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Sample records for acids syn anti-1-amino-3-2-iodoethenyl-cyclobutane-1-carboxylic

  1. Assigning the stereochemistry of syn and anti β-trimethylsiloxy-α-trimethylsilyl alkanoic acid silyl esters using GIAO 1H NMR chemical shift calculations

    Science.gov (United States)

    Hadj Mohamed, Slim; Trabelsi, Mahmoud; Champagne, Benoît

    2017-08-01

    The stereostructure of β-trimethylsiloxy-α-trimethylsilyl alkanoic acid silyl esters synthesized by Bellassoued et al. [J. Org. Chem. 2001, 66, 5054-5057] using Mukaiyama aldol reaction has been reassigned using density functional theory NMR 1H chemical shifts calculations. It is now concluded that the major diastereoisomer is syn and the minor is anti. Within this assignment, for all silyl esters, δHa(anti) > δHa(syn), δHb(anti) 3JHa-Hb (syn). Since the experimental assignment was based on the stereostructure (E/Z) of the cinnamic acid obtained by elimination of trimethylsilyl 3-phenyl-3-(trimethylsiloxy)-2-(trimethylsilyl)propanoate in the presence of TiCl4 and on the assumption that this elimination is anti stereospecific in acidic medium, one arrives at the conclusion that the elimination of syn and anti β-trimethylsiloxy-α-trimethylsilyl alkanoic acid silyl esters is not anti stereospecific.

  2. Stereoselective synthesis and biological evaluation of syn-1-amino-3-[18F]fluorocyclobutyl-1-carboxylic acid as a potential positron emission tomography brain tumor imaging agent.

    Science.gov (United States)

    Yu, Weiping; Williams, Larry; Camp, Vernon M; Malveaux, Eugene; Olson, Jeffrey J; Goodman, Mark M

    2009-03-01

    Amino acid syn-1-amino-3-fluoro-cyclobutyl-1-carboxylic acid (syn-FACBC) 12, the isomer of anti-FACBC, has been selectively synthesized and [(18)F] radiofluorinated in 52% decay-corrected yield using no-carrier-added [(18)F]fluoride. The key step in the synthesis of the desired isomer involved stereoselective reduction using lithium alkylborohydride/zinc chloride, which improved the ratio of anti-alcohol to syn-alcohol from 17:83 to 97:3. syn-FACBC 12 entered rat 9L gliosarcoma cells primarily via L-type amino acid transport in vitro with high uptake of 16% injected dose per 5 x 10(5) cells. Biodistribution studies in rats with 9L gliosarcoma brain tumors demonstrated high tumor to brain ratio of 12:1 at 30 min post injection. In this model, amino acid syn-[(18)F]FACBC 12 is a promising metabolically based radiotracer for positron emission tomography brain tumor imaging.

  3. Radiation chemistry of cis-syn-cis dicyclohexano-18-crown-6 (DCH18C6): Acidity and uranyl nitrate dependence

    Energy Technology Data Exchange (ETDEWEB)

    Draye, Micheline [Laboratoire de Chimie Moleculaire et Environnement (EA1651), Universite de Savoie-Polytech' Savoie, Campus Scientifique, 73376 Le Bourget du Lac Cedex (France)], E-mail: micheline.draye@univ-savoie.fr; Favre-Reguillon, Alain [Laboratoire de Chimie Organique (UMR7084), Conservatoire National des Arts et Metiers, 2 rue conte, 75003 Paris (France); Faure, Rene [Laboratoire des sciences analytiques, UMR CNRS 5180, Universite Claude Bernard, Lyon 1, 43 boulevard du 11 Novembre 1918, 69622 Villeurbanne Cedex (France); Lemaire, Marc [Laboratoire de Catalyse et Synthese Organique, UMR CNRS 5246, Institut de Chimie et Biochimie Moleculaires et Supramoleculaires, Universite Lyon 1 CPE, 43 boulevard du 11 novembre 1918, Villeurbanne 69622 (France)

    2008-05-15

    The cis-syn-cis isomer of dicyclohexano-18-crown-6 (DCH18C6) has been shown to be an efficient extractant able to perform the separation of Pu(IV) and U(VI) from fission products and then the separation of Pu(IV) from U(VI) without valence exchange as required in the PUREX process. This macrocycle was irradiated in nitric acid with a {sup 137}Cs {gamma} source to study its radiation chemical stability. Radiation chemical yields (G) were determined by gas chromatography. The results show that the presence of uranyl nitrate has a strong influence on DCH18C6 radiation chemical stability. Indeed, the presence of this template ion increases the macrocycle stability by promoting fragments recombination.

  4. Polysialic acid modification of the synaptic cell adhesion molecule SynCAM 1 in human embryonic stem cell-derived oligodendrocyte precursor cells

    Directory of Open Access Journals (Sweden)

    Sebastian Werneburg

    2015-05-01

    Full Text Available Oligodendrocyte precursor cells (OPCs are the progenitors of myelinating oligodendrocytes in brain development and repair. Successful myelination depends on the control of adhesiveness during OPC migration and axon contact formation. The decoration of cell surface proteins with the glycan polysialic acid (polySia is a key regulatory element of OPC interactions during development and under pathological conditions. By far the major protein carrier of polySia is the neural cell adhesion molecule NCAM, but recently, polysialylation of the synaptic cell adhesion molecule SynCAM 1 has been detected in the developing mouse brain. In mice, polySia-SynCAM 1 is associated with cells expressing NG2, a marker of a heterogeneous precursor cell population, which is the primary source for oligodendrocytes in development and myelin repair but can also give rise to astrocytes and possibly neurons. It is not yet clear if polySia-SynCAM 1 is expressed by OPCs and its occurrence in humans is elusive. By generating uniform human embryonic stem cell-derived OPC cultures, we demonstrate that polySia is present on human OPCs but down-regulated during differentiation into myelin basic protein-positive oligodendrocytes. PolySia on NCAM resides on the isoforms NCAM-180 and NCAM-140, and SynCAM 1 is identified as a novel polySia acceptor in human OPCs.

  5. Synthesis of syn- and anti-1-amino-3-[18F]fluoromethyl-cyclobutane-1-carboxylic acid (FMACBC), potential PET ligands for tumor detection.

    Science.gov (United States)

    Martarello, Laurent; McConathy, Jonathan; Camp, Vernon M; Malveaux, Eugene J; Simpson, Nicholas E; Simpson, Chiab P; Olson, Jeffrey J; Bowers, Geoffrey D; Goodman, Mark M

    2002-05-23

    syn- and anti-1-amino-3-[18F]fluoromethyl-cyclobutane-1-carboxylic acid (FMACBC, 16 and 17), analogues of anti-1-amino-3-[18F]fluorocyclobutyl-1-carboxylic acid (FACBC), were prepared to evaluate the contributions of C-3 substitution and configuration on the uptake of these radiolabeled amino acids in a rodent model of brain tumors. Radiofluorinated targets [18F]16 and [18F]17 were prepared by no-carrier-added radiofluorination from their corresponding methanesulfonyl esters 12 and 13, respectively, with decay-corrected radiochemical yields of 30% for [18F]16 and 20% for [18F]17. In amino acid transport assays performed in vitro using 9L gliosarcoma cells, both [18F]16 and [18F]17 were substrates for L type amino acid transport, while [18F]17 but not [18F]16 was a substrate for A type transport. Biodistribution studies in normal Fischer rats with [18F]16 and [18F]17 showed high uptake of radioactivity (>2.0% dose/g) in the pancreas while other tissues studied, including liver, heart, lung, kidney, blood, muscle, and testis, showed relatively low uptake of radioactivity (FACBC, [18F]16 and [18F]17 are excellent candidates for imaging brain tumors.

  6. A new synthesis of enantiomerically pure syn-(S)-β-hydroxy-α-amino acids via asymmetric aldol reactions of aldehydes with a homochiral Ni(II)-glycine/(S)-BPB Schiff base complex

    NARCIS (Netherlands)

    Belokon, Yuri N.; Kochetkov, Konstantin A.; Ikonnikov, Nikolai S.; Strelkova, Tatiana V.; Harutyunyan, Syuzanna R.; Saghiyan, Ashot S.

    2001-01-01

    syn-(S)-β-Hydroxy-α-amino acids were synthesised stereoselectively via elaboration of the asymmetric aldol reactions of aldehydes with a chiral Ni(II)-(S)-BPB/glycine Schiff base complex in the presence of equimolar NaH in THF. The stereoselectivity of the reaction was studied as a function of time,

  7. Synæstesi

    DEFF Research Database (Denmark)

    Karstoft, Karen-Inge

    2010-01-01

    Alfabetet opleves i grønt, gult, blåt og rødt, og berøringer kan smages. Tonerne fra Beethovens 9. ses i kavalkader af pink, og duften fra aftensmåltidet føles blød, varm og luftig. For synæstetikere er grænserne mellem sansemodaliteter flydende, og de »ekstra« og »unormale« sanseoplevelser kan...

  8. Py4Syn: Python for synchrotrons.

    Science.gov (United States)

    Slepicka, H H; Canova, H F; Beniz, D B; Piton, J R

    2015-09-01

    In this report, Py4Syn, an open-source Python-based library for data acquisition, device manipulation, scan routines and other helper functions, is presented. Driven by easy-to-use and scalability ideals, Py4Syn offers control system agnostic solution and high customization level for scans and data output, covering distinct techniques and facilities. Here, most of the library functionalities are described, examples of use are shown and ideas for future implementations are presented.

  9. Stochastic Model of TCP SYN Attacks

    Directory of Open Access Journals (Sweden)

    Simona Ramanauskaitė

    2011-08-01

    Full Text Available A great proportion of essential services are moving into internet space making the threat of DoS attacks even more actual. To estimate the real risk of some kind of denial of service (DoS attack in real world is difficult, but mathematical and software models make this task easier. In this paper we overview the ways of implementing DoS attack models and offer a stochastic model of SYN flooding attack. It allows evaluating the potential threat of SYN flooding attacks, taking into account both the legitimate system flow as well as the possible attack power. At the same time we can assess the effect of such parameters as buffer capacity, open connection storage in the buffer or filte­ring efficiency on the success of different SYN flooding attacks. This model can be used for other type of memory depletion denial of service attacks.Article in Lithuanian

  10. MicroSyn: A user friendly tool for detection of microsynteny in a gene family

    Directory of Open Access Journals (Sweden)

    Yang Xiaohan

    2011-03-01

    Full Text Available Abstract Background The traditional phylogeny analysis within gene family is mainly based on DNA or amino acid sequence homologies. However, these phylogenetic tree analyses are not suitable for those "non-traditional" gene families like microRNA with very short sequences. For the normal protein-coding gene families, low bootstrap values are frequently encountered in some nodes, suggesting low confidence or likely inappropriateness of placement of those members in those nodes. Results We introduce MicroSyn software as a means of detecting microsynteny in adjacent genomic regions surrounding genes in gene families. MicroSyn searches for conserved, flanking colinear homologous gene pairs between two genomic fragments to determine the relationship between two members in a gene family. The colinearity of homologous pairs is controlled by a statistical distance function. As a result, gene duplication history can be inferred from the output independent of gene sequences. MicroSyn was designed for both experienced and non-expert users with a user-friendly graphical-user interface. MicroSyn is available from: http://fcsb.njau.edu.cn/microsyn/. Conclusions Case studies of the microRNA167 genes in plants and Xyloglucan ndotransglycosylase/Hydrolase family in Populus trichocarpa were presented to show the utility of the software. The easy using of MicroSyn in these examples suggests that the software is an additional valuable means to address the problem intrinsic in the computational methods and sequence qualities themselves in gene family analysis.

  11. CNoA: Challenging Number Approach for uncovering TCP SYN flooding using SYN spoofing attack

    Directory of Open Access Journals (Sweden)

    L.Kavisankar

    2011-10-01

    Full Text Available The challenging number is used for the detection of Spoofing attack. The IP Spoofing is considered to beone of the potentially brutal attack which acts as a tool for the DDoS attack which is considered to be amajor threat among security problems in today’s internet. These kinds of attack are extremely severe.They bring down business of company drastically. DDoS attack can easily exhaust the computing andcommunication resources of its victim within a short period of time. There are attacks exploiting somevulnerability or implementation bug in the software implementation of a service to bring that down andsome attacks will use all the available resources at the target machine. This deals on attacks thatconsume all the bandwidth available to the victim machine. While concentrating on the bandwidth attackthe TCP SYN flood is the more prominent attack. TCP/IP protocol suite is the most widely used protocolsuite for data communication. The TCP SYN flood works by exhausting the TCP connection queue of thehost and thus denying legitimate connection request. There are various methods used to detect andprevent this attack, one of which is to block the packet based on SYN flag count from the same IP address.This kind of prevention methods becomes unsuitable when the attackers use the Spoofed IP address. TheSYN spoofing becomes a major tool the TCP SYN flooding. For the prevention of this kind of attacks, theTCP specific probing is used in the proposed scheme where the client is requested challenging numberwhile sending the ACK in the three way hand shake. This is very useful to find the Spoofed IPPackets/TCP SYN flood and preventing them.

  12. Chemoenzymatic synthesis of new 2,4-syn-functionalized (S)-glutamate analogues and structure-activity relationship studies at ionotropic glutamate receptors and excitatory amino acid transporters.

    Science.gov (United States)

    Assaf, Zeinab; Larsen, Anja P; Venskutonytė, Raminta; Han, Liwei; Abrahamsen, Bjarke; Nielsen, Birgitte; Gajhede, Michael; Kastrup, Jette S; Jensen, Anders A; Pickering, Darryl S; Frydenvang, Karla; Gefflaut, Thierry; Bunch, Lennart

    2013-02-28

    In the mammalian central nervous system, (S)-glutamate (Glu) is released from the presynaptic neuron where it activates a plethora of pre- and postsynaptic Glu receptors. The fast acting ionotropic Glu receptors (iGluRs) are ligand gated ion channels and are believed to be involved in a vast number of neurological functions such as memory and learning, synaptic plasticity, and motor function. The synthesis of 14 enantiopure 2,4-syn-Glu analogues 2b-p is accessed by a short and efficient chemoenzymatic approach starting from readily available cyclohexanone 3. Pharmacological characterization at the iGluRs and EAAT1-3 subtypes revealed analogue 2i as a selective GluK1 ligand with low nanomolar affinity. Two X-ray crystal structures of the key analogue 2i in the ligand-binding domain (LBD) of GluA2 and GluK3 were determined. Partial domain closure was seen in the GluA2-LBD complex with 2i comparable to that induced by kainate. In contrast, full domain closure was observed in the GluK3-LBD complex with 2i, similar to that of GluK3-LBD with glutamate bound.

  13. Analysis of the SYN Flood DoS Attack

    Directory of Open Access Journals (Sweden)

    Mitko Bogdanoski

    2013-06-01

    Full Text Available The paper analyzes systems vulnerability targeted by TCP (Transmission Control Protocol segments when SYN flag is ON, which gives space for a DoS (Denial of Service attack called SYN flooding attack or more often referred as a SYN flood attack. The effects of this type of attack are analyzed and presented in OPNET simulation environment. Furthermore, the paper presents two anomaly detection algorithms as an effective mechanism against this type of attack. Finally, practical approaches against SYN flood attack for Linux and Windows environment which are followed by are shown.

  14. Dendritic Cells for SYN Scan Detection

    CERN Document Server

    Greensmith, Julie

    2010-01-01

    Artificial immune systems have previously been applied to the problem of intrusion detection. The aim of this research is to develop an intrusion detection system based on the function of Dendritic Cells (DCs). DCs are antigen presenting cells and key to activation of the human immune system, behaviour which has been abstracted to form the Dendritic Cell Algorithm (DCA). In algorithmic terms, individual DCs perform multi-sensor data fusion, asynchronously correlating the the fused data signals with a secondary data stream. Aggregate output of a population of cells, is analysed and forms the basis of an anomaly detection system. In this paper the DCA is applied to the detection of outgoing port scans using TCP SYN packets. Results show that detection can be achieved with the DCA, yet some false positives can be encountered when simultaneously scanning and using other network services. Suggestions are made for using adaptive signals to alleviate this uncovered problem.

  15. The RNA polymerase of marine cyanophage Syn5.

    Science.gov (United States)

    Zhu, Bin; Tabor, Stanley; Raytcheva, Desislava A; Hernandez, Alfredo; King, Jonathan A; Richardson, Charles C

    2013-02-01

    A single subunit DNA-dependent RNA polymerase was identified and purified to apparent homogeneity from cyanophage Syn5 that infects the marine cyanobacteria Synechococcus. Syn5 is homologous to bacteriophage T7 that infects Escherichia coli. Using the purified enzyme its promoter has been identified by examining transcription of segments of Syn5 DNA and sequencing the 5'-termini of the transcripts. Only two Syn5 RNAP promoters, having the sequence 5'-ATTGGGCACCCGTAA-3', are found within the Syn5 genome. One promoter is located within the Syn5 RNA polymerase gene and the other is located close to the right genetic end of the genome. The purified enzyme and its promoter have enabled a determination of the requirements for transcription. Unlike the salt-sensitive bacteriophage T7 RNA polymerase, this marine RNA polymerase requires 160 mm potassium for maximal activity. The optimal temperature for Syn5 RNA polymerase is 24 °C, much lower than that for T7 RNA polymerase. Magnesium is required as a cofactor although some activity is observed with ferrous ions. Syn5 RNA polymerase is more efficient in utilizing low concentrations of ribonucleotides than T7 RNA polymerase.

  16. Rosebud SynCoal Partnership, SynCoal{reg_sign} demonstration technology update

    Energy Technology Data Exchange (ETDEWEB)

    Sheldon, R.W. [Rosebud SynCoal Partnership, Billings, MT (United States)

    1997-12-31

    An Advanced Coal Conversion Process (ACCP) technology being demonstrated in eastern Montana (USA) at the heart of one of the world`s largest coal deposits is providing evidence that the molecular structure of low-rank coals can be altered successfully to produce a unique product for a variety of utility and industrial applications. The product is called SynCoal{reg_sign} and the process has been developed by the Rosebud SynCoal Partnership (RSCP) through the US Department of Energy`s multi-million dollar Clean Coal Technology Program. The ACCP demonstration process uses low-pressure, superheated gases to process coal in vibrating fluidized beds. Two vibratory fluidized processing stages are used to heat and convert the coal. This is followed by a water spray quench and a vibratory fluidized stage to cool the coal. Pneumatic separators remove the solid impurities from the dried coal. There are three major steps to the SynCoal{reg_sign} process: (1) thermal treatment of the coal in an inert atmosphere, (2) inert gas cooling of the hot coal, and (3) removal of ash minerals. When operated continuously, the demonstration plant produces over 1,000 tons per day (up to 300,000 tons per year) of SynCoal{reg_sign} with a 2% moisture content, approximately 11,800b Btu/lb and less than 1.0 pound of SO{sub 2} per million Btu. This product is obtained from Rosebud Mine sub-bituminous coal which starts with 25% moisture, 8,600 Btu/lb and approximately 1.6 pounds of SO{sub 2} per million Btu.

  17. Research on Protecting Against SYN Flooding on a Firewall

    Institute of Scientific and Technical Information of China (English)

    ZHENG Wei-bin; ZHANG De-yun; LIU Wei-na; GAO Lei; WU Zhan

    2003-01-01

    SYN proxy is a firewall's solution to protect against SYN flooding. It plays well under the low rate of attacks, but stumbles under heavy loads. In this paper, a novel approach based on SYN proxy is introduced, its design explained, and its performance evaluated. In this approach, the hash table is used to save half-connection states under light loads, and SYN cookie used under heavy loads. A bitmap is introduced into buckets of the hash table,which speedups of the lookup under SYN Flooding. Bucket length of the hash table is limited to a predefined value,thereby the performance degradation is prevented. A firewall implementing our proposal is tested, which shows that good performance is achieved.

  18. SynCardia: the total artificial heart.

    Science.gov (United States)

    Torregrossa, Gianluca; Anyanwu, Anelechi; Zucchetta, Fabio; Gerosa, Gino

    2014-11-01

    The SynCardia total artificial heart (TAH) currently provides the most definitive option for patients with biventricular failure who are not candidates for isolated left ventricular (LV) assist device placement. The techniques for implantation are adaptable to almost all patients with advanced heart failure, including those with severe biventricular cardiomyopathy, complex congenital heart disease, failed LV assist devices, failed transplantations, and acquired structural heart defects that have failed or are not amenable to conventional surgical treatment. Over the years, the implantation technique has evolved in order to minimize the surgical invasiveness of the procedure, in anticipation of additional future surgery. Meticulous hemostasis with double layer sutures, use of Gore-Tex sheets around the TAH and the pericardial cavity, and use of tissue expanders to avoid contraction of pericardial cavity around the device are discussed in detail in the following report. Additionally, we will provide our experience with implantation of TAH in various challenging scenarios, such as patients with a small chest cavity, congenital heart defects, and simultaneous use of extracorporeal membrane oxygenation (ECMO).

  19. SynLam(TM) Primary Mirror Evaluation Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Cornerstone Research Group, Inc. (CRG), has developed sandwich core composite material (SynLam(TM)) and related fabrication technology to address the drawbacks of...

  20. CNoA: Challenging Number Approach for uncovering TCP SYN flooding using SYN spoofing attack

    CERN Document Server

    Kavisankar, L

    2011-01-01

    The challenging number is used for the detection of Spoofing attack. The IP Spoofing is considered to be one of the potentially brutal attack which acts as a tool for the DDoS attack which is considered to be a major threat among security problems in today's internet. These kinds of attack are extremely severe. They bring down business of company drastically. DDoS attack can easily exhaust the computing and communication resources of its victim within a short period of time. There are attacks exploiting some vulnerability or implementation bug in the software implementation of a service to bring that down and some attacks will use all the available resources at the target machine. This deals on attacks that consume all the bandwidth available to the victim machine. While concentrating on the bandwidth attack the TCP SYN flood is the more prominent attack. TCP/IP protocol suite is the most widely used protocol suite for data communication. The TCP SYN flood works by exhausting the TCP connection queue of the h...

  1. Overview of SYN flood attack detection techniques%SYN flood攻击检测技术综述

    Institute of Scientific and Technical Information of China (English)

    石利平

    2011-01-01

    分析SYN flood attack攻击原理,并在此基础上研究几种典型的SYN flood攻击检测方法。对主要技术进行分析和比较,这些技术均有各自的优点和局限性,多种方法有机融合互补将成为SYN flood攻击检测研究的重点。%This paper analyses the principle of SYN flood attack,and some typical detecting methods are researched based on it.This paper summarizes and analyzes each of these schemes.These schemes have their own advantages and limitations,so organically combining s

  2. Principle and prevention of TCP SYN Flood attack%TCP SYN Flood攻击的原理与防范

    Institute of Scientific and Technical Information of China (English)

    吴华光; 甘燕玲

    2005-01-01

    保证网络安全是网络技术正常发展和网络的正常运行的重要研究方向,通过讨论TCP三次握手的缺陷和TCP SYN Flood攻击的基本原理,探讨防御TCP SYN Flood攻击可以采取的措施.

  3. SynMap2 and SynMap3D: web-based whole-genome synteny browsers.

    Science.gov (United States)

    Haug-Baltzell, Asher; Stephens, Sean A; Davey, Sean; Scheidegger, Carlos E; Lyons, Eric

    2017-07-15

    Current synteny visualization tools either focus on small regions of sequence and do not illustrate genome-wide trends, or are complicated to use and create visualizations that are difficult to interpret. To address this challenge, The Comparative Genomics Platform (CoGe) has developed two web-based tools to visualize synteny across whole genomes. SynMap2 and SynMap3D allow researchers to explore whole genome synteny patterns (across two or three genomes, respectively) in responsive, web-based visualization and virtual reality environments. Both tools have access to the extensive CoGe genome database (containing over 30 000 genomes) as well as the option for users to upload their own data. By leveraging modern web technologies there is no installation required, making the tools widely accessible and easy to use. Both tools are open source (MIT license) and freely available for use online through CoGe ( https://genomevolution.org ). SynMap2 and SynMap3D can be accessed at http://genomevolution.org/coge/SynMap.pl and http://genomevolution.org/coge/SynMap3D.pl , respectively. Source code is available: https://github.com/LyonsLab/coge . ericlyons@email.arizona.edu. Supplementary data are available at Bioinformatics online.

  4. Defensive research on SYN Flood attack%SYN Flood攻击的防御性研究

    Institute of Scientific and Technical Information of China (English)

    孟威; 薛仁政; 姜永曾; 吴迪

    2015-01-01

    SYN Flood attack is one of the popular attack in distributed denial of service attack.The attack is mainly the use of loopholes in the agreement,sending a large number of the source IP address forgery attack messages,in order to make the target system resource depletion.For the effective prevention of SYN Flood attack,it describes in kinds of SYN Flood attack defense measures,in order that legitimate users access to network resource.%SYN Flood 攻击是分布式拒绝服务攻击中流行的攻击方式之一。这种攻击主要是利用协议的漏洞,发送大量伪造的源IP地址的攻击报文,使目标系统资源耗尽。为了有效地防范SYN Flood的攻击,描述了几种防御SYN Flood攻击的措施,使合法用户正常访问网络资源。

  5. A Concise and Highly Enantioselective Total Synthesis of (+)-anti- and (-)-syn-Mefloquine Hydrochloride: Definitive Absolute Stereochemical Assignment of the Mefloquines.

    Science.gov (United States)

    Rastelli, Ettore J; Coltart, Don M

    2015-11-16

    A concise asymmetric (>99:1 e.r.) total synthesis of (+)-anti- and (-)-syn-mefloquine hydrochloride from a common intermediate is described. The key asymmetric transformation is a Sharpless dihydroxylation of an olefin that is accessed in three steps from commercially available materials. The Sharpless-derived diol is converted into either a trans or cis epoxide, and these are subsequently converted into (+)-anti- and (-)-syn-mefloquine, respectively. The synthetic (+)-anti- and (-)-syn-mefloquine samples were derivatized with (S)-(+)-mandelic acid tert-butyldimethylsilyl ether, and a crystal structure of each derivative was obtained. These are the first X-ray structures for mefloquine derivatives that were obtained by coupling to a known chiral, nonracemic compound, and provide definitive confirmation of the absolute stereochemistry of (+)-anti- as well as (-)-syn-mefloquine.

  6. SynBlast: Assisting the analysis of conserved synteny information

    Directory of Open Access Journals (Sweden)

    Stadler Peter F

    2008-08-01

    Full Text Available Abstract Motivation In the last years more than 20 vertebrate genomes have been sequenced, and the rate at which genomic DNA information becomes available is rapidly accelerating. Gene duplication and gene loss events inherently limit the accuracy of orthology detection based on sequence similarity alone. Fully automated methods for orthology annotation do exist but often fail to identify individual members in cases of large gene families, or to distinguish missing data from traceable gene losses. This situation can be improved in many cases by including conserved synteny information. Results Here we present the SynBlast pipeline that is designed to construct and evaluate local synteny information. SynBlast uses the genomic region around a focal reference gene to retrieve candidates for homologous regions from a collection of target genomes and ranks them in accord with the available evidence for homology. The pipeline is intended as a tool to aid high quality manual annotation in particular in those cases where automatic procedures fail. We demonstrate how SynBlast is applied to retrieving orthologous and paralogous clusters using the vertebrate Hox and ParaHox clusters as examples. Software The SynBlast package written in Perl is available under the GNU General Public License at http://www.bioinf.uni-leipzig.de/Software/SynBlast/.

  7. SynUTC - high precision time synchronization over ethernet networks

    CERN Document Server

    Höller, R; Horauer, M; Kerö, N; Schmid, U; Schossmaier, K

    2002-01-01

    This article describes our SynUTC (Synchronized Universal Time Coordinated) technology, which enables high-accuracy distribution of GPS time and time synchronization of network nodes connected via standard Ethernet LANs. By means of exchanging data packets in conjunction with moderate hardware support at nodes and switches, an overall worst-case accuracy in the range of some 100 ns can be achieved, with negligible communication overhead. Our technology thus improves the 1 ms-range accuracy achievable by conventional, software-based approaches like NTP by 4 orders of magnitude. Applications can use the high-accuracy global time provided by SynUTC for event timestamping and event generation both at hardware and software level. SynUTC is based upon inserting highly accurate time information into dedicated data packets at the media-independent interface (MII) between the physical layer transceiver and the network controller upon packet transmission and reception, respectively. As a consequence, every node has acc...

  8. Methylenedioxy- and methoxyflavones from Melicope coodeana syn. Euodia simplex

    DEFF Research Database (Denmark)

    Simonsen, Henrik Toft; Larsen, Michael D; Nielsen, Merete W;

    2002-01-01

    Three new natural products, 3,8-dimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone, 3,6,8-trimethoxy-5,7-dihydroxy-3',4'-methylenedioxyflavone and 3,6,8,3',4'-pentamethoxy-5,7-dihydroxyflavone were isolated from Melicope coodeana syn. Euodia simplex (Rutaceae) along with 3,6,3'-trimethoxy-5...

  9. Stereochemistry of the epoxidation of bicyclo[2.2.1]hept-2-ene and its 7-syn-substituted derivatives. A DFT study

    Directory of Open Access Journals (Sweden)

    Sergiy I. Okovytyy

    2014-12-01

    Full Text Available The stereochemical aspects of epoxidation of norbornene and its 7-syn-substituted derivatives by performic acid were investigated. Geometry and thermodynamic parameters of transition states and prereactive complexes were computed at the UBHandHLYP/6-31G(d level of theory. It is shown that the transition states have a pronounced biradical character and a nearly coplanar orientation of the C=C bond and the molecule of performic acid. Transition state analysis revealed that, in the case of the syn-7-hydroxy derivative, the preference for the exo-approach of the oxidant can be explained by the stabilization of transition state with hydrogen bonding. In contrast, a chlorine atom or a methyl group at the 7-syn position facilitated the formation of endo-epoxides due to steric repulsion between the substituent and the oxidant.

  10. Genome sequence, structural proteins, and capsid organization of the cyanophage Syn5: a "horned" bacteriophage of marine synechococcus.

    Science.gov (United States)

    Pope, Welkin H; Weigele, Peter R; Chang, Juan; Pedulla, Marisa L; Ford, Michael E; Houtz, Jennifer M; Jiang, Wen; Chiu, Wah; Hatfull, Graham F; Hendrix, Roger W; King, Jonathan

    2007-05-11

    Marine Synechococcus spp and marine Prochlorococcus spp are numerically dominant photoautotrophs in the open oceans and contributors to the global carbon cycle. Syn5 is a short-tailed cyanophage isolated from the Sargasso Sea on Synechococcus strain WH8109. Syn5 has been grown in WH8109 to high titer in the laboratory and purified and concentrated retaining infectivity. Genome sequencing and annotation of Syn5 revealed that the linear genome is 46,214 bp with a 237 bp terminal direct repeat. Sixty-one open reading frames (ORFs) were identified. Based on genomic organization and sequence similarity to known protein sequences within GenBank, Syn5 shares features with T7-like phages. The presence of a putative integrase suggests access to a temperate life cycle. Assignment of 11 ORFs to structural proteins found within the phage virion was confirmed by mass-spectrometry and N-terminal sequencing. Eight of these identified structural proteins exhibited amino acid sequence similarity to enteric phage proteins. The remaining three virion proteins did not resemble any known phage sequences in GenBank as of August 2006. Cryo-electron micrographs of purified Syn5 virions revealed that the capsid has a single "horn", a novel fibrous structure protruding from the opposing end of the capsid from the tail of the virion. The tail appendage displayed an apparent 3-fold rather than 6-fold symmetry. An 18 A resolution icosahedral reconstruction of the capsid revealed a T=7 lattice, but with an unusual pattern of surface knobs. This phage/host system should allow detailed investigation of the physiology and biochemistry of phage propagation in marine photosynthetic bacteria.

  11. Porcine synapsin 1: SYN1 gene analysis and functional characterization of the promoter

    DEFF Research Database (Denmark)

    Hedegaard, Claus; Kjaer-Sorensen, Kasper; Madsen, Lone Bruhn

    2013-01-01

    of elements responsible for neuron-specific expression. Expression analysis of SYN1 demonstrated presence of transcript during embryonic development. Analysis of GFP expression in transgenic zebrafish embryos suggests that the pig SYN1 promoter directs expression in neuronal cells. Thus, the SYN1 promoter...

  12. DPT tautomerisation of the G·A(syn) and A*·G*(syn) DNA mismatches: a QM/QTAIM combined atomistic investigation.

    Science.gov (United States)

    Brovarets', Ol'ha O; Hovorun, Dmytro M

    2014-05-21

    By applying a combined QM and QTAIM atomistic computational approach we have established for the first time that the G·A(syn) and A*·G*(syn) DNA mismatches (rare tautomers are marked with an asterisk), causing spontaneous transversions with substantially various probabilities, radically differ from each other in their ability to tautomerise through the double proton transfer (DPT). The A*·G*(syn) mismatch tautomerises quite easily (ΔΔG(TS) ≈ 4·kT at room temperature) into the A·G*(syn) mismatch through the asynchronous concerted mechanism, whereas the G·A(syn) base mispair does not tautomerise via the DPT at all, since there is no local minimum corresponding to the tautomerised G*·A*(syn) mismatch on the potential energy surface. It was established that the A·G*(syn) base mispair is a dynamically unstable H-bonded complex with an extremely short lifetime of 2.17 × 10(-13) s. Consequently, the obtained results allow us to believe that spontaneous or forced dissociation of both the G·A(syn) and A*·G*(syn) DNA mismatches by the DNA-polymerase occurs with the preservation of the tautomeric status of the bases.

  13. Review of syn-flooding attack detection mechanism

    CERN Document Server

    Manna, Mehdi Ebady

    2012-01-01

    Denial of Service (DoS) is a security threat which compromises the confidentiality of information stored in Local Area Networks (LANs) due to unauthorized access by spoofed IP addresses. SYN Flooding is a type of DoS which is harmful to network as the flooding of packets may delay other users from accessing the server and in severe cases, the server may need to be shut down, wasting valuable resources, especially in critical real-time services such as in e-commerce and the medical field. The objective of this paper is to review the state-of-the art of detection mechanisms for SYN flooding. The detection schemes for SYN Flooding attacks have been classified broadly into three categories - detection schemes based on the router data structure, detection schemes based on statistical analysis of the packet flow and detection schemes based on artificial intelligence. The advantages and disadvantages for various detection schemes under each category have been critically examined. The performance measures of the cate...

  14. A Brief Analysis on Principle and Realization of SYN Flood Attack%浅析SYN Flood攻击的原理及实现

    Institute of Scientific and Technical Information of China (English)

    王宁; 田亚兰

    2012-01-01

    SYN Flood attack is a common denial of service attack and a typical network threat at present. SYN flood uses the leaks in the process of establishing TCP connections to attack. On the basis of analy- zing TCP protocol and the principle of SYN Flood attack, the paper introduces TCP/IP packet header for- mat and partial attacking programs. Besides, an attacking experiment is carried out on a simple network platform by using designed attacking programs. According to the experimental results, the bad effects of SYN Flood are analyzed to help to make effective defense designs.%SYN Flood攻击是拒绝服务攻击中的一种典型攻击手段,是目前主流的网络威胁.SYN flood是利用TCP协议连接建立过程中存在的漏洞进行攻击.在分析了TCP协议和SYN Flood攻击原理的基础上,介绍了TCP/IP报文首部格式及部分攻击程序,并通过设计好的攻击程序在搭建的简单网络平台上进行攻击实验.根据实验结果分析SYN Flood所产生的危害,能帮助我们进行有效防御设计.

  15. Internal hysteresis experienced on a high pressure syn gas compressor

    Science.gov (United States)

    Zeidan, F. Y.

    1984-01-01

    A vibration instability phenomenon experienced in operating high pressure syn gas centrifugal compressors in two ammonia plants is described. The compressors were monitored by orbit and spectrum analysis for changes from baseline readings. It is found that internal hysteresis was the major destabilizing force; however, the problem was further complicated by seal lockup at the suction end of the compressor. A coupling lockup problem and a coupling fit problem, which frettage of the shaft, are also considered as contributors to the self excited vibrations.

  16. Research on a New Intrusion Protection Model Against the SYN Flood Attacks%一个新的SYN Flood攻击防御模型的研究

    Institute of Scientific and Technical Information of China (English)

    曾小荟; 冷明; 刘冬生; 李平; 金士尧

    2011-01-01

    针对现有的SYN Flood攻击防御方法的不足,本文提出了一个基于TCP连接三次握手的新的防御模型.当系统检测到SYN Flood攻击后,立即把那些占用系统资源的带有典型攻击特征的第一次握手请求永久抛弃,以保证新的正常请求能够被接受;而把其他带有疑似攻击特征的第一次握手请求暂时抛弃,尔后启动自适应学习模块来修正现有的入侵模式,最后再启动SYN Flood攻击检测模块来进一步精确判定.在此基础上设计实现了一套新的SYN Flood攻击防御系统.实验测试结果表明,本入侵防御系统能有效地帮助整个系统提高对抗SYN Flood攻击的能力.%Aiming at the drawbacks of the current SYN flood attack prevention methods, a new intrusion prevention model against the SYN flood attacks is put forward based on the three-way handshake process. When the network system is suffering from the SYN flood attacks, the first handshake requests with the typical SYN flood attack feature will be immediately picked out and abandoned permanently;thereby the attacked system has adequate resources to deal with the new normal network requests. Other first handshake requests with the suspected SYN flood attack feature will be abandoned temporarily,and then adaptive learning module is started to revise the current intrusion patterns. In the end, the SYN Flood attack detection module will be restarted to get the further precise determination based on the updated intrusion patterns. An efficient intrusion prevention system against the SYN Flood attacks is designed and implemented, and the experimental results show that our intrusion prevention system can improve the whole system's protection capability against the SYN flood attacks.

  17. Far-Infrared Spectroscopy of Syn-Vinyl Alcohol

    Science.gov (United States)

    Raston, Paul; Bunn, Hayley

    2016-06-01

    Vinyl alcohol has been extensively studied in both the microwave and mid-IR spectral regions, where 9 out of 15 vibrational modes have been identified. Here we present the first far-IR spectrum of vinyl alcohol, collected below 700 wn at the Australian Synchrotron. The high resolution (0.001 wn) spectrum reveals the νb{11} and νb{15} fundamentals of syn-vinyl alcohol at 489 wn and 407 wn, in addition to two hot bands of the νb{15} mode at 369 wn and 323 wn. High J transitions in the R-branch of the νb{15} band were found to be perturbed by an a-axis Coriolis interaction with the nearby νb{11} state. The νb{15} torsional mode of syn-vinyl alcohol was fit using a Watson's A-reduced Hamiltonian to yield rotational, centrifugal distortion, and Coriolis coupling parameters. S. Saito, Chem. Phys. Lett. 42, 3 (1976) M. Rodler et al., J. Am. Chem. Soc. 106, 4029 (1948) Y. Koga et al., J. Mol. Spec. 145, 315 (1991) D-L. Joo et al., J. Mol. Spec. 197, 68 (1999)

  18. Adaptive Timer-Based Countermeasures against TCP SYN Flood Attacks

    Science.gov (United States)

    Tanabe, Masao; Akaike, Hirofumi; Aida, Masaki; Murata, Masayuki; Imase, Makoto

    As a result of the rapid development of the Internet in recent years, network security has become an urgent issue. Distributed denial of service (DDoS) attacks are one of the most serious security issues. In particular, 60 percent of the DDoS attacks found on the Internet are TCP attacks, including SYN flood attacks. In this paper, we propose adaptive timer-based countermeasures against SYN flood attacks. Our proposal utilizes the concept of soft-state protocols that are widely used for resource management on the Internet. In order to avoid deadlock, a server releases resources using a time-out mechanism without any explicit requests from its clients. If we change the value of the timer in accordance with the network conditions, we can add more flexibility to the soft-state protocols. The timer is used to manage the resources assigned to half-open connections in a TCP 3-way handshake mechanism, and its value is determined adaptively according to the network conditions. In addition, we report our simulation results to show the effectiveness of our approach.

  19. Technical Note: n-Alkane lipid biomarkers in loess: post-sedimentary or syn-sedimentary?

    Directory of Open Access Journals (Sweden)

    D. Faust

    2012-07-01

    Full Text Available There is an ongoing discussion whether n-alkane biomarkers – and organic matter (OM from loess in general – reflect a syn-sedimentary paleoenvironmental and paleoclimate signal or whether they are significantly a post-sedimentary feature contaminated by root-derived OM. We present first radiocarbon data for the n-alkane fraction of lipid extracts and for the first time luminescence ages for the Middle to Late Weichselian loess-paleosol sequence of Gleina in Saxony, Germany. Comparison of these biomarker ages with sedimentation ages as assessed by optically stimulated luminescence (OSL dating shows that one n-alkane sample features a syn-sedimentary age (14C: 29.2 ± 1.4 kyr cal BP versus OSL: 27.3 ± 3.0 kyr. By contrast, the 14C ages derived from the other n-alkane samples are clearly younger (20.3 ± 0.7 kyr cal BP, 22.1 ± 0.7 kyr cal BP and 29.8 ± 1.4 kyr cal BP than the corresponding OSL ages (26.6 ± 3.1 kyr, 32.0 ± 3.5 kyr and 45.6 ± 5.3 kyr. This finding suggests that a post-sedimentary n-alkane contamination presumably by roots has occurred. In order to estimate the post-sedimentary n-alkane contamination more quantitatively, we applied a 14C mass balance calculation based on the measured pMC (percent modern carbon values, the calculated syn-sedimentary pMC values and pMC values suspected to reflect likely time points of post-sedimentary contamination (current, modern, 3 kyr, 6 kyr and 9 kyr. Accordingly, current and modern root-contamination would account for up to 7%, a 3 kyr old root-contamination for up to 10%, and an Early and Middle Holocene root-contamination for up to 20% of the total sedimentary n-alkane pool. We acknowledge and encourage that these first radiocarbon results need further confirmation both from other loess-paleosol sequences and for different biomarkers, e.g. carboxylic acids or alcohols as further lipid biomarkers.

  20. Total synthesis of (+)-geldanamycin and (-)-o-quinogeldanamycin with use of asymmetric anti- and syn-glycolate aldol reactions.

    Science.gov (United States)

    Andrus, Merritt B; Meredith, Erik L; Simmons, Bryon L; Soma Sekhar, B B V; Hicken, Erik J

    2002-10-03

    Geldanamycin (GA), an antitumor Hsp90 inhibitor, was made for the first time by using an oxidative demethylation reaction as the final step. A biaryldioxanone auxiliary set the anti C11-12 hydroxy-methoxy functionality and a methylglycolate auxiliary based on norephedrine was used for the syn C6-7 methoxy-urethane. p-Quinone-forming oxidants, CAN and AgO, produced an unusual aza-quinone product. Nitric acid gave GA from a trimethoxy precursor in 55% yield as a 1:10 mixture with nonnatural o-quino-GA. [structure: see text

  1. 基于策略系统的SYN Flooding攻击防御机制%Mechanism of Preventing SYN Flooding Attack Based on Policy System

    Institute of Scientific and Technical Information of China (English)

    仇小锋; 陈鸣; 蒋序平

    2004-01-01

    拒绝服务(denial of service)攻击对网络带来的危害越来越严重,SYN Flooding攻击是DoS攻击中著名的一种.本文介绍了在网络测量平台上基于策略系统的SYN Flooding攻击防御机制.文章首先简单介绍了SYN Flooding的攻击原理、防御方法以及网络监测系统,然后对策略系统进行了讨论,最后详细阐述了网络测量平台上基于策略系统的SYN Flooding攻击检测和追踪工具的设计与实现,并进行了分析.

  2. Structural Design of SynRM Rotor, and the Effect on Power Factor

    DEFF Research Database (Denmark)

    Henriksen, Matthew Lee; Jensen, Bogi Bech; Mijatovic, Nenad;

    2015-01-01

    In this paper, structural designs for multiple synchoronous reluctance machine (SynRM) rotor configurations are presented. The rotor flux bridges are increased in thickness until mechanical integrity is achieved, and then the performance of the resulting SynRM is observed. After performing this a...

  3. Structural Design of SynRM Rotor, and the Effect on Power Factor

    DEFF Research Database (Denmark)

    Henriksen, Matthew Lee; Jensen, Bogi Bech; Mijatovic, Nenad;

    2015-01-01

    In this paper, structural designs for multiple synchoronous reluctance machine (SynRM) rotor configurations are presented. The rotor flux bridges are increased in thickness until mechanical integrity is achieved, and then the performance of the resulting SynRM is observed. After performing...

  4. Diverse chromatin remodeling genes antagonize the Rb-involved SynMuv pathways in C. elegans.

    Directory of Open Access Journals (Sweden)

    Mingxue Cui

    2006-05-01

    Full Text Available In Caenorhabditis elegans, vulval cell-fate specification involves the activities of multiple signal transduction and regulatory pathways that include a receptor tyrosine kinase/Ras/mitogen-activated protein kinase pathway and synthetic multivulva (SynMuv pathways. Many genes in the SynMuv pathways encode transcription factors including the homologs of mammalian Rb, E2F, and components of the nucleosome-remodeling deacetylase complex. To further elucidate the functions of the SynMuv genes, we performed a genome-wide RNA interference (RNAi screen to search for genes that antagonize the SynMuv gene activities. Among those that displayed a varying degree of suppression of the SynMuv phenotype, 32 genes are potentially involved in chromatin remodeling (called SynMuv suppressor genes herein. Genetic mutations of two representative genes (zfp-1 and mes-4 were used to further characterize their positive roles in vulval induction and relationships with Ras function. Our analysis revealed antagonistic roles of the SynMuv suppressor genes and the SynMuv B genes in germline-soma distinction, RNAi, somatic transgene silencing, and tissue specific expression of pgl-1 and the lag-2/Delta genes. The opposite roles of these SynMuv B and SynMuv suppressor genes on transcriptional regulation were confirmed in somatic transgene silencing. We also report the identifications of ten new genes in the RNAi pathway and six new genes in germline silencing. Among the ten new RNAi genes, three encode homologs of proteins involved in both protein degradation and chromatin remodeling. Our findings suggest that multiple chromatin remodeling complexes are involved in regulating the expression of specific genes that play critical roles in developmental decisions.

  5. Loss of SynDIG1 Reduces Excitatory Synapse Maturation But Not Formation In Vivo

    Science.gov (United States)

    Kaur, Inderpreet; Liu, Xiao-Bo; Kirk, Lyndsey M.; Speca, David J.; McMahon, Samuel A.; Zito, Karen

    2016-01-01

    Abstract Modification of the strength of excitatory synaptic connections is a fundamental mechanism by which neural circuits are refined during development and learning. Synapse Differentiation Induced Gene 1 (SynDIG1) has been shown to play a key role in regulating synaptic strength in vitro. Here, we investigated the role of SynDIG1 in vivo in mice with a disruption of the SynDIG1 gene rather than use an alternate loxP-flanked conditional mutant that we find retains a partial protein product. The gene-trap insertion with a reporter cassette mutant mice shows that the SynDIG1 promoter is active during embryogenesis in the retina with some activity in the brain, and postnatally in the mouse hippocampus, cortex, hindbrain, and spinal cord. Ultrastructural analysis of the hippocampal CA1 region shows a decrease in the average PSD length of synapses and a decrease in the number of synapses with a mature phenotype. Intriguingly, the total synapse number appears to be increased in SynDIG1 mutant mice. Electrophysiological analyses show a decrease in AMPA and NMDA receptor function in SynDIG1-deficient hippocampal neurons. Glutamate stimulation of individual dendritic spines in hippocampal slices from SynDIG1-deficient mice reveals increased short-term structural plasticity. Notably, the overall levels of PSD-95 or glutamate receptors enriched in postsynaptic biochemical fractions remain unaltered; however, activity-dependent synapse development is strongly compromised upon the loss of SynDIG1, supporting its importance for excitatory synapse maturation. Together, these data are consistent with a model in which SynDIG1 regulates the maturation of excitatory synapse structure and function in the mouse hippocampus in vivo.

  6. Communication: Thermal unimolecular decomposition of syn-CH3CHOO: A kinetic study

    Science.gov (United States)

    Nguyen, Thanh Lam; McCaslin, Laura; McCarthy, Michael C.; Stanton, John F.

    2016-10-01

    The thermal decomposition of syn-ethanal-oxide (syn-CH3CHOO) through vinyl hydrogen peroxide (VHP) leading to hydroxyl radical is characterized using a modification of the HEAT thermochemical protocol. The isomerization step of syn-CH3CHOO to VHP via a 1,4 H-shift, which involves a moderate barrier of 72 kJ/mol, is found to be rate determining. A two-dimensional master equation approach, in combination with semi-classical transition state theory, is employed to calculate the time evolution of various species as well as to obtain phenomenological rate coefficients. This work suggests that, under boundary layer conditions in the atmosphere, thermal unimolecular decomposition is the most important sink of syn-CH3CHOO. Thus, the title reaction should be included into atmospheric modeling. The fate of cold VHP, the intermediate stabilized by collisions with a third body, has also been investigated.

  7. Appetitively motivated instrumental learning in SynGAP heterozygous knockout mice

    OpenAIRE

    Muhia, M; Feldon, J; Knuesel, I.; Yee, B. K.

    2009-01-01

    The synaptic Ras/Rap-GTPase-activating protein (SynGAP) regulates specific intracellular events following N-methyl-d-aspartate receptor (NMDAR) activation. Here, the impact of SynGAP heterozygous knockout (SG+/-) on NMDAR-dependent functions was assessed using different positive reinforcement schedules in instrumental conditioning. The knockout did not affect the temporal control of operant responding under a fixed interval (FI) schedule, but led to a putative enhancement in response vigor an...

  8. Genomic and structural analysis of Syn9, a cyanophage infecting marine Prochlorococcus and Synechococcus.

    Science.gov (United States)

    Weigele, Peter R; Pope, Welkin H; Pedulla, Marisa L; Houtz, Jennifer M; Smith, Alexis L; Conway, James F; King, Jonathan; Hatfull, Graham F; Lawrence, Jeffrey G; Hendrix, Roger W

    2007-07-01

    Cyanobacteriophage Syn9 is a large, contractile-tailed bacteriophage infecting the widespread, numerically dominant marine cyanobacteria of the genera Prochlorococcus and Synechococcus. Its 177,300 bp genome sequence encodes 226 putative proteins and six tRNAs. Experimental and computational analyses identified genes likely involved in virion formation, nucleotide synthesis, and DNA replication and repair. Syn9 shows significant mosaicism when compared with related cyanophages S-PM2, P-SSM2 and P-SSM4, although shared genes show strong purifying selection and evidence for large population sizes relative to other phages. Related to coliphage T4 - which shares 19% of Syn9's genes - Syn9 shows evidence for different patterns of DNA replication and uses homologous proteins to assemble capsids with a different overall structure that shares topology with phage SPO1 and herpes virus. Noteworthy bacteria-related sequences in the Syn9 genome potentially encode subunits of the photosynthetic reaction centre, electron transport proteins, three pentose pathway enzymes and two tryptophan halogenases. These genes suggest that Syn9 is well adapted to the physiology of its photosynthetic hosts and may affect the evolution of these sequences within marine cyanobacteria.

  9. The Uses of Copper and Zinc Aluminates to Capture and Convert Carbon dioxide to Syn-gas at Higher Temperature

    Directory of Open Access Journals (Sweden)

    R.Y. Raskar

    2014-03-01

    Full Text Available The uses of copper and zinc aluminates to capture and convert the CO2 to syn-gas were studied at higher temperatures. The samples of copper and zinc aluminates were prepared by solid-solid fusion method by calcining in air at 900 oC for 3 h. Those samples were characterized by acidity/alkalinity, surface area, XRD pattern, IR, SEM images and screening to capture CO2 at the different temperatures. The phases Cu2O, CuO, ZnO, CuAl2O4 and ZnAl2O4 were found to be in the samples of zinc and copper aluminates. Acidity and surface area of the samples of copper and zinc aluminates were found to be in the ranges from 0.063 to 9.37 mmol g-1 and 3.04 to 11.8 m2 g-1, respectively. The captured CO2 by the samples of copper and zinc aluminates was found to be 19.92 to 31.52 wt% for the temperature range 40 to 850 oC. The captured CO2 at 550 oC by variable Zn/Al and Cu/Al mol ratio from 0.5 to 6 of the samples of copper and zinc aluminates was found to be 12.81 to 18.04 wt%. The reduction of carbon dioxide by zinc and copper aluminates was observed. The conversion of CO2 by methane over variable mol ratio of Cu/Al and Zn/Al in copper and zinc aluminates, respectively, at 500 oC showed the production of syn-gas by using the gas hourly space velocities (GHSV 12000, 12000 and 6000 ml. h-1. g-1 of helium, CO2 and methane. The conversions of CO2 by methane over the samples of zinc and copper aluminates were studied at different mol ratios of CO2 to methane.  © 2014 BCREC UNDIP. All rights reservedReceived: 13rd May 2013; Revised: 8th November 2013; Accepted: 8th November 2013[How to Cite: Raskar, R.Y., Gaikwad, A.G. (2014. The Uses of Copper and Zinc Aluminates to Cap-ture and Convert Carbon Dioxide to Syn-gas at Higher Temperature. Bulletin of Chemical Reaction Engineering & Catalysis, 9 (1: 1-15. (doi:10.9767/bcrec.9.1.4899.1-15[Permalink/DOI: http://dx.doi.org/10.9767/bcrec.9.1.4899.1-15

  10. SYN3D: a single-channel, spatial flux synthesis code for diffusion theory calculations

    Energy Technology Data Exchange (ETDEWEB)

    Adams, C. H.

    1976-07-01

    This report is a user's manual for SYN3D, a computer code which uses single-channel, spatial flux synthesis to calculate approximate solutions to two- and three-dimensional, finite-difference, multigroup neutron diffusion theory equations. SYN3D is designed to run in conjunction with any one of several one- and two-dimensional, finite-difference codes (required to generate the synthesis expansion functions) currently being used in the fast reactor community. The report describes the theory and equations, the use of the code, and the implementation on the IBM 370/195 and CDC 7600 of the version of SYN3D available through the Argonne Code Center.

  11. Synthesis of 2′-Fluoro RNA by Syn5 RNA polymerase

    Science.gov (United States)

    Zhu, Bin; Hernandez, Alfredo; Tan, Min; Wollenhaupt, Jan; Tabor, Stanley; Richardson, Charles C.

    2015-01-01

    The substitution of 2′-fluoro for 2′-hydroxyl moieties in RNA substantially improves the stability of RNA. RNA stability is a major issue in RNA research and applications involving RNA. We report that the RNA polymerase from the marine cyanophage Syn5 has an intrinsic low discrimination against the incorporation of 2′-fluoro dNMPs during transcription elongation. The presence of both magnesium and manganese ions at high concentrations further reduce this discrimination without decreasing the efficiency of incorporation. We have constructed a Syn5 RNA polymerase in which tyrosine 564 is replaced with phenylalanine (Y564F) that further decreases the discrimination against 2′-fluoro-dNTPs during RNA synthesis. Sequence elements in DNA templates that affect the yield of RNA and incorporation of 2′-fluoro-dNMPs by Syn5 RNA polymerase have been identified. PMID:25897116

  12. An Enhanced SYN Cookie Defence Method for TCP DDoS Attack

    Directory of Open Access Journals (Sweden)

    Bo Hang

    2011-08-01

    Full Text Available With the development of network, the issues of network security are rapidly becoming a serious problem, and the Denial of Service (DoS attack has already become the greatest threat to the network. SYN Flood attack is one of the most common distributed denial of service attack way (DDoS. This paper presents an improved SYN Cookie method, designing a novel attack detector processing and a enhanced attack respondor with a new cookie verification algorithm and changing the definition of cookie field, to reduce algorithm complexity with the ensurance of security. The experiment results show that the proposed method provided an average computational complexity reduction of 30% compared with the traditional method. The new method can be an effective defense against the TCP SYN Flood attack with a lower complexity.

  13. A GDF5 point mutation strikes twice--causing BDA1 and SYNS2.

    Directory of Open Access Journals (Sweden)

    Elisa Degenkolbe

    Full Text Available Growth and Differentiation Factor 5 (GDF5 is a secreted growth factor that belongs to the Bone Morphogenetic Protein (BMP family and plays a pivotal role during limb development. GDF5 is a susceptibility gene for osteoarthritis (OA and mutations in GDF5 are associated with a wide variety of skeletal malformations ranging from complex syndromes such as acromesomelic chondrodysplasias to isolated forms of brachydactylies or multiple synostoses syndrome 2 (SYNS2. Here, we report on a family with an autosomal dominant inherited combination of SYNS2 and additional brachydactyly type A1 (BDA1 caused by a single point mutation in GDF5 (p.W414R. Functional studies, including chondrogenesis assays with primary mesenchymal cells, luciferase reporter gene assays and Surface Plasmon Resonance analysis, of the GDF5(W414R variant in comparison to other GDF5 mutations associated with isolated BDA1 (p.R399C or SYNS2 (p.E491K revealed a dual pathomechanism characterized by a gain- and loss-of-function at the same time. On the one hand insensitivity to the main GDF5 antagonist NOGGIN (NOG leads to a GDF5 gain of function and subsequent SYNS2 phenotype. Whereas on the other hand, a reduced signaling activity, specifically via the BMP receptor type IA (BMPR1A, is likely responsible for the BDA1 phenotype. These results demonstrate that one mutation in the overlapping interface of antagonist and receptor binding site in GDF5 can lead to a GDF5 variant with pathophysiological relevance for both, BDA1 and SYNS2 development. Consequently, our study assembles another part of the molecular puzzle of how loss and gain of function mutations in GDF5 affect bone development in hands and feet resulting in specific types of brachydactyly and SYNS2. These novel insights into the biology of GDF5 might also provide further clues on the pathophysiology of OA.

  14. Sedimentology and significance of an early syn-rift paleovalley, Wadi Tayiba, Suez Rift, Egypt

    Science.gov (United States)

    Jackson, Christopher Aiden-Lee

    2008-09-01

    Wadi Tayiba is located along the western margin of the Hammam Faraun fault block, western Sinai, Egypt and is generally thought to contain exposures of the 'type-section' for late pre-rift to early syn-rift stratigraphy associated with the Oligo-Miocene Suez Rift. Previous studies have suggested a complex vertical succession of sedimentary facies characterise the late pre-rift to early syn-rift and imply major and abrupt variations in relative sea-level during this time. Detailed sedimentological and stratigraphic analysis of the Wadi Tayiba type-section presented in this study identifies not only a far simpler vertical facies succession than previously suggested but also the development of a major paleovalley system at the base of the early syn-rift succession. It is suggested that this subtle but significant feature is the cause of the complex vertical facies succession previously interpreted. It is concluded that continuous marine sedimentation and only moderate amplitude variations in relative sea-level occurred during the Eocene to Early Oligocene within at least this part of the Suez Rift. A major relative sea-level fall occurred during the middle Oligocene and a regionally developed erosional surface associated with this event marks the contact between late pre-rift and early syn-rift strata. The results of this study have major implications for sub-regional correlations of late pre-rift to early syn-rift stratigraphic units and resultant palaeogeographic reconstructions of the late pre-rift to early syn-rift period.

  15. BrisSynBio: a BBSRC/EPSRC-funded Synthetic Biology Research Centre.

    Science.gov (United States)

    Sedgley, Kathleen R; Race, Paul R; Woolfson, Derek N

    2016-06-15

    BrisSynBio is the Bristol-based Biotechnology and Biological Sciences Research Council (BBSRC)/Engineering and Physical Sciences Research Council (EPSRC)-funded Synthetic Biology Research Centre. It is one of six such Centres in the U.K. BrisSynBio's emphasis is on rational and predictive bimolecular modelling, design and engineering in the context of synthetic biology. It trains the next generation of synthetic biologists in these approaches, to facilitate translation of fundamental synthetic biology research to industry and the clinic, and to do this within an innovative and responsible research framework. © 2016 The Author(s).

  16. Bimanes (1,5-Diazabicyclo(3.3.0)Octadiendiones). Laser Activity in syn- Bimanes

    Science.gov (United States)

    1990-05-24

    oou InterimzOCRA Technica FROM 6/189T5.3j9 3 a 19 16mitr SUPPLEENTAR NOTATION ONOACESIN Heteroatom Chmitr 22217-0 (99) 11. 7CSTIT icueScrt CastoD n)8...bimanes 1. , 4 LO, 4 26 and i-thia-syn-(methylenemethyl)binane 50: and RE. 0-20 for 26 syn-bimanes. The bimane dyes tended to be more photostable and more ...Boyer, C. M. Lau, I. R. Politzer, K. Thangaraj, G. Kumar, V. T. Ramakrishnan, and T. G. Pavlopoulos Prepared for Publication in the Heteroatom Chemistry

  17. The Applications of Mixed Metal Oxides to Capture the CO2 and Convert to Syn-Gas

    Directory of Open Access Journals (Sweden)

    A. G. Gaikwad

    2015-01-01

    Full Text Available AbstractThe applicationsof different mixed metal oxides were explored for the capture of CO2and convert of CO2 to syn-gas. The several samples of the mixedmetal oxides were prepared by the sol gel, solid-solid fusion, precipitation,molten salt and template methods in order to investigate the performance ofmixed mtal oxides to the CO2 applications. These samples werecalcined for the 3h in air at 900 oC. The mixed metal oxides sampleswere characterized by acidity/ basicity, surface area, XRD pattern, SEM imagesand to capture CO2. The basicity and surface area of the samples of mixedmetal oxides were found to be in the range from 0.7 to 15.7 mmol g-1and 2.24 to 138.76 m2 g-1, respectively. The obtainedresults of prepared mixed metal oxides by different method were compared forthe purpose of searching the efficient materials. The temperature profiles of thecaptured CO2 by the samples of mixed metal oxides were obtained inthe range 100 to 800 oC. The captured CO2 was found to bein the range from 7.36 to 26.93 wt%. The conversions of CO2 bymethane were explored to syn-gas over the mixed metal oxides including the calciumiron lanthanum mixed metal oxides and Pd (5 wt %/Al2O3at 700 oC with the gas hourly space velocities (GHSV 6000 ml h-1g-1 of methane, 6000 ml h-1 g-1 of CO2and 24000 ml h-1 g-1 of helium.

  18. 40 CFR 174.529 - Bacillus thuringiensis modified Cry1Ab protein as identified under OECD Unique Identifier SYN...

    Science.gov (United States)

    2010-07-01

    ... protein as identified under OECD Unique Identifier SYN-IR67B-1 in cotton; exemption from the requirement... Tolerance Exemptions § 174.529 Bacillus thuringiensis modified Cry1Ab protein as identified under OECD... Bacillus thuringiensis modified Cry1Ab protein as identified under OECD Unique Identifier SYN-IR67B-1 are...

  19. Grundtvigs syn på jødedom og jøder i dansk kontekst

    DEFF Research Database (Denmark)

    Lausten, Martin Schwarz

    2013-01-01

    Grundtvig og jødefejderne 1813-1830. Historie og teologi i Grundtvigs syn på jødedom og jøder. Grundtvig og debatten om jødernes politiske og sociale rettigheder, og hans syn på mission blandt jøder og jøders konversion til kristendom...

  20. A first step beyond traditional boundaries: destination therapy with the SynCardia total artificial heart.

    Science.gov (United States)

    Spiliopoulos, Sotirios; Koerfer, Reiner; Tenderich, Gero

    2014-06-01

    The SynCardia total artificial heart is currently used as a bridge to transplantation therapy in cases of irreversible, acute or chronic, biventricular heart failure. We describe the implementation of this technology in the context of destination therapy in a patient with an end-stage heart failure on grounds of primary amyloidosis.

  1. Role of Human DNA Polymerase kappa in Extension Opposite from a cis-syn Thymine Dimer

    Energy Technology Data Exchange (ETDEWEB)

    R Vasquez-Del Carpio; T Silverstein; S Lone; R Johnson; L Prakash; S Prakash; A Aggarwal

    2011-12-31

    Exposure of DNA to UV radiation causes covalent linkages between adjacent pyrimidines. The most common lesion found in DNA from these UV-induced linkages is the cis-syn cyclobutane pyrimidine dimer. Human DNA polymerase {Kappa} (Pol{Kappa}), a member of the Y-family of DNA polymerases, is unable to insert nucleotides opposite the 3'T of a cis-syn T-T dimer, but it can efficiently extend from a nucleotide inserted opposite the 3'T of the dimer by another DNA polymerase. We present here the structure of human Pol{Kappa} in the act of inserting a nucleotide opposite the 5'T of the cis-syn T-T dimer. The structure reveals a constrained active-site cleft that is unable to accommodate the 3'T of a cis-syn T-T dimer but is remarkably well adapted to accommodate the 5'T via Watson-Crick base pairing, in accord with a proposed role for Pol{Kappa} in the extension reaction opposite from cyclobutane pyrimidine dimers in vivo.

  2. SynBioLGDB: a resource for experimentally validated logic gates in synthetic biology

    Science.gov (United States)

    Wang, Liqiang; Qian, Kun; Huang, Yan; Jin, Nana; Lai, Hongyan; Zhang, Ting; Li, Chunhua; Zhang, Chunrui; Bi, Xiaoman; Wu, Deng; Wang, Changliang; Wu, Hao; Tan, Puwen; Lu, Jianping; Chen, Liqun; Li, Kongning; Li, Xia; Wang, Dong

    2015-01-01

    Synthetic biologists have developed DNA/molecular modules that perform genetic logic operations in living cells to track key moments in a cell's life or change the fate of a cell. Increasing evidence has also revealed that diverse genetic logic gates capable of generating a Boolean function play critically important roles in synthetic biology. Basic genetic logic gates have been designed to combine biological science with digital logic. SynBioLGDB (http://bioinformatics.ac.cn/synbiolgdb/) aims to provide the synthetic biology community with a useful resource for efficient browsing and visualization of genetic logic gates. The current version of SynBioLGDB documents more than 189 genetic logic gates with experimental evidence involving 80 AND gates and 16 NOR gates, etc. in three species (Human, Escherichia coli and Bacillus clausii). SynBioLGDB provides a user-friendly interface through which conveniently to query and browse detailed information about these genetic logic gates. SynBioLGDB will enable more comprehensive understanding of the connection of genetic logic gates to execute complex cellular functions in living cells.

  3. A fuzzy logic based network intrusion detection system for predicting the TCP SYN flooding attack

    CSIR Research Space (South Africa)

    Mkuzangwe, Nenekazi NP

    2017-04-01

    Full Text Available presents a fuzzy logic based network intrusion detection system to predict neptune which is a type of a Transmission Control Protocol Synchronized (TCP SYN) flooding attack. The performance of the proposed fuzzy logic based system is compared to that of a...

  4. Species boundaries and nomenclature of Rhizopus arrhizus (syn. R. oryzae).

    Science.gov (United States)

    Dolatabadi, Somayeh; de Hoog, G Sybren; Meis, Jacques F; Walther, Grit

    2014-12-01

    Rhizopus arrhizus (Mucorales, Mucoromycotina) is the prevalent opportunist worldwide among the mucoralean species causing human infections. On the other hand the species has been used since ancient times to ferment African and Asian traditional foods and condiments based on ground soybeans. As producer of organic acids and hydrolytic enzymes it is widely applied in food industry and biotechnology. Using a set of 82 strains we studied phylogenetic and biological species boundaries within Rhizopus arrhizus s.l. to test the taxonomic status of R. delemar that was recently separated from R. arrhizus. Sequence analyses based on the internal transcribed spacer region, the gene of the largest subunit of the RNA polymerase II, a part of the actin gene, and the translation elongation factor 1-α as well as amplified fragment length polymorphism analysis were performed. Phenotypic characters such as enzyme profiles and growth kinetics were examined and the mating behavior was tested. Molecular analyses supported the existence of two phylogenetic species. However, the results of the mating test suggest that the mating barrier is still not complete. No physiological, ecological or epidemiological distinction could be found beside the difference in the production of organic acids. Consequently the status of varieties is proposed for the two phylogenetic species. Because the description of the first described R. arrhizus is considered to be conclusive we recommend the use of Rhizopus arrhizus var. arrhizus and var. delemar.

