA (United States). Dept. of Physics]|[Lawrence Berkeley Lab., CA (United States)

    1995-09-01

    I have developed an ultrafast scanning tunneling microscope (USTM) based on uniting stroboscopic methods of ultrafast optics and scanned probe microscopy to obtain nanometer spatial resolution and sub-picosecond temporal resolution. USTM increases the achievable time resolution of a STM by more than 6 orders of magnitude; this should enable exploration of mesoscopic and nanometer size systems on time scales corresponding to the period or decay of fundamental excitations. USTM consists of a photoconductive switch with subpicosecond response time in series with the tip of a STM. An optical pulse from a modelocked laser activates the switch to create a gate for the tunneling current, while a second laser pulse on the sample initiates a dynamic process which affects the tunneling current. By sending a large sequence of identical pulse pairs and measuring the average tunnel current as a function of the relative time delay between the pulses in each pair, one can map the time evolution of the surface process. USTM was used to measure the broadband response of the STM`s atomic size tunnel barrier in frequencies from tens to hundreds of GHz. The USTM signal amplitude decays linearly with the tunnel junction conductance, so the spatial resolution of the time-resolved signal is comparable to that of a conventional STM. Geometrical capacitance of the junction does not appear to play an important role in the measurement, but a capacitive effect intimately related to tunneling contributes to the measured signals and may limit the ultimate resolution of the USTM.

  16. Effectiveness of shrinkage-reducing admixtures on Portland pozzolan cement concrete

    Directory of Open Access Journals (Sweden)

    Videla, C.

    2005-06-01

    Full Text Available Drying shrinkage causes tensile stress in restrained concrete members. Since all structural elements are subject to some degree of restraint, drying shrinkage is regarded to be one of the main causes of concrete cracking. The purpose of the present study was to evaluate the effectiveness of SRA in reducing drying shrinkage strain in Portland pozzolan cement concrete. The major variables examined included slump, admixture type and dose, and specimen size. The measured results indicate that any of the admixtures used in the study significantly reduced shrinkage. Concrete manufactured with shrinkage reducing admixtures shrank an average of 43% less than concrete without admixtures. As a rule, the higher the dose of admixture, the higher was its shrinkage reduction performance. The experimental results were compared to the shrinkage strain estimated with the ACI 209, CEB MC 90, B3, GL 2000, Sakata 1993 and Sakata 2001 models. Although none of these models was observed to accurately describe the behaviour of Portland pozzolan cement concrete with shrinkage reducing admixtures, the Sakata 2001 model, with a weighted coefficient of variation of under 30%, may be regarded to be roughly adequate.

    La retracción por secado es un fenómeno intrínseco del hormigón que produce tensiones de tracción en elementos restringidos de hormigón. Puesto que todos los elementos presentan algún grado de retracción, se considera a la retracción por secado como una de las principales causas de agrietamiento en proyectos de construcción en hormigón. Por lo tanto, el objetivo de esta investigación fue evaluar la efectividad de los aditivos reductores de retracción (SRA en hormigones fabricados con cemento Portland puzolánico. Las variables principales estudiadas incluyen el asentamiento de cono de Abrams, marca y dosis de aditivo reductor de retracción, y tamaño de espécimen de hormigón. Los resultados obtenidos permiten concluir que el uso de

  17. Inferring genome-wide patterns of admixture in Qataris using fifty-five ancestral populations

    Directory of Open Access Journals (Sweden)

    Omberg Larsson

    2012-06-01

    Full Text Available Abstract Background Populations of the Arabian Peninsula have a complex genetic structure that reflects waves of migrations including the earliest human migrations from Africa and eastern Asia, migrations along ancient civilization trading routes and colonization history of recent centuries. Results Here, we present a study of genome-wide admixture in this region, using 156 genotyped individuals from Qatar, a country located at the crossroads of these migration patterns. Since haplotypes of these individuals could have originated from many different populations across the world, we have developed a machine learning method "SupportMix" to infer loci-specific genomic ancestry when simultaneously analyzing many possible ancestral populations. Simulations show that SupportMix is not only more accurate than other popular admixture discovery tools but is the first admixture inference method that can efficiently scale for simultaneous analysis of 50-100 putative ancestral populations while being independent of prior demographic information. Conclusions By simultaneously using the 55 world populations from the Human Genome Diversity Panel, SupportMix was able to extract the fine-scale ancestry of the Qatar population, providing many new observations concerning the ancestry of the region. For example, as well as recapitulating the three major sub-populations in Qatar, composed of mainly Arabic, Persian, and African ancestry, SupportMix additionally identifies the specific ancestry of the Persian group to populations sampled in Greater Persia rather than from China and the ancestry of the African group to sub-Saharan origin and not Southern African Bantu origin as previously thought.

  18. Independent introductions and admixtures have contributed to adaptation of European maize and its American counterparts

    Science.gov (United States)

    Brandenburg, Jean-Tristan; Mary-Huard, Tristan; Rigaill, Guillem; Corti, Hélène; Vitte, Clémentine; Charcosset, Alain; Tenaillon, Maud I.

    2017-01-01

    Through the local selection of landraces, humans have guided the adaptation of crops to a vast range of climatic and ecological conditions. This is particularly true of maize, which was domesticated in a restricted area of Mexico but now displays one of the broadest cultivated ranges worldwide. Here, we sequenced 67 genomes with an average sequencing depth of 18x to document routes of introduction, admixture and selective history of European maize and its American counterparts. To avoid the confounding effects of recent breeding, we targeted germplasm (lines) directly derived from landraces. Among our lines, we discovered 22,294,769 SNPs and between 0.9% to 4.1% residual heterozygosity. Using a segmentation method, we identified 6,978 segments of unexpectedly high rate of heterozygosity. These segments point to genes potentially involved in inbreeding depression, and to a lesser extent to the presence of structural variants. Genetic structuring and inferences of historical splits revealed 5 genetic groups and two independent European introductions, with modest bottleneck signatures. Our results further revealed admixtures between distinct sources that have contributed to the establishment of 3 groups at intermediate latitudes in North America and Europe. We combined differentiation- and diversity-based statistics to identify both genes and gene networks displaying strong signals of selection. These include genes/gene networks involved in flowering time, drought and cold tolerance, plant defense and starch properties. Overall, our results provide novel insights into the evolutionary history of European maize and highlight a major role of admixture in environmental adaptation, paralleling recent findings in humans. PMID:28301472

  19. Polar and brown bear genomes reveal ancient admixture and demographic footprints of past climate change

    Science.gov (United States)

    Miller, Webb; Schuster, Stephan C.; Welch, Andreanna J.; Ratan, Aakrosh; Bedoya-Reina, Oscar C.; Zhao, Fangqing; Kim, Hie Lim; Burhans, Richard C.; Drautz, Daniela I.; Wittekindt, Nicola E.; Tomsho, Lynn P.; Ibarra-Laclette, Enrique; Herrera-Estrella, Luis; Peacock, Elizabeth; Farley, Sean; Sage, George K.; Rode, Karyn; Obbard, Martyn E.; Montiel, Rafael; Bachmann, Lutz; Ingólfsson, Ólafur; Aars, Jon; Mailund, Thomas; Wiig, Øystein; Talbot, Sandra L.; Lindqvist, Charlotte

    2012-01-01

    Polar bears (PBs) are superbly adapted to the extreme Arctic environment and have become emblematic of the threat to biodiversity from global climate change. Their divergence from the lower-latitude brown bear provides a textbook example of rapid evolution of distinct phenotypes. However, limited mitochondrial and nuclear DNA evidence conflicts in the timing of PB origin as well as placement of the species within versus sister to the brown bear lineage. We gathered extensive genomic sequence data from contemporary polar, brown, and American black bear samples, in addition to a 130,000- to 110,000-y old PB, to examine this problem from a genome-wide perspective. Nuclear DNA markers reflect a species tree consistent with expectation, showing polar and brown bears to be sister species. However, for the enigmatic brown bears native to Alaska's Alexander Archipelago, we estimate that not only their mitochondrial genome, but also 5–10% of their nuclear genome, is most closely related to PBs, indicating ancient admixture between the two species. Explicit admixture analyses are consistent with ancient splits among PBs, brown bears and black bears that were later followed by occasional admixture. We also provide paleodemographic estimates that suggest bear evolution has tracked key climate events, and that PB in particular experienced a prolonged and dramatic decline in its effective population size during the last ca. 500,000 years. We demonstrate that brown bears and PBs have had sufficiently independent evolutionary histories over the last 4–5 million years to leave imprints in the PB nuclear genome that likely are associated with ecological adaptation to the Arctic environment.

  20. Effect of poly car boxy late admixtures on portland cement paste setting and rheological behaviour

    Directory of Open Access Journals (Sweden)

    Puertas, F.

    2005-03-01

    Full Text Available The objective of the work was to determine the effects of polycarboxilated-type admixture on the setting times and the rheological properties of different types of cements including CEM I 42.5 R, CEM Il/B-V 42.5 N and CEM III/B 32.5 N, defined according to the UNE EN 197-1:2000 standard. The results show that there is a lineal relationship between the initial setting times and the admixture dosage. Mathematical equations that model this behaviour for each of the cements have been determined. The data obtained from the minislump test and from the rheological parameters determined using the rheometer (plastic viscosity and yield stress point to similar conclusions. It was also verified that the workability effect of the polycarboxilate admixture is most intense for blended cements.

    El objetivo de este trabajo ha sido estudiar el efecto de la dosificación de un aditivo basado en policarboxilatos sobre el inicio de tiempo de fraguado y las propiedades reo lógicas en pastas de diferentes tipos de cemento (CEM 142.5 R, CEM 11/ B-V42.5 NYCEMIII/B 32.5 N-Norma EN 197-1:2000. existe una relación lineal entre el inicio del fraguado y la dosificación del aditivo, se han determinado las ecuaciones matemáticas que describen este comportamiento para cada cemento, los resultados obtenidos sobre la fluidez de la pasta en el ensayo del "minislump" coinciden con la evolución de los valores de los parámetros reológicos (esfuerzo de cizalladura y viscosidad plástica determinados a través de un reómetro. el efecto fluidificante del aditivo superplastificante basado en policarboxilatos es mucho más marcado en cementos que contienen adiciones.

  1. Influence of Shrinkage-Reducing Admixtures on the Development of Plastic Shrinkage Cracks

    DEFF Research Database (Denmark)

    Lura, Pietro; Pease, Bradley Justin; Mazzotta, Guy;

    2007-01-01

    settlement of the concrete and tensile stress development in the surface of the concrete, which increase the potential for development of plastic shrinkage cracks. Specifically, this paper studies the development of plastic shrinkage cracks in mortars containing a commercially available shrinkage......-reducing admixture (SRA). Mortars containing SRA show fewer and narrower plastic shrinkage cracks than plain mortars when exposed to the same environmental conditions. It is proposed that the lower surface tension of the pore fluid in the mortars containing SRA results in less evaporation, reduced settlement......, reduced capillary tension, and lower crack-inducing stresses at the topmost layer of the mortar....

  2. Laboratory Evaluation of Expedient Low-Temperature Admixtures for Runway Craters in Cold Weather

    Science.gov (United States)

    2014-10-01

    first determined the effects of individual admixtures, quantifying their effects at minimum and maximum useful proportions. The team deter- mined ...H2COH)2 ethylene glycol LiOH lithium hydroxide LiNO3 lithium nitrate C6H9MnO6 × 2(H20) manganese acetate MgCl2 magnesium chloride Mg(NO3)2...the chemical composition. Using a Claisse fluxy with a lithium borate fluxing medium, we prepared samples as fused disks. Additionally, we prepared

  3. Rectification cleaning AsCl3 from the admixture of oxygen

    Directory of Open Access Journals (Sweden)

    Maznitska O. V.

    2008-06-01

    Full Text Available The process of the rectification cleaning of three-chlorous arsenic from the admixtures of products of his hydrolysis in the atmosphere of chlorous hydrogen has been considered in the article. Dependence of coefficient of relative volatility a three-chlorous arsenic from his concentration in muriatic solution is explored. The conduct of coefficient of relative volatility with concentrations of HCl and AsCl3 is compared. Saving of equalization of balance and equalization of working curve of column at such conduct of process of rectification is shown.

  4. Lung gallium scan

    Science.gov (United States)

    Gallium 67 lung scan; Lung scan; Gallium scan - lung; Scan - lung ... Gallium is injected into a vein. The scan will be taken 6 to 24 hours after the gallium is injected. (Test time depends on whether your condition is acute or chronic .) ...

  5. Heart PET scan

    Science.gov (United States)

    ... nuclear medicine scan; Heart positron emission tomography; Myocardial PET scan ... A PET scan requires a small amount of radioactive material (tracer). This tracer is given through a vein (IV), ...

  6. Modeling of heat evolution in silicate building materials with electrically conductive admixtures

    Science.gov (United States)

    Fiala, Lukáš; Maděra, Jiří; Vejmelková, Eva; Černý, Robert

    2016-12-01

    Silicate building materials are electrically non-conductive, in general. However, a sufficient amount of electrically conductive admixtures can significantly increase their electrical conductivity. Consequently, new practical applications of such materials are available. Materials with enhanced electrical properties can be used as self-sensing sensors monitoring evolution of cracks, electromagnetic shields or cores of deicing systems. This paper deals with the modeling of heat evolution in silicate building materials by the action of passing electric current. Due to the conducting paths formed in the material's matrix by adding a sufficient amount of electrically conductive admixture and applying electric voltage on the installed electrodes, electric current is passing through the material. Thanks to the electric current, Joule heat is successively evolved. As it is crucial to evaluate theoretically the amount of evolved heat in order to assess the effectiveness of such a system, a model describing the Joule heat evolution is proposed and a modeling example based on finite-element method is introduced.

  7. Synergistic effects of chemical admixtures in concretes containing supplementary cementing materials

    Energy Technology Data Exchange (ETDEWEB)

    Mailvaganam, N. P. [National Research Council of Canada, Instiute for Research in Construction, Ottawa, ON (Canada)

    2001-07-01

    As a result of the need to produce more durable structures, chemical additives to concrete such as superplasticizers and supplementary cementing materials such as silica fume and fly ash, attract considerable interest. The combined use of these materials produces a synergistic effect which results in a range of modifications such as improved mobility, cohesiveness, ultimate strength and durability, making it possible to place highly durable concrete under a variety of conditions. This paper examines the role of additives in augmenting desirable features in fly ash or silica fume/portland cement mixes, using specific examples to illustrate the manner in which these admixtures compensate for limitations and increase the effectiveness of both of these supplementary cementing materials. Rheological, structural and durability characteristics are the focus of interest. Results show that admixtures influence both the hydration and packing efficiency in the fly ash or silica fume concrete, producing significant improvements in the concrete that could not be readily attained if the materials were used individually. 30 refs., 3 tabs., 9 figs.

  8. Growth and characterization of pure and semiorganic nonlinear optical Lithium Sulphate admixtured l-alanine crystal

    Science.gov (United States)

    Vela, T.; Selvarajan, P.; Freeda, T. H.; Balasubramanian, K.

    2013-04-01

    Lithium sulphate admixtured l-alanine (LSLA) salt was synthesized and the solubility of the commercially available l-alanine and the synthesized LSLA sample was determined in de-ionized water at various temperatures. In accordance with the solubility data, the saturated aqueous solutions of l-alanine and lithium admixtured l-alanine were prepared separately and the single crystals of the samples were grown by the solution method with a slow evaporation technique. Studying single x-ray diffraction shows that pure and LSLA crystal belong to the orthorhombic system with a non-centrosymmetric space group P212121. Using the powder x-ray diffraction study, the crystallinity of the grown crystals is confirmed and the diffraction peaks are indexed. The various functional groups present in the pure and LSLA crystal are elucidated from Fourier transform infrared spectroscopy study. UV-visible transmittance is recorded to study the optical transmittance range for the grown crystals. The powder second harmonic generation test confirms the nonlinear optical property of the grown crystals. From the microhardness test, the hardness of the grown crystals is estimated. The dielectric behaviour, such as the dielectric constant and the loss of the sample, are measured as a function of temperature and frequency. The ac conductivity of the grown crystals is also studied and the activation energy is calculated.

  9. The effect of chemical admixtures and mineral additives on the properties of self-compacting mortars

    Energy Technology Data Exchange (ETDEWEB)

    Mustafa Sahmaran; Heru Ari Christianto; Ismail Ozgur Yaman [Middle East Technical University, Ankara (Turkey). Department of Civil Engineering

    2006-05-15

    Mortar serves as the basis for the workability properties of self-compacting concrete (SCC) and these properties could be assessed by self-compacting mortars (SCM). In fact, assessing the properties of SCM is an integral part of SCC design. The objective of this study was to evaluate the effectiveness of various mineral additives and chemical admixtures in producing SCMs. For this purpose, four mineral additives (fly ash, brick powder, limestone powder, and kaolinite), three superplasticizers (SP), and two viscosity modifying admixtures (VMA) were used. Within the scope of the experimental program, 43 mixtures of SCM were prepared keeping the amount of mixing water and total powder content (Portland cement and mineral additives) constant. Workability of the fresh mortar was determined using mini V-funnel and mini slump flow tests. The setting time of the mortars, were also determined. The hardened properties that were determined included ultrasonic pulse velocity and strength determined at 28 and 56 days. It was concluded that among the mineral additives used, fly ash and limestone powder significantly increased the workability of SCMs. On the other hand, especially fly ash significantly increased the setting time of the mortars, which can, however, be eliminated through the use of ternary mixtures, such as mixing fly ash with limestone powder. The two polycarboxyl based SPs yield approximately the same workability and the melamine formaldehyde based SP was not as effective as the other two.

  10. Improvement Of Sub-Grade Soil Properties Using Admixture Quarry Dust And Woven Geo-Textile

    Directory of Open Access Journals (Sweden)

    G. Priya Vasudha

    2015-08-01

    Full Text Available Abstract The important factor for design and construction of pavement is the behavior of underlying sub-grade. Large deformations in the sub-grade will lead to a continuous deterioration of the paved surface. As the sub-grade soil is too weak to bear the load engineering solutions such as geo reinforcement using geo-synthetics are additives which are earlier used in sub-grade improvement and such experimental study is carried by pervious authors. This paper deals with the sub-grade improvement using geo-textile as a reinforcement sheet and quarry dust as admixtures. In order to increase the strength of the sub-grade the quarry dust is varied with different percentages i.e. 0 5 10 15 20 and 25. In this study Proctors compaction tests and CBR soaked and unsoaked tests are conducted on locally available soil with reinforced material and with admixture. For this study it is identified that the engineering properties of the soil is improved in all conditions. The soil with quarry dust at optimum value is 20 has CBR soaked value is obtained 6.83 and unsoaked value is obtained 7.02 is increased when compared with conventionally soil. The soil quarry dust at optimum value is at 20 and Geo-textile has CBR soaked value is 6.59 and unsoaked value is 8.95 is increased when compared with conventionally soil and soil with quarry dust.

  11. Study of CVD diamond layers with amorphous carbon admixture by Raman scattering spectroscopy

    Directory of Open Access Journals (Sweden)

    Dychalska Anna

    2015-12-01

    Full Text Available Raman spectroscopy is a most often used standard technique for characterization of different carbon materials. In this work we present the Raman spectra of polycrystalline diamond layers of different quality, synthesized by Hot Filament Chemical Vapor Deposition method (HF CVD. We show how to use Raman spectroscopy for the analysis of the Raman bands to determine the structure of diamond films as well as the structure of amorphous carbon admixture. Raman spectroscopy has become an important technique for the analysis of CVD diamond films. The first-order diamond Raman peak at ca. 1332 cm−1 is an unambiguous evidence for the presence of diamond phase in the deposited layer. However, the existence of non-diamond carbon components in a CVD diamond layer produces several overlapping peaks in the same wavenumber region as the first order diamond peak. The intensities, wavenumber, full width at half maximum (FWHM of these bands are dependent on quality of diamond layer which is dependent on the deposition conditions. The aim of the present work is to relate the features of diamond Raman spectra to the features of Raman spectra of non-diamond phase admixture and occurrence of other carbon structures in the obtained diamond thin films.

  12. Early-age Electrical Resistivity and Reactive Capacity of Mineral Admixtures in Mortars

    Institute of Scientific and Technical Information of China (English)

    LIANG Wenquan; HE Zhen; ZHANG Yongchuan; CHEN Meizhu; YANG Huaquan

    2006-01-01

    A non-contacting electrical resistivity measurement device was used to investigate the effect of different types and contents of mineral admixtures on the hydration performance of mortars during early age. The experimental results show that the changes of measured resistivity with time of hydration can be used to describe the hydration characteristics of cement- based materials, as well as the physical and chemical behavior of fly ash; blast furnace slag and silica fume at the very early ages. With an increasing replacement ratio of mineral admixtures, for the specimens blended with fly ash or slag, the resistivity increases firstly, then the following flatting period extends and after setting the resistivity increasing becomes slow and consequently a lower resistivity value at 24 hours occurs. This is due to the dilution effect and lower pozzolanic/ hydraulic activity of fly ash and slag. However, for the samples incorporated with silica fume, the resistivity value through 24 hours is lower with shorter flatting period and larger slope in the resistivity curves, which is because of its particle size effect and higher pozzolanic activity of silica fume. Moreover, non-contacting resistivity measurement might provide a helpful information to predict the long term performance including the durability of cement-based materials at early ages.

  13. Preparation of High Impermeable and Crack-resistance Chemical Admixture and Its Mechanism

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    A kind of high impermeable and crack-resistance chemical admixture (HICRCA) was prepared, which is a compound chemical admixture composed of an expansion ingredient,density ingredient, and organic hydrophobic poreblocking ingredient. The results of the experiments indicate that the addition of HICRCA improves mortar and concrete in the following performances:(1) perfect workability: slump is more than 22cm, the slump after 3h is about 16cm; (2)high impermeability:for the mortar,the pervious height under a water pressure of 1.5MPa is 1.5cm,for the concrete, the pervious height under a water pressure of 5.0MPa is 2.2cm;(3)high crack-resistance:there is a micro-expansion at the age of 90d;(4)high compressivestrength:compared with the controlled concrete,the compressive strengths at the age of 3d and 28d are improved by 66.4% and 62.0%, respectively.At the same time,the effects of different curing condition on mortar and concrete expansive and shrinkage performance were studied.In addition,the impermeable and crack-resistance mechanism was investigated in the present paper.

  14. Scan BIST with biased scan test signals

    Institute of Scientific and Technical Information of China (English)

    XIANG Dong; CHEN MingJing; SUN JiaGuang

    2008-01-01

    The conventional test-per-scan built-in self-test (BIST) scheme needs a number of shift cycles followed by one capture cycle.Fault effects received by the scan flip-flops are shifted out while shifting in the next test vector like scan testing.Unlike deterministic testing,it is unnecessary to apply a complete test vector to the scan chains.A new scan-based BIST scheme is proposed by properly controlling the test signals of the scan chains,Different biased random values are assigned to the test signals of scan flip-flops in separate scan chains.Capture cycles can be inserted at any clock cycle if necessary.A new testability estimation procedure according to the proposed testing scheme is presented.A greedy procedure is proposed to select a weight for each scan chain.Experimental results show that the proposed method can improve test effectiveness of scan-based BIST greatly,and most circuits can obtain complete fault coverage or very close to complete fault coverage.

  15. Experimental Investigation of Droplet Evaporation of Water with Ground Admixtures while Motion in a Flame of Liquid Fuel

    Directory of Open Access Journals (Sweden)

    Dmitriyenko Margarita A.

    2016-01-01

    Full Text Available The evaporation features for the atomized flow of suspension on the base of water with ground admixtures in an area of high-temperature combustion products of liquid flammable substance (acetone were investigated experimentally by the optical methods of gas flow diagnostic and the high-speed video recording. The scales of influence of clay and silt concentration in droplets of atomized flow on the intensity of its evaporation were determined. The approximation dependences describing a decrease in typical size of suspension droplets at various values of ground admixtures were obtained.

  16. Effect of an admixture from Agave americana on the physical and mechanical properties of plaster

    Directory of Open Access Journals (Sweden)

    Ochoa, J. C.

    2013-03-01

    Full Text Available Physical and mechanical properties of a plaster paste added with an organic admixture, of the leaves of Agave americana, were studied. Plastic consistency behavior was evaluated and the water/gypsum(w/g ratio was determined for each dosage of the admixture. Admixtur eeffect on setting was evaluated too. The chemical transformation of the hemihydrated form to gypsum (dihydrated form was studied using a novel technique based on a moisture analyzer by halogen light. Flexural and compressive strengths were measured. The results show that ,for the same consistency, accordingly mechanical strengths were improved too. The setting times were increased which would enhance the application time of plaster and would reduce plastic shrinkage, common problems in this type of material. The changes in these physical properties not substantially affect the final mechanical strengths.

    Se estudiaron algunas propiedades físicas y mecánicas de pastas de yeso de construcción adicionadas con un aditivo de origen orgánico, producto de las hojas de la planta Agave americana. Se evaluó el comportamiento plástico de la pasta mediante ensayos de consistencia y se determinó, para cada dosificación, su relación agua/ yeso (a/y. Se evaluó la incidencia del aditivo en los tiempos de fraguado. La transformación química del hemihidrato a yeso dihidrato se estudió mediante una novedosa técnica basada en un analizador de humedad por luz halógena. Se midieron las resistencias mecánicas a flexo-tracción y a compresión. Los resultados del estudio muestran que, para una misma consistencia, se mejoran las resistencias mecánicas. Los tiempos de fraguado de la pasta se aumentaron lo que ayudaría mejorar los tiempos de aplicación del yeso y a disminuir las retracciones plásticas. Las modificaciones de estas propiedades físicas no afectan considerablemente las resistencias mecánicas finales.

  17. Conventional cerebrospinal fluid scanning

    Energy Technology Data Exchange (ETDEWEB)

    Schicha, H.

    1985-06-01

    Conventional cerebrospinal fluid scanning (CSF scanning) today is mainly carried out in addition to computerized tomography to obtain information about liquor flow kinetics. Especially in patients with communicating obstructive hydrocephalus, CSF scanning is clinically useful for the decision for shunt surgery. In patients with intracranial cysts, CSF scanning can provide information about liquor circulation. Further indications for CSF scanning include the assessment of shunt patency especially in children, as well as the detection and localization of cerebrospinal fluid leaks.

  18. Topographic Digital Raster Graphics, USGS quadrangle maps scanned, merged and projected to County Coordinate System, Published in 1990, 1:24000 (1in=2000ft) scale, Brown County, WI.

    Data.gov (United States)

    NSGIC GIS Inventory (aka Ramona) — This Topographic Digital Raster Graphics dataset, published at 1:24000 (1in=2000ft) scale, was produced all or in part from Hardcopy Maps information as of 1990. It...

  19. Achievement of Early Compressive Strength in Concrete Using Sporosarcina pasteurii Bacteria as an Admixture

    Directory of Open Access Journals (Sweden)

    Rakesh Chidara

    2014-01-01

    Full Text Available Often it is observed, attainment of early compressive strength in concrete is a challenge. Researchers have tried various admixtures to achieve the objective. This work addresses the issue of achieving early compressive strength in concrete using a bacterium called Sporosarcina pasteurii. The bacterium is characterised with the ability to precipitate calcium carbonate in the presence of any carbonate source and is known for its resistive capacity in extreme temperature and pressure zones. To establish the objective of gain in early strength around 192 concrete cubes were tested at 3, 7, 14, and 28 days and the results compared with controlled concrete. The bacterium was used in combination of chemicals and the dosage proportions were altered to achieve the desired M20 compressive strength at 28 days.

  20. Global prostate cancer incidence and the migration, settlement, and admixture history of the Northern Europeans.

    Science.gov (United States)

    Gunderson, Kristin; Wang, Christopher Y; Wang, Ruoxiang

    2011-08-01

    The most salient feature of prostate cancer is its striking ethnic disparity. High incidences of the disease are documented in two ethnic groups: descendents of the Northern Europeans and African Americans. Other groups, including native Africans, are much less susceptible to the disease. Given that many risk factors may contribute to carcinogenesis, an etiological cause for the ethnic disparity remains to be defined. By analyzing the global prostate cancer incidence data, we found that distribution of prostate cancer incidence coincides with the migration and settlement history of Northern Europeans. The incidences in other ethnic groups correlate to the settlement history and extent of admixture of the Europeans. This study suggests that prostate cancer has been spread by the transmission of a genetic susceptibility that resides in the Northern European genome.

  1. Plastic shrinkage of mortars with shrinkage reducing admixture and lightweight aggregates studied by neutron tomography

    Energy Technology Data Exchange (ETDEWEB)

    Wyrzykowski, Mateusz, E-mail: mateusz.wyrzykowski@empa.ch [Empa, Swiss Federal Laboratories for Materials Science and Technology, Concrete and Construction Chemistry Laboratory, Dübendorf (Switzerland); Lodz University of Technology, Department of Building Physics and Building Materials, Lodz (Poland); Trtik, Pavel [Paul Scherrer Institute, Laboratory for Neutron Scattering and Imaging, Villigen (Switzerland); Empa, Swiss Federal Laboratories for Materials Science and Technology, Concrete and Construction Chemistry Laboratory, Dübendorf (Switzerland); Münch, Beat [Empa, Swiss Federal Laboratories for Materials Science and Technology, Concrete and Construction Chemistry Laboratory, Dübendorf (Switzerland); Weiss, Jason [Purdue University, School of Civil Engineering, West Lafayette (United States); Vontobel, Peter [Paul Scherrer Institute, Laboratory for Neutron Scattering and Imaging, Villigen (Switzerland); Lura, Pietro [Empa, Swiss Federal Laboratories for Materials Science and Technology, Concrete and Construction Chemistry Laboratory, Dübendorf (Switzerland); ETH Zurich, Institute for Building Materials (IfB), Zurich (Switzerland)

    2015-07-15

    Water transport in fresh, highly permeable concrete and rapid water evaporation from the concrete surface during the first few hours after placement are the key parameters influencing plastic shrinkage cracking. In this work, neutron tomography was used to determine both the water loss from the concrete surface due to evaporation and the redistribution of fluid that occurs in fresh mortars exposed to external drying. In addition to the reference mortar with a water to cement ratio (w/c) of 0.30, a mortar with the addition of pre-wetted lightweight aggregates (LWA) and a mortar with a shrinkage reducing admixture (SRA) were tested. The addition of SRA reduced the evaporation rate from the mortar at the initial stages of drying and reduced the total water loss. The pre-wetted LWA released a large part of the absorbed water as a consequence of capillary pressure developing in the fresh mortar due to evaporation.

  2. Cultivar origin and admixture detection in Turkish olive oils by SNP-based CAPS assays.

    Science.gov (United States)

    Uncu, Ali Tevfik; Frary, Anne; Doganlar, Sami

    2015-03-04

    The aim of this study was to establish a DNA-based identification key to ascertain the cultivar origin of Turkish monovarietal olive oils. To reach this aim, we sequenced short fragments from five olive genes for SNP (single nucleotide polymorphism) identification and developed CAPS (cleaved amplified polymorphic DNA) assays for SNPs that alter restriction enzyme recognition motifs. When applied on the oils of 17 olive cultivars, a maximum of five CAPS assays were necessary to discriminate the varietal origin of the samples. We also tested the efficiency and limit of our approach for detecting olive oil admixtures. As a result of the analysis, we were able to detect admixing down to a limit of 20%. The SNP-based CAPS assays developed in this work can be used for testing and verification of the authenticity of Turkish monovarietal olive oils, for olive tree certification, and in germplasm characterization and preservation studies.

  3. Study on the kinetic mechanisms of copper vapor lasers with hydrogen-neon admixtures

    Science.gov (United States)

    Cheng, Cheng; Sun, Wei

    1997-02-01

    The kinetic mechanisms of copper vapor lasers with hydrogen-neon admixtures are studied in detail with a computational model. (i) The copper particle density increases as the wall temperature rises after adding hydrogen into neon buffer gas, and de-population of the laser lower levels is enhanced during the interpulse period owing to a larger thermal diffusion loss from the tube center to the wall. (ii) The power dissipated by the thyratron or current through it decreases with increasing frequency of the momentum-transfer collision of electrons, i.e. the input power into the laser tube increases. On the other hand, the plasma electron temperature and electron density decrease as the electron energy is depleted through the impact excitation of the vibration levels of hydrogen, which makes the population of the laser upper levels restrained.

