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Sample records for achieve cryptic coloration

  1. Cryptic female preference for colorful males in guppies.

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    Pilastro, Andrea; Simonato, Martina; Bisazza, Angelo; Evans, Jonathan P

    2004-03-01

    Cryptic female choice (CFC) refers to female-mediated processes occurring during or after copulation that result in biased sperm use in favor of preferred or compatible males. Despite recent empirical support for this hypothesis, evidence that CFC contributes towards the evolution of male body ornaments, in the same way that precopulatory female choice does, is currently lacking. Here, we tested the possibility that CFC selects for increased male attractiveness in the guppy Poecilia reticulata, a freshwater fish exhibiting internal fertilization. Specifically, we examined whether females are able to manipulate the number of sperm transferred or retained at copulation in favor of relatively attractive males. In support of this prediction, we found that following solicited copulations the number of sperm inseminated is influenced exclusively by the female's perception of relative male coloration, independent of any direct manipulation of males themselves. Because females prefer brightly colored males during precopulatory mate choice, our finding that colorful males are also favored as a consequence of enhanced insemination success indicates that cryptic female choice can reinforce precopulatory preferences for extravagant male ornaments.

  2. Color perception influences microhabitat selection of refugia and affects monitoring success for a cryptic anuran species.

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    Cohen, Bradley S; MacKenzie, Michelle L; Maerz, John C; Farrell, Christopher B; Castleberry, Steven B

    2016-10-01

    Perceptual-biases are important for understanding an animal's natural history, identifying potential ecological traps, and for developing effective means to monitor individuals and populations. Despite research demonstrating anurans having a positive phototactic response towards blue colors, we do not yet understand if color cues are used functionally beyond sexual selection. The aim of our study was to determine if color cues are used in selecting microhabitat, and if anuran's blue-positive phototactic response could increase selection of artificial PVC refugia used to monitor cryptic camouflaging anuran species. We captured 32 Cope's Gray Treefrogs and placed them in mesh enclosures with three PVC tubes painted blue, brown, and white. Concurrently, we placed blue, brown, or unpainted white PVC tubes in stratified arrays around a treefrog breeding pond, and counted the number of occasions treefrogs occupied different colored PVC tubes. In the confined choice experiment, treefrogs selected blue tubes (48.3%) significantly more often than brown (28.5%) or white (23.2%) tubes. Our field experiment mirrored these findings (52.0% of capture events in blue, 29.0% in brown, and 19.0% in unpainted white tubes). Our results suggest color influences Cope's Gray Treefrog microhabitat selection, and they utilize color vision when choosing refugia. We demonstrate simple, small changes based on perceptual-biases can induce behaviors that may in turn have large impacts on sampling techniques used in monitoring and inventorying. Incorporating non-traditional physiological measures into animal inventorying and monitoring programs can be used in the future to improve conservation efforts.

  3. Cryptically patterned moths perceive bark structure when choosing body orientations that match wing color pattern to the bark pattern.

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    Chang-Ku Kang

    Full Text Available Many moths have wing patterns that resemble bark of trees on which they rest. The wing patterns help moths to become camouflaged and to avoid predation because the moths are able to assume specific body orientations that produce a very good match between the pattern on the bark and the pattern on the wings. Furthermore, after landing on a bark moths are able to perceive stimuli that correlate with their crypticity and are able to re-position their bodies to new more cryptic locations and body orientations. However, the proximate mechanisms, i.e. how a moth finds an appropriate resting position and orientation, are poorly studied. Here, we used a geometrid moth Jankowskia fuscaria to examine i whether a choice of resting orientation by moths depends on the properties of natural background, and ii what sensory cues moths use. We studied moths' behavior on natural (a tree log and artificial backgrounds, each of which was designed to mimic one of the hypothetical cues that moths may perceive on a tree trunk (visual pattern, directional furrow structure, and curvature. We found that moths mainly used structural cues from the background when choosing their resting position and orientation. Our findings highlight the possibility that moths use information from one type of sensory modality (structure of furrows is probably detected through tactile channel to achieve crypticity in another sensory modality (visual. This study extends our knowledge of how behavior, sensory systems and morphology of animals interact to produce crypsis.

  4. The Role of Color Vision Anomalies in Elementary School Achievement

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    Mandola, John

    1969-01-01

    Results of a study involving 13 color-deficient and 15 color-normal pupils in grades three through six, show no evidence of relationship between color vision and achievement. Supports findings of previous studies by Lorenz and McClure (1935), and Shearron (1965). (CJ)

  5. Use of Hyperspectral Imagery to Assess Cryptic Color Matching in Sargassum Associated Crabs.

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    Russell, Brandon J; Dierssen, Heidi M

    2015-01-01

    Mats of the pelagic macroalgae Sargassum represent a complex environment for the study of marine camouflage at the air-sea interface. Endemic organisms have convergently evolved similar colors and patterns, but quantitative assessments of camouflage strategies are lacking. Here, spectral camouflage of two crab species (Portunus sayi and Planes minutus) was assessed using hyperspectral imagery (HSI). Crabs matched Sargassum reflectance across blue and green wavelengths (400-550 nm) and diverged at longer wavelengths. Maximum discrepancy was observed in the far-red (i.e., 675 nm) where Chlorophyll a absorption occurred in Sargassum and not the crabs. In a quantum catch color model, both crabs showed effective color matching against blue/green sensitive dichromat fish, but were still discernible to tetrachromat bird predators that have visual sensitivity to far red wavelengths. The two species showed opposing trends in background matching with relation to body size. Variation in model parameters revealed that discrimination of crab and background was impacted by distance from the predator, and the ratio of cone cell types for bird predators. This is one of the first studies to detail background color matching in this unique, challenging ecosystem at the air-sea interface.

  6. Effect of Color-Coded Notation on Music Achievement of Elementary Instrumental Students.

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    Rogers, George L.

    1991-01-01

    Presents results of a study of color-coded notation to teach music reading to instrumental students. Finds no clear evidence that color-coded notation enhances achievement on performing by memory, sight-reading, or note naming. Suggests that some students depended on the color-coding and were unable to read uncolored notation well. (DK)

  7. The Impact of Color-Coding Freshmen Integrated-Science Assignments on Student Achievement

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    Sturdivant Allen, Anita Kay

    Students in Grade 9 exhibit high rates of grade retention and absenteeism. Educators have used different strategies that will increase the achievement of those students. The purpose of this study was to determine whether a relationship existed between student achievement and the strategy to use colored paper for Grade 9 science assignments and tests. Itten's color theory provided the theoretical framework. Itten was one of the first researchers to explore the notion that the human eye can detect wavelengths as colors and that those colors can engage and create order in the human brain. A sample of students assigned to 4 classroom teachers at one high school who volunteered to take part in the study for 18 weeks were used in this quantitative study. Teachers administered student assessments on blue, green, yellow, and white paper. Each class was assigned 1 of the 4 colors for 4.5 weeks. The classes were then assigned a different color for the same length of time until each class had exposure to all 4 colors. Physical science exams given to students in the same grade or subject were used as the dependent variable. An ANOVA indicated that the groups using blue paper scored the highest on the physical science exams; students who used white paper earned the lowest scores. When comparing all 3 groups using colored paper (all three colored paper groups combined into one group) to the white paper groups, t-test results indicated that students using any colored paper scored higher than students using white paper. Further research on the impact of colored paper on student academic performance is necessary. Implications for positive social change indicate that new knowledge about instructional tools that impact student achievement deserves more attention.

  8. Sequence variation in the melanocortin-1 receptor (MC1R pigmentation gene and its role in the cryptic coloration of two South American sand lizards

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    Josmael Corso

    2012-01-01

    Full Text Available In reptiles, dorsal body darkness often varies with substrate color or temperature environment, and is generally presumed to be an adaptation for crypsis or thermoregulation. However, the genetic basis of pigmentation is poorly known in this group. In this study we analyzed the coding region of the melanocortin-1-receptor (MC1R gene, and therefore its role underlying the dorsal color variation in two sympatric species of sand lizards (Liolaemus that inhabit the southeastern coast of South America: L. occipitalis and L. arambarensis. The first is light-colored and occupies aeolic pale sand dunes, while the second is brownish and lives in a darker sandy habitat. We sequenced 630 base pairs of MC1R in both species. In total, 12 nucleotide polymorphisms were observed, and four amino acid replacement sites, but none of them could be associated with a color pattern. Comparative analysis indicated that these taxa are monomorphic for amino acid sites that were previously identified as functionally important in other reptiles. Thus, our results indicate that MC1R is not involved in the pigmentation pattern observed in Liolaemus lizards. Therefore, structural differences in other genes, such as ASIP, or variation in regulatory regions of MC1R may be responsible for this variation. Alternatively, the phenotypic differences observed might be a consequence of non-genetic factors, such as thermoregulatory mechanisms.

  9. The Influence of School Factors on Racial Opportunity Cost for High-Achieving Students of Color

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    Venzant Chambers, Terah T.; Huggins, Kristin Shawn

    2014-01-01

    Previous work on racial opportunity cost--that is, the price that students of color pay in their pursuit of academic success--is extended here using organizational culture literature to more closely explore the interplay of school culture with the racial opportunity cost experienced by the study participants. Eighteen African American and Latina/o…

  10. Achievements and perspectives in biochemistry concerning anthocyanin modification for blue flower coloration.

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    Sasaki, Nobuhiro; Nakayama, Toru

    2015-01-01

    Genetic engineering of roses and other plants of floricultural importance to give them a truly blue petal color is arguably one of the holy grails of plant biotechnology. Toward this goal, bluish carnations and roses were previously engineered by establishing an exclusive accumulation of delphinidin (Dp)-type anthocyanins in their petals via the heterologous expression of a flavonoid 3',5'-hydroxylase gene. Very recently, purple-blue varieties of chrysanthemums were also genetically engineered via a similar biochemical strategy. Although the floral colors of these transgenic plants still lack a true blue color, the basis for the future molecular breeding of truly blue flowers is via the engineering of anthocyanin pathways. Anthocyanins with multiple aromatic acyl groups (often referred to as polyacylated anthocyanins) in the 3'- or 7-position tend to display a more stable blue color than non-acylated anthocyanins. The 7-polyacylation process during the biosynthesis of purple-blue anthocyanins in delphinium (Delphinium grandiflorum) was found to occur in vacuoles using acyl-glucose as both the glucosyl and acyl donor. Glucosyltransferases and acyltransferases involved in anthocyanin 7-polyacylation in delphinium are vacuolar acyl-glucose-dependent enzymes belonging to the glycoside hydrolase family 1 and serine carboxypeptidae-like protein family, respectively. The 7-polyacylation proceeds through the alternate glucosylation and p-hydroxybenzoylation catalyzed by these enzymes. p-Hydroxybenzoyl-glucose serves as the p-hydroxybenzoyl and glucosyl donor to produce anthocyanins modified with a p-hydroxybenzoyl-glucose concatemer at the 7-position. This novel finding has provided a potential breakthrough for the genetic engineering of truly blue flowers, where polyacylated Dp-type anthocyanins are accumulated exclusively in the petals. © The Author 2014. Published by Oxford University Press on behalf of Japanese Society of Plant Physiologists. All rights reserved. For

  11. ROLE OF COLOR TO SUPPORT THE ACHIEVEMENT OF RELAXATION IN BUSSINES HOTEL (CASE STUDIES OF BUSINESS HOTEL IN SEMARANG

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    Adel Issa Elsosan

    2015-12-01

    Full Text Available Semarang sebagai pusat bisnis dan pariwisata di Jawa Tengah memberikan kesempatan bagi investor untuk berinvestasi di Semarang. Akhir-akhir ini bisnis perhotelan di Kota Semarang menunjukkan prospek cerah. Hal ini dapat dilihat dari meningkatnya jumlah wisatawan yang menginap di hotel. Salah satu alasannya adalah banyak kegiatan seperti pertemuan yang diselenggarakan oleh instansi pemerintah, baik lokal maupun nasional, yang diselenggarakan di kota Semarang. Berdasarkan hasil survei awal, sebagian besar hotel di Semarang masih minim fasilitas dan tidak berlaku pentingnya pelaksanaan warna bagi pengunjung. Studi tentang peran warna untuk mencapai relaksasi ini penting karena jika relaksasi mencapai sehingga manusia dapat membuat lebih konsentrasi dan merasa menyegarkan. Tujuan dari penelitian ini adalah: Studi tentang bagaimana warna mempengaruhi dalam penciptaan relaksasi di hotel bisnis di Semarang. Sampel penelitian diarahkan ke hotel menggunakan warna dingin dan hotel warna hangat di Semarang. Metode analisis yang digunakan adalah analisis deskriptif. Berdasarkan hasil dan analisis, kesimpulan dalam penelitian ini adalah: (1 Warna dalam menciptakan relaksasi sangat penting bagi responden dan kedua warna dingin dan warna hangat dapat membuat dan menciptakan relaksasi. (2 Hal-hal yang mempengaruhi pemilihan warna untuk meningkatkan bisnis hotel adalah tujuan untuk tinggal di hotel, pertimbangan ini untuk bekerja dan nilai pribadi seperti liburan, juga relaksasi. [Title: Role of Color to Support The Achievement of Relaxation in Bussines Hotel (Case Studies of Business Hotel in Semarang] Semarang as a business and tourism hub in Central Java provides an opportunity for investors to invest in Semarang. Lately the hospitality business in the city of Semarang show bright prospects. It can be seen from the increasing number of tourists who stay at the hotel. One reason is that many activities such as meetings held by government agencies, both local

  12. Topics in Current Science Research: Closing the Achievement Gap for Under Resourced Students of Color

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    Loya Villalpando, Alvaro; Daal, Miguel; Phipps, Arran; Speller, Danielle; Sadoulet, Bernard; Winheld, Rachel; Cryogenic Dark Matter Search Collaboration

    2015-04-01

    Topics in Current Science Research (TCSR) is a five-week summer course offered at the University of California, Berkeley through a collaboration between the Level Playing Field Institute's Summer Math and Science Honors Academy (SMASH) Program and the Cryogenic Dark Matter Search (CDMS) group at UC Berkeley. SMASH is an academic enrichment program geared towards under-resourced, high school students of color. The goals of the course are to expand the students' conception of STEM, to teach the students that science is a method of inquiry and not just a collection of facts that are taught in school, and to expose the scholars to critical thinking within a scientific setting. The course's curriculum engages the scholars in hands-on scientific research, project proposal writing, and presentation of their scientific work to their peers as well as to a panel of UC Berkeley scientists. In this talk, we describe the course and the impact it has had on previous scholars, we discuss how the course's pedagogy has evolved over the past 10 years to enhance students' perception and understanding of science, and we present previous participants' reflections and feedback about the course and its success in providing high school students a genuine research experience at the university level.