  5. Comparison of Leishmania killicki (syn. L. tropica) and Leishmania tropica Population Structure in Maghreb by Microsatellite Typing.

    Science.gov (United States)

    Chaara, Dhekra; Bañuls, Anne-Laure; Haouas, Najoua; Talignani, Loïc; Lami, Patrick; Mezhoud, Habib; Harrat, Zoubir; Dedet, Jean-Pierre; Babba, Hamouda; Pratlong, Francine

    2015-12-01

    Leishmania (L.) killicki (syn. L. tropica), which causes cutaneous leishmaniasis in Maghreb, was recently described in this region and identified as a subpopulation of L. tropica. The present genetic analysis was conducted to explore the spatio-temporal distribution of L. killicki (syn. L. tropica) and its transmission dynamics. To better understand the evolution of this parasite, its population structure was then compared with that of L. tropica populations from Morocco. In total 198 samples including 85 L. killicki (syn. L. tropica) (from Tunisia, Algeria and Libya) and 113 L. tropica specimens (all from Morocco) were tested. Theses samples were composed of 168 Leishmania strains isolated from human skin lesions, 27 DNA samples from human skin lesion biopsies, two DNA samples from Ctenodactylus gundi bone marrow and one DNA sample from a Phlebotomus sergenti female. The sample was analyzed by using MultiLocus Enzyme Electrophoresis (MLEE) and MultiLocus Microsatellite Typing (MLMT) approaches. Analysis of the MLMT data support the hypothesis that L. killicki (syn. L. tropica) belongs to the L. tropica complex, despite its strong genetic differentiation, and that it emerged from this taxon by a founder effect. Moreover, it revealed a strong structuring in L. killicki (syn. L. tropica) between Tunisia and Algeria and within the different Tunisian regions, suggesting low dispersion of L. killicki (syn. L. tropica) in space and time. Comparison of the L. tropica (exclusively from Morocco) and L. killicki (syn. L. tropica) population structures revealed distinct genetic organizations, reflecting different epidemiological cycles.

  6. Comparison of Leishmania killicki (syn. L. tropica and Leishmania tropica Population Structure in Maghreb by Microsatellite Typing.

    Directory of Open Access Journals (Sweden)

    Dhekra Chaara

    2015-12-01

    Full Text Available Leishmania (L. killicki (syn. L. tropica, which causes cutaneous leishmaniasis in Maghreb, was recently described in this region and identified as a subpopulation of L. tropica. The present genetic analysis was conducted to explore the spatio-temporal distribution of L. killicki (syn. L. tropica and its transmission dynamics. To better understand the evolution of this parasite, its population structure was then compared with that of L. tropica populations from Morocco. In total 198 samples including 85 L. killicki (syn. L. tropica (from Tunisia, Algeria and Libya and 113 L. tropica specimens (all from Morocco were tested. Theses samples were composed of 168 Leishmania strains isolated from human skin lesions, 27 DNA samples from human skin lesion biopsies, two DNA samples from Ctenodactylus gundi bone marrow and one DNA sample from a Phlebotomus sergenti female. The sample was analyzed by using MultiLocus Enzyme Electrophoresis (MLEE and MultiLocus Microsatellite Typing (MLMT approaches. Analysis of the MLMT data support the hypothesis that L. killicki (syn. L. tropica belongs to the L. tropica complex, despite its strong genetic differentiation, and that it emerged from this taxon by a founder effect. Moreover, it revealed a strong structuring in L. killicki (syn. L. tropica between Tunisia and Algeria and within the different Tunisian regions, suggesting low dispersion of L. killicki (syn. L. tropica in space and time. Comparison of the L. tropica (exclusively from Morocco and L. killicki (syn. L. tropica population structures revealed distinct genetic organizations, reflecting different epidemiological cycles.

  7. 沙生蜡菊花中的黄酮类成分%Flavones from Helichrysi flos SYN.

    Institute of Scientific and Technical Information of China (English)

    刘文娟; 吴立军

    2009-01-01

    目的:沙生蜡菊花的化学成分研究.方法:采用多种色谱方法(硅胶柱色谱、ODS柱色谱和HPLC柱色谱)分离纯化,依据理化性质、波谱数据分析进行结构鉴定.结果:从沙生蜡菊花的甲醇提取物中分离得到7个黄酮类化合物,分别鉴定为槲皮素-3-O-β-D-吡喃葡萄糖苷(quercetin-3-O-β-D-glucopyranoside,1),芹菜素-7-O-β-D-龙胆二糖苷(apigenin 7-O-β-D-gen-tiobioside,2),槲皮素3-O-芸香糖苷(quercetin 3-O-rutinoside,3),芹菜素-7,4'-二-O-葡萄糖苷(apigenin-7,4'-di-O-β-D-glucopyranasideside,4),山柰酚-3,4'-二-O-葡萄糖苷(kaempferol-3,4'-di-O-β-D-glucopyranoside,5),槲皮素-3,3'-O-二葡萄糖(quercetin-3,3'-di-O-β-D-glucopyranaside,6),芹菜素-7-O-β-D-葡萄糖醛酸甲酯(apigenin-7-O-β-D-glucopyranosiduronic acid methyl ester,7).结论:化合物2,4~7为首次从该属植物中分离得到.%Objective:To study the chemical constituents of Helichrysi flos syn.Method:The chemical constituents were isolated by various methods of isolation(silica gel,ODS column chromatography and HPLC)and their structure were elucidated by the analysis of spectral data and chemical properties.Result:Seven flavone compounds were isolated from the MeOH extract of Helichrysi flos syn.The chemical structures were elucidated as quercetin-3-O-β-D-glucopyranoside(1),apigenin-7-O-β-D-gentiobioside(2),quercetin-3-O-rutinoside(3),apigenin-7,4'-di-O-β-D-glucopyranoside(4),kaempferol-3,4'-di-O-β-D-glucopyranoside(5),quercetin-3,3'-di-O-β-D-glucopyranoside(6),apigenin-7-O-β-D-glucopyranosiduronic acid methyl ester(7).Conclusion:Compounds 2,4-7 were obtained from the genus Helichrysum.for the first time.

  8. Expanding Applicability of Total Artificial Heart Therapy: The 50-cc SynCardia Total Artificial Heart.

    Science.gov (United States)

    Spiliopoulos, Sotirios; Dimitriou, Alexandros Merkourios; Guersoy, Dilek; Koerfer, Reiner; Tenderich, Gero

    2015-09-01

    The 50-cc SynCardia total artificial heart is designed to facilitate orthotopic replacement of the native ventricles in patients with a body surface area below 1.7 m(2) in need of long-term circulatory support as a result of end-stage biventricular heart failure. We describe the implementation of this technology in a female patient with irreversible cardiogenic shock on the grounds of acute myocardial infarction and chronic ischemic cardiomyopathy.

  9. 对TCP SYN Flood攻击和防御的分析

    Institute of Scientific and Technical Information of China (English)

    聂涛

    2006-01-01

    TCP SYN Flood(TCP同步洪水攻击)是目前最流行的DoS(拒绝服务攻击)与DDoS的方式之一,这是一种利用TCP协议缺陷,破坏TCP三次握手建立正常连接,从而使得被攻击方资源耗尽的攻击方式。

  10. Synthesis of Transient Climate Evolution of the last 21-kyr (SynTraCE-21)

    Energy Technology Data Exchange (ETDEWEB)

    Zhengyu Liu

    2011-05-06

    Climate evolution in the last 21,000 years provides critical observations for testing state-of-the-art climate models on the simulation of climate evolution and abrupt climate changes. Proxy evidences and new modeling activities have led to rapid advances in our understanding of climate change for this past time period. This funding helps to support the first international SynTraCE-21k workshop at Mount Hood, Oregon from 10-13 October, 2010.

  11. Intracellular assembly of cyanophage Syn5 proceeds through a scaffold-containing procapsid.

    Science.gov (United States)

    Raytcheva, Desislava A; Haase-Pettingell, Cameron; Piret, Jacqueline M; King, Jonathan A

    2011-03-01

    Syn5 is a marine cyanophage that is propagated on the marine photosynthetic cyanobacterial strain Synechococcus sp. WH8109 under laboratory conditions. Cryoelectron images of this double-stranded DNA (dsDNA) phage reveal an icosahedral capsid with short tail appendages and a single novel hornlike structure at the vertex opposite the tail. Despite the major impact of cyanophages on life in the oceans, there is limited information on cyanophage intracellular assembly processes within their photosynthetic hosts. The one-step growth curve of Syn5 demonstrated a short cycle with an eclipse period of ∼45 min, a latent phase of ∼60 min, and a burst size of 20 to 30 particles per cell at 28°C. SDS-PAGE and Western blot analysis of cell lysates at different times after infection showed the synthesis of major virion proteins and their increase as the infection progressed. The scaffolding protein of Syn5, absent from virions, was identified in the lysates and expressed from the cloned gene. It migrated anomalously on SDS-PAGE, similar to the phage T7 scaffolding protein. Particles lacking DNA but containing the coat and scaffolding proteins were purified from Syn5-infected cells using CsCl centrifugation followed by sucrose gradient centrifugation. Electron microscopic images of the purified particles showed shells lacking condensed DNA but filled with protein density, presumably scaffolding protein. These findings suggest that the cyanophages form infectious virions through the initial assembly of scaffolding-containing procapsids, similar to the assembly pathways for the enteric dsDNA bacteriophages. Since cyanobacteria predate the enteric bacteria, this procapsid-mediated assembly pathway may have originated with the cyanophages.

  12. QTL Mapping of Low-Temperature Germination Ability in the Maize IBM Syn4 RIL Population

    OpenAIRE

    Shuaidong Hu; Thomas Lübberstedt; Guangwu Zhao; Michael Lee

    2016-01-01

    Low temperature is the primary factor to affect maize sowing in early spring. It is, therefore, vital for maize breeding programs to improve tolerance to low temperatures at seed germination stage. However, little is known about maize QTL involved in low-temperature germination ability. 243 lines of the intermated B73×Mo17 (IBM) Syn4 recombinant inbred line (RIL) population was used for QTL analysis of low-temperature germination ability. There were significant differences in germination-rela...

  13. The role of pH in Tuber aestivum syn. uncinatum mycorrhiza development within commercial orchards

    Directory of Open Access Journals (Sweden)

    Paul W. Thomas

    2013-12-01

    Full Text Available The accepted advice when establishing a plantation of Tuber aestivum syn. uncinatum is that young inoculated trees should be planted on calcareous soils with a naturally high pH level. When a site is employed that has a naturally low pH level, lime is often applied to raise the pH to a considered ideal level of c.7.5. However, this may not be the correct approach. Here we present data from 33 data points taken from commercial truffle orchards in England, UK. Soil pH is correlated to Tuber aestivum syn. uncinatum mycorrhiza survivorship and development. The optimal observed pH was 7.51 but the actual optimal pH for cultivation may be higher. Sub optimal pH levels lead to a reduction of Tuber aestivum syn. uncinatum mycorrhiza. This reduction is not permanent and mycorrhization levels may be improved within a 12 month period by amending the soil pH. The importance of understanding the interaction of pH with other variables and the results in relation truffle cultivation are discussed.

  14. AutoSyn:A new approach to automated synthesis of composite web services with correctness guarantee

    Institute of Scientific and Technical Information of China (English)

    HUAI JinPeng; DENG Ting; LI XianXian; DU ZongXia; GUO HuiPeng

    2009-01-01

    How to compose existing web services automatically and to guarantee the correctness of the design (e.g.freeness of deadlock and unspecified reception,and temporal constraints) is an important and challenging problem in web services.Most existing approaches require a detailed specification of the desired behaviors of a composite service beforehand and then perform certain formal verification to guarantee the correctness of the design,which makes the composition process both complex and time-consuming.In this paper,we propose a novel approach,referred to as AutoSyn to compose web services,where the correctness is guaranteed in the synthesis process.For a given set of services,a composite service is automatically constructed based on L* algorithm,which guarantees that the composite service is the most general way of coordinating services so that the correctness is ensured.We show the soundness and completeness of our solution and give a set of optimization techniques for reducing the time consumption.We have implemented a prototype system of AutoSyn and evaluated the effectiveness and efficiency of AutoSyn through an experimental study.

  15. SynQor100A半砖DC/DC转换器

    Institute of Scientific and Technical Information of China (English)

    周慧

    2004-01-01

    <正> 日前,SynQor公司推出大电流、高效率的半砖DC/DC转换器。PowerQor Peta系列在单板上输出电流高达100A,采用开放框架封装。Peta系列转换器采用同步整流及SynQor公司的专利拓扑,从而使转换器的1.5Vout效率达到非常高的水平,在输出电流50A和100A时分别为90%和84%。 100A Peta系列扩充了SynQor的Kilo、mega、Giga、Tera半砖、四分之一砖、八分之一砖模块等众多广受嘉奖的产品,从而能为15A~100A的高效率转换器提供更多选择,更加适合各种电源应用。

  16. Two novel proteins of cyanophage Syn5 compose its unusual horn structure.

    Science.gov (United States)

    Raytcheva, Desislava A; Haase-Pettingell, Cameron; Piret, Jacqueline; King, Jonathan A

    2014-02-01

    The marine cyanophage Syn5 can be propagated to a high titer in the laboratory on marine photosynthetic Synechococcus sp. strain WH8109. The purified particles carry a novel slender horn structure projecting from the vertex opposite the tail vertex. The genome of Syn5 includes a number of genes coding for novel proteins. Using immune-electron microscopy with gold-labeled antibodies, we show that two of these novel proteins, products of genes 53 and 54, are part of the horn structure. A third novel protein, the product of gene 58, is assembled onto the icosahedral capsid lattice. Characterization of radioactively labeled precursor procapsids by sucrose gradient centrifugation shows that there appear to be three classes of particles-procapsids, scaffold-deficient procapsids, and expanded capsids. These lack fully assembled horn appendages. The horn presumably assembles onto the virion just before or after DNA packaging. Antibodies raised to the recombinant novel Syn5 proteins did not interfere with phage infectivity, suggesting that the functions of these proteins are not directly involved in phage attachment or infection of the host WH8109. The horn structure may represent some adaption to the marine environment, whose function will require additional investigation.

  17. Appetitively motivated instrumental learning in SynGAP heterozygous knockout mice.

    Science.gov (United States)

    Muhia, Mary; Feldon, Joram; Knuesel, Irene; Yee, Benjamin K

    2009-10-01

    The synaptic Ras/Rap-GTPase-activating protein (SynGAP) regulates specific intracellular events following N-methyl-d-aspartate receptor (NMDAR) activation. Here, the impact of SynGAP heterozygous knockout (SG+/-) on NMDAR-dependent functions was assessed using different positive reinforcement schedules in instrumental conditioning. The knockout did not affect the temporal control of operant responding under a fixed interval (FI) schedule, but led to a putative enhancement in response vigor and/or disinhibition. When examined on differential reinforcement of low rates of response (DRL) schedules, SG+/- mice showed increased responding under DRL-4s and DRL-8s, without impairing the response efficiency (total rewards/total lever presses) because both rewarded and nonrewarded presses were elevated. Motivation was unaffected as evaluated using a progressive ratio (PR) schedule. Yet, SG+/- mice persisted in responding during extinction at the end of PR training, although an equivalent phenotype was not evident in extinction learning following FI-20s training. This extinction phenotype is therefore schedule-specific and cannot be generalized to Pavlovian conditioning. In conclusion, constitutive SynGAP reduction increases vigor in the execution of learned operant behavior without compromising its temporal control, yielding effects readily distinguishable from NMDAR blockade.

  18. Rosebud syncoal partnership SynCoal{sup {reg_sign}} demonstration technology development update

    Energy Technology Data Exchange (ETDEWEB)

    Sheldon, R.W. [Rosebud SynCoal Company, Billings, MT (United States); Heintz, S.J. [Department of Energy, Pittsburgh, PA (United States)

    1995-12-01

    Rosebud SynCoal{reg_sign} Partnership`s Advanced Coal Conversion Process (ACCP) is an advanced thermal coal upgrading process coupled with physical cleaning techniques to upgrade high moisture, low-rank coals to produce a high-quality, low-sulfur fuel. The coal is processed through two vibrating fluidized bed reactors where oxygen functional groups are destroyed removing chemically bound water, carboxyl and carbonyl groups, and volatile sulfur compounds. After thermal upgrading, the SynCoal{reg_sign} is cleaned using a deep-bed stratifier process to effectively separate the pyrite rich ash. The SynCoal{reg_sign} process enhances low-rank western coals with moisture contents ranging from 2555%, sulfur contents between 0.5 and 1.5 %, and heating values between 5,500 and 9,000 Btu/lb. The upgraded stable coal product has moisture contents as low as 1 %, sulfur contents as low as 0.3%, and heating values up to 12,000 Btu/lb.

  19. SynTec Final Technical Report: Synthetic biology for Tailored Enzyme cocktails

    Energy Technology Data Exchange (ETDEWEB)

    Lin, Janine [Novozymes, Inc., Davis, CA (United States); Teter, Sarah [Novozymes, Inc., Davis, CA (United States)

    2016-06-30

    Using a novel enzyme screening method inspired by synthetic biology, Novozymes developed new technology under SynTec which allows for more rapidly tailoring of enzyme cocktails. The methodology can be applied to specific feedstocks, and or coupled to address a specific hydrolytic conversion process context. Using combinatorial high throughput screening of libraries of enzyme domains, we can quickly assess which combination of catalytic modules delivers the best performance for a specific condition. To demonstrate the effectiveness of the screening process, we measured performance of the output catalytic cocktail compared to CTec3/HTec3. SynTec benchmark cocktail - blend of Cellic® CTec3 and HTec3. The test substrate was - ammonia fiber expansion pretreated corn stover (AFEX™ PCS).CTec3/HTec3 was assayed at the optimal pH and temperature, and also in the absence of any pH adjustment. The new enzyme cocktail discovered under SynTec was assayed in the absence of any pH adjustment and at the optimal temperature. Conversion is delivered by SynTec enzyme at significant dose reduction relative to CTec3/HTec3 at the controlled pH optimum, and without titrant required to maintain pH, which delivers additional cost savings relative to current state of the art process. In this 2.5 year $4M project, the team delivered an experimental cocktail that significantly outperformed CTec3/HTec3 for a specific substrate, and for specific hydrolysis conditions. As a means of comparing performance improvement delivered per research dollar spent, we note that SynTec delivered a similar performance improvement to the previous award, in a shorter time and with fewer resources than for the previously successful DOE project DECREASE, a 3.5 year, $25M project, though this project focused on a different substrate and used different hydrolysis conditions. The newly implemented technology for rapid sourcing of new cellulases and hemicellulases from nature is an example of Novozymes

  20. Comparison of Leishmania killicki (syn. L. tropica) and Leishmania tropica Population Structure in Maghreb by Microsatellite Typing.

    OpenAIRE

    Dhekra Chaara; Anne-Laure Bañuls; Najoua Haouas; Loïc Talignani; Patrick Lami; Habib Mezhoud; Zoubir Harrat; Jean-Pierre Dedet; Hamouda Babba; Francine Pratlong

    2015-01-01

    Leishmania (L.) killicki (syn. L. tropica), which causes cutaneous leishmaniasis in Maghreb, was recently described in this region and identified as a subpopulation of L. tropica. The present genetic analysis was conducted to explore the spatio-temporal distribution of L. killicki (syn. L. tropica) and its transmission dynamics. To better understand the evolution of this parasite, its population structure was then compared with that of L. tropica populations from Morocco. In total 198 samples...

  1. Detection of SYN Flooding Attacks Based on Non-parametric CUSUM Algorithm%基于非参数CUSUM算法的SYN Flooding攻击检测

    Institute of Scientific and Technical Information of China (English)

    程军; 林白; 芦建芝; 李鸥

    2006-01-01

    针对危害性极大的SYN Flooding攻击,提出了一种新的检测方法.该方法监控进入网络的TCP业务的SYN包与FIN(RsT)包的平衡性,并使用非参数累积和(CUSUM)算法来检测SYN包与FIN(RST)包数量的均衡性的变化.该方法不需要正常业务和攻击业务的详细模型,能提高检测的准确性和在线检测速度,降低运算开销.

  2. Three Syns.

    Science.gov (United States)

    Larsen, Richard B.

    1986-01-01

    Introduces three terms--synapsis, synesthesia, and synergy--applied to writing instruction as heuristic concepts. Describes classroom exercises, such as removing transitions from an essay and asking students to restore synaptic life to the paragraphs, viewing painting masterpieces to find analogous aesthetic concepts in written composition, and…

  3. SynLethDB: synthetic lethality database toward discovery of selective and sensitive anticancer drug targets.

    Science.gov (United States)

    Guo, Jing; Liu, Hui; Zheng, Jie

    2016-01-04

    Synthetic lethality (SL) is a type of genetic interaction between two genes such that simultaneous perturbations of the two genes result in cell death or a dramatic decrease of cell viability, while a perturbation of either gene alone is not lethal. SL reflects the biologically endogenous difference between cancer cells and normal cells, and thus the inhibition of SL partners of genes with cancer-specific mutations could selectively kill cancer cells but spare normal cells. Therefore, SL is emerging as a promising anticancer strategy that could potentially overcome the drawbacks of traditional chemotherapies by reducing severe side effects. Researchers have developed experimental technologies and computational prediction methods to identify SL gene pairs on human and a few model species. However, there has not been a comprehensive database dedicated to collecting SL pairs and related knowledge. In this paper, we propose a comprehensive database, SynLethDB (http://histone.sce.ntu.edu.sg/SynLethDB/), which contains SL pairs collected from biochemical assays, other related databases, computational predictions and text mining results on human and four model species, i.e. mouse, fruit fly, worm and yeast. For each SL pair, a confidence score was calculated by integrating individual scores derived from different evidence sources. We also developed a statistical analysis module to estimate the druggability and sensitivity of cancer cells upon drug treatments targeting human SL partners, based on large-scale genomic data, gene expression profiles and drug sensitivity profiles on more than 1000 cancer cell lines. To help users access and mine the wealth of the data, we developed other practical functionalities, such as search and filtering, orthology search, gene set enrichment analysis. Furthermore, a user-friendly web interface has been implemented to facilitate data analysis and interpretation. With the integrated data sets and analytics functionalities, SynLethDB would

  4. rac-syn-Diethyl 2-hydroxy-4-oxo-1-phenylcyclohexane-1,2-dicarboxylate

    Directory of Open Access Journals (Sweden)

    Ya-Jun Wang

    2011-11-01

    Full Text Available The title compound, C18H22O6, was obtained by the domino oxa–Michael–aldol (DOMA reaction and has the cyclohexanone ring in a chair conformation with intra-annular torsion angles in the range 49.9 (2–58.9 (2°. The two ethoxycarbonyl substituents on the cyclohexanone ring adopt a syn configurations. In the crystal, the molecules self-assemble through duplex intermolecular hydroxy–carbonyl O—H...O hydrogen bonds, giving centrosymmetric cyclic dimers [graph set R22(12] which inter-associate through weak C—H...O hydrogen-bonding interactions.

  5. Target Specific Tactics in Olefin Metathesis: Synthetic Approach to cis-syn-cis-Triquinanes and -Propellanes.

    Science.gov (United States)

    Kotha, Sambasivarao; Aswar, Vikas R

    2016-04-15

    A concise and simple synthetic approach to cis-syn-cis-triquinanes and -propellanes has been demonstrated via olefin metathesis starting with exo-nadic anhydride. This approach involves a ring-opening and ring-closing metathesis sequence of norbornene derivatives using Grubb's catalyst. Early-stage diallylation of norbornene derivatives is demonstrated followed by ring-closing metathesis that delivers propellanes exclusively. Surprisingly, ring-opening metathesis, late-stage diallylation, followed by ring-closing metathesis delivers triquinane as well as propellane derivatives.

  6. Astrocyte-specific disruption of SynCAM1 signaling results in ADHD-like behavioral manifestations.

    Directory of Open Access Journals (Sweden)

    Ursula S Sandau

    Full Text Available SynCAM1 is an adhesion molecule involved in synaptic differentiation and organization. SynCAM1 is also expressed in astroglial cells where it mediates astrocyte-to astrocyte and glial-neuronal adhesive communication. In astrocytes, SynCAM1 is functionally linked to erbB4 receptors, which are involved in the control of both neuronal/glial development and mature neuronal and glial function. Here we report that mice carrying a dominant-negative form of SynCAM1 specifically targeted to astrocytes (termed GFAP-DNSynCAM1 mice exhibit disrupted diurnal locomotor activity with enhanced and more frequent episodes of activity than control littermates during the day (when the animals are normally sleeping accompanied by shorter periods of rest. GFAP-DNSynCAM1 mice also display high levels of basal activity in the dark period (the rodent's awake/active time that are attenuated by the psychostimulant D,L-amphetamine, and reduced anxiety levels in response to both avoidable and unavoidable provoking stimuli. These results indicate that disruption of SynCAM1-dependent astroglial function results in behavioral abnormalities similar to those described in animals model of attention-deficit hyperactive disorder (ADHD, and suggest a hitherto unappreciated contribution of glial cells to the pathophysiology of this disorder.

  7. Formation and syn-rifting process of the Wan'an Basin,South China Sea

    Institute of Scientific and Technical Information of China (English)

    LU Caili; YAO Yongjian; WU Shiguo; DONG Dongdong

    2013-01-01

    Based on seismic and drilling data,we calculated tectonic subsidence amounts and rates of the Wan'an Basin by backstripping.The genetic mechanism and syn-rifting process of the basin were analyzed in combination with the regional geological setting.The results reveal that the basin syn-rifted in the Eocene and early Miocene under the control of the dextral strike-slip Wan'an Fault Zone.The transtensional/extentional stresses along this fault zone may be attributed to seafloor spreading of the South China Sea (SCS) in multiple episodes.Extensive basal faults and some small initial rifts in the early Paleogene can be related to southeastward extrusion and clockwise rotation of the Indochina Block.During the Oligocene,the nearly N-S directed spreading of the SCS derived the transtensional stresses in a roughly NW-SE orientation.The basin subsided rapidly in the middle and north to form two major subsidence centers.In the early Miocene,the SCS spread again in a nearly NW-SE direction,resulting in rapid subsidence in the southern basin continuous extending until the period ~ 16.3 Ma.

  8. Novel illudins from Coprinopsis episcopalis (syn. Coprinus episcopalis), and the distribution of illudin-like compounds among filamentous fungi.

    Science.gov (United States)

    Gonzalez del Val, Antonio; Platas, Gonzalo; Arenal, Francisco; Orihuela, Juan Carlos; Garcia, María; Hernández, Pilar; Royo, Inmaculada; De Pedro, Nuria; Silver, Lynn L; Young, Katherine; Vicente, María Francisca; Pelaez, Fernando

    2003-10-01

    The illudins are a family of fungal sesquiterpenes that have been studied as anti-tumor agents, and they also have antibacterial activity. Over a four-year period, 25 304 fungal isolates (approximately 97% ascomycetes and 3% basidiomycetes), were screened for antibacterial activity against methicillin-resistant Staphylococcus aureus. Illudin-like compounds with antibacterial and cytotoxic activity against tumor cell lines were observed in 10 basidiomycete strains. The isolates were recovered from different types of substrata using indirect methods and only formed sterile mycelia in pure culture. The isolates were genetically related but not identical, based on PCR-based fingerprinting techniques. DNA sequencing of the ITS1-5.8 S-ITS2 region of the strains revealed that nine had identical sequences, indicating that they were conspecific. The sequence of the remaining isolate was 96.34% similar, suggesting that it was a closely related species. The D1-D2 region of the 25 S rRNA gene of the two strain types was also sequenced. Both sequences were 99.39% similar, and Coprinopsis gonophylla (syn. Coprinus gonophyllus) was the closest match for both. Strains were grown in pure culture on a rice-based medium that allowed the development of basidiomata from one culture of the main strain type, which was identified as C. episcopalis, a close relative of C. gonophyllus. Both species (or strain types) produced different types of illudin-like compounds. Three novel illudins (I, I2 and J2) were found to be produced by the cultures identified as C. episcopalis, while only illudinic acid was produced by the other Coprinopsis sp. The taxonomical relationships of the Coprinops is species identified in this study with other illudin producers previously reported in the literature are discussed.

  9. Budgettets rolle: Skal vi ændre vores syn på budgetter og motivation

    DEFF Research Database (Denmark)

    Sandalgaard, Niels; Bukh, Per Nikolaj

    2008-01-01

    relation til budgetopfølgningen. Formålet er at vurdere, om den måde, budgettering traditionelt håndterer motivation på, er hensigtsmæssig, eller om der er behov for et ændret syn på budgetter og motivation. Artiklen tager udgangspunktet i den normative litteratur på området, og det påpeges...... af den kritik af budgettet, der har været rejst de senere år f.eks. i forbindelse med Beyond Budgeting-modellen, der bl.a. har udgangspunkt i de klassiske motivationsteorier. I forlængelse heraf diskuteres de motivationsmæssige elementer i Beyond Budgeting, og det påpeges, at også denne model...

  10. An Analysis of Sawtooth Noise in the Timing SynPaQ III GPS Sensor

    Directory of Open Access Journals (Sweden)

    Yuriy S. SHMALIY

    2007-05-01

    Full Text Available This paper addresses a probabilistic analysis of sawtooth noise in the one pulse per second (1PPS output of the timing SynPaQ III GPS Sensor. We show that sawtooth noise is uniformly distributed within the bounds caused by period of the Local Time Clock of the sensor and that the probability density function (pdf of this noise is formed with 1ns sampling interval used in the sensor to calculate the negative sawtooth. We also show that the pdf has at zero a spike of 1ns width caused by roll-off. It is demonstrated that an unbiased finite impulse response filter is an excellent suppresser of such a noise in the estimates of the time interval errors of local clocks.

  11. The transporter SynPAM71 is located in the plasma membrane and thylakoids, and mediates manganese tolerance in Synechocystis PCC6803

    DEFF Research Database (Denmark)

    Gandini, Chiara; Schmidt, Sidsel Birkelund; Husted, Søren

    2017-01-01

    symptoms were observed in WT cells exposed to excess Mn. Moreover, CyanoP, which is involved in the early steps of PSII assembly, is massively upregulated in ΔSynPAM71. SynPAM71 was detected in both the plasma membrane and, to a lesser extent, the thylakoid membranes. Our results suggest that SynPAM71...... to chloroplast Mn homeostasis in Arabidopsis thaliana. Here, we characterize the function of its homolog in Synechocystis (SynPAM71). We used a loss-of-function line (ΔSynPAM71), wild-type (WT) cells exposed to Mn stress and strains expressing a tagged variant of SynPAM71 to characterize the role of SynPAM71...... in cyanobacterial Mn homeostasis. The ΔSynPAM71 strain displays an Mn-sensitive phenotype with reduced levels of chlorophyll and PSI accumulation, defects in PSII photochemistry and intracellular Mn enrichment, particularly in the thylakoid membranes. These effects are attributable to Mn toxicity, as very similar...

  12. Supporting Security against SYN Flooding Attack in Distributed DoS Via Measuring IPFIX-Based Traffic

    Science.gov (United States)

    Alipour, H.; Kia, M. Kashefi; Esmaeili, M.

    Distributed denial-of-service attacks on public servers after 2000 have become a serious problem. In the distributed denial-of-service (DDoS) attacks often seen recently, multiple distributed nodes concurrently attack a single server. To assure that network services will not be interrupted, faster and more effective defense mechanisms is needed to protect against malicious traffic, especially SYN floods. One problem in detecting SYN flood traffic is that server nodes or firewalls cannot distinguish the SYN packets of normal TCP connections from those of a SYN flood attack. Our method, FDFIX, relies on the use of monitoring and measurement techniques to evaluate the impact of DoS attacks. It uses flow based measurements. Capturing flow information is very important for detecting DoS and also other kinds of attacks. Flow monitoring allows detecting suspicious traffics and in the next step can analyze attacking flows and the results can be used for defense methods. Our method provides required information for many mechanisms that use traffic measurement as their input.

  13. Implantation technique of the 50-cm3 SynCardia Total Artificial Heart: does size make a difference?

    Science.gov (United States)

    Spiliopoulos, Sotirios; Guersoy, Dilek; Dimitriou, Alexandros Merkourios; Koerfer, Reiner; Tenderich, Gero

    2015-01-01

    Despite downsizing, implantation technique of the 50-cm(3) SynCardia Total Artificial Heart and settings of the Companion driver remain unchanged. Owing to the absence of de-airing nipples, de-airing procedure is even more crucial and has to be performed carefully.

  14. SynMuv genes redundantly inhibit lin-3/EGF expression to prevent inappropriate vulval induction in C. elegans.

    Science.gov (United States)

    Cui, Mingxue; Chen, Jun; Myers, Toshia R; Hwang, Byung Joon; Sternberg, Paul W; Greenwald, Iva; Han, Min

    2006-05-01

    Activation of EGFR-Ras-MAPK signaling in vulval precursor cells (VPCs) by LIN-3/EGF from the gonad induces vulval development in C. elegans. The prevailing view is that LIN-3 overcomes an "inhibitory signal" from the adjacent hyp7 hypodermal syncytium. This view originated from observations indicating that inactivation of functionally redundant Synthetic Multivulva (SynMuv) genes in hyp7 can activate EGFR-Ras-MAPK signaling in the VPCs. Many SynMuv genes encode transcription and chromatin-associated factors, including the Rb ortholog. Here, we show that the SynMuv A and SynMuv B gene classes are functionally redundant for transcriptional repression of the key target gene, lin-3/EGF, in the hypodermis. These observations necessitate a revision of the concept of "inhibitory signaling." They also underscore the importance of preventing inappropriate cell signaling during development and suggest that derepression of growth factors may be the mechanism by which tumor suppressor genes such as Rb can have cell nonautonomous effects.

  15. DFT Conformation and Energies of Amylose Fragments at Atomic Resolution Part I: Syn Forms of Alpha-Maltotetraose

    Science.gov (United States)

    DFT optimization studies of ninety syn '-maltotetraose (DP-4) amylose fragments have been carried out at the B3LYP/6-311++G** level of theory. The DP-4 fragments studied include V-helix, tightly bent conformations, a boat, and a 1C4 conformer. The standard hydroxymethyl rotamers (gg, gt, tg) were ...

  16. Discovery of syn-/anti-cocaine-N-oxide diastereomers in unwashed postmortem hair via LC-MS-MS.

    Science.gov (United States)

    Marsh, Christine M; Crawley, Lindsey R; Himes, Sarah K; Aranda, Roman; Miller, Mark L

    2014-01-01

    The discovery of two cocaine-N-oxide (CNO) diastereomers, syn- and anti-CNO, is reported for the first time. Prior to this study, only one structural form of CNO was known to exist and has not been analyzed in hair before. CNO is a metabolite of cocaine (COC) and may be considered as an additional biomarker of COC use, along with other known COC metabolites. The analysis of COC in hair for forensic applications is under scrutiny due to the possibility of external contamination. A qualitative liquid chromatography-tandem mass spectrometry method was developed, validated and applied to unwashed postmortem hair samples from drug users. The limit of detection in hair was 8 pg/mg (using 10 mg of unwashed hair) for each CNO diastereomer. The presence of both syn- and anti-forms of CNO was verified in vivo using hair samples collected from known COC-using individuals. Due to the low levels of CNO, it will not always be detectable in COC user hair. In the hair samples analyzed, syn-CNO was detected in more samples than anti-CNO. The stereoselective N-oxidation of COC which favors syn-CNO could have a diagnostic value for COC ingestion determination in hair analysis.

  17. High-grade iron ore at Windarling, Yilgarn Craton: a product of syn-orogenic deformation, hypogene hydrothermal alteration and supergene modification in an Archean BIF-basalt lithostratigraphy

    Science.gov (United States)

    Angerer, Thomas; Hagemann, Steffen G.; Danyushevsky, Leonid

    2013-08-01

    Banded iron formation (BIF)-hosted iron ore deposits in the Windarling Range are located in the lower greenstone succession of the Marda-Diemals greenstone belt, Southern Cross domain, Yilgarn Craton and constitute a total hematite-martite-goethite ore resource of minimum 52 Mt at 60 wt.% Fe (0.07 P). Banded iron formation is interlayered with high-Mg basalts at Windarling and precipitated during episodes of volcanic quiescence. Trace element content and the rare earth element (REE) ratios Y/Ho (42 to 45), Sm/Yb (1.5), together with positive La and Gd anomalies in `least-altered' hematite-magnetite-metachert-BIF indicate the precipitation from Archean seawater that was fertilised by hydrothermal vent fluids with a basaltic HREE-Y signature. Hypogene iron ore in sub-greenschist facies metamorphosed BIF formed during three distinct stages: ore stage 1 was a syn- to post-metamorphic, syn-D1, Fe-Ca-Mg-Ni-Co-P-REE metasomatism that produced local Ni-REE-rich Fe-dolomite-magnetite alteration in BIF. Hydrothermal alteration was induced by hot fluid flow controlled by brittle-ductile reactivation of BIF-basalt margins and crosscutting D1 faults. The Ni-Co-rich content of dolomite and a shift in REE ratios in carbonate-altered BIF towards Archean mafic rock signature (Y/Ho to 31 to 40, Sm/Yb to 1 to 2 and Gd/Gd* to 1.2 to 1.4) suggest that high-Mg basalts in the Windarling Range were the primary source of introduced metals. During ore stage 2, a syn-deformational and likely acidic and oxidised fluid flow along BIF-basalt margins and within D1 faults leached carbonate and precipitated lepidoblastic and anhedral/granoblastic hematite. High-grade magnetite-hematite ore is formed during this stage. Ore stage 3 hydrothermal specular hematite (spcH)-Fe-dolomite-quartz alteration was controlled by a late-orogenic, brittle, compressional/transpressional stage (D4; the regional-scale shear-zone-related D3 is not preserved in Windarling). This minor event remobilised iron oxides

  18. Ductile strain rate recorded in the Symvolon syn-extensional plutonic body (Rhodope core complex, Greece)

    Science.gov (United States)

    Cirrincione, Rosolino; Fazio, Eugenio; Ortolano, Gaetano; Fiannacca, Patrizia; Kern, Hartmut; Mengel, Kurt; Pezzino, Antonino; Punturo, Rosalda

    2016-04-01

    The present contribution deals with quantitative microstructural analysis, which was performed on granodiorites of the syn-tectonic Symvolon pluton (Punturo et al., 2014) at the south-western boundary of the Rhodope Core Complex (Greece). Our purpose is the quantification of ductile strain rate achieved across the pluton, by considering its cooling gradient from the centre to the periphery, using the combination of a paleopiezometer (Shimizu, 2008) and a quartz flow law (Hirth et al., 2001). Obtained results, associated with a detailed cooling history (Dinter et al., 1995), allowed us to reconstruct the joined cooling and strain gradient evolution of the pluton from its emplacement during early Miocene (ca. 700°C at 22 Ma) to its following cooling stage (ca. 500-300°C at 15 Ma). Shearing temperature values were constrained by means of a thermodynamic approach based on the recognition of syn-shear assemblages at incremental strain; to this aim, statistical handling of mineral chemistry X-Ray maps was carried out on microdomains detected at the tails of porphyroclasts. Results indicate that the strain/cooling gradients evolve "arm in arm" across the pluton, as also testified by the progressive development of mylonitic fabric over the magmatic microstructures approaching the host rock. References • Dinter, D. A., Macfarlane, A., Hames, W., Isachsen, C., Bowring, S., and Royden, L. (1995). U-Pb and 40Ar/39Ar geochronology of the Symvolon granodiorite: Implications for the thermal and structural evolution of the Rhodope metamorphic core complex, northeastern Greece. Tectonics, 14 (4), 886-908. • Shimizu, I. (2008). Theories and applicability of grain size piezometers: The role of dynamic recrystallization mechanisms. Journal of Structural Geology, 30 (7), 899-917. • Hirth, G., Teyssier, C., and Dunlap, J. W. (2001). An evaluation of quartzite flow laws based on comparisons between experimentally and naturally deformed rocks. International Journal of Earth

  19. Development of SYN-004, an oral beta-lactamase treatment to protect the gut microbiome from antibiotic-mediated damage and prevent Clostridium difficile infection.

    Science.gov (United States)

    Kaleko, Michael; Bristol, J Andrew; Hubert, Steven; Parsley, Todd; Widmer, Giovanni; Tzipori, Saul; Subramanian, Poorani; Hasan, Nur; Koski, Perrti; Kokai-Kun, John; Sliman, Joseph; Jones, Annie; Connelly, Sheila

    2016-10-01

    The gut microbiome, composed of the microflora that inhabit the gastrointestinal tract and their genomes, make up a complex ecosystem that can be disrupted by antibiotic use. The ensuing dysbiosis is conducive to the emergence of opportunistic pathogens such as Clostridium difficile. A novel approach to protect the microbiome from antibiotic-mediated dysbiosis is the use of beta-lactamase enzymes to degrade residual antibiotics in the gastrointestinal tract before the microflora are harmed. Here we present the preclinical development and early clinical studies of the beta-lactamase enzymes, P3A, currently referred to as SYN-004, and its precursor, P1A. Both P1A and SYN-004 were designed as orally-delivered, non-systemically available therapeutics for use with intravenous beta-lactam antibiotics. SYN-004 was engineered from P1A, a beta-lactamase isolated from Bacillus licheniformis, to broaden its antibiotic degradation profile. SYN-004 efficiently hydrolyses penicillins and cephalosporins, the most widely used IV beta-lactam antibiotics. In animal studies, SYN-004 degraded ceftriaxone in the GI tract of dogs and protected the microbiome of pigs from ceftriaxone-induced changes. Phase I clinical studies demonstrated SYN-004 safety and tolerability. Phase 2 studies are in progress to assess the utility of SYN-004 for the prevention of antibiotic-associated diarrhea and Clostridium difficile disease.

  20. Rh-Catalyzed Intermolecular Syn-Carboamination of Alkenes via a Transient Directing Group

    Science.gov (United States)

    Piou, Tiffany; Rovis, Tomislav

    2015-01-01

    Alkenes are the most ubiquitous pro-chiral functional groups accessible to synthetic chemists. For this reason, difunctionalization reactions of alkenes are particularly important, as they can be used to access highly complex molecular architectures.1,2 Stereoselective oxidation reactions, including dihydroxylation, aminohydroxylation and halogenation reactions,3,4,5,6 are well-established methods for functionalizing alkenes. However, the intermolecular incorporation of both carbon- and nitrogen-based functionalities stereoselectively across an alkene has not been reported. In this manuscript, we describe the Rh(III)-catalyzed syn carboamination of alkenes initiated by a C–H activation event that uses enoxyphthalimides as the source of the carbon and the nitrogen functionalities. The reaction methodology allows for the stereospecific formation of one C–C and one C–N bond across an alkene in a fully intermolecular sense, which is unprecedented. The reaction design involves the in situ generation of a bidentate directing group and the use of a novel cyclopentadienyl ligand to control the reactivity of Rh(III). The results provide a new route to functionalized alkenes and are expected to lead to the more convergent and stereoselective assembly of amine-containing acyclic molecules. PMID:26503048

  1. Physiological characterization of the SynCardia total artificial heart in a mock circulation system.

    Science.gov (United States)

    Crosby, Jessica R; DeCook, Katrina J; Tran, Phat L; Smith, Richard G; Larson, Douglas F; Khalpey, Zain I; Burkhoff, Daniel; Slepian, Marvin J

    2015-01-01

    The SynCardia total artificial heart (TAH) has emerged as an effective, life-saving biventricular replacement system for a wide variety of patients with end-stage heart failure. Although the clinical performance of the TAH is established, modern physiological characterization, in terms of elastance behavior and pressure-volume (PV) characterization has not been defined. Herein, we examine the TAH in terms of elastance using a nonejecting left ventricle, and then characterize the PV relation of the TAH by varying preload and afterload parameters using a Donovan Mock Circulatory System. We demonstrate that the TAH does not operate with time-varying elastance, differing from the human heart. Furthermore, we show that the TAH has a PV relation behavior that also differs from that of the human heart. The TAH does exhibit Starling-like behavior, with output increasing via preload-dependent mechanisms, without reliance on an alteration of inotropic state within the operating window of the TAH. Within our testing range, the TAH is insensitive to variations in afterload; however, this insensitivity has a limit, the limit being the maximum driving pressure of the pneumatic driver. Understanding the physiology of the TAH affords insight into the functional parameters that govern artificial heart behavior providing perspective on differences compared with the human heart.

  2. Syn-lethality: an integrative knowledge base of synthetic lethality towards discovery of selective anticancer therapies.

    Science.gov (United States)

    Li, Xue-juan; Mishra, Shital K; Wu, Min; Zhang, Fan; Zheng, Jie

    2014-01-01

    Synthetic lethality (SL) is a novel strategy for anticancer therapies, whereby mutations of two genes will kill a cell but mutation of a single gene will not. Therefore, a cancer-specific mutation combined with a drug-induced mutation, if they have SL interactions, will selectively kill cancer cells. While numerous SL interactions have been identified in yeast, only a few have been known in human. There is a pressing need to systematically discover and understand SL interactions specific to human cancer. In this paper, we present Syn-Lethality, the first integrative knowledge base of SL that is dedicated to human cancer. It integrates experimentally discovered and verified human SL gene pairs into a network, associated with annotations of gene function, pathway, and molecular mechanisms. It also includes yeast SL genes from high-throughput screenings which are mapped to orthologous human genes. Such an integrative knowledge base, organized as a relational database with user interface for searching and network visualization, will greatly expedite the discovery of novel anticancer drug targets based on synthetic lethality interactions. The database can be downloaded as a stand-alone Java application.

  3. SynFace—Speech-Driven Facial Animation for Virtual Speech-Reading Support

    Directory of Open Access Journals (Sweden)

    Salvi Giampiero

    2009-01-01

    Full Text Available This paper describes SynFace, a supportive technology that aims at enhancing audio-based spoken communication in adverse acoustic conditions by providing the missing visual information in the form of an animated talking head. Firstly, we describe the system architecture, consisting of a 3D animated face model controlled from the speech input by a specifically optimised phonetic recogniser. Secondly, we report on speech intelligibility experiments with focus on multilinguality and robustness to audio quality. The system, already available for Swedish, English, and Flemish, was optimised for German and for Swedish wide-band speech quality available in TV, radio, and Internet communication. Lastly, the paper covers experiments with nonverbal motions driven from the speech signal. It is shown that turn-taking gestures can be used to affect the flow of human-human dialogues. We have focused specifically on two categories of cues that may be extracted from the acoustic signal: prominence/emphasis and interactional cues (turn-taking/back-channelling.

  4. SynProt: A Comprehensive Database for Proteins of the Detergent-Resistant Synaptic Junctions Fraction

    Directory of Open Access Journals (Sweden)

    Rainer ePielot

    2012-06-01

    Full Text Available Chemical synapses are highly specialized cell-cell contacts for communication between neurons in the CNS characterized by complex and dynamic protein networks at both synaptic membranes. The cytomatrix at the active zone (CAZ organizes the apparatus for the regulated release of transmitters from the presynapse. At the postsynaptic side, the postsynaptic density constitutes the machinery for detection, integration and transduction of the transmitter signal. Both pre- and postsynaptic protein networks represent the molecular substrates for synaptic plasticity. Their function can be altered both by regulating their composition and by post-translational modification of their components. For a comprehensive understanding of synaptic networks the entire ensemble of synaptic proteins has to be considered. To support this, we established a comprehensive database for synaptic junction proteins (SynProt database primarily based on proteomics data obtained from biochemical preparations of detergent-resistant synaptic junctions. The database currently contains 2,788 non-redundant entries of rat, mouse and some human proteins, which mainly have been manually extracted from twelve proteomic studies and annotated for synaptic subcellular localization. Each dataset is completed with manually added information including protein classifiers as well as automatically retrieved and updated information from public databases (UniProt and PubMed. We intend that the database will be used to support modeling of synaptic protein networks and rational experimental design.

  5. SynProt: A Database for Proteins of Detergent-Resistant Synaptic Protein Preparations

    Science.gov (United States)

    Pielot, Rainer; Smalla, Karl-Heinz; Müller, Anke; Landgraf, Peter; Lehmann, Anne-Christin; Eisenschmidt, Elke; Haus, Utz-Uwe; Weismantel, Robert; Gundelfinger, Eckart D.; Dieterich, Daniela C.

    2012-01-01

    Chemical synapses are highly specialized cell–cell contacts for communication between neurons in the CNS characterized by complex and dynamic protein networks at both synaptic membranes. The cytomatrix at the active zone (CAZ) organizes the apparatus for the regulated release of transmitters from the presynapse. At the postsynaptic side, the postsynaptic density constitutes the machinery for detection, integration, and transduction of the transmitter signal. Both pre- and postsynaptic protein networks represent the molecular substrates for synaptic plasticity. Their function can be altered both by regulating their composition and by post-translational modification of their components. For a comprehensive understanding of synaptic networks the entire ensemble of synaptic proteins has to be considered. To support this, we established a comprehensive database for synaptic junction proteins (SynProt database) primarily based on proteomics data obtained from biochemical preparations of detergent-resistant synaptic junctions. The database currently contains 2,788 non-redundant entries of rat, mouse, and some human proteins, which mainly have been manually extracted from 12 proteomic studies and annotated for synaptic subcellular localization. Each dataset is completed with manually added information including protein classifiers as well as automatically retrieved and updated information from public databases (UniProt and PubMed). We intend that the database will be used to support modeling of synaptic protein networks and rational experimental design. PMID:22737123

  6. Prevalence of Calodium hepaticum (Syn. Capillaria hepatica) in house mice (Mus musculus) in the Azores archipelago.

    Science.gov (United States)

    Resendes, A R; Amaral, A F S; Rodrigues, A; Almeria, S

    2009-03-23

    Calodium hepaticum (Syn. Capillaria hepatica) is a zoonotic liver nematode of mammals distributed worldwide. Rodents are believed to be the main reservoirs of this nematode. In this paper, prevalence of the parasite was analyzed in liver histological sections from 51 house mice (Mus musculus) caught in human-inhabited houses, from two localities (Furnas and Rabo de Peixe) on São Miguel island from the Azores archipelago (Portugal). Mean prevalence of infection was 19.6%, with 33.3% prevalence in Furnas and 4.1% in Rabo de Peixe (P=0.07). No significant differences were found between the prevalence of infection and the age, body weight and the sex of mice. Hepatic lesions found were either acute and/or chronic stage and consisted of moderate to severe multifocal pyogranulomatous hepatitis with encapsulated eggs with typical bipolar plugs and moderate to severe necrotizing hepatitis consistent with larva tracks. Periportal inflammatory infiltration, hepatocyte regeneration and bile duct hyperplasia were also noted. In most cases, hepatic lesions occupied more than 50% of the liver, but despite severe lesions, in some mice, no signs of hepatic failure were noticed. The high rate of infection found in the present study suggests that house mice are an important reservoir for this parasite in the Azores and could have a role in human transmission.

  7. Genome Sequencing and Analysis of the Biomass-Degrading Fungus Trichoderma reesei (syn. Hypocrea jecorina)

    Energy Technology Data Exchange (ETDEWEB)

    Martinez, Antonio D.; Berka, Randy; Henrissat, Bernard; Saloheimo, Markku; Arvas, Mikko; Baker, Scott E.; Chapman, Jaro d; Chertkov, Olga; Coutinho, Pedro M.; Cullen, Dan; Danchin, Etienne G.; Grigoriev, Igor V.; Harris, Paul; Jackson, Melissa ?.; kubicek, Christian P.; Han, Cliff F.; Ho, Isaac; Larrando, Luis F.; Lopez de Leon, Alfredo; Magnuson, Jon K.; Merino, Sandy; Misra, Monica; Nelson, Beth; Putnam, Nicholas; Robbertse, Barbara; Salamov, Asaf; Schmoll, Monika; Terry, Astrid ?.; Thayer, Nina; Westerholm-Parvinen, Ann; Schoch, Conrad L.; Yao, Jian ?.; Barbote, Ravi; Nelson, Mary Anne; Detter, Chris J.; Bruce, David; Kuske, Cheryl; Xie, Gary; Richardson, P. M.; Rokhsar, Daniel S.; Lucas, Susan; Rubin, Eddie M.; Dunn-Coleman, Nigel; Ward, Michael ?.; Brettin, T.

    2008-05-01

    A major thrust of the white biotechnology movement involves the development of enzyme systems which depolymerize biomass to simple sugars which are subsequently converted to sustainable biofuels (e.g., ethanol) and chemical intermediates. The fungus Trichoderma reesei (syn. Hypocrea jecorina) represents a paradigm for the industrial production of highly efficient cellulases and hemicellulases needed for hydrolysis of biomass polysaccharides. Herein we describe intriguing attributes of the T. reeseigenome in relation to the future of fuel biotechnology. The T. reesei genome sequence was derived using a whole genome shotgun approach combined with finishing work to generate an assembly comprising 89 scaffolds totaling 34 Mbp with few gaps. In total, 9,130 gene models were predicted using a combination of ab initio and sequence similarity-based methods and EST data. Considering the industrial utility and effectiveness of its enzymes, the T. reesei genome surprisingly encodes the fewest cellulases and hemicellulases of any fungus having the ability to hydrolyze plant cell wall polysaccharides and whose genome has been sequenced. Many genes encoding carbohydrate active enzymes are distributed non-randomly in groups or clusters that interestingly lie between regions of synteny with other Sordariomycetes. Additionally, the T. reesei genome contains a multitude of genes encoding biosynthetic pathways for secondary metabolites (possible antibacterial and antifungal compounds) which may promote successful competition and survival in the crowded and competitive soil habitat occupied by T. reesei. Our analysis coupled with the availability of genome sequence data provides a roadmap for construction of enhanced T. reesei strains for industrial applications.

  8. Syn-vivo bioerosion of Nautilus by endo- and epilithic foraminiferans (New Caledonia and Vanuatu.

    Directory of Open Access Journals (Sweden)

    Barbara Seuss

    Full Text Available A variety of syn-vivo bioerosion traces produced by foraminiferans is recorded in shells of Nautilus sampled near New Caledonia and Vanuatu. These are two types of attachment scars of epilithic foraminiferans and two forms of previously undescribed microborings, a spiral-shaped and a dendritic one, both most likely being the work of endolithic 'naked' foraminiferans. Scanning electron microscopy of epoxy-resin casts of the latter revealed that these traces occur in clusters of up to many dozen individuals and potentially are substrate-specific. The foraminiferan traces are the sole signs of bioerosion in the studied Nautilus conchs, and neither traces of phototrophic nor other chemotrophic microendoliths were found. While the complete absence of photoautotrophic endoliths would be in good accordance with the life habit of Nautilus, which resides in aphotic deep marine environments and seeks shallower waters in the photic zone for feeding only during night-time, the absence of any microbial bioerosion may also be explained by an effective defence provided by the nautilid periostracum. Following this line of reasoning, the recorded foraminiferan bioerosion traces in turn would identify their trace makers as being specialized in their ability to penetrate the periostracum barrier and to bioerode the shell of modern Nautilus.

  9. Syn-vivo bioerosion of Nautilus by endo- and epilithic foraminiferans (New Caledonia and Vanuatu).

    Science.gov (United States)

    Seuss, Barbara; Wisshak, Max; Mapes, Royal H; Landman, Neil H

    2015-01-01

    A variety of syn-vivo bioerosion traces produced by foraminiferans is recorded in shells of Nautilus sampled near New Caledonia and Vanuatu. These are two types of attachment scars of epilithic foraminiferans and two forms of previously undescribed microborings, a spiral-shaped and a dendritic one, both most likely being the work of endolithic 'naked' foraminiferans. Scanning electron microscopy of epoxy-resin casts of the latter revealed that these traces occur in clusters of up to many dozen individuals and potentially are substrate-specific. The foraminiferan traces are the sole signs of bioerosion in the studied Nautilus conchs, and neither traces of phototrophic nor other chemotrophic microendoliths were found. While the complete absence of photoautotrophic endoliths would be in good accordance with the life habit of Nautilus, which resides in aphotic deep marine environments and seeks shallower waters in the photic zone for feeding only during night-time, the absence of any microbial bioerosion may also be explained by an effective defence provided by the nautilid periostracum. Following this line of reasoning, the recorded foraminiferan bioerosion traces in turn would identify their trace makers as being specialized in their ability to penetrate the periostracum barrier and to bioerode the shell of modern Nautilus.

  10. Syn-thrusting polygonal normal faults exposed in the hinge of the Cingoli anticline, northern Apennines, Italy

    Directory of Open Access Journals (Sweden)

    Lorenzo ePetracchini

    2015-11-01

    Full Text Available The Cingoli arcuate anticline is part of the Apennines fold-thrust belt in Italy. The anticline involves sedimentary carbonate strata generally affected by syn-thrusting contractional structures such as bed-normal pressure solution seams, folds, and reverse faults. An exception is constituted by an outcrop in the anticline hinge, where sub-horizontal carbonate and chert beds are affected by joints and intraformational short normal faults. These faults are poorly-systematic and conceivably polygonal in map view. They cut through the carbonate beds while usually stop against the chert layers that are bent and extended along the faults themselves. At the fault tips, the displacement is generally transferred, via a lateral step, to an adjacent similar fault segment. The fault surfaces are often characterized by slickolites, greenish clayey residue, and micro-breccias including chert and carbonate clasts. Fault displacement is partly or largely accommodated by pressure solution. The faults, in effect, are usually accompanied by bed-parallel pressure solution seams in the two contractional quadrants located at the present or past fault tips. The pressure solution features fade away departing from the faults. This evidence and others are analytically explained with fault tip stress distributions. The faults are interpreted as polygonal normal faults syn-tectonically (syn-thrusting nucleated in response to multi-directional stretching processes occurred at the Cingoli triple-folded anticline extrados. The faults then grew through a four-stage process: (1. stop the faults stopped at the competent chert beds; (2. shrink faulting produced shrinkage (pressure solution of carbonate beds at the fault compressive tips; (3. shrink and step the faults stepped laterally at the competent chert beds; (4. shatter the chert beds were shattered along the fault surfaces. The case presented constitutes the first reported one of syn-thrusting non-diagenetic polygonal

  11. 17 børns syn på skolen i skoleåret 2016-2017

    DEFF Research Database (Denmark)

    Broström, Stig

    Skoleforsker: Målrettede elever tager skolen meget seriøst Danske skoleelever har et nuanceret syn på livet, viser ministudie. Samtidig er reformen ikke slået helt igennem. Stig Broström har fulgt en gruppe elever fra forskellige skoler gennem syv år, hvor han har stillet dem spørgsmål om deres d...

  12. 基于时间序列分析的SYN Flooding源端检测方法%Detection method against SYN Flooding attacks based on source end by analysis of time series

    Institute of Scientific and Technical Information of China (English)

    王朝辉; 苏旸

    2012-01-01

    提出了一种基于时间序列分析从源端对SYN Flooding攻击进行检测的方法.该方法是为了从源端对网络流量进行检测并预测,从而判断是否发生了SYN Flooding攻击,为受害者端及时响应提供依据;利用攻击网络流量的自相似性,采用Bloom Filter提取数据流特征信息,构造网络流量时间序列,建立自回归预报模型;通过动态预测网络流量并与设定的阈值进行比较来对攻击预警,提前作出响应.仿真实验结果表明,该方法能准确地统计出网络中数据包和新源IP数据包的出现次数,具有较好的检测率和较低的误报率,能够较准确地预测出下一时间段甚至几个时间段的网络流量,能为有效防御SYN Flooding攻击提供有力的数据支撑.%This paper proposed a method of detecting DDoS attacks based on source end by analyzing the abrupt change of time series data. By detecting and predicting the data flow in the Internet at source end, the method could judge whether SYN Flooding was occurred or not for providing the foundation for the victim end. It extracted the characteristic information of data flow by using the self-similarity of network traffic flow and Bloom Filter algorithm, so that it could construct the time series of the network traffic flow and build the auto-regressive( AR) forecasting model. By dynamically forecasting traffic flow and coin-paring with definite threshold, pre-alert was sent and response was ahead adopted. The experimental results show that the scheme can count the number of the data packages and the number of the new IP data packages with the better detection rate and lower misinformation rate, besides, it can predict the traffic flow in the next period even several periods correctly, which can provide strong support for effectively defending against SYN Flooding attacks.

  13. O-2 Substituted pyranosyl oxacarbenium ions are C-2-O-2 2-fold rotors with a strong syn preference.

    Science.gov (United States)

    Ionescu, Andrei R; Whitfield, Dennis M; Zgierski, Marek Z

    2007-12-28

    The substituent at O-2 of glycopyranosides is known to have a pronounced effect on both the formation and the cleavage of glycosides at C-1. This is primarily attributed to stereoelectronic effects on the formation and stability of the related glycopyranosyl oxacarbenium ions. Previous QM studies of 2-O-methyl substituted manno and gluco configured pyranosyl oxacarbenium ions found a preference for the methyl carbon to be syn to the CH-2 methine. This study examines the conformational preference of variously substituted O-2 tetrahydropyranosyl oxacarbenium ions and confirms this syn preference. Neutral analogues are shown to have the expected 3-fold rotation whereas the charged species exhibit 2-fold rotation about C-2-O-2. Natural bond order (NBO) calculations suggest that the dominant stabilizing interaction is a unimodal O-2 lone pair to C-1-O-5 pi-bond hyperconjugative interaction. This syn conformational preference has important implications for mimics of glycopyranosyl oxacarbenium ion transition states. It also suggests a conformational based mechanism that can be exploited to tune the reactivity of glycopyranosyl donors in the glycosylation reaction.

  14. In vivo hemodynamic and electrocardiographic changes following Crataegus aronia syn. Azarolus L administration to normotensive Wistar rats.

    Science.gov (United States)

    Shatoor, Abdullah S

    2013-02-01

    To evaluate the effects of the whole plant aqueous extract of Crataegus aronia (C. aronia) syn. Azarolus (L) on the hemodynamic and electrocardiographic intervals in albino rats. This study was carried out in 2 stages at the Research Laboratory, Physiology Department, Medical College of King Khalid University, Abha, Kingdom of Saudi Arabia between February and June 2012. First, the effects of C. aronia syn. Azarolus (L) on the hemodynamics and electrocardiograph in 54 Wistar male rats were assessed, then the mechanisms underlying the hemodynamic and electrocardiographic changes observed in the first stage were evaluated in 48 rats of the same species. The C. aronia administered at escalating doses (0.05-20 microgram/kg) produced a dose-time-dependent decrease in heart rate (HR) and mean arterial pressure (MAP). Higher doses (15 and 20 microgram/kg) produced the most significant reduction in both HR and MAP, and induced sinus node suppression and progressive atrio-ventricular blockade. The underlying mechanism of the induced bradyarrhythmia appeared to be due to the direct stimulation of the muscarinic receptor M2 and possible blockade of beta-receptors, while the hypotension was caused by enhanced nitric oxide release. No significant alterations in the electrocardiogram (ECG) components were observed. The administration of the C. aronia syn. Azarolus extract induced bradyarrhythmia and hypotension, without alteration in the ECG components.

  15. Millimeter-wave spectroscopy of syn formyl azide (HC(O)N3) in seven vibrational states

    Science.gov (United States)

    Walters, Nicholas A.; Amberger, Brent K.; Esselman, Brian J.; Woods, R. Claude; McMahon, Robert J.

    2017-01-01

    Millimeter-wave spectra for formyl azide (HC(O)N3) were obtained from 240 to 360 GHz at ambient temperature. For the ground state of syn formyl azide, over 1500 independent rotational transitions were measured and least-squares fit to a complete S-reduced 8th order centrifugal distortion/rigid rotor Hamiltonian. The decomposition of formyl azide was monitored over a period of several hours, the half-life (t½ = 30 min) was determined, and its decomposition products were investigated. Transitions from five vibrational satellites of syn formyl azide (ν9, ν12, 2ν9, ν9 + ν12, and ν11) were observed, measured, and least-squares fit to complete or nearly complete octic centrifugally-distorted, single-state S-reduced models. A less complete single-state fit of 3ν9 (509.3 cm-1) was obtained from an unperturbed subset of its assignable transitions. This state is apparently coupled to the fundamental ν8 (489.4 cm-1) and the overtone 2ν12 (503.6 cm-1), but the coupling remains unanalyzed. Anharmonic CCSD(T)/ANO1 estimates of the vibrational frequencies of syn formyl azide were in close agreement with previously published experimental and computational values. Experimentally determined vibration-rotation interaction (αi) values were in excellent agreement with coupled-cluster predicted αi values for the fundamentals ν9, ν12, and ν11.

  16. - and Syn-Eruptive Surface Movements of Azerbaijan Mud Volcanoes Detected Through Insar Analysis: Preliminary Results

    Science.gov (United States)

    Antonielli, Benedetta; Monserrat, Oriol; Bonini, Marco; Righini, Gaia; Sani, Federico; Luzi, Guido; Feyzullayev, Akper; Aliyev, Chingiz

    2014-05-01

    edifices. In particular, for the Ayaz-Akhtarma, the interferograms show the pre- and the syn-eruptive phases, reaching a maximum displacements about 5.3 cm in 70 days. In the case of the Khara Zira mud volcano eruption, the time span covered by the interferograms with good coherence values ends some months before the eruption, thus only the initial stages of the pre-eruption deformation can be observed, with a maximum uplift about 2.3 cm in 70 days. Paroxysmal phases that occasionally may interrupt the quiescent activity of mud volcanoes consist of violent release of large mud flows and flaming eruption caused by the self-ignition of the methane. The bulging observed in the interferograms connected with the pre- and syn-eruptive phases is probably due to an increase of overpressure which precedes a paroxysmal activity phase.

  17. SynTView — an interactive multi-view genome browser for next-generation comparative microorganism genomics

    Science.gov (United States)

    2013-01-01

    Background Dynamic visualisation interfaces are required to explore the multiple microbial genome data now available, especially those obtained by high-throughput sequencing — a.k.a. “Next-Generation Sequencing” (NGS) — technologies; they would also be useful for “standard” annotated genomes whose chromosome organizations may be compared. Although various software systems are available, few offer an optimal combination of feature-rich capabilities, non-static user interfaces and multi-genome data handling. Results We developed SynTView, a comparative and interactive viewer for microbial genomes, designed to run as either a web-based tool (Flash technology) or a desktop application (AIR environment). The basis of the program is a generic genome browser with sub-maps holding information about genomic objects (annotations). The software is characterised by the presentation of syntenic organisations of microbial genomes and the visualisation of polymorphism data (typically Single Nucleotide Polymorphisms — SNPs) along these genomes; these features are accessible to the user in an integrated way. A variety of specialised views are available and are all dynamically inter-connected (including linear and circular multi-genome representations, dot plots, phylogenetic profiles, SNP density maps, and more). SynTView is not linked to any particular database, allowing the user to plug his own data into the system seamlessly, and use external web services for added functionalities. SynTView has now been used in several genome sequencing projects to help biologists make sense out of huge data sets. Conclusions The most important assets of SynTView are: (i) the interactivity due to the Flash technology; (ii) the capabilities for dynamic interaction between many specialised views; and (iii) the flexibility allowing various user data sets to be integrated. It can thus be used to investigate massive amounts of information efficiently at the chromosome level. This

  18. Comment on “Stratigraphy, petrography and dispersion of the lower Permian syn-eruptive deposits in the Viar Basin, Spain” by S. Sierra, C. Moreno and E. Pascual [Sedimentary Geology 217 (2009) 1-29

    Science.gov (United States)

    Wagner, R. H.; Mayoral, E.