  4. THE SLUMP RETENTION OF N-2000 HIGH-RANGE WATER-REDUCING AND RETARDING ADMIXTURE

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    N-2000 is an admixture for concrete, with a low slump loss, high range water-reducing ratio and long-time retarding. The N-2000 is made up of naphthalene-sulfonic-maldehyde polycondensation(NSMP) and ATMP. Its characteristic results from the synergistic effects of NSMP and ATMP. The results show that when 0.7%-1.2% of N-2000 is added to concrete (by mass of cement), the water reducing ratio is up to 20%-30%, and the slump of fresh concrete can be retained for 2 hours without significant loss. N-2000 can not only improve the workability of fresh concrete but also increase the strength of the hardened concrete, especially early strength. It is also proved to have a good compatibility with various cements.

  5. The Effect of a Plasticizing Admixture on the Properties of Hardened Concrete

    Directory of Open Access Journals (Sweden)

    Anastasija Abasova

    2012-11-01

    Full Text Available Concrete is material obtained mixing matrix material, coarse and small aggregates and water along with additives acquiring necessary properties of hardening. The quality and properties of raw material used for manufacturing concrete, V/C ratio and the uniformity of the compaction of the mixture lead to the fundamental properties of concrete. The compressive strength of concrete is one of the most important properties of concrete. The article deals with the impact of plasticizers on the structural properties of concrete choosing an optimal content of additives. Concrete plasticizers increasing the content of additive increase the strength of samples, the density and ultrasonic pulse of velocity and decrease absorption. Test results have revealed that a plasticizing admixture under dosing or overdosing can reduce the properties of concrete.

  6. Effect of Admixtures on the Yield Stresses of Cement Pastes under High Hydrostatic Pressures

    Directory of Open Access Journals (Sweden)

    Hong Jae Yim

    2016-03-01

    Full Text Available When cement-based materials are transported at a construction site, they undergo high pressures during the pumping process. The rheological properties of the materials under such high pressures are unknown, and estimating the workability of the materials after pumping is a complex problem. Among various influential factors on the rheology of concrete, this study investigated the effect of mineral and chemical admixtures on the high-pressure rheology. A rheometer was fabricated that could measure the rheological properties while maintaining a high pressure to simulate the pumping process. The effects of superplasticizer, silica fume, nanoclay, fly ash, or ground granulated blast furnace slag were investigated when mixed with two control cement pastes. The water-to-cement ratios were 0.35 and 0.50.

  7. Influence of Mineral Admixtures on the Permeability of Lightweight Aggregate Concrete

    Institute of Scientific and Technical Information of China (English)

    WANG Fazhou; HU Shuguang; DING Qingjun; PENG yanzhou

    2005-01-01

    The permeability of lightweight aggregate concrete was studied. Some efforts were taken to increase the resistance of lightweight aggregate concrete (LC) to water penetration by using the mineral admixtures of fly ash, granulated blast furnace slag or silica fume. Accelerated chloride penetrability test and liquid atmosphere press method were used to study the anti-permeability of lightweight aggregate concrete. The experimental results show that fly ash, granulated blast furnace slag and silica fume can decrease the permeability of lightweight aggregate concrete, but the effect of granulated blast furnace slag is poor. According to the SEM and pore structure analyzing results,an interface self-reinforcing effect model was presented and the reinforced mechanism of mineral mixture on LC was discussed according to the model described by authors.

  8. Maternal admixture and population structure in Mexican-Mestizos based on mtDNA haplogroups.

    Science.gov (United States)

    Martínez-Cortés, Gabriela; Salazar-Flores, Joel; Haro-Guerrero, Javier; Rubi-Castellanos, Rodrigo; Velarde-Félix, Jésus S; Muñoz-Valle, José F; López-Casamichana, Mavil; Carrillo-Tapia, Eduardo; Canseco-Avila, Luis M; Bravi, Claudio M; López-Armenta, Mauro; Rangel-Villalobos, Héctor

    2013-08-01

    The maternal ancestry (mtDNA) has important applications in different research fields, such as evolution, epidemiology, identification, and human population history. This is particularly interesting in Mestizos, which constitute the main population in Mexico (∼93%) resulting from post-Columbian admixture between Spaniards, Amerindians, and African slaves, principally. Consequently, we conducted minisequencing analysis (SNaPshot) of 11 mitochondrial single-nucleotide polymorphisms in 742 Mestizos of 10 populations from different regions in Mexico. The predominant maternal ancestry was Native American (92.9%), including Haplogroups A, B, C, and D (47, 23.7, 15.9, and 6.2%, respectively). Conversely, European and African ancestries were less frequent (5.3 and 1.9%, respectively). The main characteristics of the maternal lineages observed in Mexican-Mestizos comprised the following: 1) contrasting geographic gradient of Haplogroups A and C; 2) increase of European lineages toward the Northwest; 3) low or absent, but homogeneous, African ancestry throughout the Mexican territory; 4) maternal lineages in Mestizos roughly represent the genetic makeup of the surrounding Amerindian groups, particularly toward the Southeast, but not in the North and West; 5) continuity over time of the geographic distribution of Amerindian lineages in Mayas; and 6) low but significant maternal population structure (FST  = 2.8%; P = 0.0000). The average ancestry obtained from uniparental systems (mtDNA and Y-chromosome) in Mexican-Mestizos was correlated with previous ancestry estimates based on autosomal systems (genome-wide single-nucleotide polymorphisms and short tandem repeats). Finally, the comparison of paternal and maternal lineages provided additional information concerning the gender bias admixture, mating patterns, and population structure in Mestizos throughout the Mexican territory.

  9. Genetic admixture, relatedness, and structure patterns among Mexican populations revealed by the Y-chromosome.

    Science.gov (United States)

    Rangel-Villalobos, H; Muñoz-Valle, J F; González-Martín, A; Gorostiza, A; Magaña, M T; Páez-Riberos, L A

    2008-04-01

    Y-linked markers are suitable loci to analyze genetic diversity of human populations, offering knowledge of medical, forensic, and anthropological interest. In a population sample of 206 Mestizo males from western Mexico, we analyzed two binary loci (M3 and YAP) and six Y-STRs, adding to the analysis data of Mexican Mestizos and Amerindians, and relevant worldwide populations. The paternal ancestry estimated in western Mexican-Mestizos was mainly European (60-64%), followed by Amerindian (25-21%), and African ( approximately 15%). Significant genetic heterogeneity was established between Mestizos from western (Jalisco State) and northern Mexico (Chihuahua State) compared with Mexicans from the center of the Mexican Republic (Mexico City), this attributable to higher European ancestry in western and northern than in central and southeast populations, where higher Amerindian ancestry was inferred. This genetic structure has important implications for medical and forensic purposes. Two different Pre-Hispanic evolutionary processes were evident. In Mesoamerican region, populations presented higher migration rate (N(m) = 24.76), promoting genetic homogeneity. Conversely, isolated groups from the mountains and canyons of the Western and Northern Sierra Madre (Huichols and Tarahumaras, respectively) presented a lower migration rate (N(m) = 10.27) and stronger genetic differentiation processes (founder effect and/or genetic drift), constituting a Pre-Hispanic population substructure. Additionally, Tarahumaras presented a higher frequency of Y-chromosomes without Q3 that was explained by paternal European admixture (15%) and, more interestingly, by a distinctive Native-American ancestry. In Purepechas, a special admixture process involving preferential integration of non-Purepecha women in their communities could explain contrary genetic evidences (autosomal vs. Y-chromosome) for this tribe.

  10. Genetic origin, admixture, and asymmetry in maternal and paternal human lineages in Cuba

    Directory of Open Access Journals (Sweden)

    Martínez-Fuentes Antonio

    2008-07-01

    Full Text Available Abstract Background Before the arrival of Europeans to Cuba, the island was inhabited by two Native American groups, the Tainos and the Ciboneys. Most of the present archaeological, linguistic and ancient DNA evidence indicates a South American origin for these populations. In colonial times, Cuban Native American people were replaced by European settlers and slaves from Africa. It is still unknown however, to what extent their genetic pool intermingled with and was 'diluted' by the arrival of newcomers. In order to investigate the demographic processes that gave rise to the current Cuban population, we analyzed the hypervariable region I (HVS-I and five single nucleotide polymorphisms (SNPs in the mitochondrial DNA (mtDNA coding region in 245 individuals, and 40 Y-chromosome SNPs in 132 male individuals. Results The Native American contribution to present-day Cubans accounted for 33% of the maternal lineages, whereas Africa and Eurasia contributed 45% and 22% of the lineages, respectively. This Native American substrate in Cuba cannot be traced back to a single origin within the American continent, as previously suggested by ancient DNA analyses. Strikingly, no Native American lineages were found for the Y-chromosome, for which the Eurasian and African contributions were around 80% and 20%, respectively. Conclusion While the ancestral Native American substrate is still appreciable in the maternal lineages, the extensive process of population admixture in Cuba has left no trace of the paternal Native American lineages, mirroring the strong sexual bias in the admixture processes taking place during colonial times.

  11. Global genetic variation at OAS1 provides evidence of archaic admixture in Melanesian populations.

    Science.gov (United States)

    Mendez, Fernando L; Watkins, Joseph C; Hammer, Michael F

    2012-06-01

    Recent analysis of DNA extracted from two Eurasian forms of archaic human shows that more genetic variants are shared with humans currently living in Eurasia than with anatomically modern humans in sub-Saharan Africa. Although these genome-wide average measures of genetic similarity are consistent with the hypothesis of archaic admixture in Eurasia, analyses of individual loci exhibiting the signal of archaic introgression are needed to test alternative hypotheses and investigate the admixture process. Here, we provide a detailed sequence analysis of the innate immune gene OAS1, a locus with a divergent Melanesian haplotype that is very similar to the Denisova sequence from the Altai region of Siberia. We resequenced a 7-kb region encompassing the OAS1 gene in 88 individuals from six Old World populations (San, Biaka, Mandenka, French Basque, Han Chinese, and Papua New Guineans) and discovered previously unknown and ancient genetic variation. The 5' region of this gene has unusual patterns of diversity, including 1) higher levels of nucleotide diversity in Papuans than in sub-Saharan Africans, 2) very deep ancestry with an estimated time to the most recent common ancestor of >3 myr, and 3) a basal branching pattern with Papuan individuals on either side of the rooted network. A global geographic survey of >1,500 individuals showed that the divergent Papuan haplotype is nearly restricted to populations from eastern Indonesia and Melanesia. Polymorphic sites within this haplotype are shared with the draft Denisova genome over a span of ∼90 kb and are associated with an extended block of linkage disequilibrium, supporting the hypothesis that this haplotype introgressed from an archaic source that likely lived in Eurasia.

  12. Ancestry analysis reveals a predominant Native American component with moderate European admixture in Bolivians.

    Science.gov (United States)

    Heinz, Tanja; Alvarez-Iglesias, Vanesa; Pardo-Seco, Jacobo; Taboada-Echalar, Patricia; Gómez-Carballa, Alberto; Torres-Balanza, Antonio; Rocabado, Omar; Carracedo, Angel; Vullo, Carlos; Salas, Antonio

    2013-09-01

    We have genotyped 46 Ancestry Informative Markers (AIMs) in two of the most populated areas in Bolivia, namely, La Paz (Andean region; n=105), and Chuquisaca (Sub-Andean region; n=73). Using different analytical tools, we inferred admixture proportions of these two American communities by comparing the genetic profiles with those publicly available from the CEPH (Centre d'Etude du Polymorphisme Humain) panel representing three main continental groups (Africa, Europe, and America). By way of simulations, we first evaluated the minimum sample size needed in order to obtain accurate estimates of ancestry proportions. The results indicated that sample sizes above 30 individuals could be large enough to estimate main continental ancestry proportions using the 46 AIMs panel. With the exception of a few individuals, the results also indicated that Bolivians showed a predominantly Native American ancestry with variable levels of European admixture. The proportions of ancestry were statistically different in La Paz and Chuquisaca: the Native American component was 86% and 77% (Mann-Whitney U-test: un-adjusted P-value=2.1×10(-5)), while the European ancestry was 13% and 21% (Mann-Whitney U-test: un-adjusted P-value=3.6×10(-5)), respectively. The African ancestry in Bolivians captured by the AIMs analyzed in the present study was below 2%. The inferred ancestry of Bolivians fits well with previous studies undertaken on haplotype data, indicating a major proportion of Native American lineages. The genetic differences observed in these two groups suggest that forensic genetic analysis should be better performed based on local databases built in the main Bolivian areas.

  13. Sulfate resistance of concrete containing high volume of mineral admixtures[ACI SP-234-37

    Energy Technology Data Exchange (ETDEWEB)

    Irassar, E.F. [Buenos Aires Central State Univ., Olavarria (Argentina). Dept. of Civil Engineering; Batic, O.R. [La Plata Univ., (Argentina)]|[Commission of Scientific Research of Buenos Aires (Argentina); Di Maio, A. [La Plata Technilogical Univ. (Argentina)]|[CONICET-LEMIT (Argentina); Ponce, J.M. [LEMIT-CIC (Argentina)]|[La Plata Univ. (Argentina). Faculty of Natural Sciences

    2006-07-01

    Various physical and chemical processes that influence the durability of concrete structures were discussed. For underground or on grade structures, the durability of concrete depends on the chemical composition of concrete and the concentration of ionic species present in the soil or groundwater, the permeability of soil, exposition to water, the flow of water, and the shape and size of structure. It also depends on the quality of concrete in terms of compaction, water to cementitious ratio, cementitious content, type of cementitious materials, and curing process. The rate and course of concrete deterioration also depends on environmental conditions such as low temperature, temperature cycles between day and night, and the relative humidity of ambient air. Durable foundations in a sulfate environment require a low permeability concrete in order to assure good compaction and curing procedures. The type of cementitious material is also important in preventing deterioration. This paper summarized 15 years of results related to the effect of high volume mineral admixtures on the sulfate resistance of concrete. A mechanism of concrete degradation was presented based on macroscopic and microscopic behaviour. The physical and chemical attack produced by sulfate soils was emphasized. The presentation outlined the materials used, mixture proportions, curing, exposure conditions, inspection, compressive strength test methods and microstructural analyses. It was shown that a combination of portland cement with a high volume of appropriate fly ash, natural pozzolan or granulated blast-furnace slag provides an excellent performance for concrete structures buried in harsh alkali sulfate soils. Concretes with high volume of mineral admixtures are more susceptible to the physical salt attack caused by cycles of wetting and drying that produce progressive scaling and mass loss. 21 refs., 3 tabs., 11 figs.

  14. Admixture and population structure in Mexican-Mestizos based on paternal lineages.

    Science.gov (United States)

    Martínez-Cortés, Gabriela; Salazar-Flores, Joel; Fernández-Rodríguez, Laura Gabriela; Rubi-Castellanos, Rodrigo; Rodríguez-Loya, Carmen; Velarde-Félix, Jesús Salvador; Muñoz-Valle, José Franciso; Parra-Rojas, Isela; Rangel-Villalobos, Héctor

    2012-09-01

    In the nonrecombining region of the Y-chromosome, there are single-nucleotide polymorphisms (Y-SNPs) that establish haplogroups with particular geographical origins (European, African, Native American, etc.). The complex process of admixture that gave rise to the majority of the current Mexican population (~93%), known as Mestizos, can be examined with Y-SNPs to establish their paternal ancestry and population structure. We analyzed 18 Y-SNPs in 659 individuals from 10 Mexican-Mestizo populations from different regions of the country. In the total population sample, paternal ancestry was predominately European (64.9%), followed by Native American (30.8%) and African (4.2%). However, the European ancestry was prevalent in the north and west (66.7-95%) and, conversely, Native American ancestry increased in the center and southeast (37-50%), whereas the African ancestry was low and relatively homogeneous (0-8.8%). Although this paternal landscape concurs with previous studies based on genome-wide SNPs and autosomal short tandem repeats (STRs), this pattern contrasts with the maternal ancestry, mainly of Native American origin, based on maternal lineages haplogroups. In agreement with historical records, these results confirm a strong gender-biased admixture history between European males and Native American females that gave rise to Mexican-Mestizos. Finally, pairwise comparisons and analysis of molecular variance tests demonstrated significant population structure (F(ST)=4.68%; P<0.00005), delimiting clusters that were geographically defined as the following: north-west, center-south and southeast.

  15. Multilocus Bayesian Estimates of Intra-Oceanic Genetic Differentiation, Connectivity, and Admixture in Atlantic Swordfish (Xiphias gladius L..

    Directory of Open Access Journals (Sweden)

    Brad L Smith

    Full Text Available Previous genetic studies of Atlantic swordfish (Xiphias gladius L. revealed significant differentiation among Mediterranean, North Atlantic and South Atlantic populations using both mitochondrial and nuclear DNA data. However, limitations in geographic sampling coverage, and the use of single loci, precluded an accurate placement of boundaries and of estimates of admixture. In this study, we present multilocus analyses of 26 single nucleotide polymorphisms (SNPs within 10 nuclear genes to estimate population differentiation and admixture based on the characterization of 774 individuals representing North Atlantic, South Atlantic, and Mediterranean swordfish populations. Pairwise FST values, AMOVA, PCoA, and Bayesian individual assignments support the differentiation of swordfish inhabiting these three basins, but not the current placement of the boundaries that separate them. Specifically, the range of the South Atlantic population extends beyond 5°N management boundary to 20°N-25°N from 45°W. Likewise the Mediterranean population extends beyond the current management boundary at the Strait of Gibraltar to approximately 10°W. Further, admixture zones, characterized by asymmetric contributions of adjacent populations within samples, are confined to the Northeast Atlantic. While South Atlantic and Mediterranean migrants were identified within these Northeast Atlantic admixture zones no North Atlantic migrants were identified respectively in these two neighboring basins. Owing to both, the characterization of larger number of loci and a more ample spatial sampling coverage, it was possible to provide a finer resolution of the boundaries separating Atlantic swordfish populations than previous studies. Finally, the patterns of population structure and admixture are discussed in the light of the reproductive biology, the known patterns of dispersal, and oceanographic features that may act as barriers to gene flow to Atlantic swordfish.

  16. Domestic concrete admixture status and development trend%我国混凝土外加剂现状及发展趋势

    Institute of Scientific and Technical Information of China (English)

    宋飞虹

    2014-01-01

    介绍了我国混凝土外加剂的种类及应用,分析了外加剂研究与实践不匹配,各地混凝土外加剂生产不平衡等阻碍混凝土外加剂发展的问题,指出要加快对新品种减水剂的研究、更新外加剂标准,并促进外加剂的绿色化发展,以保证建筑业的可持续发展。%The paper introduces the types and application of the domestic concrete admixture,points out problems of influencing concrete admix-ture development,such as the mismatch of admixture research and practice and imbalance of concrete admixture production and other problems, and puts forwards some suggestions including speeding up the research of new water reducing admixture,renovating admixture criteria and pro-moting green admixture development,with a view to promote the sustainable development of building industry.

  17. A Generic Procedure for the Assessment of the Effect of Concrete Admixtures on the Sorption of Radionuclides on Cement: Concept and Selected Results

    Energy Technology Data Exchange (ETDEWEB)

    Glaus, M.A.; Laube, A.; Van Loon, L.R

    2004-03-01

    A screening procedure is proposed for the assessment of the effect of concrete admixtures on the sorption of radionuclides by cement. The procedure is both broad and generic, and can thus be used as input for the assessment of concrete admixtures which might be used in the future. The experimental feasibility and significance of the screening procedure are tested using selected concrete admixtures: i.e. sulfonated naphthalene-formaldehyde condensates, lignosulfonates, and a plasticiser used at PSI for waste conditioning. The effect of these on the sorption properties of Ni(II), Eu(III) and Th(IV) in cement is investigated using crushed Hardened Cement Paste (HCP), as well as cement pastes prepared in the presence of these admixtures. Strongly adverse effects on the sorption of the radionuclides tested are observed only in single cases, and under extreme conditions: i.e. at high ratios of concrete admixtures to HCP, and at low ratios of HCP to cement pore water. Under realistic conditions, both radionuclide sorption and the sorption of isosaccharinic acid (a strong complexant produced in cement-conditioned wastes containing cellulose) remain unaffected by the presence of concrete admixtures, which can be explained by the sorption of them onto the HCP. The pore-water concentrations of the concrete admixtures tested are thereby reduced to levels at which the formation of radionuclide complexes is no longer of importance. Further, the Langmuir sorption model, proposed for the sorption of concrete admixtures on HCP, suggests that the HCP surface does not become saturated, at least for those concrete admixtures tested. (author)

  18. RBC nuclear scan

    Science.gov (United States)

    ... page: //medlineplus.gov/ency/article/003835.htm RBC nuclear scan To use the sharing features on this page, please enable JavaScript. An RBC nuclear scan uses small amounts of radioactive material to ...

  19. Thyroid Scan and Uptake

    Medline Plus

    Full Text Available ... of the Thyroid Scan and Uptake? What is a Thyroid Scan and Uptake? A thyroid scan is ... encourage linking to this site. × Recommend RadiologyInfo to a friend Send to (friend's e-mail address): From ( ...

  20. Pulmonary ventilation/perfusion scan

    Science.gov (United States)

    V/Q scan; Ventilation/perfusion scan; Lung ventilation/perfusion scan ... A pulmonary ventilation/perfusion scan is actually two tests. They may be done separately or together. During the perfusion scan, a health care provider injects ...

  1. Semiconductor Surface Characterization by Scanning Probe Microscopies

    Science.gov (United States)

    2001-01-01

    potentiometry (STP)8 and ballistic electron emission microscopy (BEEM)9 which allow mapping of lateral surface potential and local subsurface Schottky...A.P.Fein. "Tunneling Spectroscopy of the Si(1 1 1)2xl Surface", Surf.Sci. 181, 295- 306, 1987. 8. P.Muralt, D.W.Pohl, "Scanning tunneling potentiometry

  2. Scan path entropy and Arrow plots: Capturing scanning behavior of multiple observers

    Directory of Open Access Journals (Sweden)

    Ignace T C Hooge

    2013-12-01

    Full Text Available Designers of visual communication material want their material to attract and retain attention. In marketing research, heat maps, dwell time, and time to AOI first hit are often used as evaluation parameters. Here we present two additional measures 1 scan path entropy to quantify gaze guidance and 2 the arrow plot to visualize the average scan path. Both are based on string representations of scan paths. The latter also incorporates transition matrices and time required for 50% of the observers to first hit AOIs (T50. The new measures were tested in an eye tracking study (48 observers, 39 advertisements. Scan path entropy is a sensible measure for gaze guidance and the new visualization method reveals aspects of the average scan path and gives a better indication in what order global scanning takes place.

  3. Influence of the Type and Method of Injection of Oxides Admixtures of Rare Earth Elements on Colour and other Properties of Dental Porcelain

    Institute of Scientific and Technical Information of China (English)

    Ekaterina A. Kulinich; Tamara A. Khabas; Vladimir I. Vereschagin

    2010-01-01

    A glassceramic material, which can be used in stomatology for production of dentinal layer of the dental crown multilayer coating, was received. In order to colour the material the admixtures of Tb and Ce compounds were used, as well as composite admixture representing a mixture of Ce, Nd and La oxides. It was demonstrated that the admixture of Tb oxide tones the material only when it is used together with Ce oxide. It was found that the more admixtures of rare earth elements oxides are contained in the sample composition, the higher the colour strength of the sintered material is. The wave length for the test samples is in the range of 600~650 nm, which corresponds to the yellow-orange and orange-red spectral range.

  4. The radiation stability of ground granulated blast furnace slag/ordinary Portland cement grouts containing organic admixtures

    Energy Technology Data Exchange (ETDEWEB)

    Palmer, J.D.; Fairhall, G.A. [British Nuclear Fuels, Sellafield (United Kingdom)

    1993-12-31

    At the British Nuclear Fuels (BNFL) Sellafield reprocessing plant in the United Kingdom, cement grouts based on ground granulated blast-furnace slag (BFS) and ordinary Portland cement (OPC) are used extensively for immobilizing radioactive wastes. These grouts have excluded organic admixtures in order to reduce process complexity and uncertainties, regarding the performance of organic admixtures with BFS/OPC grouts, particularly under irradiation. This study has investigated the effects of sulfonated melamine formaldehyde and naphthalene condensates on grout properties. The results show grout settlement and strengths increase on addition of additives, with the additives remaining largely in the pore solution. Under irradiation the additives breakdown liberating hydrogen and carbon dioxide. Strength and product dimensions are unaffected by irradiation.

  5. Mapping Quantitative Trait Loci (QTL in sheep. III. QTL for carcass composition traits derived from CT scans and aligned with a meta-assembly for sheep and cattle carcass QTL

    Directory of Open Access Journals (Sweden)

    Thomson Peter C

    2010-09-01

    Full Text Available Abstract An (Awassi × Merino × Merino single-sire backcross family with 165 male offspring was used to map quantitative trait loci (QTL for body composition traits on a framework map of 189 microsatellite loci across all autosomes. Two cohorts were created from the experimental progeny to represent alternative maturity classes for body composition assessment. Animals were raised under paddock conditions prior to entering the feedlot for a 90-day fattening phase. Body composition traits were derived in vivo at the end of the experiment prior to slaughter at 2 (cohort 1 and 3.5 (cohort 2 years of age, using computed tomography. Image analysis was used to gain accurate predictions for 13 traits describing major fat depots, lean muscle, bone, body proportions and body weight which were used for single- and two-QTL mapping analysis. Using a maximum-likelihood approach, three highly significant (LOD ≥ 3, 15 significant (LOD ≥ 2, and 11 suggestive QTL (1.7 ≤ LOD P P A meta-assembly of ovine QTL for carcass traits from this study and public domain sources was performed and compared with a corresponding bovine meta-assembly. The assembly demonstrated QTL with effects on carcass composition in homologous regions on OAR1, 2, 6 and 21.

  6. Influence of the calcium concentration in the presence of organic phosphorus on the physicochemical compatibility and stability of all-in-one admixtures for neonatal use

    Directory of Open Access Journals (Sweden)

    de Sousa Valeria

    2009-10-01

    Full Text Available Abstract Background Preterm infants need high amounts of calcium and phosphorus for bone mineralization, which is difficult to obtain with parenteral feeding due to the low solubility of these salts. The objective of this study was to evaluate the physicochemical compatibility of high concentrations of calcium associated with organic phosphate and its influence on the stability of AIO admixtures for neonatal use. Methods Three TPN admixture formulas were prepared in multilayered bags. The calcium content of the admixtures was adjusted to 0, 46.5 or 93 mg/100 ml in the presence of a fixed organic phosphate concentration as well as lipids, amino acids, inorganic salts, glucose, vitamins and oligoelements at pH 5.5. Each admixture was stored at 4°C, 25°C or 37°C and evaluated over a period of 7 days. The physicochemical stability parameters evaluated were visual aspect, pH, sterility, osmolality, peroxide formation, precipitation, and the size of lipid globules. Results Color alterations occurred from the first day on, and reversible lipid film formation from the third day of study for the admixtures stored at 25°C and 37°C. According to the parameters evaluated, the admixtures were stable at 4°C; and none of them presented precipitated particles due to calcium/phosphate incompatibility or lipid globules larger than 5 μm, which is the main parameter currently used to evaluate lipid emulsion stability. The admixtures maintained low peroxide levels and osmolarity was appropriate for parenteral administration. Conclusion The total calcium and calcium/phosphorus ratios studied appeared not to influence the physicochemical compatibility and stability of AIO admixtures.

  7. Nuclear species-diagnostic SNP markers mined from 454 amplicon sequencing reveal admixture genomic structure of modern citrus varieties.

    Science.gov (United States)

    Curk, Franck; Ancillo, Gema; Ollitrault, Frédérique; Perrier, Xavier; Jacquemoud-Collet, Jean-Pierre; Garcia-Lor, Andres; Navarro, Luis; Ollitrault, Patrick

    2015-01-01

    Most cultivated Citrus species originated from interspecific hybridisation between four ancestral taxa (C. reticulata, C. maxima, C. medica, and C. micrantha) with limited further interspecific recombination due to vegetative propagation. This evolution resulted in admixture genomes with frequent interspecific heterozygosity. Moreover, a major part of the phenotypic diversity of edible citrus results from the initial differentiation between these taxa. Deciphering the phylogenomic structure of citrus germplasm is therefore essential for an efficient utilization of citrus biodiversity in breeding schemes. The objective of this work was to develop a set of species-diagnostic single nucleotide polymorphism (SNP) markers for the four Citrus ancestral taxa covering the nine chromosomes, and to use these markers to infer the phylogenomic structure of secondary species and modern cultivars. Species-diagnostic SNPs were mined from 454 amplicon sequencing of 57 gene fragments from 26 genotypes of the four basic taxa. Of the 1,053 SNPs mined from 28,507 kb sequence, 273 were found to be highly diagnostic for a single basic taxon. Species-diagnostic SNP markers (105) were used to analyse the admixture structure of varieties and rootstocks. This revealed C. maxima introgressions in most of the old and in all recent selections of mandarins, and suggested that C. reticulata × C. maxima reticulation and introgression processes were important in edible mandarin domestication. The large range of phylogenomic constitutions between C. reticulata and C. maxima revealed in mandarins, tangelos, tangors, sweet oranges, sour oranges, grapefruits, and orangelos is favourable for genetic association studies based on phylogenomic structures of the germplasm. Inferred admixture structures were in agreement with previous hypotheses regarding the origin of several secondary species and also revealed the probable origin of several acid citrus varieties. The developed species-diagnostic SNP

  8. On the use of crystalline admixtures in cement based construction materials: from porosity reducers to promoters of self healing

    Science.gov (United States)

    Ferrara, Liberato; Krelani, Visar; Moretti, Fabio

    2016-08-01

    The project detailed in this paper aims at a thorough characterization of the effects of crystalline admixtures, currently employed as porosity reducing admixtures, on the self-healing capacity of the cementitious composites, i.e. their capacity to completely or partially re-seal cracks and, in case, also exhibit recovery of mechanical properties. The problem has been investigated with reference to both a normal strength concrete (NSC) and a high performance fibre reinforced cementitious composite (HPFRCC). In the latter case, the influence of flow-induced fibre alignment has also been considered in the experimental investigation. With reference to either 3-point (for NSC) or 4-point (for HPFRCC) bending tests performed up to controlled crack opening and up to failure, respectively before and after exposure/conditioning recovery of stiffness and stress bearing capacity has been evaluated to assess the self-healing capacity. In a durability-based design framework, self-healing indices to quantify the recovery of mechanical properties will also be defined. In NSC, crystalline admixtures are able to promote up to 60% of crack sealing even under exposure to open air. In the case of HPFRCCs, which would already feature autogenous healing capacity because of their peculiar mix compositions, the synergy between the dispersed fibre reinforcement and the action of the crystalline admixture has resulted in a likely ‘chemical pre-stressing’ of the same reinforcement, from which the recovery of mechanical performance of the material has greatly benefited, up to levels even higher than the performance of the virgin un-cracked material.

  9. Cuba: exploring the history of admixture and the genetic basis of pigmentation using autosomal and uniparental markers.

    Science.gov (United States)

    Marcheco-Teruel, Beatriz; Parra, Esteban J; Fuentes-Smith, Evelyn; Salas, Antonio; Buttenschøn, Henriette N; Demontis, Ditte; Torres-Español, María; Marín-Padrón, Lilia C; Gómez-Cabezas, Enrique J; Alvarez-Iglesias, Vanesa; Mosquera-Miguel, Ana; Martínez-Fuentes, Antonio; Carracedo, Angel; Børglum, Anders D; Mors, Ole

    2014-07-01

    We carried out an admixture analysis of a sample comprising 1,019 individuals from all the provinces of Cuba. We used a panel of 128 autosomal Ancestry Informative Markers (AIMs) to estimate the admixture proportions. We also characterized a number of haplogroup diagnostic markers in the mtDNA and Y-chromosome in order to evaluate admixture using uniparental markers. Finally, we analyzed the association of 16 single nucleotide polymorphisms (SNPs) with quantitative estimates of skin pigmentation. In the total sample, the average European, African and Native American contributions as estimated from autosomal AIMs were 72%, 20% and 8%, respectively. The Eastern provinces of Cuba showed relatively higher African and Native American contributions than the Western provinces. In particular, the highest proportion of African ancestry was observed in the provinces of Guantánamo (40%) and Santiago de Cuba (39%), and the highest proportion of Native American ancestry in Granma (15%), Holguín (12%) and Las Tunas (12%). We found evidence of substantial population stratification in the current Cuban population, emphasizing the need to control for the effects of population stratification in association studies including individuals from Cuba. The results of the analyses of uniparental markers were concordant with those observed in the autosomes. These geographic patterns in admixture proportions are fully consistent with historical and archaeological information. Additionally, we identified a sex-biased pattern in the process of gene flow, with a substantially higher European contribution from the paternal side, and higher Native American and African contributions from the maternal side. This sex-biased contribution was particularly evident for Native American ancestry. Finally, we observed that SNPs located in the genes SLC24A5 and SLC45A2 are strongly associated with melanin levels in the sample.