  13. Relative effects of plumage coloration and vegetation density on nest success

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    Miller, M.W.

    1999-01-01

    Many passerine species are highly dichromatic with brightly-colored males and cryptically-colored females. Bright plumage in males is commonly thought to arise as a result of sexual selection by females such that males with bright coloration possess high fitness. However, bright plumage potentially could expose males to increased predation risk. Consistent with this idea, males of many highly dichromatic passerine species do not incubate. I tested whether brightly-colored males avoid incubation to reduce the probability of visual predators locating their nest. This hypothesis predicts greater hatching success for clutches incubated by cryptically-colored individuals than by brightly-colored individuals. The Northern Cardinal (Cardinalis cardinalis) is a common dichromatic species that breeds throughout the eastern U.S. I placed two button-quail (Turnix st).) eggs in each of 203 simulated cardinal nests. Dull brown cardboard, simulating a female cardinal, was placed over about half of all clutches. Bright red cardboard, simulating a male cardinal, was placed over the other clutches. Nest success was highest for well-concealed nests (87%) and lowest for nests in open habitat (54%). Nests containing red cardboard did not have significantly lower success than nests with brown cardboard, nor did I detect a significant color X vegetation-density interaction. My analysis may have had insufficient power to detect an effect of color on nest success; alternatively, brightly-colored males that do not incubate may achieve benefits unrelated to predation risk.

  14. Cryptic exposure to arsenic.

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    Rossy, Kathleen M; Janusz, Christopher A; Schwartz, Robert A

    2005-01-01

    Arsenic is an odorless, colorless and tasteless element long linked with effects on the skin and viscera. Exposure to it may be cryptic. Although human intake can occur from four forms, elemental, inorganic (trivalent and pentavalent arsenic) and organic arsenic, the trivalent inorganic arsenicals constitute the major human hazard. Arsenic usually reaches the skin from occupational, therapeutic, or environmental exposure, although it still may be employed as a poison. Occupations involving new technologies are not exempt from arsenic exposure. Its acute and chronic effects are noteworthy. Treatment options exist for arsenic-induced pathology, but prevention of toxicity remains the main focus. Vitamin and mineral supplementation may play a role in the treatment of arsenic toxicity.

  15. Cryptic exposure to arsenic

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    Rossy Kathleen

    2005-01-01

    Full Text Available Arsenic is an odorless, colorless and tasteless element long linked with effects on the skin and viscera. Exposure to it may be cryptic. Although human intake can occur from four forms, elemental, inorganic (trivalent and pentavalent arsenic and organic arsenic, the trivalent inorganic arsenicals constitute the major human hazard. Arsenic usually reaches the skin from occupational, therapeutic, or environmental exposure, although it still may be employed as a poison. Occupations involving new technologies are not exempt from arsenic exposure. Its acute and chronic effects are noteworthy. Treatment options exist for arsenic-induced pathology, but prevention of toxicity remains the main focus. Vitamin and mineral supplementation may play a role in the treatment of arsenic toxicity.

  16. Cryptic female Strawberry poison frogs experience elevated predation risk when associating with an aposematic partner.

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    Segami Marzal, Julia Carolina; Rudh, Andreas; Rogell, Björn; Ödeen, Anders; Løvlie, Hanne; Rosher, Charlotte; Qvarnström, Anna

    2017-01-01

    Population divergence in sexual signals may lead to speciation through prezygotic isolation. Sexual signals can change solely due to variation in the level of natural selection acting against conspicuousness. However, directional mate choice (i.e., favoring conspicuousness) across different environments may lead to gene flow between populations, thereby delaying or even preventing the evolution of reproductive barriers and speciation. In this study, we test whether natural selection through predation upon mate-choosing females can favor corresponding changes in mate preferences. Our study system, Oophaga pumilio, is an extremely color polymorphic neotropical frog with two distinctive antipredator strategies: aposematism and crypsis. The conspicuous coloration and calling behavior of aposematic males may attract both cryptic and aposematic females, but predation may select against cryptic females choosing aposematic males. We used an experimental approach where domestic fowl were encouraged to find digitized images of cryptic frogs at different distances from aposematic partners. We found that the estimated survival time of a cryptic frog was reduced when associating with an aposematic partner. Hence, predation may act as a direct selective force on female choice, favoring evolution of color assortative mating that, in turn, may strengthen the divergence in coloration that natural selection has generated.

  17. The great repression: chromatin and cryptic transcription.

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    Hennig, Bianca P; Fischer, Tamás

    2013-01-01

    The eukaryotic chromatin structure is essential in correctly defining transcription units. Impairing this structure can activate cryptic promoters, and lead to the accumulation of aberrant RNA transcripts. Here we discuss critical pathways that are responsible for the repression of cryptic transcription and the maintenance of genome integrity.

  18. Role of cryptic genes in microbial evolution.

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    Hall, B G; Yokoyama, S; Calhoun, D H

    1983-12-01

    Cryptic genes are phenotypically silent DNA sequences, not normally expressed during the life cycle of an individual. They may, however, be activated in a few individuals of a large population by mutation, recombination, insertion elements, or other genetic mechanisms. A consideration of the microbial literature concerning biochemical evolution, physiology, and taxonomy provides the basis for a hypothesis of microbial adaptation and evolution by mutational activation of cryptic genes. Evidence is presented, and a mathematical model is derived, indicating that powerful and biologically important mechanisms exist to prevent the loss of cryptic genes. We propose that cryptic genes persist as a vital element of the genetic repertoire, ready for recall by mutational activation in future generations. Cryptic genes provide a versatile endogenous genetic reservoir that enhances the adaptive potential of a species by a mechanism that is independent of genetic exchange.

  19. Breaking the Glass Ceiling of Achievement for Low-Income Students and Students of Color. Shattering Expectations Series

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    Bromberg, Marni; Theokas, Christina

    2013-01-01

    Typically, achievement gaps between groups of students are measured as either differences in average scores or differences in proficiency rates. But, practitioners, policymakers, and researchers have long recognized that these approaches don't tell the whole story. Average scores, for example, are good at summarizing trends but can mask real…

  20. Variation in phenotype, parasite load and male competitive ability across a cryptic hybrid zone.

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    Devi Stuart-Fox

    Full Text Available BACKGROUND: Molecular genetic studies are revealing an increasing number of cryptic lineages or species, which are highly genetically divergent but apparently cannot be distinguished morphologically. This observation gives rise to three important questions: 1 have these cryptic lineages diverged in phenotypic traits that may not be obvious to humans; 2 when cryptic lineages come into secondary contact, what are the evolutionary consequences: stable co-existence, replacement, admixture or differentiation and 3 what processes influence the evolutionary dynamics of these secondary contact zones? METHODOLOGY/PRINCIPAL FINDINGS: To address these questions, we first tested whether males of the Iberian lizard Lacerta schreiberi from two highly genetically divergent, yet morphologically cryptic lineages on either side of an east-west secondary contact could be differentiated based on detailed analysis of morphology, coloration and parasite load. Next, we tested whether these differences could be driven by pre-copulatory intra-sexual selection (male-male competition. Compared to eastern males, western males had fewer parasites, were in better body condition and were more intensely coloured. Although subtle environmental variation across the hybrid zone could explain the differences in parasite load and body condition, these were uncorrelated with colour expression, suggesting that the differences in coloration reflect heritable divergence. The lineages did not differ in their aggressive behaviour or competitive ability. However, body size, which predicted male aggressiveness, was positively correlated with the colour traits that differed between genetic backgrounds. CONCLUSIONS/SIGNIFICANCE: Our study confirms that these cryptic lineages differ in several aspects that are likely to influence fitness. Although there were no clear differences in male competitive ability, our results suggest a potential indirect role for intra-sexual selection. Specifically

  1. Color: Implications in dentistry

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    Sikri Vimal

    2010-01-01

    Full Text Available The success of restorative dentistry is determined on the basis of functional and esthetic results. To achieve esthetics, four basic determinants are required in sequence; viz., position, contour, texture and color. The knowledge of the concept of color is essential for achieving good esthetics. This review compiles the various aspects of color, its measurements and shade matching in dentistry.

  2. Error Filtering Schemes for Color Images in Visual Cryptography

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    Shiny Malar F.R

    2011-11-01

    Full Text Available The color visual cryptography methods are free from the limitations of randomness on color images. The two basic ideas used are error diffusion and pixel synchronization. Error diffusion is a simple method, in which the quantization error at each pixel level is filtered and fed as the input to the next pixel. In this way low frequency that is obtained between the input and output image is minimized which in turn give quality images. Degradation of colors are avoided with the help of pixel synchronization. The proposal of this work presents an efficient color image visual cryptic filtering scheme to improve the image quality on restored original image from visual cryptic shares. The proposed color image visual cryptic filtering scheme presents a deblurring effect on the non-uniform distribution of visual cryptic share pixels. After eliminating blurring effects on the pixels, Fourier transformation is applied to normalize the unevenly transformed share pixels on the original restored image. This in turn improves the quality of restored visual cryptographic image to its optimality. In addition the overlapping portions of the two or multiple visual cryptic shares are filtered out with homogeneity of pixel texture property on the restored original image. Experimentation are conducted with standard synthetic and real data set images, which shows better performance of proposed color image visual cryptic filtering scheme measured in terms of PSNR value (improved to 3 times and share pixel error rate (reduced to nearly 11% with existing grey visual cryptic filters. The results showed that the noise effects such as blurring on the restoration of original image are removed completely.

  3. South Polar Cryptic Terrain in Early Spring

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    2007-01-01

    This image of the south polar region of Mars was taken by the Compact Reconnaissance Imaging Spectrometer for Mars (CRISM) at 1557 UTC (10:57 a.m. EST) on Feb. 10, 2007, near 77.55 degrees south latitude, 131.98 degrees east longitude. CRISM's image was taken in 544 colors covering 0.36-3.92 micrometers, and shows features as small as 30 meters (98 feet) across. The region covered is just over 9 kilometers (5.6 miles) wide at its narrowest point, and is one of several in which CRISM is monitoring the evaporation (or 'sublimation') of the seasonal frost cap. The Martian south polar seasonal cap consists of carbon dioxide ice and frost, whose sublimation in the Martian spring creates a variety of features unlike anything in Earth's circumpolar regions. Part of the cap known as the 'cryptic region' is so cold that it must be covered with carbon dioxide frost, but it is also unexpectedly low in brightness and exhibits a variety of unusual dark blotches. Many scientists believe that carbon dioxide gas trapped below the sublimating ice is released in bursts, which carry along dust that gradually darkens the ice. One idea is that geyser-like dust eruptions form the dark blotches, and that the blotches grow, coalesce, and eventually hide the frost under a thin layer of dust. This image was taken shortly after sunrise with the Sun only about five degrees above the horizon. The left version shows brightness of the surface at 1.3 micrometers. The right version shows strength of an absorption band due to carbon dioxide frost at 1.435 micrometers; brighter areas have a stronger absorption and more carbon dioxide frost. However, even the darkest areas still have frost. The correlation between brightness and carbon dioxide frost abundance is striking, supporting the idea that the frost is being darkened by dust. Frost in the upper right corner shows the expected dark blotches, whereas the frost over the rest of the image is more uniformly dark, hinting that another darkening

  4. Discrimination, crypticity, and incipient taxa in entamoeba.

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    Espinosa, Avelina; Paz-Y-Miño-C, Guillermo

    2012-01-01

    Persistent difficulties in resolving clear lineages in diverging populations of prokaryotes or unicellular eukaryotes (protistan polyphyletic groups) are challenging the classical species concept. Although multiple integrated approaches would render holistic taxonomies, most phylogenetic studies are still based on single-gene or morphological traits. Such methodologies conceal natural lineages, which are considered "cryptic." The concept of species is considered artificial and inadequate to define natural populations. Social organisms display differential behaviors toward kin than to nonrelated individuals. In "social" microbes, kin discrimination has been used to help resolve crypticity. Aggregative behavior could be explored in a nonsocial protist to define phylogenetic varieties that are considered "cryptic." Two Entamoeba invadens strains, IP-1 and VK-1:NS are considered close populations of the same "species." This study demonstrates that IP-1 and VK-1:NS trophozoites aggregate only with alike members and discriminate members of different strains based on behavioral and chemical signals. Combined morphological, behavioral/chemical, and ecological studies could improve Archamoebae phylogenies and define cryptic varieties. Evolutionary processes in which selection acted continuously and cumulatively on ancestors of Entamoeba populations gave rise to chemical and behavioral signals that allowed individuals to discriminate nonpopulation members and, gradually, to the emergence of new lineages; alternative views that claim a "Designer" or "Creator" as responsible for protistan diversity are unfounded.