    2010-07-01

    Comments are provided on a published paper on "Lower Permian" strata in SW Spain [S. Sierra, C. Moreno and E. Pascual, Stratigraphy, petrography and dispersion of the lower Permian syn-eruptive deposits in the Viar Basin, Spain, Sedimentary Geology 217 (2009) 1-29], which failed to take into account up-to-date information on this most southerly occurrence in western Europe. This generally lacustrine basin commenced with valley fill deposits in a deeply incised palaeotopography and contains mainly red beds with two basaltic intervals and a major acidic volcanic episode linked to a nearby volcanic centre to the Northeast. The stratigraphic succession shows southeasterly onlap. Although a syn-sedimentary fault has been postulated on the NE basin margin, the field evidence disproves this notion as well as the assumption that this "Early Permian" basin would have been controlled by a rejuvenated Ossa-Morena/South Portuguese boundary fault. In fact, this basin lies within the (former) area of Ossa-Morena.

  19. A 28 nt long synthetic 5′UTR (synJ as an enhancer of transgene expression in dicotyledonous plants

    Directory of Open Access Journals (Sweden)

    Kanoria Shaveta

    2012-11-01

    Full Text Available Abstract Background A high level of transgene expression is required, in several applications of transgenic technology. While use of strong promoters has been the main focus in such instances, 5′UTRs have also been shown to enhance transgene expression. Here, we present a 28 nt long synthetic 5′UTR (synJ, which enhances gene expression in tobacco and cotton. Results The influence of synJ on transgene expression was studied in callus cultures of cotton and different tissues of transgenic tobacco plants. The study was based on comparing the expression of reporter gene gus and gfp, with and without synJ as its 5′UTR. Mutations in synJ were also analyzed to identify the region important for enhancement. synJ, enhances gene expression by 10 to 50 fold in tobacco and cotton depending upon the tissue studied. This finding is based on the experiments comparing the expression of gus gene, encoding the synJ as 5′UTR under the control of 35S promoter with expression cassettes based on vectors like pBI121 or pRT100. Further, the enhancement was in most cases equivalent to that observed with the viral leader sequences known to enhance translation like Ω and AMV. In case of transformed cotton callus as well as in the roots of tobacco transgenic plants, the up-regulation mediated by synJ was much higher than that observed in the presence of both Ω as well as AMV. The enhancement mediated by synJ was found to be at the post-transcriptional level. The study also demonstrates the importance of a 5′UTR in realizing the full potential of the promoter strength. synJ has been utilized to design four cloning vectors: pGEN01, pBGEN02, pBGEN02-hpt and pBGEN02-ALSdm each of which can be used for cloning the desired transgene and achieving high level of expression in the resulting transgenic plants. Conclusions synJ, a synthetic 5′UTR, can enhance transgene expression under a strong promoter like 35S as well as under a weak promoter like nos in

  20. ATP Sulfurylase is Essential for the Utilization of Sulfamate as a Sulfur Source in the Yeast Komagataella pastoris (syn. Pichia pastoris).

    Science.gov (United States)

    Linder, Tomas

    2017-09-01

    The methylotrophic yeast Komagataella pastoris (syn. Pichia pastoris) is one of the few known yeasts that can utilize sulfamate ([Formula: see text]) as a sulfur source. The biochemical pathway responsible for the catabolism of sulfamate has yet to be identified. The present study sought to investigate whether sulfamate catabolism proceeds through either of the inorganic sulfur intermediates sulfate ([Formula: see text]) or sulfite ([Formula: see text]) before its assimilation and subsequent incorporation into sulfur-containing amino acids and their derivatives. Two key genes in the K. pastoris inorganic sulfur assimilation pathway were deleted separately and the ability of each deletion mutant to utilize sulfamate and other selected sulfur sources was studied. Deletion of the MET3 gene (which encodes the enzyme ATP sulfurylase) did not affect growth on L-methionine, sulfite, methanesulfonate, or taurine but completely abolished growth on sulfate, methyl sulfate and sulfamate. Deletion of the MET5 gene (which encodes the β subunit of the enzyme sulfite reductase) abolished growth on all tested sulfur sources except L-methionine. These results suggest that the catabolism of sulfamate proceeds through a sulfate intermediate before its assimilation.

  1. Syn and post- emplacement transformations of the Misti (Peru) volcanic debris avalanches into lahars

    Science.gov (United States)

    Bernard, K.; Van Wyk de Vries, B.; Thouret, J.

    2012-12-01

    We identify stratigraphic, sedimentological and structural variations in lithofacies of debris-avalanche deposits from El Misti volcano in the Quebrada San Lazaro and Río Chili Valley, near the city of Arequipa (south Peru), to determine lithofacies transformations. We describe the internal process associated to the external conditions acting on debris-avalanche deposits in order to assess stages of transformations from the proximal to distal debris-avalanche deposits and the associated epiclastic deposits. Syn-emplacement transformations inside the volcanic debris-avalanche deposits in the upper course of the Rio Chili Valley: within a few meters, the proximal block facies of the sheared debris-avalanche deposit is transformed at the contact of the ash-rich alluvial deposits in thick units comprising a strongly sheared base of the deposit, then stratified matrix dominated beds with normally sorted boulders aligned with the beds. This is interpreted as the effect of strong shearing inside the confined and proximal debris avalanche during motion, which generated a localised stretching near the base of the deposit and the bulking of the thin water saturated basal layers: the bearing capacity of the matrix debris- avalanche is modified, the block facies has been transformed in a stratified matrix facies. The transformations by bulking along a strong sheared contact contribute to reduce the run-out distance of the debris avalanches in the Río Chili valley. Post-deposition evolutions of the debris-avalanche deposits in the Quebrada San Lazaro: in the upper course of the valley, the landslides in the debris- avalanche deposits related to water circulation destabilise the covering scree and volcanic colluvium dipping at 70°. The fragmentation and sorting due to gravity and water are the external processes which separate matrix and block elements; This is the first stage of transformation. The remobilisation of these separated fractions into lahars transforms this

  2. QTL Mapping of Low-Temperature Germination Ability in the Maize IBM Syn4 RIL Population.

    Directory of Open Access Journals (Sweden)

    Shuaidong Hu

    Full Text Available Low temperature is the primary factor to affect maize sowing in early spring. It is, therefore, vital for maize breeding programs to improve tolerance to low temperatures at seed germination stage. However, little is known about maize QTL involved in low-temperature germination ability. 243 lines of the intermated B73×Mo17 (IBM Syn4 recombinant inbred line (RIL population was used for QTL analysis of low-temperature germination ability. There were significant differences in germination-related traits under both conditions of low temperature (12°C/16 h, 18°C/8 h and optimum temperature (28°C/24 h between the parental lines. Only three QTL were identified for controlling optimum-temperature germination rate. Six QTL controlling low-temperature germination rate were detected on chromosome 4, 5, 6, 7 and 9, and contribution rate of single QTL explained between 3.39%~11.29%. In addition, six QTL controlling low-temperature primary root length were detected in chromosome 4, 5, 6, and 9, and the contribution rate of single QTL explained between 3.96%~8.41%. Four pairs of QTL were located at the same chromosome position and together controlled germination rate and primary root length under low temperature condition. The nearest markers apart from the corresponding QTL (only 0.01 cM were umc1303 (265.1 cM on chromosome 4, umc1 (246.4 cM on chromosome 5, umc62 (459.1 cM on chromosome 6, bnl14.28a (477.4 cM on chromosome 9, respectively. A total of 3155 candidate genes were extracted from nine separate intervals based on the Maize Genetics and Genomics Database (http://www.maizegdb.org. Five candidate genes were selected for analysis as candidates putatively affecting seed germination and seedling growth at low temperature. The results provided a basis for further fine mapping, molecular marker assisted breeding and functional study of cold-tolerance at the stage of seed germination in maize.

  3. QTL Mapping of Low-Temperature Germination Ability in the Maize IBM Syn4 RIL Population.

    Science.gov (United States)

    Hu, Shuaidong; Lübberstedt, Thomas; Zhao, Guangwu; Lee, Michael

    2016-01-01

    Low temperature is the primary factor to affect maize sowing in early spring. It is, therefore, vital for maize breeding programs to improve tolerance to low temperatures at seed germination stage. However, little is known about maize QTL involved in low-temperature germination ability. 243 lines of the intermated B73×Mo17 (IBM) Syn4 recombinant inbred line (RIL) population was used for QTL analysis of low-temperature germination ability. There were significant differences in germination-related traits under both conditions of low temperature (12°C/16 h, 18°C/8 h) and optimum temperature (28°C/24 h) between the parental lines. Only three QTL were identified for controlling optimum-temperature germination rate. Six QTL controlling low-temperature germination rate were detected on chromosome 4, 5, 6, 7 and 9, and contribution rate of single QTL explained between 3.39%~11.29%. In addition, six QTL controlling low-temperature primary root length were detected in chromosome 4, 5, 6, and 9, and the contribution rate of single QTL explained between 3.96%~8.41%. Four pairs of QTL were located at the same chromosome position and together controlled germination rate and primary root length under low temperature condition. The nearest markers apart from the corresponding QTL (only 0.01 cM) were umc1303 (265.1 cM) on chromosome 4, umc1 (246.4 cM) on chromosome 5, umc62 (459.1 cM) on chromosome 6, bnl14.28a (477.4 cM) on chromosome 9, respectively. A total of 3155 candidate genes were extracted from nine separate intervals based on the Maize Genetics and Genomics Database (http://www.maizegdb.org). Five candidate genes were selected for analysis as candidates putatively affecting seed germination and seedling growth at low temperature. The results provided a basis for further fine mapping, molecular marker assisted breeding and functional study of cold-tolerance at the stage of seed germination in maize.

  4. Late Triassic syn-exhumation magmatism in central Qiangtang, Tibet: Evidence from the Sangehu adakitic rocks

    Science.gov (United States)

    Liu, Han; Wang, Bao-di; Ma, Long; Gao, Rui; Chen, Li; Li, Xiao-bo; Wang, Li-quan

    2016-12-01

    The geodynamic setting of Late Triassic magmatic activity along the Longmu Co-Shuanghu suture zone (LSSZ) in central Qiangtang, Tibet is a matter of debate. This paper presents zircon LA-ICP-MS U-Pb ages, zircon Hf isotopic compositions, and whole-rock geochemical data for the Sangehu (SGH) granitic intrusion in central Qiangtang, and addresses the petrogenesis of Late Triassic magmatism, and the history of collision between the northern and southern Qiangtang terranes. The SGH pluton consists mainly of biotite adamellite with mafic microgranular enclaves (MMEs), and small amounts of K-feldspar granite. The biotite adamellite, MMEs, and K-feldspar granite give ages of 207.8 ± 3.0 Ma, 212.4 ± 31 Ma, and 211.6 ± 3.8 Ma, respectively. The MMEs show magmatic textures and acicular apatite, and are coeval with the host biotite adamellite, suggesting they were produced by magma mixing. All samples from the SGH pluton show high Sr and low Y contents, and positive Eu anomalies, similar to adakitic rocks. The high K2O contents and low Mg#, Cr, and Ni contents, and enriched Hf isotopic characteristics of the zircons indicate that these magmas were derived from the partial melting of thickened crust. However, the whole-rock geochemical data and zircon Hf isotopic compositions also reveal heterogeneity at the source. The combined magmatic and metamorphic records suggest that Triassic magmatic activity in central Qiangtang was closely related to the collision of the northern and southern Qiangtang terranes. The large-scale Late Triassic (225-200 Ma) magmatic event in central Qiangtang may have resulted from the breakoff of the Longmu Co-Shuanghu Tethys Ocean lithospheric slab in the early Late Triassic (236-230 Ma). The Late Triassic magmatic rocks, including adakitic rocks, are coeval with retrograde high-pressure (HP) to ultrahigh-pressure (UHP) metamorphic rocks in central Qiangtang, and show characteristics of syn-exhumation magmatism. The early adakitic rocks (>220 Ma

  5. Fluorescent C-linked C8-aryl-guanine probe for distinguishing syn from anti structures in duplex DNA.

    Science.gov (United States)

    Manderville, Richard A; Omumi, Alireza; Rankin née Schlitt, Katherine M; Wilson, Katie A; Millen, Andrea L; Wetmore, Stacey D

    2012-06-18

    The synthesis and optical properties of the carbon (C)-linked C(8)-(2"-benzo[b]thienyl)-2'-deoxyguanosine ((Bth)dG), which acts as a fluorescent reporter of syn versus anti glycosidic conformations in duplex DNA, are described. In the syn-conformation, the probe stabilizes a G:G mismatch, emits at ∼385 nm (excitation ∼285 nm), and shows an induced circular dichroism (ICD) signal at ∼320 nm. Molecular dynamics (MD) simulations predict a wedge (W)-conformation for the mismatched duplex with the C(8)-benzo[b]thienyl moiety residing in the minor groove. In contrast, the probe destabilizes the duplex when base paired with its normal pyrimidine partner C. With flanking purine bases, a major groove B-type duplex is favored with (Bth)dG present in the anti-conformation emitting at ∼413 nm (excitation ∼326 nm) and no ICD signal. However, with flanking pyrimidine bases, (Bth)dG adopts the syn-conformation when base paired with C, and MD simulations predict a base-displaced stacked (S)-conformation, with the opposing C flipped out of the helix. The different duplex (B-, S-, and W-) conformers formed upon incorporation of (Bth)dG are known to play a critical role in the biological activity of N-linked C8-dG adducts formed by arylamine carcinogens. Bulky environment-sensitive fluorescent C(8)-dG adducts that mimic the duplex structures formed by carcinogens may be useful in luminescence-based DNA polymerase assays.

  6. Facies, stratal and stacking patterns of syn-rift sequences along present-day and fossil hyperextended rifted margins

    Science.gov (United States)

    Ribes, Charlotte; Epin, Marie-Eva; Gillard, Morgane; Chenin, Pauline; Ghienne, Jean-Francois; Manatschal, Gianreto; Karner, Garry D.; Johnson, Christopher A.

    2017-04-01

    Research on the formation and evolution of deep-water rifted margins has undergone a major paradigm shift in recent years. An increasing number of studies of present-day and fossil rifted margins allows us to identify and characterize the architecture of hyperextended rifted margins. However, at present, little is known about the depositional environments, sedimentary facies and stacking and stratal patterns in syn-rift sequences within these domains. In this context, characterizing and understanding the spatial and temporal evolution of the stratal and stacking patterns is a new challenge. The syn-rift sequence at rifted margins is deposited during the initial stages of stretching to the onset of oceanic accretion and comprises pre-, syn- and post-kinematic deposits along the margin. A difficulty arises from the fact that the observed stratigraphic geometries and facies relationships result from the complex interplay between sediment supply and creation of accommodation, which in turn are controlled by regional synchronous events (i.e. crustal necking and onset of seafloor spreading) and diachronous events (i.e. migration of deformation during rifting, lags in sediment input to the distal margin). These parameters are poorly constrained in hyperextended rift systems. Indeed, the complex structural evolution of hyperextended systems include an evolution from initially distributed to localized extension (i.e. necking) and the development of poly-phase in-sequence and/or out of sequence extensional faulting associated with mantle exhumation and magmatic activity. This multiphase structural evolution can generate complex accommodation patterns over a highly structured top basement but can only be recognized if there is sufficient sediment input to record the events. In our presentation, we show preliminary results for fossil Alpine Tethys margins exposed in the Alps and seismic examples of the present-day deep water rifted margins offshore Australian-Antarctica, East

  7. First records of syn-diagenetic non-tectonic folding in quaternary thermogene travertines caused by hydrothermal incremental veining

    Science.gov (United States)

    Billi, Andrea; Berardi, Gabriele; Gratier, Jean-Pierre; Rossetti, Federico; Vignaroli, Gianluca; Baykara, M. Oruç; Bernasconi, Stefano M.; Kele, Sándor; Soligo, Michele; De Filippis, Luigi; Shen, Chuan-Chou

    2017-03-01

    This study is the first documentation of syn-diagenetic non-tectonic contractional deformations observed in two Pleistocene thermogene travertine deposits from the late Miocene-Pleistocene Tuscan extensional-hydrothermal province (Italy). The deposits consist of primary porous beds hosting secondary bed-parallel carbonate veins. The porous beds are generally flat-lying, particularly in the upper section of the deposits, whereas the veined beds frequently form undulated structures. These structures are up to a few meters in wavelength, are mostly confined within the lower-middle section of the deposits, and are here mostly interpreted as folds. Field observations, U-Th geochronology, and stable isotope analyses are used to characterize the origin of veins and folds. Radiometrically-determined age inversions, structure overprinting relationships, downward growth of vein crystals, deformation of primary sedimentary structures, and downward increasing frequency of veins and folds show that the undulated travertine beds can be mainly interpreted as the product of syn-diagenetic hydrothermal rejuvenation causing non-tectonic veining and folding. The non-tectonic hypothesis is also supported by the absence of contractional deformation in the travertine-hosting sediments. The folds were generated by complex mechanisms including bending and buckling caused by laterally-confined volume expansion during syn-diagenetic circulation of mineralizing fluids and related incremental veining. Modeling some folds with the Biot-Ramberg's buckling equation shows a vein-to-host travertine viscosity ratio between 1.5 and 4, confirming the syn-diagenetic origin of folds. Veining and folding changed some original properties of travertines including rheology, fabric, porosity, and chronological sequence. The identification of these structures and related changes of rock properties (e.g., age rejuvenation) is relevant for the proper interpretation of thermogene travertines as recorders of

  8. PREVALENCE OF Calodium hepaticum (SYN. Capillaria hepatica IN Rattus norvegicus IN THE URBAN AREA OF RIO DE JANEIRO, BRAZIL

    Directory of Open Access Journals (Sweden)

    Raquel O. Simões

    2014-09-01

    Full Text Available The nematode Calodium hepaticum (syn. Capillaria hepatica is a zoonotic helminth found mainly infecting rats. It was studied the prevalence of C. hepaticum infection in Rattus norvegicus in an urban area of Rio de Janeiro (Brazil, with low urban planning and sanitation. The presence of C. hepaticum was identified through visible yellowish-white lesions in liver tissue and histological analyses. The total prevalence of infection was 45%, with no significant differences between sex and age. The presence of infected rodents near the peridomestic area poses substantial risk to human health.

  9. JOINTS AND SYN-SEDIMENTARY FAULTS NETWORKS IN MARINE CLAYS AND MUDSTONES. Importance for Radwaste storage

    Science.gov (United States)

    Arnould, M.

    2009-12-01

    There is a number of marine clays, mudstones, marls, 100 to 200 m thick, showing smectites, mixed layers illite/smectite, with a small percentage of organic matter and sulphides with a variable clay, silt, and carbonate content. I published (Arnould , 2006) examples from Lower Cambrian to Miocene in age and from the Baltic shore to Spain in Europe. Observations were made mostly in quarries and pits down to more than 40 m and in underground research laboratories (URL). Only visible on fresh cuts amongst a variety of fissures there is always a network of joints. Schematically one family is the bedding (horizontal) the two others are normal to the bedding and orthogonal between them. The orientations of vertical joints are different from the orientations of pits and quarries’s walls. The networks are intrinsic. It was first well described by Skempton & al (1969) in Eocene London Clay. Joints are matt in texture, clean, without filling or cement. The order of magnitude of their linear dimensions is decimeter to meter. It is necessary to start from the original sediment: mud. Deposited in flakes mud has a bee’s nest microscopic structure. Each nest is full of water. Hence mud may have a water content up to 300%, reported to its dry weight. Paradoxically mud is impervious. As proposed by Cosgrove (2001) progressive but discontinuous hydraulic fracturing could be the origin of vertical joints, with drainage upwards and compaction of the sediment. Geological observations show that ioints are formed during the sedimentation process. There is also a world literature concluding at the necessary early fracturing of mudstones and marls hosts of sand dykes. Very few faults are identified in field observations and on exploration logs. But it is obvious that drainage and compaction of mud over thousands square kilometers induced differential settlements with many syn-sedimentary non tectonic faults constituting another discontinuity network. These faults inside the same

  10. Does the G.G*syn DNA mismatch containing canonical and rare tautomers of the guanine tautomerise through the DPT? A QM/QTAIM microstructural study

    Science.gov (United States)

    Brovarets', Ol'ha O.; Hovorun, Dmytro M.

    2014-12-01

    We have established that the asynchronous concerted double proton transfer (DPT), moving with a time gap and without stable intermediates, is the underlying mechanism for the tautomerisation of the G.G*syn DNA base mispair (C1 symmetry), formed by the keto and enol tautomers of the guanine in the anti- and syn-configurations, into the G*.G*syn base mispair (C1), formed by the enol and imino tautomers of the G base, using quantum-mechanical calculations and Bader's quantum theory of atoms in molecules. By constructing the sweeps of the geometric, electron-topological, energetic, polar and natural bond orbital properties along the intrinsic reaction coordinate of the G.G*syn↔G*.G*syn DPT tautomerisation, the nine key points, that are critical for the atomistic understanding of the tautomerisation reaction, were set and comprehensively analysed. It was found that the G.G*syn mismatch possesses pairing scheme with the formation of the O6...HO6 (7.01) and N1H...N7 (6.77) H-bonds, whereas the G*.G*syn mismatch - of the O6H...O6 (10.68) and N1...HN7 (9.59 kcal mol-1) H-bonds. Our results highlight that these H-bonds are significantly cooperative and mutually reinforce each other in both mismatches. The deformation energy necessary to apply for the G.G*syn base mispair to acquire the Watson-Crick sizes has been calculated. We have shown that the thermodynamically stable G*.G*syn base mispair is dynamically unstable structure with a lifetime of 4.1 × 10-15 s and any of its six low-lying intermolecular vibrations can develop during this period of time. These data exclude the possibility to change the tautomeric status of the bases under the dissociation of the G.G*syn mispair into the monomers during DNA replication. Finally, it has been made an attempt to draw from the physico-chemical properties of all four incorrect purine-purine DNA base pairs a general conclusion, which claims the role of the transversions in spontaneous point mutagenesis.

  11. At low concentrations, 3,4-dihydroxyphenylacetic acid (DOPAC) binds non-covalently to alpha-synuclein and prevents its fibrillation.

    Science.gov (United States)

    Zhou, Wenbo; Gallagher, Amy; Hong, Dong-Pyo; Long, Chunmei; Fink, Anthony L; Uversky, Vladimir N

    2009-05-01

    Several studies have shown that catecholamines can inhibit the fibrillation of alpha-synuclein (alpha-Syn), a small presynaptic protein whose aggregation is believed to be a critical step in the etiology of Parkinson's disease and several other neurodegenerative disorders. However, the mechanism of this inhibition is uncertain. We show here that substoichiometric concentrations of 3,4-dihydroxyphenylacetic acid (DOPAC), a normal product of the metabolism of dopamine, can inhibit the fibrillation of alpha-Syn, due to non-covalent binding of DOPAC to alpha-Syn monomer. Intriguingly, the presence of alpha-Syn accelerates the spontaneous oxidation of DOPAC, and the oxidized form of DOPAC (the quinone) is responsible for the fibrillation inhibition. In addition, the presence of DOPAC leads to the oxidation of the methionine residues of alpha-Syn, probably due to the H(2)O(2) production as a by-product of DOPAC oxidation. The lack of fibrillation results from the formation of stable oligomers, which are very similar to those observed transiently at early stages of the alpha-Syn fibrillation. A possible explanation for this phenomenon is that DOPAC stabilizes the normally transient oligomers and prevents them from subsequent fibril formation. The analysis of the alpha-Syn Y39W variant suggests that DOPAC binds non-covalently to the same N-terminal region of alpha-Syn as lipid vesicles, probably in the vicinity of residue 39. In contrast to the compounds with 1,2-dihydroxyphenyl groups (DOPAC and catechol), their 1,4-dihydroxyphenyl isomers (hydroquinone and homogentisic acid) are able to modify alpha-Syn covalently, probably due to the less steric hindrance in the Michael addition.

  12. U Pb zircon and monazite geochronology of Variscan magmatism related to syn-convergence extension in Central Northern Portugal

    Science.gov (United States)

    Valle Aguado, B.; Azevedo, M. R.; Schaltegger, U.; Martínez Catalán, J. R.; Nolan, J.

    2005-05-01

    The Viseu area is located in the Central Iberian Zone of the Iberian Variscan Belt and hosts numerous post-thickening, collision-related granitoids intruded into upper and middle crustal levels. The present paper reports high precision U-Pb zircon and monazite ages for four plutons of the Viseu area: the syn-kinematic granitoids of Maceira (314±5 Ma), Casal Vasco (311±1 Ma) and Junqueira (307.8±0.7 Ma) and the late-kinematic biotite monzogranites of Cota (306±9 Ma). This points to a synchronous emplacement of the different syn-kinematic plutons shortly followed by the intrusion of the late-kinematic granites and shows that the Upper Carboniferous plutonism occurred within a short time span of ca. 10 million years. The ascent of granite magmas took place after an extensional tectonic event (D 2) and is coeval with dextral and sinistral crustal-scale transcurrent shearing (D 3). Field and petrographical evidence suggest a narrow time-span between peak T metamorphic conditions and the intrusion of granitic melts which implies very fast uplift rates accommodated through active tectonic exhumation. Magma compositions evolve through time, reflecting an increasing involvement of mid-crustal sources and the underplating effect of an upwelling asthenospheric mantle at the base of a thinning and stretching continental crust.

  13. SynSysNet: integration of experimental data on synaptic protein–protein interactions with drug-target relations

    Science.gov (United States)

    von Eichborn, Joachim; Dunkel, Mathias; Gohlke, Björn O.; Preissner, Sarah C.; Hoffmann, Michael F.; Bauer, Jakob M. J.; Armstrong, J. D.; Schaefer, Martin H.; Andrade-Navarro, Miguel A.; Le Novere, Nicolas; Croning, Michael D. R.; Grant, Seth G. N.; van Nierop, Pim; Smit, August B.; Preissner, Robert

    2013-01-01

    We created SynSysNet, available online at http://bioinformatics.charite.de/synsysnet, to provide a platform that creates a comprehensive 4D network of synaptic interactions. Neuronal synapses are fundamental structures linking nerve cells in the brain and they are responsible for neuronal communication and information processing. These processes are dynamically regulated by a network of proteins. New developments in interaction proteomics and yeast two-hybrid methods allow unbiased detection of interactors. The consolidation of data from different resources and methods is important to understand the relation to human behaviour and disease and to identify new therapeutic approaches. To this end, we established SynSysNet from a set of ∼1000 synapse specific proteins, their structures and small-molecule interactions. For two-thirds of these, 3D structures are provided (from Protein Data Bank and homology modelling). Drug-target interactions for 750 approved drugs and 50 000 compounds, as well as 5000 experimentally validated protein–protein interactions, are included. The resulting interaction network and user-selected parts can be viewed interactively and exported in XGMML. Approximately 200 involved pathways can be explored regarding drug-target interactions. Homology-modelled structures are downloadable in Protein Data Bank format, and drugs are available as MOL-files. Protein–protein interactions and drug-target interactions can be viewed as networks; corresponding PubMed IDs or sources are given. PMID:23143269

  14. Structural development of the Australian Otway passive margin; the kinematics and interaction of syn-sedimentary faults

    Science.gov (United States)

    Tanner, D. C.; Ziesch, J.; Krawczyk, C. M.

    2016-12-01

    The onshore Otway passive margin basin is characterized by a large number of normal faults. All the faults were active during sedimentation, but to varying degrees, between ca. 120 and 50 Ma, before they died out. Using a detailed interpretation of a 3-D reflection seismic cube (32.3 km x 14.35 km x 4100 ms TWT), we interpreted the kinematics of the faults within the 2.2 km thick syn-rift Late Cretaceous to Recent sediments. From analysis of fault juxtaposition and fault tip-line propagation maps, as well as analysis of thickness maps we determine the amount of syn-sedimentary movement and the kinematics of each fault. We observe two very different behaviours of the faults' tip line propagation as well as internal isolines of fault slip: while all fault strike lengths decrease stratigraphically upwards as the faults retreated (relay zones between faults even maintain their width, without breaking apart). The isolines and tip lines either propagated in a symmetrical or strongly asymmetrical manner (but always in a dextral sense), which we interpret as oblique dextral propagation of the faults. This is in agreement with cylindricity and curvature of the fault surfaces that suggest the fault possess distinct elongated asperities with the same sense of obliquity, with respect to the fault dip azimuth. The distribution of the oblique dextral and dip-slip faults suggests strain partitioning took place on a kilometre scale.

  15. Synthesis, structural and conformational study of new amides derived from 2-methyl-2-azabicyclo[2.2.2]octan-5 syn ( anti) amines

    Science.gov (United States)

    Toledano, M. S.; Fernández, M. J.; Huertas, R.; Gálvez, E.; Server, J.; Cano, F. H.; Bellanato, J.; Carmona, P.

    1997-04-01

    A series of amides derived from syn and anti 2-methyl-2-azabicyclo[2.2.2]octan-5-amines has been synthesized and studied by IR, Raman, 1H and 13C NMR spectroscopy. The crystal structure of 2-methyl-5- syn-(4-quinolinecarboxamide)-2-azabicyclo[2.2.2]octane Id has been determined by X-ray diffraction. It has been found that syn amides present a preferred conformation in CDCl 3 solution, with the CH 3H bond in exo position. This is also observed for compound Id in the solid state. However, for anti amides the CH 3N bond adopts a favoured endo position. A conformational analysis using molecular modelling techniques was undertaken in order to gain additional information.

  16. Petrogenesis of granitoid rocks at the northern margin of the Eastern Ghats Mobile Belt and evidence of syn-collisional magmatism

    Indian Academy of Sciences (India)

    Samarendra Bhattacharya; Rajib Kar; S Moitra

    2004-12-01

    The northern margin of the Eastern Ghats Mobile belt against the Singhbhum craton exposes granitic rocks with enclaves from both the high-grade and low-grade belts. A shear cleavage developed in the boundary region is also observed in these granitoids. Field features and petrography indicate syn-tectonic emplacement of these granitoids. Petrology-mineralogy and geochemistry indicate that some of the granitoids are derived from the high-grade protoliths by dehydration melting. Others could have been derived from low-grade protoliths. Moreover, microstructural signatures in these granitoids attest to their syn-collisional emplacement.

  17. N-(2,5-Dimethylphenylsuccinamic acid monohydrate

    Directory of Open Access Journals (Sweden)

    B. S. Saraswathi

    2011-08-01

    Full Text Available In the title compound, C12H15NO3·H2O, the conformation of the N—H bond in the amide segment is syn to the ortho-methyl group and anti to the meta-methyl group in the benzene ring. Further, the conformations of the amide O and the carbonyl O atom of the acid segment are anti to the adjacent methylene H atoms. The C=O and O—H bonds of the acid group are syn to one another. The structure shows an interesting hydrogen-bonding pattern with the water molecule forming hydrogen bonds with three different molecules of the compound. In the crystal, molecules are packed into infinite chains through intermolecular O—H...O and N—H...O hydrogen bonds.

  18. Undeniable Confirmation of the syn-Addition Mechanism for Metal-Free Diboration by Using the Crystalline Sponge Method.

    Science.gov (United States)

    Cuenca, Ana B; Zigon, Nicolas; Duplan, Vincent; Hoshino, Manabu; Fujita, Makoto; Fernández, Elena

    2016-03-24

    The stereochemical outcome of the recently developed metal-free 1,2-diboration of aliphatic alkenes has, until now, only been elucidated by indirect means (e.g. derivatization). This is because classical conformational analysis of the resulting 1,2-diboranes is not viable; in the (1)H NMR spectrum the relevant (1)H resonances are broadened by (11)B, and the occurrence of the products as oily compounds precludes X-ray crystallographic analysis. Herein, the crystalline sponge method is used to display the crystal structures of the diboronic esters formed from internal E and Z olefins, evidencing the stereospecific syn addition mechanism of the reaction, which is fully consistent with the prediction from DFT calculations.

  19. Death Valley turtlebacks: Mesozoic contractional structures overprinted by Cenozoic extension and metamorphism beneath syn-extensional plutons

    Science.gov (United States)

    Pavlis, T. L.; Miller, M.; Serpa, L.

    2008-07-01

    The term turtleback was first coined to describe the curvilinear fault surfaces that produced a distinctive geomorphic form in the Black Mountains east of Death Valley, and although it was decades before their full significance was appreciated, they remain one of the most distinctive features of the extensional structure of the Death Valley region. Historically the interpretation of the features has varied markedly, and misconceptions about their character continue to abound, including descriptions in popular field guides for the area. It the 1990's, however, the full history of the systems began to be apparent from several key data: 1) the dating of the plutonic assemblage associated with the turtlebacks demonstrated that late Miocene, syn-extensional plutonism was fundamental to their formation; 2) the plutonic assemblage forms an intrusive sheet structurally above the turtlebacks, indicating a tie between much of the high grade metamorphism and Cenozoic plutonism; 3) a modern analog for the syn-extensional plutonism in the Black Mountains was recognized beneath Death Valley with the imaging of a mid-crustal magma body; 4) the Neogene structural history was worked out in the turtlebacks showing that folding of early-formed shear zones formed the turtleback anticlinoria but overprinting by brittle faults produced the final form as they cut obliquely across the older structure; and 5) the pre-extensional structural history was clarified, demonstrating that Mesozoic basement-involved thrust systems are present within the turtlebacks, but have been overprinted by the extensional system. An unresolved issue is the significance of Eocene U-Pb dates for pegmatites within the region, but presumably these relate somehow to the pre-extensional history. Miller and Pavlis (2005; E. Sci. Rev.) reviewed many features of the turtlebacks, and our working model for the region is that the turtlebacks originated as mid-crustal ductile-thrust systems within the Cordilleran fold

  20. 3D modelling of a dolomitized syn-sedimentary structure: an exhumed potential analogue of hydrocarbon reservoir.

    Science.gov (United States)

    Martinelli, Mattia; Franceschi, Marco; Massironi, Matteo; Bistacchi, Andrea; Di Cuia, Raffaele; Rizzi, Alessandro

    2016-04-01

    The decrease in discoveries of new hydrocarbon reservoirs has twofold implications: i) the need to improve our knowledge of classic reservoirs, such as traps within extensional syn-sedimentary structures, and ii) enhanced efforts aimed at better understanding complex type of reservoirs. In particular, in the last few years, fault related dolomitized bodies, often associated to extensional faults, received worldwide attention thanks to the capability of dolomitizing fluids to improve the pore network. However, the shape and geometries of the dolomitized bodies within complex fault network as well as the related porosity distribution and evolution is difficult to predict. The study of outcrop analogues can help to solve these issues. In this work, we focused our attention on the Early Jurassic carbonate sediments of the Calcari Grigi Group deposited on the Trento Platform (Italian Southern Alps). The stratigraphic succession encompasses (from bottom to top): the peritidal limestones of the Monte Zugna Formation, the initially highly porous Loppio Oolitic Limestone and the nearly tight marls and marly limestones of the lower Rotzo Formation. During Early Jurassic, after the deposition of the Loppio Oolitic Limestone, the Trento Platform underwent syn-sedimentary extensional tectonics, which caused the formation of numerous tilted blocks. Differential subsidence of these blocks is testified by abrupt thickness changes in Rotzo Formation. This created a structural framework favourable to the formation of syn-sedimentary extensional traps (with the Loppio Oolitic Limestone as reservoir and Rotzo Formation as seal). In the Tertiary, Alpine compressional tectonics caused the reactivation of the Jurassic faults with a strike slip kinematics and was associated with the circulation of dolomitizing fluids. The combination of these events led to the formation of secondary fault-related dolomitized bodies. The enhanced pore network in correspondence of the dolomitized dykes

  1. SynSen PFT: Synergistic Retrieval of Phytoplankton Functional Types from Space From Hyper-and Multispectral Measurements

    Science.gov (United States)

    Soppa, Mariana A.; Loza, Svetlana N.; Dinter, Tilman; Wolanin, Aleksandra; Bricaud, Annick; Brewein, Robert; Rozanov, Vladimir; Barcher, Astrid

    2016-08-01

    To gain knowledge on the role of marine phytoplankton in the global marine ecosystem and biogeochemical cycles, information on the global distribution of major phytoplankton functional types is essential. The Synergistic Retrieval of Phytoplankton Functional Types from Space from Hyper- and Multispectral Measurements project (SynSenPFT) aims to improve the retrieval of phytoplankton types (PFTs) from space by exploring the synergistic use of low-spatial-hyper- spectral and high-spatial-multi-spectral satellite data. Three PFTs are investigated: diatoms, coccolithophores and cyanobacteria. The work involves the improvement/revision of existing PFT algorithms based on hyper- (PhytoDOAS, [1]) and multi-spectral (OC- PFT, [2]) datasets, development of synergistic PFT products combining the retrievals of these two algorithms and intercomparison of the synergistic PFT products with those derived from other methods [3,4,5].

  2. High occurrence of Calodium hepaticum (syn. Capillaria hepatica spurious infection in a village in the Atlantic Forest of southern Brazil

    Directory of Open Access Journals (Sweden)

    Débora do Rocio Klisiowicz

    2014-06-01

    Full Text Available Calodium hepaticum (syn. Capillaria hepatica is a nematode of the Capillariidae family that infects rodents and other mammals. In Brazil, human spurious infections of C. hepaticum have been detected in indigenous or rural communities from the Amazon Basin, but not in the southern states of the country. Here, we report the highest occurrence (13.5% of 37 residents of C. hepaticum human spurious infection detected in Brazil and the first record in a southern region, Guaraqueçaba. The finding is explained by the area being located in the Atlantic Forest of the state of Paraná, surrounded by preserved forests and because the inhabitants consume the meat of wild mammals.

  3. Glucocorticosteroids do not impact directly growth rate and biomass of Rhizopus arrhizus (syn. R. oryzae) in vitro.

    Science.gov (United States)

    Bellanger, A P; Minetos, Y D; Albert, N; Shirazi, F; Walsh, T J; Kontoyiannis, D P

    2015-01-01

    Glucocorticoid (GC) use is a common risk factor for invasive fungal infections. This is attributed to the complex dysregulation of immunity caused by GCs. However, studies have demonstrated increased growth with GC exposure for some molds, such as Aspergillus fumigatus and Exserohilum rostratum. No such data exist for Mucorales. Therefore, we investigated the influence of GC exposure on the growth of Rhizopus arrhizus (syn. R. oryzae) in different culture media and in different atmospheres. We measured continuous spore growth using spectrophotometry and biomass variations using XTT assay. We did not observe enhanced growth or biomass variation with any of the GCs regardless of the medium or conditions. These results support the existence of fungus-specific differences in the effect of GCs on fungal biology.

  4. How vein sealing boosts fracture widening rates - The buckling-enhanced aperture growth mechanism for syn-tectonic veins

    Science.gov (United States)

    Nüchter, Jens-Alexander

    2017-01-01

    The paper introduces the mechanism of buckling-enhanced aperture growth for syn-tectonic veins that formed in simple-shear dominated kinematic frameworks in the middle or lower crust. Apart from the well understood concepts of fracture widening driven by effective tensile stresses, buckling-enhanced fracture aperture growth relates widening to active outward buckling of more viscous incipient cement layers precipitated as hydrothermal minerals for the pore fluid on the walls of juvenile syn-tectonic veins, driven by fracture-parallel compressive creep strain in the host rocks. Thus, the mechanism proposed here follows similar principles as tectonic folding, although important differences exist. Inspired by the structural record of low-aspect ratio veins exposed in HP/LT metamorphic rocks cropping out on south Evia island, Greece, generic numerical models are calculated to study development of buckling instabilities in such incompletely cemented veins and their impact on aperture growth rates. The models indicate (1) that aperture growth rates increase with increasing viscosity contrast between the host rocks and the cement layers, (2) an increase in the thickness of the cement layers cause acceleration of aperture growth, (3) that support of restraining forces at the vein tips offered by the host rocks against buckling of the cement layers cause fully compressive states of stress ahead the fracture tips, and (4) that fracture aperture growth is possible against fully compressive fracture-normal stresses. The buckling-enhanced vein aperture growth mechanism yields important implications for the maintenance and decay of fracture-bound permeability and for the mechanical state of the middle and lower crust in seismically active regions.

  5. Isolation of fatty acids and aromatics from cell suspension cultures of Lavandula angustifolia.

    Science.gov (United States)

    Topçu, Gülaçti; Herrmann, Gabriele; Kolak, Ufuk; Gören, C; Porzel, Andrea; Kutchan, Toni M

    2007-02-01

    Cell suspension cultures of Lavandula angustifolia Mill. ssp. angustifolia (syn.: L. officinalis Chaix.) afforded a fatty acid composition, cis and trans p-coumaric acids (=p-hydroxy cinnamic acids), and beta-sitosterol. The fatty acid composition was analyzed by GC-MS, and the structures of the isolated three compounds were determined by 1H- and 13C-NMR, and MS spectroscopic techniques.

  6. An asymmetric route to 2,3-epoxy-syn-1,4-cyclohexane diol derivatives using ring closing metathesis (RCM)

    Indian Academy of Sciences (India)

    Soumitra Maity; Subrata Ghosh

    2010-11-01

    An asymmetric route for the synthesis of highly functionalized 2,3-epoxy-syn-1,4-cyclohexane diol derivatives present in some polyketide natural products has been developed. The key step involves RCM of an appropriately constructed 1,7-dienol derived from D-mannitol to cyclohexane-1,4-diol followed by its stereoselective epoxidation.

  7. Direct Syn Addition of Two Silicon Atoms to a C≡C Triple Bond by Si-Si Bond Activation: Access to Reactive Disilylated Olefins.

    Science.gov (United States)

    Ahmad, Maha; Gaumont, Annie-Claude; Durandetti, Muriel; Maddaluno, Jacques

    2017-02-20

    A catalytic intramolecular silapalladation of alkynes affords, in good yields and stereoselectively, syn-disilylated heterocycles of different chemical structure and size. When applied to silylethers, this reaction leads to vinylic silanols that undergo a rhodium-catalyzed addition to activated olefins, providing the oxa-Heck or oxa-Michael products, depending on the reaction conditions.

  8. BF3·OEt2-mediated syn-selective Meyer-Schuster rearrangement of phenoxy propargyl alcohols for Z-β-aryl-α,β-unsaturated esters.

    Science.gov (United States)

    Puri, Surendra; Hari Babu, Madala; Sridhar Reddy, Maddi

    2016-08-07

    Synthesis of Z-β-aryl-α,β-unsaturated esters from readily available 1-aryl-3-phenoxy propargyl alcohols is achieved via a BF3-mediated syn-selective Meyer-Schuster rearrangement under ambient conditions. The reaction mechanism is postulated to involve an electrophilic borylation of an allene intermediate as the key step to kinetically control the stereoselectivity.

  9. Syn-Rift Stratigraphic Architecture Reveals the Growth History of a Sub-basinal Fault Population in the Outer Moray Firth, North Sea

    Science.gov (United States)

    Kane, K.; Gupta, S.; Trudgill, B.; Johnson, H.

    2003-12-01

    Processes of normal fault propagation and linkage are recorded in the stratigraphic record by syn-rift sedimentary deposits that fill the generated accommodation volume. Using 3D seismic stratigraphic analysis, supported by well log and core interpretation, we investigate how the growth of an intrabasinal fault population led to the progressive development of an extensional sub-basin in the Moray Firth rift arm of the North Sea. The North Halibut Graben sub-basin has an E-W to WNW-ESE orientation and formed through the interaction of two main structural trends during late Jurassic rifting. E-W trending structural barriers bound the sub-basin to the north (Tartan and Petronella Ridges) and south (Halibut Horst Spur) whilst major NE-SW trending structures occur at the eastern margin. Spatial and temporal changes in syn-rift stratigraphic architecture reflect the history of faulting within the North Halibut Graben sub-basin. Fault parallel seismic profiles and intra-syn rift isochron maps demonstrate how faults initially developed as separate segments and subsequently linked to form longer strands through progressive growth and propagation. They also provide clear evidence that a major change in the structural framework occurred during rifting, supporting earlier studies advocating sequential rather than synchronous normal fault activity. The syn-rift sequence can be divided into at least two phases based on shifts in sedimentary packages and reorganistation of sequence thicknesses. Isochron maps illustrate that from late Oxfordian times (syn-rift phase I), early syn-rift sedimentation was controlled solely by NE-SW trending faults at the eastern margin of the basin. Strain was initially accommodated across several distributed, highly segmented faults but, with progressive linkage, stress became localised on one or two major through-going fault strands whilst shorter surrounding segments were switched off. From early-mid Volgian times we observe a progressive switch

  10. N-(3-Methylphenylsuccinamic acid

    Directory of Open Access Journals (Sweden)

    B. Thimme Gowda

    2010-02-01

    Full Text Available In the crystal structure of the title compound, C11H13NO3, the conformations of the N—H and C=O bonds in the amide segment are anti to each other, and that of the amide H atom is anti to the meta-methyl group in the benzene ring. Furthermore, the conformations of the amide oxygen and the carbonyl O atom of the acid segment are also anti to the adjacent –CH2 groups. The C=O and O—H bonds of the acid group are syn to each other. In the crystal, the molecules are packed into infinite chains through intermolecular N—H...O and O—H...O hydrogen bonds.

  11. Does the tautomeric status of the adenine bases change upon the dissociation of the A*·A(syn) Topal-Fresco DNA mismatch? A combined QM and QTAIM atomistic insight.

    Science.gov (United States)

    Brovarets', Ol'ha O; Zhurakivsky, Roman O; Hovorun, Dmytro M

    2014-02-28

    We have scrupulously explored the tautomerisation mechanism via the double proton transfer of the A*·A(syn) Topal-Fresco base mispair (C(s) symmetry), formed by the imino and amino tautomers of the adenine DNA base in the anti- and syn-conformations, respectively, bridging quantum-mechanical calculations with Bader's quantum theory of atoms in molecules. It was found that the A*·A(syn) ↔ A·A*(syn) tautomerisation is the asynchronous concerted process. It was established that the A*·A(syn) DNA mismatch is stabilized by the N6H···N6 (6.35) and N1H···N7 (6.17) hydrogen (H) bonds, whereas the A·A*(syn) base mispair (Cs) by the N6H···N6 (8.82) and N7H···N1 (9.78) H-bonds and the C8H···HC2 HH-bond (0.30 kcal mol(-1)). Using the sweeps of the energies of the intermolecular H-bonds, it was observed that the N6H···N6 and N1H···N7/N7H···N1 H-bonds are anti-cooperative and mutually weaken each other in the A*·A(syn) and A·A*(syn) mispairs. It was revealed that the A·A*(syn) DNA mismatch is a dynamically unstable structure with a short lifetime of 1.12 × 10(-13) s and any of its 6 low-frequency intermolecular vibrations can develop during this period of time. This observation makes it impossible to change the tautomeric status of the A bases upon the dissociation of the A*·A(syn) base mispair into the monomers during DNA replication.

  12. Strain Localization Within a Syn-Tectonic Pluton in a Back-Arc Extensional Context: the Naxos granodiorite (Cyclades, Greece)

    Science.gov (United States)

    Bessiere, Eloïse; Rabillard, Aurélien; Arbaret, Laurent; Jolivet, Laurent; Augier, Romain; Menant, Armel

    2016-04-01

    Naxos Island is part of the central Cyclades (Aegean Sea, Greece) where a series of migmatite-cored metamorphic domes were exhumed below large-scale detachment systems during a Cenozoic back-arc extension. On Naxos, the Miocene exhumation history of the high-temperature metamorphic dome was notably achieved through two anastomosing and closely spaced top-to-the-north detachments belonging to the Naxos-Paros detachment system. According to previous contributions, the late exhumation stages were accompanied by the emplacement of a syn-kinematic I-type granodiorite that intruded a ductile-then-brittle detachment. Later the detachment migrated at the interface between the pluton and the metamorphic unit under ductile-to-brittle conditions. To clarify how extensional deformation was precisely distributed within the pluton, a multi-scale approach from field observations to laboratory investigations was undertaken. Through macro- to micro-structural observations, we show a continuous deformation history from magmatic to solid-state ductile/brittle conditions under an overall north-directed shearing deformation. The early magmatic or sub-solidus deformation is evidenced in a large part of the granodiorite, notably in its southern part where the original intrusive contact is still preserved. Solid-state deformation is recorded further north when approaching the detachment zone, highlighted by a thicker cataclastic zone and numerous pseudotachylite veins. From these field observations, we defined six strain facies, leading us to propose a qualitative strain map of the Naxos granodiorite. Based on field pictures and X-ray tomography of oriented samples collected along the strain gradient, we quantified the intensity of mineralogical fabrics in 2D and 3D. This step required the treatment of 600 rocks samples and pictures using SPO2003 (Shape Preferred Orientation) and Intercepts2003. Measured shape variations of the strain ellipsoid thus corroborate the large-scale strain

  13. Flavonones from Helichrysi flos syn.%沙生蜡菊花中的二氢黄酮类成分

    Institute of Scientific and Technical Information of China (English)

    王立波; 森川敏生; 高慧媛; 孙博航; 黄健; 吉川雅之; 吴立军

    2009-01-01

    AIM: To study the chemical constituents of Helichrysiflos syn. METHOD: The chemical constituents were isolated by various methods of isolation (silica gel, ODS and HPLC column chromatography) and their structures were elucidated by the analysis of spectral data, CD spectral data and chemical properties. RESULT: Eight flavonones compounds were isolated from the MeOH extract of Helichrysi flos syn. The chemical structures were elucidated as (2S)-Helichrysin A (1), (2R)-Helichrysin A (2), (2S)-Naringenin-7-O-β-D-glucopyranoside (3), (2R,3R)-Dihydrokaempferol 7-O-β-D-glucoside (4), Helicioside A (5), (2R)-Eriodictyol-5-O-β-D-glucoside (6), (2S)-Naringenin-5,7-di-O-β-D-glucoside (7), (2R)-Naringenin-5,7-di-O-β-D-glucoside (8). CONCLUSION: Compound 4~8 were obtained from Helichrysum Mill. for the first time, compound 2, 3 were obtained from Helichrysum arenarium (L.) MOENCH for the first time.%目的:研究沙生蜡菊花的化学成分.方法:采用多种色谱方法(硅胶柱色谱、ODS柱色谱和HPLC柱色谱)分离纯化,依据理化性质、核磁数据分析并结合CD谱进行结构鉴定.结果:从沙生蜡菊花的甲醇提取物中分离得到8个二氢黄酮类化合物,分别鉴定为(2S)-Helichrysin A(1)、(2R)-Helichrysin A(2)、Naringenin-7-O-β-D-glucopyranoside(3)、(2R,3R)-Dihydrokaempferol-7-Oβ-D-glucoside(4)、Helicioside A(5), (2R)-Eriodictyol-5-O-β-D-glucoside(6)、(2S)-Naringenin-5,7-di-O-β-D-glucoside(7)、(2R)-Naringenin-5,7-di-O-β-D-glucoside(8).结论:化合物4~8为从该属植物中首次分离得到的化合物,化合物2、3为从该植物中首次分离得到的化合物.

  14. N-(4-Methyl-2-nitrophenylsuccinamic acid

    Directory of Open Access Journals (Sweden)

    Sabine Foro

    2012-03-01

    Full Text Available In the title compound, C11H12N2O5, the conformation of the N—H bond in the amide segment is syn to the ortho-nitro group in the benzene ring. The amide C=O and the carboxyl C=O of the acid segment are syn to each other and both are anti to the H atoms on the adjacent –CH2 groups. Furthermore, the C=O and O—H bonds of the acid group are in syn positions with respect to each other. The dihedral angle between the benzene ring and the amide group is 36.1 (1°. The amide H atom shows bifurcated intramolecular hydrogen bonding with an O atom of the ortho-nitro group and an intermolecular hydrogen bond with the carbonyl O atom of another molecule. In the crystal, the N—H...O(C hydrogen bonds generate a chain running along the [100] direction. Inversion dimers are formed via a pair of O—H...O(C interactions, that form an eight-membered hydrogen-bonded ring involving the carboxyl group.

  15. Stereoselectivities in α- and β-Amino Acids Catalyzed Mannich Reactions Involving Cyclohexanone

    Institute of Scientific and Technical Information of China (English)

    WANG Ying; FU Ai-ping; LI Hong-liang; TIAN Feng-hui; YUAN Shu-ping; SI Hong-zong; DUAN Yun-bo; WANG Zong-hua

    2011-01-01

    The effects of two different amino acid catalysts on the stereoselectivities in the direct Mannich reactions of cyclohexanone,p-anisidine and p-nitrobenzaldehyde were studied with the aid of density functional theory.Transition states of the stereo-determining C-C bond-forming step with the addition of enamine intermediate to the imine for the L-proline(α-amino acid) and (R)-3-pyrrolidinecarboxylic acid(β-amino acid)-catalyzed processes were reported.B3LYP/6-31G** calculations provide a good explanation for the opposite syn vs.anti diastereoselectivities of these two different kinds of catalysts(syn-selectivity for the α-amino acid catalysts,anti-selectivity for the β-amino acid catalysts).Calculated and observed diastereomeric ratio and enantiomeric excess values are in reasonable agreement.

  16. 40Ar/39Ar geochronological constraints on syn-orogenic strike-slip movement of Tan-Lu fault zone

    Institute of Scientific and Technical Information of China (English)

    ZHU Guang; LIU Guosheng; W. J. Dunlap; C. Teyssier; WANG Yongsheng; NIU Manlan

    2004-01-01

    Two phases of sinistral strike-slip ductile shear belts occur on the eastern margin of the Dabie orogenic belt.A muscovite 40Ar/39Ar plateau age of 128 Ma was obtained from mylonite in the later ductile shear zone. Three muscovite samples separated from mylonites of 3 localities in the earlier ductile shear belts yield 40Ar/39Ar plateau ages of 192.5±0.7 Ma, 189.7±0.6 Ma and 188.7±0.7 Ma, respectively. They are interpreted as cooling ages of the earlier sinistrai strike-slip deformation. It is suggested that left-lateral displacement of the Tan-Lu fault zone started in a late stage of the collision orogeny in the Dabie-Sulu orogenic belt between the North and South China plates. Therefore, the earlier Tan-Lu fault zone was syn-orogenic strike-slip tectonics.The fault zone was used again for sinistral displacement during tectonic activities of peri-Pacific regime in Early Cretaceous. It is proposed that the fault zone occurred as a transform fault during the orogenic process.

  17. Mapping lacustrine syn-rift reservoir distribution using spectral attributes: A case study of the Pematang Brownshale Central Sumatra Basin

    Science.gov (United States)

    Haris, A.; Yustiawan, R.; Riyanto, A.; Ramadian, R.

    2017-07-01

    Pematang Brownshale is the lake sediment, which is proven as the main source rock in Malacca Strait Area. So far Brownshale is only considered as source rock, but the well data show intercalated sand layers encountered within the Pematang Brownshale, where several downhole tests proved this series as a potential hydrocarbon reservoir. Pematang formation is a syn-rift sequent deposited in Malacca Strait following the opening of central Sumatra basin during a late cretaceous to early Oligocene, which is proven as potential source rock and reservoir. The aim of the study is to identify the distribution of sandstone reservoir in Pematang Brownshale using spectral attributes. These works were carried out by integrating log data analysis and frequency maps extracted from spectral attributes Continuous Wavelet Transform (CWT). All these data are used to delineate reservoir distribution in Pematang Brownshale. Based on CWT analysis the anomalies are only visible on the frequency of I5 and I0 Hz maps, which are categorized as low frequencies. Low-frequency shadow anomaly is commonly used as an indication of the presence of hydrocarbons. The distribution of these anomalies is covering an area of approximately 3840.66 acres or equal to I554.25 sq. km, where the low-frequency pattern is interpreted as a deltaic lacustrine feature. By considering the Pematang Brown Shale of Malacca Strait area as a potential reservoir, it would open new play to another basin that has similar characteristics.

  18. Thermal evolution of the syn-tectonic Ainsa-Jaca basin (South Pyrenean Zone). New constraints from a multiproxy approach.

    Science.gov (United States)

    Lahfid, A.; Lacroix, B.; Hoareau, G.; Meresse, F.; Michel, K.; Buatier, M.

    2012-04-01

    Constraining the Thermal history of tectonically active basins is of special importance for the petroleum industry. Indeed, the estimation of geothermal gradients and their evolution are basic parameters to understand the tectono-sedimentary evolution of fold-and-thrust belts and associated foreland basins. In this work, we focus on the turbiditic deposits of the Ainsa-Jaca basin (western part of the South Pyrenean Zone) which consist of an accreted foreland basin composed of Eocene syn-tectonic sediments. The aim is to quantify peak temperatures of the basin that underwent late diagenesis and low-grade metamorphism conditions during the Pyrenean activity. For this, turbiditic rocks and calcite veins (extensional and shear veins) were systematically sampled along a section over a thickness of 4 km through the Monte Perdido unit. In order to constrain the structures observed, sampling was accompanied with a detailed structural analysis. We have combined three thermometric indicators to evaluate peak temperature of rocks: Raman thermometry on carbonaceous material, fluid inclusion microthermometry on calcite/quartz shear and extensional veins and compositional chlorite thermometry on Fe-chlorite observed in shear veins. The Raman temperatures obtained show variations ranging from Jaca basin do not seem so obvious and need to be carefully used. In order to better constrain the thermal history of South Pyrenean Zone, we are currently working on the acquisition of more data.

  19. Geochemical signature variation of pre-, syn-, and post-shearing intrusives within the Najd Fault System of western Saudi Arabia

    Science.gov (United States)

    Hassan, M.; Abu-Alam, T. S.; Hauzenberger, C.; Stüwe, K.

    2016-10-01

    Late Precambrian intrusive rocks in the Arabian-Nubian Shield emplaced within and around the Najd Fault System of Saudi Arabia feature a great compositional diversity and a variety of degrees of deformation (i.e. pre-shearing deformed, sheared mylonitized, and post-shearing undeformed) that allows placing them into a relative time order. It is shown here that the degree of deformation is related to compositional variations where early, usually pre-shearing deformed rocks are of dioritic, tonalitic to granodioritic, and later, mainly post-shearing undeformed rocks are mostly of granitic composition. Correlation of the geochemical signature and time of emplacement is interpreted in terms of changes in the source region of the produced melts due to the change of the stress regime during the tectonic evolution of the Arabian-Nubian Shield. The magma of the pre-shearing rocks has tholeiitic and calc-alkaline affinity indicating island arc or continental arc affinity. In contrast, the syn- and post-shearing rocks are mainly potassium rich peraluminous granites which are typically associated with post-orogenic uplift and collapse. This variation in geochemical signature is interpreted to reflect the change of the tectonic regime from a compressional volcanic arc nature to extensional within-plate setting of the Arabian-Nubian Shield. Within the context of published geochronological data, this change is likely to have occurred around 605-580 Ma.

  20. Structural and thermodynamics characters of isolated α-syn12 peptide: long-time temperature replica-exchange molecular dynamics in aqueous solution

    Institute of Scientific and Technical Information of China (English)

    Zanxia Cao; Lei Liu; Ping Wu; Jihua Wang

    2011-01-01

    The structural and thermodynamics characters of α-syn12 (residues 1-12 of the human α-synuclein protein) peptide in aqueous solution were investigated through temperature replica-exchange molecular dynamics (T-REMD) simulations with the GROMOS 43A1 force field. The two independent T-REMD simulations were completed starting from an initial conformational α-helix and an irregular structure,respectively. Each replica was run for 300ns. The structural and thermodynamics characters were studied based on parameters such as distributions of backbone dihedral angles, free energy surface, stability of folded β-hairpin structure, and favorite conformations. The results showed that the isolated α-syn12 peptide in water adopted four different conformational states: the first state was a β-hairpin ensemble with Turno-6 and four hydrogen bonds, the second state was a β-hairpin ensemble with two turns (Turn9-6 and Turn5-2) and three hydrogen bonds, the third state was a disordered structure with both Turn8-5 and Turn5-2, and the last state was a π-helix ensemble. Meanwhile, we studied the free energy change of α-syn12 peptide from the unfolded state to the β-hairpin state, which was in good agreement with the experiments and molecular dynamics simulations for some other peptides. We also analyzed the driving force of the peptide transition.The results indicated that the driving forces were high solvent exposure of hydrophobic Leu8 and hydrophobic residues in secondary structure. To our knowledge, this was the first report to study the isolated α-syn12 peptide in water by T-REMD.

  1. Miniundersøgelse 18 børns syn på skolen i skoleåret 2015-2016

    DEFF Research Database (Denmark)

    Broström, Stig

    Selv om der således er variation blandt børnenes svar er der alligevel belæg for at sige, at hovedparten af børnene: - udtrykker et kritisk syn på indførelse af lektiecafeen - har begrænsede oplevelser af pædagogens virke og iværksættelse af alternative aktiviteter - kun i begrænset omfang har op...

  2. Acquiring research-grade ERPs on a shoestring budget: A comparison of a modified Emotiv and commercial SynAmps EEG system.

    Science.gov (United States)

    Barham, Michael P; Clark, Gillian M; Hayden, Melissa J; Enticott, Peter G; Conduit, Russell; Lum, Jarrad A G

    2017-09-01

    This study compared the performance of a low-cost wireless EEG system to a research-grade EEG system on an auditory oddball task designed to elicit N200 and P300 ERP components. Participants were 15 healthy adults (6 female) aged between 19 and 40 (M = 28.56; SD = 6.38). An auditory oddball task was presented comprising 1,200 presentations of a standard tone interspersed by 300 trials comprising a deviant tone. EEG was simultaneously recorded from a modified Emotiv EPOC and a NeuroScan SynAmps RT EEG system. The modifications made to the Emotiv system included attaching research grade electrodes to the Bluetooth transmitter. Additional modifications enabled the Emotiv system to connect to a portable impedance meter. The cost of these modifications and portable impedance meter approached the purchase value of the Emotiv system. Preliminary analyses revealed significantly more trials were rejected from data acquired by the modified Emotiv compared to the SynAmps system. However, the ERP waveforms captured by the Emotiv system were found to be highly similar to the corresponding waveform from the SynAmps system. The latency and peak amplitude of N200 and P300 components were also found to be similar between systems. Overall, the results indicate that, in the context of an oddball task, the ERP acquired by a low-cost wireless EEG system can be of comparable quality to research-grade EEG acquisition equipment. © 2017 Society for Psychophysiological Research.

  3. The SYN flooding Attack Principle and Its Precautions%SYN洪泛攻击原理及其防范策略

    Institute of Scientific and Technical Information of China (English)

    陶涛

    2012-01-01

      The SYN flooding attack, which are currently the focus of research of the network security circle, are a virulent, rela⁃tively new type of attack on the availability of Internet services and resources. The TCP SYN flooding attack is among the most popular DoS attack methods. The author makes a comprehensive study of the TCP SYN attack and its countermeasurements and proposes a new comprehensive attack detection technology, which can beat this kind of attack effectively.%  SYN洪泛攻击是出现在这几年的一种具有很强攻击力而又缺乏有效防御手段的Internet攻击手段,是目前网络安全界研究的热点.TCP SYN洪流攻击是最常见的DoS攻击手段之一.文中着重对TCP SYN洪流攻击及其防范措施进行了深入研究,提出了一种新的综合攻击检测技术,较好地解决了对此类攻击的防范问题.

  4. Investigation of molecular interactions in the complex formation of tartaric acid derivatives with di(2-ethylhexyl) phosphoric acid

    Institute of Scientific and Technical Information of China (English)

    2008-01-01

    The molecular interactions in the complex formation of two tartaric acid derivatives with di(2-ethylhexyl) phosphoric acid are investigated. The complex formation with a 1:1 stoichiometry between tartaric acid derivatives and D2EHPA can be obtained through UV-Vis titration, NMR chemical shifts and molecular dynamic simulations. Furthermore, the differences of the two complexes on the binding constants and strength of hydrogen bonds can also be determined. Such research will ideally provide insight into ways of regulating the complex forming properties of tartaric acid derivatives for composing or syn- thesizing new chiral resolving agents.

  5. Investigation of molecular interactions in the complex formation of tartaric acid derivatives with di(2-ethylhexyl) phosphoric acid

    Institute of Scientific and Technical Information of China (English)

    TAN Bin; ZHAI Zheng; LUO GuangSheng; WANG JiaDing

    2008-01-01

    The molecular interactions in the complex formation of two tartaric acid derivatives with di(2-ethylhexyl) phosphoric acid are investigated. The complex formation with a 1:1 stoichiometry between tartaric acid derivatives and D2EHPA can be obtained through UV-Vis titration, NMR chemical shifts and molecular dynamic simulations. Furthermore, the differences of the two complexes on the binding constants and strength of hydrogen bonds can also be determined. Such research will ideally provide insight into ways of regulating the complex forming properties of tartaric acid derivatives for composing or syn-thesizing new chiral resolving agents.