  10. Apparent variation in Neanderthal admixture among African populations is consistent with gene flow from Non-African populations.

    Science.gov (United States)

    Wang, Shuoguo; Lachance, Joseph; Tishkoff, Sarah A; Hey, Jody; Xing, Jinchuan

    2013-01-01

    Recent studies have found evidence of introgression from Neanderthals into modern humans outside of sub-Saharan Africa. Given the geographic range of Neanderthals, the findings have been interpreted as evidence of gene exchange between Neanderthals and modern humans descended from the Out-of-Africa (OOA) migration. Here, we examine an alternative interpretation in which the introgression occurred earlier within Africa, between ancestors or relatives of Neanderthals and a subset of African modern humans who were the ancestors of those involved in the OOA migration. Under the alternative model, if the population structure among present-day Africans predates the OOA migration, we might find some African populations show a signal of Neanderthal introgression whereas others do not. To test this alternative model, we compiled a whole-genome data set including 38 sub-Saharan Africans from eight populations and 25 non-African individuals from five populations. We assessed differences in the amount of Neanderthal-like single-nucleotide polymorphism alleles among these populations and observed up to 1.5% difference in the number of Neanderthal-like alleles among African populations. Further analyses suggest that these differences are likely due to recent non-African admixture in these populations. After accounting for recent non-African admixture, our results do not support the alternative model of older (e.g., >100 kya) admixture between modern humans and Neanderthal-like hominids within Africa.

  11. The Influence of Mineral Admixtures on Bending Strength of Mortar on the Premise of Equal Compressive Strength

    Institute of Scientific and Technical Information of China (English)

    WANG Qiang; YAN Peiyu; FENG Jianwen

    2012-01-01

    The influence of mineral admixtures on bending strength of mortar on the premise of equal compressive strength was investigated.Three mineral admixtures (fly ash,ground granulated blast-furnace slag and steel slag) were used.The adding amount of mineral admixture in this study ranges from 22.5% to 60%,and the water-to-binder ratio ranges from 0.34 to 0.50.With equal compressive strength,different mortars can be arranged in such a descending order with their bending strength:cement-fly ash mortar,cement mortar,cement-GGBS mortar,and cement-steel slag mortar.With the same compressive strength,the higher the steel slag content and water-to-binder ratio,the lower the bending strength of mortars.However,the effect of mineral mixture content and water-to-binder ratio on the bending strength of cement-fly ash mortar and cement-GGBS mortar is far inconspicuous.

  12. Body fat and racial genetic admixture are associated with aerobic fitness levels in a multiethnic pediatric population.

    Science.gov (United States)

    Willig, Amanda L; Hunter, Gary R; Casazza, Krista; Heimburger, Douglas C; Beasley, T Mark; Fernandez, Jose R

    2011-11-01

    Aerobic fitness and adiposity are each independently associated with health outcomes among children, although the relationship between these two variables is unclear. Our objectives were to evaluate (i) the association of adiposity with aerobic fitness using objectively measured levels of percent body fat, compared to BMI as a percentile proxy for adiposity while controlling for genetic admixture, and (ii) the congruence of BMI categories with high and low body fat categories of objectively measured percent body fat. Participants were 232 African-American (AA), European-American (EA), and Hispanic-American (HA) children aged 7-12 years (Tanner stage body fat group (body fat group based on their percent body fat; children were also categorized according to BMI percentile. Children in the low body fat group had significantly higher aerobic fitness (P BMI percentile classification. Higher African genetic admixture was associated with lower aerobic fitness (P body fat and genetic admixture irrespective of BMI classification, and such differences should be taken into account when evaluating outcomes of health interventions.

  13. Genetic structure and admixture between Bayash Roma from northwestern Croatia and general Croatian population: evidence from Bayesian clustering analysis.

    Science.gov (United States)

    Novokmet, Natalija; Galov, Ana; Marjanović, Damir; Škaro, Vedrana; Projić, Petar; Lauc, Gordan; Primorac, Dragan; Rudan, Pavao

    2015-01-01

    The European Roma represent a transnational mosaic of minority population groups with different migration histories and contrasting experiences in their interactions with majority populations across the European continent. Although historical genetic contributions of European lineages to the Roma pool were investigated before, the extent of contemporary genetic admixture between Bayash Roma and non-Romani majority population remains elusive. The aim of this study was to assess the genetic structure of the Bayash Roma population from northwestern Croatia and the general Croatian population and to investigate the extent of admixture between them. A set of genetic data from two original studies (100 Bayash Roma from northwestern Croatia and 195 individuals from the general Croatian population) was analyzed by Bayesian clustering implemented in STRUCTURE software. By re-analyzing published data we intended to focus for the first time on genetic differentiation and structure and in doing so we clearly pointed to the importance of considering social phenomena in understanding genetic structuring. Our results demonstrated that two population clusters best explain the genetic structure, which is consistent with social exclusion of Roma and the demographic history of Bayash Roma who have settled in NW Croatia only about 150 years ago and mostly applied rules of endogamy. The presence of admixture was revealed, while the percentage of non-Croatian individuals in general Croatian population was approximately twofold higher than the percentage of non-Romani individuals in Roma population corroborating the presence of ethnomimicry in Roma.

  14. Laser Scanning in Forests

    OpenAIRE

    Håkan Olsson; Juha Hyyppä; Markus Holopainen

    2012-01-01

    The introduction of Airborne Laser Scanning (ALS) to forests has been revolutionary during the last decade. This development was facilitated by combining earlier ranging lidar discoveries [1–5], with experience obtained from full-waveform ranging radar [6,7] to new airborne laser scanning systems which had components such as a GNSS receiver (Global Navigation Satellite System), IMU (Inertial Measurement Unit) and a scanning mechanism. Since the first commercial ALS in 1994, new ALS-based fore...

  15. Radionucleotide scanning in osteomyelitis

    Energy Technology Data Exchange (ETDEWEB)

    Sachs, W.; Kanat, I.O.

    1986-07-01

    Radionucleotide bone scanning can be an excellent adjunct to the standard radiograph and clinical findings in the diagnosis of osteomyelitis. Bone scans have the ability to detect osteomyelitis far in advance of the standard radiograph. The sequential use of technetium and gallium has been useful in differentiating cellulitis and osteomyelitis. Serial scanning with technetium and gallium may be used to monitor the response of osteomyelitis to antibiotic therapy.

  16. Almost 20 years of Neanderthal palaeogenetics: adaptation, admixture, diversity, demography and extinction.

    Science.gov (United States)

    Sánchez-Quinto, Federico; Lalueza-Fox, Carles

    2015-01-19

    Nearly two decades since the first retrieval of Neanderthal DNA, recent advances in next-generation sequencing technologies have allowed the generation of high-coverage genomes from two archaic hominins, a Neanderthal and a Denisovan, as well as a complete mitochondrial genome from remains which probably represent early members of the Neanderthal lineage. This genomic information, coupled with diversity exome data from several Neanderthal specimens is shedding new light on evolutionary processes such as the genetic basis of Neanderthal and modern human-specific adaptations-including morphological and behavioural traits-as well as the extent and nature of the admixture events between them. An emerging picture is that Neanderthals had a long-term small population size, lived in small and isolated groups and probably practised inbreeding at times. Deleterious genetic effects associated with these demographic factors could have played a role in their extinction. The analysis of DNA from further remains making use of new large-scale hybridization-capture-based methods as well as of new approaches to discriminate contaminant DNA sequences will provide genetic information in spatial and temporal scales that could help clarify the Neanderthal's-and our very own-evolutionary history.

  17. Admixture between native and invasive populations may increase invasiveness of Mimulus guttatus.

    Science.gov (United States)

    van Kleunen, Mark; Röckle, Michael; Stift, Marc

    2015-09-22

    Self-fertilization and admixture of genotypes from different populations can have major fitness consequences in native species. However, few studies have addressed their potential roles in invasive species. Here, we used plants of Mimulus guttatus from seven native North American, three invasive Scottish and four invasive New Zealand populations to address this. We created seeds from self-fertilization, within-population outcrossing, between-population outcrossing within the same range, and outcrossing between the native and invasive ranges. A greenhouse experiment showed that native and invasive plants of M. guttatus suffered to similar degrees from inbreeding depression, in terms of asexual reproduction and biomass production. After outcrossing with plants from other populations, M. guttatus benefited from heterosis, in terms of asexual and sexual reproduction, and biomass production, particularly when plants from native and invasive populations were crossed. This suggests that, when novel genotypes of M. guttatus from the native North American range will be introduced to the invasive ranges, subsequent outcrossing with M. guttatus plants that are already there might further boost invasiveness of this species.

  18. Influence of CG With High Content of Metallic Particles as a Cement Admixture on Cement Strength

    Institute of Scientific and Technical Information of China (English)

    WAN Hui-wen; LIN Zong-shou; ZHAO Qian; HUANG Yun

    2003-01-01

    Copper gangue (CG), containing a large amount of water with grain sizes of 0.037 to 0.10mm,is an inactive industrial waste generated from copper refineries. When it is dried and used as a cement admixture, the influence of the presence of finely dispersed metallic particles in CG on the microstructure and compressive strength of cement paste has been studied.The results show that the higher the replacement of CG is,the lower the compressive strength of cement mortar is.However,the long-term strength of the specimens with 10% CG,especially after being cured for 3 months,approached to that of the plain mortar.Its mechanism was studied by an electron probe X-ray microanalyzer (EPXMA).The results indicate that a small quantity of Fe(OH)3·nH2O slowly formed from Fe2O3 in the presence of Ca(OH)2, free CaO and MgO of the clinker also slowly hydrated and formed Ca(OH)2 and Mg(OH)2 respectively,so the hardened cement paste became more compact.

  19. Genetics, surnames, grandparents' nationalities, and ethnic admixture in Southern Brazil: Do the patterns of variation coincide?

    Directory of Open Access Journals (Sweden)

    C.L. Dornelles

    1999-06-01

    Full Text Available A total of 2,708 individuals from the European-derived population of Rio Grande do Sul, divided into seven mesoregions, and of 226 individuals of similar origin from Santa Catarina were studied. Seventeen protein genetic systems, as well as grandparents' nationalities, individuals' surnames, and interethnic admixture were investigated. The alleles which presented the highest and lowest differences were GLO1*2 (16% and PGD*A (2%, respectively, but in general no significant genetic differences were found among mesoregions. The values observed were generally those expected for individuals of European descent, with the largest difference being a lower prevalence (34-39% of P*1. Significant heterogeneity among mesoregions was observed for the other variables considered, and was consistent with historical records. The Amerindian contribution to the gene pool of European-derived subjects in Rio Grande do Sul was estimated to be as high as 11%. Based on the four data sets, the most general finding was a tendency for a northeast-southwest separation of the populations studied. Seven significant phenotype associations between systems were observed at the 5% level (three at the 0.1% level. Of the latter, the two most interesting (since they were also observed in other studies were MNSs/Duffy and Rh/ACP.

  20. Genetics, surnames, grandparents' nationalities, and ethnic admixture in Southern Brazil: Do the patterns of variation coincide?

    Directory of Open Access Journals (Sweden)

    Dornelles C.L.

    1999-01-01

    Full Text Available A total of 2,708 individuals from the European-derived population of Rio Grande do Sul, divided into seven mesoregions, and of 226 individuals of similar origin from Santa Catarina were studied. Seventeen protein genetic systems, as well as grandparents' nationalities, individuals' surnames, and interethnic admixture were investigated. The alleles which presented the highest and lowest differences were GLO1*2 (16% and PGD*A (2%, respectively, but in general no significant genetic differences were found among mesoregions. The values observed were generally those expected for individuals of European descent, with the largest difference being a lower prevalence (34-39% of P*1. Significant heterogeneity among mesoregions was observed for the other variables considered, and was consistent with historical records. The Amerindian contribution to the gene pool of European-derived subjects in Rio Grande do Sul was estimated to be as high as 11%. Based on the four data sets, the most general finding was a tendency for a northeast-southwest separation of the populations studied. Seven significant phenotype associations between systems were observed at the 5% level (three at the 0.1% level. Of the latter, the two most interesting (since they were also observed in other studies were MNSs/Duffy and Rh/ACP.

  1. Use of admixtures in organic-contaminated cement-clay pastes.

    Science.gov (United States)

    Gallo Stampino, Paola; Zampori, Luca; Dotelli, Giovanni; Meloni, Paola; Sora, Isabella Natali; Pelosato, Renato

    2009-01-30

    In this work microstructure, porosity and hydration degree of cement-based solidified/stabilized wasteforms were studied before assessing their leaching behaviour. 2-Chloroaniline was chosen as a model liquid organic pollutant and included into cement pastes, which were also modified with different admixtures for concrete: a superplasticizer based on acrylic-modified polymer, a synthetic rubber latex and a waterproofing agent. An organoclay, modified with an ammonium quaternary salt (benzyl-dimethyl-tallowammonium, BDMTA), was added to the pastes as pre-sorbent agent of the organic matter. All the samples were dried up to constant weight in order to stop the hydration process at different times during the first 28 days of curing, typically, after 1 day (1d), 7 days (7d) and 28 days. Then, the microstructure of the hardened cement-clay pastes was investigated by powder X-ray diffraction (XRD). The hydration degree and porosity were studied by thermal analysis (TG/DTA) and mercury intrusion porosimetry (MIP), respectively. For samples cured for 28 days a short-term leach test set by Italian regulation for industrial waste recycling (D.M. 5 February 1998) was performed. The best results showed a 5% release of the total initial amount of organic pollutant.

  2. Socioeconomic Status and Lung Cancer: Unraveling the Contribution of Genetic Admixture

    Science.gov (United States)

    Selvin, Steve; Wrensch, Margaret R.; Sison, Jennette D.; Hansen, Helen M.; Quesenberry, Charles P.; Seldin, Michael F.; Barcellos, Lisa F.; Buffler, Patricia A.; Wiencke, John K.

    2013-01-01

    Objectives. We examined the relationship between genetic ancestry, socioeconomic status (SES), and lung cancer among African Americans and Latinos. Methods. We evaluated SES and genetic ancestry in a Northern California lung cancer case–control study (1998–2003) of African Americans and Latinos. Lung cancer case and control participants were frequency matched on age, gender, and race/ethnicity. We assessed case–control differences in individual admixture proportions using the 2-sample t test and analysis of covariance. Logistic regression models examined associations among genetic ancestry, socioeconomic characteristics, and lung cancer. Results. Decreased Amerindian ancestry was associated with higher education among Latino control participants and greater African ancestry was associated with decreased education among African lung cancer case participants. Education was associated with lung cancer among both Latinos and African Americans, independent of smoking, ancestry, age, and gender. Genetic ancestry was not associated with lung cancer among African Americans. Conclusions. Findings suggest that socioeconomic factors may have a greater impact than genetic ancestry on lung cancer among African Americans. The genetic heterogeneity and recent dynamic migration and acculturation of Latinos complicate recruitment; thus, epidemiological analyses and findings should be interpreted cautiously. PMID:23948011

  3. Effect of negative gases admixture on the stability of beam-driven discharges

    Science.gov (United States)

    Levko, Dmitry; Raja, Laxminarayan L.

    2016-12-01

    The influence of negative gas SF6 admixture on the stability of low-pressure beam-driven discharge is studied by self-consistent 1D particle-in-cell/Monte Carlo collisions model. We find that the plasma parameters as well as its stability are changed drastically when SF6 is added to argon gas. In an electropositive plasma we obtain the excitation of both fast and slow electrostatic plasma waves which is explained by the propagation of electron beam through the non-homogeneous bounded plasma. These waves lead to the heating of plasma electrons and ions. On the other hand, in electronegative plasma we also obtain a decay of the electron beam. However, since in electronegative beam-generated plasma the electron plasma density is homogeneous the beam is more stable. As a consequence, we obtain only the excitation of two fast electrostatic waves. One wave is excited due to two-stream instability and another wave is excited due to beam decay. The excitation of these fast waves does not influence the plasma homogeneity but influences the heating of plasma electrons.

  4. Racial and ethnic differences in assisted reproduction treatment outcomes: the benefit of racial admixture.

    Science.gov (United States)

    Braga, Daniela Paes Almeida Ferreira; Setti, Amanda S; Iaconelli, Assumpto; Taitson, Paulo Franco; Borges, Edson

    2015-01-01

    The goal of the present study was to determine whether racial and ethnic differences affect the outcomes of assisted reproductive technology in the Brazilian population. 1497 patients undergoing intracytoplasmic sperm injection (ICSI) cycles were split into groups according to the patient's ethnicity: Caucasian (n = 2131), Mestizo (n = 358), Asian (n = 174), Black (n = 115) and Indian (n = 260). ICSI outcomes were compared among the groups. Body mass index was highest in the Black group, followed by the Mestizo, Indian, Caucasian and Asian groups (p > 0.001). The FSH dose (p > 0.001) was highest among Indians, followed by Asians and Caucasians, and the dose was lowest among Blacks and Mestizos. In contrast, the oocyte yield was highest among Mestizos, followed by Indians, Blacks and Caucasians, and lowest among Asians (p = 0.005). The fertilisation rate was highest among Mestizos, followed by Blacks, Indians and Caucasians, whereas Asians had the lowest fertilisation rate (p = 0.004). Pregnancy and implantation rates were also highest among Mestizos, followed by Blacks, Indians and Caucasians, whereas the Asian patients had the lowest rates (p = 0.008 and p > 0.001, respectively). In conclusion, our evidence suggests a possible beneficial effect of racial admixture on ICSI outcomes.

  5. Binding Materials of Dehydrated Phases of Waste Hardened Cement Paste and Pozzolanic Admixture

    Institute of Scientific and Technical Information of China (English)

    LU Linnu; HE Yongjia; HU Shuguang

    2009-01-01

    Fly ash (FA) and ground granulated blast-furnace slag (GGBFS) were added to improve the performances of regenerated binding materials (RBM) which refer to dehydrated phases with rebinding ability of waste hardened cement paste. Flowability tests, compressive strength tests,SEM, TG-DSC, and non-evaporable water content tests were employed to study the performances of the combined binding materials and the interactions between RBM, FA, and GGBFS. Results show that adding FA or GGBFS can improve the workability of RBM paste, and GGBFS has positive effects on strength of RBM. Pozzolanic reactions happen between RBM, FA, and GGBFS. And the activation effect of RBM to FA and GGBFS is superior to that of P.O grade-32.5 cement, especially at earlier ages, because of the high reactive f-CaO existing in RBM. On the advantages of the synergetic effects of RBM and pozzolanic admixtures such as FA and GGBFS, new combined binding materials can be prepared by blending them together.

  6. An RP-HPLC-UV method with SPE for cefotaxime in all-in-one total parenteral nutritional admixtures: application to stability studies.

    Science.gov (United States)

    Iqbal, Muhammad Shahid; Bahari, Mohd Baidi; Darwis, Yusrida; Iqbal, Muhammad Zahid; Hayat, Amer; Venkatesh, Gantala

    2013-01-01

    A simple and selective RP-HPLC-UV method with SPE was developed and validated for the quantification of cefotaxime in all-in-one total parenteral nutrition (AIO-TPN) admixtures. Chromatographic separation was achieved on a 5 pm particle size C18 DB column (250 x 4.6 mm id) using the mobile phase ammonium acetate (25 mM, pH 4.0)-50% acetonitrile in methanol (80 + 20, v/v). The flow rate was 0.9 mL/min and the detection wavelength was 254 nm. The analyte was extracted from AIO-TPN admixtures by means of an SPE method. The cefotaxime calibration curve was linear over a concentration range of 100-1400 microg/mL with a correlation coefficient of > or = 0.9994. The intraday accuracy and precision for cefotaxime were cefotaxime in the presence of micronutrients together with low and high concentrations of macronutrients in AIO-TPN admixtures. Cefotaxime was degraded by 13.00 and 26.05% at room temperature (25 +/- 2 degrees C) after 72 h in low and high macronutrient concentration formulations of AIO-TPN admixtures, respectively. The values of cefotaxime degradation rates for low and high macronutrient concentration formulations of AIO-TPN admixtures were -0.164 and -0.353, respectively. These results indicated that there was a higher rate of degradation in the AIO-TPN admixture formulations containing high concentrations of macronutrients.

  7. Mapping Quantitative Trait Loci (QTL) in sheep. III. QTL for carcass composition traits derived from CT scans and aligned with a meta-assembly for sheep and cattle carcass QTL.

    Science.gov (United States)

    Cavanagh, Colin R; Jonas, Elisabeth; Hobbs, Matthew; Thomson, Peter C; Tammen, Imke; Raadsma, Herman W

    2010-09-16

    An (Awassi × Merino) × Merino single-sire backcross family with 165 male offspring was used to map quantitative trait loci (QTL) for body composition traits on a framework map of 189 microsatellite loci across all autosomes. Two cohorts were created from the experimental progeny to represent alternative maturity classes for body composition assessment. Animals were raised under paddock conditions prior to entering the feedlot for a 90-day fattening phase. Body composition traits were derived in vivo at the end of the experiment prior to slaughter at 2 (cohort 1) and 3.5 (cohort 2) years of age, using computed tomography. Image analysis was used to gain accurate predictions for 13 traits describing major fat depots, lean muscle, bone, body proportions and body weight which were used for single- and two-QTL mapping analysis. Using a maximum-likelihood approach, three highly significant (LOD ≥ 3), 15 significant (LOD ≥ 2), and 11 suggestive QTL (1.7 ≤ LOD < 2) were detected on eleven chromosomes. Regression analysis confirmed 28 of these QTL and an additional 17 suggestive (P < 0.1) and two significant (P < 0.05) QTL were identified using this method. QTL with pleiotropic effects for two or more tissues were identified on chromosomes 1, 6, 10, 14, 16 and 23. No tissue-specific QTL were identified.A meta-assembly of ovine QTL for carcass traits from this study and public domain sources was performed and compared with a corresponding bovine meta-assembly. The assembly demonstrated QTL with effects on carcass composition in homologous regions on OAR1, 2, 6 and 21.

  8. Bone scanning in otolaryngology.

    Science.gov (United States)

    Noyek, A M

    1979-09-01

    Modern radionuclide bone scanning has introduced a new concept in physiologic and anatomic diagnostic imaging to general medicine. As otolaryngologists must diagnose and treat disease in relation to the bony and/or cartilaginous supporting structures of the neurocranium and upper airway, this modality should be included in the otolaryngologist's diagnostic armamentarium. It is the purpose of this manuscript to study the specific applications of bone scanning to our specialty at this time, based on clinical experience over the past three years. This thesis describes the development of bone scanning in general (history of nuclear medicine and nuclear physics; history of bone scanning in particular). General concepts in nuclear medicine are then presented; these include a discussion of nuclear semantics, principles of radioactive emmissions, the properties 99mTc as a radionuclide, and the tracer principle. On the basis of these general concepts, specific concepts in bone scanning are then brought forth. The physiology of bone and the action of the bone scan agents is presented. Further discussion considers the availability and production of the bone scan agent, patient factors, the gamma camera, the triphasic bone scan and the ultimate diagnostic principle of the bone scan. Clinical applications of bone scanning in otolaryngology are then presented in three sections. Proven areas of application include the evaluation of malignant tumors of the head and neck, the diagnosis of temporomandibular joint disorders, the diagnosis of facial fractures, the evaluation of osteomyelitis, nuclear medicine imaging of the larynx, and the assessment of systemic disease. Areas of adjunctive or supplementary value are also noted, such as diagnostic imaging of meningioma. Finally, areas of marginal value in the application of bone scanning are described.

  9. Scanning laser Doppler vibrometry

    DEFF Research Database (Denmark)

    Brøns, Marie; Thomsen, Jon Juel

    With a Scanning Laser Doppler Vibrometer (SLDV) a vibrating surface is automatically scanned over predefined grid points, and data processed for displaying vibration properties like mode shapes, natural frequencies, damping ratios, and operational deflection shapes. Our SLDV – a PSV-500H from...

  10. Frequency scanning microstrip antennas

    DEFF Research Database (Denmark)

    Danielsen, Magnus; Jørgensen, Rolf

    1979-01-01

    The principles of using radiating microstrip resonators as elements in a frequency scanning antenna array are described. The resonators are cascade-coupled. This gives a scan of the main lobe due to the phase-shift in the resonator in addition to that created by the transmission line phase...

  11. Optical Scanning Applications.

    Science.gov (United States)

    Wagner, Hans

    The successful use of optical scanning at the University of the Pacific (UOP) indicates that such techniques can simplify a number of administrative data processing tasks. Optical scanning is regularly used at UOP to assist with data processing in the areas of admissions, registration and grade reporting and also has applications for other tasks…

  12. Interactions between genetic admixture, ethnic identity, APOE genotype and dementia prevalence in an admixed Cuban sample; a cross-sectional population survey and nested case-control study

    Directory of Open Access Journals (Sweden)

    Hernandez Milagros

    2011-03-01

    Full Text Available Abstract Background The prevalence and incidence of dementia are low in Nigeria, but high among African-Americans. In these populations there is a high frequency of the risk-conferring APOE-e4 allele, but the risk ratio is less than in Europeans. In an admixed population of older Cubans we explored the effects of ethnic identity and genetic admixture on APOE genotype, its association with dementia, and dementia prevalence. Methods A cross-sectional catchment area survey of 2928 residents aged 65 and over, with a nested case-control study of individual admixture. Dementia diagnosis was established using 10/66 Dementia and DSM-IV criteria. APOE genotype was determined in 2520 participants, and genetic admixture in 235 dementia cases and 349 controls. Results Mean African admixture proportions were 5.8% for 'white', 28.6% for 'mixed' and 49.6% for 'black' ethnic identities. All three groups were substantially admixed with considerable overlap. African admixture was linearly related to number of APOE-e4 alleles. One or more APOE-e4 alleles was associated with dementia in 'white' and 'black' but not 'mixed' groups but neither this, nor the interaction between APOE-e4 and African admixture (PR 0.52, 95% CI 0.13-2.08 were statistically significant. Neither ethnic identity nor African admixture was associated with dementia prevalence when assessed separately. However, considering their joint effects African versus European admixture was independently associated with a higher prevalence, and 'mixed' or 'black' identity with a lower prevalence of dementia. Conclusions APOE genotype is strongly associated with ancestry. Larger studies are needed to confirm whether the concentration of the high-risk allele in those with African ancestry is offset by an attenuation of its effect. Counter to our hypothesis, African admixture may be associated with higher risk of dementia. Although strongly correlated, effects of admixture and ethnic identity should be

  13. LIDAR COMBINED SCANNING UNIT

    Directory of Open Access Journals (Sweden)

    V. V. Elizarov

    2016-11-01

    Full Text Available Subject of Research. The results of lidar combined scanning unit development for locating leaks of hydrocarbons are presented The unit enables to perform high-speed scanning of the investigated space in wide and narrow angle fields. Method. Scanning in a wide angular field is produced by one-line scanning path by means of the movable aluminum mirror with a frequency of 20Hz and amplitude of 20 degrees of swing. Narrowband scanning is performed along a spiral path by the deflector. The deflection of the beam is done by rotation of the optical wedges forming part of the deflector at an angle of ±50. The control function of the scanning node is performed by a specialized software product written in C# programming language. Main Results. This scanning unit allows scanning the investigated area at a distance of 50-100 m with spatial resolution at the level of 3 cm. The positioning accuracy of the laser beam in space is 15'. The developed scanning unit gives the possibility to browse the entire investigated area for the time not more than 1 ms at a rotation frequency of each wedge from 50 to 200 Hz. The problem of unambiguous definition of the beam geographical coordinates in space is solved at the software level according to the rotation angles of the mirrors and optical wedges. Lidar system coordinates are determined by means of GPS. Practical Relevance. Development results open the possibility for increasing the spatial resolution of scanning systems of a wide range of lidars and can provide high positioning accuracy of the laser beam in space.

  14. 利用HapMap数据发现人类基因组中正选择的"候选区域%A Genome Scanning for Regions Under Selective Sweep Based on HapMap Data

    Institute of Scientific and Technical Information of China (English)

    汪雁; 汤哓丽; 陈极光; 肖俐; 方进; 龙飞; 邓立彬

    2010-01-01

    人类基因组国际单体型图计划(The International Haplotype Map Project,HapMap)旨在构建全基因组范围的常见遗传变异数据库,为复杂性疾病、人类进化和其它遗传学研究提供基础数据.此研究基于HapMap计划第Ⅰ期数据,通过群体基因组学策略对亚、欧、非人群中的正选择信号进行扫描.在基因组范围建立了一个包含多层次信息(基因、窗口、大型区域)的正选择图谱.研究表明:人类基因组中存在一定程度的正选择,正选择的"候选窗口"占总筛查窗口的~5%;基因组中的正选择信号集中于某些特定的染色体区域;确定了62个可能受到强正选择的大型区域,以及区域内相应的88个受到强正选择的"候选基因".研究还发现人群特异的选择在人群的分化过程中发挥了重要的作用.此研究将为后续的人类进化和自然选择研究提供新的线索.

  15. Laser Scanning in Forests

    Directory of Open Access Journals (Sweden)

    Håkan Olsson

    2012-09-01

    Full Text Available The introduction of Airborne Laser Scanning (ALS to forests has been revolutionary during the last decade. This development was facilitated by combining earlier ranging lidar discoveries [1–5], with experience obtained from full-waveform ranging radar [6,7] to new airborne laser scanning systems which had components such as a GNSS receiver (Global Navigation Satellite System, IMU (Inertial Measurement Unit and a scanning mechanism. Since the first commercial ALS in 1994, new ALS-based forest inventory approaches have been reported feasible for operational activities [8–12]. ALS is currently operationally applied for stand level forest inventories, for example, in Nordic countries. In Finland alone, the adoption of ALS for forest data collection has led to an annual savings of around 20 M€/year, and the work is mainly done by companies instead of governmental organizations. In spite of the long implementation times and there being a limited tradition of making changes in the forest sector, laser scanning was commercially and operationally applied after about only one decade of research. When analyzing high-ranked journal papers from ISI Web of Science, the topic of laser scanning of forests has been the driving force for the whole laser scanning research society over the last decade. Thus, the topic “laser scanning in forests” has provided a significant industrial, societal and scientific impact. [...

  16. Resonant scanning mechanism

    Science.gov (United States)

    Wallace, John; Newman, Mike; Gutierrez, Homero; Hoffman, Charlie; Quakenbush, Tim; Waldeck, Dan; Leone, Christopher; Ostaszewski, Miro

    2014-10-01

    Ball Aerospace & Technologies Corp. developed a Resonant Scanning Mechanism (RSM) capable of combining a 250- Hz resonant scan about one axis with a two-hertz triangular scan about the orthogonal axis. The RSM enables a rapid, high-density scan over a significant field of regard (FOR) while minimizing size, weight, and power requirements. The azimuth scan axis is bearing mounted allowing for 30° of mechanical travel, while the resonant elevation axis is flexure and spring mounted with five degrees of mechanical travel. Pointing-knowledge error during quiescent static pointing at room temperature across the full range is better than 100 μrad RMS per axis. The compact design of the RSM, roughly the size of a soda can, makes it an ideal mechanism for use on low-altitude aircraft and unmanned aerial vehicles. Unique aspects of the opto-mechanical design include i) resonant springs which allow for a high-frequency scan axis with low power consumption; and ii) an independent lower-frequency scan axis allowing for a wide FOR. The pointing control system operates each axis independently and employs i) a position loop for the azimuth axis; and ii) a unique combination of parallel frequency and amplitude control loops for the elevation axis. All control and pointing algorithms are hosted on a 200-MHz microcontroller with 516 KB of RAM on a compact 3"×4" digital controller, also of Ball design.