  5. Fossilized biophotonic nanostructures reveal the original colors of 47-million-year-old moths.

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    Maria E McNamara

    2011-11-01

    Full Text Available Structural colors are generated by scattering of light by variations in tissue nanostructure. They are widespread among animals and have been studied most extensively in butterflies and moths (Lepidoptera, which exhibit the widest diversity of photonic nanostructures, resultant colors, and visual effects of any extant organism. The evolution of structural coloration in lepidopterans, however, is poorly understood. Existing hypotheses based on phylogenetic and/or structural data are controversial and do not incorporate data from fossils. Here we report the first example of structurally colored scales in fossil lepidopterans; specimens are from the 47-million-year-old Messel oil shale (Germany. The preserved colors are generated by a multilayer reflector comprised of a stack of perforated laminae in the scale lumen; differently colored scales differ in their ultrastructure. The original colors were altered during fossilization but are reconstructed based upon preserved ultrastructural detail. The dorsal surface of the forewings was a yellow-green color that probably served as a dual-purpose defensive signal, i.e. aposematic during feeding and cryptic at rest. This visual signal was enhanced by suppression of iridescence (change in hue with viewing angle achieved via two separate optical mechanisms: extensive perforation, and concave distortion, of the multilayer reflector. The fossils provide the first evidence, to our knowledge, for the function of structural color in fossils and demonstrate the feasibility of reconstructing color in non-metallic lepidopteran fossils. Plastic scale developmental processes and complex optical mechanisms for interspecific signaling had clearly evolved in lepidopterans by the mid-Eocene.

  6. Color-induced graph colorings

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    Zhang, Ping

    2015-01-01

    A comprehensive treatment of color-induced graph colorings is presented in this book, emphasizing vertex colorings induced by edge colorings. The coloring concepts described in this book depend not only on the property required of the initial edge coloring and the kind of objects serving as colors, but also on the property demanded of the vertex coloring produced. For each edge coloring introduced, background for the concept is provided, followed by a presentation of results and open questions dealing with this topic. While the edge colorings discussed can be either proper or unrestricted, the resulting vertex colorings are either proper colorings or rainbow colorings. This gives rise to a discussion of irregular colorings, strong colorings, modular colorings, edge-graceful colorings, twin edge colorings and binomial colorings. Since many of the concepts described in this book are relatively recent, the audience for this book is primarily mathematicians interested in learning some new areas of graph colorings...

  7. Color Blindness

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    ... rose in full bloom. If you have a color vision defect, you may see these colors differently than most people. There are three main kinds of color vision defects. Red-green color vision defects are the most ...

  8. Cryptic infertility and therapeutic options.

    Science.gov (United States)

    Check, J H

    2001-01-01

    Too often infertile patients are given a "herd type" fertility investigation which ultimately leads to expensive, time consuming, and risky in vitro fertilization. However, attention to certain simple details available by non-invasive methods, e.g., checking for premature luteinization, luteinized unruptured follicle syndrome, or performing the post-coital test at the appropriate interval, can lead to a quick solution of the infertility problem. Caution about persistent infertility related to iatrogenic factors, e.g., development of poor post-coital tests or excessively thin endometrium from clomiphene citrate, or development of luteinized unruptured follicle syndrome or premature luteinization by taking follicle maturing drugs, or creating a hostile environment from taking follicle maturing drugs when the woman already made a mature follicle (and would have had a higher success rate with luteal phase support with progesterone) will help achieve pregnancies without necessarily proceeding to the most expensive and invasive procedure of in vitro fertilization. Finally, many wasted cycles of treatment could be avoided by including the simple but very important hypo-osmotic swelling test and measurement of sperm autoantibodies with the first initial semen analysis.

  9. Spatial heterogeneity, predator cognition, and the evolution of color polymorphism in virtual prey

    OpenAIRE

    Bond, Alan B.; Kamil, Alan C.

    2006-01-01

    Cryptically colored prey species are often polymorphic, occurring in multiple distinctive pattern variants. Visual predators promote such phenotypic variation through apostatic selection, in which they attack more abundant prey types disproportionately often. In heterogeneous environments, disruptive selection to match the coloration of disparate habitat patches could also produce polymorphism, but how apostatic and disruptive selection interact in these circumstances is unknown. Here we repo...

  10. Quantitative analysis of cryptic splicing associated with TDP-43 depletion.

    Science.gov (United States)

    Humphrey, Jack; Emmett, Warren; Fratta, Pietro; Isaacs, Adrian M; Plagnol, Vincent

    2017-05-26

    Reliable exon recognition is key to the splicing of pre-mRNAs into mature mRNAs. TDP-43 is an RNA-binding protein whose nuclear loss and cytoplasmic aggregation are a hallmark pathology in amyotrophic lateral sclerosis and frontotemporal dementia (ALS/FTD). TDP-43 depletion causes the aberrant inclusion of cryptic exons into a range of transcripts, but their extent, relevance to disease pathogenesis and whether they are caused by other RNA-binding proteins implicated in ALS/FTD are unknown. We developed an analysis pipeline to discover and quantify cryptic exon inclusion and applied it to publicly available human and murine RNA-sequencing data. We detected widespread cryptic splicing in TDP-43 depletion datasets but almost none in another ALS/FTD-linked protein FUS. Sequence motif and iCLIP analysis of cryptic exons demonstrated that they are bound by TDP-43. Unlike the cryptic exons seen in hnRNP C depletion, those repressed by TDP-43 cannot be linked to transposable elements. Cryptic exons are poorly conserved and inclusion overwhelmingly leads to nonsense-mediated decay of the host transcript, with reduced transcript levels observed in differential expression analysis. RNA-protein interaction data on 73 different RNA-binding proteins showed that, in addition to TDP-43, 7 specifically bind TDP-43 linked cryptic exons. This suggests that TDP-43 competes with other splicing factors for binding to cryptic exons and can repress cryptic exon inclusion. Our quantitative analysis pipeline confirms the presence of cryptic exons during the depletion of TDP-43 but not FUS providing new insight into to RNA-processing dysfunction as a cause or consequence in ALS/FTD.

  11. Cryptic speciation in a model invertebrate chordate.

    Science.gov (United States)

    Caputi, Luigi; Andreakis, Nikos; Mastrototaro, Francesco; Cirino, Paola; Vassillo, Mauro; Sordino, Paolo

    2007-05-29

    We applied independent species concepts to clarify the phylogeographic structure of the ascidian Ciona intestinalis, a powerful model system in chordate biology and for comparative genomic studies. Intensive research with this marine invertebrate is based on the assumption that natural populations globally belong to a single species. Therefore, understanding the true taxonomic classification may have implications for experimental design and data management. Phylogenies inferred from mitochondrial and nuclear DNA markers accredit the existence of two cryptic species: C. intestinalis sp. A, genetically homogeneous, distributed in the Mediterranean, northeast Atlantic, and Pacific, and C. intestinalis sp. B, geographically structured and encountered in the North Atlantic. Species-level divergence is further entailed by cross-breeding estimates. C. intestinalis A and B from allopatric populations cross-fertilize, but hybrids remain infertile because of defective gametogenesis. Although anatomy illustrates an overall interspecific similarity lacking in diagnostic features, we provide consistent tools for in-field and in-laboratory species discrimination. Finding of two cryptic taxa in C. intestinalis raises interest in a new tunicate genome as a gateway to studies in speciation and ecological adaptation of chordates.

  12. Familial cryptic translocation in Angelman syndrome

    Energy Technology Data Exchange (ETDEWEB)

    Weyerts, L.K.; Wiley, J.E.; Loud, K.M. [ECU School of Medicine, Greenville, NC (United States)] [and others

    1994-09-01

    The majority of patients with Angelman syndrome have been shown to have a cytogenetic or molecular deletion on the maternally derived chromosome 15. We report on a case of Angelman syndrome in which this deletion occurs as an unbalanced cryptic translocation involving chromosomes 14 and 15. The proband was diagnosed clinically as having Angelman syndrome. Multiple cytogenetic studies were done without detecting any deletion. When DNA probes (Oncor) specific for the Prader Willi/Angelman locus became available, the patient was restudied and found to be deleted for {open_quotes}region A{close_quotes} (D15S11) but not for {open_quotes}region B{close_quotes} (GABRB3). No other abnormality was detected. The proband`s mother was then studied. The chromosome 15 marker probe and D15S11 were detected on different chromosomes. Using alpha-satellite probes, a cryptic 14;15 translocation was uncovered. This balanced translocation was also found to be carried by the sister of the proband. This case, along with a case presented at the 1993 ASHG meeting, illustrates the need for using acrocentric probes when studying Angelman syndrome patients. The proband was studied using additional probes specific for this region and found to be deleted for SNRPN but not for D15S10. The breakpoint of the translocation in this patient delineates the smallest deletion of the Angelman syndrome region reported to date and therefore may represent the specific gene involved.

  13. Reduction of excess sludge in a sequencing batch reactor by lysis-cryptic growth using quick lime for disintegration under low temperature.

    Science.gov (United States)

    Lv, Xiao-Mei; Song, Ju-Sheng; Li, Ji; Zhai, Kun

    2016-10-06

    In the present study, quick-lime-based thermal-alkaline sludge disintegration (SD) under low temperature was combined with cryptic growth to investigate the excess sludge reduction efficiency in the sequencing batch reactor (SBR). The optimized condition of SD was as follows: T = 80℃, pH = 11, t = 180 min, and the SD rate was about 42.1%. With 65.6% of excess sludge disintegrated and returned to the SBR, the system achieved sludge reduction rate of about 40.1%. The lysis-cryptic growth still obtained satisfactory sludge reduction efficiency despite the comparative low SD rate, which suggested that disintegration rate might not be the decisive factor for cryptic-growth-based sludge reduction. Lysis-cryptic growth did not impact the effluent quality, yet the phosphorus removal performance was enhanced, with effluent total phosphorus concentration decreased by 0.3 mg/L (33%). Crystal compounds of calcium phosphate precipitate were detected in the system by Fourier transform infrared spectroscopy and X-ray diffraction, which indicated the phosphorus removal potential of SD using lime. Moreover, endogenous dehydrogenase activity of activated sludge in the lysis-cryptic system was enhanced, which was beneficial for sludge reduction. SD and cryptic growth in the present study demonstrates an economical and effective approach for sludge reduction.

  14. Cryptic species in putative ancient asexual darwinulids (Crustacea, Ostracoda.

    Directory of Open Access Journals (Sweden)

    Isa Schön

    Full Text Available BACKGROUND: Fully asexually reproducing taxa lack outcrossing. Hence, the classic Biological Species Concept cannot be applied. METHODOLOGY/PRINCIPAL FINDINGS: We used DNA sequences from the mitochondrial COI gene and the nuclear ITS2 region to check species boundaries according to the evolutionary genetic (EG species concept in five morphospecies in the putative ancient asexual ostracod genera, Penthesilenula and Darwinula, from different continents. We applied two methods for detecting cryptic species, namely the K/θ method and the General Mixed Yule Coalescent model (GMYC. We could confirm the existence of species in all five darwinulid morphospecies and additional cryptic diversity in three morphospecies, namely in Penthesilenula brasiliensis, Darwinula stevensoni and in P. aotearoa. The number of cryptic species within one morphospecies varied between seven (P. brasiliensis, five to six (D. stevensoni and two (P. aotearoa, respectively, depending on the method used. Cryptic species mainly followed continental distributions. We also found evidence for coexistence at the local scale for Brazilian cryptic species of P. brasiliensis and P. aotearoa. Our ITS2 data confirmed that species exist in darwinulids but detected far less EG species, namely two to three cryptic species in P. brasiliensis and no cryptic species at all in the other darwinulid morphospecies. CONCLUSIONS/SIGNIFICANCE: Our results clearly demonstrate that both species and cryptic diversity can be recognized in putative ancient asexual ostracods using the EG species concept, and that COI data are more suitable than ITS2 for this purpose. The discovery of up to eight cryptic species within a single morphospecies will significantly increase estimates of biodiversity in this asexual ostracod group. Which factors, other than long-term geographic isolation, are important for speciation processes in these ancient asexuals remains to be investigated.