  6. Combining Experimental Petrology and 3D Imaging to Gain Insight into Syn-eruptive Conditions of the Bishop Tuff, California

    Science.gov (United States)

    Chattin, Archer; Pamukcu, Ayla; Gardner, James; Gualda, Guilherme

    2015-04-01

    The Bishop tuff is a rhyolitic ignimbrite deposited by a supereruption 0.76 million years ago that formed the Long Valley Caldera in California, USA. Pamukcu et. al (2012) identifies two distinct crystal populations present in the Bishop Tuff, the first being a long-lived, large phenocryst population that records storage conditions, and the second a rapidly nucleated, quickly staunched microlite population thought to result from eruptive decompression. Laboratory experiments to reproduce this quickly grown population may help constrain the conditions and rates under which decompression took place. Rapid nucleation of microlites is accompanied by just as rapid bubble nucleation when volatiles exsolve during decompression; the size distribution of vesicles in eruptive products may thus provide important information on syn-eruptive processes. In this study we combine information from vesicle size distributions on natural pumice with data on experimentally produced microlite crystals with the goal of better understanding the syn-eruptive evolution of a supereruption-forming magma body. Decompression experiments are run using a natural Bishop tuff pumice clast ground and melted in the presence of water to obtain a melt representative of late-erupted Bishop Tuff (LBT) magmas. Experimental charges were subjected to decompression at varying rates and initial temperatures. At this time five experiments have been completed. All decompression experiments start at 130MPa, consistent with water concentration in LBT glass inclusions, and end at 10 MPa. Initial temperatures are either 710°C or 785°C, while decompression rates are 20 MPa/hr, 5.5MPa/hr, or 1.7MPa/hr Experimental products were compared to natural products using Scanning Electron Microscopy to document eventual crystal rims and microlites. We have been successful in causing limited feldspar crystallization, but have yet to generate quartz microlites. Bubble size distributions are obtained by analyzing x

  7. Syn-metamorphic interconnected porosity during blueschist facies reactive fluid fluxes at the slab-mantle interface

    Science.gov (United States)

    Konrad-Schmolke, Matthias; Klitscher, Nicolai; Halama, Ralf; Wirth, Richard; Morales, Luiz

    2017-04-01

    At the slab-mantle interface in subdution zones fluids released from the downgoing plate infiltrate into a mechanical mixture of rocks with different chemical compositions, different hydration states and different rheological behaviour resulting in a highly reactive mélange within a steep temperature gradient. Fluid pathways, reaction mechanisms and reaction rates of such fluxes, however, are poorly known, although these parameters are thought to be crucial for several seismic phenomena, such as those commonly referred to as slow earthquakes (e.g., episodic tremor and slip (ETS)). We discovered syn-metamorphic fluid-pathways in the form of interconnected metamorphic porosity in eclogite and blueschist facies mélange rocks from the Franciscan Complex near Jenner, CA. The sampled rocks occur as rigid mafic blocks of different sizes (cm to decametre) in a weak chlorite-serpentine matrix interpreted to be an exhumed slab-mantle interface. Some of these mafic blocks record reactive fluid infiltration that transforms dry eclogite into hydrous blueschist with a sharp reaction front clearly preserved and visible from outcrop- down to µm-scale. We can show that a number of interconnected fluid pathways, such as interconnected metamorphic porosity between reacting omphacite and newly formed sodic amphibole enabled fluid infiltration and interface coupled solution-reprecipitation reactions at blueschist facies conditions. We investigated the different types of fluid pathways with TEM and visualized their interconnectivity with 3D focused ion beam (FIB) sections. The eclogitic parts of the samples preserve porous primary omphacite as a product of amphibole and epidote breakdown during subduction. This primary porosity in omphacite I results from a negative volume change in the solids during amphibole and epidote dehydration. The resulting pores appear as (fluid filled) elongated inclusions the orientations of which are controlled by the omphacite lattice. During

  8. Structures of Syn-deformational Granites in the Longquanguan Shear Zone and Their Monazite Electronic Microprobe Dating

    Institute of Scientific and Technical Information of China (English)

    ZHANG Jinjiang; ZHAO Lan; LIU Shuwen

    2006-01-01

    The Longquanguan shear zone is an important structural belt in the North China Craton,separating the underlying Fuping complex from the overlying Wutai complex. This shear zone has experienced three episodes of deformation: the first and main episode is a ductile top-to-ESE shear along the gently northwest-west dipping foliations, while the other two episodes are later collapse sliding. Prolonged granites parallel to the shear foliations make one of the main compositions of the Longquanguan shear zone. These granites experienced deformation to form mylonitic rocks when they emplaced during the first episode of deformation. Structural characters of the granites and their contacts to the country rocks indicate that these granites possibly resulted from in-situ partial remelting by shearing, i.e., they are syn-deformational granites. Monazites in these mylonitic granites are magmatic minerals and their crystallization ages may represent ages of the magmatic events, and also the ages for the main deformation of the Longquanguan shear zone. Monazite electronic microprobe dating were carried on two samples of granite, which gives multiple peak ages, among which 1,846 Ma and 1,877 Ma are the main peak ages for the two samples. These ages represent the main deformation of the Longquanguan shear zone, which is consistent with the main regional geological event at about 1,850 Ma caused by the collision between the Eastern and Western Blocks in North China. The good match between the monazite ages and the corresponding regional tectono-thermal events shows the feasibility and reliability of monazite electronic microprobe dating.

  9. The Oral β-Lactamase SYN-004 (Ribaxamase) Degrades Ceftriaxone Excreted into the Intestine in Phase 2a Clinical Studies

    Science.gov (United States)

    Roberts, Tracey; Coughlin, Olivia; Sicard, Eric; Rufiange, Marianne; Fedorak, Richard; Carter, Christian; Adams, Marijke H.; Longstreth, James; Whalen, Heidi; Sliman, Joseph

    2017-01-01

    ABSTRACT SYN-004 (ribaxamase) is a β-lactamase designed to be orally administered concurrently with intravenous β-lactam antibiotics, including most penicillins and cephalosporins. Ribaxamase's anticipated mechanism of action is to degrade excess β-lactam antibiotic that is excreted into the small intestine. This enzymatic inactivation of excreted antibiotic is expected to protect the gut microbiome from disruption and thus prevent undesirable side effects, including secondary infections such as Clostridium difficile infections, as well as other antibiotic-associated diarrheas. In phase 1 clinical studies, ribaxamase was well tolerated compared to a placebo group and displayed negligible systemic absorption. The two phase 2a clinical studies described here were performed to confirm the mechanism of action of ribaxamase, degradation of β-lactam antibiotics in the human intestine, and were therefore conducted in subjects with functioning ileostomies to allow serial sampling of their intestinal chyme. Ribaxamase fully degraded ceftriaxone to below the level of quantitation in the intestines of all subjects in both studies. Coadministration of oral ribaxamase with intravenous ceftriaxone was also well tolerated, and the plasma pharmacokinetics of ceftriaxone were unchanged by ribaxamase administration. Since ribaxamase is formulated as a pH-dependent, delayed-release formulation, the activity of ribaxamase in the presence of the proton pump inhibitor esomeprazole was examined in the second study; coadministration of these drugs did not adversely affect ribaxamase's ability to degrade ceftriaxone excreted into the intestine. These studies have confirmed the in vivo mechanism of action of ribaxamase, degradation of β-lactam antibiotics in the human intestine (registered at ClinicalTrials.gov under NCT02419001 and NCT02473640). PMID:28052855

  10. Deformation and thermal histories of ordinary chondrites: Evidence for post-deformation annealing and syn-metamorphic shock

    Science.gov (United States)

    Ruzicka, Alex; Hugo, Richard; Hutson, Melinda

    2015-08-01

    We show that olivine microstructures in seven metamorphosed ordinary chondrites of different groups studied with optical and transmission electron microscopy can be used to evaluate the post-deformation cooling setting of the meteorites, and to discriminate between collisions affecting cold and warm parent bodies. The L6 chondrites Park (shock stage S1), Bruderheim (S4), Leedey (S4), and Morrow County (S5) were affected by variable shock deformation followed by relatively rapid cooling, and probably cooled as fragments liberated by impact in near-surface settings. In contrast, Kernouvé (H6 S1), Portales Valley (H6/7 S1), and MIL 99301 (LL6 S1) appear to have cooled slowly after shock, probably by deep burial in warm materials. In these chondrites, post-deformation annealing lowered apparent optical strain levels in olivine. Additionally, Kernouvé, Morrow County, Park, MIL 99301, and possibly Portales Valley, show evidence for having been deformed at an elevated temperature (⩾800-1000 °C). The high temperatures for Morrow County can be explained by dynamic heating during intense shock, but Kernouvé, Park, and MIL 99301 were probably shocked while the H, L and LL parent bodies were warm, during early, endogenically-driven thermal metamorphism. Thus, whereas the S4 and S5 chondrites experienced purely shock-induced heating and cooling, all the S1 chondrites examined show evidence for static heating consistent with either syn-metamorphic shock (Kernouvé, MIL 99301, Park), post-deformation burial in warm materials (Kernouvé, MIL 99301, Portales Valley), or both. The results show the pitfalls in relying on optical shock classification alone to infer an absence of shock and to construct cooling stratigraphy models for parent bodies. Moreover, they provide support for the idea that "secondary" metamorphic and "tertiary" shock processes overlapped in time shortly after the accretion of chondritic planetesimals, and that impacts into warm asteroidal bodies were

  11. Characterization of the relA/spoT homologue slr1325 (syn-rsh) of the cyanobacterium Synechocystis sp.PCC6803%集胞藻PCC6803中relA/spoT同源基因syn-rsh(slr1325)的鉴定

    Institute of Scientific and Technical Information of China (English)

    缪小刚; 刘惠玲; 宁德刚

    2011-01-01

    [目的]四磷酸或五磷酸鸟苷(Guanosine 3′,5′-bispyrophosphate,(p)ppGpp)是细菌在遭遇环境胁迫时细胞产生应激反应的信号分子,(p)ppGpp由其合成酶RelA或具有合成酶或水解酶双重催化功能的RelA/SpoT合成.本文证明了集胞藻PCC6803(Synechocystis sp.)中唯一编码RelA/SpoT同源蛋白(命名为Syn-RSH)的基因slr1325(syn-rsh)的功能.[方法]通过互补试验证明syn-rsh表达产物的生物学功能;以纤维素薄层层析检测不同条件下Escherichia coli(p)ppGpp合成缺陷突变株及集胞藻PCC6803细胞中的(p)ppGpp.[结果]诱导Syn-RSH表达可使(p)ppGpp合成酶和水解酶基因缺失的E.coli突变株回复野生型表型,并在细胞中积累一定水平的ppGpp;在实验室培养条件下,集胞藻PCC6803细胞中可检测到低水平的ppGpp,氨基酸饥饿可诱导ppGpp水平升高并维持在相应水平.[结论]Syn-RSH具有(p)ppGpp合成酶和水解酶的双重功能,(p)ppGpp是集胞藻PCC6803在实验室生长条件下细胞生长所必需的.

  12. Syn for sagn

    DEFF Research Database (Denmark)

    Nyvang, Caroline

    2013-01-01

    and a representative of the early folkloristic movement, and his engagement in three different photographical projects during the years 1895—1927. Through a study of the actual pictures as well as readings of Olrik’s personal letters, applications for funding, and academic writings, two main arguments for the use...... of photography are identified: one line of argumentation pertains to the potential of photography as a conservatory technology; another series of reasons promotes photographs as a particularly well-suited medium for conveying the past in a holistic way. Furthermore, the article shows how these arguments hinge...

  13. The Early Paleozoic Tiefosi syn-collisional granite in the northern Dabie Orogen:Geochronological and geochemical constraints

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    The Tiefosi granitic pluton is located 5 km northwest of Xinyang City,northern Dabie Orogen,and was emplaced in the Proterozoic Qinling Group. SHRIMP zircon U-Pb dating suggests its crystallization at 436 ± 11 Ma. It is composed of monzogranite and syenogranite containing some amounts of muscovite and few mafic minerals. The rocks are characterized by high and restricted SiO2 content,low FeO,Fe2O3 and MgO contents,high K2O/Na2O ratio,and display high-K calc-alkaline and peraluminous (ACNK>1.1) characteristics. They are generally enriched in large ion lithophile elements (LILE) and depleted in high field strength elements (HFSE). They can be divided into three groups in light of rare earth elements (REE) and trace elements. Group I is moderate in ΣREE and characterized by the absence of Eu anom-aly,high (La/Yb)N ratio,and moderate Rb/Sr and Rb/Ba ratios. Group Ⅱ has moderately negative Eu anomaly,low (La/Yb)N ratio and high ΣREE contents,Rb/Sr and Rb/Ba ratios. Group Ⅲ displays positive Eu anomaly,moderate (La/Yb)N ratio,and low ΣREE,Rb/Sr and Rb/Ba ratios. The calculated εNd(440Ma) values of the rocks vary from 8.8 to 9.9 and Nd depleted mantle model ages are about 2.0 Ga,which resemble those of the paragneisses from the Qinling Group. The results indicate that the Tiefosi granite is crust-derived,syn-collisional S-type granite. Generation of Group I was related to low degree melting of the Qinling Group,while Group Ⅱ was formed by fractionational crystallization of plagioclase from Group I magmas,and Group Ⅲ resulted possibly from magma mingling with plagioclase cumulates. The Tiefosi granite was formed within crustal level related to the collision between the North China and South China blocks in the Early Paleozoic time.

  14. The Early Paleozoic Tiefosi syn-collisional granite in the northern Dabie Orogen: Geochronological and geochemical constraints

    Institute of Scientific and Technical Information of China (English)

    ZHANG JinYang; MA ChangQian; SHE ZhenBing; ZHANG XiangGuo; ZHOU HongSheng

    2007-01-01

    The Tiefosi granitic pluton is located 5 km northwest of Xinyang City, northern Dabie Orogen, and was emplaced in the Proterozoic Qinling Group. SHRIMP zircon U-Pb dating suggests its crystallization at 436±11 Ma. It is composed of monzogranite and syenogranite containing some amounts of muscovite and few mafic minerals. The rocks are characterized by high and restricted SiO2 content, low FeO, Fe2O3and MgO contents, high K2O/Na2O ratio, and display high-K calc-alkaline and peraluminous (ACNK>1.1)characteristics. They are generally enriched in large ion lithophile elements (LILE) and depleted in high field strength elements (HFSE). They can be divided into three groups in light of rare earth elements (REE) and trace elements. Group Ⅰ is moderate in ∑REE and characterized by the absence of Eu anom aly, high (La/Yb)N ratio, and moderate Rb/Sr and Rb/Ba ratios. Group Ⅱ has moderately negative Eu anomaly, low (La/Yb)N ratio and high ∑REE contents, Rb/Sr and Rb/Ba ratios. Group Ⅲ displays positive Eu anomaly, moderate (La/Yb)N ratio, and low ∑REE, Rb/Sr and Rb/Ba ratios. The calculated εNd(440Ma)values of the rocks vary from -8.8 to -9.9 and Nd depleted mantle model ages are about 2.0 Ga, which resemble those of the paragneisses from the Qinling Group. The results indicate that the Tiefosi granite is crust-derived, syn-collisional S-type granite. Generation of Group Ⅰ was related to low degree melting of the Qinling Group, while Group Ⅱ was formed by fractionational crystallization of plagioclase from Group Ⅰ magmas, and Group Ⅲ resulted possibly from magma mingling with plagioclase cumulates.The Tiefosi granite was formed within crustal level related to the collision between the North China and South China blocks in the Early Paleozoic time.

  15. Syn- and Post-Accretionary Structures in the Neoproterozoic Central Allaqi-Heiani Suture Zone, Southeastern Egypt

    Science.gov (United States)

    Abdeen, M. M.; Abdelghaffar, A. A.

    2012-04-01

    The Allaqi-Heiani suture (AHS) is the western part of the main Allaqi-Heiani-Gerf-Onib-Sol Hamed-Yanbu suture and represents one of the Neoproterozoic, arc-arc sutures in the Arabian-Nubian Shield (ANS). It separates the ca. 750 Ma South Eastern Desert terrane in the north from the ca. 830-720 Ma Gabgaba terrane in the south. The AHS is a deformed belt of ophiolitic rocks, syn-tectonic granitoids and metasediments. The central AHS zone is divided into three structural domains. The western domain (Ι) is characterized by NNE low thrusts and SSW-vergent folds. The central domain (ΙΙ) includes upright tight to isoclinal NNW-SSE oriented folds and transpressional faults. The eastern domain (ΙΙΙ) shows NNW-SSE oriented open folds. Structural analysis indicates that the area has a poly-phase deformation history involving at least two events. Event D1 was an N-S to NNE-SSW regional shortening generating the SSW-verging folds and the NNE dipping thrusts. Event D2 was an ENE-WSW shortening producing NNW-SSE oriented folds in the central and eastern parts of the study area and reactivating older thrusts with oblique-slip reverse fault movement. The tectonic evolution of the area involves two episodes of collision: an early collision between the South Eastern Desert terrane and the Gabgaba terrane along the AHS after the consumption of a basin floored by oceanic crust above a north-dipping subduction zone; and a later collision between East- and West-Gondwanas at ca. 750-650 Ma, leading to the closure of the Mozambique Ocean. This collision deformed the AHS along N-S trending shortening zones and produced NW-SE and NE-SW oriented sinistral and dextral transpressional faults, respectively. The early collision episode is related to the terrane accretion during the early Pan-African orogen, while the later phase is related to a late Pan-African or Najd orogen.

  16. The role of partial melting and syn-orogenic deformation in the pre-concentration of uranium and thorium. The example of the CAGE District (Northern Quebec).

    Science.gov (United States)

    Trap, Pierre; Goncalves, Philippe; Durand, Cyril; Marquer, Didier; Feybesse, Jean-Louis; Richard, Yoann; Lacroix, Brice; Caillet, Yoann; Paquette, Jean-Louis

    2015-04-01

    C and δ18O results obtained on calcite and graphite within a marble suggest temperature of 650-770°C for undeformed zones and 470-550°C in mylonitic shear zones. Within some shear zones within paragneiss, the metamorphic assemblages and disappearance of monazite suggest a possible hydrothermal alteration after the circulation of an acidic fluid under subsolidus condition. We propose a metallogenic model for remobilization of U and Th in response of syn-orogenic partial metling and deformation of a continental crust. During peak metamorphism, partial melting is responsible for a passive concentration of monazite in migmatitic paragneiss. Crystallization of anatectic melt released hydro-magmatic fluids that will move along the shear zones toward higher structural levels. These fluids are responsible for dissolution of monazite under sub-solidus conditions. The subsequent U-Th-rich fluids will precipitate U-Th along shear zone, within pegmatites, skarn or marbles. This process may act as strong pre-concentration mechanism process for world-class U-Th deposits.

  17. THE EFFECT OF A NEW SALICYLIC ACID SYNTHESIS COMPOUNDS ADMINISTRATION ON SERUM TRANSAMINASIS

    OpenAIRE

    LETIŢIA STANA

    2013-01-01

    The chemical synthesis product is the amide of chlorine salicylic acid andsulphanilamide (5ClSA-SA). This research had as objective the effect of this productfrom salicylic acid class as a potential medicine on the serum transaminasis activity.5ClSA-SA has been administrated intraperitoneal to Wistar rats for 7 daysconsecutively determining ALT and AST transaminasis activities after 5 and 7 days.Serum transaminases had high values compared to the control sample (220% ASTand 237% ALT).This syn...

  18. Tectono-metamorphic evolution of the internal zone of the Pan-African Lufilian orogenic belt (Zambia): Implications for crustal reworking and syn-orogenic uranium mineralizations

    Science.gov (United States)

    Eglinger, Aurélien; Vanderhaeghe, Olivier; André-Mayer, Anne-Sylvie; Goncalves, Philippe; Zeh, Armin; Durand, Cyril; Deloule, Etienne

    2016-01-01

    The internal zone of the Pan-African Lufilian orogenic belt (Zambia) hosts a dozen uranium occurrences mostly located within kyanite micaschists in a shear zone marking the contact between metasedimentary rocks attributed to the Katanga Neoproterozoic sedimentary sequence and migmatites coring domes developed dominantly at the expense of the pre-Neoproterozoic basement. The P-T-t-d paths reconstructed for these rocks combining field observations, microstructural analysis, metamorphic petrology and thermobarometry and geochronology indicate that they have recorded burial and exhumation during the Pan-African orogeny. Both units of the Katanga metasedimentary sequence and pre-Katanga migmatitic basement have underwent minimum peak P-T conditions of ~ 9-11 kbar and ~ 640-660 °C, dated at ca. 530 Ma by garnet-whole rock Lu-Hf isochrons. This suggests that this entire continental segment has been buried up to a depth of 40-50 km with geothermal gradients of 15-20 °C.km- 1 during the Pan-African orogeny and the formation of the West Gondwana supercontinent. Syn-orogenic exhumation of the partially molten root of the Lufilian belt is attested by isothermal decompression under P-T conditions of ~ 6-8 kbar at ca. 530-500 Ma, witnessing an increase of the geothermal gradients to 25-30 °C·km- 1. Uranium mineralizations that consist of uraninite and brannerite took place at temperatures ranging from ~ 600 to 700 °C, and have been dated at ca. 540-530 Ma by U-Pb ages on uraninite. The main uranium deposition thus occurred at the transition from the syn-orogenic burial to the syn-orogenic exhumation stages and has been then partially transposed and locally remobilized during the post-orogenic exhumation accommodated by activation of low-angle extensional detachment.

  19. Alteration of Polyketide Stereochemistry from anti to syn by a Ketoreductase Domain Exchange in a Type I Modular Polyketide Synthase Subunit.

    Science.gov (United States)

    Eng, Clara H; Yuzawa, Satoshi; Wang, George; Baidoo, Edward E K; Katz, Leonard; Keasling, Jay D

    2016-03-29

    Polyketide natural products have broad applications in medicine. Exploiting the modular nature of polyketide synthases to alter stereospecificity is an attractive strategy for obtaining natural product analogues with altered pharmaceutical properties. We demonstrate that by retaining a dimerization element present in LipPks1+TE, we are able to use a ketoreductase domain exchange to alter α-methyl group stereochemistry with unprecedented retention of activity and simultaneously achieve a novel alteration of polyketide product stereochemistry from anti to syn. The substrate promiscuity of LipPks1+TE further provided a unique opportunity to investigate the substrate dependence of ketoreductase activity in a polyketide synthase module context.

  20. Chemical communication in termites: syn-4,6-dimethylundecan-1-ol as trail-following pheromone, syn-4,6-dimethylundecanal and (5E)-2,6,10-trimethylundeca-5,9-dienal as the respective male and female sex pheromones in Hodotermopsis sjoestedti (Isoptera, Archotermopsidae).

    Science.gov (United States)

    Lacey, Michael J; Sémon, Etienne; Krasulová, Jana; Sillam-Dussès, David; Robert, Alain; Cornette, Richard; Hoskovec, Michal; Záček, Petr; Valterová, Irena; Bordereau, Christian

    2011-12-01

    The trail-following pheromone and sex pheromones were investigated in the Indomalayan termite Hodotermopsis sjoestedti belonging to the new family Archotermopsidae. Gas chromatography coupled to mass spectrometry (GC-MS) after solid phase microextraction (SPME) of the sternal gland secretion of pseudergates and trail-following bioassays demonstrated that the trail-following pheromone of H. sjoestedti was syn-4,6-dimethylundecan-1-ol, a new chemical structure for termite pheromones. GC-MS after SPME of the sternal gland secretion of alates also allowed the identification of sex-specific compounds. In female alates, the major sex-specific compound was identified as (5E)-2,6,10-trimethylundeca-5,9-dienal, a compound previously identified as the female sex pheromone of the termite Zootermopsis nevadensis. In male alates, the major sex-specific compound was identified as syn-4,6-dimethylundecanal, a homolog of syn-4,6-dimethyldodecanal, which has previously been confirmed as the male sex pheromone of Z. nevadensis. The presence of sex-specific compounds in alates of H. sjoestedti strongly suggests for this termite the presence of sex-specific pairing pheromones which were only known until now in Z. nevadensis. Our results showed therefore a close chemical relationship between the pheromones of the taxa Hodotermopsis and Zootermopsis and, in contrast, a clear difference with the taxa Stolotermes and Porotermes, which is in total agreement with the recent creation of the families Archotermopsidae and Stolotermitidae as a substitute for the former family Termopsidae.

  1. N-(4-Methyl-2-nitro-phen-yl)succinamic acid.

    Science.gov (United States)

    Chaithanya, U; Foro, Sabine; Gowda, B Thimme

    2012-03-01

    In the title compound, C(11)H(12)N(2)O(5), the conformation of the N-H bond in the amide segment is syn to the ortho-nitro group in the benzene ring. The amide C=O and the carboxyl C=O of the acid segment are syn to each other and both are anti to the H atoms on the adjacent -CH(2) groups. Furthermore, the C=O and O-H bonds of the acid group are in syn positions with respect to each other. The dihedral angle between the benzene ring and the amide group is 36.1 (1)°. The amide H atom shows bifurcated intra-molecular hydrogen bonding with an O atom of the ortho-nitro group and an inter-molecular hydrogen bond with the carbonyl O atom of another mol-ecule. In the crystal, the N-H⋯O(C) hydrogen bonds generate a chain running along the [100] direction. Inversion dimers are formed via a pair of O-H⋯O(C) interactions, that form an eight-membered hydrogen-bonded ring involving the carboxyl group.

  2. SynPAnal: software for rapid quantification of the density and intensity of protein puncta from fluorescence microscopy images of neurons.

    Directory of Open Access Journals (Sweden)

    Eric Danielson

    Full Text Available Continuous modification of the protein composition at synapses is a driving force for the plastic changes of synaptic strength, and provides the fundamental molecular mechanism of synaptic plasticity and information storage in the brain. Studying synaptic protein turnover is not only important for understanding learning and memory, but also has direct implication for understanding pathological conditions like aging, neurodegenerative diseases, and psychiatric disorders. Proteins involved in synaptic transmission and synaptic plasticity are typically concentrated at synapses of neurons and thus appear as puncta (clusters in immunofluorescence microscopy images. Quantitative measurement of the changes in puncta density, intensity, and sizes of specific proteins provide valuable information on their function in synaptic transmission, circuit development, synaptic plasticity, and synaptopathy. Unfortunately, puncta quantification is very labor intensive and time consuming. In this article, we describe a software tool designed for the rapid semi-automatic detection and quantification of synaptic protein puncta from 2D immunofluorescence images generated by confocal laser scanning microscopy. The software, dubbed as SynPAnal (for Synaptic Puncta Analysis, streamlines data quantification for puncta density and average intensity, thereby increases data analysis throughput compared to a manual method. SynPAnal is stand-alone software written using the JAVA programming language, and thus is portable and platform-free.

  3. Forceful Emplacement of Granitic Plutons in an Extensional Tectonic Setting: Syn-kinematic Plutons in the Yagan-Onch Hayrhan Metamorphic Core Complex

    Institute of Scientific and Technical Information of China (English)

    王涛; 郑亚东; 李天兵; 高永军; 马铭波

    2002-01-01

    It is generally considered that granitic plutons are forcefully emplaced in a compressional setting and permissively emplaced in an extensional setting. This paper, however, shows that syn-kinematic (extensional) elliptic granitic plutons in the Yagan-Onch Hayrhan metamorphic core complex (MCC) have relatively strong forceful emplacement, which are indicated by (1) concentric distribution of the rock units, (2) a strain pattern with strong strains on the margins and low strains at the centre of a pluton, and particularly (3) syn-emplacement shortening of the host rocks within the aureole. The strain analysis for the host rocks shows that the host-rock ductile shortening, I.e. Forceful emplacement, provides about 16?24% of the emplacement space for the present plutons. All these suggest that forceful emplacement occurs not only in a compressional tectonic setting, but also in an extensional setting. This study further demonstrates the significance of the multiple emplacement of granitic plutons and provides new information about the causality between granitic magmatism and the formation of the MCC and its dynamics.

  4. Fluid systems and fracture development during syn-depositional fold growth: An example from the Pico del Aguila anticline, Sierras Exteriores, southern Pyrenees, Spain

    Science.gov (United States)

    Beaudoin, Nicolas; Huyghe, Damien; Bellahsen, Nicolas; Lacombe, Olivier; Emmanuel, Laurent; Mouthereau, Frédéric; Ouanhnon, Laure

    2015-01-01

    This paper reports an integrated, spatio-temporal analysis of the fracture-controlled paleo-fluid system in the Pico del Aguila anticline, a N-S trending fold located in the Sierras Exteriores, the southern front of the Spanish Pyrenees. Eight fracture sets (joints or faults) are recognized throughout the fold and are separated into a fracture sequence that is defined using field relationships and the remarkable temporal constraints offered by the syn-tectonic sedimentary deposits. This fracture sequence records a complex Paleocene to Early Oligocene structural evolution, including map-view, clockwise rotation and tilting of the fold axis. The geochemical analysis of calcite cements from the different mineralized fracture/vein sets reveals a compartmentalized fluid system during most of fold development. This initial paleofluid system was later perturbed when bending-related fractures associated with foreland flexure and outer arc extension triggered small-scale, vertical fluid migration. Fractures developed in shallow strata facilitated downward migration of surficial fluids that controlled the paleo-fluid system in the Late Priabonian/Stampian continental deposits. The study of the Pico del Aguila anticline depicts for the first time the evolution of a fluid system in a shallow, syn-depositional compressional setting, and results further strengthen the statement that fluids migrate vertically across stratigraphic boundaries take place during fold hinge-related deformation.

  5. U Pb dating of the end of the Pan-African orogeny in the Tuareg shield: the post-collisional syn-shear Tioueine pluton (Western Hoggar, Algeria)

    Science.gov (United States)

    Paquette, J. L.; Caby, R.; Djouadi, M. T.; Bouchez, J. L.

    1998-12-01

    The Tioueine pluton intrudes the Neoproterozoic series of the Iskel terrane, located in the Tuareg shield, western Hoggar. The consistency of the internal structures as well as the nature and organization of the associated microstructures demonstrate that the Tioueine pluton was emplaced syn-kinematically while N-S strike-slip shear zones were active. The syn-tectonic emplacement of the Tioueine massif implies that this pluton, although belatedly crystallized, entirely belongs to the concept of post-collisional magmatism. In order to date precisely the late Pan-African tectono-metamorphic event in the studied area, an U-Pb age of 523±1 Ma was obtained from abraded zircons of a late quartz-syenite from the Tioueine pluton. This early Cambrian age is younger than the other plutons of the Tuareg shield, which were mainly emplaced between 630 Ma and 580 Ma. This dating also shows that the Tuareg shield was not a single coherent block at 525 Ma, but rather an amalgam of active terranes moving each other along major shear zones. Finally, the Tioueine massif represents probably the final welding of the Tuareg shield assembly of terranes and consequently the end of the post-collisional orogenic episode in the whole Pan-African belt.

  6. Versatile Self-Adapting Boronic Acids for H-Bond Recognition: From Discrete to Polymeric Supramolecules.

    Science.gov (United States)

    Georgiou, Irene; Kervyn, Simon; Rossignon, Alexandre; De Leo, Federica; Wouters, Johan; Bruylants, Gilles; Bonifazi, Davide

    2017-02-22

    Because of the peculiar dynamic covalent reactivity of boronic acids to form tetraboronate derivatives, interest in using their aryl derivatives in materials science and supramolecular chemistry has risen. Nevertheless, their ability to form H-bonded complexes has been only marginally touched. Herein we report the first solution and solid-state binding studies of the first double-H-bonded DD·AA-type complexes of a series of aromatic boronic acids that adopt a syn-syn conformation with suitable complementary H-bonding acceptor partners. The first determination of the association constant (Ka) of ortho-substituted boronic acids in solution showed that Ka for 1:1 association is in the range between 300 and 6900 M(-1). Crystallization of dimeric 1:1 and trimeric 1:2 and 2:1 complexes enabled an in-depth examination of these complexes in the solid state, proving the selection of the -B(OH)2 syn-syn conformer through a pair of frontal H-bonds with the relevant AA partner. Non-ortho-substituted boronic acids result in "flat" complexes. On the other hand, sterically demanding analogues bearing ortho substituents strive to retain their recognition properties by rotation of the ArB(OH)2 moiety, forming "T-shaped" complexes. Solid-state studies of a diboronic acid and a tetraazanaphthacene provided for the first time the formation of a supramolecular H-bonded polymeric ribbon. On the basis of the conformational dynamicity of the -B(OH)2 functional group, it is expected that these findings will also open new possibilities in metal-free catalysis or organic crystal engineering, where double-H-bonding donor boronic acids could act as suitable organocatalysts or templates for the development of functional materials with tailored organizational properties.

  7. Conditional transgenic mice expressing C-terminally truncated human α-synuclein (αSyn119 exhibit reduced striatal dopamine without loss of nigrostriatal pathway dopaminergic neurons

    Directory of Open Access Journals (Sweden)

    Flint Beal M

    2009-07-01

    Full Text Available Abstract Background Missense mutations and multiplications of the α-synuclein gene cause autosomal dominant familial Parkinson's disease (PD. α-Synuclein protein is also a major component of Lewy bodies, the hallmark pathological inclusions of PD. Therefore, α-synuclein plays an important role in the pathogenesis of familial and sporadic PD. To model α-synuclein-linked disease in vivo, transgenic mouse models have been developed that express wild-type or mutant human α-synuclein from a variety of neuronal-selective heterologous promoter elements. These models exhibit a variety of behavioral and neuropathological features resembling some aspects of PD. However, an important deficiency of these models is the observed lack of robust or progressive nigrostriatal dopaminergic neuronal degeneration that is characteristic of PD. Results We have developed conditional α-synuclein transgenic mice that can express A53T, E46K or C-terminally truncated (1–119 human α-synuclein pathological variants from the endogenous murine ROSA26 promoter in a Cre recombinase-dependent manner. Using these mice, we have evaluated the expression of these α-synuclein variants on the integrity and viability of nigral dopaminergic neurons with age. Expression of A53T α-synuclein or truncated αSyn119 selectively in nigrostriatal pathway dopaminergic neurons for up to 12 months fails to precipitate dopaminergic neuronal loss in these mice. However, αSyn119 expression in nigral dopaminergic neurons for up to 12 months causes a marked reduction in the levels of striatal dopamine and its metabolites together with other subtle neurochemical alterations. Conclusion We have developed and evaluated novel conditional α-synuclein transgenic mice with transgene expression directed selectively to nigrostriatal dopaminergic neurons as a potential new mouse model of PD. Our data support the pathophysiological relevance of C-terminally truncated α-synuclein species in vivo. The

  8. Ungdomar, mat och träning: En studie om ungdomars medvetenhet, kunskap och syn på kost och näring

    OpenAIRE

    Moberg, Kajsa; Lindskog, Emma

    2016-01-01

    Idrott är en populär aktivitet bland Sveriges ungdomar. Eftersom det under tonåren krävs extra mycket energi och näring har många ungdomar svårt att få i sig tillräckliga mängder, och en orsak är okunskap bland de tränande individerna. Syftet var att undersöka idrottande ungdomars syn på mat och måltider, medvetenheten om kostens betydelse för prestationen och vilka informationskällor ungdomarna använder samt kunskapsnivån i grundläggande kost- och näringslära. Studien genomfördes genom en we...

  9. SynQor的52.5V半砖型DC/DC转换器适用于局域网供电

    Institute of Scientific and Technical Information of China (English)

    2005-01-01

    SYnQor公司日前宣布推出一款单输出隔离式DC/DC转换器。该产品适于通过局域网、IP电话和隔离式总线电压供电应用。这款标准半砖型模块属于PowerQor Tera系列.它的输出电压为525V.输出功率为200W.是一款采用同步整流和专利布局技术的开放式架结构转换器,满负载效率可达92%.散热性能好。

  10. Property study of poly nitro compounds of cis-syn-cis-2, 6-dioxodecahydro-lH, 5H-diimidazo [4, 5-b: 4', 5'-e] pyrazine

    Science.gov (United States)

    Liu, Yang; Xu, Zhibin; Xu, Yudong; Xu, Liang; Meng, Zihui

    2017-03-01

    Poly nitro group substituted cis-syn-cis-2, 6-dioxodecahydro-lH, 5H-diimidazo [4, 5-b: 4', 5'-e] pyrazine derivatives are synthesized by modified method and adequately characterized. All compounds have good performance both in density (ρ> 1.85 g/cm3) and high detonation velocity (vD > 8800 m/s, calculated). Some representative compounds, for example, 4 (vD: 9405 ms-1; P: 41.6 GPa) and 5 (vD:9781 ms-1; P: 45.6 GPa) exhibit excellent detonation performances, which are comparable with current energetic compounds such as RDX (vD: 8724 ms-1; P: 35.2 GPa) and HMX (vD:9059 ms-1; P: 39.2 GPa). Considering the sensitivity increasing with the number of nitro group, two componds with tetranitro groups (2 and 3) are worthy of deep research.

  11. 3-D ore body modeling and structural settings of syn-to late orogenic Variscan hydrothermal mineralization, Siegerland district, Rhenish Massif, NW Germany

    Science.gov (United States)

    Peters, Meike; Hellmann, André; Meyer, Franz Michael

    2013-04-01

    The Siegerland district is located in the fold-and thrust-belt of the Rhenish Massif and hosts diverse syn-to late orogenic mineralization styles. Peak-metamorphism and deformation occurred at 312-316±10 Ma (Ahrendt et al., 1978) at temperature-pressure conditions of 280-320°C and 0.7-1.4 kbar (Hein, 1993). In addition to syn-orogenic siderite-quartz mineralization at least four different syn-to late orogenic mineralization stages are identified comprising Co-Ni-Cu-Au, Pb-Zn-Cu, Sb-Au, and hematite-digenite-bornite ores (Hellmann et al., 2012). The earliest type of syn-orogenic ore mineralization is formed by siderite-quartz veins, trending N-S, E-W and NE-SW. The vein systems are closely related to fold and reverse fault geometries (Hellmann et al., 2012). The most important structural feature is the first-order Siegen main reverse fault showing an offset into three major faults (Peters et al., 2012). The structural control on ore formation is demonstrated by the Co-Ni-Cu-Au mineralization generally hosted by NE-ENE trending reverse faults and associated imbrication zones that have reactivated the older siderite-quartz veins. In this study, we developed a 3-D model of the Alte Buntekuh ore bodies in the Siegerland district, using Datamine Studio3 to investigate the structural setting of Co-Ni-Cu-Au mineralization. The salient structural and spatial data for the 3-D model were taken from old mine level plans as well as from geological and topographical maps. The ore bodies are located immediately in the hanging wall of the southern branch of the Siegen main reverse fault (Peters et al., 2012). From the model it becomes obvious, that the earlier siderite-quartz veins, dipping steeply to the NW, are cross-cut and segmented by oppositely dipping oblique reverse faults. Individual ore body segments are rotated and displaced, showing a plunge direction to the SW. The 3-D model further reveals the presence of hook-like, folded vein arrays, highly enriched in cobalt

  12. A double chain reversal loop and two diagonal loops define the architecture of a unimolecular DNA quadruplex containing a pair of stacked G(syn)-G(syn)-G(anti)-G(anti) tetrads flanked by a G-(T-T) Triad and a T-T-T triple.

    Science.gov (United States)

    Kuryavyi, V; Majumdar, A; Shallop, A; Chernichenko, N; Skripkin, E; Jones, R; Patel, D J

    2001-06-29

    The architecture of G-G-G-G tetrad-aligned DNA quadruplexes in monovalent cation solution is dependent on the directionality of the four strands, which in turn are defined by loop connectivities and the guanine syn/anti distribution along individual strands and within individual G-G-G-G tetrads. The smallest unimolecular G-quadruplex belongs to the d(G2NnG2NnG2NnG2) family, which has the potential to form two stacked G-tetrads linked by Nn loop connectivities. Previous studies have focused on the thrombin-binding DNA aptamer d(G2T2G2TGTG2T2G2), where Nn was T2 for the first and third connecting loops and TGT for the middle connecting loop. This DNA aptamer in K(+) cation solution forms a unimolecular G-quadruplex stabilized by two stacked G(syn)-G(anti)-G(syn)-G(anti) tetrads, adjacent strands which are antiparallel to each other and edge-wise connecting T2, TGT and T2 loops. We now report on the NMR-based solution structure of the d(G2T4G2CAG2GT4G2T) sequence, which differs from the thrombin-binding DNA aptamer sequence in having longer first (T4) and third (GT4) loops and a shorter (CA) middle loop. This d(G2T4G2CAG2GT4G2T) sequence in Na(+) cation solution forms a unimolecular G-quadruplex stabilized by two stacked G(syn)-G(syn)-G(anti)-G(anti) tetrads, adjacent strands which have one parallel and one antiparallel neighbors and distinct non-edge-wise loop connectivities. Specifically, the longer first (T4) and third (GT4) loops are of the diagonal type while the shorter middle loop is of the double chain reversal type. In addition, the pair of stacked G-G-G-G tetrads are flanked on one side by a G-(T-T) triad and on the other side by a T-T-T triple. The distinct differences in strand directionalities, loop connectivities and syn/anti distribution within G-G-G-G tetrads between the thrombin-binding DNA aptamer d(G2T2G2TGTG2T2G2) quadruplex reported previously, and the d(G2T4G2CAG2GT4G2T) quadruplex reported here, reinforces the polymorphic nature of higher

  13. Time span of plutonism, fabric development, and cooling in a Neoproterozoic magmatic arc segment: U Pb age constraints from syn-tectonic plutons, Sark, Channel Islands, UK

    Science.gov (United States)

    Miller, Brent V.; Samson, Scott D.; D'Lemos, Richard S.

    1999-10-01

    New U-Pb zircon and titanite dates from syn-tectonic plutons on the British Channel Island of Sark constrain the time span of plutonism, fabric development, and cooling in this part of the Neoproterozoic Cadomian magmatic arc. The Tintageu leucogneiss is a mylonitic unit that was dated previously at 615.6 +4.2-2.3 Ma. The Port du Moulin quartz diorite, which intruded the Tintageu unit, contains a high-strain solid-state deformation fabric that is less intense than, but parallel to, fabrics in the leucogneiss and yields a U-Pb zircon date of 613.5 +2.3-1.5 Ma. The Little Sark quartz diorite also displays solid-state deformation fabrics in addition to relict magmatic textures, and yields a U-Pb zircon date of 611.4 +2.1-1.3 Ma. The North Sark granodiorite is largely penetratively undeformed, exhibits mainly magmatic fabrics and textures and has a U-Pb zircon date of 608.7 +1.1-1.0 Ma. Two fractions of titanite from each intrusion are essentially concordant and are identical within error, with mean dates of 606.5±0.4 Ma (Port du Moulin quartz diorite), 606.2±0.6 Ma (Little Sark quartz diorite), 606.4±0.6 Ma (North Sark granodiorite). The new U-Pb data, in combination with previous U-Pb and 40Ar/ 39Ar data and previous field studies, confirm the syn-tectonic nature of the Sark plutons and quantify the time span (ca. 7 m.y.) required for intrusion and sufficient crystallization of each body to record incremental strain during waning deformation. Titanite U-Pb and hornblende 40Ar/ 39Ar dates mark final cooling about 2 m.y. after intrusion of the last pluton.

  14. Thermolytic Behavior of 4-Fold Bridged syn-Tricyclo[4.2.0.0(2,5)]octa-3,7-dienes.

    Science.gov (United States)

    Brand, Stefan; Gleiter, Rolf

    1997-06-27

    The syntheses of the 4-fold-bridged compounds syn-1,2,3,4,5,6,7,8,9,10,11,12-dodecahydro-8b,12b-butanobenzo[3',4']cyclobuta[1',2':3,4]cyclobuta[1,2-e]biphenylene (7), syn-1,4,5,8,9,12-hexahydro-8b,12b-(but-3-eno)benzo[3',4']cyclobuta[1',2':3,4]cyclobuta[1,2-e]biphenylene (8), and 2,3,4,5,6,7,8,9,10,11,12,13,14,15-tetradecahydro-10b,15b-pentano-1H-cyclobuta[1",2":2,3;3",4":3',4']dicyclobuta[1,2:3,4:1',2']triscycloheptene (9) have been achieved starting from the cyclic diynes 10-12. Heating 7 and 8 at 200 degrees C without solvent leads to 1,2,3,4,5,6,7,8,9,10,11,12-dodecahydro-8b,12b-butanobenzo[3,4]cyclobuta[1,2-l]phenanthrene (18) and 1,4,5,8,9,12-hexahydro-8b,12b-(but-3-eno)benzo[3,4]cyclobuta[1,2-l]phenanthrene (19). Both systems contain a bridged bicyclo[4.2.0]octa-2,4,7-triene skeleton. The thermolysis of 9 yields (Delta(5a,5b;10a,11;11a,16a;17,17a))-2,3,4,5,6,7,8,9,10,12,13,14,15,16-tetradecahydro-11,17-pentano-1H-triscyclohepta[a,c,f]cyclooctene (20), a 4-fold-bridged cyclooctatetraene derivative. Treatment of 8 with DDQ leads to the dehydrogenation products 21 and 22. The different behavior in the thermolysis of 7 and 8 as compared to 9 is ascribed to the different lengths of the bridges.

  15. Hybrid macrocycle formation and spiro annulation on cis-syn-cis-tricyclo[6.3.0.02,6]undeca-3,11-dione and its congeners via ring-closing metathesis

    Directory of Open Access Journals (Sweden)

    Sambasivarao Kotha

    2015-07-01

    Full Text Available We have developed a simple methodology to transform cis-syn-cis-triquinane derivative 2 into the diindole based macrocycle 6 involving Fischer indolization and ring-closing metathesis (RCM. Various spiro-polyquinane derivatives have been assembled via RCM as a key step.

  16. Construction and expression of nucleic acid vaccine pVAXl-h-alpha S1-14o coding human alpha-synuclein

    Institute of Scientific and Technical Information of China (English)

    Jiacai Wang; Yingsong Ouyang; Shaojun Wang; Guoguang Peng; Qin Luo; Side Jiang; Faxiang Wang

    2008-01-01

    BACKGROUND: The deposition of α-synuclein (α-syn) aggregates is a neuropathological feature of Parkinson's disease. It remains impossible to involve α-syn aggregation in the treatment of Parkinson's disease. A nucleic acid vaccine will provide a new pathway to immunotherapy for Parkinson's disease.OBJECTIVE: To construct a recombinant eukaryotic expression vector pVAX1 coding human α-syn and to observe its expression level in COS-7 cells.DESIGN AND SETTING: The present bioengineering and molecular biology experiment was performed at Department of Neurology, First Affiliated Hospital of Chongqing Medical University & Chongqing Key Laboratory of Neurology.MATERIALS: The eukaryotic expression plasmid pVAX1, human embryonic brain tissue, healthy human blood cells, and COS-7 cells were purchased from Promega Company, USA.METHODS: The full-length CDS sequence of the human α-syn gene was amplified by RT-PCR, which contained restriction sites for the enzymes Kpn I, Xba I and Kozak consensus sequence. Then the PCR products and eukaryotic expression vector pVAX1 were digested with Kpn I and Xba I simultaneously, and were extracted and ligated by T4 ligase. The recombinant constructs pVAXI-hα-S1-14o were transformed into competent E. coli TOP 10 cells and the positive clones were screened and selected using PCR analysis,restriction digestion analysis, and DNA sequencing. The constructs were then tested for protein expression in COS-7 cells by RT-PCR and Western blotting.MAIN OUTCOME MEASURES: Identification of an eukaryotic expression vector containing the human α-syn gene, pVAX1-hα-S1-140, and detection of the expression in mammalian cell COS-7.RESULTS: The pVAXi vector was successfully cloned with human a -syn in the correct orientation and in-frame. The DNA vaccine constructs pVAX1-hα-S1-140 with the human α-syn gene were shown to be expressed in COS-7 cells. Human α-syn was successfully expressed in the mammalian cell line and was detected by RT-PCR and western

  17. Phosphorylation of synaptic GTPase-activating protein (synGAP) by Ca2+/calmodulin-dependent protein kinase II (CaMKII) and cyclin-dependent kinase 5 (CDK5) alters the ratio of its GAP activity toward Ras and Rap GTPases.

    Science.gov (United States)

    Walkup, Ward G; Washburn, Lorraine; Sweredoski, Michael J; Carlisle, Holly J; Graham, Robert L; Hess, Sonja; Kennedy, Mary B

    2015-02-20

    synGAP is a neuron-specific Ras and Rap GTPase-activating protein (GAP) found in high concentrations in the postsynaptic density (PSD) fraction from the mammalian forebrain. We have previously shown that, in situ in the PSD fraction or in recombinant form in Sf9 cell membranes, synGAP is phosphorylated by Ca(2+)/calmodulin-dependent protein kinase II (CaMKII), another prominent component of the PSD. Here, we show that recombinant synGAP (r-synGAP), lacking 102 residues at the N terminus, can be purified in soluble form and is phosphorylated by cyclin-dependent kinase 5 (CDK5) as well as by CaMKII. Phosphorylation of r-synGAP by CaMKII increases its HRas GAP activity by 25% and its Rap1 GAP activity by 76%. Conversely, phosphorylation by CDK5 increases r-synGAP's HRas GAP activity by 98% and its Rap1 GAP activity by 20%. Thus, phosphorylation by both kinases increases synGAP activity; CaMKII shifts the relative GAP activity toward inactivation of Rap1, and CDK5 shifts the relative activity toward inactivation of HRas. GAP activity toward Rap2 is not altered by phosphorylation by either kinase. CDK5 phosphorylates synGAP primarily at two sites, Ser-773 and Ser-802. Phosphorylation at Ser-773 inhibits r-synGAP activity, and phosphorylation at Ser-802 increases it. However, the net effect of concurrent phosphorylation of both sites, Ser-773 and Ser-802, is an increase in GAP activity. synGAP is phosphorylated at Ser-773 and Ser-802 in the PSD fraction, and its phosphorylation by CDK5 and CaMKII is differentially regulated by activation of NMDA-type glutamate receptors in cultured neurons. © 2015 by The American Society for Biochemistry and Molecular Biology, Inc.

  18. Nucleophilic Additions of 2-Furyllithium to Carbonyl Derivatives of L-Serine. Formal Synthesis of (2R,3R-β-Hydroxy Aspartic Acid

    Directory of Open Access Journals (Sweden)

    T. Tejero

    1998-01-01

    Full Text Available The nucleophilic addition of 2-furyllithium to esters derived from L-serine is described. The obtained furyl ketone 5 is stereoselectively reduced (ds≥95% with sodium borohydride to afford the corresponding syn aminoalcohol 12 in enantiomerically pure form. Compound 12 was further converted into valuable α-hydroxy-β-amino acids by means of the furan-to-acid equivalence.

  19. A simple medium modification for isolation, growth and enumeration of Acidithiobacillus thiooxidans (syn. Thiobacillus thiooxidans) from water samples.

    Science.gov (United States)

    Starosvetsky, Janeta; Zukerman, Udy; Armon, Robert H

    2013-02-15

    High concentrations of H(2)S in groundwater are commonly removed using Biological Trickling Filter (BTF) that contains high numbers of biofilm immobilized sulfur oxidizing bacteria (mainly Thiobacillus thiooxidans). BTF performance requires continuous monitoring of these bacteria at several sampling points. The Most Probable Number (MPN) technique is at the moment the method of choice to enumerate viable T. thiooxidan cells under the above conditions. However, this method is extremely time-consuming (7-10days) and not always suitable for environmental monitoring. In the present study, Thiobacillus agar recommended for isolation and cultivation of Thiobacillus species by Spread plate method was modified by addition of bromocresol green (BCG) in order obtain a clear-cut resolution of the growing colonies resulting in similar or higher numbers compared to other methods. Visual emergence of bacterial colonies on the 3rd and 4th days, from the initial plating, was associated with sulfuric acid production, resulting in an unambiguous color change from blue to yellow, around each colony. This study revealed that BCG modified Thiobacillus agar is substantially time saving and much easier to infer compared to MPN technique.

  20. Syn- and post-eruptive erosion, gully formation, and morphological evolution of a tephra ring in tropical climate erupted in 1913 in West Ambrym, Vanuatu

    Science.gov (United States)

    Németh, Károly; Cronin, Shane J.

    2007-04-01

    Syn- and post-eruptive erosion of volcanic cones plays an important role in mass redistribution of tephra over short periods. Descriptions of the early stages of erosion of tephra from monogenetic volcanic cones are rare, particularly those with a well-constrained timing of events. In spite of this lack of data, cone morphologies and erosion features are commonly used for long-term erosion-rate calculations and relative age determinations in volcanic fields. This paper offers new observations which suggest differing constraints on the timing of erosion of a tephra ring may be operating than those conventionally cited. In 1913 a tephra ring was formed as part of an eruption in west Ambrym Island, Vanuatu and is now exposed along a continuous 2.5 km long coastal section. The ring surrounds an oval shaped depression filled by water. It is composed of a succession of a phreatomagmatic fall and base-surge beds, interbedded with thin scoriaceous lapilli units. Toward the outer edges of the ring, base-surge beds are gradually replaced in the succession by fine ash-dominated debris flows and hyperconcentrated flow deposits. The inter-fingering of phreatomagmatic deposits with syn-volcanic reworked volcaniclastic sediments indicates that an ongoing remobilisation of freshly deposited tephra was already occurring during the eruption. Gullies cut into the un-weathered tephra are up to 4 m deep and commonly have c. 1 m of debris flow deposit fill in their bases. There is no indication of weathering, vegetation fragments or soil development between the gully bases and the basal debris flow fills. Gully walls are steep and superficial fans of collapsed sediment are common. Most gullies are heavily vegetated although some active (ephemeral) channels occur. These observations suggest that the majority of the erosion of such tephra rings in tropical climates takes place directly during eruption and possibly for only a period of days to weeks afterward. After establishment of the

  1. Genesis and evolution of a syn-orogenic basin in transpression: Insights from petrography, geochemistry and Sm Nd systematics in the Variscan Pedroches basin (Mississippian, SW Iberia)

    Science.gov (United States)

    Armendáriz, Maider; López-Guijarro, Rafael; Quesada, Cecilio; Pin, Christian; Bellido, Félix

    2008-12-01

    The Pedroches basin is an outstanding syn-orogenic Variscan (Mississippian) depocenter, located in the vicinity of, and overstepping onto the Neoproterozoic (Cadomian) suture between the Ossa Morena and Central Iberian zones of the SW Iberian Massif. Its formation appears to be related to transtensional processes at a major releasing bend in the reactivated suture during sinistral escape of the Ossa Morena Zone from the zone of frontal Variscan collision between northern Gondwana and Laurussia. Subsequent basin inversion resulted in compartmentalization and internal deformation, and was probably related to transpression at a restraining bend along the reactivated suture (Badajoz-Córdoba shear zone). Basin fill consists of both igneous and metasedimentary rocks generally deposited in a shallow marine, storm-dominated platform environment. By using new petrographic, geochemical and Sm-Nd isotopic data, we attempt to characterize: 1) the sources and geological evolution of the Pedroches basin fill, and 2) the processes involved in basin development and sediment supply and dispersal. Sampling was carried out in both sedimentary and igneous rocks belonging to three major structural units within the central part of the basin: Guadiato unit, Guadalbarbo unit and South Pedroches Valley unit. The combined Nd isotopic and geochemical data from the Pedroches Mississippian metasedimentary rocks indicate an upper continental crust provenance and a high degree of sedimentary recycling of these materials throughout the basin; i.e., they are derived from old, recycled upper crust without any significant juvenile component despite the presence of interbedded basaltic rocks. The igneous rocks in turn correspond to submarine basalts and trachy-andesitic basalts plus some hybrid rocks including crust-derived components. Concerning the mafic rocks, major element compositions reveal a tholeiitic and transitional tholeiitic character for the Guadalbarbo unit rocks (MORB type) and an

  2. The high-resolution crystal structure of a parallel intermolecular DNA G-4 quadruplex/drug complex employing syn glycosyl linkages

    Science.gov (United States)

    Clark, George R.; Pytel, Patrycja D.; Squire, Christopher J.

    2012-01-01

    We have determined the X-ray structure of the complex between the DNA quadruplex d(5′-GGGG-3′)4 and daunomycin, as a potential model for studying drug–telomere interactions. The structure was solved at 1.08 Å by direct methods in space group I4. The asymmetric unit comprises a linear arrangement of one d(GGGG) strand, four daunomycin molecules, a second d(GGGG) strand facing in the opposite direction to the first, and Na and Mg cations. The crystallographic 4-fold axis generates the biological unit, which is a 12-layered structure comprising two sets of four guanine layers, with four layers each of four daunomycins stacked between the 5′ faces of the two quadruplexes. The daunomycin layers fall into two groups which are novel in their mode of self assembly. The only contacts between daunomycin molecules within any one of these layers are van der Waals interactions, however there is substantial π–π stacking between successive daunomycin layers and also with adjacent guanine layers. The structure differs significantly from all other parallel d(TGGGGT)4 quadruplexes in that the 5′ guanine adopts the unusual syn glycosyl linkage, refuting the widespread belief that such conformations should all be anti. In contrast to the related d(TGGGGT)/daunomycin complex, there are no ligand–quadruplex groove insertion interactions. PMID:22373921

  3. Tectonic controls on the quality and distribution of Syn- to Post-Rift reservoir sands in the Southern Red Sea, offshore Western Yemen

    Energy Technology Data Exchange (ETDEWEB)

    Carter, J.M.L. [Petroleum Geologists Group Ltd., Reading (United Kingdom)

    1995-08-01

    Previous geophysical and drilling results in the southern Red Sea, and the presence of numerous oil seeps, indicate that the syn- to post-rift section is prospective for oil and gas. The relatively high geothermal gradient offshore western Yemen makes intra-salt and post-salt reservoir sands the only viable exploration targets. The quality and distribution of the reservoir sands remains one of the main unknown risk factors, An improved understanding of the controls on deposition of these sands is achieved by use of LandSat data, which provide evidence of a regional tectonic framework involving NE/SW-trending oceanic transform faults which are expressed onshore as strike-slip features, in some cases representing reactivated Precambrian lineaments. These faults are thought to have played two fundamental roles in the Neogene to Recent evolution of the southern Red Sea - firstly by directing clastic input from the rising Yemen Highlands into offshore depocentres, and secondly by influencing the location of salt diapirs sourced by Upper Miocene evaporates. By considering these factors, together with the pattern of heat flow from the developing oceanic rift of the southern Red Sea, it is possible to delineate areas of offshore western Yemen where reservoir characteristics are likely to be most favourable.

  4. The textural record of conduit and syn-eruptive degassing preserved in ballistic bombs from cyclic Vulcanian explosions of Galeras volcano, Colombia

    Science.gov (United States)

    Bain, A. A.

    2015-12-01

    Volcanic bombs preserve textural data that record conduit conditions as well as syn-eruptive processes that acted upon a parcel of magma following decompression. Specifically, these pyroclasts may record several episodes of crystal and bubble growth, as well as bubble coalescence and collapse. Furthermore, bombs retrieved from sequential eruptions provide valuable insight into the unobservable evolution of a volcanic conduit over time. We present results from a morphological and textural study of vesicle size distributions in ballistic bombs from six Vulcanian eruptions from the 2004-2012 period of activity of Galeras volcano, Colombia. These violent eruptions cyclically destroyed and ejected a stalled, degassed and crystal-rich plug and a limited amount of underlying magma. They were followed by resumption of the slow rise of magma in the shallow conduit, accompanied by redevelopment of a plug and the perpetuation of a hazardous cycle. We find that bombs from these eruptions fall into three morphological classes including dense bombs, breadcrusted bombs and vesicular bombs based on the existence or absence of a primary quenched rind and comparison of the interior and exterior vesicularities. We study vesicle populations using image analysis of SEM images followed by stereological conversion to reconstruct the degassing history of each pyroclast. The results of this study will be used to produce a quantitative model of the evolution of porosity, permeability and degassing in the upper conduit of Galeras volcano during the 2004-2012 eruptive episode.

  5. A study of the distribution, structure and seismic stratigraphy of syn-breakup and post-breakup sediments in the Faroe sector of the Faroe-Shetland Basin

    DEFF Research Database (Denmark)

    Olavsdottir, Jana

    Emplacement of the Cenozoic sediments in the Faroese sector of the Faroe-Shetland Basin appear to be controlled by decelerating thermal subsidence of the basin, and local uplift of sediment source areas. However, the actual distribution of sediments appears to be controlled by re-activation of ol......Emplacement of the Cenozoic sediments in the Faroese sector of the Faroe-Shetland Basin appear to be controlled by decelerating thermal subsidence of the basin, and local uplift of sediment source areas. However, the actual distribution of sediments appears to be controlled by re...... is a potential tool understanding deviations from “normal” thermal subsidence and for predicting the prospectivity in syn- and post-rift succession in the Faroe-Shetland Basin. On top of the basalt in the Faroe-Shetland Basin there is deposited up to 3.5 km thick sedimentary package, which led into the basin...... from different directions. With interpretations of 2-D and 3-D reflection seismic data of the post-basalt package it is shown which adjacent areas the various sub-sedimentary packages comes from and where they are located in the basin at specific time intervals. The adjacent areas to the Faroe-Shetland...

  6. The high-resolution crystal structure of a parallel intermolecular DNA G-4 quadruplex/drug complex employing syn glycosyl linkages.

    Science.gov (United States)

    Clark, George R; Pytel, Patrycja D; Squire, Christopher J

    2012-07-01

    We have determined the X-ray structure of the complex between the DNA quadruplex d(5'-GGGG-3')(4) and daunomycin, as a potential model for studying drug-telomere interactions. The structure was solved at 1.08 Å by direct methods in space group I4. The asymmetric unit comprises a linear arrangement of one d(GGGG) strand, four daunomycin molecules, a second d(GGGG) strand facing in the opposite direction to the first, and Na and Mg cations. The crystallographic 4-fold axis generates the biological unit, which is a 12-layered structure comprising two sets of four guanine layers, with four layers each of four daunomycins stacked between the 5' faces of the two quadruplexes. The daunomycin layers fall into two groups which are novel in their mode of self assembly. The only contacts between daunomycin molecules within any one of these layers are van der Waals interactions, however there is substantial π-π stacking between successive daunomycin layers and also with adjacent guanine layers. The structure differs significantly from all other parallel d(TGGGGT)(4) quadruplexes in that the 5' guanine adopts the unusual syn glycosyl linkage, refuting the widespread belief that such conformations should all be anti. In contrast to the related d(TGGGGT)/daunomycin complex, there are no ligand-quadruplex groove insertion interactions.

  7. The loss of glucose-regulated protein 78 (GRP78) during normal aging or from siRNA knockdown augments human alpha-synuclein (α-syn) toxicity to rat nigral neurons.

    Science.gov (United States)

    Salganik, Maxim; Sergeyev, Valeriy G; Shinde, Vishal; Meyers, Craig A; Gorbatyuk, Marina S; Lin, Jonathan H; Zolotukhin, Sergey; Gorbatyuk, Oleg S

    2015-06-01

    Age-related structural changes and gradual loss of key enzymes significantly affect the ability of the endoplasmic reticulum (ER) to facilitate proper protein folding and maintain homeostasis. In this work, we present several lines of evidence supporting the hypothesis that the age-related decline in expression of the ER chaperone glucose-regulated protein 78 (GRP78) could be related to the development of Parkinson's disease. We first determined that old (24 months) rats exhibit significantly lower levels of GRP78 protein in the nigrostriatal system as compared with young (2 months) animals. Then using recombinant adeno-associate virus-mediated gene transfer, we found that GRP78 downregulation by specific small interfering RNAs (siRNAs) aggravates alpha-synuclein (α-syn) neurotoxicity in nigral dopamine (DA) neurons. Moreover, the degree of chaperone decline corresponds with the severity of neurodegeneration. Additionally, comparative analysis of nigral tissues obtained from old and young rats revealed that aging affects the capacity of nigral DA cells to upregulate endogenous GRP78 protein in response to human α-syn neurotoxicity. Finally, we demonstrated that a sustained increase of GRP78 protein over the course of 9 months protected aging nigral DA neurons in the α-syn-induced rat model of Parkinson's-like neurodegeneration. Our data indicate that the ER chaperone GRP78 may have therapeutic potential for preventing and/or slowing age-related neurodegeneration.

  8. Enhanced Ras activity in pyramidal neurons induces cellular hypertrophy and changes in afferent and intrinsic connectivity in synRas mice.

    Science.gov (United States)

    Gärtner, Ulrich; Alpár, Alán; Seeger, Gudrun; Heumann, Rolf; Arendt, Thomas

    2004-05-01

    Neurotrophic actions are critically controlled and transmitted to cellular responses by the small G protein Ras which is therefore essential for normal functioning and plasticity of the nervous system. The present study summarises findings of recent studies on morphological changes in the neocortex of synRas mice expressing Val12-Ha-Ras in vivo under the control of the rat synapsin I promoter. In the here reported model (introduced by Heumann et al. [J. Cell Biol. 151 (2000) 1537]), transgenic Val12-Ha-Ras expression is confined to the pyramidal cell population and starts postnatally at a time, when neurons are postmitotic and their developmental maturation has been basically completed. Expression of Val12-Ha-Ras results in a significant enlargement of pyramidal neurons. Size, complexity and spine density of dendritic trees are increased, which leads, finally, to cortical expansion. However, the main morphological design principles of 'transgenic' pyramidal cells remain preserved. In addition to somato-dendritic changes, expression of Val12-Ha-Ras in pyramidal cells induces augmented axon calibres and upregulates the establishment of efferent boutons. Despite the enlargement of cortical size, the overall density of terminals representing intra- or interhemispheric, specific and non-specific afferents is unchanged or even higher in transgenic mice suggesting a significant increase in the total afferent input to the neocortex. Although interneurons do not express the transgene and are therefore excluded from direct, intrinsic Val12-Ha-Ras effects, they respond with morphological adaptations to structural changes. Thus, dendritic arbours of interneurons are extended to follow the cortical expansion and basket cells establish a denser inhibitory innervation of 'transgenic' pyramidal cells perikarya. It is concluded that expression of Val12-Ha-Ras in pyramidal neurons results in remodelling of neocortical structuring which strongly implicates a crucial involvement of

  9. Analog modeling and kinematic restoration of inverted hangingwall synclinal basins developed above syn-kinematic salt: Application to the Lusitanian and Parentis basins

    Science.gov (United States)

    Roma, Maria; Vidal-Royo, Oskar; McClay, Ken; Ferrer, Oriol; Muñoz, Josep Anton

    2017-04-01

    The formation of hagingwall syncline basins is basically constrained by the geometry of the basement-involved fault, but also by salt distribution . The formation of such basins is common around the Iberian Peninsula (e.g. Lusitanian, Parentis, Basque-Cantabian, Cameros and Organyà basins) where Upper Triassic (Keuper) salt governed their polyphasic Mesozoic extension and their subsequent Alpine inversion. In this scenario, a precise interpretation of the sub-salt faults geometry and a reconstruction of the initial salt thickness are key to understand the kinematic evolution of such basins. Using an experimental approach (sandbox models) and these Mesozoic basins as natural analogues, the aim of this work is to: 1) investigate the main parameters that controlled the formation and evolution of hagingwall syncline basins analyzing the role of syn-kinematic salt during extension and subsequent inversion; and 2) quantify the deformation and salt mobilization based on restoration of analog model cross sections. The experimental results demonstrate that premature welds are developed by salt deflation with consequent upward propagation of the basal fault in salt-bearing rift systems with a large amount of extension,. In contrast, thicker salt inhibits the upward fault propagation, which results into a further salt migration and development of a hagingwall syncline basins flanked by salt walls. The inherited extensional architecture as well as salt continuity dramatically controlled subsequent inversion. Shortening initially produced the folding and the uplift of the synclinal basins. Minor reverse faults form as a consequence of overtightening of welded diapir stems. However, no trace of reverse faulting is found around diapirs stems, as ductile unit is still available for extrusion, squeezing and accommodation of shortening. Restoration of the sandbox models has demonstrated that this is a powerful tool to unravel the complex structures in the models and this may

  10. Regional comparison of syn- and post-rift sequences in salt and salt-free basins offshore Brazil and Angola/Namibia, South Atlantic

    Science.gov (United States)

    Strozyk, Frank; Back, Stefan; Kukla, Peter

    2015-04-01

    The large South Atlantic basins offshore South America and Africa record a highly variable syn- to post-breakup tectono-stratigraphic development. The present-day diversity in the structural and sedimentary architecture of the conjugate margins offshore southern Brazil, Namibia and Angola reflects variations in the interplay of a number of controlling factors, of which the most important are i) the structural configuration of each margin segment at the time of break-up, ii) the post break-up geodynamic history including tectonics and magmatism, and iii) variations in the type, quantity and distribution of sediment input to the respective margin segment. Particularly the basins around the Rio Grande Rise - Walvis Ridge volcanic complex show a pronounced tectono-stratigraphic asymmetry both along the respective continental margin and across the Atlantic. Only a few attempts exist to establish a regional tectono-stratigraphic correlation framework across the South Atlantic Ocean, mainly because of the lack of data across entire margin segments and limited resolution of basin wide geophysics. Still unresolved issues particularly concern the explanation of the basin-specific geological evolution of respective margin segments along the same continental margin, as well as the correlation of conjugate basins and margin segments across the Atlantic Ocean. In our study we present interpretations and first-pass restorations of regional 2D seismic-reflectivity data from the large basins offshore Brazil (Pelotas Basin, Santos Basin, Campos Basin, Espirito Santo Basin), and offshore Namibia and Angola (Walvis Basin, Namibe Basin, Benguela Basin, Kwanza Basin), which represent four adjacent pairs of conjugate basins on both sides of the South Atlantic. Results are used to document and compare on a basin-scale the contrasting styles of rift and post-rift settings during and after the continental breakup.