  17. Straightforward inference of ancestry and admixture proportions through ancestry-informative insertion deletion multiplexing.

    Directory of Open Access Journals (Sweden)

    Rui Pereira

    Full Text Available Ancestry-informative markers (AIMs show high allele frequency divergence between different ancestral or geographically distant populations. These genetic markers are especially useful in inferring the likely ancestral origin of an individual or estimating the apportionment of ancestry components in admixed individuals or populations. The study of AIMs is of great interest in clinical genetics research, particularly to detect and correct for population substructure effects in case-control association studies, but also in population and forensic genetics studies. This work presents a set of 46 ancestry-informative insertion deletion polymorphisms selected to efficiently measure population admixture proportions of four different origins (African, European, East Asian and Native American. All markers are analyzed in short fragments (under 230 basepairs through a single PCR followed by capillary electrophoresis (CE allowing a very simple one tube PCR-to-CE approach. HGDP-CEPH diversity panel samples from the four groups, together with Oceanians, were genotyped to evaluate the efficiency of the assay in clustering populations from different continental origins and to establish reference databases. In addition, other populations from diverse geographic origins were tested using the HGDP-CEPH samples as reference data. The results revealed that the AIM-INDEL set developed is highly efficient at inferring the ancestry of individuals and provides good estimates of ancestry proportions at the population level. In conclusion, we have optimized the multiplexed genotyping of 46 AIM-INDELs in a simple and informative assay, enabling a more straightforward alternative to the commonly available AIM-SNP typing methods dependent on complex, multi-step protocols or implementation of large-scale genotyping technologies.

  18. Effects of birthplace and individual genetic admixture on lung volume and exercise phenotypes of Peruvian Quechua.

    Science.gov (United States)

    Brutsaert, Tom D; Parra, Esteban; Shriver, Mark; Gamboa, Alfredo; Palacios, Jose-Antonio; Rivera, Maria; Rodriguez, Ivette; León-Velarde, Fabiola

    2004-04-01

    Forced vital capacity (FVC) and maximal exercise response were measured in two populations of Peruvian males (age, 18-35 years) at 4,338 m who differed by the environment in which they were born and raised, i.e., high altitude (Cerro de Pasco, Peru, BHA, n = 39) and sea level (Lima, Peru, BSL, n = 32). BSL subjects were transported from sea level to 4,338 m, and were evaluated within 24 hr of exposure to hypobaric hypoxia. Individual admixture level (ADMIX, % Spanish ancestry) was estimated for each subject, using 22 ancestry-informative genetic markers and also by skin reflectance measurement (MEL). Birthplace accounted for the approximately 10% larger FVC (P < 0.001), approximately 15% higher maximal oxygen consumption (VO(2)max, ml.min(-1).kg(-1)) (P < 0.001), and approximately 5% higher arterial oxygen saturation during exercise (SpO(2)) (P < 0.001) of BHA subjects. ADMIX was low in both study groups, averaging 9.5 +/- 2.6% and 2.1 +/- 0.3% in BSL and BHA subjects, respectively. Mean underarm MEL was significantly higher in the BSL group (P < 0.001), despite higher ADMIX. ADMIX was not associated with any study phenotype, but study power was not sufficient to evaluate hypotheses of genetic adaptation via the ADMIX variable. MEL and FVC were positively correlated in the BHA (P = 0.035) but not BSL (P = 0.335) subjects. However, MEL and ADMIX were not correlated across the entire study sample (P = 0.282). In summary, results from this study emphasize the importance of developmental adaptation to high altitude. While the MEL-FVC correlation may reflect genetic adaptation to high altitude, study results suggest that alternate (environmental) explanations be considered.

  19. Genome-wide association and admixture analysis of glaucoma in the Women's Health Initiative.

    Science.gov (United States)

    Hoffmann, Thomas J; Tang, Hua; Thornton, Timothy A; Caan, Bette; Haan, Mary; Millen, Amy E; Thomas, Fridtjof; Risch, Neil

    2014-12-15

    We report a genome-wide association study (GWAS) and admixture analysis of glaucoma in 12 008 African-American and Hispanic women (age 50-79 years) from the Women's Health Initiative (WHI). Although GWAS of glaucoma have been conducted on several populations, this is the first to look at glaucoma in individuals of African-American and Hispanic race/ethnicity. Prevalent and incident glaucoma was determined by self-report from study questionnaires administered at baseline (1993-1998) and annually through 2005. For African Americans, there was a total of 658 prevalent cases, 1062 incident cases and 6067 individuals who never progressed to glaucoma. For our replication cohort, we used the WHI Hispanics, including 153 prevalent cases, 336 incident cases and 2685 non-cases. We found an association of African ancestry with glaucoma incidence in African Americans (hazards ratio 1.62, 95% CI 1.023-2.56, P = 0.038) and in Hispanics (hazards ratio 3.21, 95% CI 1.32-7.80, P = 0.011). Although we found that no previously identified glaucoma SNPs replicated in either the WHI African Americans or Hispanics, a risk score combining all previously reported hits was significant in African-American prevalent cases (P = 0.0046), and was in the expected direction in the incident cases, as well as in the Hispanic incident cases. Additionally, after imputing to 1000 Genomes, two less common independent SNPs were suggestive in African Americans, but had too low of an allele frequency in Hispanics to test for replication. These results suggest the possibility of a distinct genetic architecture underlying glaucoma in individuals of African ancestry.

  20. Coagulated silica - a-SiO2 admixture in cement paste

    Science.gov (United States)

    Pokorný, Jaroslav; Pavlíková, Milena; Záleská, Martina; Rovnaníková, Pavla; Pavlík, Zbyšek

    2016-07-01

    Amorphous silica (a-SiO2) in fine-grained form possesses a high pozzolanic activity which makes it a valuable component of blended binders in concrete production. The origin of a-SiO2 applied in cement-based composites is very diverse. SiO2 in amorphous form is present in various amounts in quite a few supplementary cementing materials (SCMs) being used as partial replacement of Portland cement. In this work, the applicability of a commercially produced coagulated silica powder as a partial replacement of Portland cement in cement paste mix design is investigated. Portland cement CEM I 42.5R produced according to the EU standard EN 197-1 is used as a reference binder. Coagulated silica is applied in dosages of 5 and 10 % by mass of cement. The water/binder ratio is kept constant in all the studied pastes. For the applied silica, specific surface area, density, loss on ignition, pozzolanic activity, chemical composition, and SiO2 amorphous phase content are determined. For the developed pastes on the basis of cement-silica blended binder, basic physical properties as bulk density, matrix density, and total open porosity are accessed. Pore size distribution is determined using MIP analysis. Initial and final setting times of fresh mixtures are measured by automatic Vicat apparatus. Effect of silica admixture on mechanical resistivity is evaluated using compressive strength, bending strength, and dynamic Young's modulus measurement. The obtained data gives evidence of a decreased workability of paste mixtures with silica, whereas the setting process is accelerated. On the other hand, reaction activity of silica with Portland cement minerals results in a slight decrease of porosity and improvement of mechanical resistivity of cement pastes containing a-SiO2.

  1. CT scan of choristoma

    Energy Technology Data Exchange (ETDEWEB)

    Moriki, A.; Morimoto, M.; Sada, Y.; Kurisaka, M.; Mori, K.

    1987-02-01

    Choristoma is a rare tumor that occurs in the pituitary gland. The case presented here is a 44-year-old male. A plain CT scan demonstrated a slight high-density mass near the posterior clinoid of the sella turcica, while a moderate and homogeneous enhancing effect and a clear borderline were shown by an enhanced CT scan. A cornal CT scan study showed that the tumor extended from the intrasellar to the suprasellar region. The diagnosis of choristoma was made by means of histology.

  2. Development and Deployment of a Compact Eye-Safe Scanning Differential absorption Lidar (DIAL) for Spatial Mapping of Carbon Dioxide for Monitoring/Verification/Accounting at Geologic Sequestration Sites

    Energy Technology Data Exchange (ETDEWEB)

    Repasky, Kevin

    2014-03-31

    A scanning differential absorption lidar (DIAL) instrument for monitoring carbon dioxide has been developed. The laser transmitter uses two tunable discrete mode laser diodes (DMLD) operating in the continuous wave (cw) mode with one locked to the online absorption wavelength and the other operating at the offline wavelength. Two in-line fiber optic switches are used to switch between online and offline operation. After the fiber optic switch, an acousto- optic modulator (AOM) is used to generate a pulse train used to injection seed an erbium doped fiber amplifier (EDFA) to produce eye-safe laser pulses with maximum pulse energies of 66 {micro}J, a pulse repetition frequency of 15 kHz, and an operating wavelength of 1.571 {micro}m. The DIAL receiver uses a 28 cm diameter Schmidt-Cassegrain telescope to collect that backscattered light, which is then monitored using a photo-multiplier tube (PMT) module operating in the photon counting mode. The DIAL instrument has been operated from a laboratory environment on the campus of Montana State University, at the Zero Emission Research Technology (ZERT) field site located in the agricultural research area on the western end of the Montana State University campus, and at the Big Sky Carbon Sequestration Partnership site located in north-central Montana. DIAL data has been collected and profiles have been validated using a co-located Licor LI-820 Gas Analyzer point sensor.

  3. In vivowide-field multispectral scanning laser ophthalmoscopy-optical coherence tomography mouse retinal imager: longitudinal imaging of ganglion cells, microglia, and Müller glia, and mapping of the mouse retinal and choroidal vasculature

    Science.gov (United States)

    Zhang, Pengfei; Zam, Azhar; Jian, Yifan; Wang, Xinlei; Li, Yuanpei; Lam, Kit S.; Burns, Marie E.; Sarunic, Marinko V.; Pugh, Edward N., Jr.; Zawadzki, Robert J.

    2015-12-01

    Scanning laser ophthalmoscopy (SLO) and optical coherence tomography (OCT) provide complementary views of the retina, with the former collecting fluorescence data with good lateral but relatively low-axial resolution, and the latter collecting label-free backscattering data with comparable lateral but much higher axial resolution. To take maximal advantage of the information of both modalities in mouse retinal imaging, we have constructed a compact, four-channel, wide-field (˜50 deg) system that simultaneously acquires and automatically coregisters three channels of confocal SLO and Fourier domain OCT data. The scanner control system allows "zoomed" imaging of a region of interest identified in a wide-field image, providing efficient digital sampling and localization of cellular resolution features in longitudinal imaging of individual mice. The SLO is equipped with a "flip-in" spectrometer that enables spectral "fingerprinting" of fluorochromes. Segmentation of retina layers and en face display facilitate spatial comparison of OCT data with SLO fluorescence patterns. We demonstrate that the system can be used to image an individual retinal ganglion cell over many months, to simultaneously image microglia and Müller glia expressing different fluorochromes, to characterize the distinctive spatial distributions and clearance times of circulating fluorochromes with different molecular sizes, and to produce unequivocal images of the heretofore uncharacterized mouse choroidal vasculature.

  4. Cervical spine CT scan

    Science.gov (United States)

    ... defects of the cervical spine Bone problems Fracture Osteoarthritis Disc herniation Risks Risks of CT scans include: ... Ma, MD, Assistant Professor, Chief, Sports Medicine and Shoulder Service, UCSF Department of Orthopaedic Surgery, San Francisco, ...

  5. Scanning Auger Electron Microscope

    Data.gov (United States)

    Federal Laboratory Consortium — A JEOL model 7830F field emission source, scanning Auger microscope. Specifications / Capabilities: Ultra-high vacuum (UHV), electron gun range from 0.1 kV to 25 kV,...

  6. Scanning Auger Electron Microscope

    Data.gov (United States)

    Federal Laboratory Consortium — A JEOL model 7830F field emission source, scanning Auger microscope.Specifications / Capabilities:Ultra-high vacuum (UHV), electron gun range from 0.1 kV to 25 kV,...

  7. Shoulder MRI scan

    Science.gov (United States)

    ... finding on an x-ray or bone scan Shoulder pain and fever Decreased motion of the shoulder joint ... of the shoulder joint Shoulder instability Shoulder weakness Shoulder pain and a history of cancer Shoulder pain that ...

  8. Slow Scan Telemedicine

    Science.gov (United States)

    1984-01-01

    Originally developed under contract for NASA by Ball Bros. Research Corporation for acquiring visual information from lunar and planetary spacecraft, system uses standard closed circuit camera connected to a device called a scan converter, which slows the stream of images to match an audio circuit, such as a telephone line. Transmitted to its destination, the image is reconverted by another scan converter and displayed on a monitor. In addition to assist scans, technique allows transmission of x-rays, nuclear scans, ultrasonic imagery, thermograms, electrocardiograms or live views of patient. Also allows conferencing and consultation among medical centers, general practitioners, specialists and disease control centers. Commercialized by Colorado Video, Inc., major employment is in business and industry for teleconferencing, cable TV news, transmission of scientific/engineering data, security, information retrieval, insurance claim adjustment, instructional programs, and remote viewing of advertising layouts, real estate, construction sites or products.

  9. Thyroid Scan and Uptake

    Medline Plus

    Full Text Available ... as an overactive thyroid gland, a condition called hyperthyroidism , cancer or other growths assess the nature of ... an x-ray or CT scan, surgeries or treatments using iodinated contrast material within the last two ...

  10. Photothermal imaging scanning microscopy

    Science.gov (United States)

    Chinn, Diane; Stolz, Christopher J.; Wu, Zhouling; Huber, Robert; Weinzapfel, Carolyn

    2006-07-11

    Photothermal Imaging Scanning Microscopy produces a rapid, thermal-based, non-destructive characterization apparatus. Also, a photothermal characterization method of surface and subsurface features includes micron and nanoscale spatial resolution of meter-sized optical materials.

  11. The conical scan radiometer

    Science.gov (United States)

    Prosch, T.; Hennings, D.

    1982-07-01

    A satellite-borne conical scan radiometer (CSR) is proposed, offering multiangular and multispectral measurements of Earth radiation fields, including the total radiances, which are not available from conventional radiometers. Advantages of the CSR for meteorological studies are discussed. In comparison to conventional cross track scanning instruments, the CSR is unique with respect to the selected picture element size which is kept constant by means of a specially shaped detector matrix at all scan angles. The conical scan mode offers the chance to improve angular sampling. Angular sampling gaps of previous satellite-borne radiometers can be interpolated and complemented by CSR data. Radiances are measured through 10 radiometric channels which are selected to study cloudiness, water vapor, ozone, surface albedo, ground and mean stratospheric temperature, and aerosols.

  12. Thyroid Scan and Uptake

    Medline Plus

    Full Text Available ... Uptake? A thyroid scan is a type of nuclear medicine imaging. The radioactive iodine uptake test (RAIU) ... of thyroid function, but does not involve imaging. Nuclear medicine is a branch of medical imaging that ...

  13. Thyroid Scan and Uptake

    Medline Plus

    Full Text Available ... which are encased in metal and plastic and most often shaped like a box, attached to a ... will I experience during and after the procedure? Most thyroid scan and thyroid uptake procedures are painless. ...

  14. Thyroid Scan and Uptake

    Medline Plus

    Full Text Available ... of page What are some common uses of the procedure? The thyroid scan is used to determine ... you are undergoing. top of page What does the equipment look like? Special camera or imaging devices ...

  15. Scanning laser Doppler vibrometry

    OpenAIRE

    2016-01-01

    With a Scanning Laser Doppler Vibrometer (SLDV) a vibrating surface is automatically scanned over predefined grid points, and data processed for displaying vibration properties like mode shapes, natural frequencies, damping ratios, and operational deflection shapes. Our SLDV – a PSV-500H from Polytec Inc. – was acquired and put to operation in October 2014, paid by a sub-donation of DKK 1,5 mill. of the total VILLUM CASMaT grant. Opening possibilities of measuring complicated vibration shapes...

  16. Genetic Mapping

    Science.gov (United States)

    ... Fact Sheets Fact Sheets En Español: Mapeo Genético Genetic Mapping What is genetic mapping? How do researchers create ... genetic map? What are genetic markers? What is genetic mapping? Among the main goals of the Human Genome ...

  17. Graphene Conductance Uniformity Mapping

    DEFF Research Database (Denmark)

    Buron, Jonas Christian Due; Petersen, Dirch Hjorth; Bøggild, Peter

    2012-01-01

    We demonstrate a combination of micro four-point probe (M4PP) and non-contact terahertz time-domain spectroscopy (THz-TDS) measurements for centimeter scale quantitative mapping of the sheet conductance of large area chemical vapor deposited graphene films. Dual configuration M4PP measurements......, demonstrated on graphene for the first time, provide valuable statistical insight into the influence of microscale defects on the conductance, while THz-TDS has potential as a fast, non-contact metrology method for mapping of the spatially averaged nanoscopic conductance on wafer-scale graphene with scan times......, dominating the microscale conductance of the investigated graphene film....

  18. Photoelectric scanner makes detailed work function maps of metal surface

    Science.gov (United States)

    Rasor, N. S.

    1966-01-01

    Photoelectric scanning device maps the work function of a metal surface by scanning it with a light spot and measuring the resulting photocurrent. The device is capable of use over a range of surface temperatures.

  19. Concept Maps

    OpenAIRE

    Schwendimann, Beat Adrian

    2014-01-01

    A concept map is a node-link diagram showing the semantic relationships among concepts. The technique for constructing concept maps is called "concept mapping". A concept map consists of nodes, arrows as linking lines, and linking phrases that describe the relationship between nodes. Two nodes connected with a labeled arrow are called a proposition. Concept maps are versatile graphic organizers that can represent many different forms of relationships between concepts. The relationship between...

  20. Optimization of compressive strength in admixture-reinforced cement-based grouts

    Directory of Open Access Journals (Sweden)

    Sahin Zaimoglu, A.

    2007-12-01

    Full Text Available The Taguchi method was used in this study to optimize the unconfined (7-, 14- and 28-day compressive strength of cement-based grouts with bentonite, fly ash and silica fume admixtures. The experiments were designed using an L16 orthogonal array in which the three factors considered were bentonite (0%, 0.5%, 1.0% and 3%, fly ash (10%, 20%, 30% and 40% and silica fume (0%, 5%, 10% and 20% content. The experimental results, which were analyzed by ANOVA and the Taguchi method, showed that fly ash and silica fume content play a significant role in unconfined compressive strength. The optimum conditions were found to be: 0% bentonite, 10% fly ash, 20% silica fume and 28 days of curing time. The maximum unconfined compressive strength reached under the above optimum conditions was 17.1 MPa.En el presente trabajo se ha intentado optimizar, mediante el método de Taguchi, las resistencias a compresión (a las edades de 7, 14 y 28 días de lechadas de cemento reforzadas con bentonita, cenizas volantes y humo de sílice. Se diseñaron los experimentos de acuerdo con un arreglo ortogonal tipo L16 en el que se contemplaban tres factores: la bentonita (0, 0,5, 1 y 3%, las cenizas volantes (10, 20, 30 y 40% y el humo de sílice (0, 5, 10 y 20% (porcentajes en peso del sólido. Los datos obtenidos se analizaron con mediante ANOVA y el método de Taguchi. De acuerdo con los resultados experimentales, el contenido tanto de cenizas volantes como de humo de sílice desempeña un papel significativo en la resistencia a compresión. Por otra parte, las condiciones óptimas que se han identificado son: 0% bentonita, 10% cenizas volantes, 20% humo de sílice y 28 días de tiempo de curado. La resistencia a compresión máxima conseguida en las anteriores condiciones era de 17,1 MPa.

  1. Femtosecond scanning tunneling microscope

    Energy Technology Data Exchange (ETDEWEB)

    Taylor, A.J.; Donati, G.P.; Rodriguez, G.; Gosnell, T.R.; Trugman, S.A.; Some, D.I.

    1998-11-01

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at the Los Alamos National Laboratory (LANL). By combining scanning tunneling microscopy with ultrafast optical techniques we have developed a novel tool to probe phenomena on atomic time and length scales. We have built and characterized an ultrafast scanning tunneling microscope in terms of temporal resolution, sensitivity and dynamic range. Using a novel photoconductive low-temperature-grown GaAs tip, we have achieved a temporal resolution of 1.5 picoseconds and a spatial resolution of 10 nanometers. This scanning tunneling microscope has both cryogenic and ultra-high vacuum capabilities, enabling the study of a wide range of important scientific problems.

  2. Current situation and reflection of domestic intravenous pharmacy admixture models%国内静脉药物调配模式现状与思考

    Institute of Scientific and Technical Information of China (English)

    夏英华; 毛燕君; 朱建英

    2012-01-01

    This article summarized the current situation of three intravenous pharmacy admixture models,including ward intravenous drag distribution model, Pharmacy Intravenous Admixture Services (PIVAS) and decentralized distribution model. It analyzed the advantages and disadvantages,and on the basis,reflection and suggestions of pharmacy admixture methods were put forward.%文章分别归纳了国内病区药物自配模式、静脉药物集中调配模式和分散药物调配模式的发展现状及其优缺点,在此基础上,对国内静脉药物调配模式的发展进行思考并提出建议.

  3. Adaptive Optical Scanning Holography

    Science.gov (United States)

    Tsang, P. W. M.; Poon, Ting-Chung; Liu, J.-P.

    2016-01-01

    Optical Scanning Holography (OSH) is a powerful technique that employs a single-pixel sensor and a row-by-row scanning mechanism to capture the hologram of a wide-view, three-dimensional object. However, the time required to acquire a hologram with OSH is rather lengthy. In this paper, we propose an enhanced framework, which is referred to as Adaptive OSH (AOSH), to shorten the holographic recording process. We have demonstrated that the AOSH method is capable of decreasing the acquisition time by up to an order of magnitude, while preserving the content of the hologram favorably. PMID:26916866

  4. Range expansion of house sparrows (Passer domesticus) in Kenya: evidence of genetic admixture and human-mediated dispersal.

    Science.gov (United States)

    Schrey, Aaron W; Liebl, Andrea L; Richards, Christina L; Martin, Lynn B

    2014-01-01

    Introduced species offer an opportunity to study the ecological process of range expansions. Recently, 3 mechanisms have been identified that may resolve the genetic paradox (the seemingly unlikely success of introduced species given the expected reduction in genetic diversity through bottlenecks or founder effects): multiple introductions, high propagule pressure, and epigenetics. These mechanisms are probably also important in range expansions (either natural or anthropogenic), yet this possibility remains untested in vertebrates. We used microsatellite variation (7 loci) in house sparrows (Passer domesticus), an introduced species that has been spreading across Kenya for ~60 years, to determine if patterns of variation could explain how this human commensal overcame the genetic paradox and expresses such considerable phenotypic differentiation across this new range. We note that in some cases, polygenic traits and epistasis among genes, for example, may not have negative effects on populations. House sparrows arrived in Kenya by a single introduction event (to Mombasa, ~1950) and have lower genetic diversity than native European and introduced North American populations. We used Bayesian clustering of individuals (n = 233) to detect that at least 2 types of range expansion occurred in Kenya: one with genetic admixture and one with little to no admixture. We also found that genetic diversity increased toward a range edge, and the range expansion was consistent with long-distance dispersal. Based on these data, we expect that the Kenyan range expansion was anthropogenically influenced, as the expansions of other introduced human commensals may also be.

  5. Gene admixture in ethnic populations in upper part of Silk Road revealed by mtDNA polymorphism

    Institute of Scientific and Technical Information of China (English)

    YANG LiuQi; TAN SiJie; YU HaiJing; ZHENG BingRong; QIAO EnFa; DONG YongLi; ZAN RuiGuang; XIAO ChunJie

    2008-01-01

    To evaluate the gene admixture on the current genetic landscape in Gansu Corridor (GC) in China, the upper part of the ancient Silk Road which connects the Eastern and Central Asia, we examined mitochondrial DNA (mtDNA) polymorphisms of five ethnic populations in this study. Using PCR-RFLP and sequencing, we analyzed mtDNA haplotypes in 242 unrelated samples in three ethnic populations from the GC region and two ethnic populations from the adjacent Xinjiang Uygur Autonomous Region of China. We analyzed the data in comparison with the previously reported data from Eastern, Central and Western Asia and Europe. We found that both European-specific haplogroups and Eastern Asian-specific haplogroups exist in the Gansu Corridor populations, while a modest matrilineal gene flow from Europeans to this region was revealed. The Gansu Corridor populations are genetically located between Eastern Asians and Central Asians, both of who contributed significantly to the maternal lineages of the GC populations. This study made the landscape of the gene flow and admixture along the Silk Road from Europe, through Central Asia, to the upper part of the Silk Road more complete.

  6. Admixture in Latin America: Geographic Structure, Phenotypic Diversity and Self-Perception of Ancestry Based on 7,342 Individuals

    Science.gov (United States)

    Ruiz-Linares, Andrés; Adhikari, Kaustubh; Acuña-Alonzo, Victor; Quinto-Sanchez, Mirsha; Jaramillo, Claudia; Arias, William; Fuentes, Macarena; Pizarro, María; Everardo, Paola; de Avila, Francisco; Gómez-Valdés, Jorge; León-Mimila, Paola; Hunemeier, Tábita; Ramallo, Virginia; Silva de Cerqueira, Caio C.; Burley, Mari-Wyn; Konca, Esra; de Oliveira, Marcelo Zagonel; Veronez, Mauricio Roberto; Rubio-Codina, Marta; Attanasio, Orazio; Gibbon, Sahra; Ray, Nicolas; Gallo, Carla; Poletti, Giovanni; Rosique, Javier; Schuler-Faccini, Lavinia; Salzano, Francisco M.; Bortolini, Maria-Cátira; Canizales-Quinteros, Samuel; Rothhammer, Francisco; Bedoya, Gabriel; Balding, David; Gonzalez-José, Rolando

    2014-01-01

    The current genetic makeup of Latin America has been shaped by a history of extensive admixture between Africans, Europeans and Native Americans, a process taking place within the context of extensive geographic and social stratification. We estimated individual ancestry proportions in a sample of 7,342 subjects ascertained in five countries (Brazil, Chile, Colombia, México and Perú). These individuals were also characterized for a range of physical appearance traits and for self-perception of ancestry. The geographic distribution of admixture proportions in this sample reveals extensive population structure, illustrating the continuing impact of demographic history on the genetic diversity of Latin America. Significant ancestry effects were detected for most phenotypes studied. However, ancestry generally explains only a modest proportion of total phenotypic variation. Genetically estimated and self-perceived ancestry correlate significantly, but certain physical attributes have a strong impact on self-perception and bias self-perception of ancestry relative to genetically estimated ancestry. PMID:25254375

  7. Theoretical and experimental study of inertial gases admixtures influence on the hard x-ray emission of plasma focus

    Science.gov (United States)

    Dulatov, A. K.; Lemeshko, B. D.; Mikhailov, Yu V.; Prokuratov, I. A.; Selifanov, A. N.

    2015-11-01

    This paper studies the influence of inertial gases admixtures (Ar, Kr, Xe) to deuterium in plasma focus (PF) chambers. Experiments were realized in PF chambers with discharge currents of 350, 650 and 1000 kA. The measurements of the hard x-ray (HXR) emission were carried out by the scintillation detector SSDI38 with time resolution of 2.5 ns. Experiments show the existence of optimum amount of inertial gases, which corresponds with the atomic number of added gas. At the optimum amount of inertial gas and deuterium in PF chamber, the HXR yield rises up to 10 times in comparison with HXR yield only for deuterium filling. This work shows the dependence of HXR emission on PF device stored energy. The mechanism of inertial gases admixtures influence that leads to rise of HXR yield has been discussed. The mechanism concerns with different behavior of deuterium ions and ions of inertial gases during the pinch decay phase when the discharge current compression force has reduced. Inertial gas ions locate near the axis of the pinch and deuterium ions go to the near plasma area. Local positive charge in plasma forms on this axis because of multiply charged ions of inertial gases. Then electrons gather to the axis area and electron density increases. This electrons form high current electron beam under the influence of the induced electromotive force during the pinch decay phase. HXR emission is generated after the electron beam interaction with the anode target in PF chamber.

  8. Applications. SCANS Plans Portfolio.

    Science.gov (United States)

    Sample, Barbara

    This guide assists English-as-a-Second-Language educators in helping students fill out simple application forms. The guide discusses performance outcomes, communications teaching points, SCANS (Secretary's Committee on Achieving Necessary Skills) competencies, classroom configurations, materials, and procedures. Blank forms, suitable for…

  9. Sinus MRI scan

    Science.gov (United States)

    ... A CT scan may be preferred in emergency cases, since it is faster and often available in the emergency room. Note: MRI is not as effective as CT in defining the anatomy of the sinuses, and therefore is not typically used for suspected acute sinusitis.

  10. Scanning bubble chamber pictures

    CERN Multimedia

    1974-01-01

    These were taken at the 2 m hydrogen bubble chamber. The photo shows an early Shiva system where the pre-measurements needed to qualify the event were done manually (cf photo 7408136X). The scanning tables were located in bld. 12. Gilberte Saulmier sits on foreground, Inge Arents at centre.

  11. SCANNING-DLTS

    OpenAIRE

    Breitenstein, O.

    1989-01-01

    Scanning Deep Level Transient Spectroscopy (SDLTS) is a current SEM technique for the detection of the local distribution of deep level centres in semiconductors. The contribution deals with the physical foundations of the SDLTS technique and it discusses the demands on the instrumentation. The measurement practice is described and illustrated by several experimental examples. Finally, the possibilities and limitations of SDLTS are critically reviewed.

  12. Map Projection

    CERN Document Server

    Ghaderpour, Ebrahim

    2014-01-01

    In this paper, we introduce some known map projections from a model of the Earth to a flat sheet of paper or map and derive the plotting equations for these projections. The first fundamental form and the Gaussian fundamental quantities are defined and applied to obtain the plotting equations and distortions in length, shape and size for some of these map projections.

  13. Topographic mapping

    Science.gov (United States)

    ,

    2008-01-01

    The U.S. Geological Survey (USGS) produced its first topographic map in 1879, the same year it was established. Today, more than 100 years and millions of map copies later, topographic mapping is still a central activity for the USGS. The topographic map remains an indispensable tool for government, science, industry, and leisure. Much has changed since early topographers traveled the unsettled West and carefully plotted the first USGS maps by hand. Advances in survey techniques, instrumentation, and design and printing technologies, as well as the use of aerial photography and satellite data, have dramatically improved mapping coverage, accuracy, and efficiency. Yet cartography, the art and science of mapping, may never before have undergone change more profound than today.

  14. Study on witherite as admixture of cement%毒重石作水泥混合材的研究

    Institute of Scientific and Technical Information of China (English)

    刘煦; 吕淑珍; 霍冀川

    2012-01-01

    结合毒重石质量优、易加工、生产成本低及吸收X射线、γ射线等特点,制备了以普通硅酸盐水泥熟料为主要原料,毒重石作水泥混合材,辅以适量石膏的水硬性胶凝材料.考察了毒重石掺量对水泥标准稠度用水量、凝结时间、安定性、不同龄期机械强度以及辐射屏蔽能力的影响.结果表明:毒重石对普通硅酸盐水泥熟料具有一定的缓凝作用;毒重石本身参与水化的能力很差,在水泥中基本上是作为非活性掺和材料,主要起填料的作用;毒重石水泥具有一定的辐射屏蔽能力,且随着毒重石掺量的增加,水泥的屏蔽效果增强.%Combining witherite's characteristics,such as high quality,easy-processing,low production cost,absorbing X ray and y ray etc.,hydraulic cementing material was prepared by using ordinary portland cement clinker as main material, witherite as admixture,and proper amount of gypsum as excipients.Influences of different witherite doping contents on water requirement of normal consistency, setting time, soundness, mechanical strength, and radiation shield performance of the cement were investigated.Results showed that witherite had some retarding effect on the Portland cement clinker.However.the ability of witherite to participate in hydration of cement clinker was so poor that it was basically being an inactive admixture and played a role of filler in cement.Cement based materials with witherite as admixture had certain radiation shield ability, and the radiation shielding effect was more apparent as the content of witherite increased.

  15. Forensic Scanning Electron Microscope

    Science.gov (United States)

    Keeley, R. H.