  15. A strategy for eliciting antibodies against cryptic, conserved, conformationally dependent epitopes of HIV envelope glycoprotein.

    Directory of Open Access Journals (Sweden)

    Hanna C Kelker

    Full Text Available BACKGROUND: Novel strategies are needed for the elicitation of broadly neutralizing antibodies to the HIV envelope glycoprotein, gp120. Experimental evidence suggests that combinations of antibodies that are broadly neutralizing in vitro may protect against challenge with HIV in nonhuman primates, and a small number of these antibodies have been selected by repertoire sampling of B cells and by the fractionation of antiserum from some patients with prolonged disease. Yet no additional strategies for identifying conserved epitopes, eliciting antibodies to these epitopes, and determining whether these epitopes are accessible to antibodies have been successful to date. The defining of additional conserved, accessible epitopes against which one can elicit antibodies will increase the probability that some may be the targets of broadly neutralizing antibodies. METHODOLOGY/PRINCIPAL FINDINGS: We postulate that additional cryptic epitopes of gp120 are present, against which neutralizing antibodies might be elicited even though these antibodies are not elicited by gp120, and that many of these epitopes may be accessible to antibodies should they be formed. We demonstrate a strategy for eliciting antibodies in mice against selected cryptic, conformationally dependent conserved epitopes of gp120 by immunizing with multiple identical copies of covalently linked peptides (MCPs. This has been achieved with MCPs representing 3 different domains of gp120. We show that some cryptic epitopes on gp120 are accessible to the elicited antibodies, and some epitopes in the CD4 binding region are not accessible. The antibodies bind to gp120 with relatively high affinity, and bind to oligomeric gp120 on the surface of infected cells. CONCLUSIONS/SIGNIFICANCE: Immunization with MCPs comprised of selected peptides of HIV gp120 is able to elicit antibodies against conserved, conformationally dependent epitopes of gp120 that are not immunogenic when presented as gp120. Some

  16. Evidence of female cryptic choice in crayfish.

    Science.gov (United States)

    Aquiloni, Laura; Gherardi, Francesca

    2008-04-23

    To test whether male body size affects female reproductive investment in the polygamous crayfish Procambarus clarkii, we described mating behaviour of virgin females paired with either small or large males, and analysed the number, size and weight of both eggs and juveniles sired by either types of male. Along with confirming the overt selection by females of larger mates, we found that the size and weight of both the eggs and the juveniles were higher when sired by larger fathers. This suggests that P. clarkii females exert a form of cryptic choice for large males, seemingly adjusting the quantity of egg deutoplasm in function of the mate body size. The question of why females spend time and energy to brood low-fitness offspring is finally raised.

  17. Drug design from the cryptic inhibitor envelope.

    Science.gov (United States)

    Lee, Chul-Jin; Liang, Xiaofei; Wu, Qinglin; Najeeb, Javaria; Zhao, Jinshi; Gopalaswamy, Ramesh; Titecat, Marie; Sebbane, Florent; Lemaitre, Nadine; Toone, Eric J; Zhou, Pei

    2016-02-25

    Conformational dynamics plays an important role in enzyme catalysis, allosteric regulation of protein functions and assembly of macromolecular complexes. Despite these well-established roles, such information has yet to be exploited for drug design. Here we show by nuclear magnetic resonance spectroscopy that inhibitors of LpxC--an essential enzyme of the lipid A biosynthetic pathway in Gram-negative bacteria and a validated novel antibiotic target--access alternative, minor population states in solution in addition to the ligand conformation observed in crystal structures. These conformations collectively delineate an inhibitor envelope that is invisible to crystallography, but is dynamically accessible by small molecules in solution. Drug design exploiting such a hidden inhibitor envelope has led to the development of potent antibiotics with inhibition constants in the single-digit picomolar range. The principle of the cryptic inhibitor envelope approach may be broadly applicable to other lead optimization campaigns to yield improved therapeutics.

  18. Drug design from the cryptic inhibitor envelope

    Science.gov (United States)

    Lee, Chul-Jin; Liang, Xiaofei; Wu, Qinglin; Najeeb, Javaria; Zhao, Jinshi; Gopalaswamy, Ramesh; Titecat, Marie; Sebbane, Florent; Lemaitre, Nadine; Toone, Eric J.; Zhou, Pei

    2016-01-01

    Conformational dynamics plays an important role in enzyme catalysis, allosteric regulation of protein functions and assembly of macromolecular complexes. Despite these well-established roles, such information has yet to be exploited for drug design. Here we show by nuclear magnetic resonance spectroscopy that inhibitors of LpxC—an essential enzyme of the lipid A biosynthetic pathway in Gram-negative bacteria and a validated novel antibiotic target—access alternative, minor population states in solution in addition to the ligand conformation observed in crystal structures. These conformations collectively delineate an inhibitor envelope that is invisible to crystallography, but is dynamically accessible by small molecules in solution. Drug design exploiting such a hidden inhibitor envelope has led to the development of potent antibiotics with inhibition constants in the single-digit picomolar range. The principle of the cryptic inhibitor envelope approach may be broadly applicable to other lead optimization campaigns to yield improved therapeutics. PMID:26912110

  19. Image composition with color harmonization

    Institute of Scientific and Technical Information of China (English)

    Congde Wang; Rong Zhang; Fan Deng

    2009-01-01

    Image matting and color transfer are combined to achieve image composition.Firstly,digital matting is used to pull out the region of interest.Secondly,taking color harmonization into account,color transfer techniques are introduced in pasting the region onto the target image.Experimental results show that the proposed approach generates visually plea.sing composite images.

  20. Color Blindness

    Institute of Scientific and Technical Information of China (English)

    严双红

    2007-01-01

    About one in 12 boys is color-blind, and one in every 400 girls, so in each school class there are likely to be at least one or two people who are color-blind. Because they are color- blind from birth, most people do not know that they are color-

  1. Tdp-43 cryptic exons are highly variable between cell types.

    Science.gov (United States)

    Jeong, Yun Ha; Ling, Jonathan P; Lin, Sophie Z; Donde, Aneesh N; Braunstein, Kerstin E; Majounie, Elisa; Traynor, Bryan J; LaClair, Katherine D; Lloyd, Thomas E; Wong, Philip C

    2017-02-02

    TDP-43 proteinopathy is a prominent pathological feature that occurs in a number of human diseases including amyotrophic lateral sclerosis (ALS), frontotemporal dementia (FTD), and inclusion body myositis (IBM). Our recent finding that TDP-43 represses nonconserved cryptic exons led us to ask whether cell type-specific cryptic exons could exist to impact unique molecular pathways in brain or muscle. In the present work, we investigated TDP-43's function in various mouse tissues to model disease pathogenesis. We generated mice to conditionally delete TDP-43 in excitatory neurons or skeletal myocytes and identified the cell type-specific cryptic exons associated with TDP-43 loss of function. Comparative analysis of nonconserved cryptic exons in various mouse cell types revealed that only some cryptic exons were common amongst stem cells, neurons, and myocytes; the majority of these nonconserved cryptic exons were cell type-specific. Our results suggest that in human disease, TDP-43 loss of function may impair cell type-specific pathways.

  2. The Economic Benefits of Closing Educational Achievement Gaps: Promoting Growth and Strengthening the Nation by Improving the Educational Outcomes of Children of Color

    Science.gov (United States)

    Lynch, Robert G.; Oakford, Patrick

    2014-01-01

    Our nation is currently experiencing growing levels of income and wealth inequality, which are contributing to longstanding racial and ethnic gaps in education outcomes and other areas. This report quantifies the economic benefits of closing one of the most harmful racial and ethnic gaps: the educational achievement gap that exists between black…

  3. Cryptic Genetic Variation in Evolutionary Developmental Genetics

    Directory of Open Access Journals (Sweden)

    Annalise B. Paaby

    2016-06-01

    Full Text Available Evolutionary developmental genetics has traditionally been conducted by two groups: Molecular evolutionists who emphasize divergence between species or higher taxa, and quantitative geneticists who study variation within species. Neither approach really comes to grips with the complexities of evolutionary transitions, particularly in light of the realization from genome-wide association studies that most complex traits fit an infinitesimal architecture, being influenced by thousands of loci. This paper discusses robustness, plasticity and lability, phenomena that we argue potentiate major evolutionary changes and provide a bridge between the conceptual treatments of macro- and micro-evolution. We offer cryptic genetic variation and conditional neutrality as mechanisms by which standing genetic variation can lead to developmental system drift and, sheltered within canalized processes, may facilitate developmental transitions and the evolution of novelty. Synthesis of the two dominant perspectives will require recognition that adaptation, divergence, drift and stability all depend on similar underlying quantitative genetic processes—processes that cannot be fully observed in continuously varying visible traits.

  4. Silencing of cryptic prophages in Corynebacterium glutamicum.

    Science.gov (United States)

    Pfeifer, Eugen; Hünnefeld, Max; Popa, Ovidiu; Polen, Tino; Kohlheyer, Dietrich; Baumgart, Meike; Frunzke, Julia

    2016-12-01

    DNA of viral origin represents a ubiquitous element of bacterial genomes. Its integration into host regulatory circuits is a pivotal driver of microbial evolution but requires the stringent regulation of phage gene activity. In this study, we describe the nucleoid-associated protein CgpS, which represents an essential protein functioning as a xenogeneic silencer in the Gram-positive Corynebacterium glutamicum CgpS is encoded by the cryptic prophage CGP3 of the C. glutamicum strain ATCC 13032 and was first identified by DNA affinity chromatography using an early phage promoter of CGP3. Genome-wide profiling of CgpS binding using chromatin affinity purification and sequencing (ChAP-Seq) revealed its association with AT-rich DNA elements, including the entire CGP3 prophage region (187 kbp), as well as several other elements acquired by horizontal gene transfer. Countersilencing of CgpS resulted in a significantly increased induction frequency of the CGP3 prophage. In contrast, a strain lacking the CGP3 prophage was not affected and displayed stable growth. In a bioinformatics approach, cgpS orthologs were identified primarily in actinobacterial genomes as well as several phage and prophage genomes. Sequence analysis of 618 orthologous proteins revealed a strong conservation of the secondary structure, supporting an ancient function of these xenogeneic silencers in phage-host interaction.

  5. Cryptic cuckoo eggs hide from competing cuckoos.

    Science.gov (United States)

    Gloag, Ros; Keller, Laurie-Anne; Langmore, Naomi E

    2014-10-07

    Interspecific arms races between cuckoos and their hosts have produced remarkable examples of mimicry, with parasite eggs evolving to match host egg appearance and so evade removal by hosts. Certain bronze-cuckoo species, however, lay eggs that are cryptic rather than mimetic. These eggs are coated in a low luminance pigment that camouflages them within the dark interiors of hosts' nests. We investigated whether cuckoo egg crypsis is likely to have arisen from the same coevolutionary processes known to favour egg mimicry. We added high and low luminance-painted eggs to the nests of large-billed gerygones (Gerygone magnirostris), a host of the little bronze-cuckoo (Chalcites minutillus). Gerygones rarely rejected either egg type, and did not reject natural cuckoo eggs. Cuckoos, by contrast, regularly removed an egg from clutches before laying their own and were five times more likely to remove a high luminance model than its low luminance counterpart. Given that we found one-third of all parasitized nests were exploited by multiple cuckoos, our results suggest that competition between cuckoos has been the key selective agent for egg crypsis. In such intraspecific arms races, crypsis may be favoured over mimicry because it can reduce the risk of egg removal to levels below chance.

  6. Cryptic Genetic Variation in Evolutionary Developmental Genetics.

    Science.gov (United States)

    Paaby, Annalise B; Gibson, Greg

    2016-06-13

    Evolutionary developmental genetics has traditionally been conducted by two groups: Molecular evolutionists who emphasize divergence between species or higher taxa, and quantitative geneticists who study variation within species. Neither approach really comes to grips with the complexities of evolutionary transitions, particularly in light of the realization from genome-wide association studies that most complex traits fit an infinitesimal architecture, being influenced by thousands of loci. This paper discusses robustness, plasticity and lability, phenomena that we argue potentiate major evolutionary changes and provide a bridge between the conceptual treatments of macro- and micro-evolution. We offer cryptic genetic variation and conditional neutrality as mechanisms by which standing genetic variation can lead to developmental system drift and, sheltered within canalized processes, may facilitate developmental transitions and the evolution of novelty. Synthesis of the two dominant perspectives will require recognition that adaptation, divergence, drift and stability all depend on similar underlying quantitative genetic processes-processes that cannot be fully observed in continuously varying visible traits.