  11. Investigating syn- vs. post-eruption hydration mechanisms of the 2012 Havre submarine explosive eruption: Water speciation analysis of pumiceous rhyolitic glass

    Science.gov (United States)

    Mitchell, S. J.; McIntosh, I. M.; Houghton, B. F.; Shea, T.; Carey, R.

    2016-12-01

    Volatiles preserved in volcanic glass can record the quenching, fragmentation and solubility conditions during an explosive eruption. The VEI-5 2012 eruption of Havre volcano, which produced >1.5 km3 of rhyolite, provides exciting new insight into deep-submarine explosive eruptions. With no direct observations of the eruption at the 900 mbsl vent, the analysis and interpretation of volatile concentrations and speciation within pyroclasts is essential to constraining the eruption style and quenching mechanisms in this understudied environment. We present here the first detailed water speciation data for a large submarine explosive eruption. Water concentrations were measured in pyroclasts from known deposit localities across the Havre stratigraphic succession after ROV collection in 2015. Variations in total water concentration (H2OT) within pyroclasts were determined using high spatial resolution (1 - 2 µm) micro-Raman spectroscopy and water speciation (molecular water (H2Om) and OH) concentrations were measured using Fourier-transform infrared spectroscopy. H2OT concentrations are consistent between Raman and FTIR analysis, ranging from 0.1 - 1.5 wt % H2OT over different stratigraphic units. Comparison of water speciation data with speciation models suggests the Havre pyroclasts experienced secondary, non-magmatic hydration. Since OH is unaltered by secondary hydration, OH concentrations aid in the interpretation of quench depths and inferring of eruption mechanisms. The variability of excess H2Om across units suggests a more complex glass-hydration mechanism during the eruption instead of exclusively post-eruption, low-temperature secondary rehydration. The young sample ages are inconsistent with our current understanding of low-temperature H2O-diffusivity timescales, implying faster secondary rehydration in a higher-temperature submarine setting. We here explore potentially novel syn-eruptive, higher-temperature hydration mechanisms for deep-submarine pumice.

  12. Syn-convergence extension in the southern Lhasa terrane: Evidence from late Cretaceous adakitic granodiorite and coeval gabbroic-dioritic dykes

    Science.gov (United States)

    Ma, Xuxuan; Xu, Zhiqin; Meert, Joseph G.

    2017-10-01

    Late Cretaceous (∼100-80 Ma) magmatism in the Gangdese magmatic belt plays a pivotal role in understanding the evolutionary history and tectonic regime of the southern Lhasa terrane. The geodynamic process for the formation of the early Late Cretaceous magmatism has long been an issue of hot debates. Here, petrology, geochronology and geochemistry of early Late Cretaceous granodiorite and coeval gabbroic-dioritic dykes in the Caina region, southern Lhasa, were investigated in an effort to ascertain their petrogenesis, age of intrusion, magma mixing and tectonic setting. Zircon U-Pb dating of granodiorite yields 206Pb/238U ages of 85.8 ± 1.7 and 86.4 ± 1.1 Ma, whilst that of the E-W trending dykes yields ages of 82.7 ± 2.6 and 83.5 ± 3.5 Ma. Within error, the crystallization ages of the dykes and the granodiorite are indistinguishable. Field observations and mineralogical microstructures are suggestive of a magma mixing process during the formation of the dykes and the granodiorite. The granodiorite exhibits geochemical features that are in agreement with those of subduction-related high-SiO2 adakites. The granodiorite and dykes have relatively constant εNd(t) values of +2.2 to +4.9 and initial 87Sr/86Sr ratios (0.7045-0.7047). These similar characteristics are herein interpreted as an evolutionary series from the dykes to granodiorite, consistent with magma mixing process. Ti-in-zircon thermometer and Al-in-hornblende barometer indicate that the granodiorite and the dioritic dyke crystallized at temperatures of ca. 750 and 800 °C, depths of ca. 6-10 and 5-9 km, respectively. Taking into account the synchronous magmatic rocks in the Gangdese Belt and the coeval rifted basin within the Lhasa terrane, the granodiorite and dykes reveal an early Late Cretaceous syn-convergence extensional regime in the southern Lhasa terrane, triggered by slab rollback of the Neotethyan oceanic lithosphere.

  13. Petrology of HP/LT metapelitic rocks of an accretionary wedge, the Central Pontides, Turkey: evidence for tectonic stacking and syn-subduction exhumation

    Science.gov (United States)

    Aygül, Mesut; Okay, Aral; Oberhänsli, Roland

    2015-04-01

    Cretaceous HP/LT chloritoid-bearing metapelitic rocks crop out widely in the central part of the Pontides, northern Turkey. They are associated with eclogite to blueschist-facies metabasites and represent deep levels of an underplated subduction-accretion complex, which is tectonically overlain by low-grade HP phyllite/metasandstone intercalation along an extensional shear zone. Close to the shear zone, the footwall micaschists consist of quartz, phengite, paragonite, chlorite, rutile with syn-kinematic albite porphyroblast formed by pervasive shearing during exhumation. This type of micaschists is tourmaline-bearing and their retrograde nature suggests high-fluid flux along shear zones. Peak metamorphic assemblages are partly preserved in the chloritoid-micaschist farther away from the shear zone. Three peak metamorphic assemblages are identified and their PT conditions are constrained by pseudosections produced by Theriak-Domino and by Raman spectra of carbonaceous material: 1) garnet-chloritoid-glaucophane with lawsonite pseudomorphs (P: 17.5 ± 1 Kbar, T: 390-450 °C) 2) chloritoid with glaucophane pseudomorphs (P: 16-18 Kbar, T: 475 ± 40 °C) and 3) relatively high-Mg chloritoid (17%) with jadeite pseudomorphs (22-25 Kbar; T: 440 ± 30 °C) in addition to phengite, paragonite, quartz, chlorite, rutile. The last mineral assemblage is interpreted as transformation of the chloritoid + glaucophane assemblage to chloritoid + jadeite paragenesis with increasing pressure. Absence of tourmaline suggests that the chloritoid-micaschist did not interact with B-rich fluids during zero strain exhumation. Peak metamorphic assemblages and PT estimates suggest tectonic stacking within wedge with different depths of burial. 40Ar/39Ar phengite age of a pervasively sheared footwall micaschist is constrained to 100.6 ± 1.3 Ma and that of a chloritoid-micaschist is constrained to 91.8 ± 1.8 Ma suggesting exhumation during on-going subduction. Coupling and exhumation of the

  14. Fluid systems and fracture development during syn-depositional fold growth: example from the Pico del Aguilla anticline, Sierras Exteriores, Southern Pyrenees, Spain.

    Science.gov (United States)

    Beaudoin, Nicolas; Huyghe, Damien; Bellahsen, Nicolas; Lacombe, Olivier; Emmanuel, Laurent; Mouthereau, Frédéric; Ouanhon, Laure

    2014-05-01

    This study presents a reconstruction of fold-fracture-fluid evolution at the Pico del Aguila Anticline, located on the southwestern front of the Jaca piggy-back basin, Southern Pyrenees, Spain. The kinematic evolution of the Pico del Aguila anticline is related to the successive development of N-S ramps and reactivation of E-W striking basement thrusts that occurred coevally with sedimentation in the foreland basin. Consequently, this anticline offers an ideal frame to assess the evolution of the fluid system during the syn-depositional deformation at the front of a fold-thrust belt. Eight fracture sets (joints or faults) observed at fold-scale compose the fracture sequence defined by field and micro-scale chronological relationships. This fracture sequence reflects the Middle Eocene to Early Oligocene tectonic events and the progressive rotation of some fracture sets from NE-SW to E-W witnesses the clockwise rotation that occurred during folding. ∂18O and ∂13C values from vein cements suggest a fluid system buffered by host rocks in most cases. Fluid inclusion microthermometry measurements indicate a fluid entrapment temperature <50°C, supporting that the fluid system reflects strata burial during the main part of strata history. Small-scale vertical migrations from reservoir to reservoir are triggered by fractures related to strata-curvature, both during foreland flexure/forebulge and fold development. After folding, fractures developing in shallow sub-continental to continental strata triggered downward migration of surficial fluids, likely of meteoric origin. This phenomenon is poorly developed in early marine deposits but strongly influenced the fluid system recorded in the late continental deposits. The case study of the Pico del Aguila supports recent finding that fold-fluid systems seem to exhibit a common behavior during folding, with development of curvature-related joints triggering vertical migration of fluids from a reservoir to another. It also

  15. Focal point analysis of torsional isomers of acrylic acid

    Science.gov (United States)

    Alev Çiftçioğlu, Gökçen; Trindle, Carl; Yavuz, Ilhan

    2010-10-01

    The thermochemistry of acrylic acid has presented challenges owing to its high reactivity, tendency to dimerize in the gas phase, and the existence of two very nearly equal energy conformational isomers. Well-tested thermochemical schemes including G2, G3, G4, and CBS-QB3 agree in the prediction that the s-cis syn structure is the most stable of the torsional isomers, with the s-cis anti form lying 3 kJ mol-1 or less higher in energy. Microwave spectra suggest a value of 0.63 kJ mol-1. The energy barrier between these forms is in the neighbourhood of 25 kJ mol-1 according to a MP2/cc-pVDZ calculation. We present estimates of the relative energies of all four torsional isomers and the rotational barrier based on a variant of the Focal Point Analysis developed by Császár and co-workers. These calculations, extending to the CCSD(T)/cc-pV5Z level, predict that the s-cis anti torsional isomer is the most stable form, in contrast to prior estimates. The s-cis syn form lies about 2.9 kJ mol-1 higher, while the s-trans syn and anti forms lie at about 21.7 and 23.3 kJ mol-1, respectively. We estimate the rotational barrier between the s-cis trans and s-cis anti structures to be about 23.9 kJ mol-1. Error ranges derived from the fit to extrapolation forms suggest that our estimates have an uncertainty of about 0.1 kJ mol-1.

  16. Acidic deposition ("acid rain")

    Science.gov (United States)

    Schreiber, R. Kent; LaRoe, Edward T.; Farris, Gaye S.; Puckett, Catherine E.; Doran, Peter D.; Mac, Michael J.

    1995-01-01

    Acidic deposition, or "acid rain," describes any form of precipitation, including rain, snow, and fog, with a pH of 5.5 or below (Note: pH values below 7 are acidic; vinegar has a pH of 3). It often results when the acidity of normal precipitation is increased by sulfates and nitrates that are emitted into the atmosphere from burning fossil fuels. This form of airborne contamination is considered harmful, both directly and indirectly, to a host of plant and animal species.Although acid rain can fall virtually anywhere, ecological damages in environmentally sensitive areas downwind of industrial and urban emissions are a major concern. This includes areas that have a reduced capacity to neutralize acid inputs because of low alkalinity soils and areas that contain species with a low tolerance to acid conditions. To determine the distribution of acidic deposition and evaluate its biological effects, research and monitoring are being conducted by the federal government with support from states, universities, and private industry.            The national extent of the acid rain problem has been estimated by sampling water from 3,000 lakes and 500 streams (Irving 1991), representing more than 28,000 lakes and 56,000 stream reaches with a total of 200,000 km (125,000 mi). Some particularly sensitive areas, such as the Adirondack Mountain region, have been more intensively sampled and the biota examined in detail for effects from acidity.         To identify trends in aquatic ecosystems, present and historical survey data on water chemistry and associated biota are compared. In lakes, the chemical and biological history and pH trends may be inferred or reconstructed in some cases by examining assemblages of fossil diatoms and aquatic invertebrates in the sediment layers. In terrestrial ecosystems, vegetation damage is surveyed and effects of acidic deposition to plants and animals are determined from laboratory and field exposure experiments. Natural

  17. Fluid Inclusion characteristics of syn-late orogenic Co-Ni-Cu-Au deposits in the Siegerland District of the Rhenish Massif, Germany

    Science.gov (United States)

    Wohlgemuth, Christoph; Hellmann, André; Meyer, Franz Michael

    2013-04-01

    The Siegerland District is located in the fold-and-thrust-belt of the Rhenish Massif and hosts various syn- late orogenic vein-hosted hydrothermal mineralization types. Peak-metamorphism and deformation occurred at 312-316 ± 10 Ma (Ahrendt et al., 1978) at pT-conditions of 280 - 320 °C and 0.7 - 1.4 kbar (Hein, 1993). The district is known for synorogenic siderite-quartz mineralization formed during peak-metamorphic conditions. At least 4 syn-late orogenic mineralization types are distinguished: Co-Ni-Cu-Au, Pb-Zn-Cu, Sb-Au and hematite-digenite-bornite mineralization (Hellmann et al., 2012b). Co-Ni-Cu-Au mineralization of the Siegerland District belongs to the recently defined class of metasediment hosted synorogenic Co-Cu-Au deposits (i.e. Slack et al, 2010). Ore minerals are Fe-Co-Ni sulpharsenides, bearing invisible gold, chalcopyrite, and minor As-bearing pyrite. The gangue is quartz. The alteration mineralogy comprises chlorite, illite-muscovite and quartz. The epigenetic quartz veins are closely related to the formation of reverse faults (Hellmann et al., 2011a). Microthermometric studies of fluid inclusions concerning the relationship between mineralization and microstructures have not been done so far for this deposit-class and this will be addressed here. Fluid inclusions are investigated in hydrothermally formed vein-quartz, selected from Co-Ni-Cu-Au mineralization bearing veins showing only minor overprints by later mineralization types. Two quartz generations are distinguished: subhedral quartz-I showing growth zonation and fine grained, recrystallized- and newly formed quartz-II grains forming irregular masses and fracture fillings in quartz-I. Co-Ni-Fe sulpharsenides and chalcopyrite are closely intergrown with quartz-II, implying their contemperaneous formation. However, fluid inclusions in quartz-II are often small, therefore fluid inclusions in quartz-I have been mostly investigated. In total, 180 inclusions from 4 different deposits have been

  18. Diastereo- and enantioselective synthesis of (E)-2-Methyl-1,2-syn- and (E)-2-Methyl-1,2-anti-3-pentenediols via allenylboronate kinetic resolution with ((d)Ipc)2BH and aldehyde allylboration.

    Science.gov (United States)

    Han, Jeng-Liang; Chen, Ming; Roush, William R

    2012-06-15

    Enantioselective hydroboration of racemic allenylboronate (±)-1 with 0.48 equiv of ((d)Ipc)(2)BH at -25 °C proceeds with efficient kinetic resolution and provides allylborane (R)-Z-4. When heated to 95 °C, allylborane (R)-Z-4 isomerizes to the thermodynamically more stable allylborane isomer (S)-E-7. Subsequent allylboration of aldehydes with (R)-Z-4 or (S)-E-7 at -78 °C followed by oxidative workup provides 1,2-syn- or 1,2-anti-diols, 2 or 3, respectively, in 87-94% ee.

  19. 基于Linux平台防止IP欺骗的SYN攻击防火墙的设计与实现%Design and implementation of Linux-based firewall preventing IP spoofing SYN attack

    Institute of Scientific and Technical Information of China (English)

    夏跃伟; 牛文倩; 刘金广

    2014-01-01

    Currently,SYN FLOOD attack occupies 70%~80% in total attacks,among which IP spoofing is a commonly used way. How to prevent IP spoofing SYN attack has become a research hotspot. A packet filtering firewall resisting SYN attack was designed and realized on the basis of redhat5.0 platform and RED algorithm. The firewall judges the dropping probability of a data packet in the case of mild and moderate attack. The data packets is stored in the hash table if it is discarded,and then the host computer waits for the client to retransmit TCP connection request and checks the authenticity of the IP address. The analysis and experimental verification results indicate that it has better throughput,and its normal data packet passing rate is al-so high. When it subjects to severe attacks,the random discard packets in RED is used directly.%目前,SYN FLOOD攻击占70%~80%。IP欺骗是常用的方式,如何防止IP欺骗的SYN攻击成为研究热点。设计是以redhat 5.0为平台,结合RED算法设计并实现一个抗SYN攻击的包过滤防火墙,该防火墙在轻度和中度攻击的情况下判断一个数据包的丢弃概率,当被丢弃则保存该数据包到哈希表中,主机等待客户机重传TCP连接请求,检测是否是真实性的IP地址,经过分析研究和实验的验证具有较好的吞吐量,同时正常数据包的通过率很高。当遭受的是重度攻击时,则直接采用的是RED中的随机丢弃数据包。

  20. Thiacyclophane cages and related bi- and tripodal molecules via transient polysulfenic acids.

    Science.gov (United States)

    Aversa, Maria Chiara; Barattucci, Anna; Bonaccorsi, Paola; Faggi, Cristina; Papalia, Teresa

    2007-06-08

    A series of bis- and tris-bridged thiacyclophane S-oxides, as racemates or meso products, have been synthesized with a new procedure. Starting from the corresponding thiols, in three steps, transient polyarene- and polyarylmethane-sulfenic acids were generated in the presence of di- and triethynylbenzenes. The thermal syn-addition of these sulfenic acids onto the triple bonds of the unsaturated acceptors was conducted in CH2Cl2 at 40 degrees C. The concentration of sulfoxide precursors of sulfenic acid and the sulfoxide/acceptor molar ratio addressed the syn-addition toward open-chain benzene sulfoxides or thiacyclophane S-oxides. Complete stereochemical control was observed in some reactions between polysulfenic acids and ethynylbenzenes, where the meso dithiacyclophane S,S'-dioxides were obtained exclusively, whereas 1:1 mixtures of meso/rac dithiacyclophanes S,S'-dioxides were isolated as products of other reactions. In almost all the cases, the obtained compounds were separated by column chromatography. The structure assignment of the new heterophanes was done on the basis of their diagnostic NMR spectra and X-ray crystallographic analysis of some of them. Open-chain polysulfinyl and polysulfinylmethyl benzenes, obtained as meso/rac mixtures, were separated and the products were fully characterized. Both synthesized cages, including trithia[3(3)](1,3,5)cyclophane S,S',S' '-trioxides, and bi- and tripodal benzene sulfoxides, appear promising in the field of coordination and material chemistry.

  1. Development of a Lithocodium (syn. Bacinella irregularis-reef-mound- A patch reef within Middle Aptian lagoonal limestone sequence near Nova Gorica (Sabotin Mountain, W-Slovenia

    Directory of Open Access Journals (Sweden)

    Roman Koch

    2002-06-01

    .Using different time lines (marker horizons for correlation it can be shown that already very early differential compaction of fine-grained uncemented sediments in comparison to the core area of the patch reef is of great importance.The greater thickness of the patch reef itself is caused by an intensive early diagenetic marine phreatic cementation within the core zone and by the early fixing of sediment by Lithocodium aggregatum (syn. Bacinella irregularis resulting in a greater resistivity against compaction. Furthermore a lagoonal side and an more open marine side of the patch reef can be determined. Lithocodium aggregatum is the main constructing organism within the buildup investigated, beginning with the incrustation of varying substrates and biogenic particles. Finally, a dense network of encrustation-sequences is formed interfingering with the general sedimentary textures intensively and resulting in larger „biogeniccemented“ patches within the sediment.The correlation of the three profiles A, B, and C allows to reveal the history of differential compaction of the associated lagoonal sediments in comparison to the more massive patch reef limestones. It becomes obvious that the main compaction must have occurred within the time span of about 50 m sediment-deposition overlying the patch reef. Differential compaction resulted in differences in thickness of about 10 m from the patch reef (profile B to the more lagoonal influenced sediments (profile A within a lateral distance of about 50 m.

  2. AKTIVITAS ANTIOKSIDAN SENYAWA FLAVONOID EKSTRAK ETANOL BIJI TERONG BELANDA (Solanum betaceum, syn DALAM MENGHAMBAT REAKSI PEROKSIDASI LEMAK PADA PLASMA DARAH TIKUS WISTAR

    Directory of Open Access Journals (Sweden)

    Ni Wayan Oktarini A.C.Dewi

    2014-06-01

    Full Text Available ABSTRAK : Penelitian ini bertujuan untuk mengetahui aktivitas antioksidan dari biji terong belanda dalam menghambat reaksi peroksidasi lemak plasma darah pada tikus dan menentukan golongan flavonoid yang aktif sebagai antioksidan. Uji aktivitas antioksidan dilakukan dengan metode DPPH dan pengukuran kadar MDA darah tikus Wistar. Partisi ekstrak etanol biji menghasilkan fraksi n-heksan, etil asetat, dan n-butanol. Fraksi etil asetat dan n-butanol positif mengandung senyawa flavonoid. Uji aktivitas antioksidan menggunakan metode DPPH menunjukkan bahwa fraksi etil asetat memiliki aktivitas antioksidan lebih besar dengan nilai IC50 1162,608 ppm. Fraksi etil asetat dipisahkan dengan kromatografi kolom menggunakan eluen n-heksan:etil asetat:n-butanol (6:4:0,1, diperoleh dua fraksi (Fraksi A dan fraksi B. Analisis dengan spektroskopi inframerah menunjukkan bahwa kedua isolat diduga mengandung gugus fungsi yang sama (OH, CH, C=O, C=C aromatik, C-O, CH alifatik. Analisis dengan spektroskopi UV-Vis diindikasikan bahwa fraksi A merupakan golongan dihidroflavonol dengan gugus hidroksi pada cincin A yaitu pada atom C-6, C-7 atau C-7, C-8 dan fraksi B merupakan golongan flavanon dengan gugus hidroksi pada cincin A yaitu pada atol C-7 dan C-8. Hasil analisis statistik pada pengukuran kadar MDA darah tikus Wistar menunjukkan bahwa fraksi etil asetat dengan dosis 200 mg/kgBB mampu menurunkan kadar MDA darah tikus Wistar yang diberi aktivitas fisik maksimal. Kata kunci : Solanum betaceum, syn, malondialdehid, peroksidasi lemak, flavonoid ABSTRACT : The aims of this study are to determine the antioxidant activity of flavonoid compounds extracted from  Dutch eggplant seeds in inhibiting lipid peroxidation reactions in the Wistar rat blood plasma and to determine the active flavonoid compounds as antioxidants. The test of antioxidant activity was carried out with DPPH (diphenilpikril hidrazil method and measurment of MDA (malondialdehyde level of blood of the

  3. U-Th-PbT Monazite Gechronology in the South Carpathian Basement: Variscan Syn-Metamorphic Tectonic Stacking and Long-Lasting Post-Peak Decompressional Overprints

    Science.gov (United States)

    Săbău, G.; Negulescu, E.

    2012-12-01

    -tuned by comparison with the general probability function calculated from all individual age and error values. Monazite chemical compositions and variations, in connection with the textural and zonal setting of the analyzed spots, were used to estimate the geological relevance of the derived age clusters, along with inter-sample comparisons anchored on granitoid samples displaying well-expressed age plateaus, conspicuously related to consolidation and emplacement ages. The resultant ages are consistent with sandwiching of juvenile Variscan metamorphic units and slivers of reworked older basement fragments in structurally coherent sequences, formed by syn/late-metamorphic tectonic stacking. Differential exhumation and ensuing areal or local lower pressure overprinting initiated in early Permian lasted up until the Late Jurassic. The age distribution of the pervasive metamorphic overprints, in consistency with the variation of the metamorphic conditions recorded, requires a partial revision and an iterative adjustment between determined ages and metamorphic features, and the lithostratigraphic separations operated in several basement units of the South Carpathians. Acknowledgements Grant PN-II-ID-PCE-2011-3-0030 by the Romanian Executive Unit for Financing Higher Education, Research, Development and Innovation (UEFISCDI)

  4. Pre-, syn-, and postcollisional stratigraphic framework and provenance of upper triassic-upper cretaceous strata in the northwestern talkeetna mountains, alaska

    Science.gov (United States)

    Hampton, B.A.; Ridgway, K.D.; O'Neill, J. M.; Gehrels, G.E.; Schmidt, J.; Blodgett, R.B.

    2007-01-01

    by previously unrecognized nonmarine strata informally referred to here as the Caribou Pass formation. This unit is at least 250 m thick and has been tentatively assigned an Albian-Cenomanian-to-younger age based on limited palynomorphs and fossil leaves. Sandstone composition (Q-65% F-9% L-26%-Lv-28% Lm-52% Ls-20%) from this unit suggests a quartz-rich metamorphic source terrane that we interpret as having been the Yukon-Tanana terrane. Collectively, provenance data indicate that there was a fundamental shift from mainly arc-related sediment derivation from sources located south of the study area during Jurassic-Early Cretaceous (Aptian) time (Kahiltna assemblage) to mainly continental margin-derived sediment from sources located north and east of the study area by Albian-Cenomanian time (Caribou Pass formation). We interpret the threepart stratigraphy defined for the northwestern Talkeetna Mountains to represent pre- (the Honolulu Pass formation), syn- (the Kahiltna assemblage), and post- (the Caribou Pass formation) collision of the Wrangellia composite terrane with the Mesozoic continental margin. A similar Mesozoic stratigraphy appears to exist in other parts of south-central and southwestern Alaska along the suture zone based on previous regional mapping studies. New geologic mapping utilizing the three-part stratigraphy interprets the northwestern Talkeetna Mountains as consisting of two northwest-verging thrust sheets. Our structural interpretation is that of more localized thrust-fault imbrication of the three-part stratigraphy in contrast to previous interpretations of nappe emplacement or terrane translation that require large-scale displacements. Copyright ?? 2007 The Geological Society of America.

  5. Using vein fabric and fluid inclusion characteristics as an integrated proxy to constrain the relative timing of non cross-cutting, syn- to late-orogenic quartz vein generations

    Science.gov (United States)

    Jacques, Dominique; Muchez, Philippe; Sintubin, Manuel

    2014-05-01

    Research on ancient fluid systems mainly focuses on veins, because they offer the opportunity to combine macro- and microstructural data with geochemical data to gain insight into the P-T-X conditions present during veining. By applying such an integrated petrographic and microthermometric methodology to syn- to late-orogenic quartz veins in the Palaeozoic High-Ardenne slate belt (Belgium), we were able to define the relative timing and related P-T-X conditions of different quartz vein generations, despite of the absence of any mutual cross-cutting relationships in the field (Jacques et al., 2014). The different quartz vein generations represent the meso-scale brittle accommodation during fold initiation, amplification and locking. The presence of free polycrystal growth in cavities at a midcrustal depth, and fluid-assisted brecciation indicate that veining occurred under overpressured fluid conditions during the orogeny. Significant differences in crystal-plastic deformation microstructures and P-T trapping conditions indicate that the different processes accommodating folding occurred in a progressive manner along a retrograde deformation path. While vein quartz in an extrados vein and in the peripheral part of a lenticular, fault-accommodating vein shows moderate crystal-plastic deformation (e.g. bulging recrystallisation, deformation lamellae, shear bands), crystal-plastic deformation is relatively absent in the vein quartz of a saddle reef and the core of the lenticular vein (i.e. no to minor undulose extinction). Successive veining occurred from peak metamorphic conditions (ca. 300 ° C and 190 MPa), measured in the extrados vein, to lower P-T conditions in the periphery of the lenticular vein (ca. 275 ° C and 180 MPa), the late-orogenic saddle reef (ca. 245 ° C and 160 MPa) and the core of the lenticular vein (ca. 220 ° C and 150 MPa). The relative timing and accompanying decrease in P-T conditions of the different quartz vein generations reflect the

  6. Kinematics of syn- and post-exhumational shear zones at Lago di Cignana (Western Alps, Italy): constraints on the exhumation of Zermatt-Saas (ultra)high-pressure rocks and deformation along the Combin Fault and Dent Blanche Basal Thrust

    Science.gov (United States)

    Kirst, Frederik; Leiss, Bernd

    2017-01-01

    Kinematic analyses of shear zones at Lago di Cignana in the Italian Western Alps were used to constrain the structural evolution of units from the Piemont-Ligurian oceanic realm (Zermatt-Saas and Combin zones) and the Adriatic continental margin (Dent Blanche nappe) during Palaeogene syn- and post-exhumational deformation. Exhumation of Zermatt-Saas (U)HP rocks to approximately lower crustal levels at ca. 39 Ma occurred during normal-sense top-(S)E shearing under epidote-amphibolite-facies conditions. Juxtaposition with the overlying Combin zone along the Combin Fault at mid-crustal levels occurred during greenschist-facies normal-sense top-SE shearing at ca. 38 Ma. The scarcity of top-SE kinematic indicators in the hanging wall of the Combin Fault probably resulted from strain localization along the uppermost Zermatt-Saas zone and obliteration by subsequent deformation. A phase of dominant pure shear deformation around 35 Ma affected units in the direct footwall and hanging wall of the Combin Fault. It is interpreted to reflect NW-SE crustal elongation during updoming of the nappe stack as a result of underthrusting of European continental margin units and the onset of continental collision. This phase was partly accompanied and followed by ductile bulk top-NW shearing, especially at higher structural levels, which transitioned into semi-ductile to brittle normal-sense top-NW deformation due to Vanzone phase folding from ca. 32 Ma onwards. Our structural observations suggest that syn-exhumational deformation is partly preserved within units and shear zones exposed at Lago di Cignana but also that the Combin Fault and Dent Blanche Basal Thrust experienced significant post-exhumational deformation reworking and overprinting earlier structures.

  7. Crystal structure of the bis(cyclohexylammonium succinate succinic acid salt adduct

    Directory of Open Access Journals (Sweden)

    Modou Sarr

    2015-08-01

    Full Text Available The crystal structure of the title salt adduct, 2C6H14N+·C4H4O42−·C4H6O4, consists of two cyclohexylammonium cations, one succcinate dianion and one neutral succinic acid molecule. Succinate dianions and succinic acid molecules are self-assembled head-to-tail through O—H...O hydrogen bonds and adopt a syn–syn configuration, leading to a strand-like arrangement along [101]. The cyclohexylammonium cations have a chair conformation and act as multidentate hydrogen-bond donors linking adjacent strands through intermolecular N—H...O interactions to both the succinate and the succinic acid components. This results in two-dimensional supramolecular layered structures lying parallel to (010.

  8. N-(3-Chloro-4-methyl-phen-yl)succinamic acid.

    Science.gov (United States)

    Chaithanya, U; Foro, Sabine; Gowda, B Thimme

    2012-03-01

    In the crystal structure of the title compound, C(11)H(12)ClNO(3), the asymmetric unit contains two independent mol-ecules. The N-H bond in the amide segment is anti to the meta-Cl atom in the benzene ring, in both molecules. The amide and carboxyl C=O bonds are also anti to each other and anti to the H atoms on the adjacent -CH(2) groups. Furthermore, the C=O and O-H bonds of the acid group are in syn positions with respect to each other. The dihedral angles between the benzene ring and the amide group are 40.6 (2) and 44.9 (3)° in the two independent molecules. In the crystal, mol-ecules are packed into sheets parallel to the (11-3) plane through O-H⋯O and N-H⋯O hydrogen bonds.

  9. Lewis base activation of Lewis acids: catalytic, enantioselective addition of glycolate-derived silyl ketene acetals to aldehydes.

    Science.gov (United States)

    Denmark, Scott E; Chung, Won-Jin

    2008-06-20

    A catalytic system involving silicon tetrachloride and a chiral, Lewis basic bisphosphoramide catalyst is effective for the addition of glycolate-derived silyl ketene acetals to aldehydes. It was found that the sense of diastereoselectivity could be modulated by changing the size of the substituents on the silyl ketene acetals. In general, the trimethylsilyl ketene acetals derived from methyl glycolates with a large protecting group on the alpha-oxygen provide enantiomerically enriched alpha,beta-dihydroxy esters with high syn-diastereoselectivity, whereas the tert-butyldimethylsilyl ketene acetals derived from bulky esters of alpha-methoxyacetic acid provide enantiomerically enriched alpha,beta-dihydroxy esters with high anti-diastereoselecitvity.

  10. Valproic Acid

    Science.gov (United States)

    ... acid is in a class of medications called anticonvulsants. It works by increasing the amount of a ... older (about 1 in 500 people) who took anticonvulsants such as valproic acid to treat various conditions ...

  11. Amino acids

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/article/002222.htm Amino acids To use the sharing features on this page, please enable JavaScript. Amino acids are organic compounds that combine to form proteins . ...

  12. Obeticholic Acid

    Science.gov (United States)

    Obeticholic acid is used alone or in combination with ursodiol (Actigall, Urso) to treat primary biliary cholangitis (PBC; a ... were not treated successfully with ursodiol alone. Obeticholic acid is in a class of medications called farnesoid ...

  13. Ascorbic Acid

    Science.gov (United States)

    Ascorbic acid is used to prevent and treat scurvy, a disease caused by a lack of vitamin C in ... Ascorbic acid comes in extended-release (long-acting) capsules and tablets, lozenges, syrup, chewable tablets, and liquid drops to ...

  14. Mefenamic Acid

    Science.gov (United States)

    Mefenamic acid is used to relieve mild to moderate pain, including menstrual pain (pain that happens before or during a menstrual period). Mefenamic acid is in a class of medications called NSAIDs. ...

  15. Acid mucopolysaccharides

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/article/003368.htm Acid mucopolysaccharides To use the sharing features on this page, please enable JavaScript. Acid mucopolysaccharides is a test that measures the amount ...

  16. Ethacrynic Acid

    Science.gov (United States)

    Ethacrynic acid, a 'water pill,' is used to treat swelling and fluid retention caused by various medical problems. It ... Ethacrynic acid comes as a tablet to take by mouth. It is usually taken once or twice a day ...

  17. Aminocaproic Acid

    Science.gov (United States)

    Aminocaproic acid is used to control bleeding that occurs when blood clots are broken down too quickly. This type ... the baby is ready to be born). Aminocaproic acid is also used to control bleeding in the ...

  18. Aspartic acid

    Science.gov (United States)

    ... body work. It plays a role in: Hormone production and release Normal nervous system function Plant sources of aspartic acid include: avocado, asparagus, and molasses. Animal sources of aspartic acid include: ...

  19. Exercise-mediated vasodilation in human obesity and metabolic syndrome: effect of acute ascorbic acid infusion

    Science.gov (United States)

    Limberg, Jacqueline K.; Kellawan, J. Mikhail; Harrell, John W.; Johansson, Rebecca E.; Eldridge, Marlowe W.; Proctor, Lester T.; Sebranek, Joshua J.

    2014-01-01

    We tested the hypothesis that infusion of ascorbic acid (AA), a potent antioxidant, would alter vasodilator responses to exercise in human obesity and metabolic syndrome (MetSyn). Forearm blood flow (FBF, Doppler ultrasound) was measured in lean, obese, and MetSyn adults (n = 39, 32 ± 2 yr). A brachial artery catheter was inserted for blood pressure monitoring and local infusion of AA. FBF was measured during dynamic handgrip exercise (15% maximal effort) with and without AA infusion. To account for group differences in blood pressure and forearm size, and to assess vasodilation, forearm vascular conductance (FVC = FBF/mean arterial blood pressure/lean forearm mass) was calculated. We examined the time to achieve steady-state FVC (mean response time, MRT) and the rise in FVC from rest to steady-state exercise (Δ, exercise − rest) before and during acute AA infusion. The MRT (P = 0.26) and steady-state vasodilator responses to exercise (ΔFVC, P = 0.31) were not different between groups. Intra-arterial infusion of AA resulted in a significant increase in plasma total antioxidant capacity (174 ± 37%). AA infusion did not alter MRT or steady-state FVC in any group (P = 0.90 and P = 0.85, respectively). Interestingly, higher levels of C-reactive protein predicted longer MRT (r = 0.52, P < 0.01) and a greater reduction in MRT with AA infusion (r = −0.43, P = 0.02). We concluded that AA infusion during moderate-intensity, rhythmic forearm exercise does not alter the time course or magnitude of exercise-mediated vasodilation in groups of young lean, obese, or MetSyn adults. However, systemic inflammation may limit the MRT to exercise, which can be improved with AA. PMID:25038148

  20. Exercise-mediated vasodilation in human obesity and metabolic syndrome: effect of acute ascorbic acid infusion.

    Science.gov (United States)

    Limberg, Jacqueline K; Kellawan, J Mikhail; Harrell, John W; Johansson, Rebecca E; Eldridge, Marlowe W; Proctor, Lester T; Sebranek, Joshua J; Schrage, William G

    2014-09-15

    We tested the hypothesis that infusion of ascorbic acid (AA), a potent antioxidant, would alter vasodilator responses to exercise in human obesity and metabolic syndrome (MetSyn). Forearm blood flow (FBF, Doppler ultrasound) was measured in lean, obese, and MetSyn adults (n = 39, 32 ± 2 yr). A brachial artery catheter was inserted for blood pressure monitoring and local infusion of AA. FBF was measured during dynamic handgrip exercise (15% maximal effort) with and without AA infusion. To account for group differences in blood pressure and forearm size, and to assess vasodilation, forearm vascular conductance (FVC = FBF/mean arterial blood pressure/lean forearm mass) was calculated. We examined the time to achieve steady-state FVC (mean response time, MRT) and the rise in FVC from rest to steady-state exercise (Δ, exercise - rest) before and during acute AA infusion. The MRT (P = 0.26) and steady-state vasodilator responses to exercise (ΔFVC, P = 0.31) were not different between groups. Intra-arterial infusion of AA resulted in a significant increase in plasma total antioxidant capacity (174 ± 37%). AA infusion did not alter MRT or steady-state FVC in any group (P = 0.90 and P = 0.85, respectively). Interestingly, higher levels of C-reactive protein predicted longer MRT (r = 0.52, P exercise does not alter the time course or magnitude of exercise-mediated vasodilation in groups of young lean, obese, or MetSyn adults. However, systemic inflammation may limit the MRT to exercise, which can be improved with AA. Copyright © 2014 the American Physiological Society.

  1. Fatty acids - trans fatty acids

    Science.gov (United States)

    The data supporting a negative effect of dietary trans fatty acids on cardiovascular disease risk is consistent. The primary dietary sources of trans fatty acids include partially hydrogenated fat and rudiment fat. The adverse effect of trans fatty acids on plasma lipoprotein profiles is consisten...

  2. Extending framework based on the linear coordination polymers: Alternative chains containing lanthanum ion and acrylic acid ligand

    Science.gov (United States)

    Li, Hui; Guo, Ming; Tian, Hong; He, Fei-Yue; Lee, Gene-Hsiang; Peng, Shie-Ming

    2006-11-01

    One-dimensional alternative chains of two lanthanum complexes: [La( L1) 3(CH 3OH)(H 2O) 2]·5H 2O ( L1=anion of α-cyano-4-hydroxycinnamic acid ) 1 and [La( L2) 3(H 2O) 2]·3H 2O ( L2=anion of trans-3-(4-methyl-benzoyl)-acrylic acid) 2 were synthesized and structurally characterized by single-crystal X-ray diffraction, element analysis, IR and thermogravimetric analysis. The crystal structure data are as follows for 1: C 31H 36LaN 3O 17, triclinic, P-1, a=9.8279(4) Å, b=11.8278(5) Å, c=17.8730(7) Å, α=72.7960(10)°, β=83.3820(10)°, γ=67.1650(10)º, Z=2, R1=0.0377, wR2=0.0746; for 2: C 33H 37LaO 14, triclinic, P-1, a=8.7174(5) Å, b=9.9377(5) Å, c=21.153(2) Å, α=81.145(2)°, β=87.591(2)°, γ=67.345(5)°, Z=2, R1=0.0869, wR2=0.220. 1 is a rare example of the alternative chain constructed by syn-syn and anti-syn coordination mode of carboxylato ligand arranged along the chain alternatively. La(III) ions in 2 are linked by two η3-O bridges and four bridges (two η2-O and two η3-O) alternatively. Both of the linear coordination polymers grow into two- and three-dimensional networks by packing through extending hydrogen-bond network directed by ligands.

  3. Self-assembly of carboxylic acid appended naphthalene diimide derivatives with tunable luminescent color and electrical conductivity.

    Science.gov (United States)

    Molla, Mijanur Rahaman; Gehrig, Dominik; Roy, Lisa; Kamm, Valentin; Paul, Ankan; Laquai, Frédéric; Ghosh, Suhrit

    2014-01-13

    Self-assembly of a series of carboxylic acid-functionalized naphthalene diimide (NDI) chromophores with a varying number (n=1-4) of methylene spacers between the NDI ring and the carboxylic acid group has been studied. The derivatives show pronounced aggregation due to the synergistic effects of H-bonding between the carboxylic acid groups in a syn-syn catemer motif and π stacking between the NDI chromophores. Solvent-dependent UV/Vis studies reveal the existence of monomeric dye molecules in a "good" solvent such as chloroform and self-assembly in "bad" solvents such as methylcyclohexane. The propensity of self-assembly is comparable for all samples. Temperature-dependent spectroscopic studies show high thermal stability of the H-bonding-mediated self-assembled structures. In the presence of a protic solvent such as MeOH, self-assembly can be suppressed, suggesting a decisive role of H-bonding, whereas π stacking is more a consequence of than a cause for self-assembly. Syn-syn catemer-type H-bonding is supported by powder XRD studies and the results corroborate well with DFT calculations. The morphology as determined by AFM is found to be dependent on the value of n; with increasing n, the morphology gradually shifts from 2D nanosheets to 1D nanofibers. Emission spectra show sharp emission bands with relatively small Stokes shifts. In addition, a rather broad emission band is observed at longer wavelengths because of the in situ formation of excimer-type species. Due to such a heterogeneous nature, the emission spectrum spans almost the entire red-green-blue region. Depending on the value of n, the ratio of intensities of the two emission bands is changed, which results in a tunable luminescent color. Furthermore, in the case of n=1 and 3, almost pure white light emission is observed. Time-resolved photoluminescence spectra show a very short lifetime (a few picoseconds) of monomeric dye molecules and biexponential decays with longer lifetimes (on the order

  4. Geochemistry, U-Pb geochronology, Sm-Nd and O isotopes of ca. 50 Ma long Ediacaran High-K Syn-Collisional Magmatism in the Pernambuco Alagoas Domain, Borborema Province, NE Brazil

    Science.gov (United States)

    Francisco da Silva Filho, Adejardo; de Pinho Guimarães, Ignez; Santos, Lucilene; Armstrong, Richard; Van Schmus, William Randall

    2016-07-01

    The Pernambuco Alagoas (PEAL) domain shows the major occurrence of granitic batholiths of the Borborema Province, NE Brazil, with Archean to Neoproterozoic range of Nd TDM model ages, giving clues on the role of granites during the Brasiliano orogeny. SHRIMP U/Pb zircon geochronological data for seven granitic intrusions of the PEAL domain divide the studied granitoids into three groups: 1) early-to syn-collision granitoids with crystallization ages ca. 635 Ma (Serra do Catú pluton), 2) syn-collision granitoids with crystallization ages 610-618 Ma (Santana do Ipanema, Água Branca, Mata Grande and Correntes plutons) and 3) late-to post-collision granitoids with ages of ca. 590 Ma (Águas Belas, and Cachoeirinha plutons). The intrusions of group 1 and 2, except the Mata Grande and Correntes plutons, show Nd TDM model ages ranging from 1.2 to 1.5 Ga, while the granitoids from group 3, and Mata Grande Pluton and Correntes plutons have Nd TDM model ages ranging from 1.7 to 2.2 Ga. The studied granitoids with ages plutons, together with the available Nd isotopic data suggest that the Brasiliano orogeny strongly reworked older crust, of either Paleoproterozoic or Tonian ages. The studied granitoids are coeval with calc-alkaline granitoids of the Transversal Zone and Sergipano domains and rare high-K calc-alkaline granitoids from the Transversal Zone domain. Such large volumes of high-K granitoids with crystallization ages older than 600 Ma are not recorded in the Transversal Zone domains, suggesting that at least between 600 and 650 Ma, the granitic magmatism of these two areas were distinct. However, the studied granitoids (630-580 Ma) located in the north part of the PEAL domain, north of the Palmares shear zone are coeval with granitoids of similar geochemical compositions in the Transversal Zone domain. It suggests that the southeastern part of the Transversal Zone and the northern part of the PEAL domains belonged to the same crustal block during the Brasiliano

  5. Folic Acid

    Science.gov (United States)

    ... damage. 10 Do I need folic acid after menopause? Yes. Women who have gone through menopause still need 400 micrograms of folic acid every ... United States: 2003–2006 . American Journal of Clinical Nutrition; 91(1): 231–237. Hamner, H.C., Cogswell, ...

  6. O-Toluic Acid Monomer and Monohydrate: Rotational Spectra, Structures, and Atmospheric Implications

    Science.gov (United States)

    Schnitzler, Elijah G.; Zenchyzen, Brandi L. M.; Jäger, Wolfgang

    2015-06-01

    Clusters of carboxylic acids with water, sulfuric acid, and other atmospheric species potentially increase the rate of new particle formation in the troposphere. Here, we present high-resolution pure rotational spectra of o-toluic acid and its complex with water in the range of 5-14 GHz, measured with a cavity-based molecular beam Fourier-transform microwave spectrometer. In both the monomer and the complex, the carboxylic acid functional group adopts a syn- conformation, with the acidic proton oriented away from the aromatic ring. In the complex, water participates in two hydrogen bonds, forming a six-membered intermolecular ring. Despite its large calculated c-dipole moment, no c-type transitions were observed for the complex, because of a large amplitude "wagging" motion of the unbound hydrogen of water, similar to the case of the benzoic acid-water complex. No methyl internal rotation splittings were observed, consistent with a high barrier (7 kJ mol-1) calculated for the monomer at the B3LYP/6-311++G(d,p) level of theory. Using statistical thermodynamics, experimental rotational constants were combined with a theoretical frequency analysis and binding energy to give an estimate of the percentage of hydrated acid in the atmosphere under various conditions. F. Riccobono, et al., Science, 344, 717 (2014). R. Zhang, et al., Science, 304, 1487 (2004). E. G. Schnitzler and W. Jäger, Phys. Chem. Chem. Phys., 16, 2305 (2014).

  7. Synthesis and Characterization of syn-[(η5-C5Me5)2W2(S)2(μ-S)2]·0.5anti-[(η5-C5Me5)2W2(S)2(μ-S)2

    Institute of Scientific and Technical Information of China (English)

    纪顺俊; 虞虹; 郎建平

    2002-01-01

    The reactions of [PPh4][(η5-C5Me5)WS3] with equimolar Hg2Cl2 in DMF produced syn-[(η5-C5Me5)2W2(S)2(μ-S)2]@0.5anti-[(η5-C5Me5)2W2(S)2(μ-S)2] 1. The structure of 1 was determined by single-crystal X-ray diffraction analysis. 1 crystallizes in the triclinic space group Pī (No. 2) with a = 8.400(2), b = 8.729(2), c = 23.329(8) ?, α = 93.329(8), β = 93.446(2), γ = 96.673(1)°, V = 1725.1(5) ?3, Z = 2, C30H45S6W3, Mr = 1149.60, Dc = 2.213 g/cm3, F(000) = 1086, μ (MoKα) = 10.37 cm-1 and T = 193 K. With the use of 6199 observed reflections (I > 3.0σ(I)), the structure was refined to R = 0.053 and wR = 0.065. 1 consists of one syn-[(η5-C5Me5)2W2(S)2(μ-S)2] and one-half of anti-[(η5-C5Me5)2W2(S)2(μ-S)2]. Both syn- and anti-isomer contain a four-membered W2(μ-S)2 ring. The W-W distances of the syn and anti forms are 2.8973(5) and 2.9113(8) , respectively.

  8. Folic acid

    Science.gov (United States)

    ... taking a specific nutritional supplement, containing vitamin B3 (nicotinamide), a compound isolated from grains (azelaic acid), zinc, ... lung cancer in most people. A type of skin cancer called melanoma. Limited research suggests that taking ...

  9. Folic Acid

    Science.gov (United States)

    ... B-complex vitamin needed by the body to manufacture red blood cells. A deficiency of this vitamin ... prepared from dried yeast, fruit, and fresh leafy green vegetables to increase the folic acid in your ...

  10. Clinical value of serum osteopontin in patients with polycystic ovary syn-drome%多囊卵巢综合征患者血清骨桥蛋白含量测定的临床价值

    Institute of Scientific and Technical Information of China (English)

    李文翠; 张吉才; 谢飞; 高波

    2015-01-01

    目的:探讨测定多囊卵巢综合征(PCOS)患者血清骨桥蛋白(OPN)水平的临床价值。方法选择2012年1月~2014年8月于湖北医药学院附属十堰市太和医院(以下简称“我院”)就诊的PCOS患者54例为研究对象,根据体重指数(BMI)分为肥胖组32例(BMI≥25 kg/m2)和非肥胖组22例(BMI0.05)。结论多囊卵巢综合征患者血清中OPN水平处于升高状态,提示PCOS患者机体处于一种慢性炎性状态,未来可将减缓机体炎性状态作为治疗PCOS患者的策略之一。%Objective To investigate clinical value of serum osteopontin (OPN) in patients with polycystic ovary syn-drome (PCOS). Methods 54 patients with PCOS from January 2012 to August 2014 in the Affiliated Taihe Hospital of Hubei Medical College (“our hospital”for short) were selected as study objects, according to the body mass index (BMI), they were divided into obese group (32 cases, BMI≥25 kg/m2) and non-obese group (22 cases, BMI 0.05). Conclusion Polycystic o-vary syndrome patients are under a state of elevated serum levels of OPN, which may indicate that the PCOS patients maybe in a state of chronic inflammatory, slowing down the body's inflammatory state may become as part of the strate-gy for the treatment of patients with PCOS.

  11. A phase 1 study of a group B meningococcal native outer membrane vesicle vaccine made from a strain with deleted lpxL2 and synX and stable expression of opcA.

    Science.gov (United States)

    Keiser, Paul B; Gibbs, Barnett T; Coster, Trinka S; Moran, E Ellen; Stoddard, Mark B; Labrie, Joseph E; Schmiel, Deborah H; Pinto, Valerian; Chen, Ping; Zollinger, Wendell D

    2010-10-08

    This phase 1 clinical trial assessed the safety and immunogenicity of a native outer membrane vesicle (NOMV) vaccine prepared from a lpxL2(-) synX(-) mutant of strain 44/76 with opcA expression stabilized. Thirty-four volunteers were assigned to one of the three dose groups (25 mcg, 25 mcg with aluminum hydroxide adjuvant, and 50 mcg) to receive three intramuscular injections at 0, 6 and 24 weeks. Specific local and systemic adverse events (AEs) were solicited by diary and at visits on days 1, 2, 7 and 14 after each vaccination and at the end of the study at 30 weeks. Blood chemistries, complete blood count, and coagulation studies were measured on each vaccination day and again two days later. Blood for antibody measurements and bactericidal assays were drawn 0, 14, and 42 days after each vaccination. The proportion of volunteers who developed a fourfold or greater increase in serum bactericidal activity (SBA) to the wild-type parent of the vaccine strain with high opcA expression at 6 weeks after the third dose was 12/26 (0.46, 95% confidence interval 0.27-0.65). Antibody levels to OpcA were significantly higher in vaccine responders than in non-responders (p=0.008), and there was a trend for higher antibody levels to the lipooligosaccharide (LOS) (p=0.059). Bactericidal depletion assays on sera from volunteers with high-titer responses also indicate a major contribution of anti-OpcA and anti-LOS antibodies to the bactericidal response.These results suggest that genetically modified NOMV vaccines can induce protection against group B meningococcus. Copyright © 2010 Elsevier Ltd. All rights reserved.

  12. Ibotenic acid and thioibotenic acid

    DEFF Research Database (Denmark)

    Hermit, Mette B; Greenwood, Jeremy R; Nielsen, Birgitte

    2004-01-01

    with the conformations preferred by the ligands upon docking to mGlu1 and models of the other mGlu subtypes, we propose that unlike other subtypes, group III mGlu receptor binding sites require a ligand conformation at an energy level which is prohibitively expensive for ibotenic acid, but not for thioibotenic acid....... These studies demonstrate how subtle differences in chemical structures can result in profound differences in pharmacological activity....

  13. Effect of An Nao Wan on the Expression of OX42,BDNF and SYN in Rats after Intracerebral Hemorrhage%安脑丸对急性脑出血大鼠OX42、脑源性神经营养因子及突触素表达的影响

    Institute of Scientific and Technical Information of China (English)

    梁慧; 梅元武

    2012-01-01

    Objective: To study the effects of An Nao Wan (ANW) on the expression of OX42,BDNF and SYN in rats after intracerebral hemorrhage. Methods: One hundred and ninety SD rats were randomly divided into normal control group (n=10), sham operated group, model group and ANW treatment group (n = 60 respectively). Experimental intracerebral haematoma was made by injecting Ⅶ type collagenase into the right globus pallidus of rats in the model group and the ANW treatment group. The rats in the ANW treatment group were treated by ANW. Immunohistochemical staining and western blot analysis were employed to detect the expression of OX-42, BDNF and SYN at l2 h,ld,2d,4d,7d or 10 d after the operation. Results: The numbers of OX42 and BDNF positive cells and the expression of BDNF and SYN protein in the model group and the ANW treatment group were increased significantly when compared with those in the normal control group and the sham operated group (P<0. 01). Compared with those in the model group, the number of OX42 positive cells was decreased significantly while the number of BDNF positive cells and the expression of BDNF and SYN protein were increased significantly in the ANW treatment group (P<0. 01). Conclusion: The activation of microglia and the expression of BDNF and SYN were involved in the pathological process of intracerebral hemorrhage. ANW treatment could inhibit the activation of microglia and increase the expression of BDNF and SYN protein after intracerebral hemorrhage.%目的:观察安脑丸对大鼠脑出血后OX42、脑源性神经营养因子(BDNF)及突触素(SYN)表达的影响.方法:SD大鼠190只随机分为正常组10只,假手术组、模型组、安脑丸组各60只;后3组又随机分为造模后12h、1d、2d、4d、7d、10 d共6个时间点,各10只.模型组制作脑出血模型,安脑丸组加用安脑丸灌胃.于各时间点采用免疫组化法及western blot法检测OX42、BDNF及SYN表达情况.结果:模型组及安脑丸组OX42及BDNF

  14. Rapport om DanDiaSyn-projektet

    DEFF Research Database (Denmark)

    Jørgensen, Henrik; Hagedorn, Karen

    2009-01-01

    Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9......Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9...

  15. Rapport om DanDiaSyn-projektet

    DEFF Research Database (Denmark)

    Jørgensen, Henrik; Hagedorn, Karen

    2009-01-01

    Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9......Artiklen gør rede for hovedprincipperne bag det indsamlingsarbejde om dansk dialektsyntaks som forfatterne deltog i 2007-9...

  16. Acid Rain

    Science.gov (United States)

    Bricker, Owen P.; Rice, Karen C.; Dietrich, W.E.; Sposito, Garrison

    1997-01-01

    Acid deposition, or acid rain as it is more commonly referred to, has become a widely publicized environmental issue in the U.S. over the past decade. The term usually conjures up images of fish kills, dying forests, "dead" lakes, and damage to monuments and other historic artifacts. The primary cause of acid deposition is emission of S02 and NOx to the atmosphere during the combustion of fossil fuels. Oxidation of these compounds in the atmosphere forms strong acids - H2SO4 and HNO3 - which are returned to the Earth in rain, snow, fog, cloud water, and as dry deposition.Although acid deposition has only recently been recognized as an environmental problem in the U.S., it is not a new phenomenon (Cogbill & Likens 1974). As early as the middle of the 17th century in England, the deleterious effects of industrial emissions on plants, animals, and humans, and the atmospheric transport of pollutants between England and France had become issues of concern (Evelyn 1661, Graunt 1662). It is interesting that well over three hundred years ago in England, recommendations were made to move industry outside of towns and build higher chimneys to spread the pollution into "distant parts." Increasing the height of smokestacks has helped alleviate local problems, but has exacerbated others. In the U.S. the height of the tallest smokestack has more than doubled, and the average height of smokestacks has tripled since the 1950s (Patrick et al 1981). This trend occurred in most industrialized nations during the 20th century and has had the effect of transforming acid rain from a local urban problem into a problem of global scale.

  17. Stereoselective Michael Addition of Glycine Anions to Chiral Fischer Alkenylcarbene Complexes. Asymmetric Synthesis of beta-Substituted Glutamic Acids.

    Science.gov (United States)

    Ezquerra, Jesús; Pedregal, Concepción; Merino, Isabel; Flórez, Josefa; Barluenga, José; García-Granda, Santiago; Llorca, María-Amparo

    1999-09-03

    The reaction of lithium enolates of achiral N-protected glycine esters with chiral alkoxyalkenylcarbene complexes of chromium provided the corresponding Michael adducts with either high anti or syn selectivity depending on the nature of the nitrogen protecting group, and high diastereofacial selectivity when carbene complexes containing the (-)-8-phenylmenthyloxy group were employed. Subsequent oxidation of the metal-carbene moiety followed by deprotection of the amine group and hydrolysis of both carboxylic esters afforded enantiomerically enriched 3-substituted glutamic acids of natural as well as unnatural stereochemistry. Alternatively, when the deprotection step was performed previously to the oxidation, cyclic aminocarbene complexes were formed, which finally led to optically active 3-substituted pyroglutamic acids.

  18. Perfluorooctanoic acid

    NARCIS (Netherlands)

    de Voogt, P.; Wexler, P.

    2014-01-01

    Perfluorooctanoic acid (PFOA, 335-67-1) is used in fluoropolymer production and firefighting foams and persists in the environment. Human exposure to PFOA is mostly through the diet. PFOA primarily affects the liver and can cause developmental and reproductive toxic effects in test animals.

  19. Transfer/transform relationships in continental rifts and margins and their control on syn- and post-rift denudation: the case of the southeastern Gulf of Aden, Socotra Island, Yemen

    Science.gov (United States)

    Pik, Raphael; Bellahsen, Nicolas; Leroy, Sylvie; Denele, Yoann; Razin, Philippe; Ahmed, Abdulhakim; Khanbari, Khaled

    2013-04-01

    Transfer zones are ubiquist features in continental rifts and margins, as well as transform faults in oceanic lithosphere. Here, we present the structural study of such a structure (the Hadibo Transfer Zone, HTZ) from the southeastern Gulf of Aden, in Socotra Island, Yemen. There, from field data, the HTZ is interpreted as being reactivated, obliquely to divergence, since early rifting stages. Then, from a short review of transfer/transform fault zone geometries worldwide, we derive a classification in terms of relative importance (1st, 2nd, 3rd order), geometry, and location. We suggest that the HTZ is a 1st order transfer fault zone as it controls the initiation of a 1st order oceanic transform fault zone. We then investigate the denudation history of the region surrounding the HTZ in order to highlight the interplay of normal and transfer/transform tectonic structures in the course of rift evolution. Samples belong from two distinct East and West domains of the Socotra Island, separated by the (HTZ). Tectonic denudation started during the Priabonian-Rupelian along flat normal faults and removed all the overlying sedimentary formations, allowing basement exhumation up to the surface (~ 1.2 - 1.6 km of exhumation). Forward t-T modelling of the data requires a slightly earlier date and shorter period for development of rifting in the E-Socotra domain (38 - 34 Ma), compared to the W-Socotra domain (34 - 25 Ma), which suggests that the HTZ was already active at that time. A second major event of basement cooling and exhumation (additional ~ 0.7 - 1 km), starting at about ~ 20 Ma, has only been recorded on the E-Socotra domain. This second denudation phase significantly post-dates local rifting period but appears synchronous with Ocean Continent Transition (OCT: 20 - 17.6 Ma). This late syn-OCT uplift is maximum close to the HTZ, in the wedge of hangingwall delimited by this transfer system and the steep north-dipping normal faults that accommodated the vertical

  20. Two stages of zircon crystallization in the Jingshan monzogranite, Bengbu Uplift: Implications for the syn-collisional granites of the Dabie-Sulu UHP orogenic belt and the climax of movement on the Tan-Lu fault

    Science.gov (United States)

    Wang, X.; Chen, J.; Griffin, W. L.; O'Reilly, S. Y.; Huang, P. Y.; Li, X.

    2011-03-01

    The detailed study of zircon can provide vital clues about the petrogenetic environment of granitoid rocks. Morphological and chemical studies of zircon grains from the Jingshan monzogranite in the Bengbu Uplift (Anhui province, eastern China) identify three phases of growth. Zircon I is brown, translucent, ovoid, and occurs as inherited cores. It shows two groups of 206Pb/ 238U ages, corresponding to the country rock of the Jingshan monzogranite and the basement of the Bengbu Uplift. Zircon II is colorless, transparent and idiomorphic-hypidiomorphic with Ipr = 0.34-0.52, Ipy = 0.03-0.24 and Iel = 0.26-0.34. It shows a very bright CL due to high contents of trace elements (e.g., Y, U and Th), and the oscillatory zoning associated with sector zoning. It contains 1.40-1.66 wt.% HfO 2 with a mean ɛ Hf (t) of - 17.88. These features indicate the igneous crystallization of Zircon II from a peraluminous granite of mainly crustal origin. Based on the field geology, petrography, geochemical analysis, and especially a weighted mean age of 222 Ma for Zircon II, we argue that the Jingshan monzogranite is a syn-collisional granite of the Dabie UHP orogenic belt. This provides new evidence for the northward subduction of the South China Block beneath the North China Block just before 222 Ma, and allows quantitative estimates of the rate of post-UHP exhumation in the Dabie orogenic belt. Zircon III is also colorless and transparent, but is totally idiomorphic with Ipr = 0.41-1.00, Ipy = 0.88-1.00 and Iel = 0.39-0.83. It occurs only as overgrowths on Zircon II, and shows weak CL due to its depletion in trace elements. Zircon III has widely variable contents of HfO 2 (1.12 to 3.01 wt.%) and Hf-isotope compositions very similar to those of Zircon II. These features suggest crystallization of Zircon III from small volumes of leucosome, probably in the beginning stages of migmatisation. Zircon III has a weighted mean age of 156 Ma, interpreted as representing the climax of movement

  1. Volcano-sedimentary characteristics in the Abu Treifiya Basin, Cairo-Suez District, Egypt: Example of dynamics and fluidization over sedimentary and volcaniclastic beds by emplacement of syn-volcanic basaltic rocks

    Science.gov (United States)

    Khalaf, E. A.; Abdel Motelib, A.; Hammed, M. S.; El Manawi, A. H.

    2015-12-01

    temperature, confining pressure, sediment fluidization, and vapor film at the magma-sediment interactions. Peperites in the study area record deposition within a shallow marine and fluvio-lacustrine environment accumulated in a rift-related basin developed during pre- to syn-rift phase, respectively. The facies transitions (peperites) in this area resulted from the explosive and sediment depositional processes, which were mingled separately by volcanism under contrast geological conditions. The development of such contrast in the depositional sequences reflects variation in the accommodation to sediment supply in the same accumulation space inside the depocenters during the rifting of the Abu Treifiya Basin. Hydrothermal mineralizations comprising quartz and carbonate are restricted to peperites and lava flows.

  2. ACS 患者超敏-CRP 和 SYNTAX 积分的相关性研究%Correlation between high sensitive CRP level and SYNTAX score in patients with acute coronary syn-drome

    Institute of Scientific and Technical Information of China (English)

    王黎; 任品芳; 沈剑耀

    2016-01-01

    目的:探讨超敏-CRP (hs-CRP)和SYNTAX积分所反映的ACS患者冠状动脉病变范围和严重程度的关系。方法选取 ACS 患者218例,根据 SYNTAX 积分将其分为低分组152例(1~22分)和中高分组66例(≥23分),对患者的一般临床特征、hs-CRP 等血液指标、冠状动脉造影特征等和 SYNTAX 积分的关系进行分析。结果ACS 患者中高分组的 hs-CRP 水平[(13.2±3.3)mg/L]高于低分组患者[(10.4±3.9)mg/L,P <0.05]。中高分组的年龄、血糖、血清肌酐、总胆固醇、LDL、CK-MB、心肌肌钙蛋白 T 均高于低分组(P 均<0.05),而中高分组的 LVEF 为(43.7±3.9)%,低于低分组的(53.7±6.8)%,2组比较差异有统计学意义(P <0.05)。Logistic 回归显示hs-CRP、年龄、LVEF、ST 段抬高型心肌梗死、LDL、慢性完全闭塞性病变是 SYNTAX 中高分组的独立预测因子。结论hs-CRP 是 SYNTAX 积分所反映的 ACS 患者冠状动脉病变范围和严重程度的独立预测因子。%Objective To explore the relationship between high sensitive CRP (hs-CRP)and the ex-tent and severity of coronary artery disease in patients with ACS reflected by SYNTAX score.Methods 218 cases of patients with ACS were selected.According to the SYNTAX score,the patients were divided into low SYNTAX score group (1-22 scores)including 152 cases of patients and intermediate-high SYNTAX score group (≥23 scores)including 66 cases of patients.The relationship between the clinic characteristics,blood biochemical parameters such as hs-CRP etc.coronary angiography features,etc.and SYNTAX score were ana-lyzed.Results hs-CRP levels in intermediate-high SYNTAX score group were higher than those in low SYN-TAX score group (13.2 ±3.3 mg/L vs.10.4 ±3.9 mg/L,P <0.05).At the same time,the age of pa-tients,blood glucose,serum creatinine,total cholesterol,LDL,CK-MB,cTnT in the intermediate-high SYN-TAX score group were

  3. Hydroxycarboxylic acids and salts

    Energy Technology Data Exchange (ETDEWEB)

    Kiely, Donald E; Hash, Kirk R; Kramer-Presta, Kylie; Smith, Tyler N

    2015-02-24

    Compositions which inhibit corrosion and alter the physical properties of concrete (admixtures) are prepared from salt mixtures of hydroxycarboxylic acids, carboxylic acids, and nitric acid. The salt mixtures are prepared by neutralizing acid product mixtures from the oxidation of polyols using nitric acid and oxygen as the oxidizing agents. Nitric acid is removed from the hydroxycarboxylic acids by evaporation and diffusion dialysis.

  4. Poly(2-thiophen-3-yl-malonic acid), a polythiophene with two carboxylic acids per repeating unit.

    Science.gov (United States)

    Bertran, Oscar; Armelin, Elaine; Estrany, Francesc; Gomes, Alex; Torras, Juan; Alemán, Carlos

    2010-05-20

    A new substituted polythiophene derivative bearing malonic acid, poly(2-thiophen-3-yl-malonic acid), has been prepared and characterized using a strategy that combines both experimental and theoretical methodologies. The chemical structure of this material has been investigated using FTIR and (1)H NMR, and its molecular conformation has been determined using quantum mechanical calculations. Interestingly, the arrangement of the inter-ring dihedral angles was found to depend on the ionization degree of the material, that is, on the pH, which has been found completely soluble in aqueous base solution. Thus, the preferred anti-gauche conformation changes to syn-gauche when the negatively charged carboxylate groups transforms into neutral carboxylic acid. UV-vis experiments and quantum mechanical calculations on model systems with a head-to-tail regiochemistry showed that the lowest pi-pi* transition energy is 2.25 and 2.39 eV for the negatively charged and the neutral polymer, respectively. These values are slightly larger than those previously reported for other polythiophenes with bulky polar side groups. The polymer presents a good thermal stability with a decomposition temperature above 215 degrees C and an electrical conductivity of 10(-5) S/cm, which is characteristic of semiconductor materials. Scanning electron microscopy micrographs showed that, after doping, the surface of this material displays regular distribution pores with irregular sizes. This surface suggests that poly(2-thiophen-3-yl-malonic acid) is a candidate for potential applications such as selective membranes for electrodialysis, wastewater treatment, or ion-selective membranes for biomedical uses.

  5. Hydrofluoric acid poisoning

    Science.gov (United States)

    Fluorhydric acid ... stomach, or intestine have holes (perforations) from the acid. ... Hydrofluoric acid is especially dangerous. The most common accidents involving hydrofluoric acid cause severe burns on the skin ...