    1983-03-01

    The scanning electron microscope equipped with an x-ray spectrometer is a versatile instrument which has many uses in the investigation of crime and preparation of scientific evidence for the courts. Major applications include microscopy and analysis of very small fragments of paint, glass and other materials which may link an individual with a scene of crime, identification of firearms residues and examination of questioned documents. Although simultaneous observation and chemical analysis of the sample is the most important feature of the instrument, other modes of operation such as cathodoluminescence spectrometry, backscattered electron imaging and direct x-ray excitation are also exploited. Marks on two bullets or cartridge cases can be compared directly by sequential scanning with a single beam or electronic linkage of two instruments. Particles of primer residue deposited on the skin and clothing when a gun is fired can be collected on adhesive tape and identified by their morphology and elemental composition. It is also possible to differentiate between the primer residues of different types of ammunition. Bullets may be identified from the small fragments left behind as they pass through the body tissues. In the examination of questioned documents the scanning electron microscope is used to establish the order in which two intersecting ink lines were written and to detect traces of chemical markers added to the security inks on official documents.

  16. Scanning ultrafast electron microscopy.

    Science.gov (United States)

    Yang, Ding-Shyue; Mohammed, Omar F; Zewail, Ahmed H

    2010-08-24

    Progress has been made in the development of four-dimensional ultrafast electron microscopy, which enables space-time imaging of structural dynamics in the condensed phase. In ultrafast electron microscopy, the electrons are accelerated, typically to 200 keV, and the microscope operates in the transmission mode. Here, we report the development of scanning ultrafast electron microscopy using a field-emission-source configuration. Scanning of pulses is made in the single-electron mode, for which the pulse contains at most one or a few electrons, thus achieving imaging without the space-charge effect between electrons, and still in ten(s) of seconds. For imaging, the secondary electrons from surface structures are detected, as demonstrated here for material surfaces and biological specimens. By recording backscattered electrons, diffraction patterns from single crystals were also obtained. Scanning pulsed-electron microscopy with the acquired spatiotemporal resolutions, and its efficient heat-dissipation feature, is now poised to provide in situ 4D imaging and with environmental capability.

  17. Numerical and experimental study on the dynamics of a μs helium plasma gun with various amounts of O2 admixture

    Science.gov (United States)

    Viegas, Pedro; Damany, Xavier; Iseni, Sylvain; Pouvesle, Jean-Michel; Robert, Eric; Bourdon, Anne

    2016-09-01

    The use of admixtures (mostly O2 and N2) to a helium buffer has been studied recently to tailor the generation of reactive species in plasma jets for biomedical applications. So far, most experiments have been dedicated to the study of the plasma plume. For endoscopic treatments, it is also important to better understand and optimize the propagation of discharges in long dielectric tubes as catheters. In this work, we present an experimental and numerical study on the dynamics of a μs helium plasma discharge with O2 admixture in a long dielectric tube. In simulations, a 2D fluid model is used. For comparison purposes, the geometries of the set-ups used for simulations and experiments are as close as possible. We compare experiments and simulations for different amounts of O2 admixture added to the buffer gas and present results on the velocity of the discharge front for the various amounts of O2 and different applied voltages. In order to study the influence of different amounts of O2 admixture on the helium discharge dynamics, detailed kinetic schemes have been used. The influence of Penning and charge exchange reactions on the discharge structure and dynamics are studied, as well as the role of negative ions. P.V. is supported by an EDOM fellowship, and X.D. by an INEL/Region Centre-Val de Loire fellowship.

  18. Alkali-silica reactions of mortars produced by using waste glass as fine aggregate and admixtures such as fly ash and Li2CO3.

    Science.gov (United States)

    Topçu, Ilker Bekir; Boğa, Ahmet Raif; Bilir, Turhan

    2008-01-01

    Use of waste glass or glass cullet (GC) as concrete aggregate is becoming more widespread each day because of the increase in resource efficiency. Recycling of wastes is very important for sustainable development. When glass is used as aggregate in concrete or mortar, expansions and internal stresses occur due to an alkali-silica reaction (ASR). Furthermore, rapid loss in durability is generally observed due to extreme crack formation and an increase in permeability. It is necessary to use some kind of chemical or mineral admixture to reduce crack formation. In this study, mortar bars are produced by using three different colors of glass in four different quantities as fine aggregate by weight, and the effects of these glass aggregates on ASR are investigated, corresponding to ASTM C 1260. Additionally, in order to reduce the expansions of mortars, 10% and 20% fly ash (FA) as mineral admixture and 1% and 2% Li(2)CO(3) as chemical admixture are incorporated by weight in the cement and their effects on expansion are examined. It is observed that among white (WG), green (GG) and brown glass (BG) aggregates, WG aggregate causes the greatest expansion. In addition, expansion increases with an increase in amount of glass. According to the test results, it is seen that over 20% FA and 2% Li(2)CO(3) replacements are required to produce mortars which have expansion values below the 0.2% critical value when exposed to ASR. However, usages of these admixtures reduce expansions occurring because of ASR.

  19. Scanning measurement of Seebeck coefficient of a heated sample

    Energy Technology Data Exchange (ETDEWEB)

    Snyder, G. Jeffrey; Iwanaga, Shiho

    2016-04-19

    A novel scanning Seebeck coefficient measurement technique is disclosed utilizing a cold scanning thermocouple probe tip on heated bulk and thin film samples. The system measures variations in the Seebeck coefficient within the samples. The apparatus may be used for two dimensional mapping of the Seebeck coefficient on the bulk and thin film samples. This technique can be utilized for detection of defective regions, as well as phase separations in the sub-mm range of various thermoelectric materials.

  20. MIREX: MapReduce Information Retrieval Experiments

    NARCIS (Netherlands)

    Hiemstra, Djoerd; Hauff, Claudia

    2010-01-01

    We propose to use MapReduce to quickly test new retrieval approaches on a cluster of machines by sequentially scanning all documents. We present a small case study in which we use a cluster of 15 low cost machines to search a web crawl of 0.5 billion pages showing that sequential scanning is a viabl

  1. Survey and coping strategies for job stress of new nurses in pharmacy intravenous admixture service: a pilot study.

    Science.gov (United States)

    Wang, Feng-Shuang; Jin, Ou; Feng, Hua; Wang, Feng-Hua; Ren, Chun-Hui

    2015-01-01

    To survey the nurse stress and analyze stressors in new nurses from pharmacy intravenous admixture service (PIAS). A questionnaire survey referring to the revised stressor scale was carried out on 52 new nurses of PIAS in four hospitals in Harbin. The average stress score for all participants was 2.43±0.63, as medium level of stress. The stressors were classified into 6 categories: ensuring up-to-date knowledge of professional nursing skills, increased workload and work-time, interpersonal relationship, ensuring knowledge of equipments, attending educational programs, and decreased occupational demand. The most important stressors included fear of medical accident occurrence, fear of failure in performance assessment, fear of occupational injuries, feeling fatigue and lack of sleep. Considering the various kinds of stressors in the working places, it was necessary for managers' to use appropriate strategies to cope with the job stress in new nurses of PIAS.

  2. Social class, admixture, and skin color variation in Mexican-Americans and Anglo-Americans living in San Antonio, Texas.

    Science.gov (United States)

    Relethford, J H; Stern, M P; Gaskill, S P; Hazuda, H P

    1983-05-01

    Social class may act in different ways as a barrier to gene flow in urban populations, depending on ethnicity. We test the hypothesis that biological variation is affected by social class subdivision using skin reflectance data collected for 393 Anglo-American and 930 Mexican-American adults in the major urban population of San Antonio, Texas. Two socioeconomic groups were sampled for the Anglo-American population: a middle-income transitional group and a high-income suburban group. In addition, we sampled a third socioeconomic group for Mexican-Americans: a low income barrio. Sex and age effects on skin color are minimal. Social class has no effect on skin color variation for Anglo-Americans, whereas there is a highly significant effect on social class subdivision for Mexican-Americans. Admixture estimates were derived from skin reflectance data and show that the proportion of native American ancestry decreases as social class increases.

  3. Multiple Origins and Admixture of Recently Expanding Japanese Wild Boar (Sus scrofa leucomystax) Populations in Toyama Prefecture of Japan.

    Science.gov (United States)

    Yamazaki, Yuji; Adachi, Fuminari; Sawamura, Akira

    2016-02-01

    Japanese wild boar (Sus scrofa leucomystax) populations have expanded drastically throughout the Japanese Archipelago in recent decades. To elucidate the dispersal patterns of Japanese wild boar in Toyama Prefecture in central Japan, we used a multi-locus microsatellite DNA analysis to determine its population structure and the degree of admixture. The deviation from Hardy-Weinberg equilibrium was detected in either total or separate regional wild boar samples from Toyama Prefecture. This result could be explained by the Wahlund effect resulting from the mixture of samples from different sources. Bayesian structure analysis, assignment test, and factorial correspondence analysis suggested that wild boars around Toyama Prefecture derive from at least two ancestral sources. The migration and possible mating of each individual may have occurred recently and continued in each geographically neighboring region. The present genetic results may be useful for prediction of future dispersal patterns of Japanese wild boar, as well as other animals in expansion.

  4. Effect of coagulants on the quality of chhana and rasogolla obtained from admixture of buffalo milk and butter milk.

    Science.gov (United States)

    Kumar, Jitendra; Gupta, V K; Kumar, Sanjeev; Kumar, Suryamani

    2015-03-01

    A study was carried out to investigate the effect of different coagulant (lactic acid, citric acid and calcium lactate) on yield, sensory and textural characteristics of chhana and rasogolla made from admixture of buffalo milk and sweet cream butter milk (SCBM). The highest yield of chhana was observed with calcium lactate whereas the minimum yield was found with citric acid. There was no significant difference found with respect to flavour and colour and appearances scores, however, significant (p < 0.01) difference found in body and texture of chhana samples prepared with different coagulant. In addition to that, significant (p < 0.05) difference observed with respect to body and texture, flavour and porosity of rasogolla, but no significant difference was observed in colour and appearance as well as sweetness of rasogolla prepared with chhana obtained from varying coagulants. Among different coagulants, citric acid was found best suitable for chhana as well as rasogolla making.

  5. Multispecies Outcomes of Sympatric Speciation after Admixture with the Source Population in Two Radiations of Nicaraguan Crater Lake Cichlids.

    Science.gov (United States)

    Kautt, Andreas F; Machado-Schiaffino, Gonzalo; Meyer, Axel

    2016-06-01

    The formation of species in the absence of geographic barriers (i.e. sympatric speciation) remains one of the most controversial topics in evolutionary biology. While theoretical models have shown that this most extreme case of primary divergence-with-gene-flow is possible, only a handful of accepted empirical examples exist. And even for the most convincing examples uncertainties remain; complex histories of isolation and secondary contact can make species falsely appear to have originated by sympatric speciation. This alternative scenario is notoriously difficult to rule out. Midas cichlids inhabiting small and remote crater lakes in Nicaragua are traditionally considered to be one of the best examples of sympatric speciation and lend themselves to test the different evolutionary scenarios that could lead to apparent sympatric speciation since the system is relatively small and the source populations known. Here we reconstruct the evolutionary history of two small-scale radiations of Midas cichlids inhabiting crater lakes Apoyo and Xiloá through a comprehensive genomic data set. We find no signs of differential admixture of any of the sympatric species in the respective radiations. Together with coalescent simulations of different demographic models our results support a scenario of speciation that was initiated in sympatry and does not result from secondary contact of already partly diverged populations. Furthermore, several species seem to have diverged simultaneously, making Midas cichlids an empirical example of multispecies outcomes of sympatric speciation. Importantly, however, the demographic models strongly support an admixture event from the source population into both crater lakes shortly before the onset of the radiations within the lakes. This opens the possibility that the formation of reproductive barriers involved in sympatric speciation was facilitated by genetic variants that evolved in a period of isolation between the initial founding

  6. Population structure and paternal admixture landscape on present-day Mexican-Mestizos revealed by Y-STR haplotypes.

    Science.gov (United States)

    Salazar-Flores, J; Dondiego-Aldape, R; Rubi-Castellanos, R; Anaya-Palafox, M; Nuño-Arana, I; Canseco-Avila, L M; Flores-Flores, G; Morales-Vallejo, M E; Barojas-Pérez, N; Muñoz-Valle, J F; Campos-Gutiérrez, R; Rangel-Villalobos, H

    2010-01-01

    Mestizos currently represent most of the Mexican population (>90%); they are defined as individuals born in the country having a Spanish-derived last name, with family antecedents of Mexican ancestors back at least to the third generation. Mestizos are result of 500 years of admixture mainly among Spaniards, Amerindians, and African slaves. Consequently, a complex genetic pattern has been generated throughout the country that has been scarcely studied from the paternal point of view. This fact is important, taking into account that gene flow toward the New World comprised largely males. We analyzed the population structure and paternal admixture of present-day Mexican-Mestizo populations based on Y-STRs. We genotyped at least 12 Y-STRs in DNA samples of 986 males from five states: Aguascalientes (n = 293); Jalisco (n = 185); Guanajuato (n = 168); Chiapas (n = 170); and Yucatán (n = 170). AmpFlSTR Y-filer and Powerplex-Y(R) kits were used. Inclusion of North and Central Y-STR databases in the analyses allowed obtaining a Y-STR variability landscape from Mexico. Results confirmed the population differentiation gradient previously noted in Mestizos with SNPs and autosomal STRs throughout the Mexican territory: European ancestry increments to the Northwest and, correspondingly, Amerindian ancestry increments to the Center and Southeast. In addition, SAMOVA test and Autocorrelation Index for DNA Analysis autocorrelogram plot suggested preferential gene flow of males with neighboring populations in agreement with the isolation-by-distance model. Results are important for disease-risk studies (principally male-related) and for human identification purposes, because Y-STR databases are not available on the majority of Mexican-Mestizo populations.

  7. Surface micromachined scanning mirrors

    DEFF Research Database (Denmark)

    Mattsson, Kent Erik

    1992-01-01

    Both aluminum cantilever and torsional scanning mirrors have been fabricated and their static and dynamic properties are studied experimentally and theoretically. The experiments showed resonance frequencies in the range of 163 k-Hz - 632 kHz for cantilever beams with Q values between 5 and 11....... Torsional mirrors showed resonance frequencies in the range of 410 kHz - 667 kHz with Q values of 10 - 17. All measurements performed at atmospheric pressure. Both types of mechanical structures were deflected electrostatically at large angles (± 5°) more than 1011 times without breaking and without any...

  8. Mapping Deeply

    OpenAIRE

    Denis Wood

    2015-01-01

    This is a description of an avant la lettre deep mapping project carried out by a geographer and a number of landscape architecture students in the early 1980s. Although humanists seem to take the “mapping” in deep mapping more metaphorically than cartographically, in this neighborhood mapping project, the mapmaking was taken literally, with the goal of producing an atlas of the neighborhood. In this, the neighborhood was construed as a transformer, turning the stuff of the world (gas, wate...

  9. Multiplatform Mobile Laser Scanning: Usability and Performance

    Directory of Open Access Journals (Sweden)

    Yuwei Chen

    2012-08-01

    Full Text Available Mobile laser scanning is an emerging technology capable of capturing three-dimensional data from surrounding objects. With state-of-the-art sensors, the achieved point clouds capture object details with good accuracy and precision. Many of the applications involve civil engineering in urban areas, as well as traffic and other urban planning, all of which serve to make 3D city modeling probably the fastest growing market segment in this field. This article outlines multiplatform mobile laser scanning solutions such as vehicle- and trolley-operated urban area data acquisition, and boat-mounted equipment for fluvial environments. Moreover, we introduce a novel backpack version of mobile laser scanning equipment for surveying applications in the field of natural sciences where the requirements include precision and mobility in variable terrain conditions. In addition to presenting a technical description of the systems, we discuss the performance of the solutions in the light of various applications in the fields of urban mapping and modeling, fluvial geomorphology, snow-cover characterization, precision agriculture, and in monitoring the effects of climate change on permafrost landforms. The data performance of the mobile laser scanning approach is described by the results of an evaluation of the ROAMER on a permanent MLS test field. Furthermore, an in situ accuracy assessment using a field of spherical 3D targets for the newly-introduced Akhka backpack system is conducted and reported on.

  10. Bone Densitometry (Bone Density Scan)

    Science.gov (United States)

    ... News Physician Resources Professions Site Index A-Z Bone Densitometry (DEXA) Bone densitometry, also called dual-energy ... limitations of DEXA Bone Densitometry? What is a Bone Density Scan (DEXA)? Bone density scanning, also called ...

  11. Scanned-cantilever atomic force microscope with large scanning range

    Institute of Scientific and Technical Information of China (English)

    Jintao Yang; Wendong Xu

    2006-01-01

    A scanned-cantilever atomic force microscope (AFM) with large scanning range is proposed, which adopts a new design named laser spot tracking. The scanned-cantilever AFM uses the separate flexure x-y scanner and z scanner instead of the conventional piezoelectric tube scanner. The closed-loop control and integrated capacitive sensors of these scanners can insure that the images of samples have excellent linearity and stability. According to the experimental results, the scanned-cantilever AFM can realize maximal 100 × 100 (μm) scanning range, and 1-nm resolution in z direction, which can meet the requirements of large scale sample testing.

  12. Collection Mapping.

    Science.gov (United States)

    Harbour, Denise

    2002-01-01

    Explains collection mapping for library media collections. Discusses purposes for creating collection maps, including helping with selection and weeding decisions, showing how the collection supports the curriculum, and making budget decisions; and methods of data collection, including evaluating a collaboratively taught unit with the classroom…

  13. Affective Maps

    DEFF Research Database (Denmark)

    Salovaara-Moring, Inka

    of environmental knowledge production. It uses InfoAmazonia, the databased platform on Amazon rainforests, as an example of affective geo-visualization within information mapping that enhances embodiment in the experience of the information. Amazonia is defined as a digitally created affective (map)space within...

  14. Causal mapping

    DEFF Research Database (Denmark)

    Rasmussen, Lauge Baungaard

    2006-01-01

    The lecture note explains how to use the causal mapping method as well as the theoretical framework aoosciated to the method......The lecture note explains how to use the causal mapping method as well as the theoretical framework aoosciated to the method...

  15. Influence of chemical admixtures on the dispersion of carbon nanotubes in water and cement pastes

    Science.gov (United States)

    Liu, Hui; Cui, Suping; Wang, Jiachen; Wang, Jianfeng

    2017-03-01

    The influence of ultrasonic and three types of chemical surfactants (including cationic surfactants: CTAB, anionic surfactants: SDS, and nonionic surfactants: TX-405) on the dispersion of CNTs was investigated. The techniques include UV-Vis-NIR spectrophotometer, laser particle size analyser and scanning electrical microscope (SEM). The results show that: 1) Ultrasonic leads to a dispersive effect on CNTs in water, and the optimal ultrasonic time is 120 s; 2) Three types of surfactants have positive effects on the dispersion of CNTs in water, among which cationic surfactant (CATB) leads to the best dispersibility; 3) CNTs with more carboxyl groups show better dispersion in water indicated from UV-vis-NIR spectra and particle size measurement; 4) The optimum concentration of surfactants is 5:1 (the mass ratio of dispersant to CNTs); 5) Three types of surfactants can improve the dispersion of CNTs in cement pastes indicated from SEM images at the optimum dosage.

  16. A Scanning Cavity Microscope

    CERN Document Server

    Mader, Matthias; Hänsch, Theodor W; Hunger, David

    2014-01-01

    Imaging of the optical properties of individual nanosystems beyond fluorescence can provide a wealth of information. However, the minute signals for absorption and dispersion are challenging to observe, and only specialized techniques requiring sophisticated noise rejection are available. Here we use signal enhancement in a scanning optical microcavity to demonstrate ultra-sensitive imaging. Harnessing multiple interactions of probe light with a sample within an optical resonator, we achieve a 1700-fold signal enhancement compared to diffraction-limited microscopy. We demonstrate quantitative imaging of the extinction cross section of gold nanoparticles with a sensitivity below 1 nm2, we show a method to improve spatial resolution potentially below the diffraction limit by using higher order cavity modes, and we present measurements of the birefringence and extinction contrast of gold nanorods. The demonstrated simultaneous enhancement of absorptive and dispersive signals promises intriguing potential for opt...

  17. Automatic Ultrasound Scanning

    DEFF Research Database (Denmark)

    Moshavegh, Ramin

    Medical ultrasound has been a widely used imaging modality in healthcare platforms for examination, diagnostic purposes, and for real-time guidance during surgery. However, despite the recent advances, medical ultrasound remains the most operator-dependent imaging modality, as it heavily relies...... on the user adjustments on the scanner interface to optimize the scan settings. This explains the huge interest in the subject of this PhD project entitled “AUTOMATIC ULTRASOUND SCANNING”. The key goals of the project have been to develop automated techniques to minimize the unnecessary settings...... on the scanners, and to improve the computer-aided diagnosis (CAD) in ultrasound by introducing new quantitative measures. Thus, four major issues concerning automation of the medical ultrasound are addressed in this PhD project. They touch upon gain adjustments in ultrasound, automatic synthetic aperture image...

  18. Micro scanning probes

    CERN Document Server

    Niblock, T

    2001-01-01

    This thesis covers the design methodology, theory, modelling, fabrication and evaluation of a Micro-Scanning-Probe. The device is a thermally actuated bimorph quadrapod fabricated using Micro Electro Mechanical Systems technology. A quadrapod is a structure with four arms, in this case a planar structure with the four arms forming a cross which is dry etched out of a silicon diaphragm. Each arm has a layer of aluminium deposited on it forming a bimorph. Through heating each arm actuation is achieved in the plane of the quadrapod and the direction normal to it. Fabrication of the device has required the development of bulk micromachining techniques to handle post CMOS fabricated wafers and the patterning of thickly sputtered aluminium in bulk micro machined cavities. CMOS fabrication techniques were used to incorporate diodes onto the quadrapod arms for temperature measurement of the arms. Fine tungsten and silicon tips have also been fabricated to allow tunnelling between the tip and the platform at the centr...

  19. Effect of Mineral Admixtures on Sulfate Attack Resistance of Cement-Based Materials%矿物掺合料改善水泥基材料抗硫酸盐侵蚀性能的微观分析

    Institute of Scientific and Technical Information of China (English)

    李华; 孙伟; 左晓宝

    2012-01-01

    采用CT、X射线衍射、扫描电子显微镜等测试方法,通过对不掺矿物掺合料以及掺30%粉煤灰或50%矿渣的水泥净浆、水泥砂浆在室温下5%Na2SO4溶液中浸泡2a后的宏观破坏形态和浆体组分及浆体形貌的分析,从微观层次上研究了矿物掺合料对水泥基材料抗硫酸盐侵蚀破坏的影响。结果表明:侵蚀后不掺矿物掺合料的试件由表及里呈现三层不同侵蚀状态,即表层石膏区、中层钙矾石区以及内层未侵蚀区。矿物掺合料的C3A含量稀释效应、火山灰反应以及微集料填充效应协同作用的结果使得试件的抗硫酸钠溶液侵蚀破坏性能显著提高。但矿渣中活性Al3+含量较高,能与SO42–反应生成大量钙矾石晶体,掺量不当会对试件的抗硫酸钠侵蚀性能不利。砂集料有阻碍微裂纹发展及增大试样内部不均匀性的相反作用,集料的含量、颗粒尺寸及分布对水泥基材料的抗硫酸钠侵蚀破坏性能的影响是以后研究中需关注的问题。%The appearance observation, mineral composition, as well ;as microstructure morphology towards various cement pastes and motars with and without 30% fly ash or 50% slag dipped in 5% Na2SO4 solution at room temperature for 2 years were characterized by X-CT, X-ray diffraction and scanning electron microscopy to investigate the effects of mineral admixtures such as slag and fly ash on the sulfate resistance performance of cement-based materials from the micro-level angle. The results show that the specimens without mineral admixtures appear three different attack states from surface to inside, i.e., the gypsum area, the ettringite area and the unaffected area. Mineral admixtures can improve the sulfate resistance performance of cement-based materials via synergy effect of reducing C3A content, pozzolanic reaction and micro-aggregates filling. However, the improper content of slag in cement-based mate- rials has a negative effect on

  20. Scanning Emitter Lifetime Imaging Microscopy for Spontaneous Emission Control

    DEFF Research Database (Denmark)

    Frimmer, Martin; Chen, Yuntian; Koenderink, A. Femius

    2011-01-01

    We report an experimental technique to map and exploit the local density of optical states of arbitrary planar nanophotonic structures. The method relies on positioning a spontaneous emitter attached to a scanning probe deterministically and reversibly with respect to its photonic environment while...

  1. A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome.

    Science.gov (United States)

    Mathias, Rasika Ann; Taub, Margaret A; Gignoux, Christopher R; Fu, Wenqing; Musharoff, Shaila; O'Connor, Timothy D; Vergara, Candelaria; Torgerson, Dara G; Pino-Yanes, Maria; Shringarpure, Suyash S; Huang, Lili; Rafaels, Nicholas; Boorgula, Meher Preethi; Johnston, Henry Richard; Ortega, Victor E; Levin, Albert M; Song, Wei; Torres, Raul; Padhukasahasram, Badri; Eng, Celeste; Mejia-Mejia, Delmy-Aracely; Ferguson, Trevor; Qin, Zhaohui S; Scott, Alan F; Yazdanbakhsh, Maria; Wilson, James G; Marrugo, Javier; Lange, Leslie A; Kumar, Rajesh; Avila, Pedro C; Williams, L Keoki; Watson, Harold; Ware, Lorraine B; Olopade, Christopher; Olopade, Olufunmilayo; Oliveira, Ricardo; Ober, Carole; Nicolae, Dan L; Meyers, Deborah; Mayorga, Alvaro; Knight-Madden, Jennifer; Hartert, Tina; Hansel, Nadia N; Foreman, Marilyn G; Ford, Jean G; Faruque, Mezbah U; Dunston, Georgia M; Caraballo, Luis; Burchard, Esteban G; Bleecker, Eugene; Araujo, Maria Ilma; Herrera-Paz, Edwin Francisco; Gietzen, Kimberly; Grus, Wendy E; Bamshad, Michael; Bustamante, Carlos D; Kenny, Eimear E; Hernandez, Ryan D; Beaty, Terri H; Ruczinski, Ingo; Akey, Joshua; Barnes, Kathleen C

    2016-10-11

    The African Diaspora in the Western Hemisphere represents one of the largest forced migrations in history and had a profound impact on genetic diversity in modern populations. To date, the fine-scale population structure of descendants of the African Diaspora remains largely uncharacterized. Here we present genetic variation from deeply sequenced genomes of 642 individuals from North and South American, Caribbean and West African populations, substantially increasing the lexicon of human genomic variation and suggesting much variation remains to be discovered in African-admixed populations in the Americas. We summarize genetic variation in these populations, quantifying the postcolonial sex-biased European gene flow across multiple regions. Moreover, we refine estimates on the burden of deleterious variants carried across populations and how this varies with African ancestry. Our data are an important resource for empowering disease mapping studies in African-admixed individuals and will facilitate gene discovery for diseases disproportionately affecting individuals of African ancestry.

  2. Association Mapping for Drought Tolerance of Rice (Oryza sativa L.) at Vegetative Stage

    Institute of Scientific and Technical Information of China (English)

    Yulong XIAO; Chuanyuan YU; Jianguo LEI; Quirino D; DELA CRUZ; Jonalyn M.YABES; Dindo A.TABANAo

    2012-01-01

    [Objective] This study aimed to identify possible quantitative trait loci (QTL) for vegetative drought tolerance traits of rice (Oryza sativa L.). [Method] A total of 184 rice genotypes were field screened and 156 SSR markers randomly distributed at each 3 Mb bin were used through genome-wide scanning method and association analysis to detect QTLs for vegetative drought tolerance traits leaf rolling (LER), leaf drying (LED) and drought recovery rate (DRR). [Result] The experimental rice geno- types showed varied response under vegetative drought, LER, LED and DRR were highly correlated. Population structure was detected at K=3 and K=7, certain extent of admixture existed in the experimental rice genotypes, relative kinship of the rice genotypes ranged from 0 to 0.924 5. Significant linkage disequilibrium among SSR markers was detected. Sixteen SSR markers have been detected to be associated with vegetative drought tolerance traits, four for LER, eight for LED and four for DDR. Most of the markers were associated with more than one trait, indicating a single mechanism might involve in expression of several related traits, i.e. osmotic adjustment. RM107 (Chr.9) was associated with all the three traits and fell exactly within or closely nearby to previous reported regions, was a major QTL for vegeta- tive drought tolerance, RM477 (Chr.8) was significantly associated with DRR and ex- tremely significantly associated with LER was probably another major QTL for vege- tative drought tolerance. [Conclusion] Association mapping is a very effective method for describing complex traits like drought tolerance.

  3. Implementation of ionoluminescence in the AGLAE scanning external microprobe

    Science.gov (United States)

    Pichon, L.; Calligaro, T.; Gonzalez, V.; Lemasson, Q.; Moignard, B.; Pacheco, C.

    2015-04-01

    The scope of this work is to present the implementation of an IBIL imaging system in the scanning external microprobe of the AGLAE facility so as to correlate luminescence and composition maps provided by PIXE, RBS and PIGE. The challenging integration of the optical spectrometer, due to incompatibility of acquisition timings and data formats with the other IBA channels has motivated the development of a specific acquisition system. This article details the IBIL setup and explains the technical solutions retained for the coupling of IBIL with IBA techniques in order to produce fast and large IBIL-IBA maps. The IBIL maps stored in the same format as the PIXE, RBS and PIGE ones can be visualised and compared using the dedicated AGLAEmap program or the PyMCA processing package. An example of such a coupled mapping on Mesoamerican jade is presented to emphasise the interest of performing simultaneously IBA and IBIL large mappings.

  4. CALS Mapping

    DEFF Research Database (Denmark)

    Collin, Ib; Nielsen, Povl Holm; Larsen, Michael Holm

    1998-01-01

    To enhance the industrial applications of CALS, CALS Center Danmark has developed a cost efficient and transparent assessment, CALS Mapping, to uncover the potential of CALS - primarily dedicated to small and medium sized enterprises. The idea behind CALS Mapping is that the CALS State...... enterprise is, when applied in a given organisation modified with respect to the industry regarded, hence irrelevant measure parameters are eliminated to avoid redundancy. This assessment of CALS Mapping, quantify the CALS potential of an organisation with the purpose of providing decision support to the top...

  5. Composts with and without wood ash admixture for the management of tropical acid soils: chemical, physical and microbiological effects

    Science.gov (United States)

    Bougnom, B. P.; Insam, H.; Etoa, F. X.

    2009-04-01

    Acid soils generally found in the tropics have a low pH, are poor in organic matter, deficient in Ca2+, Mg+, P, or Mo ; limited in mineralization, nitrification, nodulation, and mycorrhizal infection , suffer from Al or Mn toxicity. Within the framework aiming at using organic wastes and wood ash to overcome soil infertility in tropical acidic soils, a green house experiment was conducted with two acid soils collected from Cameroon (Ferralsol and Acrisol) and amended with three types of compost 3:1(W/W) containing 0 (K0), 8(K8) and 16% (K16) wood ash admixture respectively for two consecutive cycles of 100 days, during which soybean (Glycine max) was grown on the first, the second cycle was left as fallow. Generally the same trends of variation of the physico-chemical parameters were observed in both soils. Addition of organic wastes increased the pH electrical conductivity, soil organic matter, water holding capacity, total Carbone and total nitrogen as compared to the controls. The rate of nitrification highly increased posing the problem of possible leaching of nitrates in the ground water. The cations and micronutrients content followed the same trends. These changes leaded to an increase of the P availability and a decrease of Al toxicity. At the end of the second cycle, generally most of the different parameters slightly decreased except for the electrical conductivity. All composts passed a toxicity test, and the amended soils had significant better fresh and dried plant biomass, the Total nitrogen also significantly increased. Amended soils with K0 generally performed better than those amended with K8 and K16, thinking that their pH (closer to the neutrality) was responsible of these performances, all the parameters were significantly correlated to the pH. K8 and K16 performances could be performed by reducing the added quantities. The study of PCR-DGGE have shown a shift in the fungal and bacterial communities, Ammonia oxidizing bacteria community were

  6. GPR scan assessment

    Directory of Open Access Journals (Sweden)

    Abbas M. Abbas

    2015-06-01

    Full Text Available Mekaad Radwan monument is situated in the neighborhood of Bab Zuweila in the historical Cairo, Egypt. It was constructed at the middle XVII century (1635 AD. The building has a rectangle shape plan (13 × 6 m with the longitudinal sides approximately WNW-ESE. It comprises three storages namely; the ground floor; the opened floor (RADWAN Bench and the living floor with a total elevation of 15 m above the street level. The building suffers from severe deterioration phenomena with patterns of damage which have occurred over time. These deterioration and damages could be attributed to foundation problems, subsoil water and also to the earthquake that affected the entire Greater Cairo area in October 1992. Ground Penetrating Radar (GPR scan was accomplished against the walls of the opened floor (RADWAN Bench to evaluate the hazard impact on the walls textures and integrity. The results showed an anomalous feature through the southern wall of RADWAN Bench. A mathematical model has been simulated to confirm the obtained anomaly and the model response exhibited a good matching with the outlined anomaly.