  7. Ocean Color

    Data.gov (United States)

    National Aeronautics and Space Administration — Satellite-derived Ocean Color Data sets from historical and currently operational NASA and International Satellite missions including the NASA Coastal Zone Color...

  8. Entropy, color, and color rendering.

    Science.gov (United States)

    Price, Luke L A

    2012-12-01

    The Shannon entropy [Bell Syst. Tech J.27, 379 (1948)] of spectral distributions is applied to the problem of color rendering. With this novel approach, calculations for visual white entropy, spectral entropy, and color rendering are proposed, indices that are unreliant on the subjectivity inherent in reference spectra and color samples. The indices are tested against real lamp spectra, showing a simple and robust system for color rendering assessment. The discussion considers potential roles for white entropy in several areas of color theory and psychophysics and nonextensive entropy generalizations of the entropy indices in mathematical color spaces.

  9. Color invariance

    NARCIS (Netherlands)

    Geusebroek, J.M.; van den Boomgaard, R.; Smeulders, A.W.M.; Geerts, H.

    2001-01-01

    This paper presents the measurement of colored object reflectance, under different, general assumptions regarding the imaging conditions. We exploit the Gaussian scale-space paradigm for color images to define a framework for the robust measurement of object reflectance from color images. Object ref

  10. Color Algebras

    Science.gov (United States)

    Mulligan, Jeffrey B.

    2017-01-01

    A color algebra refers to a system for computing sums and products of colors, analogous to additive and subtractive color mixtures. We would like it to match the well-defined algebra of spectral functions describing lights and surface reflectances, but an exact correspondence is impossible after the spectra have been projected to a three-dimensional color space, because of metamerism physically different spectra can produce the same color sensation. Metameric spectra are interchangeable for the purposes of addition, but not multiplication, so any color algebra is necessarily an approximation to physical reality. Nevertheless, because the majority of naturally-occurring spectra are well-behaved (e.g., continuous and slowly-varying), color algebras can be formulated that are largely accurate and agree well with human intuition. Here we explore the family of algebras that result from associating each color with a member of a three-dimensional manifold of spectra. This association can be used to construct a color product, defined as the color of the spectrum of the wavelength-wise product of the spectra associated with the two input colors. The choice of the spectral manifold determines the behavior of the resulting system, and certain special subspaces allow computational efficiencies. The resulting systems can be used to improve computer graphic rendering techniques, and to model various perceptual phenomena such as color constancy.

  11. Multiple rearrangements in cryptic species of electric knifefish, Gymnotus carapo (Gymnotidae, Gymnotiformes revealed by chromosome painting

    Directory of Open Access Journals (Sweden)

    O'Brien Patricia CM

    2010-04-01

    Full Text Available Abstract Background Gymnotus (Gymnotidae, Gymnotiformes is the Neotropical electric fish genus with the largest geographic distribution and the largest number of species, 33 of which have been validated. The diploid number varies from 2n = 39-40 to 2n = 54. Recently we studied the karyotype of morphologically indistinguishable samples from five populations of G. carapo sensu stricto from the Eastern Amazon of Brazil. We found two cytotypes, 2n = 42 (30 M/SM + 12 ST/A and 2n = 40 (34 M/SM + 6 ST/A and we concluded that the differences between the two cryptic species are due to pericentric inversions and one tandem fusion. Results In this study we use for the first time, whole chromosome probes prepared by FACS of the Gymnotus carapo sensu strictu species, cytotype with 2n = 42. Using two color hybridizations we were able to distinguish pairs 1, 2, 3, 7, 9, 14, 16, 18, 19, 20 and 21. It was not possible to separate by FACS and distinguish each of the following chromosome pairs even with dual color FISH: {4,8}; {10,11}; {5,6,17}; {12,13,15}. The FISH probes were then used in chromosome painting experiments on metaphases of the 2n = 40 cytotype. While some chromosomes show conserved synteny, others are rearranged in different chromosomes. Eight syntenic associations were found. Conclusions These results show that the karyotype differences between these cryptic species are greater than assumed by classical cytogenetics. These data reinforce the previous supposition that these two cytotypes are different species, despite the absence of morphological differences. Additionally, the homology of repetitive DNA between the two provides evidence of recent speciation.

  12. Color Categories and Color Appearance

    Science.gov (United States)

    Webster, Michael A.; Kay, Paul

    2012-01-01

    We examined categorical effects in color appearance in two tasks, which in part differed in the extent to which color naming was explicitly required for the response. In one, we measured the effects of color differences on perceptual grouping for hues that spanned the blue-green boundary, to test whether chromatic differences across the boundary…

  13. Color Categories and Color Appearance

    Science.gov (United States)

    Webster, Michael A.; Kay, Paul

    2012-01-01

    We examined categorical effects in color appearance in two tasks, which in part differed in the extent to which color naming was explicitly required for the response. In one, we measured the effects of color differences on perceptual grouping for hues that spanned the blue-green boundary, to test whether chromatic differences across the boundary…

  14. Cryptic Methane Emissions from Upland Forest Ecosystems

    Energy Technology Data Exchange (ETDEWEB)

    Megonigal, Patrick [Smithsonian Institution, Washington, DC (United States); Pitz, Scott [Johns Hopkins Univ., Baltimore, MD (United States); Smithsonian Institution, Washington, DC (United States)

    2016-04-19

    This exploratory research on Cryptic Methane Emissions from Upland Forest Ecosystems was motivated by evidence that upland ecosystems emit 36% as much methane to the atmosphere as global wetlands, yet we knew almost nothing about this source. The long-term objective was to refine Earth system models by quantifying methane emissions from upland forests, and elucidate the biogeochemical processes that govern upland methane emissions. The immediate objectives of the grant were to: (i) test the emerging paradigm that upland trees unexpectedly transpire methane, (ii) test the basic biogeochemical assumptions of an existing global model of upland methane emissions, and (iii) develop the suite of biogeochemical approaches that will be needed to advance research on upland methane emissions. We instrumented a temperate forest system in order to explore the processes that govern upland methane emissions. We demonstrated that methane is emitted from the stems of dominant tree species in temperate upland forests. Tree emissions occurred throughout the growing season, while soils adjacent to the trees consumed methane simultaneously, challenging the concept that forests are uniform sinks of methane. High frequency measurements revealed diurnal cycling in the rate of methane emissions, pointing to soils as the methane source and transpiration as the most likely pathway for methane transport. We propose the forests are smaller methane sinks than previously estimated due to stem emissions. Stem emissions may be particularly important in upland tropical forests characterized by high rainfall and transpiration, resolving differences between models and measurements. The methods we used can be effectively implemented in order to determine if the phenomenon is widespread.

  15. Geochemical evidence for cryptic sulfur cycling in salt marsh sediments

    DEFF Research Database (Denmark)

    Mills, Jennifer V.; Antler, Gilad; Turchyn, Alexandra V.

    2016-01-01

    to represent the salt marsh sediments suggests that the uptake rate of sulfate during this cryptic sulfur cycling is similar to the uptake rate of sulfate during the fastest microbial sulfate reduction that has been measured in the natural environment. The difference is that during cryptic sulfur cycling, all...... investigate sulfur cycling in salt marsh sediments from Norfolk, England where we observe high ferrous iron concentrations with no depletion of sulfate or change in the sulfur isotope ratio of that sulfate, but a 5‰ increase in the oxygen isotope ratio in sulfate, indicating that sulfate has been through...... a reductive cycle replacing its oxygen atoms. This cryptic sulfur cycle was replicated in laboratory incubations using 18O-enriched water, demonstrating that the field results do not solely result from mixing processes in the natural environment. Numerical modeling of the laboratory incubations scaled...

  16. Color Analysis

    Science.gov (United States)

    Wrolstad, Ronald E.; Smith, Daniel E.

    Color, flavor, and texture are the three principal quality attributes that determine food acceptance, and color has a far greater influence on our judgment than most of us appreciate. We use color to determine if a banana is at our preferred ripeness level, and a discolored meat product can warn us that the product may be spoiled. The marketing departments of our food corporations know that, for their customers, the color must be "right." The University of California Davis scorecard for wine quality designates four points out of 20, or 20% of the total score, for color and appearance (1). Food scientists who establish quality control specifications for their product are very aware of the importance of color and appearance. While subjective visual assessment and use of visual color standards are still used in the food industry, instrumental color measurements are extensively employed. Objective measurement of color is desirable for both research and industrial applications, and the ruggedness, stability, and ease of use of today's color measurement instruments have resulted in their widespread adoption.

  17. Processing of Color Words Activates Color Representations

    Science.gov (United States)

    Richter, Tobias; Zwaan, Rolf A.

    2009-01-01

    Two experiments were conducted to investigate whether color representations are routinely activated when color words are processed. Congruency effects of colors and color words were observed in both directions. Lexical decisions on color words were faster when preceding colors matched the color named by the word. Color-discrimination responses…

  18. Antifungal susceptibility profile of cryptic species of Aspergillus.

    Science.gov (United States)

    Alastruey-Izquierdo, Ana; Alcazar-Fuoli, Laura; Cuenca-Estrella, Manuel

    2014-12-01

    The use of molecular tools has led to the description of new cryptic species among different Aspergillus species complexes. Their frequency in the clinical setting has been reported to be between 10 and 15%. The susceptibility to azoles and amphotericin B of many of these species is low, and some of them, such as Aspergillus calidoustus or Aspergillus lentulus, are considered multi-resistant. The changing epidemiology, the frequency of cryptic species, and the different susceptibility profiles make antifungal susceptibility testing an important tool to identify the optimal antifungal agent to treat the infections caused by these species.

  19. Colored operads

    CERN Document Server

    Yau, Donald

    2016-01-01

    The subject of this book is the theory of operads and colored operads, sometimes called symmetric multicategories. A (colored) operad is an abstract object which encodes operations with multiple inputs and one output and relations between such operations. The theory originated in the early 1970s in homotopy theory and quickly became very important in algebraic topology, algebra, algebraic geometry, and even theoretical physics (string theory). Topics covered include basic graph theory, basic category theory, colored operads, and algebras over colored operads. Free colored operads are discussed in complete detail and in full generality. The intended audience of this book includes students and researchers in mathematics and other sciences where operads and colored operads are used. The prerequisite for this book is minimal. Every major concept is thoroughly motivated. There are many graphical illustrations and about 150 exercises. This book can be used in a graduate course and for independent study.

  20. COLOR IMAGES

    Directory of Open Access Journals (Sweden)

    Dominique Lafon

    2011-05-01

    Full Text Available The goal of this article is to present specific capabilities and limitations of the use of color digital images in a characterization process. The whole process is investigated, from the acquisition of digital color images to the analysis of the information relevant to various applications in the field of material characterization. A digital color image can be considered as a matrix of pixels with values expressed in a vector-space (commonly 3 dimensional space whose specificity, compared to grey-scale images, is to ensure a coding and a representation of the output image (visualisation printing that fits the human visual reality. In a characterization process, it is interesting to regard color image attnbutes as a set of visual aspect measurements on a material surface. Color measurement systems (spectrocolorimeters, colorimeters and radiometers and cameras use the same type of light detectors: most of them use Charge Coupled Devices sensors. The difference between the two types of color data acquisition systems is that color measurement systems provide a global information of the observed surface (average aspect of the surface: the color texture is not taken into account. Thus, it seems interesting to use imaging systems as measuring instruments for the quantitative characterization of the color texture.

  1. First record of an aberrantly colored Pin-tailed Sandgrouse (Pterocles alchata)

    OpenAIRE

    Benítez-López, Ana; García-Egea, Iván

    2015-01-01

    The distribution and frequency of color aberrations in wild birds is relatively poorly known. Here we report, for the first time, the observation of an aberrantly colored Pin-tailed Sandgrouse (Pterocles alchata), a threatened steppe bird with cryptic plumage and behavior. The bird displayed a continuous white patch on its back that was not bilaterally symmetrical (i.e., not far from the neural crest), thus discarding leucism as an explanation. Plausible explanations are progressive graying a...

  2. Identification of a group of cryptic marine limpet species, Cellana karachiensis (Mollusca: Patellogastropoda) off Veraval coast, India, using mtDNA COI sequencing.

    Science.gov (United States)

    Joseph, Sneha; Poriya, Paresh; Vakani, Bhavik; Singh, S P; Kundu, Rahul

    2016-01-01

    Present communication reports the phylogenetic relationship between three groups of a marine limpet having different color banding patterns using COI sequencing. Samples were sequenced for mtDNA COI gene using universal primer. Comparative BLAST revealed that all three types were around 99.59% identical with Cellana karachiensis, first record of this species from Indian coasts. Apart from the morphological variations, the mtDNA COI gene analysis revealed around 1% nucleotide variations between these three types. The observed dissimilarity in COI sequences was possibly too little to consider these types as three different species. The derivation of amino acid positions indicated that these types could possibly be a complex of three cryptic species of C. karachiensis. The study proposes that the Oman and Indian populations of C. karachiensis might have derived by allopatric speciation due to geographical isolation. The group of these three cryptic species, sharing same habitat between themselves, possibly showed sympatric speciation.