  6. Dehydroabietic acid

    Directory of Open Access Journals (Sweden)

    Xiao-Ping Rao

    2009-10-01

    Full Text Available The title compound [systematic name: (1R,4aS,10aR-7-isopropyl-1,4a-dimethyl-1,2,3,4,4a,9,10,10a-octahydrophenanthrene-1-carboxylic acid], C20H28O2, has been isolated from disproportionated rosin which is obtained by isomerizing gum rosin with a Pd-C catalyst.. Two crystallographically independent molecules exist in the asymmetric unit. In each molecule, there are three six-membered rings, which adopt planar, half-chair and chair conformations. The two cyclohexane rings form a trans ring junction with the two methyl groups in axial positions. The crystal structure is stabilized by intermolecular O—H...O hydrogen bonds.

  7. SYN TAX 及 SYN TAX Ⅱ评分的研究进展

    Institute of Scientific and Technical Information of China (English)

    王丽媛(综述); 韩雅君(审校)

    2015-01-01

    冠状动脉血运重建是冠心病的有效治疗手段,对于左主干及复杂血管病变的冠心病患者,如何选择血运重建策略目前仍存在争议。SYNTAX评分经过5年临床实践证明是评价预后较好的工具,但仅限于冠状动脉解剖评价,具有临床局限性。SYNTAX Ⅱ评分将SYNTAX评分及临床相关危险因素包含在内,自2013年提出后,近年来国外大规模临床实验研究进一步证实了SYNTAX Ⅱ评分是评价预后的良好工具,也在现实世界中为患者血运重建策略的选择提供了依据。

  8. Amino acids in the sedimentary humic and fulvic acids

    Digital Repository Service at National Institute of Oceanography (India)

    Sardessai, S.

    to the coastal sedimentary humic acids implying higher association of amino acids with the carbonaceous and fine grained sedimentary humic acids. Both the humic and fulvic acids are composed of neutral, acidic, basic, aromatic and sulphur containing amino acids....

  9. Anesthesia effects of the syn-form atracurii besilas by target controlled infusion on laparoscopic cholecystectomy%靶控输注顺式苯磺酸阿曲库铵在腹腔镜胆囊切除手术中的麻醉效果

    Institute of Scientific and Technical Information of China (English)

    周冠同; 温清娴; 陈新妹; 李金波; 李银妹

    2012-01-01

    目的 探讨靶控输注顺式苯磺酸阿曲库铵在腹腔镜胆囊切除手术中的临床麻醉效果.方法 选择行腹腔镜胆囊切除术的患者52例,均按美国麻醉师协会分级(ASA)Ⅰ~Ⅱ级,采用全凭静脉麻醉,患者意识丧失后给予靶控输注顺式苯磺酸阿曲库铵,并观察其肌肉松弛效果、血流动力学的变化、气管插管情况.结果 所有患者在抑制达到100%时,完成气管插管;术中血流动力学稳定,所有患者未见皮肤潮红和支气管痉挛的症状.结论 靶控输注顺式苯磺酸阿曲库铵在腹腔镜胆囊切除手术中,不但可以提供满意的插管条件,肌肉松弛恢复时间也快,且对血流动力学无明显的影响.%Objective To discuss the anesthesia effects of the syn-form atracurii besilas by target controlled infusion on laparoscopic cholecystectomy. Methods 52 patients undergoing elective laparoscopic cholecystectomy were chosen, and all were graded for Ⅰ to Ⅱ grade according to the American Association of Anesthetists (ASA), using the total intravenous anesthesia, when all the patients had no consciousness, and began to use the target controlled infusion to the syn-form a-tracurii besilas, the effects of the muscular relaxation, the change of the hemodynamics, trachea cannula circs were observed. Results When all the patients were bated to achieve 100%, and then finished the trachea cannula, the change of the hemodynamics was stabilization, no patients had the erubescence and bronchial spasm was no change. Conclusion In laparoscopic cholecystectomy, the syn-form atracurii besilas by target controlled infusion can afford the satisfactory trachea cannula condition. The comeback of the muscular relaxation is rapidness, and no influence on the hemodynamics.

  10. [Teichoic acids from lactic acid bacteria].

    Science.gov (United States)

    Livins'ka, O P; Harmasheva, I L; Kovalenko, N K

    2012-01-01

    The current view of the structural diversity of teichoic acids and their involvement in the biological activity of lactobacilli has been reviewed. The mechanisms of effects of probiotic lactic acid bacteria, in particular adhesive and immunostimulating functions have been described. The prospects of the use of structure data of teichoic acid in the assessment of intraspecific diversity of lactic acid bacteria have been also reflected.

  11. Plasma amino acids

    Science.gov (United States)

    Amino acids blood test ... types of methods used to determine the individual amino acid levels in the blood. ... test is done to measure the level of amino acids in the blood. An increased level of a ...

  12. Uric acid test (image)

    Science.gov (United States)

    Uric acid urine test is performed to check for the amount of uric acid in urine. Urine is collected over a 24 ... testing. The most common reason for measuring uric acid levels is in the diagnosis or treatment of ...

  13. POLYELEOSTEARIC ACID VESICLES

    Institute of Scientific and Technical Information of China (English)

    LI Zichen; XIE Ximng; FAN Qinghua; FANG Yifei

    1992-01-01

    α-Eleostearic acid and β-eleostearic acid formed vesicles in aqueous medium when an ethanol solutionofeleostearic acid was injected rapidly into a vigorously vortexed aqueous phase. Formation of the vesicles was demonstrated by electron microscopic observation and bromothymol blue encapsulation experiments. Polymerizations of the eleostearic acids in the formed vesicles carried out by UV irradiation produced poly-α-eleostearic acid and poly-β-eleostearic acid vesicles.

  14. Acid distribution in phosphoric acid fuel cells

    Energy Technology Data Exchange (ETDEWEB)

    Okae, I.; Seya, A.; Umemoto, M. [Fuji Electric Co., Ltd., Chiba (Japan)

    1996-12-31

    Electrolyte acid distribution among each component of a cell is determined by capillary force when the cell is not in operation, but the distribution under the current load conditions had not been clear so far. Since the loss of electrolyte acid during operation is inevitable, it is necessary to store enough amount of acid in every cell. But it must be under the level of which the acid disturbs the diffusion of reactive gases. Accordingly to know the actual acid distribution during operation in a cell is very important. In this report, we carried out experiments to clarify the distribution using small single cells.

  15. Gas-phase Acidities of Aspartic Acid, Glutamic Acid, and their Amino Acid Amides.

    Energy Technology Data Exchange (ETDEWEB)

    Li, Zhong; Matus, Myrna H; Velazquez, Hector A; Dixon, David A; Cassady, Carolyn J

    2007-02-14

    Gas-phase acidities (GA or ΔGacid) for the two most acidic common amino acids, aspartic acid and glutamic acid, have been determined for the first time. Because of the amide linkage’s importance in peptides and as an aid in studying side chain versus main chain deprotonation, aspartic acid amide and glutamic acid amide were also studied. Experimental GA values were measured by proton transfer reactions in an electrospray ionization/Fourier transform ion cyclotron resonance mass spectrometer. Calculated GAs were obtained by density functional and molecular orbital theory approaches. The best agreement with experiment was found at the G3MP2 level; the MP2/CBS and B3LYP/aug-cc-pVDZ results are 3–4 kcal/mol more acidic than the G3MP2 results. Experiment shows that aspartic acid is more acidic than glutamic acid by ca. 3 kcal/mol whereas the G3MP2 results show a smaller acidity difference of 0.2 kcal/mol. Similarly, aspartic acid amide is experimentally observed to be ca. 2 kcal/mol more acidic than glutamic acid amide whereas the G3MP2 results show a correspondingly smaller energy difference of 0.7 kcal/mol. The computational results clearly show that the anions are all ring-like structures with strong hydrogen bonds between the OH or NH2 groups and the CO2- group from which the proton is removed. The two amino acids are main-chain deprotonated. In addition, use of the COSMO model for the prediction of the free energy differences in aqueous solution gave values in excellent agreement with the most recent experimental values for pKa. Glutamic acid is predicted to be more acidic than aspartic acid in aqueous solution due to differential solvation effects.

  16. Recognition of nucleoside monophosphate substrates by Haemophilus influenzae class C acid phosphatase.

    Science.gov (United States)

    Singh, Harkewal; Schuermann, Jonathan P; Reilly, Thomas J; Calcutt, Michael J; Tanner, John J

    2010-12-10

    The e (P4) phosphatase from Haemophilus influenzae functions in a vestigial NAD(+) utilization pathway by dephosphorylating nicotinamide mononucleotide to nicotinamide riboside. P4 is also the prototype of class C acid phosphatases (CCAPs), which are nonspecific 5',3'-nucleotidases localized to the bacterial outer membrane. To understand substrate recognition by P4 and other class C phosphatases, we have determined the crystal structures of a substrate-trapping mutant P4 enzyme complexed with nicotinamide mononucleotide, 5'-AMP, 3'-AMP, and 2'-AMP. The structures reveal an anchor-shaped substrate-binding cavity comprising a conserved hydrophobic box that clamps the nucleotide base, a buried phosphoryl binding site, and three solvent-filled pockets that contact the ribose and the hydrogen-bonding edge of the base. The span between the hydrophobic box and the phosphoryl site is optimal for recognizing nucleoside monophosphates, explaining the general preference for this class of substrate. The base makes no hydrogen bonds with the enzyme, consistent with an observed lack of base specificity. Two solvent-filled pockets flanking the ribose are key to the dual recognition of 5'-nucleotides and 3'-nucleotides. These pockets minimize the enzyme's direct interactions with the ribose and provide sufficient space to accommodate 5' substrates in an anti conformation and 3' substrates in a syn conformation. Finally, the structures suggest that class B acid phosphatases and CCAPs share a common strategy for nucleotide recognition.

  17. Folic acid: nutritional biochemistry, molecular biology, and role in disease processes.

    Science.gov (United States)

    Lucock, M

    2000-01-01

    This paper reviews the chemistry, metabolism, and molecular biology of folic acid, with a particular emphasis on how it is, or may be, involved in many disease processes. Folic acid prevents neural tube defects like spina bifida, while its ability to lower homocysteine suggests it might have a positive influence on cardiovascular disease. A role for this B vitamin in maintaining good health may, in fact, extend beyond these clinical conditions to encompass other birth defects, several types of cancer, dementia, affective disorders, Down's syndrome, and serious conditions affecting pregnancy outcome. The effect of folate in these conditions can be explained largely within the context of folate-dependent pathways leading to methionine and nucleotide biosynthesis, and genetic variability resulting from a number of common polymorphisms of folate-dependent enzymes involved in the homocysteine remethylation cycle. Allelic variants of folate genes that have a high frequency in the population, and that may play a role in disease formation include 677C --> T-MTHFR, 1298A --> C-MTHFR, 2756A --> G-MetSyn, and 66A --> G-MSR. Future work will probably uncover further polymorphisms of folate metabolism, and lead to a wider understanding of the interaction between this essential nutrient and the many genes which underpin its enzymatic utilization in a plethora of critical biosynthetic reactions, and which, under adverse nutritional conditions, may promote disease.

  18. Gas-phase acidities of aspartic acid, glutamic acid, and their amino acid amides

    Science.gov (United States)

    Li, Zhong; Matus, Myrna H.; Velazquez, Hector Adam; Dixon, David A.; Cassady, Carolyn J.

    2007-09-01

    Gas-phase acidities (GA or [Delta]Gacid) for the two most acidic common amino acids, aspartic acid and glutamic acid, have been determined for the first time. Because of the amide linkage's importance in peptides and as an aid in studying side chain versus main chain deprotonation, aspartic acid amide and glutamic acid amide were also studied. Experimental GA values were measured by proton transfer reactions in an electrospray ionization/Fourier transform ion cyclotron resonance mass spectrometer. Calculated GAs were obtained by density functional and molecular orbital theory approaches. The best agreement with experiment was found at the G3MP2 level; the MP2/CBS and B3LYP/aug-cc-pVDZ results are 3-4 kcal/mol more acidic than the G3MP2 results. Experiment shows that aspartic acid is more acidic than glutamic acid by ca. 3 kcal/mol whereas the G3MP2 results show a smaller acidity difference of 0.2 kcal/mol. Similarly, aspartic acid amide is experimentally observed to be ca. 2 kcal/mol more acidic than glutamic acid amide whereas the G3MP2 results show a correspondingly smaller energy difference of 0.7 kcal/mol. The computational results clearly show that the anions are all ring-like structures with strong hydrogen bonds between the OH or NH2 groups and the CO2- group from which the proton is removed. The two amino acids are main-chain deprotonated. In addition, use of the COSMO model for the prediction of the free energy differences in aqueous solution gave values in excellent agreement with the most recent experimental values for pKa. Glutamic acid is predicted to be more acidic than aspartic acid in aqueous solution due to differential solvation effects.

  19. Toxicity of adipic acid.

    Science.gov (United States)

    Kennedy, Gerald L

    2002-05-01

    Adipic acid has very low acute toxicity in rats with an LD50 > 5000 mg/kg. Adipic acid produced mild to no skin irritation on intact guinea pig skin as a 50% concentration in propylene glycol; it was not a skin sensitizer. Adipic acid caused mild conjunctival irritation in washed rabbit eyes; in unwashed rabbit eyes, there was mild conjunctival irritation, minimal iritis, but no corneal effects. Adipic acid dust may irritate the mucous membranes of the lungs and nose. In a 2-year feeding study, rats fed adipic acid at concentrations up to 5% in the diet exhibited only weight loss. Adipic acid is not genetically active in a wide variety of assay systems. Adipic acid caused no developmental toxicity in mice, rats, rabbits, or hamsters when administered orally. Adipic acid is partially metabolized in humans; the balance is eliminated unchanged in the urine. Adipic acid is slightly to moderately toxic to fish, daphnia, and algae in acute tests.

  20. Enantiospecific total synthesis of (+)-tanikolide via a key [2,3]-Meisenheimer rearrangement with an allylic amine N-oxide-directed epoxidation and a one-pot trichloroisocyanuric acid N-debenzylation and N-chlorination.

    Science.gov (United States)

    Xie, Yangla; Sun, Moran; Zhou, Hang; Cao, Qiwei; Gao, Kaige; Niu, Changling; Yang, Hua

    2013-10-18

    The enantiospecific total synthesis of the δ-lactonic marine natural product (+)-tanikolide (1), isolated from Lyngbya majuscula , was achieved using a [2,3]-Meisenheimer rearrangement as the key reaction. During this rearrangement, we discovered that the allylic amine N-oxide could direct the m-CPBA double-bond epoxidation to the syn position. The resulting syn product 8 underwent epoxide ring opening under the m-CBA conditions to give the five- and six-membered cyclic ether amine N-oxides, which we further treated with Zn and conc. HCl to obtain the reduced bisbenzyl tertiary amines 23 and 22, respectively. When 23 and 22 were treated with trichloroisocyanuric acid (TCCA) in dichloromethane, oxidation at the benzyl position occurred, forming iminium ions. These intermediates were trapped by intramolecular reaction with the hydroxyls, and the resulting intermediates were then oxidized or shifted to afford 25 and 24, respectively. The entire one-pot process involves N-debenzylation, N-chlorination, and hemiacetal oxidation. The amine N-oxide-directed epoxidation complements Davies' ammonium-directed epoxidation. Thus, TCCA N-debenzylation is described for the first time and might be a useful N-debenzylation technique.

  1. Acid Thunder: Acid Rain and Ancient Mesoamerica

    Science.gov (United States)

    Kahl, Jonathan D. W.; Berg, Craig A.

    2006-01-01

    Much of Mesoamerica's rich cultural heritage is slowly eroding because of acid rain. Just as water dissolves an Alka-Seltzer tablet, acid rain erodes the limestone surfaces of Mexican archaeological sites at a rate of about one-half millimeter per century (Bravo et al. 2003). A half-millimeter may not seem like much, but at this pace, a few…

  2. Acid Thunder: Acid Rain and Ancient Mesoamerica

    Science.gov (United States)

    Kahl, Jonathan D. W.; Berg, Craig A.

    2006-01-01

    Much of Mesoamerica's rich cultural heritage is slowly eroding because of acid rain. Just as water dissolves an Alka-Seltzer tablet, acid rain erodes the limestone surfaces of Mexican archaeological sites at a rate of about one-half millimeter per century (Bravo et al. 2003). A half-millimeter may not seem like much, but at this pace, a few…

  3. Synthesis, Crystal Structures and Catalysis of Dinuclear Cd(Ⅱ) Complexes Bridged by Unusual (N,O,O')-Coordinated a-Amino Acids

    Institute of Scientific and Technical Information of China (English)

    DENG Dong-sheng; WANG Li; PEI Ya-mei; FENG Lu; LIU Chang-lin

    2012-01-01

    Four dinuclear amino acid cadmium(Ⅱ) complexes [Cd2(tren)2(dl-alaninato)](ClO4)3·H2O(Ⅰ),[Cd2(tren)2·(l-alaninato)](ClO4)3·H2O(Ⅱ),[Cd2(tren)2(dl-phenylalaninato)](ClO4)3(Ⅲ) and [Cd2(tren)2(l-phenylalaninato)]·(ClO4)3(Ⅳ),constructed from mixed ligands of tris(2-aminoethyl)amine(tren) and racemic or natural amino acids(amino acids=dl- or l-alanine,and dl- or l-phenylalanine),have been synthesized and characterized by X-ray crystallography.The structural analysis of complexes Ⅰ and Ⅲ reveals that the cadmium centers are coordinated by one tren ligand and one amino acid molecule with the unusual (N,O,O')-bridged mode,resulting in asymmetric chromophores of CdN4O and CdN5O in complex Ⅰ,CdN4O2 and CdN5O in complex Ⅲ,respectively.The utility of the four complexes as efficient water-compatible Lewis acid catalysts for the direct aldol reaction in water was examined.The reaction proceeded smoothly to afford the corresponding β-hydroxy ketones in up to 99% yield.Moreover,the diastereoselectivity of the reaction favors the formation of the syn-isomers.

  4. Synthesis of screening substrates for the directed evolution of sialic acid aldolase: towards tailored enzymes for the preparation of influenza A sialidase inhibitor analogues.

    Science.gov (United States)

    Woodhall, Thomas; Williams, Gavin; Berry, Alan; Nelson, Adam

    2005-05-01

    The stereoselective synthesis of two epimeric screening substrates, (4R, 5R, 6R)- and (4S, 5R, 6R)-6-dipropylcarbamoyl-2-oxo-4,5,6-trihydroxy-hexanoic acid, for the directed evolution of sialic acid aldolase is described. The complementary methods relied on stereoselective indium-mediated additions of ethyl alpha-bromomethyl acrylate to functionalised aldehydes. With an alpha-hydroxy aldehyde, (2R, 3R)-2,3-dihydroxy-4-oxo butanoic acid dipropylamide, the addition was chelation controlled, and the syn product, (6R, 5R, 4S)-6-dipropylcarbamoyl-2-methylidene-4,5,6-trihydroxy-hexanoic acid ethyl ester, was obtained. In contrast, the stereochemical outcome of the addition to (2R, 3R)-N,N-dipropyl-2,3-O-isopropylidene-4-oxobutyramide was consistent with Felkin-Anh control, and the anti adduct, (4R, 5R, 6R)-6-dipropylcarbamoyl-2-methylidene-4-hydroxy-5,6-O-isopropylidene-hexanoic acid ethyl ester, was the major product. Ozonolysis and deprotection gave the screening substrates as mixtures of furanose and pyranose forms, in good yields.

  5. Omega-3 Fatty Acids

    Science.gov (United States)

    Omega-3 fatty acids are used together with lifestyle changes (diet, weight-loss, exercise) to reduce the ... the blood in people with very high triglycerides. Omega-3 fatty acids are in a class of ...

  6. Omega-6 Fatty Acids

    Science.gov (United States)

    Omega-6 fatty acids are types of fats. Some types are found in vegetable oils, including corn, evening primrose seed, safflower, and soybean oils. Other types of omega-6 fatty acids are found in black currant ...

  7. Lactic acid test

    Science.gov (United States)

    ... this page: //medlineplus.gov/ency/article/003507.htm Lactic acid test To use the sharing features on this page, please enable JavaScript. Lactic acid is mainly produced in muscle cells and red ...

  8. Catalytic Synthesis Lactobionic Acid

    Directory of Open Access Journals (Sweden)

    V.G. Borodina

    2014-07-01

    Full Text Available Gold nanoparticles are obtained, characterized and deposited on the carrier. Conducted catalytic synthesis of lactobionic acid from lactose. Received lactobionic acid identify on the IR spectrum.

  9. Amino Acid Metabolism Disorders

    Science.gov (United States)

    ... this process. One group of these disorders is amino acid metabolism disorders. They include phenylketonuria (PKU) and maple syrup urine disease. Amino acids are "building blocks" that join together to form ...

  10. Facts about Folic Acid

    Science.gov (United States)

    ... Partners About Us Information For… Media Policy Makers Facts About Folic Acid Language: English (US) Español ( ... a woman needs 400 micrograms (mcg) every day. Facts About Folic Acid Download and print this fact ...

  11. Azelaic Acid Topical

    Science.gov (United States)

    Azelaic acid gel and foam is used to clear the bumps, lesions, and swelling caused by rosacea (a skin ... redness, flushing, and pimples on the face). Azelaic acid cream is used to treat the pimples and ...

  12. Folic Acid Quiz

    Science.gov (United States)

    ... About Us Information For… Media Policy Makers Folic Acid Quiz Language: English (US) Español (Spanish) Recommend ... button beside the question. Good Luck! 1. Folic acid is: A a B vitamin B a form ...

  13. N-(2-Chloro-5-methyl-phen-yl)succinamic acid.

    Science.gov (United States)

    Gowda, B Thimme; Foro, Sabine; Chaithanya, U

    2012-01-01

    In the title compound, C(11)H(12)ClNO(3), the conformation of the N-H bond in the amide segment is syn with respect to the ortho-Cl atom. The amide and carboxyl C=O groups are syn to each other. Furthermore, the C=O and O-H bonds of the carboxyl group are in syn positions with respect to each other. The dihedral angle between the benzene ring and the amide group is 47.8 (2)°. In the crystal, mol-ecules are connected by pairs of O-H⋯O hydrogen bonds, forming inversion dimers. The dimers are further linked by N-H⋯O hydrogen bonds into double chains along the b-axis direction.

  14. Immunoglobulin and fatty acids

    DEFF Research Database (Denmark)

    2009-01-01

    The present invention relates to a composition comprising 0.1-10 w/w % immunoglobulin (Ig), 4-14 w/w % saturated fatty acids, 4-14 w/w % mono-unsaturated fatty acids and 0-5 w/w % poly-unsaturated fatty acids, wherein the weight percentages are based on the content of dry matter in the composition...

  15. The Acid Rain Reader.

    Science.gov (United States)

    Stubbs, Harriett S.; And Others

    A topic which is often not sufficiently dealt with in elementary school textbooks is acid rain. This student text is designed to supplement classroom materials on the topic. Discussed are: (1) "Rain"; (2) "Water Cycle"; (3) "Fossil Fuels"; (4) "Air Pollution"; (5) "Superstacks"; (6) "Acid/Neutral/Bases"; (7) "pH Scale"; (8) "Acid Rain"; (9)…

  16. Stomach acid test

    Science.gov (United States)

    Gastric acid secretion test ... of the cells in the stomach to release acid. The stomach contents are then removed and analyzed. ... 3.5). These numbers are converted to actual acid production in units of milliequivalents per hour (mEq/ ...

  17. Acid Lipase Disease

    Science.gov (United States)

    ... Page You are here Home » Disorders » All Disorders Acid Lipase Disease Information Page Acid Lipase Disease Information Page What research is being ... research to understand lipid storage diseases such as acid lipase deficiency. Additional research studies hope to identify ...

  18. Acid Rain Study Guide.

    Science.gov (United States)

    Hunger, Carolyn; And Others

    Acid rain is a complex, worldwide environmental problem. This study guide is intended to aid teachers of grades 4-12 to help their students understand what acid rain is, why it is a problem, and what possible solutions exist. The document contains specific sections on: (1) the various terms used in conjunction with acid rain (such as acid…

  19. The Acid Rain Reader.

    Science.gov (United States)

    Stubbs, Harriett S.; And Others

    A topic which is often not sufficiently dealt with in elementary school textbooks is acid rain. This student text is designed to supplement classroom materials on the topic. Discussed are: (1) "Rain"; (2) "Water Cycle"; (3) "Fossil Fuels"; (4) "Air Pollution"; (5) "Superstacks"; (6) "Acid/Neutral/Bases"; (7) "pH Scale"; (8) "Acid Rain"; (9)…

  20. Demospongic Acids Revisited

    Directory of Open Access Journals (Sweden)

    Gilles Barnathan

    2010-10-01

    Full Text Available The well-known fatty acids with a D5,9 unsaturation system were designated for a long period as demospongic acids, taking into account that they originally occurred in marine Demospongia sponges. However, such acids have also been observed in various marine sources with a large range of chain-lengths (C16–C32 and from some terrestrial plants with short acyl chains (C18–C19. Finally, the D5,9 fatty acids appear to be a particular type of non-methylene-interrupted fatty acids (NMA FAs. This article reviews the occurrence of these particular fatty acids in marine and terrestrial organisms and shows the biosynthetic connections between D5,9 fatty acids and other NMI FAs.

  1. Acidic Ionic Liquids.

    Science.gov (United States)

    Amarasekara, Ananda S

    2016-05-25

    Ionic liquid with acidic properties is an important branch in the wide ionic liquid field and the aim of this article is to cover all aspects of these acidic ionic liquids, especially focusing on the developments in the last four years. The structural diversity and synthesis of acidic ionic liquids are discussed in the introduction sections of this review. In addition, an unambiguous classification system for various types of acidic ionic liquids is presented in the introduction. The physical properties including acidity, thermo-physical properties, ionic conductivity, spectroscopy, and computational studies on acidic ionic liquids are covered in the next sections. The final section provides a comprehensive review on applications of acidic ionic liquids in a wide array of fields including catalysis, CO2 fixation, ionogel, electrolyte, fuel-cell, membrane, biomass processing, biodiesel synthesis, desulfurization of gasoline/diesel, metal processing, and metal electrodeposition.

  2. [Biosynthesis of adipic acid].

    Science.gov (United States)

    Han, Li; Chen, Wujiu; Yuan, Fei; Zhang, Yuanyuan; Wang, Qinhong; Ma, Yanhe

    2013-10-01

    Adipic acid is a six-carbon dicarboxylic acid, mainly for the production of polymers such as nylon, chemical fiber and engineering plastics. Its annual demand is close to 3 million tons worldwide. Currently, the industrial production of adipic acid is based on the oxidation of aromatics from non-renewable petroleum resources by chemo-catalytic processes. It is heavily polluted and unsustainable, and the possible alternative method for adipic acid production should be developed. In the past years, with the development of synthetic biology and metabolic engineering, green and clean biotechnological methods for adipic acid production attracted more attention. In this study, the research advances of adipic acid and its precursor production are reviewed, followed by addressing the perspective of the possible new pathways for adipic acid production.

  3. Boric acid and boronic acids inhibition of pigeonpea urease.

    Science.gov (United States)

    Reddy, K Ravi Charan; Kayastha, Arvind M

    2006-08-01

    Urease from the seeds of pigeonpea was competitively inhibited by boric acid, butylboronic acid, phenylboronic acid, and 4-bromophenylboronic acid; 4-bromophenylboronic acid being the strongest inhibitor, followed by boric acid > butylboronic acid > phenylboronic acid, respectively. Urease inhibition by boric acid is maximal at acidic pH (5.0) and minimal at alkaline pH (10.0), i.e., the trigonal planar B(OH)3 form is a more effective inhibitor than the tetrahedral B(OH)4 -anionic form. Similarly, the anionic form of phenylboronic acid was least inhibiting in nature.

  4. Acid-Base Homeostasis.

    Science.gov (United States)

    Hamm, L Lee; Nakhoul, Nazih; Hering-Smith, Kathleen S

    2015-12-07

    Acid-base homeostasis and pH regulation are critical for both normal physiology and cell metabolism and function. The importance of this regulation is evidenced by a variety of physiologic derangements that occur when plasma pH is either high or low. The kidneys have the predominant role in regulating the systemic bicarbonate concentration and hence, the metabolic component of acid-base balance. This function of the kidneys has two components: reabsorption of virtually all of the filtered HCO3(-) and production of new bicarbonate to replace that consumed by normal or pathologic acids. This production or generation of new HCO3(-) is done by net acid excretion. Under normal conditions, approximately one-third to one-half of net acid excretion by the kidneys is in the form of titratable acid. The other one-half to two-thirds is the excretion of ammonium. The capacity to excrete ammonium under conditions of acid loads is quantitatively much greater than the capacity to increase titratable acid. Multiple, often redundant pathways and processes exist to regulate these renal functions. Derangements in acid-base homeostasis, however, are common in clinical medicine and can often be related to the systems involved in acid-base transport in the kidneys.

  5. Glycolic Acid 15% Plus Salicylic Acid 2%

    Science.gov (United States)

    Sánchez-Blanco, Elena

    2011-01-01

    Background: Facial flat warts are a contagious viral disease that can cause disturbing cosmetic problems. Topical glycolic acid has been reported to be effective in dermatological treatment depending on the exfoliant capacity, but has not often been reported to be effective in the treatment of facial flat warts. Objective: The aim of this paper was to evaluate the efficacy and safety of glycolic acid 15% topical gel plus salicylic acid 2% in the treatment of recalcitrant facial flat warts. Methods: A total of 20 consecutive patients 7 to 16 years of age with recalcitrant facial flat warts were enrolled in this study. Patients having warts by the eye and lip regions were excluded from the study. A fine layer of face gel was applied to the treatment area once daily. Most of the participants had tried different treatments with no success. Assessments for the response and the occurrence of side effects were performed every two weeks at Weeks 2, 4, 6, and 8. Results: All the patients were clinically cured within eight weeks. Seven patients cleared in four weeks, and 13 patients cleared in eight weeks. No noticeable adverse events were related to the skin. Conclusion: Topical gel of glycolic acid 15% plus salicylic acid 2% is safe and effective when applied to facial flat warts once daily until clearance and may be considered as first-line treatment. PMID:21938272

  6. Nitrogen Lewis Acids.

    Science.gov (United States)

    Pogoreltsev, Alla; Tulchinsky, Yuri; Fridman, Natalia; Gandelman, Mark

    2017-03-22

    Being a major conception of chemistry, Lewis acids have found countless applications throughout chemical enterprise. Although many chemical elements can serve as the central atom of Lewis acids, nitrogen is usually associated with Lewis bases. Here, we report on the first example of robust and modifiable Lewis acids centered on the nitrogen atom, which provide stable and well-characterized adducts with various Lewis bases. On the basis of the reactivity of nitrogen Lewis acids, we prepared, for the first time, cyclic triazanes, a class of cyclic organic compounds sequentially bearing three all-saturated nitrogen atoms (N-N-N motif). Reactivity abilities of these N-Lewis acids were explained by theoretical calculations. Properties and future applications of nitrogen Lewis acids are intriguing.

  7. Citric Acid Alternative to Nitric Acid Passivation

    Science.gov (United States)

    Lewis, Pattie L. (Compiler)

    2013-01-01

    The Ground Systems Development and Operations GSDO) Program at NASA John F. Kennedy Space Center (KSC) has the primary objective of modernizing and transforming the launch and range complex at KSC to benefit current and future NASA programs along with other emerging users. Described as the launch support and infrastructure modernization program in the NASA Authorization Act of 2010, the GSDO Program will develop and implement shared infrastructure and process improvements to provide more flexible, affordable, and responsive capabilities to a multi-user community. In support of the GSDO Program, the purpose of this project is to demonstratevalidate citric acid as a passivation agent for stainless steel. Successful completion of this project will result in citric acid being qualified for use as an environmentally preferable alternative to nitric acid for passivation of stainless steel alloys in NASA and DoD applications.

  8. Cellular localization of mitotic RAD21 with repetitive amino acid motifs in Allium cepa.

    Science.gov (United States)

    Suzuki, Go; Nishiuchi, Chikage; Tsuru, Asami; Kako, Eri; Li, Jian; Yamamoto, Maki; Mukai, Yasuhiko

    2013-02-10

    Onion can be used in experimental observation of mitotic cell division in plant science because its chromosome is large and easy to observe. However, molecular genetic studies are difficult in onion because of its large genome size, and only limited information of onion genes has been available to date. Here we cloned and characterized an onion homologue of mitotic RAD21 gene, AcRAD21-1, to develop a molecular marker of mitosis. The N-terminal, middle, and C-terminal regions of deduced AcRAD21-1 protein sequence were conserved with Arabidopsis SYN4/AtRAD21.3 and rice OsRAD21-1, whereas three characteristic types of repetitive motifs (Repeat-1, Repeat-2/2', and Repeat-3) were observed between the conserved regions. Such inserted repetitive amino acid sequences enlarge the AcRAD21-1 protein into almost 200 kDa, which belongs to the largest class of plant proteins. Genomic organization of the AcRAD21-1 locus was also determined, and the possibility of tandem exon duplication in Repeat-2 was revealed. Subsequently, the polyclonal antiserum was raised against the N-terminal region of AcRAD21-1, and purified by affinity chromatography. Immunohistochemical analysis with the purified antibody successfully showed localization of AcRAD21-1 in onion mitosis, suggesting that it can be used as a molecular marker visualizing dynamic movement of cohesin.

  9. USGS Tracks Acid Rain

    Science.gov (United States)

    Gordon, John D.; Nilles, Mark A.; Schroder, LeRoy J.

    1995-01-01

    The U.S. Geological Survey (USGS) has been actively studying acid rain for the past 15 years. When scientists learned that acid rain could harm fish, fear of damage to our natural environment from acid rain concerned the American public. Research by USGS scientists and other groups began to show that the processes resulting in acid rain are very complex. Scientists were puzzled by the fact that in some cases it was difficult to demonstrate that the pollution from automobiles and factories was causing streams or lakes to become more acidic. Further experiments showed how the natural ability of many soils to neutralize acids would reduce the effects of acid rain in some locations--at least as long as the neutralizing ability lasted (Young, 1991). The USGS has played a key role in establishing and maintaining the only nationwide network of acid rain monitoring stations. This program is called the National Atmospheric Deposition Program/National Trends Network (NADP/NTN). Each week, at approximately 220 NADP/NTN sites across the country, rain and snow samples are collected for analysis. NADP/NTN site in Montana. The USGS supports about 72 of these sites. The information gained from monitoring the chemistry of our nation's rain and snow is important for testing the results of pollution control laws on acid rain.

  10. Parenteral Nutrition: Amino Acids

    Science.gov (United States)

    Hoffer, Leonard John

    2017-01-01

    There is growing interest in nutrition therapies that deliver a generous amount of protein, but not a toxic amount of energy, to protein-catabolic critically ill patients. Parenteral amino acids can achieve this goal. This article summarizes the biochemical and nutritional principles that guide parenteral amino acid therapy, explains how parenteral amino acid solutions are formulated, and compares the advantages and disadvantages of different parenteral amino acid products with enterally-delivered whole protein products in the context of protein-catabolic critical illness. PMID:28287411

  11. Parenteral Nutrition: Amino Acids.

    Science.gov (United States)

    Hoffer, Leonard John

    2017-03-10

    There is growing interest in nutrition therapies that deliver a generous amount of protein, but not a toxic amount of energy, to protein-catabolic critically ill patients. Parenteral amino acids can achieve this goal. This article summarizes the biochemical and nutritional principles that guide parenteral amino acid therapy, explains how parenteral amino acid solutions are formulated, and compares the advantages and disadvantages of different parenteral amino acid products with enterally-delivered whole protein products in the context of protein-catabolic critical illness.

  12. Diterpenoid acids from Grindelia nana.

    Science.gov (United States)

    Mahmoud, A A; Ahmed, A A; Tanaka, T; Iinuma, M

    2000-03-01

    Two new norditerpenoid acids of the labdane-type (norgrindelic acids), 4,5-dehydro-6-oxo-18-norgrindelic acid (1) and 4beta-hydroxy-6-oxo-19-norgrindelic acid (2), as well as a new grindelic acid derivative, 18-hydroxy-6-oxogrindelic acid (3), were isolated from the aerial parts of Grindelia nana. In addition, the known compounds, 6-oxogrindelic acid, grindelic acid, methyl grindeloate, 7alpha,8alpha-epoxygrindelic acid, and 4alpha-carboxygrindelic acid were also isolated. The structures of the new compounds were characterized on the basis of spectroscopic analysis.

  13. N-(sulfoethyl) iminodiacetic acid-based lanthanide coordination polymers: Synthesis, magnetism and quantum Monte Carlo studies

    Energy Technology Data Exchange (ETDEWEB)

    Zhuang Guilin, E-mail: glzhuang@zjut.edu.cn [Institute of Industrial Catalysis, College of Chemical Engineering and Materials Science, Zhejiang University of Technology, Hangzhou 310032 (China); Chen Wulin [Institute of Industrial Catalysis, College of Chemical Engineering and Materials Science, Zhejiang University of Technology, Hangzhou 310032 (China); Zheng Jun [Center of Modern Experimental Technology, Anhui University, Hefei 230039 (China); Yu Huiyou [Institute of Industrial Catalysis, College of Chemical Engineering and Materials Science, Zhejiang University of Technology, Hangzhou 310032 (China); Wang Jianguo, E-mail: jgw@zjut.edu.cn [Institute of Industrial Catalysis, College of Chemical Engineering and Materials Science, Zhejiang University of Technology, Hangzhou 310032 (China)

    2012-08-15

    A series of lanthanide coordination polymers have been obtained through the hydrothermal reaction of N-(sulfoethyl) iminodiacetic acid (H{sub 3}SIDA) and Ln(NO{sub 3}){sub 3} (Ln=La, 1; Pr, 2; Nd, 3; Gd, 4). Crystal structure analysis exhibits that lanthanide ions affect the coordination number, bond length and dimension of compounds 1-4, which reveal that their structure diversity can be attributed to the effect of lanthanide contraction. Furthermore, the combination of magnetic measure with quantum Monte Carlo(QMC) studies exhibits that the coupling parameters between two adjacent Gd{sup 3+} ions for anti-anti and syn-anti carboxylate bridges are -1.0 Multiplication-Sign 10{sup -3} and -5.0 Multiplication-Sign 10{sup -3} cm{sup -1}, respectively, which reveals weak antiferromagnetic interaction in 4. - Graphical abstract: Four lanthanide coordination polymers with N-(sulfoethyl) iminodiacetic acid were obtained under hydrothermal condition and reveal the weak antiferromagnetic coupling between two Gd{sup 3+} ions by Quantum Monte Carlo studies. Highlights: Black-Right-Pointing-Pointer Four lanthanide coordination polymers of H{sub 3}SIDA ligand were obtained. Black-Right-Pointing-Pointer Lanthanide ions play an important role in their structural diversity. Black-Right-Pointing-Pointer Magnetic measure exhibits that compound 4 features antiferromagnetic property. Black-Right-Pointing-Pointer Quantum Monte Carlo studies reveal the coupling parameters of two Gd{sup 3+} ions.

  14. Nucleic Acid Immunity.

    Science.gov (United States)

    Hartmann, G

    2017-01-01

    Organisms throughout biology need to maintain the integrity of their genome. From bacteria to vertebrates, life has established sophisticated mechanisms to detect and eliminate foreign genetic material or to restrict its function and replication. Tremendous progress has been made in the understanding of these mechanisms which keep foreign or unwanted nucleic acids from viruses or phages in check. Mechanisms reach from restriction-modification systems and CRISPR/Cas in bacteria and archaea to RNA interference and immune sensing of nucleic acids, altogether integral parts of a system which is now appreciated as nucleic acid immunity. With inherited receptors and acquired sequence information, nucleic acid immunity comprises innate and adaptive components. Effector functions include diverse nuclease systems, intrinsic activities to directly restrict the function of foreign nucleic acids (e.g., PKR, ADAR1, IFIT1), and extrinsic pathways to alert the immune system and to elicit cytotoxic immune responses. These effects act in concert to restrict viral replication and to eliminate virus-infected cells. The principles of nucleic acid immunity are highly relevant for human disease. Besides its essential contribution to antiviral defense and restriction of endogenous retroelements, dysregulation of nucleic acid immunity can also lead to erroneous detection and response to self nucleic acids then causing sterile inflammation and autoimmunity. Even mechanisms of nucleic acid immunity which are not established in vertebrates are relevant for human disease when they are present in pathogens such as bacteria, parasites, or helminths or in pathogen-transmitting organisms such as insects. This review aims to provide an overview of the diverse mechanisms of nucleic acid immunity which mostly have been looked at separately in the past and to integrate them under the framework nucleic acid immunity as a basic principle of life, the understanding of which has great potential to

  15. Peptide Nucleic Acids (PNA)

    DEFF Research Database (Denmark)

    2002-01-01

    A novel class of compounds, known as peptide nucleic acids, bind complementary ssDNA and RNA strands more strongly than a corresponding DNA. The peptide nucleic acids generally comprise ligands such as naturally occurring DNA bases attached to a peptide backbone through a suitable linker....

  16. Peptide Nucleic Acids

    DEFF Research Database (Denmark)

    1998-01-01

    A novel class of compounds, known as peptide nucleic acids, bind complementary ssDNA and RNA strands more strongly than a corresponding DNA. The peptide nucleic acids generally comprise ligands such as naturally occurring DNA bases attached to a peptide backbone through a suitable linker....

  17. Peptide Nucleic Acids

    DEFF Research Database (Denmark)

    2003-01-01

    A novel class of compounds, known as peptide nucleic acids, bind complementary ssDNA and RNA strands more strongly than a corresponding DNA. The peptide nucleic acids generally comprise ligands such as naturally occurring DNA bases attached to a peptide backbone through a suitable linker....

  18. Peptide Nucleic Acids

    DEFF Research Database (Denmark)

    2004-01-01

    A novel class of compounds known as peptide nucleic acids, bind complementary DNA and RNA strands, and generally do so more strongly than the corresponding DNA or RNA strands while exhibiting increased sequence specificity and solubility. The peptide nucleic acids comprise ligands selected from...

  19. Carbolic acid poisoning

    Science.gov (United States)

    ... you to. If the person swallowed the carbolic acid, give them water or milk right away, if a provider tells ... well someone does depends on how much carbolic acid they swallowed and how quickly they receive treatment. The faster medical help is given, the better ...

  20. Uric acid - blood

    Science.gov (United States)

    ... High levels of uric acid can sometimes cause gout or kidney disease. You may have this test if you have had or are about to have certain types of chemotherapy. Rapid weight loss, which may occur with such treatments, can increase the amount of uric acid in ...

  1. Neurotoxicity of Folic Acid

    NARCIS (Netherlands)

    Amsterdam van JGC; Jansen EHJM; A Opperhuizen; TOX

    2004-01-01

    The present review summarises the neurotoxicological effects of folic acid. Some studies in animals have shown that folic acid is neurotoxic and epileptogenic when applied directly to the brain. One poorly controlled and not further reproduced study from 1970 reported neurotoxic symptoms like

  2. Amino Acid Crossword Puzzle

    Science.gov (United States)

    Sims, Paul A.

    2011-01-01

    Learning the 20 standard amino acids is an essential component of an introductory course in biochemistry. Later in the course, the students study metabolism and learn about various catabolic and anabolic pathways involving amino acids. Learning new material or concepts often is easier if one can connect the new material to what one already knows;…

  3. Fats and fatty acids

    Science.gov (United States)

    The absolute fat requirement of the human species is the amount of essential fatty acids needed to maintain optimal fatty acid composition of all tissues and normal eicosanoid synthesis. At most, this requirement is no more than about 5% of an adequate energy intake. However, fat accounts for appro...

  4. Peptide Nucleic Acid Synthons

    DEFF Research Database (Denmark)

    2004-01-01

    A novel class of compounds, known as peptide nucleic acids, bind complementary ssDNA and RNA strands more strongly than a corresponding DNA. The peptide nucleic acids generally comprise ligands such as naturally occurring DNA bases attached to a peptide backbone through a suitable linker....

  5. Chlorogenic acid and caffeic acid are absorbed in humans

    OpenAIRE

    2001-01-01

    Chlorogenic acid, an ester of caffeic acid and quinic acid, is a major phenolic compound in coffee; daily intake in coffee drinkers is 0.5-1 g. Chlorogenic acid and caffeic acid are antioxidants in vitro and might therefore contribute to the prevention of cardiovascular disease. However, data on the absorption of chlorogenic acid and caffeic acid in humans are lacking. We determined the absorption of chlorogenic acid and caffeic acid in a cross-over study with 4 female and 3 male healthy ileo...

  6. Chlorogenic acid and caffeic acid are absorbed in humans

    NARCIS (Netherlands)

    Olthof, M.R.; Hollman, P.C.H.; Katan, M.B.

    2001-01-01

    Chlorogenic acid, an ester of caffeic acid and quinic acid, is a major phenolic compound in coffee; daily intake in coffee drinkers is 0.5-1 g. Chlorogenic acid and caffeic acid are antioxidants in vitro and might therefore contribute to the prevention of cardiovascular disease. However, data on the

  7. Chlorogenic acid and caffeic acid are absorbed in humans

    NARCIS (Netherlands)

    Olthof, M.R.; Hollman, P.C.H.; Katan, M.B.

    2001-01-01

    Chlorogenic acid, an ester of caffeic acid and quinic acid, is a major phenolic compound in coffee; daily intake in coffee drinkers is 0.5-1 g. Chlorogenic acid and caffeic acid are antioxidants in vitro and might therefore contribute to the prevention of cardiovascular disease. However, data on the

  8. Halogenated fatty acids

    DEFF Research Database (Denmark)

    Mu, Huiling; Wesén, Clas; Sundin, Peter

    1997-01-01

    Chlorinated fatty acids have been found to be major contributors to organohalogen compounds in fish, bivalves, jellyfish, and lobster, and they have been indicated to contribute considerably to organohalogens in marine mammals. Brominated fatty acids have been found in marine sponges. Also......, chlorinated lipids have been found in meat exposed to hypochlorite disinfected water, and in chlorine-treated flour and in products made from such flour. Following exposure to chlorine bleached pulp mill effluents, aquatic organisms may have elevated concentrations of chlorinated fatty acids in their lipids....... However, a natural production of halogenated fatty acids is also possible. In this paper we summarize the present knowledge of the occurrence of halogenated fatty acids in lipids and suggested ways of their formation. In Part II (Trends Anal. Chem. 16 (1997) 274) we deal with methods...

  9. Phenolic acids enzymatic lipophilization.

    Science.gov (United States)

    Figueroa-Espinoza, Maria-Cruz; Villeneuve, Pierre

    2005-04-20

    Lipophilization is the esterification of a lipophilic moiety (fatty acid or fatty alcohol) on different substrates (phenolic acid, sugar, protein, ...), resulting in new molecules with modified hydrophilic/lipophilic balance. This reaction can be obtained chemically or enzymatically using different enzymes. Phenolic acids possess interesting biological properties (antioxidant, chelator, free radical scavenger, UV filter, antimicrobial, ...), but because of their relatively low solubility in aprotic media, their application in oil-based products is limited. Therefore, the esterification of their carboxylic acid function with a fatty alcohol enhances their hydrophobicity and results in a multifunctional amphiphilic molecule. Enzymatic lipophilization of phenolic acids is nowadays studied for potential industrial applications. Different systems have been proposed to perform the reaction yield [free or immobilized enzymes (lipase, feruloyl esterase, tannase, etc.), free or added organic solvent, addition of surfactant, microemulsion system, etc.]. Some of the functional properties of these esters have been demonstrated. This review presents a panorama of the advances in this field.

  10. 2-Methylaspartic acid monohydrate

    Directory of Open Access Journals (Sweden)

    Ray J. Butcher

    2013-12-01

    Full Text Available The title compound, C5H9NO4·H2O, is an isomer of the α-amino acid glutamic acid that crystallizes from water in its zwitterionic form as a monohydrate. It is not one of the 20 proteinogenic α-amino acids that are used in living systems and differs from the natural amino acids in that it has an α-methyl group rather than an α-H atom. In the crystal, an O—H...O hydrogen bond is present between the acid and water molecules while extensive N—H...O and O—H...O hydrogen bonds link the components into a three-dimensional array.

  11. 氨噻肟酸稀土配合物的合成、抗氧化性及抗菌活性的研究%Synthesis,Antioxidative Activity and Antibacterial Activity of Complexes of Rare Earth with Syn-2-(2′-Aminothiazolyl-)-2-Methoxyimino Acetic Acid

    Institute of Scientific and Technical Information of China (English)

    王敏; 李一志; 李勤喜; 王流芳

    2000-01-01

    合成了12种稀土氨噻肟酸(HL)固体配合物,其通式为REL3(RE=La,Ce,Pr,Nd,Sm,Eu,Gd,Tb,Er,Tm,Yb,Y).利用元素分析、红外光谱、核磁共振氢谱、摩尔电导、热分析等测试手段对配合物进行了表征,研究了NdL3、ErL3配合物在DMSO溶液中电子吸收光谱,计算了电子云伸展效应参数(β),共价参数δ和键合参数b1/2,讨论了配合物的共价成键情况,并对其抗氧化及抗菌活性做了研究.

  12. 针刺长强穴对FMR1基因敲除小鼠海马CA1区BDNF和SYN表达的影响%Effects of Acupuncturing at Changqiang on Expressions of BDNF and SYN in Hippocampal CA1 Area of FMR1 Gene Knockout Mice

    Institute of Scientific and Technical Information of China (English)

    韩平; 俞萍; 陈可爱; 林栋; 张学君; 吴强

    2012-01-01

    目的 研究针刺长强穴对FMR1基因敲除小鼠海马CA1区脑源性神经营养因子(BDNF)与突触素(SYN)的表达. 方法 选取28日龄脆性X智力低下基因1(FMR1)缺失KO小鼠与野生型(WT)小鼠各30只,分为KO长强组、KO非穴组、KO空白组和WT长强组、WT非穴组、WT空白组,每组10只,检测小鼠海马CA1区BDNF、SYN蛋白的表达. 结果 FMR1基因敲除小鼠海马区BDNF的表达低于野生型小鼠;FMR1基因敲除小鼠长强组BDNF的表达明显高于非穴组和空白组;FMR1基因敲除小鼠海马区SYN的表达低于野生型小鼠;FMR1基因敲除小鼠长强组SYN的表达明显高于非穴组和空白组. 结论 针刺长强穴能上调FMR1基因敲除小鼠海马CA1区BDNF和SYN的表达.

  13. A phase 1 study of a meningococcal native outer membrane vesicle vaccine made from a group B strain with deleted lpxL1 and synX, over-expressed factor H binding protein, two PorAs and stabilized OpcA expression.

    Science.gov (United States)

    Keiser, P B; Biggs-Cicatelli, S; Moran, E E; Schmiel, D H; Pinto, V B; Burden, R E; Miller, L B; Moon, J E; Bowden, R A; Cummings, J F; Zollinger, W D

    2011-02-04

    This phase I clinical trial assessed the safety and immunogenicity of a native outer membrane vesicle (NOMV) vaccine prepared from an lpxL1(-) synX(-) mutant of strain 8570(B:4:P1.19,15:L8-5) of Neisseria meningitidis. Additional mutations enhance the expression of factor H binding protein variant 1 (fHbp v.1), stabilize expression of OpcA and introduce a second PorA (P1.22,14). Thirty-six volunteers were assigned to one of four dose groups (10, 25, 50 and 75 mcg, based on protein content) to receive three intramuscular injections at six week intervals with aluminum hydroxide adjuvant. Specific local and systemic adverse events were solicited by diary and at visits on days 2, 7, and 14 after each vaccination. Blood chemistries, complete blood count, and coagulation studies were measured on each vaccination day and again 2 and 14 days later. Blood for ELISA and serum bactericidal assays was drawn two and six weeks after each vaccination. The proportion of volunteers who developed a fourfold or greater increase in bactericidal activity to the wild type parent of the vaccine strain at two weeks after the third dose was 27 out of 34 (0.79, 95% C.I. 0.65-0.93). Against four other group B strains the response rate ranged from 41% to 82% indicating a good cross reactive antibody response. Depletion assays show contributions to bactericidal activity from antibodies to lipooligosaccharide (LOS), fHbp v.1 and OpcA. Published by Elsevier Ltd.

  14. Composition of amino acids, fatty acids and dietary fibre monomers ...

    African Journals Online (AJOL)

    Composition of amino acids, fatty acids and dietary fibre monomers in kernels of ... Nuts are rich in protein and essential amino acids, and have a high energy value ... of protein, especially when combined with foods with high lysine content.

  15. Amino acids analysis during lactic acid fermentation by single strain ...

    African Journals Online (AJOL)

    SAM

    2014-07-09

    Jul 9, 2014 ... of the three LAB strains to utilize amino acids for growth and lactic acid production were employed to ... Lactic acid bacteria (LAB), which are used for the ..... and characterization of potential probiotic lactobacilli from pig feces.

  16. Trans Fatty Acids

    Science.gov (United States)

    Doyle, Ellin

    1997-09-01

    Fats and their various fatty acid components seem to be a perennial concern of nutritionists and persons concerned with healthful diets. Advice on the consumption of saturated, polyunsaturated, monounsaturated, and total fat bombards us from magazines and newspapers. One of the newer players in this field is the group of trans fatty acids found predominantly in partially hydrogenated fats such as margarines and cooking fats. The controversy concerning dietary trans fatty acids was recently addressed in an American Heart Association (AHA) science advisory (1) and in a position paper from the American Society of Clinical Nutrition/American Institute of Nutrition (ASCN/AIN) (2). Both reports emphasize that the best preventive strategy for reducing risk for cardiovascular disease and some types of cancer is a reduction in total and saturated fats in the diet, but a reduction in the intake of trans fatty acids was also recommended. Although the actual health effects of trans fatty acids remain uncertain, experimental evidence indicates that consumption of trans fatty acids adversely affects serum lipid levels. Since elevated levels of serum cholesterol and triacylglycerols are associated with increased risk of cardiovascular disease, it follows that intake of trans fatty acids should be minimized.

  17. Gluconic acid production.

    Science.gov (United States)

    Anastassiadis, Savas; Morgunov, Igor G

    2007-01-01

    Gluconic acid, the oxidation product of glucose, is a mild neither caustic nor corrosive, non toxic and readily biodegradable organic acid of great interest for many applications. As a multifunctional carbonic acid belonging to the bulk chemicals and due to its physiological and chemical characteristics, gluconic acid itself, its salts (e.g. alkali metal salts, in especially sodium gluconate) and the gluconolactone form have found extensively versatile uses in the chemical, pharmaceutical, food, construction and other industries. Present review article presents the comprehensive information of patent bibliography for the production of gluconic acid and compares the advantages and disadvantages of known processes. Numerous manufacturing processes are described in the international bibliography and patent literature of the last 100 years for the production of gluconic acid from glucose, including chemical and electrochemical catalysis, enzymatic biocatalysis by free or immobilized enzymes in specialized enzyme bioreactors as well as discontinuous and continuous fermentation processes using free growing or immobilized cells of various microorganisms, including bacteria, yeast-like fungi and fungi. Alternatively, new superior fermentation processes have been developed and extensively described for the continuous and discontinuous production of gluconic acid by isolated strains of yeast-like mold Aureobasidium pullulans, offering numerous advantages over the traditional discontinuous fungi processes.

  18. Sulfuric Acid on Europa

    Science.gov (United States)

    1999-01-01

    Frozen sulfuric acid on Jupiter's moon Europa is depicted in this image produced from data gathered by NASA's Galileo spacecraft. The brightest areas, where the yellow is most intense, represent regions of high frozen sulfuric acid concentration. Sulfuric acid is found in battery acid and in Earth's acid rain. This image is based on data gathered by Galileo's near infrared mapping spectrometer.Europa's leading hemisphere is toward the bottom right, and there are enhanced concentrations of sulfuric acid in the trailing side of Europa (the upper left side of the image). This is the face of Europa that is struck by sulfur ions coming from Jupiter's innermost moon, Io. The long, narrow features that crisscross Europa also show sulfuric acid that may be from sulfurous material extruded in cracks. Galileo, launched in 1989, has been orbiting Jupiter and its moons since December 1995. JPL manages the Galileo mission for NASA's Office of Space Science, Washington DC. JPL is a division of the California Institute of Technology, Pasadena, CA.

  19. Fusidic acid in dermatology

    DEFF Research Database (Denmark)

    Schöfer, Helmut; Simonsen, Lene

    1995-01-01

    efficacy and tolerability. Similarly, plain fusidic acid cream or ointment used two or three times daily in SSTIs such as impetigo are clinically and bacteriologically effective, with minimal adverse events. Combination formulations of fusidic acid with 1% hydrocortisone or 0.1% betamethasone achieve...... excellent results in infected eczema by addressing both inflammation and infection. A new lipid-rich combination formulation provides an extra moisturizing effect. Development of resistance to fusidic acid has remained generally low or short-lived and can be minimized by restricting therapy to no more than...

  20. Acid rain: An overview

    Data.gov (United States)

    US Fish and Wildlife Service, Department of the Interior — Summary of the effects of acid rain and related processes, sources, issues, corrective actions, research, current law, potential solutions, political solutions,...

  1. Fatty Acid Oxidation Disorders

    Science.gov (United States)

    ... acid oxidation disorders are tested for in newborn screening? The March of Dimes recommends that all babies ... in behavior Diarrhea, nausea (feeling sick to your stomach) and throwing up Drowsiness Fever Fussiness Little appetite ...

  2. Synthesis of aminoaldonic acids

    DEFF Research Database (Denmark)

    Jørgensen, Christel Thea

    With the aim of synthesising aminoaldonic acids, two 2-acetamido-2-deoxyaldonolactones with D-galacto (6) and D-arabino (11) configuration were prepared from acetylated sugar formazans in analogy with a known procedure. Empolying the same procedure to acetylated sugar phenylhydrazones gave mixtures....... The aziridino amides 43 and 51 were reductively cleaved with hydrazine to give 3-amino-2,3-dideoxyhexonhydrazides 83 and 85, which were easily converted into the corresponding lactone 84 and acid 86. The aziridine ring of 43 and 51 was also opened with acetic acid to give the 3-amino-3-deoxyhexonic acids 79...... and 82, respectively. The aminolactone 84 was converted into the corresponding amino sugar 89.With the aim of synthesising substrates for the Pictet-Spengler reaction three 4-aldehydo acetamidodideoxytetronolactones 92, 97 and 103 were prepared by periodate cleavage of the corresponding hexonolactones...

  3. [Hydrofluoric acid burns].

    Science.gov (United States)

    Holla, Robin; Gorter, Ramon R; Tenhagen, Mark; Vloemans, A F P M Jos; Breederveld, Roelf S

    2016-01-01

    Hydrofluoric acid is increasingly used as a rust remover and detergent. Dermal contact with hydrofluoric acid results in a chemical burn characterized by severe pain and deep tissue necrosis. It may cause electrolyte imbalances with lethal consequences. It is important to identify high-risk patients. 'High risk' is defined as a total affected body area > 3% or exposure to hydrofluoric acid in a concentration > 50%. We present the cases of three male patients (26, 31, and 39 years old) with hydrofluoric acid burns of varying severity and describe the subsequent treatments. The application of calcium gluconate 2.5% gel to the skin is the cornerstone of the treatment, reducing pain as well as improving wound healing. Nails should be thoroughly inspected and possibly removed if the nail is involved, to ensure proper healing. In high-risk patients, plasma calcium levels should be evaluated and cardiac monitoring is indicated.

  4. Azetidinic amino acids

    DEFF Research Database (Denmark)

    Bräuner-Osborne, Hans; Bunch, Lennart; Chopin, Nathalie

    2005-01-01

    A set of ten azetidinic amino acids, that can be envisioned as C-4 alkyl substituted analogues of trans-2-carboxyazetidine-3-acetic acid (t-CAA) and/or conformationally constrained analogues of (R)- or (S)-glutamic acid (Glu) have been synthesized in a diastereo- and enantiomerically pure form from...... of two diastereoisomers that were easily separated and converted in two steps into azetidinic amino acids. Azetidines 35-44 were characterized in binding studies on native ionotropic Glu receptors and in functional assays at cloned metabotropic receptors mGluR1, 2 and 4, representing group I, II and III...... beta-amino alcohols through a straightforward five step sequence. The key step of this synthesis is an original anionic 4-exo-tet ring closure that forms the azetidine ring upon an intramolecular Michael addition. This reaction was proven to be reversible and to lead to a thermodynamic distribution...

  5. Amino acid racemisation dating

    Energy Technology Data Exchange (ETDEWEB)

    Murray-Wallace, C.V. [University of Wollongong, Wollongong, NSW (Australia). School of Geosciences

    1999-11-01

    The potential of the time-dependent amino acid racemisation reaction as a method of age assessment was first reported by Hare and Abelson (1968). They noted that in specimens of the bivalve mollusc Mercenaria sp., greater concentrations of amino acids in the D-configuration with increasing fossil age. Hare and Abelson (1968) also reported negligible racemisation in a modern specimen of Mecanaria sp. On this basis they suggested that the extent of amino acid racemisation (epimerisation in the case of isoleucine) may be used to assess the age of materials within and beyond the range of radiocarbon dating. For the past thirty years amino acid racemisation has been extensively applied in Quaternary research as a method of relative and numeric dating, and a particularly large literature has emerged on the subject 12 refs.

  6. Folic acid - test

    Science.gov (United States)

    ... folic acid before and during pregnancy helps prevent neural tube defects, such as spina bifida. Women who are ... take more if they have a history of neural tube defects in earlier pregnancies. Ask your provider how ...

  7. Amino Acids and Chirality

    Science.gov (United States)

    Cook, Jamie E.

    2012-01-01

    Amino acids are among the most heavily studied organic compound class in carbonaceous chondrites. The abundance, distributions, enantiomeric compositions, and stable isotopic ratios of amino acids have been determined in carbonaceous chondrites fi'om a range of classes and petrographic types, with interesting correlations observed between these properties and the class and typc of the chondritcs. In particular, isomeric distributions appear to correlate with parent bodies (chondrite class). In addition, certain chiral amino acids are found in enantiomeric excess in some chondrites. The delivery of these enantiomeric excesses to the early Earth may have contributed to the origin of the homochirality that is central to life on Earth today. This talk will explore the amino acids in carbonaceous chondritcs and their relevance to the origin of life.

  8. Ethylenediaminetetraacetic acid in endodontics

    OpenAIRE

    Mohammadi, Zahed; Shalavi, Sousan; Jafarzadeh, Hamid

    2013-01-01

    Ethylenediaminetetraacetic acid (EDTA) is a chelating agent can bind to metals via four carboxylate and two amine groups. It is a polyamino carboxylic acid and a colorless, water-soluble solid, which is widely used to dissolve lime scale. It is produced as several salts, notably disodium EDTA and calcium disodium EDTA. EDTA reacts with the calcium ions in dentine and forms soluble calcium chelates. A review of the literature and a discussion of the different indications and considerations for...

  9. Recognition of Nucleoside Monophosphate Substrates by Haemophilus influenzae Class C Acid Phosphatase

    Energy Technology Data Exchange (ETDEWEB)

    Singh, Harkewal; Schuermann, Jonathan P.; Reilly, Thomas J.; Calcutt, Michael J.; Tanner, John J. (Cornell); (UMC)

    2010-12-08

    The e (P4) phosphatase from Haemophilus influenzae functions in a vestigial NAD{sup +} utilization pathway by dephosphorylating nicotinamide mononucleotide to nicotinamide riboside. P4 is also the prototype of class C acid phosphatases (CCAPs), which are nonspecific 5{prime},3{prime}-nucleotidases localized to the bacterial outer membrane. To understand substrate recognition by P4 and other class C phosphatases, we have determined the crystal structures of a substrate-trapping mutant P4 enzyme complexed with nicotinamide mononucleotide, 5{prime}-AMP, 3{prime}-AMP, and 2{prime}-AMP. The structures reveal an anchor-shaped substrate-binding cavity comprising a conserved hydrophobic box that clamps the nucleotide base, a buried phosphoryl binding site, and three solvent-filled pockets that contact the ribose and the hydrogen-bonding edge of the base. The span between the hydrophobic box and the phosphoryl site is optimal for recognizing nucleoside monophosphates, explaining the general preference for this class of substrate. The base makes no hydrogen bonds with the enzyme, consistent with an observed lack of base specificity. Two solvent-filled pockets flanking the ribose are key to the dual recognition of 5{prime}-nucleotides and 3{prime}-nucleotides. These pockets minimize the enzyme's direct interactions with the ribose and provide sufficient space to accommodate 5{prime} substrates in an anti conformation and 3{prime} substrates in a syn conformation. Finally, the structures suggest that class B acid phosphatases and CCAPs share a common strategy for nucleotide recognition.

  10. Bile acid sequestrants

    DEFF Research Database (Denmark)

    Hansen, Morten; Sonne, David P; Knop, Filip K

    2014-01-01

    Bile acids are synthesized in the liver from cholesterol and have traditionally been recognized for their role in absorption of lipids and in cholesterol homeostasis. In recent years, however, bile acids have emerged as metabolic signaling molecules that are involved in the regulation of lipid an......-lowering effect in patients with type 2 diabetes remain unclear. This article offers a review of the mechanisms behind the glucose-lowering effect of BASs, and the efficacy of BASs in the treatment of type 2 diabetes....... of the enterohepatic circulation. This increases bile acid synthesis and consequently reduces serum low-density lipoprotein cholesterol. Also, BASs improve glycemic control in patients with type 2 diabetes. Despite a growing understanding of the impact of BASs on glucose metabolism, the mechanisms behind their glucose...... and glucose metabolism, and possibly energy homeostasis, through activation of the bile acid receptors farnesoid X receptor (FXR) and TGR5. Bile acid sequestrants (BASs) constitute a class of drugs that bind bile acids in the intestine to form a nonabsorbable complex resulting in interruption...

  11. Fatty Acid Biosynthesis IX

    DEFF Research Database (Denmark)

    Carey, E. M.; Hansen, Heinz Johs. Max; Dils, R.

    1972-01-01

    # 1. I. [I-14C]Acetate was covalently bound to rabbit mammary gland fatty acid synthetase by enzymic transacylation from [I-14C]acetyl-CoA. Per mole of enzyme 2 moles of acetate were bound to thiol groups and up to I mole of acetate was bound to non-thiol groups. # 2. 2. The acetyl-fatty acid...... synthetase complex was isolated free from acetyl-CoA. It was rapidly hydrolysed at 30°C, but hydrolysis was greatly diminished at o°C and triacetic lactone synthesis occurred. In the presence of malonyl-CoA and NADPH, all the acetate bound to fatty acid synthetase was incorporated into long-chain fatty acids....... Hydrolysis of bound acetate and incorporation of bound acetate into fatty acids were inhibited to the same extent by guanidine hydrochloride. # 3. 3. Acetate was also covalently bound to fatty acid synthetase by chemical acetylation with [I-14C]acetic anhydride in the absence of CoASH. A total of 60 moles...