  7. Differential scanning calorimetry.

    Science.gov (United States)

    Spink, Charles H

    2008-01-01

    Differential scanning calorimetry (DSC) has emerged as a powerful experimental technique for determining thermodynamic properties of biomacromolecules. The ability to monitor unfolding or phase transitions in proteins, polynucleotides, and lipid assemblies has not only provided data on thermodynamic stability for these important molecules, but also made it possible to examine the details of unfolding processes and to analyze the characteristics of intermediate states involved in the melting of biopolymers. The recent improvements in DSC instrumentation and software have generated new opportunities for the study of the effects of structure and changes in environment on the behavior of proteins, nucleic acids, and lipids. This review presents some of the details of application of DSC to the examination of the unfolding of biomolecules. After a brief introduction to DSC instrumentation used for the study of thermal transitions, the methods for obtaining basic thermodynamic information from the DSC curve are presented. Then, using DNA unfolding as an example, methods for the analysis of the melting transition are presented that allow deconvolution of the DSC curves to determine more subtle characteristics of the intermediate states involved in unfolding. Two types of transitions are presented for analysis, the first example being the unfolding of two large synthetic polynucleotides, which display high cooperativity in the melting process. The second example shows the application of DSC for the study of the unfolding of a simple hairpin oligonucleotide. Details of the data analysis are presented in a simple spreadsheet format.

  8. LANL Robotic Vessel Scanning

    Energy Technology Data Exchange (ETDEWEB)

    Webber, Nels W. [Los Alamos National Lab. (LANL), Los Alamos, NM (United States)

    2015-11-25

    Los Alamos National Laboratory in J-1 DARHT Operations Group uses 6ft spherical vessels to contain hazardous materials produced in a hydrodynamic experiment. These contaminated vessels must be analyzed by means of a worker entering the vessel to locate, measure, and document every penetration mark on the vessel. If the worker can be replaced by a highly automated robotic system with a high precision scanner, it will eliminate the risks to the worker and provide management with an accurate 3D model of the vessel presenting the existing damage with the flexibility to manipulate the model for better and more in-depth assessment.The project was successful in meeting the primary goal of installing an automated system which scanned a 6ft vessel with an elapsed time of 45 minutes. This robotic system reduces the total time for the original scope of work by 75 minutes and results in excellent data accumulation and transmission to the 3D model imaging program.

  9. Mapping VADEMECUM

    OpenAIRE

    1992-01-01

    The work plan for the implementation of the Convention on Long-Range Transboundary Air Pollution under the UN Economic Commission for Europe (UN ECE) includes the production of maps of critical loads, critical levels, and exceedances as a basis for developing potential abatement strategies for sulphur and nitrogen. This Vademecum is designed to provide guidance to those responsible for calculating and mapping critical loads, critical levels, and exceedances on a national or regional scale. Th...

  10. Improvement Concretes Outside Admixture and Cement Compatible Measure%论改善混凝土外掺剂与水泥适应性的措施

    Institute of Scientific and Technical Information of China (English)

    赵小萍

    2009-01-01

    文章论述了水泥与外加剂的适应性是影响混凝土质量的重要因素,提出几点改善措施:即新型高性能减水荆的开发应用、外加剂的复合使用、减水剂的掺入方法、适当"增硫法"和适当调整混凝土配合比.%This article elaborated the cement and the admixture compatibility is affects the concretes quality the important attribute, proposes sev-eral improvement measures: new high performance water reducing agent development application, admixture compound use, the water reducing a-gent mixes in the method, suitable "increases the sulfur law", appropriate readjustment proportioning of concrete.

  11. The isospin admixture of the ground state and the properties of the isobar analog resonances in medium and heavy mass nuclei

    Indian Academy of Sciences (India)

    D I Salmov; T Babacan; A Kücükbursa; S Ünlü; İ Maraṣ

    2006-06-01

    Within the framework of quasiparticle random phase approximation (QRPA), Pyatov–Salamov method [23] for the self-consistent determination of the isovector effective interaction strength parameter, restoring a broken isotopic symmetry for the nuclear part of the Hamiltonian, is used. The isospin admixtures in the ground state of the parent nucleus, and the isospin structure of the isobar analog resonance (IAR) state were investigated with the inclusion of the pairing correlations between nucleons for the medium and heavy mass regions: 80 < < 90, 102 < < 124, and 204 < < 214. It was determined that the influence of the pairing interaction between nucleons on the isospin admixtures in the ground state and the isospin structure of the IAR state is more pronounced for the light isotopes ( ≈ ) of the investigated nuclei.

  12. Standard test method for determining effects of chemical admixtures on corrosion of embedded steel reinforcement in concrete exposed to chloride environments

    CERN Document Server

    American Society for Testing and Materials. Philadelphia

    2007-01-01

    1.1 This test method covers a procedure for determining the effects of chemical admixtures on the corrosion of metals in concrete. This test method can be used to evaluate materials intended to inhibit chloride-induced corrosion of steel in concrete. It can also be used to evaluate the corrosivity of admixtures in a chloride environment. 1.2 The values stated in SI units are to be regarded as the standard. The values given in parentheses are for information only. 1.3 This standard does not purport to address all of the safety concerns, if any, associated with its use. It is the responsibility of the user of this standard to establish appropriate safety and health practices and determine the applicability of regulatory limitations prior to use.

  13. Voltammetric scanning electrochemical cell microscopy: dynamic imaging of hydrazine electro-oxidation on platinum electrodes

    NARCIS (Netherlands)

    Chen, C.-H.; Jacobse, L.; McKelvey, K.; Lai, S.C.S.; Koper, M.T.M.; Unwin, P.R.

    2015-01-01

    Voltammetric scanning electrochemical cell microscopy (SECCM) incorporates cyclic voltammetry measurements in the SECCM imaging protocol, by recording electrochemical currents in a wide potential window at each pixel in a map. This provides much more information compared to traditional fixed potenti

  14. Autosomal and X-linked single nucleotide polymorphisms reveal a steep Asian-Melanesian ancestry cline in eastern Indonesia and a sex bias in admixture rates.

    Science.gov (United States)

    Cox, Murray P; Karafet, Tatiana M; Lansing, J Stephen; Sudoyo, Herawati; Hammer, Michael F

    2010-05-22

    The geographical region between mainland Asia and New Guinea is characterized by numerous small islands with isolated human populations. Phenotypically, groups in the west are similar to their neighbours in mainland Southeast Asia, eastern groups near New Guinea are similar to Melanesians, and intervening populations are intermediate in appearance. A long-standing question is whether this pattern primarily reflects mixing between groups with distinct origins or whether natural selection has shaped this range of variation by acting differentially on populations across the region. To address this question, we genotyped a set of 37 single nucleotide polymorphisms that are evolutionarily independent, putatively neutral and highly informative for Asian-Melanesian ancestry in 1430 individuals from 60 populations spanning mainland Asia to Melanesia. Admixture analysis reveals a sharp transition from Asian to Melanesian genetic variants over a narrow geographical region in eastern Indonesia. Interestingly, this admixture cline roughly corresponds to the human phenotypic boundary noted by Alfred Russell Wallace in 1869. We conclude that this phenotypic gradient probably reflects mixing of two long-separated ancestral source populations-one descended from the initial Melanesian-like inhabitants of the region, and the other related to Asian groups that immigrated during the Paleolithic and/or with the spread of agriculture. A higher frequency of Asian X-linked markers relative to autosomal markers throughout the transition zone suggests that the admixture process was sex-biased, either favouring a westward expansion of patrilocal Melanesian groups or an eastward expansion of matrilocal Asian immigrants. The matrilocal marriage practices that dominated early Austronesian societies may be one factor contributing to this observed sex bias in admixture rates.

  15. Autosomal and X-linked single nucleotide polymorphisms reveal a steep Asian–Melanesian ancestry cline in eastern Indonesia and a sex bias in admixture rates

    Science.gov (United States)

    Cox, Murray P.; Karafet, Tatiana M.; Lansing, J. Stephen; Sudoyo, Herawati; Hammer, Michael F.

    2010-01-01

    The geographical region between mainland Asia and New Guinea is characterized by numerous small islands with isolated human populations. Phenotypically, groups in the west are similar to their neighbours in mainland Southeast Asia, eastern groups near New Guinea are similar to Melanesians, and intervening populations are intermediate in appearance. A long-standing question is whether this pattern primarily reflects mixing between groups with distinct origins or whether natural selection has shaped this range of variation by acting differentially on populations across the region. To address this question, we genotyped a set of 37 single nucleotide polymorphisms that are evolutionarily independent, putatively neutral and highly informative for Asian–Melanesian ancestry in 1430 individuals from 60 populations spanning mainland Asia to Melanesia. Admixture analysis reveals a sharp transition from Asian to Melanesian genetic variants over a narrow geographical region in eastern Indonesia. Interestingly, this admixture cline roughly corresponds to the human phenotypic boundary noted by Alfred Russell Wallace in 1869. We conclude that this phenotypic gradient probably reflects mixing of two long-separated ancestral source populations—one descended from the initial Melanesian-like inhabitants of the region, and the other related to Asian groups that immigrated during the Paleolithic and/or with the spread of agriculture. A higher frequency of Asian X-linked markers relative to autosomal markers throughout the transition zone suggests that the admixture process was sex-biased, either favouring a westward expansion of patrilocal Melanesian groups or an eastward expansion of matrilocal Asian immigrants. The matrilocal marriage practices that dominated early Austronesian societies may be one factor contributing to this observed sex bias in admixture rates. PMID:20106848

  16. Northern range expansion of European populations of the wasp spider Argiope bruennichi is associated with global warming-correlated genetic admixture and population-specific temperature adaptations.

    Science.gov (United States)

    Krehenwinkel, Henrik; Tautz, Diethard

    2013-04-01

    Poleward range expansions are observed for an increasing number of species, which may be an effect of global warming during the past decades. However, it is still not clear in how far these expansions reflect simple geographical shifts of species ranges, or whether new genetic adaptations play a role as well. Here, we analyse the expansion of the wasp spider Argiope bruennichi into Northern Europe during the last century. We have used a range-wide sampling of contemporary populations and historical specimens from museums to trace the phylogeography and genetic changes associated with the range shift. Based on the analysis of mitochondrial, microsatellite and SNP markers, we observe a higher level of genetic diversity in the expanding populations, apparently due to admixture of formerly isolated lineages. Using reciprocal transplant experiments for testing overwintering tolerance, as well as temperature preference and tolerance tests in the laboratory, we find that the invading spiders have possibly shifted their temperature niche. This may be a key adaptation for survival in Northern latitudes. The museum samples allow a reconstruction of the invasion's genetic history. A first, small-scale range shift started around 1930, in parallel with the onset of global warming. A more massive invasion of Northern Europe associated with genetic admixture and morphological changes occurred in later decades. We suggest that the latter range expansion into far Northern latitudes may be a consequence of the admixture that provided the genetic material for adaptations to new environmental regimes. Hence, global warming could have facilitated the initial admixture of populations and this resulted in genetic lineages with new habitat preferences.

  17. HLA class I variation controlled for genetic admixture in the Gila River Indian Community of Arizona: a model for the Paleo-Indians.

    Science.gov (United States)

    Williams, R C; McAuley, J E

    1992-01-01

    The genetic distribution of the HLA class I loci is presented for 619 "full blooded" Pima and Tohono O'odham Native Americans (Pimans) in the Gila River Indian Community. Variation in the Pimans is highly restricted. There are only three polymorphic alleles at the HLA-A locus, *A2, *A24, and *A31, and only 10 alleles with a frequency greater than 0.01 at HLA-B where *Bw48 (0.187), *B35 (0.173), and the new epitope *BN21 (0.143) have the highest frequencies. Two and three locus disequilibria values and haplotype frequencies are presented. Ten three-locus haplotypes account for more than 50% of the class I variation, with *A24 *BN21 *Cw3 (0.085) having the highest frequency. Gm allotypes demonstrate that little admixture from non-Indian populations has entered the Community since the 17th century when Europeans first came to this area. As a consequence many alleles commonly found in Europeans and European Americans are efficient markers for Caucasian admixture, while the "private" Indian alleles, *BN21 and *Bw48, can be used to measure Native American admixture in Caucasian populations. It is suggested that this distribution in "full blooded" Pimans approximates that of the Paleo-Indian migrants who first entered the Americas between 20,000 and 40,000 years ago.

  18. Investigations regarding the mass budget in the propagation of a passive admixture from a line source; Untersuchungen zur Stoffbilanz bei der Ausbreitung einer passiven Beimengung aus einer Linienquelle

    Energy Technology Data Exchange (ETDEWEB)

    Wenzel, A. [Brandenburgische Technische Univ. Cottbus (Germany). Inst. fuer Boden-, Luft- und Gewaesserschutz

    1998-01-01

    Under stationary conditions, passive admixtures are transported by advection and by vertical as well as horizontal turbulent diffusion. The importance of individual contributions for the exchange of passive admixtures emanating from a straight line source with a constant source strength under neutral stratification conditions is discussed. For this purpose, all terms of the mass budget for a control volume around a straight line source are calculated using a stochastic Lagrange model (LS), whose properties are discussed. As a test for the LS model, the vertical and horizontal mass flows in the soil layer are simulated and compared with SANA data. The mass flows calculated for the propagation of a passive admixture from a line source are evaluated regarding their share of the mass budget. (orig.) [Deutsch] Unter stationaeren Bedingungen erfolgt der Transport von passiven Beimengungen durch Advektion sowie vertikale und horizontale turbulente Diffusion. Die Bedeutung der einzelnen Beitraege fuer den Austausch von passiven Beimengungen, die von einer geraden Linienquelle mit konstanter Quellstaerke unter neutralen Schichtungsbedingungen ausgehen, wird diskutiert. Dazu werden mit einem Lagrangeschen stochastischen (LS) Modell, dessen Eigenschaften besprochen werden, alle Terme der Stoffbilanz fuer ein Kontrollvolumen um eine gerade Linienquelle berechnet. Als Test fuer das LS-Modell werden die vertikalen und die horizontalen Stofffluesse in der Bodenschicht simuliert und mit SANA-Daten verglichen. Die fuer die Ausbreitung einer passiven Beimengung von einer Linienquelle berechneten Massenfluesse, werden hinsichtlich ihres Anteils an der Stoffbilanz ausgewertet. (orig.)

  19. Relationship of prevalence of non-insulin-dependent diabetes mellitus to Amerindian admixture in the Mexican Americans of San Antonio, Texas.

    Science.gov (United States)

    Chakraborty, R; Ferrell, R E; Stern, M P; Haffner, S M; Hazuda, H P; Rosenthal, M

    1986-01-01

    A genetic and epidemiological survey of non-insulin-dependent diabetes mellitus (NIDDM) was conducted among the Mexican Americans residing in three socioeconomically distinct areas of San Antonio, Texas: a low socioeconomic (SES) traditional area (barrio), a middle SES, ethnically balanced area (transitional), and a high SES, predominantly Anglo area (suburb). Seventeen polymorphic markers were used to relate the prevalences of NIDDM with the extent of Amerindian ancestry of 1,237 Mexican Americans of these three residential areas. While only the RH and haptoglobin loci showed evidence of association with NIDDM, an admixture analysis of the combined allele frequency data revealed a pattern of decreasing NIDDM prevalence with increasing socioeconomic status (as approximated by neighborhood of residence) and a parallel decrease in Amerindian ancestry. The rank-order correlation between NIDDM prevalence and Amerindian admixture is 0.943 (P less than .001) for the crude prevalence rate and 0.829 (P less than .02) for the age-adjusted rate. Nested gene diversity analysis revealed that the heterogeneity of allele frequencies is more pronounced when individuals were classified by their NIDDM disease status as compared to the classification by neighborhood. Estimation of Amerindian ancestry of each individual did not reveal any significant change in the shape of the distributions of individual admixture proportions in diabetics as compared to the controls. Nevertheless, the results suggest that genetic factors partially explain the differences in NIDDM prevalence observed between the Mexican American and Anglo populations in the southwestern United States.

  20. Progress in Lignin-based Concrete Admixtures%含木质素基混凝土外加剂的研究进展

    Institute of Scientific and Technical Information of China (English)

    谌凡琪

    2012-01-01

    综述了木质素在混凝土外加剂中的应用。工业木质素,尤其是木质素磺酸盐,可以充当混凝土减水剂、缓凝剂、引气剂和泵送剂。由于未经改性的工业木质素性能不够理想,为了提高木质素基混凝土添加剂的性能,宜对其进行适当的改性。碱木质素经过氧化、磺化、磺甲基化、接枝共聚等改性后,可以得到具有良好性能的混凝土外加剂。%The applications of lignin derivatives in concrete admixtures are reviewed. Technical lignins, especially lignosulfonates, can serve as concrete water reducers, retarders, air entraining agents and pumping agents. The performance of lignin is not good. Some appropriate modifications are sometimes required in order to improve the performance of the lignin-based concrete admixtures. Lignin-based concrete admixtures with good performaces can be obtained fxom alkali lignin after modifications such as oxidation, sulfonation, sulfomethylation and graft copolymerization.

  1. Effect of Expansive Admixtures on the Shrinkage and Mechanical Properties of High-Performance Fiber-Reinforced Cement Composites

    Directory of Open Access Journals (Sweden)

    Won-Chang Choi

    2013-01-01

    Full Text Available High-performance fiber-reinforced cement composites (HPFRCCs are characterized by strain-hardening and multiple cracking during the inelastic deformation process, but they also develop high shrinkage strain. This study investigates the effects of replacing Portland cement with calcium sulfoaluminate-based expansive admixtures (CSA EXAs to compensate for the shrinkage and associated mechanical behavior of HPFRCCs. Two types of CSA EXA (CSA-K and CSA-J, each with a different chemical composition, are used in this study. Various replacement ratios (0%, 8%, 10%, 12%, and 14% by weight of cement of CSA EXA are considered for the design of HPFRCC mixtures reinforced with 1.5% polyethylene (PE fibers by volume. Mechanical properties, such as shrinkage compensation, compressive strength, flexural strength, and direct tensile strength, of the HPFRCC mixtures are examined. Also, crack width and development are investigated to determine the effects of the EXAs on the performance of the HPFRCC mixtures, and a performance index is used to quantify the performance of mixture. The results indicate that replacements of 10% CSA-K (Type 1 and 8% CSA-J (Type 2 considerably enhance the mechanical properties and reduce shrinkage of HPFRCCs.

  2. Growth, structural, spectral, mechanical, thermal and dielectric characterization of phosphoric acid admixtured L-alanine (PLA) single crystals

    Science.gov (United States)

    Rose, A. S. J. Lucia; Selvarajan, P.; Perumal, S.

    2011-10-01

    Phosphoric acid admixtured L-alanine (PLA) single crystals were grown successfully by solution method with slow evaporation technique at room temperature. Crystals of size 18 mm × 12 mm × 8 mm have been obtained in 28 days. The grown crystals were colorless and transparent. The solubility of the grown samples has been found out at various temperatures. The lattice parameters of the grown crystals were determined by X-ray diffraction technique. The reflection planes of the sample were confirmed by the powder X-ray diffraction study and diffraction peaks were indexed. Fourier transform infrared (FTIR) studies were used to confirm the presence of various functional groups in the crystals. UV-visible transmittance spectrum was recorded to study the optical transparency of grown crystal. The nonlinear optical (NLO) property of the grown crystal was confirmed by Kurtz-Perry powder technique and a study of its second harmonic generation efficiency in comparison with potassium dihydrogen phosphate (KDP) has been made. The mechanical strength of the crystal was estimated by Vickers hardness test. The grown crystals were subjected to thermo gravimetric and differential thermal analysis (TG/DTA). The dielectric behavior of the sample was also studied.

  3. Genetic admixture and diversity estimations in the Mexican Mestizo population from Mexico City using 15 STR polymorphic markers.

    Science.gov (United States)

    Juárez-Cedillo, Teresa; Zuñiga, Joaquín; Acuña-Alonzo, Victor; Pérez-Hernández, Nonanzit; Rodríguez-Pérez, José Manuel; Barquera, Rodrigo; Gallardo, Guillermo J; Sánchez-Arenas, Rosalinda; García-Peña, Maria Del Carmen; Granados, Julio; Vargas-Alarcón, Gilberto

    2008-06-01

    The 15 AmpFlSTR Identifiler loci D8S1179, D21S11, D7S820, CSF1PO, D3S1358, TH01, D13S317, D16S539, D2S1338, D19S433, vWA, TPOX, D18S51, D5S818 and FGA were analyzed in a sample of 378 unrelated individuals from Mexico City, Mexico. Significant deviations from HW equilibrium in 14/15 STR loci alleles were not detected. The D18S51 locus had the highest power of discrimination (0.970). Genetic admixture estimations revealed a 69% of Amerindian, 26% of European and 5% of African contribution. Comparative analyses between Mexicans and other neighboring populations reveal significant differences in genetic diversity. Our results are important for future comparative genetic studies in different Latin American ethnic groups, particularly Mexican Mestizos and Amerindians. They should also be helpful in genetics, population evolution, forensic and paternity testing.

  4. CP violation and CKM phases from angular distributions for B$_{s}$ decays into admixtures of CP eigenstates

    CERN Document Server

    Fleischer, Robert; Fleischer, Robert; Dunietz, Isard

    1997-01-01

    We investigate the time-evolutions of angular distributions for B_s decays into final states that are admixtures of CP-even and CP-odd configurations. A sizable lifetime difference between the B_s mass eigenstates allows a probe of CP violation in time-dependent untagged angular distributions. Interference effects between different final state configurations of B_s\\to D^{*+}_s D^{*-}_s, J/\\psi \\phi determine the Wolfenstein parameter \\eta from untagged data samples, or -- if one uses |V_{ub}|/|V_{cb}| as an additional input -- the notoriously difficult to measure CKM angle \\gamma. Another determination of \\gamma is possible by using isospin symmetry of strong interactions to relate untagged data samples of B_s\\to K^{\\ast+} K^{\\ast-} and B_s\\to K^{\\ast0} \\overline{K^{\\ast0}}. We note that the untagged angular distribution for B_s\\to\\rho^0 \\phi provides interesting information about electroweak penguins.

  5. Properties of Calcium Acetate Manufactured with Etching Waste Solution and Limestone Sludge as a Cementitious High-Early-Strength Admixture

    Directory of Open Access Journals (Sweden)

    Deuck-Mo Kim

    2016-01-01

    Full Text Available Concrete is one of the most widely used construction materials. There are several methods available to improve its performance, with one of them being the use of high-early-strength admixtures (HESAs. Typical HESAs include calcium nitrate, calcium chloride, and calcium formate (CF. Industrial by-products, such as acetic acid and lime stone sludge (LSS, can be used together to produce calcium acetate (CA, which can subsequently be used as a cementitious HESA. In this study, calcium carbonate and LSS were mixed with cement in weight ratios of 1 : 1, 1 : 1.5, and 1 : 2, and the properties of the as-produced CA were evaluated. CA and CF were mixed with cement in different weight ratios (0, 1, 2, and 3 wt% to obtain CA- and CF-mortars, respectively. The flow behavior, setting time, pH, and compressive strength of these mortars were evaluated, and their X-ray diffraction patterns were also analyzed. It was found that as the CF content in the CF-mortar increased, the initial strength of the mortar also increased. However, it impaired its long-term strength. On the other hand, when 1% CA was mixed with cement, satisfactory early and long-term strengths were achieved. Thus, CA, which is obtained from industrial by-products, can be an effective HESA.

  6. Gallium scans in myasthenia gravis

    Energy Technology Data Exchange (ETDEWEB)

    Swick, H.M. (Univ. of Kentucky, Lexington); Preston, D.F.; McQuillen, M.P.

    1976-01-01

    A study was conducted to determine whether /sup 67/Ga scans could be used for the detection of thymomas and to investigate the activity of the thymus gland in patients with myasthenia gravis. Scans of the anterior mediastinum proved to be a reliable way to detect thymomas. The scans were positive in eight patients including three with myasthenia gravis and histologically proved thymomas, three others with severe myasthenia gravis and thymic tumors, and two with histologically proved thymomas not associated with myasthenia. Activity on /sup 67/Ga scans was not directly related to the increased activity of the thymus gland that is presumed to be associated with myasthenia gravis. (HLW)

  7. Re-scan confocal microscopy: scanning twice for better resolution

    NARCIS (Netherlands)

    De Luca, G.M.R.; Breedijk, R.M.P.; Brandt, R.A.J.; Zeelenberg, C.H.C.; De Jong, B.E.; Timmermans, W.; Nahidi Azar, L.; Hoebe, R.A.; Stallinga, S.; Manders, E.M.M.

    2013-01-01

    We present a new super-resolution technique, Re-scan Confocal Microscopy (RCM), based on standard confocal microscopy extended with an optical (re-scanning) unit that projects the image directly on a CCD-camera. This new microscope has improved lateral resolution and strongly improved sensitivity wh

  8. Re-scan confocal microscopy : scanning twice for better resolution

    NARCIS (Netherlands)

    De Luca, G.M.R.; Breedijk, R.M.P.; Brandt, R.A.J.; Zeelenberg, C.H.C.; de Jong, B.E.; Timmermans, W.; Azar, L.N.; Hoebe, R.A.; Stallinga, S.; Manders, E.M.M.

    2013-01-01

    We present a new super-resolution technique, Re-scan Confocal Microscopy (RCM), based on standard confocal microscopy extended with an optical (re-scanning) unit that projects the image directly on a CCD-camera. This new microscope has improved lateral resolution and strongly improved sensitivity wh

  9. SPIRE Map-Making Test Report

    CERN Document Server

    Xu, C Kevin; Beelen, Alexandre; Conversi, Luca; Konyves, Vera; Papageorgiou, Andreas; Piazzo, Lorenzo; Roussel, Helene; Schulz, Bernhard; Shupe, David

    2014-01-01

    The photometer section of SPIRE is one of the key instruments on board of Herschel. Its legacy depends very much on how well the scanmap observations that it carried out during the Herschel mission can be converted to high quality maps. In order to have a comprehensive assessment on the current status of SPIRE map-making, as well as to provide guidance for future development of the SPIRE scan-map data reduction pipeline, we carried out a test campaign on SPIRE map-making. In this report, we present results of the tests in this campaign.

  10. Mapping Deeply

    Directory of Open Access Journals (Sweden)

    Denis Wood

    2015-08-01

    Full Text Available This is a description of an avant la lettre deep mapping project carried out by a geographer and a number of landscape architecture students in the early 1980s. Although humanists seem to take the “mapping” in deep mapping more metaphorically than cartographically, in this neighborhood mapping project, the mapmaking was taken literally, with the goal of producing an atlas of the neighborhood. In this, the neighborhood was construed as a transformer, turning the stuff of the world (gas, water, electricity into the stuff of individual lives (sidewalk graffiti, wind chimes, barking dogs, and vice versa. Maps in the central transformer section of the atlas were to have charted this process in action, as in one showing the route of an individual newspaper into the neighborhood, then through the neighborhood to a home, and finally, as trash, out of the neighborhood in a garbage truck; though few of these had been completed when the project concluded in 1986. Resurrected in 1998 in an episode on Ira Glass’ This American Life, the atlas was finally published, as Everything Sings: Maps for a Narrative Atlas, in 2010 (and an expanded edition in 2013.

  11. Cognitive maps

    DEFF Research Database (Denmark)

    Minder, Bettina; Laursen, Linda Nhu; Lassen, Astrid Heidemann

    2014-01-01

    . Conceptual clustering is used to analyse and order information according to concepts or variables from within the data. The cognitive maps identified are validated through the comments of some of the same experts. The study presents three cognitive maps and respective world-views explaining how the design...... and innovation field are related and under which dimensions they differ. The paper draws preliminary conclusions on the implications of the different world- views on the innovation process. With the growing importance of the design approach in innovation e.g. design thinking, a clear conception...

  12. Bone Densitometry (Bone Density Scan)

    Science.gov (United States)

    ... of DXA Bone Densitometry? What is a Bone Density Scan (DXA)? Bone density scanning, also called dual-energy x-ray absorptiometry ( ... is today's established standard for measuring bone mineral density (BMD). An x-ray (radiograph) is a noninvasive ...

  13. Scanning deep level transient spectroscopy using an MeV ion microprobe

    Energy Technology Data Exchange (ETDEWEB)

    Laird, J.S.; Bardos, R.A.; Saint, A.; Moloney, G.M.; Legge, G.F.J. [Melbourne Univ., Parkville, VIC (Australia)

    1993-12-31

    Traditionally the scanning ion microprobe has given little or no information regarding the electronic structure of materials in particular semiconductors. A new imaging technique called Scanning Ion Deep Level Transient Spectroscopy (SIDLTS) is presented which is able to spatially map alterations in the band gap structure of materials by lattice defects or impurities. 3 refs., 2 figs.

  14. Lunar UV-visible-IR mapping interferometric spectrometer

    Science.gov (United States)

    Smith, W. Hayden; Haskin, L.; Korotev, R.; Arvidson, R.; Mckinnon, W.; Hapke, B.; Larson, S.; Lucey, P.

    1992-01-01

    Ultraviolet-visible-infrared mapping digital array scanned interferometers for lunar compositional surveys was developed. The research has defined a no-moving-parts, low-weight and low-power, high-throughput, and electronically adaptable digital array scanned interferometer that achieves measurement objectives encompassing and improving upon all the requirements defined by the LEXSWIG for lunar mineralogical investigation. In addition, LUMIS provides a new, important, ultraviolet spectral mapping, high-spatial-resolution line scan camera, and multispectral camera capabilities. An instrument configuration optimized for spectral mapping and imaging of the lunar surface and provide spectral results in support of the instrument design are described.

  15. An interchangeable scanning Hall probe/scanning SQUID microscope.

    Science.gov (United States)

    Tang, Chiu-Chun; Lin, Hui-Ting; Wu, Sing-Lin; Chen, Tse-Jun; Wang, M J; Ling, D C; Chi, C C; Chen, Jeng-Chung

    2014-08-01

    We have constructed a scanning probe microscope for magnetic imaging, which can function as a scanning Hall probe microscope (SHPM) and as a scanning SQUID microscope (SSM). The scanning scheme, applicable to SHPM and SSM, consists of a mechanical positioning (sub) micron-XY stage and a flexible direct contact to the sample without a feedback control system for the Z-axis. With the interchangeable capability of operating two distinct scanning modes, our microscope can incorporate the advantageous functionalities of the SHPM and SSM with large scan range up to millimeter, high spatial resolution (⩽4 μm), and high field sensitivity in a wide range of temperature (4.2 K-300 K) and magnetic field (10(-7) T-1 T). To demonstrate the capabilities of the system, we present magnetic images scanned with SHPM and SSM, including a RbFeB magnet and a nickel grid pattern at room temperature, surface magnetic domain structures of a La(2/3)Ca(1/3)MnO3 thin film at 77 K, and superconducting vortices in a striped niobium film at 4.2 K.