  3. Novel Functions and Regulation of Cryptic Cellobiose Operons in Escherichia coli.

    Directory of Open Access Journals (Sweden)

    Vinuselvi Parisutham

    Full Text Available Presence of cellobiose as a sole carbon source induces mutations in the chb and asc operons of Escherichia coli and allows it to grow on cellobiose. We previously engineered these two operons with synthetic constitutive promoters and achieved efficient cellobiose metabolism through adaptive evolution. In this study, we characterized two mutations observed in the efficient cellobiose metabolizing strain: duplication of RBS of ascB gene, (β-glucosidase of asc operon and nonsense mutation in yebK, (an uncharacterized transcription factor. Mutations in yebK play a dominant role by modulating the length of lag phase, relative to the growth rate of the strain when transferred from a rich medium to minimal cellobiose medium. Mutations in ascB, on the other hand, are specific for cellobiose and help in enhancing the specific growth rate. Taken together, our results show that ascB of the asc operon is controlled by an internal putative promoter in addition to the native cryptic promoter, and the transcription factor yebK helps to remodel the host physiology for cellobiose metabolism. While previous studies characterized the stress-induced mutations that allowed growth on cellobiose, here, we characterize the adaptation-induced mutations that help in enhancing cellobiose metabolic ability. This study will shed new light on the regulatory changes and factors that are needed for the functional coupling of the host physiology to the activated cryptic cellobiose metabolism.

  4. Contrasting biological features in morphologically cryptic Mediterranean sponges

    Directory of Open Access Journals (Sweden)

    Leire Garate

    2017-06-01

    Full Text Available Sponges are key organisms in the marine benthos where they play essential roles in ecological processes such as creating new niches, competition for resources, and organic matter recycling. Despite the increasing number of taxonomical studies, many sponge species remain hidden, whether unnoticed or cryptic. The occurrence of cryptic species may confound ecological studies by underestimating biodiversity. In this study, we monitored photographically growth, fusions, fissions, and survival of two morphologically cryptic species Hemimycale mediterranea Uriz, Garate & Agell, 2017 and H. columella (Bowerbank, 1874. Additionally, we characterized the main environmental factors of the corresponding species habitats, trying to ascertain whether some abiotic factors were correlated with the distribution of these species. Sponge monitoring was performed monthly. Seawater samples were collected the same monitoring days in the vicinity of the target sponges. Results showed contrasting growth and survival patterns for each species: H. mediterranea totally disappeared after larval release while 64% of individuals of H. columella survived the entire two years we monitored. The species also differed in the number of fissions and fusions. These events were evenly distributed throughout the year in the H. mediterranea population but concentrated in cold months in H. columella. No measured environmental factor correlated with H. mediterranea growth rates, while temperature and dissolved organic nitrogen were negatively correlated with H. columella growth rates. The strong differences in depth distribution, survival, growth, fusions, and fissions found between these two cryptic species, highlights the importance of untangling cryptic species before ecological studies are performed in particular when these species share geographical distribution.

  5. Why Do Cryptic Species Tend Not to Co-Occur? A Case Study on Two Cryptic Pairs of Butterflies

    Science.gov (United States)

    Vodă, Raluca; Dapporto, Leonardo; Dincă, Vlad; Vila, Roger

    2015-01-01

    As cryptic diversity is being discovered, mostly thanks to advances in molecular techniques, it is becoming evident that many of these taxa display parapatric distributions in mainland and that they rarely coexist on islands. Genetic landscapes, haplotype networks and ecological niche modeling analyses were performed for two pairs of non-sister cryptic butterfly species, Aricia agestis-A. cramera and Polyommatus icarus—P. celina (Lycaenidae), to specifically assess non-coexistence on western Mediterranean islands, and to test potential causes producing such chequered distribution patterns. We show that the morphologically and ecologically equivalent pairs of species do not coexist on any of the studied islands, although nearly all islands are colonized by one of them. According to our models, the cryptic pairs displayed marked climatic preferences and ‘precipitation during the driest quarter’ was recovered as the most important climatic determinant. However, neither dispersal capacity, nor climatic or ecological factors fully explain the observed distributions across particular sea straits, and the existence of species interactions resulting in mutual exclusion is suggested as a necessary hypothesis. Given that the studied species are habitat generalists, feeding on virtually unlimited resources, we propose that reproductive interference, together with climatic preferences, sustain density-dependent mechanisms like “founder takes all” and impede coexistence on islands. Chequered distributions among cryptic taxa, both sister and non-sister, are common in butterflies, suggesting that the phenomenon revealed here could be important in determining biodiversity patterns. PMID:25692577

  6. Why do cryptic species tend not to co-occur? A case study on two cryptic pairs of butterflies.

    Directory of Open Access Journals (Sweden)

    Raluca Vodă

    Full Text Available As cryptic diversity is being discovered, mostly thanks to advances in molecular techniques, it is becoming evident that many of these taxa display parapatric distributions in mainland and that they rarely coexist on islands. Genetic landscapes, haplotype networks and ecological niche modeling analyses were performed for two pairs of non-sister cryptic butterfly species, Aricia agestis-A. cramera and Polyommatus icarus-P. celina (Lycaenidae, to specifically assess non-coexistence on western Mediterranean islands, and to test potential causes producing such chequered distribution patterns. We show that the morphologically and ecologically equivalent pairs of species do not coexist on any of the studied islands, although nearly all islands are colonized by one of them. According to our models, the cryptic pairs displayed marked climatic preferences and 'precipitation during the driest quarter' was recovered as the most important climatic determinant. However, neither dispersal capacity, nor climatic or ecological factors fully explain the observed distributions across particular sea straits, and the existence of species interactions resulting in mutual exclusion is suggested as a necessary hypothesis. Given that the studied species are habitat generalists, feeding on virtually unlimited resources, we propose that reproductive interference, together with climatic preferences, sustain density-dependent mechanisms like "founder takes all" and impede coexistence on islands. Chequered distributions among cryptic taxa, both sister and non-sister, are common in butterflies, suggesting that the phenomenon revealed here could be important in determining biodiversity patterns.

  7. Why do cryptic species tend not to co-occur? A case study on two cryptic pairs of butterflies.

    Science.gov (United States)

    Vodă, Raluca; Dapporto, Leonardo; Dincă, Vlad; Vila, Roger

    2015-01-01

    As cryptic diversity is being discovered, mostly thanks to advances in molecular techniques, it is becoming evident that many of these taxa display parapatric distributions in mainland and that they rarely coexist on islands. Genetic landscapes, haplotype networks and ecological niche modeling analyses were performed for two pairs of non-sister cryptic butterfly species, Aricia agestis-A. cramera and Polyommatus icarus-P. celina (Lycaenidae), to specifically assess non-coexistence on western Mediterranean islands, and to test potential causes producing such chequered distribution patterns. We show that the morphologically and ecologically equivalent pairs of species do not coexist on any of the studied islands, although nearly all islands are colonized by one of them. According to our models, the cryptic pairs displayed marked climatic preferences and 'precipitation during the driest quarter' was recovered as the most important climatic determinant. However, neither dispersal capacity, nor climatic or ecological factors fully explain the observed distributions across particular sea straits, and the existence of species interactions resulting in mutual exclusion is suggested as a necessary hypothesis. Given that the studied species are habitat generalists, feeding on virtually unlimited resources, we propose that reproductive interference, together with climatic preferences, sustain density-dependent mechanisms like "founder takes all" and impede coexistence on islands. Chequered distributions among cryptic taxa, both sister and non-sister, are common in butterflies, suggesting that the phenomenon revealed here could be important in determining biodiversity patterns.

  8. Color 3D Reverse Engineering

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    This paper presents a principle and a method of col or 3D laser scanning measurement. Based on the fundamental monochrome 3D measureme nt study, color information capture, color texture mapping, coordinate computati on and other techniques are performed to achieve color 3D measurement. The syste m is designed and composed of a line laser light emitter, one color CCD camera, a motor-driven rotary filter, a circuit card and a computer. Two steps in captu ring object's images in the measurement process: Firs...

  9. Colors and Some Morphological Traits as Defensive Mechanisms in Anurans

    Directory of Open Access Journals (Sweden)

    Luís Felipe Toledo

    2009-01-01

    Full Text Available Anurans may be brightly colored or completely cryptic. Generally, in the former situation, we are dealing with aposematism, and the latter is an example of camouflage. However, these are only simple views of what such colorations really mean and which defensive strategy is implied. For instance, a brightly colored frog may be part of a mimicry ring, which could be either Batesian, Müllerian, or Browerian. These are only examples of the diversity of color-usage systems as defensive strategies. Unfortunately, reports on the use of colors as defensive mechanisms are widespread in the available literature, and the possible functions are rarely mentioned. Therefore, we reviewed the literature and added new data to this subject. Then, we the use of colors (as defensive mechanism into categories. Mimicry was divided into the subcategories camouflage, homotypy, and nondeceitful homotypy, and these groups were also subcategorized. Dissuasive coloration was divided into behavioral display of colors, polymorphism, and polyphenism. Aposematism was treated apart, but aposematic colorations may be present in other defensive strategies. Finally, we propose functions and forms of evolution for some color systems in post-metamorphic anurans and hope that this review can be the basis for future research, even on other animal groups.

  10. Color Laser Microscope

    Science.gov (United States)

    Awamura, D.; Ode, T.; Yonezawa, M.

    1987-04-01

    A color laser microscope utilizing a new color laser imaging system has been developed for the visual inspection of semiconductors. The light source, produced by three lasers (Red; He-Ne, Green; Ar, Blue; He-Cd), is deflected horizontally by an AOD (Acoustic Optical Deflector) and vertically by a vibration mirror. The laser beam is focused in a small spot which is scanned over the sample at high speed. The light reflected back from the sample is reformed to contain linear information by returning to the original vibration mirror. The linear light is guided to the CCD image sensor where it is converted into a video signal. Individual CCD image sensors are used for each of the three R, G, or B color image signals. The confocal optical system with its laser light source yields a color TV monitor image with no flaring and a much sharper resolution than that of the conventional optical microscope. The AOD makes possible a high speed laser scan and a NTSC or PAL TV video signal is produced in real time without any video memory. Since the light source is composed of R, G, and B laser beams, color separation superior to that of white light illumination is achieved. Because of the photometric linearity of the image detector, the R, G, and B outputs of the system are most suitably used for hue analysis. The CCD linear image sensors in the optical system produce no geometrical distortion, and good color registration is available principally. The output signal can be used for high accuracy line width measuring. The many features of the color laser microscope make it ideally suited for the visual inspection of semiconductor processing. A number of these systems have already been installed in such a capacity. The Color Laser Microscope can also be a very useful tool for the fields of material engineering and biotechnology.

  11. Color constancy

    National Research Council Canada - National Science Library

    Foster, David H

    2011-01-01

    ... despite changes in the spectrum of the illumination. At about the same time, new models of color constancy appeared, along with physiological data on cortical mechanisms and photographic colorimetric measurements of natural scenes...

  12. Color tejido

    OpenAIRE

    Rius Tormo, Palmira

    2010-01-01

    Póster presentado en el IX Congreso Nacional del Color, Alicante, 29-30 junio, 1-2 julio 2010. La exposición que se propone tiene como núcleo principal el color y muestra las posibilidades expresivas que aporta a los diferentes materiales. Las 7 obras presentadas buscan la armonía estética y la fuerza simbólica.

  13. Color vision.

    Science.gov (United States)

    Gegenfurtner, Karl R; Kiper, Daniel C

    2003-01-01

    Color vision starts with the absorption of light in the retinal cone photoreceptors, which transduce electromagnetic energy into electrical voltages. These voltages are transformed into action potentials by a complicated network of cells in the retina. The information is sent to the visual cortex via the lateral geniculate nucleus (LGN) in three separate color-opponent channels that have been characterized psychophysically, physiologically, and computationally. The properties of cells in the retina and LGN account for a surprisingly large body of psychophysical literature. This suggests that several fundamental computations involved in color perception occur at early levels of processing. In the cortex, information from the three retino-geniculate channels is combined to enable perception of a large variety of different hues. Furthermore, recent evidence suggests that color analysis and coding cannot be separated from the analysis and coding of other visual attributes such as form and motion. Though there are some brain areas that are more sensitive to color than others, color vision emerges through the combined activity of neurons in many different areas.