  12. Neutron Nucleic Acid Crystallography.

    Science.gov (United States)

    Chatake, Toshiyuki

    2016-01-01

    The hydration shells surrounding nucleic acids and hydrogen-bonding networks involving water molecules and nucleic acids are essential interactions for the structural stability and function of nucleic acids. Water molecules in the hydration shells influence various conformations of DNA and RNA by specific hydrogen-bonding networks, which often contribute to the chemical reactivity and molecular recognition of nucleic acids. However, X-ray crystallography could not provide a complete description of structural information with respect to hydrogen bonds. Indeed, X-ray crystallography is a powerful tool for determining the locations of water molecules, i.e., the location of the oxygen atom of H2O; however, it is very difficult to determine the orientation of the water molecules, i.e., the orientation of the two hydrogen atoms of H2O, because X-ray scattering from the hydrogen atom is very small.Neutron crystallography is a specialized tool for determining the positions of hydrogen atoms. Neutrons are not diffracted by electrons, but are diffracted by atomic nuclei; accordingly, neutron scattering lengths of hydrogen and its isotopes are comparable to those of non-hydrogen atoms. Therefore, neutron crystallography can determine both of the locations and orientations of water molecules. This chapter describes the current status of neutron nucleic acid crystallographic research as well as the basic principles of neutron diffraction experiments performed on nucleic acid crystals: materials, crystallization, diffraction experiments, and structure determination.

  13. SynLight - the world's largest artificial sun

    Science.gov (United States)

    Wieghardt, Kai; Funken, Karl-Heinz; Dibowski, Gerd; Hoffschmidt, Bernhard; Laaber, Dmitrij; Hilger, Patrick; Eßer, Kai-Peter

    2016-05-01

    High-flux solar simulators, providing predictable and reproducible solar radiation, have emerged to indispensable tools for efficient development of CSP components or solar chemical processes. In the last decade, a number of such facilities have been erected, however significantly below the typical scale of pilot plants. DLR started the construction of a large solar simulator in Jülich near its solar power tower. The facilities' modular design is novel and characterized by 149 individually controllable 7kW Xenon short-arc lamps. Solar radiant powers of up to 280kW and 2 x 220kW are expected to be available in three separately useable radiation chambers. In 2017, the large artificial sun shall be available for the global CSP and solar chemical community within cooperative research projects.

  14. Nazikommunisme? : Arbeiderpartiets syn på Sovjetunionen 1939-40

    OpenAIRE

    Sundvall, Eirik Wig

    2013-01-01

    Den 23. August 1939 inngikk Sovjetunionen ikkeangrepspakt med det nazistiske Tyskland. Pakten ga Hitler frie tøyler til å gå til krig mot Polen, noe han gjorde litt over en uke senere. 17. september marsjerte sovjetiske tropper inn i Øst-Polen med tysk velsignelse. I november samme år angrep Sovjetunionen Finland. Den norske arbeiderbevegelsen var rystet i grunnvollene. «Nazikommunisme» ble et vanlig skjellsord for å betegne Sovjetunionens nye linje. Sovjets utenrikspolitikk i disse månedene,...

  15. Genomet og syns- og høresansen

    DEFF Research Database (Denmark)

    Tranebjærg, Lisbeth; Rendtorff, Nanna Dahl; Brøndum-Nielsen, Karen

    2014-01-01

    understanding of pathophysiology, eventually leading to novel and more individualized treatments. Furthermore, genetic evaluation and counselling can contribute to molecular diagnosis, better prognostication, and mode of inheritance. Next Generation Sequencing is a technology well suited to dissect the vast...

  16. strain partitioning and dimensional preferred orientation in a syn ...

    African Journals Online (AJOL)

    Administrator

    a non-hydrostatic stress state, dimensional preferred orientation and strain are partitioned ... attention paid to the relationship existing among the various lithology ... Macroscopic analysis: The most dominant intrusive rock type in the western ... Mesoscopic observations: At the level of the exposure and hand specimen, the ...

  17. RT-Syn: A real-time software system generator

    Science.gov (United States)

    Setliff, Dorothy E.

    1992-01-01

    This paper presents research into providing highly reusable and maintainable components by using automatic software synthesis techniques. This proposal uses domain knowledge combined with automatic software synthesis techniques to engineer large-scale mission-critical real-time software. The hypothesis centers on a software synthesis architecture that specifically incorporates application-specific (in this case real-time) knowledge. This architecture synthesizes complex system software to meet a behavioral specification and external interaction design constraints. Some examples of these external constraints are communication protocols, precisions, timing, and space limitations. The incorporation of application-specific knowledge facilitates the generation of mathematical software metrics which are used to narrow the design space, thereby making software synthesis tractable. Success has the potential to dramatically reduce mission-critical system life-cycle costs not only by reducing development time, but more importantly facilitating maintenance, modifications, and extensions of complex mission-critical software systems, which are currently dominating life cycle costs.

  18. Syn-collision Hairhan layered intrusion, Lakes Zone, Western Mongolia

    Science.gov (United States)

    Vishnevskiy, A. V.; Izokh, A. E.; Kalugin, V. M.; Gertner, I. F.

    2012-04-01

    In the structure of the Lakes Zone of Western Mongolia, which is reconstructed as the Early Cambrian island arc (Lakes island arc terrane), there are several groups of contiguous space gabbroic intrusions, merged in Hirgisnuur complex. The largest (70 km2) is Hairhan intrusion, located in the central part of the Lake Zone in the Bumbat-Hairhan ridge. The structure of the intrusion disturbed by later tectonic movements and the subsequent formation of Cambrian granitoids Tohtoginshil complex. The structures of the body are two groups of rocks: layered series and marginal facies, fragmentary spread to the periphery of intrusion. Gabbronorites of marginal facies have intrusive contacts with the sedimentary rocks of Early Cambrian age Burgastay formation. The marginal facies, apparent thickness which is 1.5 km, is composed primarily of non-olivine gabbronorites in which there is trachytoid and sometimes bedding. Layered series composes the central part of the Hairhan intrusion, the direction of layering has a northwest strike, coaxial with the long axis of the intrusion. The lower part of the layered series consists mainly troctolites with minor olivine gabbroids. The upper part of the layered series consists mainly of olivine gabbro, troctolite occur here less frequently also observed small schlieren anorthosites. Of particular interest is the horizon taxitic gabbro and being above it - the horizon orbicular gabbro at the top of the layered series. The rocks are widely manifested magmatic disruptive and plastic deformation - both macro and micro levels. They are expressed in the collapse of layering of elements in small folds of varying amplitude (typically to a few tens centimeters), often passing into areas and zones taxitic disruption. The greatest number of these structural elements characteristic of the upper part of the layered series, including the orbicular gabbro and troctolites taxitic horizons. These features indicate intensive tectonic processes that accompanied not only direct intruding, but also the further formation of the magmatic body. Considering we have obtained petrochemical and geochemical data can be summarized that the rocks Hairhan intrusive are of low-Ti and high-Al gabbroic rocks, characterized by Th-U, Zr-Hf, and Ta-Nb minima, a moderate enrichment of LIL-elements and a maximum of Sr, which indicates the source of the melt, associated with island arc related setting. Marginal facies rocks are characterized by increased amounts of TiO2, K2O, P2O5, and more Fe#. The spectra of the REE distribution have identical shape, and differ only by the concentration of the elements. The dating of rocks by SHRIMP-II on single grains of zircon showed age 511±12 Ma, which are reported by other researchers of Lakes Zone indicates the formation of Hairhan intrusion in the settings of island arc accretion to the Proterozoic Baidrag block of Central Mongolia.

  19. SynCoPation: Interactive Synthesis-Coupled Sound Propagation.

    Science.gov (United States)

    Rungta, Atul; Schissler, Carl; Mehra, Ravish; Malloy, Chris; Lin, Ming; Manocha, Dinesh

    2016-04-01

    Recent research in sound simulation has focused on either sound synthesis or sound propagation, and many standalone algorithms have been developed for each domain. We present a novel technique for coupling sound synthesis with sound propagation to automatically generate realistic aural content for virtual environments. Our approach can generate sounds from rigid-bodies based on the vibration modes and radiation coefficients represented by the single-point multipole expansion. We present a mode-adaptive propagation algorithm that uses a perceptual Hankel function approximation technique to achieve interactive runtime performance. The overall approach allows for high degrees of dynamism - it can support dynamic sources, dynamic listeners, and dynamic directivity simultaneously. We have integrated our system with the Unity game engine and demonstrate the effectiveness of this fully-automatic technique for audio content creation in complex indoor and outdoor scenes. We conducted a preliminary, online user-study to evaluate whether our Hankel function approximation causes any perceptible loss of audio quality. The results indicate that the subjects were unable to distinguish between the audio rendered using the approximate function and audio rendered using the full Hankel function in the Cathedral, Tuscany, and the Game benchmarks.

  20. Performance Comparison of New Combinations of Acids with Mud Acid in Sandstone Acidizing

    Directory of Open Access Journals (Sweden)

    Mian Umer Shafiq

    2014-01-01

    Full Text Available The aim of this research is to find the best suitable acid to acidize undamaged low permeable sandstone formation Stimulation of sandstone formations is a challenging task, which involves several chemicals and physical interactions of the acid with the formation. Mud acid has been successfully used to stimulate sandstone reservoirs for a number of years. Matrix acidizing may also be used to increase formation permeability in undamaged wells. The change may be up to 50 to 100% with the mud acid. For any acidizing process, the selection of acid (Formulation and Concentration and the design (Pre-flush, Main Acid, After-flush is very important. Different researchers are using different combinations of acids with different concentrations to get the best results for acidization. Mainly the common practice is combination of Hydrochloric Acid- Hydrofluoric with Concentration (3% HF-12% HCl. This study presents the results of a laboratory investigation of Orthophosphoric acid instead of hydrochloric acid in one combination and the second combination is Fluoboric and formic acid and the third one is formic and hydrofluoric acid. The results are compared with the mud acid and the results analyzed are porosity, permeability, strength, color change and FESEM Analysis. All of these new combinations shows that these have the potential to be used as acidizing acids on sandstone formations.

  1. Acidification and Acid Rain

    Science.gov (United States)

    Norton, S. A.; Veselã½, J.

    2003-12-01

    Air pollution by acids has been known as a problem for centuries (Ducros, 1845; Smith, 1872; Camuffo, 1992; Brimblecombe, 1992). Only in the mid-1900s did it become clear that it was a problem for more than just industrially developed areas, and that precipitation quality can affect aquatic resources ( Gorham, 1955). The last three decades of the twentieth century saw tremendous progress in the documentation of the chemistry of the atmosphere, precipitation, and the systems impacted by acid atmospheric deposition. Chronic acidification of ecosystems results in chemical changes to soil and to surface waters and groundwater as a result of reduction of base cation supply or an increase in acid (H+) supply, or both. The most fundamental changes during chronic acidification are an increase in exchangeable H+ or Al3+ (aluminum) in soils, an increase in H+ activity (˜concentration) in water in contact with soil, and a decrease in alkalinity in waters draining watersheds. Water draining from the soil is acidified and has a lower pH (=-log [H+]). As systems acidify, their biotic community changes.Acidic surface waters occur in many parts of the world as a consequence of natural processes and also due to atmospheric deposition of strong acid (e.g., Canada, Jeffries et al. (1986); the United Kingdom, Evans and Monteith (2001); Sweden, Swedish Environmental Protection Board (1986); Finland, Forsius et al. (1990); Norway, Henriksen et al. (1988a); and the United States (USA), Brakke et al. (1988)). Concern over acidification in the temperate regions of the northern hemisphere has been driven by the potential for accelerating natural acidification by pollution of the atmosphere with acidic or acidifying compounds. Atmospheric pollution ( Figure 1) has resulted in an increased flux of acid to and through ecosystems. Depending on the ability of an ecosystem to neutralize the increased flux of acidity, acidification may increase only imperceptibly or be accelerated at a rate that

  2. Inhibitory effect of ethanol, acetic acid, propionic acid and butyric acid on fermentative hydrogen production

    Energy Technology Data Exchange (ETDEWEB)

    Wang, Bo; Wan, Wei; Wang, Jianlong [Laboratory of Environmental Technology, INET, Tsinghua University, Beijing 100084 (China)

    2008-12-15

    The inhibitory effect of added ethanol, acetic acid, propionic acid and butyric acid on fermentative hydrogen production by mixed cultures was investigated in batch tests using glucose as substrate. The experimental results showed that, at 35 C and initial pH 7.0, during the fermentative hydrogen production, the substrate degradation efficiency, hydrogen production potential, hydrogen yield and hydrogen production rate all trended to decrease with increasing added ethanol, acetic acid, propionic acid and butyric acid concentration from 0 to 300 mmol/L. The inhibitory effect of added ethanol on fermentative hydrogen production was smaller than those of added acetic acid, propionic acid and butyric acid. The modified Han-Levenspiel model could describe the inhibitory effects of added ethanol, acetic acid, propionic acid and butyric acid on fermentative hydrogen production rate in this study successfully. The modified Logistic model could describe the progress of cumulative hydrogen production. (author)

  3. Synthesis and anticonvulsant activity of novel bicyclic acidic amino acids

    DEFF Research Database (Denmark)

    Conti, Paola; De Amici, Marco; Joppolo Di Ventimiglia, Samuele

    2003-01-01

    Bicyclic acidic amino acids (+/-)-6 and (+/-)-7, which are conformationally constrained homologues of glutamic acid, were prepared via a strategy based on a 1,3-dipolar cycloaddition. The new amino acids were tested toward ionotropic and metabotropic glutamate receptor subtypes; both of them...

  4. EFFECT OF ACIDITY ON ACID-SENSITIVE UV CURING SYSTEM

    Institute of Scientific and Technical Information of China (English)

    Qi-dao Chen; Bing Wu; Xiao-yin Hong

    1999-01-01

    By using diphenyliodonium salts with different counterions as photo acid generators (PAGs), the effect of acidity on ring-opening polymerization of epoxy monomers and polycondensation of polyol with hexamethoxymethyl melamine (HMMM) was studied. The result shows that the rate of ring-opening polymerization is evidently dependent on the acidity of the acid and strong photo-generated acid is required.However, there is a leveling effect in the polycondensation system; if the photo-generated acid is stronger than protonated HMMM, the acidity does not obviously affect the polycondensation rate.

  5. Determination of Sialic Acids by Acidic Ninhydrin Reaction

    Directory of Open Access Journals (Sweden)

    Yao,Kenzabroh

    1987-12-01

    Full Text Available A new acidic ninhydrin method for determining free sialic acids is described. The method is based on the reaction of sialic acids with Gaitonde's acid ninhydrin reagent 2 which yields a stable color with an absorption maximum at 470 nm. The standard curve is linear in the range of 5 to 500 nmol of N-acetylneuraminic acid per 0.9 ml of reaction mixture. The reaction was specific only for sialic acids among the various sugars and sugar derivatives examined. Some interference of this method by cysteine, cystine and tryptophan was noted, although their absorption maxima differed from that of sialic acids. The interference by these amino acids was eliminated with the use of a small column of cation-exchange resin. The acidic ninhydrin method provides a simple and rapid method for the determination of free sialic acids in biological materials.

  6. Domoic Acid Epileptic Disease

    Directory of Open Access Journals (Sweden)

    John S. Ramsdell

    2014-03-01

    Full Text Available Domoic acid epileptic disease is characterized by spontaneous recurrent seizures weeks to months after domoic acid exposure. The potential for this disease was first recognized in a human case study of temporal lobe epilepsy after the 1987 amnesic shellfish-poisoning event in Quebec, and was characterized as a chronic epileptic syndrome in California sea lions through investigation of a series of domoic acid poisoning cases between 1998 and 2006. The sea lion study provided a breadth of insight into clinical presentations, unusual behaviors, brain pathology, and epidemiology. A rat model that replicates key observations of the chronic epileptic syndrome in sea lions has been applied to identify the progression of the epileptic disease state, its relationship to behavioral manifestations, and to define the neural systems involved in these behavioral disorders. Here, we present the concept of domoic acid epileptic disease as a delayed manifestation of domoic acid poisoning and review the state of knowledge for this disease state in affected humans and sea lions. We discuss causative mechanisms and neural underpinnings of disease maturation revealed by the rat model to present the concept for olfactory origin of an epileptic disease; triggered in dendodendritic synapases of the olfactory bulb and maturing in the olfactory cortex. We conclude with updated information on populations at risk, medical diagnosis, treatment, and prognosis.

  7. Hydrogen production by fermentation using acetic acid and lactic acid.

    Science.gov (United States)

    Matsumoto, Mitsufumi; Nishimura, Yasuhiko

    2007-03-01

    Microbial hydrogen production from sho-chu post-distillation slurry solution (slurry solution) containing large amounts of organic acids was investigated. The highest hydrogen producer, Clostridium diolis JPCC H-3, was isolated from natural environment and produced hydrogen at 6.03+/-0.15 ml from 5 ml slurry solution in 30 h. Interestingly, the concentration of acetic acid and lactic acid in the slurry solution decreased during hydrogen production. The substrates for hydrogen production by C. diolis JPCC H-3, in particular organic acids, were investigated in an artificial medium. No hydrogen was produced from acetic acid, propionic acid, succinic acid, or citric acid on their own. Hydrogen and butyric acid were produced from a mixture of acetic acid and lactic acid, showing that C. diolis. JPCC H-3 could produce hydrogen from acetic acid and lactic acid. Furthermore, calculation of the Gibbs free energy strongly suggests that this reaction would proceed. In this paper, we describe for the first time microbial hydrogen production from acetic acid and lactic acid by fermentation.

  8. Halogenated fatty acids

    DEFF Research Database (Denmark)

    Mu, Huiling; Sundin, Peter; Wesén, Clas

    1997-01-01

    Halogenated fatty acids are the major contributors to organohalogen compounds in lipids of marine mammals, fish, and bivalves. For the initial characterization of these recently noticed compounds, a determination of the halogen concentration has usually been combined with some lipid isolation...... and separation method. This review covers separation by solid phase chromatography, gel permeation chromatography, and liquid-liquid extraction, followed by halogen determination. All studies performed according to this outline have indicated that the major organohalogen compounds are chlorinated fatty acids...... bound in different lipids. For the detection and identification of individual, halogenated fatty acid methyl esters (FAMEs) liberated from the lipids, gas chromatography (GC) has been employed together with detection methods such as electron capture detection, electrolytic conductivity detection (ELCD...

  9. Synergistic effect of docosahexaenoic acid on anticonvulsant activity of valproic acid and lamotrigine in animal seizure models.

    Science.gov (United States)

    Gavzan, Hakimeh; Sayyah, Mohammad; Sardari, Soroush; Babapour, Vahab

    2015-10-01

    Add-on therapy is a common strategy to improve efficacy and tolerability of antiepileptic drugs (AEDs). Anticonvulsant potential and appropriate safety of docosahexaenoic acid (DHA) makes it a promising candidate for combination therapy. We evaluated influence of DHA on anticonvulsant activity of AEDs phenytoin, valproate, and lamotrigine in maximal electroshock (MES), pentylenetetrazole (PTZ), and kindling models of epilepsy. The dose-response to DHA was obtained 15 min after intracerebroventricular (i.c.v.) injection in PTZ model of clonic seizures in mice, MES model of tonic seizures in mice, and kindling model of complex partial seizures in rats. The dose-response curve of valproate (30 min after i.p. injection to mice) in PTZ, phenytoin (60 min after i.p. injection to mice) in MES, and lamotrigine (60 min after i.p. injection to rats) in kindling models were obtained. Dose-response curves of the AEDs were then achieved in the presence of ED25 of DHA. DHA had no anticonvulsant effect in the MES model. However, it showed a dose-dependent protective effect against PTZ (ED50 = 0.13 μM) and kindled seizures (ED50 = 1.08 mM). DHA at ED25 caused a 3.6-fold increase in potency of valproate as its ED50 value from 117.5 (98.3-135.3) decreased to 32.5 (21.6-44.1) mg/kg. Moreover, a 4.9-fold increase in potency of lamotrigine occurred, as its ED50 value from 13.10 (11.50-14.9) decreased to 2.65 (0.8-5.6) mg/kg. CompuSyn analysis indicated synergistic anticonvulsant interaction between DHA and both valproate and lamotrigine. Co-administration strategy of the safe and inexpensive anticonvulsant compound DHA with AEDs should be favorably regarded in clinical studies of epilepsy treatment.

  10. Calorimetry of Nucleic Acids.

    Science.gov (United States)

    Rozners, Eriks; Pilch, Daniel S; Egli, Martin

    2015-12-01

    This unit describes the application of calorimetry to characterize the thermodynamics of nucleic acids, specifically, the two major calorimetric methodologies that are currently employed: differential scanning (DSC) and isothermal titration calorimetry (ITC). DSC is used to study thermally induced order-disorder transitions in nucleic acids. A DSC instrument measures, as a function of temperature (T), the excess heat capacity (C(p)(ex)) of a nucleic acid solution relative to the same amount of buffer solution. From a single curve of C(p)(ex) versus T, one can derive the following information: the transition enthalpy (ΔH), entropy (ΔS), free energy (ΔG), and heat capacity (ΔCp); the state of the transition (two-state versus multistate); and the average size of the molecule that melts as a single thermodynamic entity (e.g., the duplex). ITC is used to study the hybridization of nucleic acid molecules at constant temperature. In an ITC experiment, small aliquots of a titrant nucleic acid solution (strand 1) are added to an analyte nucleic acid solution (strand 2), and the released heat is monitored. ITC yields the stoichiometry of the association reaction (n), the enthalpy of association (ΔH), the equilibrium association constant (K), and thus the free energy of association (ΔG). Once ΔH and ΔG are known, ΔS can also be derived. Repetition of the ITC experiment at a number of different temperatures yields the ΔCp for the association reaction from the temperature dependence of ΔH.

  11. Whither acid rain?

    Science.gov (United States)

    Brimblecombe, P

    2001-04-04

    Acid rain, the environmental cause célèbre of the 1980s seems to have vanished from popular conscience. By contrast, scientific research, despite funding difficulties, has continued to produce hundreds of research papers each year. Studies of acid rain taught much about precipitation chemistry, the behaviour of snow packs, long-range transport of pollutants and new issues in the biology of fish and forested ecosystems. There is now evidence of a shift away from research in precipitation and sulfur chemistry, but an impressive theoretical base remains as a legacy.

  12. Ethylenediaminetetraacetic acid in endodontics.

    Science.gov (United States)

    Mohammadi, Zahed; Shalavi, Sousan; Jafarzadeh, Hamid

    2013-09-01

    Ethylenediaminetetraacetic acid (EDTA) is a chelating agent can bind to metals via four carboxylate and two amine groups. It is a polyamino carboxylic acid and a colorless, water-soluble solid, which is widely used to dissolve lime scale. It is produced as several salts, notably disodium EDTA and calcium disodium EDTA. EDTA reacts with the calcium ions in dentine and forms soluble calcium chelates. A review of the literature and a discussion of the different indications and considerations for its usage are presented.

  13. Locked nucleic acid

    DEFF Research Database (Denmark)

    Jepsen, Jan Stenvang; Sørensen, Mads D; Wengel, Jesper

    2004-01-01

    Locked nucleic acid (LNA) is a class of nucleic acid analogs possessing very high affinity and excellent specificity toward complementary DNA and RNA, and LNA oligonucleotides have been applied as antisense molecules both in vitro and in vivo. In this review, we briefly describe the basic...... physiochemical properties of LNA and some of the difficulties that may be encountered when applying LNA technology. The central part of the review focuses on the use of LNA molecules in regulation of gene expression, including delivery to cells, stability, unspecific effects, toxicity, pharmacokinetics...

  14. Whither Acid Rain?

    Directory of Open Access Journals (Sweden)

    Peter Brimblecombe

    2000-01-01

    Full Text Available Acid rain, the environmental cause célèbre of the 1980s seems to have vanished from popular conscience. By contrast, scientific research, despite funding difficulties, has continued to produce hundreds of research papers each year. Studies of acid rain taught much about precipitation chemistry, the behaviour of snow packs, long-range transport of pollutants and new issues in the biology of fish and forested ecosystems. There is now evidence of a shift away from research in precipitation and sulfur chemistry, but an impressive theoretical base remains as a legacy.

  15. Fatty acids of Thiobacillus thiooxidans.

    Science.gov (United States)

    Levin, R A

    1971-12-01

    Fatty acid spectra were made on Thiobacillus thiooxidans cultures both in the presence and absence of organic compounds. Small additions of glucose or acetate had no significant effect either on growth or fatty acid content. The addition of biotin had no stimulatory effect but did result in slight quantitative changes in the fatty acid spectrum. The predominant fatty acid was a C(19) cyclopropane acid.

  16. The Acid-Base Titration of a Very Weak Acid: Boric Acid

    Science.gov (United States)

    Celeste, M.; Azevedo, C.; Cavaleiro, Ana M. V.

    2012-01-01

    A laboratory experiment based on the titration of boric acid with strong base in the presence of d-mannitol is described. Boric acid is a very weak acid and direct titration with NaOH is not possible. An auxiliary reagent that contributes to the release of protons in a known stoichiometry facilitates the acid-base titration. Students obtain the…

  17. The Acid-Base Titration of a Very Weak Acid: Boric Acid

    Science.gov (United States)

    Celeste, M.; Azevedo, C.; Cavaleiro, Ana M. V.

    2012-01-01

    A laboratory experiment based on the titration of boric acid with strong base in the presence of d-mannitol is described. Boric acid is a very weak acid and direct titration with NaOH is not possible. An auxiliary reagent that contributes to the release of protons in a known stoichiometry facilitates the acid-base titration. Students obtain the…

  18. Catalytic acetoxylation of lactic acid to 2-acetoxypropionic acid, en route to acrylic acid

    NARCIS (Netherlands)

    Beerthuis, R.; Granollers, M.; Brown, D.R.; Salavagione, H.J.; Rothenberg, G.; Shiju, N.R.

    2015-01-01

    We present an alternative synthetic route to acrylic acid, starting from the platform chemical lactic acid and using heterogeneous catalysis. To improve selectivity, we designed an indirect dehydration reaction that proceeds via acetoxylation of lactic acid to 2-acetoxypropionic acid. This

  19. Lactic acid bacterial cell factories for gamma-aminobutyric acid.

    Science.gov (United States)

    Li, Haixing; Cao, Yusheng

    2010-11-01

    Gamma-aminobutyric acid is a non-protein amino acid that is widely present in organisms. Several important physiological functions of gamma-aminobutyric acid have been characterized, such as neurotransmission, induction of hypotension, diuretic effects, and tranquilizer effects. Many microorganisms can produce gamma-aminobutyric acid including bacteria, fungi and yeasts. Among them, gamma-aminobutyric acid-producing lactic acid bacteria have been a focus of research in recent years, because lactic acid bacteria possess special physiological activities and are generally regarded as safe. They have been extensively used in food industry. The production of lactic acid bacterial gamma-aminobutyric acid is safe and eco-friendly, and this provides the possibility of production of new naturally fermented health-oriented products enriched in gamma-aminobutyric acid. The gamma-aminobutyric acid-producing species of lactic acid bacteria and their isolation sources, the methods for screening of the strains and increasing their production, the enzymatic properties of glutamate decarboxylases and the relative fundamental research are reviewed in this article. And the potential applications of gamma-aminobutyric acid-producing lactic acid bacteria were also referred to.

  20. Supramolecular Photochirogenesis with a Higher-Order Complex: Highly Accelerated Exclusively Head-to-Head Photocyclodimerization of 2-Anthracenecarboxylic Acid via 2:2 Complexation with Prolinol.

    Science.gov (United States)

    Kawanami, Yuko; Katsumata, Shin-Ya; Nishijima, Masaki; Fukuhara, Gaku; Asano, Kaori; Suzuki, Takeyuki; Yang, Cheng; Nakamura, Asao; Mori, Tadashi; Inoue, Yoshihisa

    2016-09-21

    An unprecedented 2:2 complex was shown to intervene in the enantiodifferentiating photocyclodimerization of 2-anthracenecarboxylic acid (A) mediated by a hydrogen-bonding template l-prolinol (P) to accelerate the formation of chiral anti-head-to-head and achiral syn-head-to-head cyclodimers in >99% combined yield with enhanced enantioselectivities of up to 72% ee for the former. The supramolecular complexation and photochirogenic behaviors, as well as the plausible structures, of intervening Am·Pn complexes (m, n = 1 or 2) were elucidated by combined theoretical and experimental spectroscopic, photophysical, and photochemical studies. Furthermore, the photochemical chiral amplification was achieved for the first time by utilizing the preferential 2:2 complexation of A with homochiral P to give normalized product enantioselectivities higher than those of the template used. The present strategy based on the higher-order hydrogen-bonding motif, which is potentially applicable to a variety of carboxylic acids and β-aminoalcohols, is not only conceptually new and expandable to other (photo)chirogenic and sensing systems but also may serve as a versatile tool for achieving photochemical asymmetric amplification and constructing chiral functional supramolecular architectures.

  1. Optimization of transesterification conditions for the production of fatty acid methyl ester (FAME) from Chinese tallow kernel oil with surfactant-coated lipase

    Energy Technology Data Exchange (ETDEWEB)

    Gao, Yin-yu; Liu, Yuhuan; Lin, Xiangyang [Key Laboratory of Food Science, Ministry of Education, Nanchang University, Nanchang 330047 (China); Chen, Wen-wei [College of Life Science, China Jiliang University, Hangzhou 310018 (China); Lei, Hanwu [Department of Agricultural and Biosystems Engineering, South Dakota State University, Brookings, SD 57007 (United States); Ruan, Roger [Key Laboratory of Food Science, Ministry of Education, Nanchang University, Nanchang 330047 (China)]|[Department of Bioproducts and Biosystems Engineering, University of Minnesota, St. Paul, MN 55108-6005 (United States)

    2009-02-15

    Surfactant-coated lipase was used as a catalyst in preparing fatty acid methyl ester (FAME) from Chinese tallow kernel oil from Sapium sebiferum (L.) Roxb. syn. Triadica sebifera (L.) small. FAME transesterification was analyzed using response surface methodology to find out the effect of the process variables on the esterification rate and to establish prediction models. Reaction temperature and time were found to be the main factors affecting the esterification rate with the presence of surfactant-coated lipase. Developed prediction models satisfactorily described the esterification rate as a function of reaction temperature, time, dosage of surfactant-coated lipase, ratio of methanol to oil, and water content. The FAME mainly contained fatty acid esters of C16:0, C18:0, C18:1, C18:2, and C18:3, determined by a gas chromatograph. The optimal esterification rate was 93.86%. The optimal conditions for the above esterification ratio were found to be a reaction time of 9.2 h, a reaction temperature of 49 C, dosage of surfactant-coated lipase of 18.5%, a ratio of methanol to oil of 3:1, and water content of 15.6%. Thus, by using the central composite design, it is possible to determine accurate values of the transesterification parameters where maximum production of FAME occurs using the surfactant-coated lipase as a transesterification catalyst. (author)

  2. Synthesis, Structure and Fluorescence of a Copper(II) Complex [Cu2(bipy)2(Hpht)2Cl](Hpht) (bipy = 2,2'-Bipyridine, H2pht = o-Phthalic Acid)

    Institute of Scientific and Technical Information of China (English)

    LI Qiang; ZHENG Fa-Kun; CAI Li-Zhen; CHEN Wen-Tong; GUO Guo-Cong; HUANG Jin-Shun

    2005-01-01

    The title complex [Cu2(bipy)2(Hpht)2Cl](Hpht) (bipy = 2,2’-bipyridine, H2pht = o-phthalic acid) has been synthesized in the NaOH aqueous solution of CuCl2, Gd(NO3)3, bipy and H2pht, and its crystal structure was determined by single-crystal X-ray diffraction method. It crystallizes in triclinic, space group P, C44H31ClCu2N4O12, Mr = 970.26, a = 8.175(2), b = 16.254(4), c = 16.946(4) (A), α = 62.966(6), β = 84.833(8), γ = 84.348(8)°, V = 1993.4(8) (A)3, Z = 2, Dc = 1.616 g/cm3, F(000) = 988 and μ = 1.207 mm-1. The final R = 0.0429 and wR = 0.0843 for 5682 observed reflections with I > 2σ(I). Each copper(II) atom displays a distorted square-pyramidal geometry with two nitrogen atoms of one chelate 2,2’-bipy molecule, two oxygen atoms from two different bridging carboxylate groups of Hphtˉand one bridging chloride atom occupying the apical position. The two copper(II) atoms are connected by a μ2-Cl atom and two bridging Hpht- ligands in a syn-syn coordination mode to form an isolated dinuclear unit. The molecular structure is extended to a one-dimensional wavy chain through hydrogen bonds. The title complex exhibits blue fluorescent emission at 443 nm (λex = 372 nm) in the solid state at room temperature.

  3. Aminolevulinic Acid Topical

    Science.gov (United States)

    ... on or under the skin that result from exposure to sunlight and can develop into skin cancer) of the ... acid will make your skin very sensitive to sunlight (likely to get sunburn). Avoid exposure of treated skin to direct sunlight or bright ...

  4. Multifunctional Cinnamic Acid Derivatives

    Directory of Open Access Journals (Sweden)

    Aikaterini Peperidou

    2017-07-01

    Full Text Available Our research to discover potential new multitarget agents led to the synthesis of 10 novel derivatives of cinnamic acids and propranolol, atenolol, 1-adamantanol, naphth-1-ol, and (benzylamino ethan-1-ol. The synthesized molecules were evaluated as trypsin, lipoxygenase and lipid peroxidation inhibitors and for their cytotoxicity. Compound 2b derived from phenoxyphenyl cinnamic acid and propranolol showed the highest lipoxygenase (LOX inhibition (IC50 = 6 μΜ and antiproteolytic activity (IC50 = 0.425 μΜ. The conjugate 1a of simple cinnamic acid with propranolol showed the higher antiproteolytic activity (IC50 = 0.315 μΜ and good LOX inhibitory activity (IC50 = 66 μΜ. Compounds 3a and 3b, derived from methoxylated caffeic acid present a promising combination of in vitro inhibitory and antioxidative activities. The S isomer of 2b also presented an interesting multitarget biological profile in vitro. Molecular docking studies point to the fact that the theoretical results for LOX-inhibitor binding are identical to those from preliminary in vitro study.

  5. Lactic acid and lactates

    NARCIS (Netherlands)

    Schreurs, V.V.A.M.

    2010-01-01

    This review aims to integrate the present state of knowledge on lactate metabolism in human and mammalian physiology as far as it could be subject to nutritional interventions. An integrated view on the nutritional, metabolic and physiological aspects of lactic acid and lactates might open a perspec

  6. Accidents with sulfuric acid

    Directory of Open Access Journals (Sweden)

    Rajković Miloš B.

    2006-01-01

    Full Text Available Sulfuric acid is an important industrial and strategic raw material, the production of which is developing on all continents, in many factories in the world and with an annual production of over 160 million tons. On the other hand, the production, transport and usage are very dangerous and demand measures of precaution because the consequences could be catastrophic, and not only at the local level where the accident would happen. Accidents that have been publicly recorded during the last eighteen years (from 1988 till the beginning of 2006 are analyzed in this paper. It is very alarming data that, according to all the recorded accidents, over 1.6 million tons of sulfuric acid were exuded. Although water transport is the safest (only 16.38% of the total amount of accidents in that way 98.88% of the total amount of sulfuric acid was exuded into the environment. Human factor was the common factor in all the accidents, whether there was enough control of the production process, of reservoirs or transportation tanks or the transport was done by inadequate (old tanks, or the accidents arose from human factor (inadequate speed, lock of caution etc. The fact is that huge energy, sacrifice and courage were involved in the recovery from accidents where rescue teams and fire brigades showed great courage to prevent real environmental catastrophes and very often they lost their lives during the events. So, the phrase that sulfuric acid is a real "environmental bomb" has become clearer.

  7. Uric acid and evolution

    National Research Council Canada - National Science Library

    Álvarez-Lario, Bonifacio; Macarrón-Vicente, Jesús

    2010-01-01

    Uric acid (UA) is the end product of purine metabolism in humans due to the loss of uricase activity by various mutations of its gene during the Miocene epoch, which led to humans having higher UA levels than other mammals. Furthermore, 90...

  8. Acid Rain Investigations.

    Science.gov (United States)

    Hugo, John C.

    1992-01-01

    Presents an activity in which students investigate the formation of solid ammonium chloride aerosol particles to help students better understand the concept of acid rain. Provides activity objectives, procedures, sample data, clean-up instructions, and questions and answers to help interpret the data. (MDH)

  9. The Acid Rain Game.

    Science.gov (United States)

    Rakow, Steven J.; Glenn, Allen

    1982-01-01

    Provides rationale for and description of an acid rain game (designed for two players), a problem-solving model for elementary students. Although complete instructions are provided, including a copy of the game board, the game is also available for Apple II microcomputers. Information for the computer program is available from the author.…

  10. Acid Rain Classroom Projects.

    Science.gov (United States)

    Demchik, Michael J.

    2000-01-01

    Describes a curriculum plan in which students learn about acid rain through instructional media, research and class presentations, lab activities, simulations, design, and design implementation. Describes the simulation activity in detail and includes materials, procedures, instructions, examples, results, and discussion sections. (SAH)

  11. Hyaluronic Acid Assays

    DEFF Research Database (Denmark)

    Itenov, Theis S; Kirkby, Nikolai S; Bestle, Morten H

    2015-01-01

    BACKGROUD: Hyaluronic acid (HA) is proposed as a marker of functional liver capacity. The aim of the present study was to compare a new turbidimetric assay for measuring HA with the current standard method. METHODS: HA was measured by a particle-enhanced turbidimetric immunoassay (PETIA) and enzyme...

  12. Koetjapic acid chloroform hemisolvate

    Directory of Open Access Journals (Sweden)

    Z. D. Nassar

    2010-06-01

    Full Text Available The asymmetric unit of the title compound, C30H46O4·0.5CHCl3, consists of one koetjapic acid [systematic name: (3R,4aR,4bS,7S,8S,10bS,12aS-7-(2-carboxyethyl-3,4b,7,10b,12a-pentamethyl-8-(prop-1-en-2-yl-1,2,3,4,4a,4b,5,6,7,8,9,10,10b,11,12,12a-hexadecahydrochrysene-3-carboxylic acid] molecule and one half-molecule of chloroform solvent, which is disordered about a twofold rotation axis. The symmetry-independent component is further disordered over two sites, with occupancies of 0.30 and 0.20. The koetjapic acid contains a fused four-ring system, A/B/C/D. The A/B, B/C and C/D junctions adopt E/trans/cis configurations, respectively. The conformation of ring A is intermediate between envelope and half-chair and ring B adopts an envelope conformation whereas rings C and D adopt chair conformations. A weak intramolecular C—H...O hydrogen bond is observed. The koetjapic acid molecules are linked into dimers by two pairs of intermolecular O—H...O hydrogen bonds. The dimers are stacked along the c axis.

  13. Phenylpyruvic acid in urine

    NARCIS (Netherlands)

    Meulemans, O.; Vergeer, E.G.

    1960-01-01

    The method of The, Fleury And Vink for the determination of phenylpyruvic acid (PPA) in urine is modified by measuring the extinction after the green colour with ferric chloride has faded, and subtracting this extinction from that found initially. More accurate values are obtained and low PPA values

  14. Acid Rain Classroom Projects.

    Science.gov (United States)

    Demchik, Michael J.

    2000-01-01

    Describes a curriculum plan in which students learn about acid rain through instructional media, research and class presentations, lab activities, simulations, design, and design implementation. Describes the simulation activity in detail and includes materials, procedures, instructions, examples, results, and discussion sections. (SAH)

  15. The Acid Rain Game.

    Science.gov (United States)

    Rakow, Steven J.; Glenn, Allen

    1982-01-01

    Provides rationale for and description of an acid rain game (designed for two players), a problem-solving model for elementary students. Although complete instructions are provided, including a copy of the game board, the game is also available for Apple II microcomputers. Information for the computer program is available from the author.…

  16. Acid Rain Investigations.

    Science.gov (United States)

    Hugo, John C.

    1992-01-01

    Presents an activity in which students investigate the formation of solid ammonium chloride aerosol particles to help students better understand the concept of acid rain. Provides activity objectives, procedures, sample data, clean-up instructions, and questions and answers to help interpret the data. (MDH)

  17. Effect of domoic acid on brain amino acid levels.

    Science.gov (United States)

    Durán, R; Arufe, M C; Arias, B; Alfonso, M

    1995-03-01

    The administration of Domoic Acid (Dom) in a 0.2 mg/kg i.p. dose induces changes in the levels of amino acids of neurochemical interest (Asp, Glu, Gly, Tau, Ala, GABA) in different rat brain regions (hypothalamus, hippocampus, amygdala, striatum, cortex and midbrain). The most affected amino acid is the GABA, the main inhibitory amino acid neurotransmitter, whereas glutamate, the main excitatory amino acid, is not affected. The rat brain regions that seem to be the main target of the Dom action belong to the limbic system (hippocampus, amygdala). The possible implication of the amino acids in the actions of Dom is also discussed.

  18. A Direct, Biomass-Based Synthesis of Benzoic Acid: Formic Acid-Mediated Deoxygenation of the Glucose-Derived Materials Quinic Acid and Shikimic Acid

    Energy Technology Data Exchange (ETDEWEB)

    Arceo, Elena; Ellman, Jonathan; Bergman, Robert

    2010-05-03

    An alternative biomass-based route to benzoic acid from the renewable starting materials quinic acid and shikimic acid is described. Benzoic acid is obtained selectively using a highly efficient, one-step formic acid-mediated deoxygenation method.

  19. Potentiometric determination of peroxodisulfuric acid during electrolysis sulfuric acid

    Directory of Open Access Journals (Sweden)

    Fedor Malchik

    2013-09-01

    Full Text Available Was proposed two potentiometric methods for determining peroxodisulfuric acid during electrolysis of sulfuric acid (potentiometric titration method and direct potentiometry, based on its interaction with a known excess of a solution Fe2+.

  20. Progress in engineering acid stress resistance of lactic acid bacteria.

    Science.gov (United States)

    Wu, Chongde; Huang, Jun; Zhou, Rongqing

    2014-02-01

    Lactic acid bacteria (LAB) are widely used for the production of a variety of fermented foods, and are considered as probiotic due to their health-promoting effect. However, LAB encounter various environmental stresses both in industrial fermentation and application, among which acid stress is one of the most important survival challenges. Improving the acid stress resistance may contribute to the application and function of probiotic action to the host. Recently, the advent of genomics, functional genomics and high-throughput technologies have allowed for the understanding of acid tolerance mechanisms at a systems level, and many method to improve acid tolerance have been developed. This review describes the current progress in engineering acid stress resistance of LAB. Special emphasis is placed on engineering cellular microenvironment (engineering amino acid metabolism, introduction of exogenous biosynthetic capacity, and overproduction of stress response proteins) and maintaining cell membrane functionality. Moreover, strategies to improve acid tolerance and the related physiological mechanisms are also discussed.

  1. Differential Local Connectivity and Neuroinflammation Profiles in the Medial Prefrontal Cortex and Hippocampus in the Valproic Acid Rat Model of Autism.

    Science.gov (United States)

    Codagnone, Martín Gabriel; Podestá, María Fernanda; Uccelli, Nonthué Alejandra; Reinés, Analía

    2015-01-01

    Autism spectrum disorders (ASD) are a group of developmental disabilities characterized by impaired social interaction, communication deficit and repetitive and stereotyped behaviors. Neuroinflammation and synaptic alterations in several brain areas have been suggested to contribute to the physiopathology of ASD. Although the limbic system plays an important role in the functions found impaired in ASD, reports on these areas are scarce and results controversial. In the present study we searched in the medial prefrontal cortex (mPFC) and hippocampus of rats exposed to the valproic acid (VPA) model of ASD for early structural and molecular changes, coincident in time with the behavioral alterations. After confirming delayed growth and maturation in VPA rats, we were able to detect decreased exploratory activity and social interaction at an early time point (postnatal day 35). In mPFC, although typical cortical column organization was preserved in VPA animals, we found that interneuronal space was wider than in controls. Hippocampal CA3 (cornu ammonis 3) pyramidal layer and the granular layer of the dentate gyrus both showed a disorganized spatial arrangement in VPA animals. Neuronal alterations were accompanied with increased tomato lectin and glial fibrillary acidic protein (GFAP) immunostainings both in the mPFC and hippocampus. In the latter region, the increased GFAP immunoreactivity was CA3 specific. At the synaptic level, while mPFC from VPA animals showed increased synaptophysin (SYN) immunostaining, a SYN deficit was found in all hippocampal subfields. Additionally, both the mPFC and the hippocampus of VPA rats showed increased neuronal cell adhesion molecule (NCAM) immunostaining together with decreased levels of its polysialylated form (PSA-NCAM). Interestingly, these changes were more robust in the CA3 hippocampal subfield. Our results indicate that exploratory and social deficits correlate with region-dependent neuronal disorganization and reactive

  2. Effect of phenolic acids on glucose and organic acid metabolism by lactic acid bacteria from wine.

    Science.gov (United States)

    Campos, Francisco M; Figueiredo, Ana R; Hogg, Tim A; Couto, José A

    2009-06-01

    The influence of phenolic (p-coumaric, caffeic, ferulic, gallic and protocatechuic) acids on glucose and organic acid metabolism by two strains of wine lactic acid bacteria (Oenococcus oeni VF and Lactobacillus hilgardii 5) was investigated. Cultures were grown in modified MRS medium supplemented with different phenolic acids. Cellular growth was monitored and metabolite concentrations were determined by HPLC-RI. Despite the strong inhibitory effect of most tested phenolic acids on the growth of O. oeni VF, the malolactic activity of this strain was not considerably affected by these compounds. While less affected in its growth, the capacity of L. hilgardii 5 to degrade malic acid was clearly diminished. Except for gallic acid, the addition of phenolic acids delayed the metabolism of glucose and citric acid in both strains tested. It was also found that the presence of hydroxycinnamic acids (p-coumaric, caffeic and ferulic) increased the yield of lactic and acetic acid production from glucose by O. oeni VF and not by L. hilgardii 5. The results show that important oenological characteristics of wine lactic acid bacteria, such as the malolactic activity and the production of volatile organic acids, may be differently affected by the presence of phenolic acids, depending on the bacterial species or strain.

  3. [Determination of scopolin, chlorogenic acid, scopoletin, isochlorogenic acid A, isochlorogenic acid B and isochlorogenic acid C in plants of Erycibe].

    Science.gov (United States)

    Xu, Xiao-kun; Chen, Zhi-yong; Liao, Li-ping; Zhang, Zi-jia; Wang, Zheng-tao

    2015-03-01

    An accurate and reliable analytical method for-simultaneous determination of six active components (scopolin, chlorogenic acid, scopoletin, isochlorogenic acid A, isochlorogenic acid B and isochlorogenic acid C) in plants of Erycibe was developed. Scopolin, chlorogenic acid, scopoletin, isochlorogenic acid A, isochlorogenic acid B and isochlorogenic acid C in the samples were well separated in analytical HPLC by gradual elution with methanol-0.1% formic acid solution. The chromatographic condictions: Agilent Poroshell 120 EC-C18 column, flowing rate being 1 mL x min(-1), detecting wavelength at 345 nm. Good linearities of scopolin, chlorogenic acid, scopoletin, isochlorogenic acid A, isochlorogenic acid B and isochlorogenic acid C were in the range of 0.026 8-2.68, 0.027 0-2.70, 0.008 1-0.81, 0.018 8-1.88, 0.017 6-1.76, 0.019 6-1.96 μg, respectively (r > 0.999 6). The average recoveries of the six components were 98.1%, 98.7%, 100.8%, 100.4%, 99.7%, 101.1%; the relative standard deviations were 2.67%, 2.86%, 2.62%, 1.98%, 2.76%, 2.19%. The method is simple, feasible and reproducible and can be used for the quality control of plants of Erycibe.

  4. Usnic acid controls the acidity tolerance of lichens.

    Science.gov (United States)

    Hauck, Markus; Jürgens, Sascha-René

    2008-11-01

    The hypotheses were tested that, firstly, lichens producing the dibenzofuran usnic acid colonize substrates characterized by specific pH ranges, secondly, this preferred pH is in a range where soluble usnic acid and its corresponding anion occur in similar concentrations, and thirdly, usnic acid makes lichens vulnerable to acidity. Lichens with usnic acid prefer an ambient pH range between 3.5 and 5.5 with an optimum between 4.0 and 4.5. This optimum is close to the pK(a1) value of usnic acid of 4.4. Below this optimum pH, dissolved SO(2) reduces the chlorophyll fluorescence yield more in lichens with than without their natural content of usnic acid. This suggests that usnic acid influences the acidity tolerance of lichens. The putative mechanism of the limited acidity tolerance of usnic acid-containing lichens is the acidification of the cytosol by molecules of protonated usnic acid shuttling protons through the plasma membrane at an apoplastic pH

  5. Circulating folic acid in plasma: relation to folic acid fortification

    Science.gov (United States)

    The implementation of folic acid fortification in the United States has resulted in unprecedented amounts of this synthetic form of folate in the American diet. Folic acid in circulation may be a useful measure of physiologic exposure to synthetic folic acid, and there is a potential for elevated co...

  6. Acetic acid extraction from aqueous solutions using fatty acids

    NARCIS (Netherlands)

    IJmker, H.M.; Gramblicka, M.; Kersten, Sascha R.A.; van der Ham, Aloysius G.J.; Schuur, Boelo

    2014-01-01

    A major challenge for production of acetic acid via bio-based routes is cost-effective concentration and purification of the acetic acid from the aqueous solutions, for which liquid–liquid extraction is a possible method. A main challenge in extraction of acetic acid from dilute aqueous solutions is

  7. Acetic acid extraction from aqueous solutions using fatty acids

    NARCIS (Netherlands)

    IJmker, H.M.; Gramblicka, M.; Kersten, S.R.A.; Ham, van der A.G.J.; Schuur, B.

    2014-01-01

    A major challenge for production of acetic acid via bio-based routes is cost-effective concentration and purification of the acetic acid from the aqueous solutions, for which liquid–liquid extraction is a possible method. A main challenge in extraction of acetic acid from dilute aqueous solutions is

  8. N-(3-Chlorophenylmaleamic acid

    Directory of Open Access Journals (Sweden)

    B. Thimme Gowda

    2010-07-01

    Full Text Available In the title compound, C10H8ClNO3, the molecular conformation is stabilized by two intramolecular hydrogen bonds. The first is a short O—H...O hydrogen bond within the maleamic acid unit and the second is a C—H...O hydrogen bond which connects the amide group with the phenyl ring. The maleamic acid unit is essentially planar, with an r.m.s. deviation of 0.044 Å, and makes a dihedral angle of 15.2 (1° with the phenyl ring. In the crystal, intermolecular N—H...O hydrogen bonds link the molecules into C(7 chains running [010].

  9. Acid hydrolysis of cellulose

    Energy Technology Data Exchange (ETDEWEB)

    Salazar, H.

    1980-12-01

    One of the alternatives to increase world production of etha nol is by the hydrolysis of cellulose content of agricultural residues. Studies have been made on the types of hydrolysis: enzimatic and acid. Data obtained from the sulphuric acid hydrolysis of cellulose showed that this process proceed in two steps, with a yield of approximately 95% glucose. Because of increases in cost of alternatives resources, the high demand of the product and the more economic production of ethanol from cellulose materials, it is certain that this technology will be implemented in the future. At the same time further studies on the disposal and reuse of the by-products of this production must be undertaken.

  10. Autohydrolysis of phytic acid.

    Science.gov (United States)

    Hull, S R; Gray, J S; Montgomery, R

    1999-09-10

    The autohydrolysis of phytic acid at 120 degrees C resulted in the formation of most of the phosphate esters of myo-inositol in varying amounts depending upon the reaction time. Eighteen of the 39 chromatographically distinct myo-inositol mono-, bis-, tris-, tetrakis-, pentakis-, and hexakisphosphates have been characterized using two different HPLC systems. These myo-inositol phosphates were partially purified by preparative anion-exchange chromatography under acidic and alkaline elution conditions. The combination of these two methods provides a two-tiered chromatographic approach to the rapid and sensitive identification of inositol phosphates in complex mixtures. Identification of the products was confirmed by 1D and 2D (1)H NMR analysis. The analytical procedure was applied to the autohydrolysis of the mixture of inositol phosphates from corn steep water.

  11. Accidents with sulfuric acid

    OpenAIRE

    Rajković Miloš B.

    2006-01-01

    Sulfuric acid is an important industrial and strategic raw material, the production of which is developing on all continents, in many factories in the world and with an annual production of over 160 million tons. On the other hand, the production, transport and usage are very dangerous and demand measures of precaution because the consequences could be catastrophic, and not only at the local level where the accident would happen. Accidents that have been publicly recorded during the last eigh...

  12. Phenolic acids bioavailability

    OpenAIRE

    2011-01-01

    The daily intake of phenolic compounds does not necessarily reflect the dose at which they reach the physiological targets in the organisms. The biological activity of phenolic compounds metabolites found in blood, organs and target tissues, as a result of digestive and hepatic activity, may differ from those of the native forms of the substances. This review discusses the absorption and metabolism of phenolic acids, a class of phenolic compounds abundant in food, and the methodologies used f...

  13. Omega-3 fatty acids (image)

    Science.gov (United States)

    Omega-3 fatty acids are a form of polyunsaturated fat that the body derives from food. Omega-3s (and omega-6s) are known as essential fatty acids (EFAs) because they are important for good health. ...

  14. Folic Acid Questions and Answers

    Science.gov (United States)

    ... What effect does taking folic acid have on arsenic poisoning? In many countries in the world, arsenic in ... What effect does taking folic acid have on arsenic poisoning? In many countries in the world, arsenic in ...

  15. Bile acids for viral hepatitis

    DEFF Research Database (Denmark)

    Chen, Weikeng; Liu, J; Gluud, C

    2007-01-01

    Trials have assessed bile acids for patients with viral hepatitis, but no consensus has been reached regarding their usefulness.......Trials have assessed bile acids for patients with viral hepatitis, but no consensus has been reached regarding their usefulness....

  16. (boric acid) against Blattella germanica

    African Journals Online (AJOL)

    ufuoma

    2013-05-01

    May 1, 2013 ... study of the ovaries was done following the toxicity assays after having evaluated the toxicity of the boric acid ... Key words: German cockroach, boric acid, reproduction, ovary, biochemical. ... MATERIALS AND METHODS.

  17. IRMPD spectroscopy of protonated S-nitrosocaptopril, a biologically active, synthetic amino acid.

    Science.gov (United States)

    Coletti, Cecilia; Re, Nazzareno; Scuderi, Debora; Maître, Philippe; Chiavarino, Barbara; Fornarini, Simonetta; Lanucara, Francesco; Sinha, Rajeev K; Crestoni, Maria Elisa

    2010-11-07

    S-Nitrosocaptopril, a biologically active S-nitrosothiol, is generated as protonated species and isolated in the gas phase by electrospray ionization coupled to Fourier Transform Ion Cyclotron Resonance (FT-ICR) or ion-trap mass spectrometry. The structural and IR spectroscopic characterization of protonated S-nitrosocaptopril (SNOcapH(+)) is aided by the comparative study of the parent species lacking the NO feature, namely protonated captopril. The study is accomplished by methodologies based on tandem mass spectrometry, namely by energy resolved collision-induced dissociation and infrared multiple-photon dissociation (IRMPD) spectroscopy, backed by density functional theory calculations. IRMPD spectra have been obtained both in the 1000-1900 cm(-1) fingerprint range, using a beamline of the infrared free electron laser (IR-FEL) at the Centre Laser Infrarouge d'Orsay (CLIO), and in the O-H and N-H stretching region (2900-3700 cm(-1)) using the tunable IR radiation of a tabletop parametric oscillator/amplifier (OPO/OPA) laser source. The structural features of the ion have been ascertained by comparison of the experimental IRMPD spectra with the IR transitions calculated for the lowest energy isomers. Evidence is obtained that protonation occurs at the amide carbonyl oxygen which is found to be the thermodynamically most basic site. However, SNOcapH(+) is present as a thermally equilibrated mixture of low-energy structures, with a major contribution of the most stable isomer characterized by a trans relationship of the positively charged OH group with respect to the carboxylic acid functionality on the adjacent proline ring and by an anti conformation at the S-N (partial) double bond, though the energy difference with the analogous trans-syn isomer is less than 1 kJ mol(-1). The highly diagnostic N-O stretching mode has been unambiguously identified, which may be regarded as an informative probe for S-nitrosation features in more complex, biologically active

  18. Enzymic Synthesis of Caffeoylglucaric Acid from Chlorogenic Acid and Glucaric Acid by a Protein Preparation from Tomato Cotyledons 1

    Science.gov (United States)

    Strack, Dieter; Gross, Wiltrud; Wray, Victor; Grotjahn, Lutz

    1987-01-01

    The phenylpropane metabolism of tomato (Lycopersicon esculentum Mill) cotyledons was investigated. The HPLC analysis revealed two hydroxycinnamic-acid conjugates as major components, identified as chlorogenic acid (5-O-caffeoylquinic acid) and caffeoylglucaric acid (2-O- or 5-O-caffeoyl-glucaric acid). Quantitative analyses indicated a precursor-product relationship between the chlorogenic and caffeoylglucaric acids. Protein preparations from tomato cotyledons were found to catalyze the formation of caffeoylglucaric acid with chlorogenic acid as acyl donor and free glucaric acid as acceptor molecule. This enzyme activity, possibly to be classified as hydroxycinnamoylquinic acid:glucaric acid hydroxycinnamoyltransferase, acts together with hydroxycinnamoyl-CoA: quinic acid hydroxycinnamoyltransferase. PMID:16665274

  19. Biological properties of lipoic acid

    Directory of Open Access Journals (Sweden)

    Anna Bilska

    2002-06-01

    Full Text Available Lipoic acid is a prostetic group of H-protein of the glycine cleavage system and the dihydrolipoamide acyltransferases (E2 of the pyruvate, alpha-ketoglutarate and branched-chain alpha-keto acid dehydrogenase complexes. Lipoic acid and its reduced form, dihydrolipoic acid, reacts with oxygen reactive species. This paper reviews the beneficial effects in oxidative stress models or clinical conditions.

  20. Lewis Acid Catalyzed Benzylic Bromination

    OpenAIRE

    Shibatomi, Kazutaka; Zhang, Yanhua; Yamamoto, Hisashi

    2008-01-01

    Lewis acid catalyzed bromination on aromatic side chain was achieved efficiently by using 1,3-dibromo-5,5-dimethylhydantoin (DBDMH) as a bromination reagent under mild conditions. Zirconium(IV) chloride showed the highest catalytic activity for the benzylic bromination. It was revealed that the present Lewis acid catalysis proceeds via the radical generation pathway. In contrast to Lewis acid catalysis, Brønsted acid promoted aromatic ring bromination without any benzylic bromination. Monobro...

  1. LACTIC ACID BACTERIA: PROBIOTIC APPLICATIONS

    OpenAIRE

    NEENA GARG

    2015-01-01

    Lactic acid bacteria (LAB) is a heterotrophic Gram-positive bacteria which under goes lactic acid fermentations and leads to production of lactic acid as an end product. LAB includes Lactobacillus, Leuconostoc, Pediococcus, Lactococcus and Streptococcus which are grouped together in the family lactobacillaceae. LAB shows numerous antimicrobial activities due to production of antibacterial and antifungal compounds such as organic acids, bacteriocins, diacetyl, hydrogen peroxide and reutrin. LA...

  2. Acids and bases solvent effects on acid-base strenght

    CERN Document Server

    Cox, Brian G

    2013-01-01

    Acids and bases are ubiquitous in chemistry. Our understanding of them, however, is dominated by their behaviour in water. Transfer to non-aqueous solvents leads to profound changes in acid-base strengths and to the rates and equilibria of many processes: for example, synthetic reactions involving acids, bases and nucleophiles; isolation of pharmaceutical actives through salt formation; formation of zwitter- ions in amino acids; and chromatographic separation of substrates. This book seeks to enhance our understanding of acids and bases by reviewing and analysing their behaviour in non-aqueous solvents. The behaviour is related where possible to that in water, but correlations and contrasts between solvents are also presented.

  3. Fumaric acid production by fermentation

    NARCIS (Netherlands)

    Roa Engel, C.A.; Straathof, A.J.J.; Zijlmans, T.W.; Van Gulik, W.M.; Van der Wielen, L.A.M.

    2008-01-01

    Abstract The potential of fumaric acid as a raw material in the polymer industry and the increment of cost of petroleum-based fumaric acid raises interest in fermentation processes for production of this compound from renewable resources. Although the chemical process yields 112% w/w fumaric acid fr

  4. Pantothenic acid biosynthesis in zymomonas

    Energy Technology Data Exchange (ETDEWEB)

    Tao, Luan; Tomb, Jean-Francois; Viitanen, Paul V.

    2014-07-01

    Zymomonas is unable to synthesize pantothenic acid and requires this essential vitamin in growth medium. Zymomonas strains transformed with an operon for expression of 2-dehydropantoate reductase and aspartate 1-decarboxylase were able to grow in medium lacking pantothenic acid. These strains may be used for ethanol production without pantothenic acid supplementation in seed culture and fermentation media.

  5. Acid Rain Limits Global Warming

    Institute of Scientific and Technical Information of China (English)

    Will Knight; 张林玲

    2004-01-01

    @@ Acid rain restricts global warming by reducing methane① emissions from natural wetland areas, suggests a global climate study. Acid rain is the result of industrial pollution,which causes rainwater to carry small quantities of acidic compoumds② such as sulphuric and nitric acid③. Contaminated rainwater can upset rivers and lakes, killing fish and other organisms and also damage plants, trees and buildings.

  6. Microbial degradation of poly(amino acid)s.

    Science.gov (United States)

    Obst, Martin; Steinbüchel, Alexander

    2004-01-01

    Natural poly(amino acid)s are a group of poly(ionic) molecules (ionomers) with various biological functions and putative technical applications and play, therefore, an important role both in nature and in human life. Because of their biocompatibility and their synthesis from renewable resources, poly(amino acid)s may be employed for many different purposes covering a broad spectrum of medical, pharmaceutical, and personal care applications as well as the domains of agriculture and of environmental applications. Biodegradability is one important advantage of naturally occurring poly(amino acid)s over many synthetic polymers. The intention of this review is to give an overview about the enzyme systems catalyzing the initial steps in poly(amino acid) degradation. The focus is on the naturally occurring poly(amino acid)s cyanophycin, poly(epsilon-L-lysine) and poly(gamma-glutamic acid); but biodegradation of structurally related synthetic polyamides such as poly(aspartic acid) and nylons, which are known from various technical applications, is also included.

  7. Molecular Interaction of Pinic Acid with Sulfuric Acid

    DEFF Research Database (Denmark)

    Elm, Jonas; Kurten, Theo; Bilde, Merete

    2014-01-01

    We investigate the molecular interactions between the semivolatile α-pinene oxidation product pinic acid and sulfuric acid using computational methods. The stepwise Gibbs free energies of formation have been calculated utilizing the M06-2X functional, and the stability of the clusters is evaluated...... from the corresponding ΔG values. The first two additions of sulfuric acid to pinic acid are found to be favorable with ΔG values of -9.06 and -10.41 kcal/mol. Addition of a third sulfuric acid molecule is less favorable and leads to a structural rearrangement forming a bridged sulfuric acid-pinic acid...... cluster. The involvement of more than one pinic acid molecule in a single cluster is observed to lead to the formation of favorable (pinic acid)2(H2SO4) and (pinic acid)2(H2SO4)2 clusters. The identified most favorable growth paths starting from a single pinic acid molecule lead to closed structures...

  8. Heterogeneous uptake of amines by citric acid and humic acid.

    Science.gov (United States)

    Liu, Yongchun; Ma, Qingxin; He, Hong

    2012-10-16

    Heterogeneous uptake of methylamine (MA), dimethylamine (DMA), and trimethylamine (TMA) onto citric acid and humic acid was investigated using a Knudsen cell reactor coupled to a quadrupole mass spectrometer at 298 K. Acid-base reactions between amines and carboxylic acids were confirmed. The observed uptake coefficients of MA, DMA, and TMA on citric acid at 298 K were measured to be 7.31 ± 1.13 × 10(-3), 6.65 ± 0.49 × 10(-3), and 5.82 ± 0.68 × 10(-3), respectively, and showed independence of sample mass. The observed uptake coefficients of MA, DMA, and TMA on humic acid at 298 K increased linearly with sample mass, and the true uptake coefficients of MA, DMA, and TMA were measured to be 1.26 ± 0.07 × 10(-5), 7.33 ± 0.40 × 10(-6), and 4.75 ± 0.15 × 10(-6), respectively. Citric acid, having stronger acidity, showed a higher reactivity than humic acid for a given amine; while the steric effect of amines was found to govern the reactivity between amines and citric acid or humic acid.

  9. Syn-collisional exhumation of Sumdo eclogite in the Lhasa Terrane, Tibet: Evidences from structural deformation and 40Ar-39Ar geochronology.%拉萨地体内松多榴辉岩的同碰撞折返:来自构造变形和40Ar-39Ar年代学的证据

    Institute of Scientific and Technical Information of China (English)

    李化启; 许志琴; 杨经绥; 唐哲民; 杨梅

    2011-01-01

    松多地区的区域构造变形与糜棱质白云母石英片岩和绿片岩的白云母单矿物40Ar-39Ar年代学测试表明拉萨地体内的松多地区于220~240 Ma经历过印支期碰撞造山事件.这次造山事件为晚二叠世松多榴辉岩带代表的古特提斯洋盆消失闭合之后北拉萨地体与南冈瓦那大陆碰撞的结果.该区榴辉岩与退变榴辉岩白云母和角闪石的40Ar-39Ar测年结果也为220~240 Ma,且退变榴辉岩经历了与围岩一致的同构造变形,说明榴辉岩折返退变的时代和碰撞造山的时代一致.即碰撞造山的强挤压及挤压转换作用应是本区榴辉岩折返出露的主要机制.拉萨地体内印支晚期(210~190 Ma)大规模花岗岩带的发育从另一个侧面说明松多榴辉岩的折返与造山后伸展和区域内大规模花岗岩浆活动等后期热事件没关系,应为同碰撞折返机制.研究结果为高压变质岩石的同碰撞折返研究提供了一个具体实例和翔实的地质资料.%The structural deformation and muscovite and amphibole 40Ar-39Ar dating of muscovite quartz schist,eclogite and retrograde eclogite indicate that an Indosinian orogenesis occurred in 220 - 240 Ma in the Lhasa Terrane, which caused the closure of Paleo-Tethys ocean basin and the collision between the northern Lhasa Terrane and southern Gondwana. The accordance of muscovite and amphibole 40Ar-39Ar dating among eclogite,retrograde eclogite and muscovite quartz schist shows that the eclogite exhumation and Indosinian collisional orogenesis occurred simultaneously, which suggests that the regional ductile extrusion should be the main mechanism for the exhumation of Sumdo eclogite. The existence of large scale granite belt of late Indochina EPoch in the Lhasa Terrane, with the high precision single zircon U-Pb ages of 210 - 190 Ma, confirms the syn-collisional exhumation of eclogite from the another side, indicating that the eclogite exhumation had no relation to the

  10. Microbial transformations of isocupressic acid.

    Science.gov (United States)

    Lin, S J; Rosazza, J P

    1998-07-01

    Microbial transformations of the labdane-diterpene isocupressic acid (1) with different microorganisms yielded several oxygenated metabolites that were isolated and characterized by MS and NMR spectroscopic analyses. Nocardia aurantia (ATCC 12674) catalyzed the cleavage of the 13,14-double bond to yield a new nor-labdane metabolite, 2. Cunninghamella elegans (-) (NRRL 1393) gave 7beta-hydroxyisocupressic acid (3) and labda-7,13(E)-diene-6beta,15, 17-triol-19-oic acid (4), and Mucor mucedo (ATCC 20094) gave 2alpha-hydroxyisocupressic acid (5) and labda-8(17),14-diene-2alpha, 13-diol-19-oic acid (6).