  16. QTL IciMapping: Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations

    Directory of Open Access Journals (Sweden)

    Lei Meng

    2015-06-01

    Full Text Available QTL IciMapping is freely available public software capable of building high-density linkage maps and mapping quantitative trait loci (QTL in biparental populations. Eight functionalities are integrated in this software package: (1 BIN: binning of redundant markers; (2 MAP: construction of linkage maps in biparental populations; (3 CMP: consensus map construction from multiple linkage maps sharing common markers; (4 SDL: mapping of segregation distortion loci; (5 BIP: mapping of additive, dominant, and digenic epistasis genes; (6 MET: QTL-by-environment interaction analysis; (7 CSL: mapping of additive and digenic epistasis genes with chromosome segment substitution lines; and (8 NAM: QTL mapping in NAM populations. Input files can be arranged in plain text, MS Excel 2003, or MS Excel 2007 formats. Output files have the same prefix name as the input but with different extensions. As examples, there are two output files in BIN, one for summarizing the identified bin groups and deleted markers in each bin, and the other for using the MAP functionality. Eight output files are generated by MAP, including summary of the completed linkage maps, Mendelian ratio test of individual markers, estimates of recombination frequencies, LOD scores, and genetic distances, and the input files for using the BIP, SDL, and MET functionalities. More than 30 output files are generated by BIP, including results at all scanning positions, identified QTL, permutation tests, and detection powers for up to six mapping methods. Three supplementary tools have also been developed to display completed genetic linkage maps, to estimate recombination frequency between two loci, and to perform analysis of variance for multi-environmental trials.

  17. QTL IciMapping:Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations

    Institute of Scientific and Technical Information of China (English)

    Lei; Meng; Huihui; Li; Luyan; Zhang; Jiankang; Wang

    2015-01-01

    QTL Ici Mapping is freely available public software capable of building high-density linkage maps and mapping quantitative trait loci(QTL) in biparental populations. Eight functionalities are integrated in this software package:(1) BIN: binning of redundant markers;(2) MAP: construction of linkage maps in biparental populations;(3) CMP: consensus map construction from multiple linkage maps sharing common markers;(4) SDL: mapping of segregation distortion loci;(5) BIP: mapping of additive, dominant, and digenic epistasis genes;(6) MET: QTL-by-environment interaction analysis;(7) CSL: mapping of additive and digenic epistasis genes with chromosome segment substitution lines; and(8) NAM: QTL mapping in NAM populations. Input files can be arranged in plain text, MS Excel 2003, or MS Excel 2007 formats. Output files have the same prefix name as the input but with different extensions. As examples, there are two output files in BIN, one for summarizing the identified bin groups and deleted markers in each bin, and the other for using the MAP functionality. Eight output files are generated by MAP, including summary of the completed linkage maps, Mendelian ratio test of individual markers, estimates of recombination frequencies, LOD scores, and genetic distances, and the input files for using the BIP, SDL,and MET functionalities. More than 30 output files are generated by BIP, including results at all scanning positions, identified QTL, permutation tests, and detection powers for up to six mapping methods. Three supplementary tools have also been developed to display completed genetic linkage maps, to estimate recombination frequency between two loci,and to perform analysis of variance for multi-environmental trials.

  18. QTL IciMapping:Integrated software for genetic linkage map construction and quantitative trait locus mapping in biparental populations

    Institute of Scientific and Technical Information of China (English)

    Lei Meng; Huihui Li; Luyan Zhang; Jiankang Wang

    2015-01-01

    QTL IciMapping is freely available public software capable of building high-density linkage maps and mapping quantitative trait loci (QTL) in biparental populations. Eight func-tionalities are integrated in this software package: (1) BIN:binning of redundant markers;(2) MAP: construction of linkage maps in biparental populations; (3) CMP: consensus map construction from multiple linkage maps sharing common markers; (4) SDL: mapping of segregation distortion loci;(5) BIP:mapping of additive, dominant, and digenic epistasis genes;(6) MET:QTL-by-environment interaction analysis;(7) CSL:mapping of additive and digenic epistasis genes with chromosome segment substitution lines; and (8) NAM: QTL mapping in NAM populations. Input files can be arranged in plain text, MS Excel 2003, or MS Excel 2007 formats. Output files have the same prefix name as the input but with different extensions. As examples, there are two output files in BIN, one for summarizing the identified bin groups and deleted markers in each bin, and the other for using the MAP functionality. Eight output files are generated by MAP, including summary of the completed linkage maps, Mendelian ratio test of individual markers, estimates of recombination frequencies, LOD scores, and genetic distances, and the input files for using the BIP, SDL, and MET functionalities. More than 30 output files are generated by BIP, including results at all scanning positions, identified QTL, permutation tests, and detection powers for up to six mapping methods. Three supplementary tools have also been developed to display completed genetic linkage maps, to estimate recombination frequency between two loci, and to perform analysis of variance for multi-environmental trials.

  19. Harvesting geographic features from heterogeneous raster maps

    Science.gov (United States)

    Chiang, Yao-Yi

    2010-11-01

    Raster maps offer a great deal of geospatial information and are easily accessible compared to other geospatial data. However, harvesting geographic features locked in heterogeneous raster maps to obtain the geospatial information is challenging. This is because of the varying image quality of raster maps (e.g., scanned maps with poor image quality and computer-generated maps with good image quality), the overlapping geographic features in maps, and the typical lack of metadata (e.g., map geocoordinates, map source, and original vector data). Previous work on map processing is typically limited to a specific type of map and often relies on intensive manual work. In contrast, this thesis investigates a general approach that does not rely on any prior knowledge and requires minimal user effort to process heterogeneous raster maps. This approach includes automatic and supervised techniques to process raster maps for separating individual layers of geographic features from the maps and recognizing geographic features in the separated layers (i.e., detecting road intersections, generating and vectorizing road geometry, and recognizing text labels). The automatic technique eliminates user intervention by exploiting common map properties of how road lines and text labels are drawn in raster maps. For example, the road lines are elongated linear objects and the characters are small connected-objects. The supervised technique utilizes labels of road and text areas to handle complex raster maps, or maps with poor image quality, and can process a variety of raster maps with minimal user input. The results show that the general approach can handle raster maps with varying map complexity, color usage, and image quality. By matching extracted road intersections to another geospatial dataset, we can identify the geocoordinates of a raster map and further align the raster map, separated feature layers from the map, and recognized features from the layers with the geospatial

  20. The genetic population structure of northern Sweden and its implications for mapping genetic diseases.

    Science.gov (United States)

    Einarsdottir, Elisabet; Egerbladh, Inez; Beckman, Lars; Holmberg, Dan; Escher, Stefan A

    2007-11-01

    The northern Swedish population has a history of admixture of three ethnic groups and a dramatic population growth from a relatively small founder population. This has resulted in founder effects that together with unique resources for genealogical analyses provide excellent conditions for genetic mapping of monogenic diseases. Several recent examples of successful mapping of genetic factors underlying susceptibility to complex diseases have suggested that the population of northern Sweden may also be an important tool for efficient mapping of more complex phenotypes. A potential factor contributing to these effects may be population sub-isolates within the large river valleys, constituting a central geographic characteristic of this region. We here provide evidence that marriage patterns as well as the distribution of gene frequencies in a set of marker loci are compatible with this notion. The possible implications of this population structure on linkage- and association based strategies for identifying genes contributing risk to complex diseases are discussed.

  1. Mole Mapping.

    Science.gov (United States)

    Crippen, Kent J.; Curtright, Robert D.; Brooks, David W.

    2000-01-01

    The abstract nature of the mole and its applications to problem solving make learning the concept difficult for students, and teaching the concept challenging for teachers. Presents activities that use concept maps and graphing calculators as tools for solving mole problems. (ASK)

  2. Projective mapping

    DEFF Research Database (Denmark)

    Dehlholm, Christian; Brockhoff, Per B.; Bredie, Wender Laurentius Petrus

    2012-01-01

    Projective Mapping (Risvik et.al., 1994) and its Napping (Pagès, 2003) variations have become increasingly popular in the sensory field for rapid collection of spontaneous product perceptions. It has been applied in variations which sometimes are caused by the purpose of the analysis and sometime...

  3. Participatory maps

    DEFF Research Database (Denmark)

    Salovaara-Moring, Inka

    looks at computer-assisted cartography as part of environmental knowledge production. It uses InfoAmazonia, the databased platform on Amazon rainforests, as an example of affective geo-visualization within information mapping that enhances embodiment in the experience of the information. Amazonia...

  4. EFFECTS OF GREEN MACROALGAE ON CLASSIFICATION OF SEAGRASS IN SIDE SCAN SONAR IMAGERY

    Science.gov (United States)

    High resolution maps of seagrass beds are useful for monitoring estuarine condition, managing fish habitats, and modeling estuarine processes. Side scan sonar (SSS) is one method for producing spatially accurate seagrass maps, although it has not been used widely. Our team rece...

  5. Studies on the compressibility of wax matrix granules of acetaminophen and their admixtures with various tableting bases.

    Science.gov (United States)

    Uhumwangho, M U; Okor, R S

    2006-04-01

    Matrix granules of acetaminophen have been formed by a melt granulation process whereby the acetaminophen powder was triturated with the melted wax--goat wax, glyceryl monostearate or carnuba wax. The compressibility of the matrix granules and their admixture, with diluent granules (lactose, alpha-cellulose or microcrystalline cellulose) was investigated. The granules were compressed to tablets at a constant load (30 arbitrary units on the load scale) of a manesty single punch machine. Resulting tablets were evaluated for tensile strength (T) and disintegration times (DT). Granule flow was determined by measuring their angle of repose when allowed to fall freely on a level surface. Matrix granules prepared by melt granulation with goat wax or glyceryl monostearate were too sticky and therefore did not flow at all. They were also poorly compressible (T values = 0.20MN/m2). Inclusion of the diluent remarkably improved granule flow property and compressibility. The T values of the tablets (measure of compressibility) increased from about 0.24 to 0.65 MN/m2 during increase in diluent (lactose) content from 20 to 80 %w/w. Microcrystalline cellulose and alpha-cellulose were more effective than lactose in promoting compressibility of the granules. By contrast the matrix granules formed with carnuba wax were free flowing (angle of repose, 18.60). Addition of the diluent further improved flowability slightly. The matrix granules (without a diluent) were readily compressible (T value, 1.79MN/m2). Addition of the diluent (80%w/w) reduced T values (MN/m2) slightly to 1.32 (lactose), 1.48 (alpha-cellulose) and 1.74 (microcrystalline cellulose). Tablets of the matrix granules only, disintegrated rapidly within 3 minutes. DT was further reduced to wax proved most promising in the melt granulation of the test drug for sustained release applications.

  6. Development of a Panel of Genome-Wide Ancestry Informative Markers to Study Admixture Throughout the Americas

    Science.gov (United States)

    Galanter, Joshua Mark; Fernandez-Lopez, Juan Carlos; Gignoux, Christopher R.; Barnholtz-Sloan, Jill; Fernandez-Rozadilla, Ceres; Via, Marc; Hidalgo-Miranda, Alfredo; Contreras, Alejandra V.; Figueroa, Laura Uribe; Raska, Paola; Jimenez-Sanchez, Gerardo; Silva Zolezzi, Irma; Torres, Maria; Ponte, Clara Ruiz; Ruiz, Yarimar; Salas, Antonio; Nguyen, Elizabeth; Eng, Celeste; Borjas, Lisbeth; Zabala, William; Barreto, Guillermo; Rondón González, Fernando; Ibarra, Adriana; Taboada, Patricia; Porras, Liliana; Moreno, Fabián; Bigham, Abigail; Gutierrez, Gerardo; Brutsaert, Tom; León-Velarde, Fabiola; Moore, Lorna G.; Vargas, Enrique; Cruz, Miguel; Escobedo, Jorge; Rodriguez-Santana, José; Rodriguez-Cintrón, William; Chapela, Rocio; Ford, Jean G.; Bustamante, Carlos; Seminara, Daniela; Shriver, Mark; Ziv, Elad; Gonzalez Burchard, Esteban; Haile, Robert

    2012-01-01

    Most individuals throughout the Americas are admixed descendants of Native American, European, and African ancestors. Complex historical factors have resulted in varying proportions of ancestral contributions between individuals within and among ethnic groups. We developed a panel of 446 ancestry informative markers (AIMs) optimized to estimate ancestral proportions in individuals and populations throughout Latin America. We used genome-wide data from 953 individuals from diverse African, European, and Native American populations to select AIMs optimized for each of the three main continental populations that form the basis of modern Latin American populations. We selected markers on the basis of locus-specific branch length to be informative, well distributed throughout the genome, capable of being genotyped on widely available commercial platforms, and applicable throughout the Americas by minimizing within-continent heterogeneity. We then validated the panel in samples from four admixed populations by comparing ancestry estimates based on the AIMs panel to estimates based on genome-wide association study (GWAS) data. The panel provided balanced discriminatory power among the three ancestral populations and accurate estimates of individual ancestry proportions (R2>0.9 for ancestral components with significant between-subject variance). Finally, we genotyped samples from 18 populations from Latin America using the AIMs panel and estimated variability in ancestry within and between these populations. This panel and its reference genotype information will be useful resources to explore population history of admixture in Latin America and to correct for the potential effects of population stratification in admixed samples in the region. PMID:22412386

  7. Chlamydiaceae Genomics Reveals Interspecies Admixture and the Recent Evolution of Chlamydia abortus Infecting Lower Mammalian Species and Humans.

    Science.gov (United States)

    Joseph, Sandeep J; Marti, Hanna; Didelot, Xavier; Castillo-Ramirez, Santiago; Read, Timothy D; Dean, Deborah

    2015-10-27

    Chlamydiaceae are obligate intracellular bacteria that cause a diversity of severe infections among humans and livestock on a global scale. Identification of new species since 1989 and emergence of zoonotic infections, including abortion in women, underscore the need for genome sequencing of multiple strains of each species to advance our knowledge of evolutionary dynamics across Chlamydiaceae. Here, we genome sequenced isolates from avian, lower mammalian and human hosts. Based on core gene phylogeny, five isolates previously classified as Chlamydia abortus were identified as members of Chlamydia psittaci and Chlamydia pecorum. Chlamydia abortus is the most recently emerged species and is a highly monomorphic group that lacks the conserved virulence-associated plasmid. Low-level recombination and evidence for adaptation to the placenta echo evolutionary processes seen in recently emerged, highly virulent niche-restricted pathogens, such as Bacillus anthracis. In contrast, gene flow occurred within C. psittaci and other Chlamydiaceae species. The C. psittaci strain RTH, isolated from a red-tailed hawk (Buteo jamaicensis), is an outlying strain with admixture of C. abortus, C. psittaci, and its own population markers. An average nucleotide identity of less than 94% compared with other Chlamydiaceae species suggests that RTH belongs to a new species intermediary between C. psittaci and C. abortus. Hawks, as scavengers and predators, have extensive opportunities to acquire multiple species in their intestinal tract. This could facilitate transformation and homologous recombination with the potential for new species emergence. Our findings indicate that incubator hosts such as birds-of-prey likely promote Chlamydiaceae evolution resulting in novel pathogenic lineages.

  8. Development of a panel of genome-wide ancestry informative markers to study admixture throughout the Americas.

    Directory of Open Access Journals (Sweden)

    Joshua Mark Galanter

    Full Text Available Most individuals throughout the Americas are admixed descendants of Native American, European, and African ancestors. Complex historical factors have resulted in varying proportions of ancestral contributions between individuals within and among ethnic groups. We developed a panel of 446 ancestry informative markers (AIMs optimized to estimate ancestral proportions in individuals and populations throughout Latin America. We used genome-wide data from 953 individuals from diverse African, European, and Native American populations to select AIMs optimized for each of the three main continental populations that form the basis of modern Latin American populations. We selected markers on the basis of locus-specific branch length to be informative, well distributed throughout the genome, capable of being genotyped on widely available commercial platforms, and applicable throughout the Americas by minimizing within-continent heterogeneity. We then validated the panel in samples from four admixed populations by comparing ancestry estimates based on the AIMs panel to estimates based on genome-wide association study (GWAS data. The panel provided balanced discriminatory power among the three ancestral populations and accurate estimates of individual ancestry proportions (R² > 0.9 for ancestral components with significant between-subject variance. Finally, we genotyped samples from 18 populations from Latin America using the AIMs panel and estimated variability in ancestry within and between these populations. This panel and its reference genotype information will be useful resources to explore population history of admixture in Latin America and to correct for the potential effects of population stratification in admixed samples in the region.

  9. Admixture and genetic relationships of Mexican Mestizos regarding Latin American and Caribbean populations based on 13 CODIS-STRs.

    Science.gov (United States)

    Salazar-Flores, J; Zuñiga-Chiquette, F; Rubi-Castellanos, R; Álvarez-Miranda, J L; Zetina-Hérnandez, A; Martínez-Sevilla, V M; González-Andrade, F; Corach, D; Vullo, C; Álvarez, J C; Lorente, J A; Sánchez-Diz, P; Herrera, R J; Cerda-Flores, R M; Muñoz-Valle, J F; Rangel-Villalobos, H

    2015-02-01

    Short tandem repeats (STRs) of the combined DNA index system (CODIS) are probably the most employed markers for human identification purposes. STR databases generated to interpret DNA profiles are also helpful for anthropological purposes. In this work, we report admixture, population structure, and genetic relationships of Mexican Mestizos with respect to Latin American and Caribbean populations based on 13 CODIS-STRs. In addition, new STR population data were included from Tijuana, Baja California (Northwest, Mexico), which represents an interesting case of elevated genetic flow as a bordering city with the USA. Inter-population analyses included CODIS-STR data from 11 Mexican Mestizo, 12 Latin American and four Caribbean populations, in addition to European, Amerindian, and African genetic pools as ancestral references. We report allele frequencies and statistical parameters of forensic interest (PD, PE, Het, PIC, typical PI), for 15 STRs in Tijuana, Baja California. This Mexican border city was peculiar by the increase of African ancestry, and by presenting three STRs in Hardy-Weinberg disequilibrium, probably explained by recurrent gene flow. The Amerindian ancestry in Central and Southeast of Mexico was the greatest in Latin America (50.9-68.6%), only comparable with the North of Central America and Ecuador (48.8-56.4%), whereas the European ancestry was prevalent in South America (66.7-75%). The African ancestry in Mexico was the smallest (2.2-6.3%) in Latin America (≥ 2.6%), particularly regarding Brazil (21%), Honduras (62%), and the Caribbean (43.2-65.2%). CODIS-STRs allowed detecting significant population structure in Latin America based on greater presence of European, Amerindian, and African ancestries in Central/South America, Mexican Mestizos, and the Caribbean, respectively.

  10. Retention of low-fitness genotypes over six decades of admixture between native and introduced tiger salamanders

    Directory of Open Access Journals (Sweden)

    Shaffer H Bradley

    2010-05-01

    Full Text Available Abstract Background Introductions of non-native tiger salamanders into the range of California tiger salamanders have provided a rare opportunity to study the early stages of secondary contact and hybridization. We produced first- and second-generation hybrid salamanders in the lab and measured viability among these early-generation hybrid crosses to determine the strength of the initial barrier to gene exchange. We also created contemporary-generation hybrids in the lab and evaluated the extent to which selection has affected fitness over approximately 20 generations of admixture. Additionally, we examined the inheritance of quantitative phenotypic variation to better understand how evolution has progressed since secondary contact. Results We found significant variation in the fitness of hybrids, with non-native backcrosses experiencing the highest survival and F2 hybrids the lowest. Contemporary-generation hybrids had similar survival to that of F2 families, contrary to our expectation that 20 generations of selection in the wild would eliminate unfit genotypes and increase survival. Hybrid survival clearly exhibited effects of epistasis, whereas size and growth showed mostly additive genetic variance, and time to metamorphosis showed substantial dominance. Conclusions Based on first- and second- generation cross types, our results suggest that the initial barrier to gene flow between these two species was relatively weak, and subsequent evolution has been generally slow. The persistence of low-viability recombinant hybrid genotypes in some contemporary populations illustrates that while hybridization can provide a potent source of genetic variation upon which natural selection can act, the sorting of fit from unfit gene combinations might be inefficient in highly admixed populations. Spatio-temporal fluctuation in selection or complex genetics has perhaps stalled adaptive evolution in this system despite selection for admixed genotypes within

  11. Re-scan confocal microscopy: scanning twice for better resolution.

    Science.gov (United States)

    De Luca, Giulia M R; Breedijk, Ronald M P; Brandt, Rick A J; Zeelenberg, Christiaan H C; de Jong, Babette E; Timmermans, Wendy; Azar, Leila Nahidi; Hoebe, Ron A; Stallinga, Sjoerd; Manders, Erik M M

    2013-01-01

    We present a new super-resolution technique, Re-scan Confocal Microscopy (RCM), based on standard confocal microscopy extended with an optical (re-scanning) unit that projects the image directly on a CCD-camera. This new microscope has improved lateral resolution and strongly improved sensitivity while maintaining the sectioning capability of a standard confocal microscope. This simple technology is typically useful for biological applications where the combination high-resolution and high-sensitivity is required.

  12. Lidar arc scan uncertainty reduction through scanning geometry optimization

    Directory of Open Access Journals (Sweden)

    H. Wang

    2015-10-01

    Full Text Available Doppler lidars are frequently operated in a mode referred to as arc scans, wherein the lidar beam scans across a sector with a fixed elevation angle and the resulting measurements are used to derive an estimate of the n minute horizontal mean wind velocity (speed and direction. Previous studies have shown that the uncertainty in the measured wind speed originates from turbulent wind fluctuations and depends on the scan geometry (the arc span and the arc orientation. This paper is designed to provide guidance on optimal scan geometries for two key applications in the wind energy industry: wind turbine power performance analysis and annual energy production. We present a quantitative analysis of the retrieved wind speed uncertainty derived using a theoretical model with the assumption of isotropic and frozen turbulence, and observations from three sites that are onshore with flat terrain, onshore with complex terrain and offshore, respectively. The results from both the theoretical model and observations show that the uncertainty is scaled with the turbulence intensity such that the relative standard error on the 10 min mean wind speed is about 30 % of the turbulence intensity. The uncertainty in both retrieved wind speeds and derived wind energy production estimates can be reduced by aligning lidar beams with the dominant wind direction, increasing the arc span and lowering the number of beams per arc scan. Large arc spans should be used at sites with high turbulence intensity and/or large wind direction variation when arc scans are used for wind resource assessment.

  13. Participatory mapping new data, new cartography

    CERN Document Server

    Plantin, Jean-Christophe

    2014-01-01

    This book is intended for applications of online digital mapping, called mashups (or composite application), and to analyze the mapping practices in online socio-technical controversies. The hypothesis put forward is that the ability to create an online map accompanies the formation of online audience and provides support for a position in a debate on the Web.The first part provides a study of the map: - a combination of map and statistical reason- crosses between map theories and CIS theories- recent developments in scanning the map, from Geographic Information Systems (GIS) to Web map.The second part is based on a corpus of twenty "mashup" maps, and offers a techno-semiotic analysis highlighting the "thickness of the mediation" they are in a process of communication on the Web. Map as a device to "make do" is thus replaced through these stages of creation, ranging from digital data in their viewing, before describing the construction of the map as a tool for visual evidence in public debates, and ending wit...

  14. Application of scanning microdensitometer data in selected plant science case studies

    Science.gov (United States)

    Lillesand, T. M.; Meisner, D. E.

    1981-01-01

    This paper treats a representative sample of projects aimed at vegetation mapping and assessment via analysis of both digital photographic and Landsat data projects and illustrates the potential for using scanning microdensitometric data extracted from color infrared photographs in the following applications: freshwater wetlands mapping, tree type mapping, and yield vs. reflectance modeling in corn fertilization experiments. These case studies are presented to illustrate the general applicability of scanning microdensitometer data in the contexts of image classification and enhancement as well as quantitative modeling of ground parameters.

  15. MAPPING INNOVATION

    DEFF Research Database (Denmark)

    Thuesen, Christian Langhoff; Koch, Christian

    2011-01-01

    By adopting a theoretical framework from strategic niche management research (SNM) this paper presents an analysis of the innovation system of the Danish Construction industry. The analysis shows a multifaceted landscape of innovation around an existing regime, built around existing ways of working...... and developed over generations. The regime is challenged from various niches and the socio-technical landscape through trends as globalization. Three niches (Lean Construction, BIM and System Deliveries) are subject to a detailed analysis showing partly incompatible rationales and various degrees of innovation...... potential. The paper further discusses how existing policymaking operates in a number of tensions one being between government and governance. Based on the concepts from SNM the paper introduces an innovation map in order to support the development of meta-governance policymaking. By mapping some...

  16. Mapping filmmaking

    DEFF Research Database (Denmark)

    Gilje, Øystein; Frølunde, Lisbeth; Lindstrand, Fredrik

    2010-01-01

    This chapter concerns mapping patterns in regards to how young filmmakers (age 15 – 20) in the Scandinavian countries learn about filmmaking. To uncover the patterns, we present portraits of four young filmmakers who participated in the Scandinavian research project Making a filmmaker. The focus ...... is on their learning practices and how they create ‘learning paths’ in relation to resources in diverse learning contexts, whether formal, non-formal and informal contexts.......This chapter concerns mapping patterns in regards to how young filmmakers (age 15 – 20) in the Scandinavian countries learn about filmmaking. To uncover the patterns, we present portraits of four young filmmakers who participated in the Scandinavian research project Making a filmmaker. The focus...

  17. Mobile Laser Scanning for Indoor Modelling

    Science.gov (United States)

    Thomson, C.; Apostolopoulos, G.; Backes, D.; Boehm, J.

    2013-10-01

    The process of capturing and modelling buildings has gained increased focus in recent years with the rise of Building Information Modelling (BIM). At the heart of BIM is a process change for the construction and facilities management industries whereby a BIM aids more collaborative working through better information exchange, and as a part of the process Geomatic/Land Surveyors are not immune from the changes. Terrestrial laser scanning has been proscribed as the preferred method for rapidly capturing buildings for BIM geometry. This is a process change from a traditional measured building survey just with a total station and is aided by the increasing acceptance of point cloud data being integrated with parametric building models in BIM tools such as Autodesk Revit or Bentley Architecture. Pilot projects carried out previously by the authors to investigate the geometry capture and modelling of BIM confirmed the view of others that the process of data capture with static laser scan setups is slow and very involved requiring at least two people for efficiency. Indoor Mobile Mapping Systems (IMMS) present a possible solution to these issues especially in time saved. Therefore this paper investigates their application as a capture device for BIM geometry creation over traditional static methods through a fit-for-purpose test.

  18. Scanning Gate Spectroscopy on Nanoclusters

    OpenAIRE

    Gurevich, L.; Canali, L.; Kouwenhoven, L.P.

    1999-01-01

    A gated probe for scanning tunnelling microscopy (STM) has been developed. The probe extends normal STM operations by means of an additional electrode fabricated next to the tunnelling tip. The extra electrode does not make contact with the sample and can be used as a gate. We report on the recipe used for fabricating the tunnelling tip and the gate electrode on a silicon nitride cantilever. We demonstrate the functioning of the scanning gate probes by performing single-electron tunnelling sp...

  19. Electrostatic ion beam scanning system

    Energy Technology Data Exchange (ETDEWEB)

    Harper, G.C.; Curtis, W.D.

    1978-04-01

    An electrostatic scanning system has been designed and built to uniformly implant a 1 cm/sup 2/ sample with a charged particle beam. The full angular scan capability for a 2 MeV beam is 0.5 degrees at 6 kV p-p. The design of the system is extremely simple so it is very compact, easy to operate, and has shown very good reliability.

  20. The LandScan Global Population Distribution Project: Current State of the Art and Prospective Innovation

    Energy Technology Data Exchange (ETDEWEB)

    Rose, Amy N [ORNL; Bright, Eddie A [ORNL

    2014-01-01

    Advances in remote sensing, dasymetric mapping techniques, and the ever-increasing availability of spatial datasets have enhanced global human population distribution databases. These datasets demonstrate an enormous improvement over the conventional use of choropleth maps to represent population distribution and are vital for analysis and planning purposes including humanitarian response, disease mapping, risk analysis, and evacuation modeling. Dasymetric mapping techniques have been employed to address spatial mismatch, but also to develop finer resolution population distributions in areas of the world where subnational census data are coarse or non-existent. One such implementation is the LandScan Global model which provides a 30 arc-second global population distribution based on ancillary datasets such as land cover, slope, proximity to roads, and settlement locations. This work will review the current state of the LandScan model, future innovations aimed at increasing spatial and demographic resolution, and situate LandScan within the landscape of other global population distribution datasets.

  1. Infrared studies of molecular shocks in the supernova remnant HB 21: II. Thermal admixture of shocked H2 gas in the south

    Science.gov (United States)

    Shinn, Jong-Ho; Koo, Bon-Chul; Burton, Michael; Lee, Ho-Gyu; Moon, Dae-Sik

    2010-02-01

    We present near- and mid-infrared observations on the shock-cloud interaction region in the southern part of the supernova remnant HB 21, performed with the InfraRed Camera (IRC) aboard AKARI satellite and the Wide InfraRed Camera (WIRC) at the Palomar 5 m telescope. The IRC 4 μm (N4), 7 μm (S7), and 11 μm (S11) band images and the WIRC Hυ=1→0S(1) 2.12 μm image show similar diffuse features, around a shocked CO cloud. We analyzed the emission through comparison with the H2 line emission of several shock models. The IRC colors are well explained by the thermal admixture model of H2 gas - whose infinitesimal H2 column density has a power-law relation with the temperature T, dN˜T-dT - with n(H)˜3.9×104cm-3,b˜4.2, and N(H;T>100K)˜2.8×1021cm-2. We interpreted these parameters with several different pictures of the shock-cloud interactions - multiple planar C-shocks, bow shocks, and shocked clumps - and discussed their weaknesses and strengths. The observed Hυ=1→0S(1) intensity is four times greater than the prediction from the power-law admixture model, the same tendency as found in the northern part of HB 21 (Paper I). We also explored the limitation of the thermal admixture model with respect to the derived model parameters.

  2. Application of satellite infrared measurements to mapping sea ice

    Science.gov (United States)

    Barnes, J. C.

    1972-01-01

    The application of the ITOS-SR (scanning radiometer) infrared measurements for mapping sea ice was examined. The work included detailed mapping of ice features visible in the ITOS nighttime DRSR (direct readout scanning radiometer) pictorial data and in Nimbus summertime film strip data. Analyses of digital temperature values from computer printouts of ITOS stored data and from Nimbus data listings were also undertaken, and densitometric measurements of both ITOS and Nimbus data were initiated.

  3. Parameterization of light scattering for solving the inverse problem of determining the concentrations of the principal light scattering and absorbing admixtures in shelf waters

    Directory of Open Access Journals (Sweden)

    Vadim N. Pelevin

    2001-12-01

    Full Text Available A method for estimating the water backscattering coefficient was put forward on the basis of experimental data of diffuse attenuation coefficient for downwelling irradiance and irradiance reflectance. Calculations were carried out for open sea waters of different types and the spectral dependencies were found ("anomalous" spectra and explained. On this basis, a new model of light backscattering on particles in the sea is proposed. This model may be useful for modelling remote sensing reflectance spectra in order to solve the inverse problems of estimating the concentration of natural admixtures in shelf waters.

  4. “路宝”高模量外掺剂的性能及应用%Performance and Application of "Lubao" High Modulus Admixture

    Institute of Scientific and Technical Information of China (English)

    赵冬明

    2012-01-01

    介绍了“路宝”高模量外掺剂的原材料、生产工艺、技术指标,阐述了“路宝”高模量沥青混合料的性能及应用情况,对其经济效益和社会效益进行了分析。%Raw material, production technology and technical indexes of "Lubao" high modulus admixture are introduced. The performance and application of "Lubao" high modulus asphalt mixture are elaborated and its eco- nomic benefits and social benefits are analyzed.

  5. Microanalysis of dental caries using laser-scanned fluorescence

    Science.gov (United States)

    Barron, Joseph R.; Paton, Barry E.; Zakariasen, Kenneth L.

    1992-06-01

    It is well known that enamel and dentin fluoresce when illuminated by short-wavelength optical radiation. Fluorescence emission from carious and non-carious regions of teeth have been studied using a new experimental scanning technique for fluorescence analysis of dental sections. Scanning in 2 dimensions will allow surface maps of dental caries to be created. These surface images are then enhanced using the conventional and newer image processing techniques. Carious regions can be readily identified and contour maps can be used to graphically display the degree of damage on both surfaces and transverse sections. Numerous studies have shown that carious fluorescence is significantly different than non-carious regions. The scanning laser fluorescence spectrometer focuses light from a 25 mW He-Cd laser at 442 nm through an objective lens onto a cross-section area as small as 3 micrometers in diameter. Microtome prepared dental samples 100 micrometers thick are laid flat onto an optical bench perpendicular to the incident beam. The sample is moved under computer control in X & Y with an absolute precision of 0.1 micrometers . The backscattered light is both spatial and wavelength filtered before being measured on a long wavelength sensitized photomultiplier tube. High precision analysis of dental samples allow detailed maps of carious regions to be determined. Successive images allow time studies of caries growth and even the potential for remineralization studies of decalcified regions.