  14. Transposable elements in disease-associated cryptic exons.

    Science.gov (United States)

    Vorechovsky, Igor

    2010-02-01

    Transposable elements (TEs) make up a half of the human genome, but the extent of their contribution to cryptic exon activation that results in genetic disease is unknown. Here, a comprehensive survey of 78 mutation-induced cryptic exons previously identified in 51 disease genes revealed the presence of TEs in 40 cases (51%). Most TE-containing exons were derived from short interspersed nuclear elements (SINEs), with Alus and mammalian interspersed repeats (MIRs) covering >18 and >16% of the exonized sequences, respectively. The majority of SINE-derived cryptic exons had splice sites at the same positions of the Alu/MIR consensus as existing SINE exons and their inclusion in the mRNA was facilitated by phylogenetically conserved changes that improved both traditional and auxiliary splicing signals, thus marking intronic TEs amenable for pathogenic exonization. The overrepresentation of MIRs among TE exons is likely to result from their high average exon inclusion levels, which reflect their strong splice sites, a lack of splicing silencers and a high density of enhancers, particularly (G)AA(G) motifs. These elements were markedly depleted in antisense Alu exons, had the most prominent position on the exon-intron gradient scale and are proposed to promote exon definition through enhanced tertiary RNA interactions involving unpaired (di)adenosines. The identification of common mechanisms by which the most dynamic parts of the genome contribute both to new exon creation and genetic disease will facilitate detection of intronic mutations and the development of computational tools that predict TE hot-spots of cryptic exon activation.

  15. Color vision test

    Science.gov (United States)

    ... present from birth) color vision problems: Achromatopsia -- complete color blindness , seeing only shades of gray Deuteranopia -- difficulty telling ... Vision test - color; Ishihara color vision test Images Color blindness tests References Bowling B. Hereditary fundus dystrophies. In: ...

  16. Modeling human color categorization: Color discrimination and color memory

    NARCIS (Netherlands)

    Heskes, T.; van den Broek, Egon; Lucas, P.; Hendriks, Maria A.; Vuurpijl, L.G.; Puts, M.J.H.; Wiegerinck, W.

    2003-01-01

    Color matching in Content-Based Image Retrieval is done using a color space and measuring distances between colors. Such an approach yields non-intuitive results for the user. We introduce color categories (or focal colors), determine that they are valid, and use them in two experiments. The experim

  17. Modeling human color categorization: Color discrimination and color memory

    NARCIS (Netherlands)

    Heskes, T.; van den Broek, Egon; Lucas, P.; Hendriks, Maria A.; Vuurpijl, L.G.; Puts, M.J.H.; Wiegerinck, W.

    2003-01-01

    Color matching in Content-Based Image Retrieval is done using a color space and measuring distances between colors. Such an approach yields non-intuitive results for the user. We introduce color categories (or focal colors), determine that they are valid, and use them in two experiments. The

  18. Sperm storage mediated by cryptic female choice for nuptial gifts.

    Science.gov (United States)

    Albo, Maria J; Bilde, Trine; Uhl, Gabriele

    2013-12-07

    Polyandrous females are expected to discriminate among males through postcopulatory cryptic mate choice. Yet, there is surprisingly little unequivocal evidence for female-mediated cryptic sperm choice. In species in which nuptial gifts facilitate mating, females may gain indirect benefits through preferential storage of sperm from gift-giving males if the gift signals male quality. We tested this hypothesis in the spider Pisaura mirabilis by quantifying the number of sperm stored in response to copulation with males with or without a nuptial gift, while experimentally controlling copulation duration. We further assessed the effect of gift presence and copulation duration on egg-hatching success in matings with uninterrupted copulations with gift-giving males. We show that females mated to gift-giving males stored more sperm and experienced 17% higher egg-hatching success, compared with those mated to no-gift males, despite matched copulation durations. Uninterrupted copulations resulted in both increased sperm storage and egg-hatching success. Our study confirms the prediction that the nuptial gift as a male signal is under positive sexual selection by females through cryptic sperm storage. In addition, the gift facilitates longer copulations and increased sperm transfer providing two different types of advantage to gift-giving in males.

  19. Cryptic individual scaling relationships and the evolution of morphological scaling.

    Science.gov (United States)

    Dreyer, Austin P; Saleh Ziabari, Omid; Swanson, Eli M; Chawla, Akshita; Frankino, W Anthony; Shingleton, Alexander W

    2016-08-01

    Morphological scaling relationships between organ and body size-also known as allometries-describe the shape of a species, and the evolution of such scaling relationships is central to the generation of morphological diversity. Despite extensive modeling and empirical tests, however, the modes of selection that generate changes in scaling remain largely unknown. Here, we mathematically model the evolution of the group-level scaling as an emergent property of individual-level variation in the developmental mechanisms that regulate trait and body size. We show that these mechanisms generate a "cryptic individual scaling relationship" unique to each genotype in a population, which determines body and trait size expressed by each individual, depending on developmental nutrition. We find that populations may have identical population-level allometries but very different underlying patterns of cryptic individual scaling relationships. Consequently, two populations with apparently the same morphological scaling relationship may respond very differently to the same form of selection. By focusing on the developmental mechanisms that regulate trait size and the patterns of cryptic individual scaling relationships they produce, our approach reveals the forms of selection that should be most effective in altering morphological scaling, and directs researcher attention on the actual, hitherto overlooked, targets of selection.

  20. Color superconductivity

    Energy Technology Data Exchange (ETDEWEB)

    Wilczek, F. [Institute for Advanced Study, Princeton, NJ (United States)

    1997-09-22

    The asymptotic freedom of QCD suggests that at high density - where one forms a Fermi surface at very high momenta - weak coupling methods apply. These methods suggest that chiral symmetry is restored and that an instability toward color triplet condensation (color superconductivity) sets in. Here I attempt, using variational methods, to estimate these effects more precisely. Highlights include demonstration of a negative pressure in the uniform density chiral broken phase for any non-zero condensation, which we take as evidence for the philosophy of the MIT bag model; and demonstration that the color gap is substantial - several tens of MeV - even at modest densities. Since the superconductivity is in a pseudoscalar channel, parity is spontaneously broken.

  1. Color Calibration for Colorized Vision System with Digital Sensor and LED Array Illuminator

    Directory of Open Access Journals (Sweden)

    Zhenmin Zhu

    2016-01-01

    Full Text Available Color measurement by the colorized vision system is a superior method to achieve the evaluation of color objectively and continuously. However, the accuracy of color measurement is influenced by the spectral responses of digital sensor and the spectral mismatch of illumination. In this paper, two-color vision system illuminated by digital sensor and LED array, respectively, is presented. The Polynomial-Based Regression method is applied to solve the problem of color calibration in the sRGB and CIE  L⁎a⁎b⁎ color spaces. By mapping the tristimulus values from RGB to sRGB color space, color difference between the estimated values and the reference values is less than 3ΔE. Additionally, the mapping matrix ΦRGB→sRGB has proved a better performance in reducing the color difference, and it is introduced subsequently into the colorized vision system proposed for a better color measurement. Necessarily, the printed matter of clothes and the colored ceramic tile are chosen as the application experiment samples of our colorized vision system. As shown in the experimental data, the average color difference of images is less than 6ΔE. It indicates that a better performance of color measurement is obtained via the colorized vision system proposed.

  2. Colored Preons

    CERN Document Server

    Finkelstein, Robert J

    2009-01-01

    Previous studies have suggested complementary models of the elementary particles as (a) quantum knots and (b) preonic nuclei that are field and particle descriptions, respectively, of the same particles. This earlier work, carried out in the context of standard electroweak (SU(2) x U(1)) physics, is here extended to the strong interactions by the introduction of color (SU(3)) charges.

  3. Color Sense

    Science.gov (United States)

    Johnson, Heidi S. S.; Maki, Jennifer A.

    2009-01-01

    This article reports a study conducted by members of the WellU Academic Integration Subcommittee of The College of St. Scholastica's College's Healthy Campus Initiative plan whose purpose was to determine whether changing color in the classroom could have a measurable effect on students. One simple improvement a school can make in a classroom is…

  4. Impartial coloring games

    CERN Document Server

    Beaulieu, Gabriel; Duchêne, Eric

    2012-01-01

    Coloring games are combinatorial games where the players alternate painting uncolored vertices of a graph one of $k > 0$ colors. Each different ruleset specifies that game's coloring constraints. This paper investigates six impartial rulesets (five new), derived from previously-studied graph coloring schemes, including proper map coloring, oriented coloring, 2-distance coloring, weak coloring, and sequential coloring. For each, we study the outcome classes for special cases and general computational complexity. In some cases we pay special attention to the Grundy function.

  5. Rapid color evolution in an aposematic species: a phylogenetic analysis of color variation in the strikingly polymorphic strawberry poison-dart frog.

    Science.gov (United States)

    Wang, Ian J; Shaffer, H Bradley

    2008-11-01

    Aposematism is one of the great mysteries of evolutionary biology. The evolution of aposematic coloration is poorly understood, but even less understood is the evolution of polymorphism in aposematic signals. Here, we use a phylogeographic approach to investigate the evolution of color polymorphism in Dendrobates pumilio, a well-known poison-dart frog (family Dendrobatidae), which displays perhaps the most striking color variation of any aposematic species. With over a dozen color morphs, ranging from bright red to dull green, D. pumilio provides an ideal opportunity to examine the evolution of color polymorphism and evolutionary shifts to cryptic coloration in an otherwise aposematic species. We constructed a phylogenetic tree for all D. pumilio color morphs from 3051bp of mtDNA sequence data, reconstructed ancestral states using parsimony and Bayesian methods, and tested the recovered tree against constraint trees using parametric bootstrapping to determine the number of changes to each color type. We find strong evidence for nearly maximal numbers of changes in all color traits, including five independent shifts to dull dorsal coloration. Our results indicate that shifts in coloration in aposematic species may occur more regularly than predicted and that convergence in coloration may indicate that similar forces are repeatedly driving these shifts.

  6. Hormonal regulation of colour change in eyes of a cryptic fish

    Directory of Open Access Journals (Sweden)

    Helen Nilsson Sköld

    2015-01-01

    Full Text Available Colour change of the skin in lower vertebrates such as fish has been a subject of great scientific and public interest. However, colour change also takes place in eyes of fish and while an increasing amount of data indicates its importance in behaviour, very little is known about its regulation. Here, we report that both eye and skin coloration change in response to white to black background adaptation in live sand goby Pomatoschistus minutes, a bentic marine fish. Through in vitro experiments, we show that noradrenaline and melanocyte concentrating hormone (MCH treatments cause aggregation of pigment organelles in the eye chromatophores. Daylight had no aggregating effect. Combining forskolin to elevate intracellular cyclic adenosine monophosphate (cAMP with MCH resulted in complete pigment dispersal and darkening of the eyes, whereas combining prolactin, adrenocorticotrophic hormone (ACTH or melanocyte stimulating hormone (α-MSH with MCH resulted in more yellow and red eyes. ACTH and MSH also induced dispersal in the melanophores, resulting in overall darker eyes. By comparing analysis of eyes, skin and peritoneum, we conclude that the regulation pattern is similar between these different tissues in this species which is relevant for the cryptic life strategy of this species. With the exception of ACTH which resulted in most prominent melanophore pigment dispersal in the eyes, all other treatments provided similar results between tissue types. To our knowledge, this is the first study that has directly analysed hormonal regulation of physiological colour change in eyes of fish.

  7. A Color-Opponency Based Biological Model for Color Constancy

    Directory of Open Access Journals (Sweden)

    Yongjie Li

    2011-05-01

    Full Text Available Color constancy is the ability of the human visual system to adaptively correct color-biased scenes under different illuminants. Most of the existing color constancy models are nonphysiologically plausible. Among the limited biological models, the great majority is Retinex and its variations, and only two or three models directly simulate the feature of color-opponency, but only of the very earliest stages of visual pathway, i.e., the single-opponent mechanisms involved at the levels of retinal ganglion cells and lateral geniculate nucleus (LGN neurons. Considering the extensive physiological evidences supporting that both the single-opponent cells in retina and LGN and the double-opponent neurons in primary visual cortex (V1 are the building blocks for color constancy, in this study we construct a color-opponency based color constancy model by simulating the opponent fashions of both the single-opponent and double-opponent cells in a forward manner. As for the spatial structure of the receptive fields (RF, both the classical RF (CRF center and the nonclassical RF (nCRF surround are taken into account for all the cells. The proposed model was tested on several typical image databases commonly used for performance evaluation of color constancy methods, and exciting results were achieved.