  11. Amino Acid Catabolism in Plants.

    Science.gov (United States)

    Hildebrandt, Tatjana M; Nunes Nesi, Adriano; Araújo, Wagner L; Braun, Hans-Peter

    2015-11-02

    Amino acids have various prominent functions in plants. Besides their usage during protein biosynthesis, they also represent building blocks for several other biosynthesis pathways and play pivotal roles during signaling processes as well as in plant stress response. In general, pool sizes of the 20 amino acids differ strongly and change dynamically depending on the developmental and physiological state of the plant cell. Besides amino acid biosynthesis, which has already been investigated in great detail, the catabolism of amino acids is of central importance for adjusting their pool sizes but so far has drawn much less attention. The degradation of amino acids can also contribute substantially to the energy state of plant cells under certain physiological conditions, e.g. carbon starvation. In this review, we discuss the biological role of amino acid catabolism and summarize current knowledge on amino acid degradation pathways and their regulation in the context of plant cell physiology.

  12. Acidic aerosol in urban air

    Energy Technology Data Exchange (ETDEWEB)

    Fukuda, M.; Yamaoka, S.; Miyazaki, T.; Oka, M.

    1982-01-01

    The distribution and chemical composition of acidic aerosol in Osaka City were investigated. Samples were collected at five sites in the city from June to September, 1979. Acidic aerosol was determined by the acid-base titration method, sulfate ion by barium chloride turbidimetry, nitrate ion by the xylenol method, and chloride ion by the mercury thiocyanate method. The concentration of acidic aerosol at five sites ranged from 7.7 micrograms per cubic meter to 10.0 micrograms per cubic meter, but mean concentrations in the residential area were slightly higher than those in the industrial area. When acidic aerosol concentrations were compared with concentrations of sulfate, nitrate, and chloride ions, a significant correlation was found between acidic aerosol and sulfate ion. The sum of the ion equivalents of the three types showed good correlation with the acidic aerosol equivalent during the whole period.

  13. Nucleic Acid Vaccines

    Institute of Scientific and Technical Information of China (English)

    LU Shan

    2004-01-01

    @@ Anew method of immunization was discovered in the early 1990s. Several research groups independently demonstrated that direct inoculation of DNA plasmids coding for a specific protein antigen could elicit immune responses against that antigen[1-4].Since in theory the mRNA molecules also have the potential to be translated into the protein antigen, this vaccination approach was officially named by WHO as the nucleic acid vaccination even though the term DNA vaccine has been used more commonly in the literature. This novel approach is considered the fourth generation of vaccines after live attenuated vaccines, killed or inactivated vaccines and recombinant protein based subunit vaccines.

  14. Mycophenolic Acid in Silage

    Science.gov (United States)

    Schneweis, Isabell; Meyer, Karsten; Hörmansdorfer, Stefan; Bauer, Johann

    2000-01-01

    We examined 233 silage samples and found that molds were present in 206 samples with counts between 1 × 103 and 8.9 × 107 (mean, 4.7 × 106) CFU/g. Mycophenolic acid, a metabolite of Penicillium roqueforti, was detected by liquid chromatography-mass spectrometry in 74 (32%) of these samples at levels ranging from 20 to 35,000 (mean, 1,400) μg/kg. This compound has well-known immunosuppressive properties, so feeding with contaminated silage may promote the development of infectious diseases in livestock. PMID:10919834

  15. New Acid Combination for a Successful Sandstone Acidizing

    Science.gov (United States)

    Shafiq, M. U.; Mahmud, H. K. B.; Rezaee, R.

    2017-05-01

    With the development of new enhanced oil recovery techniques, sandstone acidizing has been introduced and played a pivotal role in the petroleum industry. Different acid combinations have been applied, which react with the formation, dissolve the soluble particles; thus increase the production of hydrocarbons. To solve the problems which occurred using current preflush sandstone acidizing technology (hydrochloric acid); a new acid combination has been developed. Core flooding experiments on sandstone core samples with dimensions 1.5 in. × 3 in. were conducted at a flow rate of 2 cm3/min. A series of hydrochloric-acetic acid mixtures with different ratios were tested under 150°F temperature. The core flooding experiments performed are aimed to dissolve carbonate, sodium, potassium and calcium particles from the core samples. These experiments are followed by few important tests which include, porosity-permeability, pH value, Inductively Coupled Plasma (ICP) analysis and Nuclear Magnetic Resonance (NMR measurements). All the results are compared with the results of conventional hydrochloric acid technology. NMR and porosity analysis concluded that the new acid combination is more effective in creating fresh pore spaces and thus increasing the reservoir permeability. It can be seen from the pore distribution before and after the acidizing. Prior applying acid; the large size of pores appears most frequently in the pore distribution while with the applied acid, it was found that the small pore size is most the predominant of the pore distribution. These results are validated using ICP analysis which shows the effective removal of calcium and other positive ions from the core sample. This study concludes that the combination of acetic-hydrochloric acid can be a potential candidate for the preflush stage of sandstone acidizing at high temperature reservoirs.

  16. Bicyclic glutamic acid derivatives.

    Science.gov (United States)

    Meyer, Udo; Bisel, Philippe; Weckert, Edgar; Frahm, August Wilhelm

    2006-05-15

    For the second-generation asymmetric synthesis of the trans-tris(homoglutamic) acids via Strecker reaction of chiral ketimines, the cyanide addition as the key stereodifferentiating step produces mixtures of diastereomeric alpha-amino nitrile esters the composition of which is independent of the reaction temperature and the type of the solvent, respectively. The subsequent hydrolysis is exclusively achieved with concentrated H(2)SO(4) yielding diastereomeric mixtures of three secondary alpha-amino alpha-carbamoyl-gamma-esters and two diastereomeric cis-fused angular alpha-carbamoyl gamma-lactams as bicyclic glutamic acid derivatives, gained from in situ stereomer differentiating cyclisation of the secondary cis-alpha-amino alpha-carbamoyl-gamma-esters. Separation was achieved by CC. The pure secondary trans-alpha-amino alpha-carbamoyl-gamma-esters cyclise on heating and treatment with concentrated H(2)SO(4), respectively, to diastereomeric cis-fused angular secondary alpha-amino imides. Their hydrogenolysis led to the enantiomeric cis-fused angular primary alpha-amino imides. The configuration of all compounds was completely established by NMR methods, CD-spectra, and by X-ray analyses of the (alphaR,1R,5R)-1-carbamoyl-2-(1-phenylethyl)-2-azabicyclo[3.3.0]octan-3-one and of the trans-alphaS,1S,2R-2-ethoxycarbonylmethyl-1-(1-phenylethylamino)cyclopentanecarboxamide.

  17. Cryoprotection from lipoteichoic acid

    Science.gov (United States)

    Rice, Charles V.; Middaugh, Amy; Wickham, Jason R.; Friedline, Anthony; Thomas, Kieth J.; Johnson, Karen; Zachariah, Malcolm; Garimella, Ravindranth

    2012-10-01

    Numerous chemical additives lower the freezing point of water, but life at sub-zero temperatures is sustained by a limited number of biological cryoprotectants. Antifreeze proteins in fish, plants, and insects provide protection to a few degrees below freezing. Microbes have been found to survive at even lower temperatures, and with a few exceptions, antifreeze proteins are missing. Survival has been attributed to external factors, such as the high salt concentration of brine veins and adhesion to particulates or ice crystal defects. We have discovered an endogenous cryoprotectant in the cell wall of bacteria, lipoteichoic acid biopolymers. Adding 1% LTA to bacteria cultures immediately prior to freezing provides 50% survival rate, similar to the results obtained with 1% glycerol. In the absence of an additive, bacterial survival is negligible as measured with the resazurin cell viability assay. The mode of action for LTA cryoprotection is unknown. With a molecular weight of 3-5 kDa, it is unlikely to enter the cell cytoplasm. Our observations suggest that teichoic acids could provide a shell of liquid water around biofilms and planktonic bacteria, removing the need for brine veins to prevent bacterial freezing.

  18. Acid Ceramidase in Melanoma

    DEFF Research Database (Denmark)

    Realini, Natalia; Palese, Francesca; Pizzirani, Daniela

    2016-01-01

    Acid ceramidase (AC) is a lysosomal cysteine amidase that controls sphingolipid signaling by lowering the levels of ceramides and concomitantly increasing those of sphingosine and its bioactive metabolite, sphingosine 1-phosphate. In the present study, we evaluated the role of AC-regulated sphing......Acid ceramidase (AC) is a lysosomal cysteine amidase that controls sphingolipid signaling by lowering the levels of ceramides and concomitantly increasing those of sphingosine and its bioactive metabolite, sphingosine 1-phosphate. In the present study, we evaluated the role of AC......-regulated sphingolipid signaling in melanoma. We found that AC expression is markedly elevated in normal human melanocytes and proliferative melanoma cell lines, compared with other skin cells (keratinocytes and fibroblasts) and non-melanoma cancer cells. High AC expression was also observed in biopsies from human...... generate lower amounts of ceramides than normal melanocytes do. This down-regulation in ceramide production appears to result from suppression of the de novo biosynthesis pathway. To test whether AC might contribute to melanoma cell proliferation, we blocked AC activity using a new potent (IC50 = 12 n...

  19. Kinetics of wet oxidation of formic acid and acetic acid

    Energy Technology Data Exchange (ETDEWEB)

    Shende, R.V.; Mahajani, V.V. [Univ. of Mumbai (India). Dept. of Chemical Technology

    1997-11-01

    Oxidation of lower molecular weight carboxylic acids such as formic, acetic, glyoxalic, and oxalic acids is often the rate-controlling step during wet oxidation (WO) of an aqueous waste stream exhibiting very high chemical oxygen demand (COD). The kinetics of WO of formic acid was studied in the absence and presence of a cupric sulfate as catalyst in the temperature range 150--240 C and oxygen partial pressure range 0.345--1.380 MPa. Wet oxidation of acetic acid was carried out in the presence of cupric sulfate in the temperature range 215--235 C. Homogeneous copper sulfate was found to be a very good catalyst for oxidation of formic acid and acetic acid.

  20. Solid acid catalysis from fundamentals to applications

    CERN Document Server

    Hattori, Hideshi

    2014-01-01

    IntroductionTypes of solid acid catalystsAdvantages of solid acid catalysts Historical overviews of solid acid catalystsFuture outlookSolid Acids CatalysisDefinition of acid and base -Brnsted acid and Lewis acid-Acid sites on surfacesAcid strengthRole of acid sites in catalysisBifunctional catalysisPore size effect on catalysis -shape selectivity-Characterization of Solid Acid Catalysts Indicator methodTemperature programmed desorption (TPD) of ammoniaCalorimetry of adsorption of basic moleculesInfrare

  1. Japodic Acid, A Novel Aliphatic Acid from Jatropha podagrica Hook

    OpenAIRE

    Aiyelaagbe, Olapeju O.; Gloer, James B.

    2008-01-01

    A new aliphatic acid named japodic acid (1) with a gem-dimethyl cyclopropane ring has been isolated from the roots of Jatropha podagrica. Its structure was established by 1D and 2D NMR and mass spectrometric data. Two other known compounds, erythrinasinate (2) and fraxidin (3) were also isolated from this plant for the first time. Japodic acid showed mild insect growth inhibition activity against Helicoverpa zea (37% growth reduction at 100 ppm). Fraxidin and erythrinasinate exhibited antibac...

  2. Electrolytic nature of aqueous sulfuric acid. 2. Acidity.

    Science.gov (United States)

    Fraenkel, Dan

    2012-09-27

    In part 1 of this study, I reported that the Debye-Hückel limiting law and the smaller-ion shell (SiS) model of strong electrolyte solutions fit nicely with the experimental mean ionic activity coefficient (γ(±)) of aqueous sulfuric acid as a function of concentration and of temperature when the acid is assumed to be a strong 1-3 electrolyte. Here, I report that the SiS-derived activity coefficient of H(+), γ(H(+)), of the 1-3 acid is comparable to that of aqueous HCl. This agrees with titration curves showing, as well-known, that sulfuric acid in water is parallel in strength to aqueous HCl. The calculated pH is in good accord with the Hammett acidity function, H(0), of aqueous sulfuric acid at low concentration, and differences between the two functions at high concentration are discussed and explained. This pH-H(0) relation is consistent with the literature showing that the H(0) of sulfuric acid (in the 1-9 M range) is similar to those of HCl and the other strong mineral monoprotic acids. The titration of aqueous sulfuric acid with NaOH does not agree with the known second dissociation constant of 0.010 23; rather, the constant is found to be ~0.32 and the acid behaves upon neutralization as a strong diprotic acid practically dissociating in one step. A plausible reaction pathway is offered to explain how the acid may transform, upon base neutralization, from a dissociated H(4)SO(5) (as 3H(+) and HSO(5)(3-)) to a dissociated H(2)SO(4) even though the equilibrium constant of the reaction H(+) + HSO(5)(3-) ↔ SO(4)(2-) + H(2)O, at 25 °C, is 10(-37) (part 1).

  3. Bile acid interactions with cholangiocytes

    Institute of Scientific and Technical Information of China (English)

    Xuefeng Xia; Heather Francis; Shannon Glaser; Gianfranco Alpini; Gene LeSage

    2006-01-01

    Cholangiocytes are exposed to high concentrations of bile acids at their apical membrane. A selective transporter for bile acids, the Apical Sodium Bile Acid Cotransporter (ASBT) (also referred to as Ibat; gene name Slc10a2)is localized on the cholangiocyte apical membrane. On the basolateral membrane, four transport systems have been identified (t-ASBT, multidrug resistance (MDR)3,an unidentified anion exchanger system and organic solute transporter (Ost) heteromeric transporter, OstαOstβ. Together, these transporters unidirectionally move bile acids from ductal bile to the circulation. Bile acids absorbed by cholangiocytes recycle via the peribiliaryplexus back to hepatocytes for re-secretion into bile.This recycling of bile acids between hepatocytes and cholangiocytes is referred to as the cholehepatic shunt pathway. Recent studies suggest that the cholehepatic shunt pathway may contribute in overall hepatobiliary transport of bile acids and to the adaptation to chronic cholestasis due to extrahepatic obstruction. ASBT is acutely regulated by an adenosine 3', 5'-monophosphate (cAMP)-dependent translocation to the apical membrane and by phosphorylation-dependent ubiquitination and proteasome degradation. ASBT is chronically regulated by changes in gene expression in response to biliary bile acid concentration and inflammatory cytokines.Another potential function of cholangiocyte ASBT is to allow cholangiocytes to sample biliary bile acids in order to activate intracellular signaling pathways. Bile acids trigger changes in intracellular calcium, protein kinase C (PKC), phosphoinositide 3-kinase (PI3K), mitogenactivated protein (MAP) kinase and extracellular signalregulated protein kinase (ERK) intracellular signals.Bile acids significantly alter cholangiocyte secretion,proliferation and survival. Different bile acids have differential effects on cholangiocyte intracellular signals,and in some instances trigger opposing effects on cholangiocyte secretion

  4. Citric acid production patent review.

    Science.gov (United States)

    Anastassiadis, Savas; Morgunov, Igor G; Kamzolova, Svetlana V; Finogenova, Tatiana V

    2008-01-01

    Current Review article summarizes the developments in citric acid production technologies in East and West last 100 years. Citric acid is commercially produced by large scale fermentation mostly using selected fungal or yeast strains in aerobe bioreactors and still remains one of the runners in industrial production of biotechnological bulk metabolites obtained by microbial fermentation since about 100 years, reflecting the historical development of modern biotechnology and fermentation process technology in East and West. Citric acid fermentation was first found as a fungal product in cultures of Penicillium glaucum on sugar medium by Wehmer in 1893. Citric acid is an important multifunctional organic acid with a broad range of versatile uses in household and industrial applications that has been produced industrially since the beginning of 20(th) century. There is a great worldwide demand for citric acid consumption due to its low toxicity, mainly being used as acidulant in pharmaceutical and food industries. Global citric acid production has reached 1.4 million tones, increasing annually at 3.5-4.0% in demand and consumption. Citric acid production by fungal submerged fermentation is still dominating, however new perspectives like solid-state processes or continuous yeast processes can be attractive for producers to stand in today's strong competition in industry. Further perspectives aiming in the improvement of citric acid production are the improvement of citric acid producing strains by classical and modern mutagenesis and selection as well as downstream processes. Many inexpensive by-products and residues of the agro-industry (e.g. molasses, glycerin etc.) can be economically utilized as substrates in the production of citric acid, especially in solid-state fermentation, enormously reducing production costs and minimizing environmental problems. Alternatively, continuous processes utilizing yeasts which reach 200-250 g/l citric acid can stand in today

  5. Role of Ribonucleic Acid Synthesis in Replication of Deoxyribonucleic Acid

    Science.gov (United States)

    Pato, Martin L.

    1975-01-01

    An experiment previously interpreted to show a ribonucleic acid requirement for propagation of deoxyribonucleic replication is reexamined and the earlier interpretation is shown to be incorrect. PMID:1090599

  6. Rotational study of the bimolecule acetic acid-fluoroacetic acid

    Science.gov (United States)

    Feng, Gang; Gou, Qian; Evangelisti, Luca; Caminati, Walther

    2017-01-01

    The rotational spectrum of the acetic acid-fluoroacetic acid bimolecule was measured by using a pulsed jet Fourier transform microwave spectrometer. One conformer, in which fluoroacetic acid is in trans form, has been observed. The rotational transitions are split into two component lines, due to the internal rotation of the methyl group of acetic acid. From these splittings, the corresponding V3 barrier has been determined. The dissociation energy of this complex has been estimated to 66 kJ/mol. An increase of the distance between the two monomers upon the OH → OD substitution (Ubbelohde effect) has been observed.

  7. Evaluation of ascorbic acid in protecting labile folic acid derivatives.

    OpenAIRE

    1983-01-01

    The use of ascorbic acid as a reducing agent to protect labile, reduced derivatives of folic acid has been evaluated by high-performance liquid chromatographic separations and Lactobacillus casei microbiological assay of eluate fractions. Upon heating for 10 min at 100 degrees C, solutions of tetrahydropteroylglutamic acid (H4PteGlu) in 2% sodium ascorbate gave rise to 5,10-methylene-H4PteGlu and 5-methyl-H4PteGlu. H2PteGlu acid gave rise to 5-methyl-H4PteGlu and PteGlu. 10-Formyl-H4PteGlu ga...

  8. Determination of acetylsalicylic acid and salicylic acid in foods, using HPLC with fluorescence detection.

    OpenAIRE

    Venema, D.P.; Hollman, P.C.H.; Janssen, P.L.T.M.K.; Katan, M B

    1996-01-01

    We developed a specific and sensitive HPLC method with fluorescence detection for the determination of free acetylsalicylic acid, free salicylic acid, and free salicylic acid plus salicylic acid after alkaline hydrolysis (free-plus-bound) in foods. Acetylsalicylic acid was detected after postcolumn hydrolysis to salicylic acid. With the method for free acetylsalicylic acid and salicylic acid, recovery was 95-98␏or acetylsalicylic acid added to foods and 92-102␏or salicylic acid. Recovery of a...

  9. Esterification by the Plasma Acidic Water: Novel Application of Plasma Acid

    Science.gov (United States)

    Gu, Ling

    2014-03-01

    This work explores the possibility of plasma acid as acid catalyst in organic reactions. Plasma acidic water was prepared by dielectric barrier discharge and used to catalyze esterification of n-heptanioc acid with ethanol. It is found that the plasma acidic water has a stable and better performance than sulfuric acid, meaning that it is an excellent acid catalyst. The plasma acidic water would be a promising alternative for classic mineral acid as a more environment friendly acid.

  10. 49 CFR 173.158 - Nitric acid.

    Science.gov (United States)

    2010-10-01

    ... 49 Transportation 2 2010-10-01 2010-10-01 false Nitric acid. 173.158 Section 173.158... Nitric acid. (a) Nitric acid exceeding 40 percent concentration may not be packaged with any other material. (b) Nitric acid in any concentration which does not contain sulfuric acid or hydrochloric acid as...

  11. Molecular Simulation of Naphthenic Acid Removal on Acidic Catalyst Ⅱ. Experimental results of catalytic decarboxylation over acidic catalysts

    Institute of Scientific and Technical Information of China (English)

    Fu Xiaoqin; Tian Songbai; Hou Shuandi; Longjun; Wang Xieqing

    2008-01-01

    The energy barriers of thermal decarboxylation reactions of petroleum acids and catalytic decarboxylation reactions of Br(o)nsted acid and Lewis acid were analyzed using molecular simulation technology.Compared with thermal decarboxylation reactions of petroleum acids, the decarboxylation reactions by acid catalysts were easier to occur. The decarboxylaton effect by Lewis acid was better than Br(o)nsted acid. The mechanisms of catalytic decarboxylation over acid catalyst were also verified by experiments on a fixed bed and a fluidized bed, the experimental results showed that the rate of acid removal could reach up to 97% over the acidic catalyst at a temperature above 400℃.

  12. Nanoclusters of Cyanuric Acid

    Indian Academy of Sciences (India)

    M ELANGO; V SUBRAMANIAN; N SATHYAMURTHY

    2017-07-01

    In this article, the self-assembly of cyanuric acid (CA) molecules into nano-structures is examined. Equilibrium geometry of CA is planar and it belongs to the D3h point group. It is shown that CA clusters form three dimensional bowls and balls. Cyclic pentamer (5-bowl) is the basic motif responsible for these non-planar geometries. It is also shown that the cyclic hexamer based clusters can be non-planar if they contain a 5-bowl. A unified criterion for the formation of bowls and balls from basic molecular building blocks emerges from this study. The role of symmetry in supramolecular self-assembly is also clearly evident from the present study.

  13. Acid mine drainage

    Science.gov (United States)

    Bigham, Jerry M.; Cravotta, Charles A.

    2016-01-01

    Acid mine drainage (AMD) consists of metal-laden solutions produced by the oxidative dissolution of iron sulfide minerals exposed to air, moisture, and acidophilic microbes during the mining of coal and metal deposits. The pH of AMD is usually in the range of 2–6, but mine-impacted waters at circumneutral pH (5–8) are also common. Mine drainage usually contains elevated concentrations of sulfate, iron, aluminum, and other potentially toxic metals leached from rock that hydrolyze and coprecipitate to form rust-colored encrustations or sediments. When AMD is discharged into surface waters or groundwaters, degradation of water quality, injury to aquatic life, and corrosion or encrustation of engineered structures can occur for substantial distances. Prevention and remediation strategies should consider the biogeochemical complexity of the system, the longevity of AMD pollution, the predictive power of geochemical modeling, and the full range of available field technologies for problem mitigation.

  14. Enzymatic tRNA acylation by acid and alpha-hydroxy acid analogues of amino acids.

    Science.gov (United States)

    Owczarek, Alina; Safro, Mark; Wolfson, Alexey D

    2008-01-08

    Incorporation of unnatural amino acids with unique chemical functionalities has proven to be a valuable tool for expansion of the functional repertoire and properties of proteins as well as for structure-function analysis. Incorporation of alpha-hydroxy acids (primary amino group is substituted with hydroxyl) leads to the synthesis of proteins with peptide bonds being substituted by ester bonds. Practical application of this modification is limited by the necessity to prepare corresponding acylated tRNA by chemical synthesis. We investigated the possibility of enzymatic incorporation of alpha-hydroxy acid and acid analogues (lacking amino group) of amino acids into tRNA using aminoacyl-tRNA synthetases (aaRSs). We studied direct acylation of tRNAs by alpha-hydroxy acid and acid analogues of amino acids and corresponding chemically synthesized analogues of aminoacyl-adenylates. Using adenylate analogues we were able to enzymatically acylate tRNA with amino acid analogues which were otherwise completely inactive in direct aminoacylation reaction, thus bypassing the natural mechanisms ensuring the selectivity of tRNA aminoacylation. Our results are the first demonstration that the use of synthetic aminoacyl-adenylates as substrates in tRNA aminoacylation reaction may provide a way for incorporation of unnatural amino acids into tRNA, and consequently into proteins.

  15. Ghrelin and gastric acid secretion.

    Science.gov (United States)

    Yakabi, Koji; Kawashima, Junichi; Kato, Shingo

    2008-11-07

    Ghrelin, a novel growth hormone-releasing peptide, was originally isolated from rat and human stomach. Ghrelin has been known to increase the secretion of growth hormone (GH), food intake, and body weight gain when administered peripherally or centrally. Ghrelin is also known to stimulate the gastric motility and the secretion of gastric acid. In the previous studies, the action of ghrelin on acid secretion was shown to be as strong as that of histamine and gastrin in in-vivo experiment. In the studies, the mechanism for the action of ghrelin was also investigated. It was shown that vagotomy completely inhibited the action of ghrelin on the secretion of gastric acid suggesting that vagal nerve is involved in the mechanism for the action of ghrelin on acid secretion. As famotidine did not inhibit ghrelin-induced acid secretion in the study by Masuda et al, they concluded that histamine was not involved in the action of ghrelin on acid secretion. However, we have shown that famotidine completely inhibited ghrelin-induced acid secretion and histidine decarboxylase (HDC) mRNA was increased in gastric mucosa by ghrelin injection which is inhibited by vagotomy Our results indicate that histamine is involved in the action of ghrelin on acid secretion. Furthermore synergistic action of gastrin and ghrelin on gastric acid secretion was shown. Although gastrin has important roles in postprandial secretion of gastric acid, ghrelin may be related to acid secretion during fasting period or at night. However, further studies are needed to elucidate the physiological role of ghrelin in acid secretion.

  16. Ferromagnetic coupling in the three-dimensional malonato-bridged gadoliniumIII complex [Gd2(mal)3(H2O)6] (H2mal = malonic acid).

    Science.gov (United States)

    Hernández-Molina, María; Ruiz-Pérez, Catalina; López, Trinidad; Lloret, Francesc; Julve, Miguel

    2003-09-08

    The novel gadolinium(III) complex of formula [Gd(2)(mal)(3)(H(2)O)(6)] (1) (H(2)mal = 1,3-propanedioic acid) has been prepared and characterized by X-ray diffraction analysis. Crystal data for 1: monoclinic, space group I2/a, a = 11.1064(10) A, b = 12.2524(10) A, c =13.6098(2) A, beta = 92.925(10) degrees, U = 1849.5(3) A(3), Z = 4. Compound 1 is a three-dimensional network made up of malonate-bridged gadolinium(III) ions where the malonate exhibits two bridging modes, eta(5)-bidentate + unidentate and eta(3):eta(3) + bis(unidentate). The gadolinium atom is nine-coordinate with three water molecules and six malonate oxygen atoms from three malonate ligands forming a distorted monocapped square antiprism. The shortest metal-metal separations are 4.2763(3) A [through the oxo-carboxylate bridge] and 6.541(3) A [through the carboxylate in the anti-syn coordination mode]. The value of the angle at the oxo-carboxylate atom is 116.8(2) degrees. Variable-temperature magnetic susceptibility measurements reveal the occurrence of a significant ferromagnetic interaction through the oxo-carboxylate pathway (J = +0.048(1) cm(-1), H = -JS(Gd(1)) x S(Gd(1a))).

  17. Effects of linseed oil and natural or synthetic vitamin E supplementation in lactating ewes' diets on meat fatty acid profile and lipid oxidation from their milk fed lambs.

    Science.gov (United States)

    Gallardo, B; Manca, M G; Mantecón, A R; Nudda, A; Manso, T

    2015-04-01

    Forty-eight Churra ewes with their new-born lambs were separated into four dietary treatments: Control (without added fat), LO (with 3% linseed oil), LO-Syn E (LO plus 400 mg/kg TMR of synthetic vitamin E) and LO-Nat E (LO plus 400 g/kg TMR of natural vitamin E). Linseed oil caused an increase in trans-11 C18:1 (VA), trans-10 C18:1, cis-9, trans-11 C18:2 (RA), trans-10, cis-12 C18:2 and C18:3 n-3 (ALA) in milk fat compared to the Control. The addition of vitamin E to the LO diets did not influence significantly the majority of milk fatty acids compared with the LO diet alone. Trans-10 C18:1, VA, RA, trans-10, cis-12 C18:2 and LA levels were higher in intramuscular lamb fat from treatments with linseed oil. No statistically significant differences were observed in these FA due to vitamin E supplementation or the type of vitamin E (synthetic vs. natural). Vitamin supplementation resulted in lipid oxidation levels below the threshold values for detection of rancidity in lamb meat. Copyright © 2014 Elsevier Ltd. All rights reserved.

  18. Growth inhibitory activity of fatty acid methyl esters in the whole seed oil of madagascar periwinkle (Apocyanaceae) against Helicoverpa armigera (Lepidoptera: Noctuidae).

    Science.gov (United States)

    Satyan, R S; Malarvannan, S; Eganathan, P; Rajalakshmi, S; Parida, Ajay

    2009-06-01

    Crude hexane and water extracts of Catharanthus roseus Linn. (Syn: Vinca rosea) (Apocyanaceae) stem, leaf, and seed exhibited pesticidal activity against Helicoverpa armigera (Hübner) (Lepidoptera Noctuidae). The extracts differed significantly in their efficacy, with the crude hexane extract of whole seed being the most effective in curtailing pupal survivorship to 18% followed by the hexane extracts of leaf (21%) and stem (24%). Average pupal weight (68.2 mg) and length (1.5 cm) in the whole seed treatment were drastically reduced, compared with the controls (415.2 mg and 2.72 cm), subsequently reducing adult emergence to 15.7%. SiO2 column purification yielded eight fractions of which fraction 1 exhibited 90% larval mortality, with severe reduction of the larvae weight (12.7 mg) and length (1.5 cm). Gas chromatographic-mass spectrometric analysis of fraction 1 suggested the presence of 16 compounds, among which oleic, linoleic, palmitic, and margaric acids were detected as major constituents. Presence of the alkane hydrocarbons triacontane, tetracosane, and heptacosane also was noted.

  19. Racemization of Meteoritic Amino Acids

    Science.gov (United States)

    Cohen, Barbara A.; Chyba, Christopher F.

    2000-05-01

    Meteorites may have contributed amino acids to the prebiotic Earth, affecting the global ratio of right-handed to left-handed (D/L) molecules. We calculate D/L ratios for seven biological, α-hydrogen, protein amino acids over a variety of plausible parent body thermal histories, based on meteorite evidence and asteroid modeling. We show that amino acids in meteorites do not necessarily undergo complete racemization by the time they are recovered on Earth. If the mechanism of amino acid formation imposes some enantiomeric preference on the amino acids, a chiral signature can be retained through the entire history of the meteorite. Original enantiomeric excesses in meteorites such as Murchison, which have undergone apparently short and cool alteration scenarios, should have persisted to the present time. Of the seven amino acids for which relevant data are available, we expect glutamic acid, isoleucine, and valine, respectively, to be the most likely to retain an initial enantiomeric excess, and phenylalanine, aspartic acid, and alanine the least. Were the D/L ratio initially identical in each amino acid, final D/L ratios could be used to constrain the initial ratio and the thermal history experienced by the whole suite.

  20. Antibiofilm Properties of Acetic Acid

    DEFF Research Database (Denmark)

    Bjarnsholt, Thomas; Alhede, Morten; Jensen, Peter Østrup;

    2014-01-01

    of the infected implant, tissue, or organ and thereby the biofilm. Acetic acid is known for its antimicrobial effect on bacteria in general, but has never been thoroughly tested for its efficacy against bacterial biofilms. In this article, we describe complete eradication of both Gram-positive and Gram......-negative biofilms using acetic acid both as a liquid and as a dry salt. In addition, we present our clinical experience of acetic acid treatment of chronic wounds. In conclusion, we here present the first comprehensive in vitro and in vivo testing of acetic acid against bacterial biofilms....

  1. Preparation and characterization Al3+-bentonite Turen Malang for esterification fatty acid (palmitic acid, oleic acid and linoleic acid)

    Science.gov (United States)

    Abdulloh, Abdulloh; Aminah, Nanik Siti; Triyono, Mudasir, Trisunaryanti, Wega

    2016-03-01

    Catalyst preparation and characterization of Al3+-bentonite for esterification of palmitic acid, oleic acid and linoleic acid has been done. Al3+-bentonite catalyst was prepared from natural bentonite of Turen Malang through cation exchange reaction using AlCl3 solution. The catalysts obtained were characterized by XRD, XRF, pyridine-FTIR and surface area analyser using the BET method. Catalyst activity test of Al3+-bentonite for esterification reaction was done at 65°C using molar ratio of metanol-fatty acid of 30:1 and 0.25 g of Al3+-bentonite catalyst for the period of ½, 1, 2, 3, 4 and 5 hours. Based on the characterization results, the Al3+-bentonite Turen Malang catalyst has a d-spacing of 15.63 Ǻ, acid sites of Brönsted and Lewis respectively of 230.79 µmol/g and 99.39 µmol/g, surface area of 507.3 m2/g and the average of radius pore of 20.09 Å. GC-MS analysis results of the oil phase after esterification reaction showed the formation of biodiesel (FAME: Fatty acid methyl ester), namely methyl palmitate, methyl oleate and methyl linoleate. The number of conversions resulted in esterification reaction using Al3+-bentonite Turen Malang catalyst was 74.61%, 37.75%, and 20, 93% for the esterification of palmitic acid, oleic acid and linoleic acid respectively.

  2. [Hydrofluoric acid poisoning: case report].

    Science.gov (United States)

    Cortina, Tatiana Judith; Ferrero, Hilario Andrés

    2013-01-01

    Hydrofluoric acid is a highly dangerous substance with industrial and domestically appliances. Clinical manifestations of poisoning depend on exposure mechanism, acid concentration and exposed tissue penetrability. Gastrointestinal tract symptoms do not correlate with injury severity. Patients with history of hydrofluoric acid ingestion should undergo an endoscopy of the upper gastrointestinal tract. Intoxication requires immediate intervention because systemic toxicity can take place. We present a 5 year old girl who accidentally swallowed 5 ml of 20% hydrofluoric acid. We performed gastrointestinal tract endoscopy post ingestion, which revealed erythematous esophagus and stomach with erosive lesions. Two months later, same study was performed and revealed esophagus and stomach normal mucous membrane.

  3. ACETIC ACID AND A BUFFER

    DEFF Research Database (Denmark)

    2009-01-01

    The present invention relates to a composition comprising : a) 0.01-20% wt/wt acetic acid and b) a physiologically tolerable buffer capable of maintaining acetic acid at a pH in the range of 2-7; and use of such a composition as an antimicrobial agent.......The present invention relates to a composition comprising : a) 0.01-20% wt/wt acetic acid and b) a physiologically tolerable buffer capable of maintaining acetic acid at a pH in the range of 2-7; and use of such a composition as an antimicrobial agent....

  4. Retinoic acid and iron metabolism

    DEFF Research Database (Denmark)

    Chakraborty, Surajit; Bhattacharyya, Rajasri; Sayal, Kirtimaan

    2014-01-01

    tuberculosis controlling molecules in the days to come. Iron has proven to be essential for pathogenesis of tuberculosis and retinoic acid is known to influence the iron metabolism pathway. Retenoic acid is also known to exhibit antitubercular effect in in vivo system. Therefore there is every possibility...... that retinoic acid by affecting the iron metabolism pathway exhibits its antimycobacterial effect. These aspects are reviewed in the present manuscript for understanding the antimycobacterial role of retinoic acid in the context of iron metabolism and other immunological aspects....

  5. ACETIC ACID AND A BUFFER

    DEFF Research Database (Denmark)

    2009-01-01

    The present invention relates to a composition comprising : a) 0.01-20% wt/wt acetic acid and b) a physiologically tolerable buffer capable of maintaining acetic acid at a pH in the range of 2-7; and use of such a composition as an antimicrobial agent.......The present invention relates to a composition comprising : a) 0.01-20% wt/wt acetic acid and b) a physiologically tolerable buffer capable of maintaining acetic acid at a pH in the range of 2-7; and use of such a composition as an antimicrobial agent....

  6. Biotechnological production of citric acid

    National Research Council Canada - National Science Library

    Max, Belén; Salgado, José Manuel; Rodríguez, Noelia; Cortés, Sandra; Converti, Attilio; Domínguez, José Manuel

    2010-01-01

    This work provides a review about the biotechnological production of citric acid starting from the physicochemical properties and industrial applications, mainly in the food and pharmaceutical sectors...

  7. Fatty Acid Desaturases, Polyunsaturated Fatty Acid Regulation, and Biotechnological Advances.

    Science.gov (United States)

    Lee, Je Min; Lee, Hyungjae; Kang, SeokBeom; Park, Woo Jung

    2016-01-04

    Polyunsaturated fatty acids (PUFAs) are considered to be critical nutrients to regulate human health and development, and numerous fatty acid desaturases play key roles in synthesizing PUFAs. Given the lack of delta-12 and -15 desaturases and the low levels of conversion to PUFAs, humans must consume some omega-3 and omega-6 fatty acids in their diet. Many studies on fatty acid desaturases as well as PUFAs have shown that fatty acid desaturase genes are closely related to different human physiological conditions. Since the first front-end desaturases from cyanobacteria were cloned, numerous desaturase genes have been identified and animals and plants have been genetically engineered to produce PUFAs such as eicosapentaenoic acid and docosahexaenoic acid. Recently, a biotechnological approach has been used to develop clinical treatments for human physiological conditions, including cancers and neurogenetic disorders. Thus, understanding the functions and regulation of PUFAs associated with human health and development by using biotechnology may facilitate the engineering of more advanced PUFA production and provide new insights into the complexity of fatty acid metabolism.

  8. Peptide Nucleic Acids Having Amino Acid Side Chains

    DEFF Research Database (Denmark)

    1998-01-01

    A novel class of compounds, known as peptide nucleic acids, bind complementary DNA and RNA strands more strongly than the corresponding DNA or RNA strands, and exhibit increased sequence specificity and solubility. The peptide nucleic acids comprise ligands selected from a group consisting...

  9. Fatty Acid Desaturases, Polyunsaturated Fatty Acid Regulation, and Biotechnological Advances

    Directory of Open Access Journals (Sweden)

    Je Min Lee

    2016-01-01

    Full Text Available Polyunsaturated fatty acids (PUFAs are considered to be critical nutrients to regulate human health and development, and numerous fatty acid desaturases play key roles in synthesizing PUFAs. Given the lack of delta-12 and -15 desaturases and the low levels of conversion to PUFAs, humans must consume some omega-3 and omega-6 fatty acids in their diet. Many studies on fatty acid desaturases as well as PUFAs have shown that fatty acid desaturase genes are closely related to different human physiological conditions. Since the first front-end desaturases from cyanobacteria were cloned, numerous desaturase genes have been identified and animals and plants have been genetically engineered to produce PUFAs such as eicosapentaenoic acid and docosahexaenoic acid. Recently, a biotechnological approach has been used to develop clinical treatments for human physiological conditions, including cancers and neurogenetic disorders. Thus, understanding the functions and regulation of PUFAs associated with human health and development by using biotechnology may facilitate the engineering of more advanced PUFA production and provide new insights into the complexity of fatty acid metabolism.

  10. Carbonic Acid Pretreatment of Biomass

    Energy Technology Data Exchange (ETDEWEB)

    G. Peter van Walsum; Kemantha Jayawardhana; Damon Yourchisin; Robert McWilliams; Vanessa Castleberry

    2003-05-31

    This project sought to address six objectives, outlined below. The objectives were met through the completion of ten tasks. 1) Solidify the theoretical understanding of the binary CO2/H2O system at reaction temperatures and pressures. The thermodynamics of pH prediction have been improved to include a more rigorous treatment of non-ideal gas phases. However it was found that experimental attempts to confirm theoretical pH predictions were still off by a factor of about 1.8 pH units. Arrhenius experiments were carried out and the activation energy for carbonic acid appears to be substantially similar to sulfuric acid. Titration experiments have not yet confirmed or quantified the buffering or acid suppression effects of carbonic acid on biomass. 2) Modify the carbonic acid pretreatment severity function to include the effect of endogenous acid formation and carbonate buffering, if necessary. It was found that the existing severity functions serve adequately to account for endogenous acid production and carbonate effects. 3) Quantify the production of soluble carbohydrates at different reaction conditions and severity. Results show that carbonic acid has little effect on increasing soluble carbohydrate concentrations for pretreated aspen wood, compared to pretreatment with water alone. This appears to be connected to the release of endogenous acids by the substrate. A less acidic substrate such as corn stover would derive benefit from the use of carbonic acid. 4) Quantify the production of microbial inhibitors at selected reaction conditions and severity. It was found that the release of inhibitors was correlated to reaction severity and that carbonic acid did not appear to increase or decrease inhibition compared to pretreatment with water alone. 5) Assess the reactivity to enzymatic hydrolysis of material pretreated at selected reaction conditions and severity. Enzymatic hydrolysis rates increased with severity, but no advantage was detected for the use of carbonic

  11. Carbonic Acid Retreatment of Biomass

    Energy Technology Data Exchange (ETDEWEB)

    Baylor university

    2003-06-01

    This project sought to address six objectives, outlined below. The objectives were met through the completion of ten tasks. (1) Solidify the theoretical understanding of the binary CO{sub 2}/H{sub 2}O system at reaction temperatures and pressures. The thermodynamics of pH prediction have been improved to include a more rigorous treatment of non-ideal gas phases. However it was found that experimental attempts to confirm theoretical pH predictions were still off by a factor of about 1.8 pH units. Arrhenius experiments were carried out and the activation energy for carbonic acid appears to be substantially similar to sulfuric acid. Titration experiments have not yet confirmed or quantified the buffering or acid suppression effects of carbonic acid on biomass. (2) Modify the carbonic acid pretreatment severity function to include the effect of endogenous acid formation and carbonate buffering, if necessary. It was found that the existing severity functions serve adequately to account for endogenous acid production and carbonate effects. (3) Quantify the production of soluble carbohydrates at different reaction conditions and severity. Results show that carbonic acid has little effect on increasing soluble carbohydrate concentrations for pretreated aspen wood, compared to pretreatment with water alone. This appears to be connected to the release of endogenous acids by the substrate. A less acidic substrate such as corn stover would derive benefit from the use of carbonic acid. (4) Quantify the production of microbial inhibitors at selected reaction conditions and severity. It was found that the release of inhibitors was correlated to reaction severity and that carbonic acid did not appear to increase or decrease inhibition compared to pretreatment with water alone. (5) Assess the reactivity to enzymatic hydrolysis of material pretreated at selected reaction conditions and severity. Enzymatic hydrolysis rates increased with severity, but no advantage was detected for

  12. Ghrelin and gastric acid secretion

    Institute of Scientific and Technical Information of China (English)

    Koji Yakabi; Junichi Kawashima; Shingo Kato

    2008-01-01

    Ghrelin, a novel growth hormone-releasing peptide, was originally isolated from rat and human stomach. Ghrelin has been known to increase the secretion of growth hormone (GH), food intake, and body weight gain when administered peripherally or centrally. Ghrelin is also known to stimulate the gastric motility and the secretion of gastric acid. In the previous studies, the action of ghrelin on acid secretion was shown to be as strong as that of histamine and gastrin in-vivo experiment. In the studies, the mechanism for the action of ghrelin was also investigated. It was shown that vagotomy completely inhibited the action of ghrelin on the secretion of gastric acid suggesting that vagal nerve is involved in the mechanism for the action of ghrelin on acid secretion. As famotidine did not inhibit ghrelin-in-duced acid secretion in the study by Masuda et al, they concluded that histamine was not involved in the action of ghrelin on acid secretion. However, we have shown that famotidine completely inhibited ghrelin-induced acid secretion and histidine decarboxylase (HDC) mRNA was increased in gastric mucosa by ghrelin injection which is inhibited by vagotomy Our results indicate that histamine is involved in the action of ghrelin on acid secretion. Furthermore synergistic action of gastrin and ghrelin on gastric add secretion was shown. Although gastrin has important roles in postprandial secretion of gastric acid, ghrelin may be related to acid secretion during fasting period or at night. However, further studies are needed to elucidate the physiological role of ghrelin in acid secretion.

  13. Amino acids in Arctic aerosols

    Directory of Open Access Journals (Sweden)

    E. Scalabrin

    2012-11-01

    Full Text Available Amino acids are significant components of atmospheric aerosols, affecting organic nitrogen input to marine ecosystems, atmospheric radiation balance, and the global water cycle. The wide range of amino acid reactivities suggest that amino acids may serve as markers of atmospheric transport and deposition of particles. Despite this potential, few measurements have been conducted in remote areas to assess amino acid concentrations and potential sources. Polar regions offer a unique opportunity to investigate atmospheric processes and to conduct source apportionment studies of such compounds. In order to better understand the importance of amino acid compounds in the global atmosphere, we determined free amino acids (FAAs in seventeen size-segregated aerosol samples collected in a polar station in the Svalbard Islands from 19 April until 14 September 2010. We used an HPLC coupled with a tandem mass spectrometer (ESI-MS/MS to analyze 20 amino acids and quantify compounds at fmol m−3 levels. Mean total FAA concentration was 1070 fmol m−3 where serine and glycine were the most abundant compounds in almost all samples and accounted for 45–60% of the total amino acid relative abundance. The other eighteen compounds had average concentrations between 0.3 and 98 fmol m−3. The higher amino acid concentrations were present in the ultrafine aerosol fraction (< 0.49 μm and accounted for the majority of the total amino acid content. Local marine sources dominate the boreal summer amino acid concentrations, with the exception of the regional input from Icelandic volcanic emissions.

  14. Amino acids in Arctic aerosols

    Directory of Open Access Journals (Sweden)

    E. Scalabrin

    2012-07-01

    Full Text Available Amino acids are significant components of atmospheric aerosols, affecting organic nitrogen input to marine ecosystems, atmospheric radiation balance, and the global water cycle. The wide range of amino acid reactivities suggest that amino acids may serve as markers of atmospheric transport and deposition of particles. Despite this potential, few measurements have been conducted in remote areas to assess amino acid concentrations and potential sources. Polar regions offer a unique opportunity to investigate atmospheric processes and to conduct source apportionment studies of such compounds. In order to better understand the importance of amino acid compounds in the global atmosphere, we determined free amino acids (FAAs in seventeen size-segregated aerosol samples collected in a polar station in the Svalbard Islands from 19 April until 14 September 2010. We used an HPLC coupled with a tandem mass spectrometer (ESI-MS/MS to analyze 20 amino acids to quantify compounds at fmol m−3 levels. Mean total FAA concentration was 1070 fmol m−3 where serine and glycine were the most abundant compounds in almost all samples and accounted for 45–60% of the total amino acid relative abundance. The other eighteen compounds had average concentrations between 0.3 and 98 fmol m−3. The higher amino acid concentrations were present in the ultrafine aerosol fraction (<0.49 μm and accounted for the majority of the total amino acid content. Local marine sources dominate the boreal summer amino acid concentrations, with the exception of the regional input from Icelandic volcanics.

  15. The acidic amino acids of tulip: isolation of γ-ethylideneglutamic acid

    Science.gov (United States)

    Fowden, L.

    1966-01-01

    1. γ-Ethylideneglutamic acid has been isolated from fruit capsules of tulip plants. 2. The assigned structure was indicated by examining the products formed after oxidation and catalytic hydrogenation and was confirmed by nuclear-magnetic-resonance spectroscopy and by synthesis of γ-ethylglutamic acid. 3. The ability of γ-ethylideneglutamic acid to participate in transamination and decarboxylation reactions was examined. PMID:5938664

  16. Infrared spectra of hydrogen-bonded salicylic acid and its derivatives : Salicylic acid and acetylsalicylic acid

    Science.gov (United States)

    Wójcik, Marek J.

    1981-11-01

    Infrared spectra of hydrogen-bonded salicylic acid, O-deutero-salicylic acid and acetylsalicylic acid crystals have been studied experimentally and theoretically. Interpretation of these spectra was based on the Witkowski-Maréchal model. Semi-quantitative agreement between experimental and theoretical spectra can be achieved with the simplest form of this model, with values of interaction parameters transferable for equivalent intermolecular hydrogen bonds.

  17. Production of succinic Acid from citric Acid and related acids by lactobacillus strains.

    Science.gov (United States)

    Kaneuchi, C; Seki, M; Komagata, K

    1988-12-01

    A number of Lactobacillus strains produced succinic acid in de Man-Rogosa-Sharpe broth to various extents. Among 86 fresh isolates from fermented cane molasses in Thailand, 30 strains (35%) produced succinic acid; namely, 23 of 39 Lactobacillus reuteri strains, 6 of 18 L. cellobiosus strains, and 1 of 6 unidentified strains. All of 10 L. casei subsp. casei strains, 5 L. casei subsp. rhamnosus strains, 6 L. mali strains, and 2 L. buchneri strains did not produce succinic acid. Among 58 known strains including 48 type strains of different Lactobacillus species, the strains of L. acidophilus, L. crispatus, L. jensenii, and L. parvus produced succinic acid to the same extent as the most active fresh isolates, and those of L. alimentarius, L. collinoides, L. farciminis, L. fructivorans (1 of 2 strains tested), L. malefermentans, and L. reuteri were also positive, to lesser extents. Diammonium citrate in de Man-Rogosa-Sharpe broth was determined as a precursor of the succinic acid produced. Production rates were about 70% on a molar basis with two fresh strains tested. Succinic acid was also produced from fumaric and malic acids but not from dl-isocitric, alpha-ketoglutaric, and pyruvic acids. The present study is considered to provide the first evidence on the production of succinic acid, an important flavoring substance in dairy products and fermented beverages, from citrate by lactobacilli.

  18. Acid Rain: The Scientific Challenge.

    Science.gov (United States)

    Godfrey, Paul J.

    1991-01-01

    Documents the workings and findings of the Massachusetts Acid Rain Monitoring Project, which has pooled the volunteer efforts of more than 1,000 amateur and professional scientists since 1983. Reports on the origins of air pollution, the prediction of acid rain, and its effects on both water life and land resources. (JJK)

  19. Bile acids for viral hepatitis

    DEFF Research Database (Denmark)

    Chen, Weikeng; Liu, J; Gluud, C

    2003-01-01

    The viral hepatitides are common causes of liver diseases globally. Trials have assessed bile acids for patients with viral hepatitis, but no consensus was reached regarding their usefulness.......The viral hepatitides are common causes of liver diseases globally. Trials have assessed bile acids for patients with viral hepatitis, but no consensus was reached regarding their usefulness....

  20. Acid Rain: What's the Forecast?

    Science.gov (United States)

    Bybee, Rodger

    1984-01-01

    Discusses various types of acid rain, considered to be a century-old problem. Topics include: wet and dry deposition, effects on a variety of environments, ecosystems subject to detrimental effects, and possible solutions to the problem. A list of recommended resources on acid rain is provided. (BC)

  1. Bile acids for viral hepatitis

    DEFF Research Database (Denmark)

    Chen, Weikeng; Liu, J; Gluud, C

    2003-01-01

    The viral hepatitides are common causes of liver diseases globally. Trials have assessed bile acids for patients with viral hepatitis, but no consensus was reached regarding their usefulness.......The viral hepatitides are common causes of liver diseases globally. Trials have assessed bile acids for patients with viral hepatitis, but no consensus was reached regarding their usefulness....

  2. Protein and amino acid nutrition

    Science.gov (United States)

    Dairy cow protein and amino acid nutrition have a significant role in sustainable dairying. Protein, amino acids, and nitrogen are inextricably linked through effects in the rumen, metabolism of the cow, and environmental nutrient management. Feeding systems have been making progress toward emphasiz...

  3. Pantothenic acid (Vitamin B5)

    Science.gov (United States)

    ... vitamin B5 (pantothenic acid), vitamin B6 (pyridoxine), vitamin B12 (cyanocobalamin), and folic acid. However, some products do ... Pantothenas, Calcium D-Pantothenate, Calcium Pantothenate, Complexe de Vitamines B, D-Calcium Pantothenate, D-Panthenol, D-Panthénol, ...

  4. Phosphorus derivatives of salicylic acid

    Science.gov (United States)

    Chvertkina, L. V.; Khoklov, P. S.; Mironov, Vladimir F.

    1992-10-01

    The present state of work on the methods of synthesis, chemical properties, and practical applications of phosphorus-containing derivatives of salicylic acid has been reviewed. The characteristics of the chemical transformations of cyclic and acyclic phosphorus derivatives of salicylic acid related to the coordination state of the phosphorus atom have been examined. The bibliography includes 158 references.

  5. utilisation of synthetic amino acids

    African Journals Online (AJOL)

    student

    intake, bodyweight gain, egg weight or efficiency of lysine utilisation, but ... When modelling the amino acid requirements of broiler breeder ... Two hundred and forty Cobb broiler breeder hens aged 27 weeks were housed in individual cages. ..... feeds with synthetic amino acids is of importance not only on nutritional and.

  6. Acid Rain: What's the Forecast?

    Science.gov (United States)

    Bybee, Rodger

    1984-01-01

    Discusses various types of acid rain, considered to be a century-old problem. Topics include: wet and dry deposition, effects on a variety of environments, ecosystems subject to detrimental effects, and possible solutions to the problem. A list of recommended resources on acid rain is provided. (BC)

  7. Acid Rain: The Scientific Challenge.

    Science.gov (United States)

    Godfrey, Paul J.

    1991-01-01

    Documents the workings and findings of the Massachusetts Acid Rain Monitoring Project, which has pooled the volunteer efforts of more than 1,000 amateur and professional scientists since 1983. Reports on the origins of air pollution, the prediction of acid rain, and its effects on both water life and land resources. (JJK)

  8. Kinetics and Mechanism of Oxidation of Phenyl Acetic Acid and Dl-Mandelic Acid by Permanganate in Acid Medium

    Directory of Open Access Journals (Sweden)

    B.Syama Sundar

    2014-06-01

    Full Text Available Kinetics of oxidation of phenyl acetic acid and DL- Mandelic acid by potassium permanganate in aqueous acetic acid and perchloric acid mixture reveals that the kinetic orders are first order in oxidant, first order in H+ and zero order in substrate for phenyl acetic acid. DL-Mandelic acid exhibits first order in oxidant and zero order in substrate. The results are rationalised by a mechanism involving intermediate formation of mandelic acid in case of Phenyl acetic acid and ester formation with Mn (VII in case of DL-Mandelic acid. The following order of reactivity is observed: DL-Mandelic acid > Phenyl acetic acid. The high reactivity of DL-Mandelic acid over phenyl acetic acid may be due to different mechanisms operating with the two substrates and benzaldehyde is the final product in both the cases.

  9. N-(3-Nitrophenylmaleamic acid

    Directory of Open Access Journals (Sweden)

    B. Thimme Gowda

    2010-07-01

    Full Text Available In the title compound, C10H8N2O5, the molecule is slightly distorted from planarity. The molecular structure is stabilized by two intramolecular hydrogen bonds. The first is a short O—H...O hydrogen bond (H...O distance = 1.57 Å within the maleamic acid unit and the second is a C—H...O hydrogen bond (H...O distance = 2.24 Å which connects the amide group with the benzene ring. The nitro group is twisted by 6.2 (2° out of the plane of the benzene ring. The crystal structure manifests a variety of hydrogen bonding. The packing is dominated by a strong intermolecular N—H...O interaction which links the molecules into chains running along the b axis. The chains within a plane are further assembled by three additional types of intermolecular C—H...O hydrogen bonds to form a sheet parallel to the (overline{1}01 plane.

  10. Molten fatty acid based microemulsions.

    Science.gov (United States)

    Noirjean, Cecile; Testard, Fabienne; Dejugnat, Christophe; Jestin, Jacques; Carriere, David

    2016-06-21

    We show that ternary mixtures of water (polar phase), myristic acid (MA, apolar phase) and cetyltrimethylammonium bromide (CTAB, cationic surfactant) studied above the melting point of myristic acid allow the preparation of microemulsions without adding a salt or a co-surfactant. The combination of SANS, SAXS/WAXS, DSC, and phase diagram determination allows a complete characterization of the structures and interactions between components in the molten fatty acid based microemulsions. For the different structures characterized (microemulsion, lamellar or hexagonal phases), a similar thermal behaviour is observed for all ternary MA/CTAB/water monophasic samples and for binary MA/CTAB mixtures without water: crystalline myristic acid melts at 52 °C, and a thermal transition at 70 °C is assigned to the breaking of hydrogen bounds inside the mixed myristic acid/CTAB complex (being the surfactant film in the ternary system). Water determines the film curvature, hence the structures observed at high temperature, but does not influence the thermal behaviour of the ternary system. Myristic acid is partitioned in two "species" that behave independently: pure myristic acid and myristic acid associated with CTAB to form an equimolar complex that plays the role of the surfactant film. We therefore show that myristic acid plays the role of a solvent (oil) and a co-surfactant allowing the fine tuning of the structure of oil and water mixtures. This solvosurfactant behaviour of long chain fatty acid opens the way for new formulations with a complex structure without the addition of any extra compound.

  11. Pentadecanoic and Heptadecanoic Acids: Multifaceted Odd-Chain Fatty Acids.

    Science.gov (United States)

    Pfeuffer, Maria; Jaudszus, Anke

    2016-07-01

    The odd-chain fatty acids (OCFAs) pentadecanoic acid (15:0) and heptadecanoic acid (17:0), which account for only a small proportion of total saturated fatty acids in milk fat and ruminant meat, are accepted biomarkers of dairy fat intake. However, they can also be synthesized endogenously, for example, from gut-derived propionic acid (3:0). A number of studies have shown an inverse association between OCFA concentrations in human plasma phospholipids or RBCs and risk of type 2 diabetes and cardiovascular disease. We propose a possible involvement in metabolic regulation from the assumption that there is a link between 15:0 and 17:0 and the metabolism of other short-chain, medium-chain, and longer-chain OCFAs. The OCFAs 15:0 and 17:0 can be elongated to very-long-chain FAs (VLCFAs) such as tricosanoic acid (23:0) and pentacosanoic acid (25:0) in glycosphingolipids, particularly found in brain tissue, or can be derived from these VLCFAs. Their chains can be shortened, yielding propionyl-coenzyme A (CoA). Propionyl-CoA, by succinyl-CoA, can replenish the citric acid cycle (CAC) with anaplerotic intermediates and, thus, improve mitochondrial energy metabolism. Mitochondrial function is compromised in a number of disorders and may be impaired with increasing age. Optimizing anaplerotic intermediate availability for the CAC may help to cope with demands in times of increased metabolic stress and with aging. OCFAs may serve as substrates for synthesis of both odd-numbered VLCFAs and propionyl-CoA or store away excess propionic acid.

  12. Fatty acid composition of selected prosthecate bacteria.

    Science.gov (United States)

    Carter, R N; Schmidt, J M

    1976-10-11

    The cellular fatty acid composition of 14 strains of Caulobacter speices and types, two species of Prosthecomicrobium, and two species of Asticcacaulis was determined by gas-liquid chromatography. In most of these bacteria, the major fatty acids were octadecenoic acid (C18:1), hexadecenoic acid (C16:1) and hexadecanoic acid (C16:0). Some cyclopropane and branched chain fatty acids were detected in addition to the straight chained acids. Hydroxytetradecanoic acid was an important component of P.enhydrum but significant amounts of hydroxy acids were not detected in other prosthecate bacteria examined.

  13. The Property and Application of Arachidonic Acid

    Institute of Scientific and Technical Information of China (English)

    王相勤; 姚建铭; 袁成凌; 王纪; 余增亮

    2002-01-01

    Arachidonic acid (AA) is one of the most important PUFAs (polyunsaturated fatty acids) in human body. A high-yield arachidonic acid-producing strain (mortierella alpina) was selected by ion implantation (the relative content of arachidonic acid is 70.2% among all fatty acids). This paper mainly introduced the structure, distribution, source, physiologic healthcare function and application of AA.

  14. Terahertz spectrum of gallic acid

    Science.gov (United States)

    Wu, Meng; Zhao, Guozhong; Wang, Haiyan; Liang, Chengshen

    2009-11-01

    Gallic acid is natural polyphenol compound found in many green plants. More and more experiments have demonstrated that the gallic acid has comprehensive applications. In the field of medicine, the gallic acid plays an important role in antianaphylaxis, antineoplastic, antimycotic, anti-inflammatory, antivirotic, antiasthmatic and inhibiting the degradation of insulin. It also has a lot of applications in chemical industry, food industry and light industry. So it is important to study the terahertz time-domain spectroscopy of gallic acid. Terahertz time-domain spectroscopy (THz-TDS) is a new coherent spectral technology based on the femtosecond laser. In this work, the spectral characteristics of gallic acid in the range of 0.4 THz to 2.6 THz have been measured by THz-TDS. We obtained its absorption and refraction spectra at room temperature. The vibration absorption spectrum of the single molecule between 0.4 THz and 2.6 THz is simulated based on the Density Functional Theory (DFT). It is found that the gallic acid has the spectral response to THz wave in this frequency range. The results show the abnormal dispersion at 1.51 THz and 2.05 THz. These results can be used in the qualitative analysis of gallic acid and the medicine and food inspection.

  15. Amino acids and immune function.

    Science.gov (United States)

    Li, Peng; Yin, Yu-Long; Li, Defa; Kim, Sung Woo; Wu, Guoyao

    2007-08-01

    A deficiency of dietary protein or amino acids has long been known to impair immune function and increase the susceptibility of animals and humans to infectious disease. However, only in the past 15 years have the underlying cellular and molecular mechanisms begun to unfold. Protein malnutrition reduces concentrations of most amino acids in plasma. Findings from recent studies indicate an important role for amino acids in immune responses by regulating: (1) the activation of T lymphocytes, B lymphocytes, natural killer cells and macrophages; (2) cellular redox state, gene expression and lymphocyte proliferation; and (3) the production of antibodies, cytokines and other cytotoxic substances. Increasing evidence shows that dietary supplementation of specific amino acids to animals and humans with malnutrition and infectious disease enhances the immune status, thereby reducing morbidity and mortality. Arginine, glutamine and cysteine precursors are the best prototypes. Because of a negative impact of imbalance and antagonism among amino acids on nutrient intake and utilisation, care should be exercised in developing effective strategies of enteral or parenteral provision for maximum health benefits. Such measures should be based on knowledge about the biochemistry and physiology of amino acids, their roles in immune responses, nutritional and pathological states of individuals and expected treatment outcomes. New knowledge about the metabolism of amino acids in leucocytes is critical for the development of effective means to prevent and treat immunodeficient diseases. These nutrients hold great promise in improving health and preventing infectious diseases in animals and humans.

  16. Phytic acid in green leaves.

    Science.gov (United States)

    Hadi Alkarawi, H; Zotz, G

    2014-07-01

    Phytic acid or phytate, the free-acid form of myo-inositolhexakiphosphate, is abundant in many seeds and fruits, where it represents the major storage form of phosphorus. Although also known from other plant tissues, available reports on the occurrence of phytic acid, e.g. in leaves, have never been compiled, nor have they been critically reviewed. We found 45 published studies with information on phytic acid content in leaves. Phytic acid was almost always detected when studies specifically tried to detect it, and accounted for up to 98% of total P. However, we argue that such extreme values, which rival findings from storage organs, are dubious and probably result from measurement errors. Excluding these high values from further quantitative analysis, foliar phytic acid-P averaged 2.3 mg·g(-1) , and represented, on average, 7.6% of total P. Remarkably, the ratio of phytic acid-P to total P did not increase with total P, we even detected a negative correlation of the two variables within one species, Manihot esculenta. This enigmatic finding warrants further attention.

  17. Determination of polyfluoroalkyl phosphoric acid diesters, perfluoroalkyl phosphonic acids, perfluoroalkyl phosphinic acids, perfluoroalkyl carboxylic acids, and perfluoroalkane sulfonic acids in lake trout from the Great Lakes region.

    Science.gov (United States)

    Guo, Rui; Reiner, Eric J; Bhavsar, Satyendra P; Helm, Paul A; Mabury, Scott A; Braekevelt, Eric; Tittlemier, Sheryl A

    2012-11-01

    A comprehensive method to extract perfluoroalkyl carboxylic acids, perfluoroalkane sulfonic acids, perfluoroalkyl phosphonic acids, perfluoroalkyl phosphinic acids, and polyfluoroalkyl phosphoric acid diesters simultaneously from fish samples has been developed. The recoveries of target compounds ranged from 78 % to 121 %. The new method was used to analyze lake trout (Salvelinus namaycush) from the Great Lakes region. The results showed that the total perfluoroalkane sulfonate concentrations ranged from 0.1 to 145 ng/g (wet weight) with perfluorooctane sulfonate (PFOS) as the dominant contaminant. Concentrations in fish between lakes were in the order of Lakes Ontario ≈ Erie > Huron > Superior ≈ Nipigon. The total perfluoroalkyl carboxylic acid concentrations ranged from 0.2 to 18.2 ng/g wet weight. The aggregate mean perfluorooctanoic acid (PFOA) concentration in fish across all lakes was 0.045 ± 0.023 ng/g. Mean concentrations of PFOA were not significantly different (p > 0.1) among the five lakes. Perfluoroalkyl phosphinic acids were detected in lake trout from Lake Ontario, Lake Erie, and Lake Huron with concentration ranging from non-detect (ND) to 0.032 ng/g. Polyfluoroalkyl phosphoric acid diesters were detected only in lake trout from Lake Huron, at levels similar to perfluorooctanoic acid.

  18. Pyroligneous acid-the smoky acidic liquid from plant biomass.

    Science.gov (United States)

    Mathew, Sindhu; Zakaria, Zainul Akmar

    2015-01-01

    Pyroligneous acid (PA) is a complex highly oxygenated aqueous liquid fraction obtained by the condensation of pyrolysis vapors, which result from the thermochemical breakdown or pyrolysis of plant biomass components such as cellulose, hemicellulose, and lignin. PA produced by the slow pyrolysis of plant biomass is a yellowish brown or dark brown liquid with acidic pH and usually comprises a complex mixture of guaiacols, catechols, syringols, phenols, vanillins, furans, pyrans, carboxaldehydes, hydroxyketones, sugars, alkyl aryl ethers, nitrogenated derivatives, alcohols, acetic acid, and other carboxylic acids. The phenolic components, namely guaiacol, alkyl guaiacols, syringol, and alkyl syringols, contribute to the smoky odor of PA. PA finds application in diverse areas, as antioxidant, antimicrobial, antiinflammatory, plant growth stimulator, coagulant for natural rubber, and termiticidal and pesticidal agent; is a source for valuable chemicals; and imparts a smoky flavor for food.

  19. ELECTRODIALYTIC PRODUCTION OF HYPOPHOSPHOROUS ACID

    Institute of Scientific and Technical Information of China (English)

    CHENG Jianzhong; ZHANG Yingzhe; ZHANG Baogui; ZHANG Zhengpu

    2001-01-01

    Disclosed is a method of preparing hypophosphorous acid comprising contacting an insoluble anode with an aqueous solution of hypophosphite anions and applying a direct current through the insoluble anode to a cathode in electrical contact with the aqueous solution to generate H+ ions in the aqueous solution thereby forming a hypophosphorous acid solution. The process is simple,low cost and high efficient, which can be tied into an existing process for producing sodium hypophosphite wherein the product of sodium hypophosphite process is used as a starting material in the hypophosphorous acid process.

  20. REACTIVE EXTRACTION OF TARTARIC ACID

    Directory of Open Access Journals (Sweden)

    Natalia Marchitan

    2009-12-01

    Full Text Available The present paper describes the results of reactive extraction of tartaric acid in model systems, which can be used for its separation from secondary wine products. As extractant have been used a normal/isododecyl mixed secondary amine Amberlite LA-2. The following parameters of the separation process have been varied: nature of diluent and modifier; modifier concentration; concentration, temperature and pH of the tartaric acid solution and the stirring time, and the work intervals have been established. It was concluded that in determinated conditions the extent of tartaric acid extraction attains value 85-95%.