  6. Analytical scanning evanescent microwave microscope and control stage

    Science.gov (United States)

    Xiang, Xiao-Dong; Gao, Chen; Duewer, Fred; Yang, Hai Tao; Lu, Yalin

    2009-06-23

    A scanning evanescent microwave microscope (SEMM) that uses near-field evanescent electromagnetic waves to probe sample properties is disclosed. The SEMM is capable of high resolution imaging and quantitative measurements of the electrical properties of the sample. The SEMM has the ability to map dielectric constant, loss tangent, conductivity, electrical impedance, and other electrical parameters of materials. Such properties are then used to provide distance control over a wide range, from to microns to nanometers, over dielectric and conductive samples for a scanned evanescent microwave probe, which enable quantitative non-contact and submicron spatial resolution topographic and electrical impedance profiling of dielectric, nonlinear dielectric and conductive materials. The invention also allows quantitative estimation of microwave impedance using signals obtained by the scanned evanescent microwave probe and quasistatic approximation modeling. The SEMM can be used to measure electrical properties of both dielectric and electrically conducting materials.

  7. Characterization of Visual Scanning Patterns in Air Traffic Control

    Directory of Open Access Journals (Sweden)

    Sarah N. McClung

    2016-01-01

    Full Text Available Characterization of air traffic controllers’ (ATCs’ visual scanning strategies is a challenging issue due to the dynamic movement of multiple aircraft and increasing complexity of scanpaths (order of eye fixations and saccades over time. Additionally, terminologies and methods are lacking to accurately characterize the eye tracking data into simplified visual scanning strategies linguistically expressed by ATCs. As an intermediate step to automate the characterization classification process, we (1 defined and developed new concepts to systematically filter complex visual scanpaths into simpler and more manageable forms and (2 developed procedures to map visual scanpaths with linguistic inputs to reduce the human judgement bias during interrater agreement. The developed concepts and procedures were applied to investigating the visual scanpaths of expert ATCs using scenarios with different aircraft congestion levels. Furthermore, oculomotor trends were analyzed to identify the influence of aircraft congestion on scan time and number of comparisons among aircraft. The findings show that (1 the scanpaths filtered at the highest intensity led to more consistent mapping with the ATCs’ linguistic inputs, (2 the pattern classification occurrences differed between scenarios, and (3 increasing aircraft congestion caused increased scan times and aircraft pairwise comparisons. The results provide a foundation for better characterizing complex scanpaths in a dynamic task and automating the analysis process.

  8. Data-driven inference for the spatial scan statistic

    Directory of Open Access Journals (Sweden)

    Duczmal Luiz H

    2011-08-01

    Full Text Available Abstract Background Kulldorff's spatial scan statistic for aggregated area maps searches for clusters of cases without specifying their size (number of areas or geographic location in advance. Their statistical significance is tested while adjusting for the multiple testing inherent in such a procedure. However, as is shown in this work, this adjustment is not done in an even manner for all possible cluster sizes. Results A modification is proposed to the usual inference test of the spatial scan statistic, incorporating additional information about the size of the most likely cluster found. A new interpretation of the results of the spatial scan statistic is done, posing a modified inference question: what is the probability that the null hypothesis is rejected for the original observed cases map with a most likely cluster of size k, taking into account only those most likely clusters of size k found under null hypothesis for comparison? This question is especially important when the p-value computed by the usual inference process is near the alpha significance level, regarding the correctness of the decision based in this inference. Conclusions A practical procedure is provided to make more accurate inferences about the most likely cluster found by the spatial scan statistic.

  9. Interesting bone scans - unusual findings

    Energy Technology Data Exchange (ETDEWEB)

    Dobson, M.; Wadhwa, S.S.; Mansberg, R.; Fernandes, V.B. [Wollongong Hospital, Wollongong, NSW (Australia)

    1997-12-01

    A 59-year-old female with carcinoma of the colon and known liver metastatic disease was referred for bone scan to evaluate for bone metastases. Although no bone metastases were found, there was abnormal uptake noted in the liver corresponding to a metastatic calcified lesion. The only other findings were of degenerative disease in the cervical spine, right shoulder and small joints of the hands. A 69-year-old male with carcinoma of the prostate and right side low back pain was referred for bone scan. No focal abnormalities to suggest metastatic disease were identified; findings within the cervical spine, lumber spine and knees were presumed secondary to degenerative disease. Intermittent pain persisted and the patient was referred for a repeat bone scan six months later. Previous scan findings of degenerative disease and no metastatic disease were confirmed; however, closer inspection revealed an enlarged right kidney with significant retention of tracer in the pelvicalyceal system suggesting possible obstruction. A Retrograde pyelogram was performed, and no obvious obstruction demonstrated. As bone scan findings were very suggestive of obstruction, a DTPA scan with lasix was performed showing a dilated right collecting system with no functional obstruction. Given the degree of dilation, it is possible that the patient experiences intermittent PUJ obstruction causing his symptoms. A 33-year-old male with insulin dependent diabetes mellitus and viral arthritis was referred for a bone scan. A three phase revealed increased uptake in the region of the knee and leR proximal tibia. Delayed whole body images revealed multiple focal areas of osteoblastic activity in the leR tibia. Abnormal uptake was also seen in the upper third of the leR femur. The remainder of the skeletal survey was normal. X-ray correlation of the leR tibia and femoral findings was undertaken. Combinating unilateral changes on bone scan and X-ray although very suggestive of sclerotic polyostotic

  10. A resonant scanning dipole-antenna probe for enhanced nanoscale imaging.

    Science.gov (United States)

    Neumann, Lars; van 't Oever, Jorick; van Hulst, Niek F

    2013-11-13

    We present a scanning antenna probe that provides 35 nm optical hotspots with a 16-fold excitation enhancement. A resonant optical antenna, tuned to operation in the visible, is carved into the aluminum-coated scanning probe. The antenna resonances, field localization, excitation, and polarization response are probed in the near-field by scanning over single fluorescent nanobeads. At the same time, the distance-dependent coupling of the emission to the antenna mode is mapped. Good agreement with theory is obtained. The presented scanning antenna approach is useful for both nanoscale plasmonic mode imaging and (bio)imaging.

  11. The boundary-scan handbook

    CERN Document Server

    Parker, Kenneth P

    2016-01-01

    Aimed at electronics industry professionals, this 4th edition of the Boundary Scan Handbook describes recent changes to the IEEE1149.1 Standard Test Access Port and Boundary-Scan Architecture. This updated edition features new chapters on the possible effects of the changes on the work of the practicing test engineers and the new 1149.8.1 standard. Anyone needing to understand the basics of boundary scan and its practical industrial implementation will need this book. Provides an overview of the recent changes to the 1149.1 standard and the effect of the changes on the work of test engineers;   Explains the new IEEE 1149.8.1 subsidiary standard and applications;   Describes the latest updates on the supplementary IEEE testing standards. In particular, addresses: IEEE Std 1149.1                      Digital Boundary-Scan IEEE Std 1149.4                      Analog Boundary-Scan IEEE Std 1149.6                      Advanced I/O Testing IEEE Std 1149.8.1           �...

  12. An Integrated Map of Soybean Physical Map and Genetic Map

    Institute of Scientific and Technical Information of China (English)

    QI Zhaoming; LI Hui; WU Qiong; SUN Yanan; LIU Chunyan; HU Guohua; CHEN Qingshan

    2009-01-01

    Soybean is a major crop in the world, and it is a main source of plant proteins and oil. A lot of soybean genetic maps and physical maps have been constructed, but there are no integrated map between soybean physical map and genetic map. In this study, soybean genome sequence data, released by JGI (US Department of Energy's Joint Genome Institute), had been downloaded. With the software Blast 2.2.16, a total of 161 super sequences were mapped on the soybean public genetic map to construct an integrated map. The length of these super sequences accounted for 73.08% of all the genome sequence. This integrated map could be used for gene cloning, gene mining, and comparative genome of legume.

  13. Mapping of

    Directory of Open Access Journals (Sweden)

    Sayed M. Arafat

    2014-06-01

    Full Text Available Land cover map of North Sinai was produced based on the FAO-Land Cover Classification System (LCCS of 2004. The standard FAO classification scheme provides a standardized system of classification that can be used to analyze spatial and temporal land cover variability in the study area. This approach also has the advantage of facilitating the integration of Sinai land cover mapping products to be included with the regional and global land cover datasets. The total study area is covering a total area of 20,310.4 km2 (203,104 hectare. The landscape classification was based on SPOT4 data acquired in 2011 using combined multispectral bands of 20 m spatial resolution. Geographic Information System (GIS was used to manipulate the attributed layers of classification in order to reach the maximum possible accuracy. GIS was also used to include all necessary information. The identified vegetative land cover classes of the study area are irrigated herbaceous crops, irrigated tree crops and rain fed tree crops. The non-vegetated land covers in the study area include bare rock, bare soils (stony, very stony and salt crusts, loose and shifting sands and sand dunes. The water bodies were classified as artificial perennial water bodies (fish ponds and irrigated canals and natural perennial water bodies as lakes (standing. The artificial surfaces include linear and non-linear features.

  14. Scanning probe microscopy competency development

    Energy Technology Data Exchange (ETDEWEB)

    Hawley, M.E.; Reagor, D.W.; Jia, Quan Xi [and others

    1998-12-31

    This is the final report of a three-year, Laboratory Directed Research and Development (LDRD) project at Los Alamos National Laboratory (LANL). The project collaborators developed an ultra-high vacuum scanning tunneling microscope (UHV-STM) capability, integrated it with existing scanning probe microscopes, and developed new, advanced air-based scanning force techniques (SPMs). Programmatic, basic, and industrially related laboratory research requires the existence of SPMs, as well as expertise capable of providing local nano-scale information. The UHV-STM capability, equipped with load-lock system and several surface science techniques, will allow introduction, examination, and reaction of surfaces prepared under well-controlled vacuum conditions, including the examination of morphology and local bonding associated with the initial stages of film growth under controlled growth conditions. The resulting capabilities will enable the authors to respond to a variety of problems requiring local characterization of conducting and nonconducting surfaces in liquids, air, and UHV.

  15. Nanobits: customizable scanning probe tips

    DEFF Research Database (Denmark)

    Kumar, Rajendra; Shaik, Hassan Uddin; Sardan Sukas, Özlem

    2009-01-01

    silicon processing. Using a microgripper they were detached from an array and fixed to a standard pyramidal AFM probe or alternatively inserted into a tipless cantilever equipped with a narrow slit. The nanobit-enhanced probes were used for imaging of deep trenches, without visible deformation, wear......We present here a proof-of-principle study of scanning probe tips defined by planar nanolithography and integrated with AFM probes using nanomanipulation. The so-called 'nanobits' are 2-4 mu m long and 120-150 nm thin flakes of Si3N4 or SiO2, fabricated by electron beam lithography and standard...... or dislocation of the tips of the nanobit after several scans. This approach allows an unprecedented freedom in adapting the shape and size of scanning probe tips to the surface topology or to the specific application....

  16. Scanning Terahertz Heterodyne Imaging Systems

    Science.gov (United States)

    Siegel, Peter; Dengler, Robert

    2007-01-01

    Scanning terahertz heterodyne imaging systems are now at an early stage of development. In a basic scanning terahertz heterodyne imaging system, (see Figure 1) two far-infrared lasers generate beams denoted the local-oscillator (LO) and signal that differ in frequency by an amount, denoted the intermediate frequency (IF), chosen to suit the application. The LO beam is sent directly to a mixer as one of two inputs. The signal beam is focused to a spot on or in the specimen. After transmission through or reflection from the specimen, the beams are focused to a spot on a terahertz mixer, which extracts the IF outputs. The specimen is mounted on a translation stage, by means of which the focal spot is scanned across the specimen to build up an image.

  17. Calculation of Uniform of Beam Scanning

    Institute of Scientific and Technical Information of China (English)

    2011-01-01

    For the electron beam application, it is always scanned by a dipole magnet. The uniform of the scanning has great influence for some application, such as the irradiation of the thyristor. There are two methods for improving the scanning uniform:

  18. Analysis for Producing a Facsimile of the Cadastral Map of Varaždin

    Directory of Open Access Journals (Sweden)

    Mirko Husak

    2012-12-01

    Full Text Available This paper investigates and suggests methods for producing a facsimile of the 1 860 cadastral map of Varaždin. The methods used to produce the map, the coordinate systems, map contents, usage, maintenance and damage are described. Three samples from the map that display the elements of damage noted were researched, and the possibility of replacing damaged sections with undamaged sections using digital methods investigated. The sources available were the original cadastral colour map of Varaždin, along with the line art cadastral map and field cadastral sketches. The original colour and line art maps were scanned using the DeSkan Express scanning system for large formats. A flatbed UMAX Mirage II A3 scanner was used for scanning the field cadastral map. For the research image-processing, Adobe Photoshop CE 7.0 software was used, although it was primarily designed for processing photographs. The colour separation method was rejected from the start, since the map was made by hand. The paper discusses the possibility of copying and inserting missing parts from additional map sources, changing the colour of the paper to white or another colour, removing the map content added in red ink and lead pencil, and so on. The discussion is based on actual examples from the digital image. The conclusion suggests image-processing methods for achieving optimal results in producing a facsimile of the Varaždin cadastral map.Keywords: facsimile; cadastral map; map content; scanning; digital image processing

  19. High precision prism scanning system

    Science.gov (United States)

    García-Torales, G.; Flores, J. L.; Muñoz, Roberto X.

    2007-03-01

    Risley prisms are commonly used in continuous scanning manner. Each prism is capable of rotating separately about a common axis at different speeds. Scanning patterns are determined by the ratios of the wedge angles, the speed and direction of rotation of both prisms. The use of this system is conceptually simple. However, mechanical action in most applications becomes a challenge often solved by the design of complex control algorithms. We propose an electronic servomotor system that controls incremental and continuous rotations of the prisms wedges by means of an auto-tuning PID control using a Adaline Neural Network Algorithm, NNA.

  20. Strain mapping in TEM using precession electron diffraction

    Energy Technology Data Exchange (ETDEWEB)

    Taheri, Mitra Lenore; Leff, Asher Calvin

    2017-02-14

    A sample material is scanned with a transmission electron microscope (TEM) over multiple steps having a predetermined size at a predetermined angle. Each scan at a predetermined step and angle is compared to a template, wherein the template is generated from parameters of the material and the scanning. The data is then analyzed using local mis-orientation mapping and/or Nye's tensor analysis to provide information about local strain states.

  1. Comparison of propofol (1% with admixture (1:1 of thiopentone (1.25% and propofol (0.5% for laryngeal mask airway insertion in children undergoing elective eye surgery: Double-masked randomized clinical trial

    Directory of Open Access Journals (Sweden)

    Renu Sinha

    2010-01-01

    Full Text Available Intravenous propofol 1% has been the preferred agent for Laryngeal Mask Airway (LMA insertion. Admixture of thiopentone 1.25% and propofol 0.5% (1:1 has been used by various authors for induction as well as insertion of LMA in adults. There is no previous report where this admixture has been used for insertion of LMA in children. This study has been designed to investigate whether this admixture can be a suitable alternative to propofol, in relation to ease of insertion of the LMA, haemodynamic stability, cost containment, pain on injection and recovery in children. In this randomized, double-masked study, 50 ASA grade 1 and 2 patients of age 3 - 15 years and weighing more than 10 kg were included. The patients were divided into two groups; the P group received propofol 1%, while the Ad group received an admixture of thiopentone 1.25% and propofol 0.5% (1:1. All the children were evaluated for incidence of apnoea, pain on injection, jaw relaxation, ease of LMA insertion, coughing, gagging, laryngospasm, involuntary limb movements, incidence of hypotension and recovery. The demographic data, incidence of apnoea, pain on injection, jaw relaxation, ease of LMA insertion, coughing, gagging and involuntary movements were comparable in both groups. In the P group recovery was faster as compared to the Ad group. The admixture was cost effective as compared to Propofol alone [Indian National Rupees (INR 24.64 ± 7.62 vs. INR 48.75 ± 23.25] (P = 0.001. Admixture of propofol and thiopentone was a cheap, safe and effective alternative to propofol alone, for LMA insertion in children.

  2. Comparison of propofol (1%) with admixture (1:1) of thiopentone (1.25%) and propofol (0.5%) for laryngeal mask airway insertion in children undergoing elective eye surgery: Double-masked randomized clinical trial

    Science.gov (United States)

    Sinha, Renu; Shende, Dilip; Garg, Rakesh

    2010-01-01

    Intravenous propofol 1% has been the preferred agent for Laryngeal Mask Airway (LMA) insertion. Admixture of thiopentone 1.25% and propofol 0.5% (1:1) has been used by various authors for induction as well as insertion of LMA in adults. There is no previous report where this admixture has been used for insertion of LMA in children. This study has been designed to investigate whether this admixture can be a suitable alternative to propofol, in relation to ease of insertion of the LMA, haemodynamic stability, cost containment, pain on injection and recovery in children. In this randomized, double-masked study, 50 ASA grade 1 and 2 patients of age 3 – 15 years and weighing more than 10 kg were included. The patients were divided into two groups; the P group received propofol 1%, while the Ad group received an admixture of thiopentone 1.25% and propofol 0.5% (1:1). All the children were evaluated for incidence of apnoea, pain on injection, jaw relaxation, ease of LMA insertion, coughing, gagging, laryngospasm, involuntary limb movements, incidence of hypotension and recovery. The demographic data, incidence of apnoea, pain on injection, jaw relaxation, ease of LMA insertion, coughing, gagging and involuntary movements were comparable in both groups. In the P group recovery was faster as compared to the Ad group. The admixture was cost effective as compared to Propofol alone [Indian National Rupees (INR) 24.64 ± 7.62 vs. INR 48.75 ± 23.25] (P = 0.001)). Admixture of propofol and thiopentone was a cheap, safe and effective alternative to propofol alone, for LMA insertion in children. PMID:20661346

  3. Chemical composition, effective atomic number and electron density study of trommel sieve waste (TSW), Portland cement, lime, pointing and their admixtures with TSW in different proportions.

    Science.gov (United States)

    Kurudirek, Murat; Aygun, Murat; Erzeneoğlu, Salih Zeki

    2010-06-01

    The trommel sieve waste (TSW) which forms during the boron ore production is considered to be a promising building material with its use as an admixture with Portland cement and is considered to be an alternative radiation shielding material, also. Thus, having knowledge on the chemical composition and radiation interaction properties of TSW as compared to other building materials is of importance. In the present study, chemical compositions of the materials used have been determined using a wavelength dispersive X-ray fluorescence spectrometer (WDXRFS). Also, TSW, some commonly used building materials (Portland cement, lime and pointing) and their admixtures with TSW have been investigated in terms of total mass attenuation coefficients (mu/rho), photon interaction cross sections (sigma(t)), effective atomic numbers (Z(eff)) and effective electron densities (N(e)) by using X-rays at 22.1, 25keV and gamma-rays at 88keV photon energies. Possible conclusions were drawn with respect to the variations in photon energy and chemical composition.

  4. Localizing Test Power Consumption for Scan Testing

    Institute of Scientific and Technical Information of China (English)

    XIANG Dong; LI Kai-wei

    2005-01-01

    A two stage scan architecture is proposed to do low powerand low test application cost scan testing. The first stage includes multiple scan chains, where each scan chain is driven by a primary input. Each scan flip-flop in the multiple scan chains drives a group of scan flip-flops. The scan flip-flop in the multiple scan chain and the scan flipflop driven by it are assigned the same values for all test vectors. Scan flip-flops in the multiple scan chains and those in the second stage use separate clock signals, but the design for testability technqiue needs only one clock. The proposed scan architecture localizes test power consumption to the multiple scan chains during test application. Test signals assigned to scan flip-flops in the multiple scan chains are applied to the scan flip-flops in the second stage after the test vector has been applied to the multiple scan chains. This technique can make test power consumption very small.

  5. Highlighting material structure with transmission electron diffraction correlation coefficient maps.

    Science.gov (United States)

    Kiss, Ákos K; Rauch, Edgar F; Lábár, János L

    2016-04-01

    Correlation coefficient maps are constructed by computing the differences between neighboring diffraction patterns collected in a transmission electron microscope in scanning mode. The maps are shown to highlight material structural features like grain boundaries, second phase particles or dislocations. The inclination of the inner crystal interfaces are directly deduced from the resulting contrast.

  6. Mapping Resilience

    DEFF Research Database (Denmark)

    Carruth, Susan

    2015-01-01

    Resilience theory is a growing discipline with great relevance for the discipline of planning, particularly in fields like energy planning that face great uncertainty and rapidly transforming contexts. Building on the work of the Stockholm Resilience Centre, this paper begins by outlining...... the relationship between resilience and energy planning, suggesting that planning in, and with, time is a core necessity in this domain. It then reviews four examples of graphically mapping with time, highlighting some of the key challenges, before tentatively proposing a graphical language to be employed...... by planners when aiming to construct resilient energy plans. It concludes that a graphical language has the potential to be a significant tool, flexibly facilitating cross-disciplinary communication and decision-making, while emphasising that its role is to support imaginative, resilient planning rather than...

  7. Spatial distribution maps for benthic communities

    DEFF Research Database (Denmark)

    Sørensen, Per S.

    1999-01-01

    amount of missing pixel data is a contribution to statistical image analysis. Furthermore, the estimation method developed for non-stationary Boolean models that combines scale-space kernel smoothing with the so-called method-of-moments applied to stationary Boolean models is a contribution to stochastic...... of the distribution maps and to be combined with biogeochemical models describing spatiotemporal population dynamics. Finally, the use of side-scan sonar data is illustrated in a data fusion exercise combining side-scan sonar data with the results based on echo sounder measurements. The feasible use of side......-scan sonar for mapping of benthic communities remains an open task to be studied in the future. The data processing methodology developed is a contribution to the emerging field of hydroacoustic marine biology. The method of penalised maximum pseudo-likelihood for estimation of the Ising model under a huge...

  8. High Resolution Scanning Ion Microscopy

    NARCIS (Netherlands)

    Castaldo, V.

    2011-01-01

    The structure of the thesis is the following. The first chapter is an introduction to scanning microscopy, where the path that led to the Focused Ion Beam (FIB) is described and the main differences between electrons and ion beams are highlighted. Chapter 2 is what is normally referred to (which I d

  9. Broadband antenna with frequency scanning

    Directory of Open Access Journals (Sweden)

    A. A. Shekaturin

    2014-06-01

    Full Text Available Relevance of this study. The main advantage of frequency scanning is simplicity of implementation. At this point, multifunctional usage of microwave modules is an urgent task, as well as their maximum simpler and cheaper. Antenna design and operation. The study is aimed at providing electric antenna with frequency scanning. It was based on the log-periodic antenna due to its wideband and negotiation capability over the entire operating frequency range. For this distribution line is bent in an arc of a circle in a plane blade while vibrators are arranged along the radius. Computer modeling of antennas with frequency scanning. Modeled with a non-mechanical motion antenna beam emitters representing system for receiving a radio frequency signal on mobile objects calculated for 1.8 GHz ... 4.2 GHz. The simulation was performed in a software environment for numerical modeling of electromagnetic «Feko 5.5». Analysis of the interaction of radiation is based on the method of moments. Findings. The result of this work is to propose a new design of the antenna with a frequency scanning method as agreed in a wide frequency range. In the studied technical solution provided by the rotation of NAM in the frequency range, and the matching of the antenna to the feed line is maintained. Application of this type of antennas on the proposed technical solution in communication systems will improve the communication reliability by maintaining coordination in the frequency range

  10. Technical aspects of CT scanning.

    Science.gov (United States)

    Maravilla, K R; Pastel, M S

    1978-01-01

    The advent of computed tomography (CT) has initiated a technological revolution which continues to the present time. A brief review of basic principles of CT scanning is presented, and the evolution of modern CT scanner systems is traced. Some early indications of future trends are also presented.

  11. Introduction to scanning tunneling microscopy

    CERN Document Server

    Chen, C Julian

    2008-01-01

    The scanning tunneling and the atomic force microscope, both capable of imaging individual atoms, were crowned with the Physics Nobel Prize in 1986, and are the cornerstones of nanotechnology today. This is a thoroughly updated version of this 'bible' in the field.

  12. Mapping of yellow mosaic virus (YMV) resistance in soybean (Glycine max L. Merr.) through association mapping approach.

    Science.gov (United States)

    Kumar, Bhupender; Talukdar, Akshay; Verma, Khushbu; Bala, Indu; Harish, G D; Gowda, Sarmrat; Lal, S K; Sapra, R L; Singh, K P

    2015-02-01

    Yellow Mosaic Virus (YMV) is a serious disease of soybean. Resistance to YMV was mapped in 180 soybean genotypes through association mapping approach using 121 simple sequence repeats (SSR) and four resistance gene analogue (RGA)-based markers. The association mapping population (AMP) (96 genotypes) and confirmation population (CP) (84 genotypes) was tested for resistance to YMV at hot-spot consecutively for 3 years (2007-2009). The genotypes exhibited significant variability for YMV resistance (P Molecular genotyping and population structure analysis with 'admixture' co-ancestry model detected seven optimal sub-populations in the AMP. Linkage disequilibrium (LD) between the markers extended up to 35 and 10 cM with r2 > 0.15, and >0.25, respectively. The 4 RGA-based markers showed no association with YMV resistance. Two SSR markers, Satt301 and GMHSP179 on chromosome 17 were found to be in significant LD with YMV resistance. Contingency Chi-square test confirmed the association (P < 0.01) and the utility of the markers was validated in the CP. It would pave the way for marker assisted selection for YMV resistance in soybean. This is the first report of its kind in soybean.

  13. Genome-wide mapping in a house mouse hybrid zone reveals hybrid sterility loci and Dobzhansky-Muller interactions.

    Science.gov (United States)

    Turner, Leslie M; Harr, Bettina

    2014-12-09

    Mapping hybrid defects in contact zones between incipient species can identify genomic regions contributing to reproductive isolation and reveal genetic mechanisms of speciation. The house mouse features a rare combination of sophisticated genetic tools and natural hybrid zones between subspecies. Male hybrids often show reduced fertility, a common reproductive barrier between incipient species. Laboratory crosses have identified sterility loci, but each encompasses hundreds of genes. We map genetic determinants of testis weight and testis gene expression using offspring of mice captured in a hybrid zone between M. musculus musculus and M. m. domesticus. Many generations of admixture enables high-resolution mapping of loci contributing to these sterility-related phenotypes. We identify complex interactions among sterility loci, suggesting multiple, non-independent genetic incompatibilities contribute to barriers to gene flow in the hybrid zone.

  14. A Vein Map Biometric System

    Directory of Open Access Journals (Sweden)

    Felix Fuentes

    2013-08-01

    Full Text Available There is increasing demand world-wide, from government agencies and the private sector for cutting-edge biometric security technology that is difficult to breach but userfriendly at the same time. Some of the older tools, such as fingerprint, retina and iris scanning, and facial recognition software have all been found to have flaws and often viewed negatively because of many cultural and hygienic issues associated with them. Comparatively, mapping veins as a human barcode, a new technology, has many advantages over older technologies. Specifically, reproducing a three-dimensional model of a human vein system is impossible to replicate. Vein map technology is distinctive because of its state-of-the-art sensors are only able to recognize vein patterns if hemoglobin is actively flowing through the person

  15. Control on Electron Beam Scanning Track

    Institute of Scientific and Technical Information of China (English)

    王学东; 姚舜

    2004-01-01

    In order to use electron beam as a movable welding heat source and whose energy distribution along its moving trace can be controlled, a method of electron beam scanning track and scanning mode control was put forward. Based on it, the electron beam scanning track and scanning mode can be edited at will according to actual requirements, and the energy input of each point of the scanning track can be controlled. In addition, the scanning frequency and points control, real time adjusting of the scanning track etc. were explained. This method can be used in electron beam brazing, surface modification, surface heat treatment etc.

  16. Human Mind Maps

    Science.gov (United States)

    Glass, Tom

    2016-01-01

    When students generate mind maps, or concept maps, the maps are usually on paper, computer screens, or a blackboard. Human Mind Maps require few resources and little preparation. The main requirements are space where students can move around and a little creativity and imagination. Mind maps can be used for a variety of purposes, and Human Mind…

  17. Visual SLAM Using Variance Grid Maps

    Science.gov (United States)

    Howard, Andrew B.; Marks, Tim K.

    2011-01-01

    An algorithm denoted Gamma-SLAM performs further processing, in real time, of preprocessed digitized images acquired by a stereoscopic pair of electronic cameras aboard an off-road robotic ground vehicle to build accurate maps of the terrain and determine the location of the vehicle with respect to the maps. Part of the name of the algorithm reflects the fact that the process of building the maps and determining the location with respect to them is denoted simultaneous localization and mapping (SLAM). Most prior real-time SLAM algorithms have been limited in applicability to (1) systems equipped with scanning laser range finders as the primary sensors in (2) indoor environments (or relatively simply structured outdoor environments). The few prior vision-based SLAM algorithms have been feature-based and not suitable for real-time applications and, hence, not suitable for autonomous navigation on irregularly structured terrain. The Gamma-SLAM algorithm incorporates two key innovations: Visual odometry (in contradistinction to wheel odometry) is used to estimate the motion of the vehicle. An elevation variance map (in contradistinction to an occupancy or an elevation map) is used to represent the terrain. The Gamma-SLAM algorithm makes use of a Rao-Blackwellized particle filter (RBPF) from Bayesian estimation theory for maintaining a distribution over poses and maps. The core idea of the RBPF approach is that the SLAM problem can be factored into two parts: (1) finding the distribution over robot trajectories, and (2) finding the map conditioned on any given trajectory. The factorization involves the use of a particle filter in which each particle encodes both a possible trajectory and a map conditioned on that trajectory. The base estimate of the trajectory is derived from visual odometry, and the map conditioned on that trajectory is a Cartesian grid of elevation variances. In comparison with traditional occupancy or elevation grid maps, the grid elevation variance

  18. Seismic scanning tunneling macroscope - Theory

    KAUST Repository

    Schuster, Gerard T.

    2012-09-01

    We propose a seismic scanning tunneling macroscope (SSTM) that can detect the presence of sub-wavelength scatterers in the near-field of either the source or the receivers. Analytic formulas for the time reverse mirror (TRM) profile associated with a single scatterer model show that the spatial resolution limit to be, unlike the Abbe limit of λ/2, independent of wavelength and linearly proportional to the source-scatterer separation as long as the point scatterer is in the near-field region; if the sub-wavelength scatterer is a spherical impedance discontinuity then the resolution will also be limited by the radius of the sphere. Therefore, superresolution imaging can be achieved as the scatterer approaches the source. This is analogous to an optical scanning tunneling microscope that has sub-wavelength resolution. Scaled to seismic frequencies, it is theoretically possible to extract 100 Hz information from 20 Hz data by imaging of near-field seismic energy.

  19. A Laser Scanning Tracking Method

    Science.gov (United States)

    Xu, Gaoyue; Hu, Baoli; Wang, Jiangping

    1988-04-01

    In this paper, a new tracking approach, a laser scanning tracking method (LSTM) is proposed. The LSTM has been designed to track a cylindrical retroreflective target mounted on the object, which makes plane motion. The retroreflector pasted by scotchlite reflective sheeting (mad. in 3M ,0.) i s located by scanning a laser beam in holizontal. When the retroreflector is struck, its position that is azimuth is read by microcomputer and the aiming device is servocontrolled by microcomputer according to this azimuth immediately. This is a step-by-step tracking method. The time of servo-reponse is less than one millisecona in actual tests. The angular accuracy is less than 0.5 milliradian. The track angular velocity is greater than one radian/second.

  20. 3D scanning with Kinect

    OpenAIRE

    Novak, David

    2012-01-01

    This paper describes the procedures and technologies used for scanning and three-dimensional reconstruction of objects using the optical scanner Kinect. Theoretical backgrounds of basic computer graphics, projective geometry, optics and graphical reconstruction were studied for better understanding of this field of computer science. A part of the content also describes the structure and operating of the Kinect and is used as a theoretical basis for implementing a new framework for three-di...