  8. Predation in Ground-Nesting Birds: an Experimental Study Using Natural Egg-Color Variation

    Directory of Open Access Journals (Sweden)

    Aurora M. Castilla

    2007-06-01

    Full Text Available We tested the hypothesis that cryptically colored eggs would suffer less predation than conspicuous eggs in the ground-nesting red-legged partridge, Alectoris rufa. We used A. rufa as a model species because it has a wide range of natural egg colors, the eggs are widely available from breeding farms, and nests are easily mimicked because they are scrapes containing no vegetation. The study was conducted in the spring of 2001 in forest and fallow fields of central Spain in Castilla La Mancha, Ciudad Real. We used 384 clutches of natural eggs that were white, white spotted, brown, or brown spotted. Within clutches, eggs were consistent in color and size; among clutches, color differences were distributed across habitats. Clutches were checked once after 2 wk of exposure. Cryptic coloration had a survival advantage that was dependent on the local suite of predators. Rodent predation was nonselective with respect to clutch color; however, avian predation was significantly higher for conspicuous clutches. In addition, there was an interaction of landscape and egg color for avian predation. In forest landscapes, the clutches with highest survival were brown spotted, whereas in fallow landscapes, brown and brown spotted clutches had higher survival than white and white potted clutches. Thus, both the predator suite and the landscape had significant effects on the value of cryptic egg coloration. Our study is relevant for conservationists and managers in charge of restocking programs in hunting areas. The release of other partridge species or their hybrids could result in hybridization with wild partridges, potentially leading to nonoptimal clutch pigmentation and reduced survival of the native species. We therefore recommend that local authorities, managers, and conservationists be cautious with the use of alien species and hybrids and release only autochthonous species of partridges within their natural ranges.

  9. High frequency of T cells specific for cryptic epitopes in melanoma patients

    DEFF Research Database (Denmark)

    Andersen, Rikke Sick; Andersen, Sofie Ramskov; Hjortsø, Mads Duus

    2013-01-01

    A number of cytotoxic T-cell epitopes are cryptic epitopes generated from non-conventional sources. These include epitopes that are encoded by alternative open reading frames or in generally non-coding genomic regions, such as introns. We have previously observed a frequent recognition of cryptic...

  10. Complete sequence of a cryptic virus from hemp (Cannabis sativa).

    Science.gov (United States)

    Ziegler, Angelika; Matoušek, Jaroslav; Steger, Gerhard; Schubert, Jörg

    2012-02-01

    Hemp (Cannabis sativa) was found to be a useful propagation host for hop latent virus, a carlavirus. However, when virus preparations were analysed by electron microscopy, along with the expected filamentous particles, spherical particles with a diameter of around 34 nm were found. RNA from virus preparations was purified, and cDNA was prepared and cloned. Sequence information was used to search databases, and the greatest similarity was found with Primula malacoides virus 1, a putative new member of the genus Partitivirus. The full sequences of RNA 1 and RNA 2 of this new hemp cryptic virus were obtained.

  11. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... One Use Facts About Colored Contacts and Halloween Safety Colored Contact Lens Facts Over-the-Counter Costume ... use of colored contact lenses , from the U.S. Food and Drug Administration (FDA). Are the colored lenses ...

  12. Computational color technology

    CERN Document Server

    Kang, Henry R

    2006-01-01

    Henry Kang provides the fundamental color principles and mathematical tools to prepare the reader for a new era of color reproduction, and for subsequent applications in multispectral imaging, medical imaging, remote sensing, and machine vision. This book is intended to bridge the gap between color science and computational color technology, putting color adaptation, color constancy, color transforms, color display, and color rendition in the domain of vector-matrix representations and theories. Computational Color Technology deals with color digital images on the spectral level using vector-m

  13. Colored Traveling Salesman Problem.

    Science.gov (United States)

    Li, Jun; Zhou, MengChu; Sun, Qirui; Dai, Xianzhong; Yu, Xiaolong

    2015-11-01

    The multiple traveling salesman problem (MTSP) is an important combinatorial optimization problem. It has been widely and successfully applied to the practical cases in which multiple traveling individuals (salesmen) share the common workspace (city set). However, it cannot represent some application problems where multiple traveling individuals not only have their own exclusive tasks but also share a group of tasks with each other. This work proposes a new MTSP called colored traveling salesman problem (CTSP) for handling such cases. Two types of city groups are defined, i.e., each group of exclusive cities of a single color for a salesman to visit and a group of shared cities of multiple colors allowing all salesmen to visit. Evidences show that CTSP is NP-hard and a multidepot MTSP and multiple single traveling salesman problems are its special cases. We present a genetic algorithm (GA) with dual-chromosome coding for CTSP and analyze the corresponding solution space. Then, GA is improved by incorporating greedy, hill-climbing (HC), and simulated annealing (SA) operations to achieve better performance. By experiments, the limitation of the exact solution method is revealed and the performance of the presented GAs is compared. The results suggest that SAGA can achieve the best quality of solutions and HCGA should be the choice making good tradeoff between the solution quality and computing time.

  14. Nonlinear color-image decomposition for image processing of a digital color camera

    Science.gov (United States)

    Saito, Takahiro; Aizawa, Haruya; Yamada, Daisuke; Komatsu, Takashi

    2009-01-01

    This paper extends the BV (Bounded Variation) - G and/or the BV-L1 variational nonlinear image-decomposition approaches, which are considered to be useful for image processing of a digital color camera, to genuine color-image decomposition approaches. For utilizing inter-channel color cross-correlations, this paper first introduces TV (Total Variation) norms of color differences and TV norms of color sums into the BV-G and/or BV-L1 energy functionals, and then derives denoising-type decomposition-algorithms with an over-complete wavelet transform, through applying the Besov-norm approximation to the variational problems. Our methods decompose a noisy color image without producing undesirable low-frequency colored artifacts in its separated BV-component, and they achieve desirable high-quality color-image decomposition, which is very robust against colored random noise.

  15. Development of an XYZ Digital Camera with Embedded Color Calibration System for Accurate Color Acquisition

    Science.gov (United States)

    Kretkowski, Maciej; Jablonski, Ryszard; Shimodaira, Yoshifumi

    Acquisition of accurate colors is important in the modern era of widespread exchange of electronic multimedia. The variety of device-dependent color spaces causes troubles with accurate color reproduction. In this paper we present the outlines of accomplished digital camera system with device-independent output formed from tristimulus XYZ values. The outstanding accuracy and fidelity of acquired color is achieved in our system by employing an embedded color calibration system based on emissive device generating reference calibration colors with user-defined spectral distribution and chromaticity coordinates. The system was tested by calibrating the camera using 24 reference colors spectrally reproduced from 24 color patches of the Macbeth Chart. The average color difference (CIEDE2000) has been found to be ΔE =0.83, which is an outstanding result compared to commercially available digital cameras.

  16. Aspergillus niger contains the cryptic phylogenetic species A. awamori.

    Science.gov (United States)

    Perrone, Giancarlo; Stea, Gaetano; Epifani, Filomena; Varga, János; Frisvad, Jens C; Samson, Robert A

    2011-11-01

    Aspergillus section Nigri is an important group of species for food and medical mycology, and biotechnology. The Aspergillus niger 'aggregate' represents its most complicated taxonomic subgroup containing eight morphologically indistinguishable taxa: A. niger, Aspergillus tubingensis, Aspergillus acidus, Aspergillus brasiliensis, Aspergillus costaricaensis, Aspergillus lacticoffeatus, Aspergillus piperis, and Aspergillus vadensis. Aspergillus awamori, first described by Nakazawa, has been compared taxonomically with other black aspergilli and recently it has been treated as a synonym of A. niger. Phylogenetic analyses of sequences generated from portions of three genes coding for the proteins β-tubulin (benA), calmodulin (CaM), and the translation elongation factor-1 alpha (TEF-1α) of a population of A. niger strains isolated from grapes in Europe revealed the presence of a cryptic phylogenetic species within this population, A. awamori. Morphological, physiological, ecological and chemical data overlap occurred between A. niger and the cryptic A. awamori, however the splitting of these two species was also supported by AFLP analysis of the full genome. Isolates in both phylospecies can produce the mycotoxins ochratoxin A and fumonisin B₂, and they also share the production of pyranonigrin A, tensidol B, funalenone, malformins, and naphtho-γ-pyrones. In addition, sequence analysis of four putative A. awamori strains from Japan, used in the koji industrial fermentation, revealed that none of these strains belong to the A. awamori phylospecies.

  17. Allopatric speciation within a cryptic species complex of Australasian octopuses.

    Directory of Open Access Journals (Sweden)

    Michael D Amor

    Full Text Available Despite extensive revisions over recent decades, the taxonomy of benthic octopuses (Family Octopodidae remains in a considerable flux. Among groups of unresolved status is a species complex of morphologically similar shallow-water octopods from subtropical Australasia, including: Allopatric populations of Octopus tetricus on the eastern and western coasts of Australia, of which the Western Australian form is speculated to be a distinct or sub-species; and Octopus gibbsi from New Zealand, a proposed synonym of Australian forms. This study employed a combination of molecular and morphological techniques to resolve the taxonomic status of the 'tetricus complex'. Phylogenetic analyses (based on five mitochondrial genes: 12S rRNA, 16S rRNA, COI, COIII and Cytb and Generalised Mixed Yule Coalescent (GMYC analysis (based on COI, COIII and Cytb distinguished eastern and Western Australian O. tetricus as distinct species, while O. gibbsi was found to be synonymous with the east Australian form (BS = >97, PP = 1; GMYC p = 0.01. Discrete morphological differences in mature male octopuses (based on sixteen morphological traits provided further evidence of cryptic speciation between east (including New Zealand and west coast populations; although females proved less useful in morphological distinction among members of the tetricus complex. In addition, phylogenetic analyses suggested populations of octopuses currently treated under the name Octopus vulgaris are paraphyletic; providing evidence of cryptic speciation among global populations of O. vulgaris, the most commercially valuable octopus species worldwide.

  18. Monitoring cryptic amphibians and reptiles in a Florida state park.

    Science.gov (United States)

    Engeman, Richard M; Meshaka, Walter E; Severson, Robert; Severson, Mary Ann; Kaufman, Greg; Groninger, N Paige; Smith, Henry T

    2016-04-01

    We monitored cryptic herpetofauna at Savannas Preserve State Park, Florida, by combining artificial cover counts with a quantitative paradigm for constructing and calculating population indices. Weekly indices were calculated from two consecutive days of data collection each week for 7 months from mid-winter to mid-summer in three habitats. Seventeen species were observed at least once, and time trends using index values were followed for six species. Among these, abundance and seasonal pattern information were obtained for an exotic species (greenhouse frog) and a species identified by the Florida Committee on Rare and Endangered Plants and Animals as threatened (Florida scrub lizard). We identified winter as the optimal time in this area to monitor populations for conducting annual assessments. This combined observation and indexing approach could provide managers or researchers with an economical means to quantitatively index population trends for multiple cryptic herpetofauna species simultaneously. Using artificial cover to sample within a population indexing design can be generalized beyond monitoring herpetofauna. Other forms of artificial cover that can be used as observation stations include aquatic artificial substrates, artificial tree cavities, artificial reefs, and other artificial aquatic structures and artificial sea grass units, among many others, and a wide range of taxa are suitable for population monitoring using artificial cover as observation stations in the approach we present, including insects, soil invertebrates, micro and macro aquatic invertebrates, fish, crustaceans, and small mammals.

  19. Color calibration of an RGB camera mounted in front of a microscope with strong color distortion.

    Science.gov (United States)

    Charrière, Renée; Hébert, Mathieu; Trémeau, Alain; Destouches, Nathalie

    2013-07-20

    This paper aims at showing that performing color calibration of an RGB camera can be achieved even in the case where the optical system before the camera introduces strong color distortion. In the present case, the optical system is a microscope containing a halogen lamp, with a nonuniform irradiance on the viewed surface. The calibration method proposed in this work is based on an existing method, but it is preceded by a three-step preprocessing of the RGB images aiming at extracting relevant color information from the strongly distorted images, taking especially into account the nonuniform irradiance map and the perturbing texture due to the surface topology of the standard color calibration charts when observed at micrometric scale. The proposed color calibration process consists first in computing the average color of the color-chart patches viewed under the microscope; then computing white balance, gamma correction, and saturation enhancement; and finally applying a third-order polynomial regression color calibration transform. Despite the nonusual conditions for color calibration, fairly good performance is achieved from a 48 patch Lambertian color chart, since an average CIE-94 color difference on the color-chart colors lower than 2.5 units is obtained.

  20. Color blindness and Rorschach color responsivity.

    Science.gov (United States)

    Corsino, B V

    1985-10-01

    Color vision deficits occur in 10% of the American white male population. Thus, color blindness may invalidate diagnostic hypotheses generated from Rorschach data. The Rorschach protocols of 43 white, college male color-blind subjects were compared to the protocols of normally sighted controls. The color-blind group manifested fewer pure "C" responses. No significant between group differences emerged for any of the other primary Rorschach color variables. Pure "C" responses rarely figure prominently in Rorschach evaluations, and the apparent lowered frequency of these responses by the color-blind is insufficient to warrant modification of current Rorschach practice. The data suggest that color blindness is unlikely to confound Rorschach assessment.

  1. Biomimetics, color, and the arts

    Science.gov (United States)

    Schenk, Franziska

    2015-03-01

    Color as dramatic, dynamic and dazzling as the iridescent hues on the wings of certain butterflies has never been encountered in the art world. Unlike and unmatched by the chemical pigments of the artists' palette, this changeable color is created by transparent, colorless nanostructures that, as with prisms, diffract and reflect light to render spectral color visible. Until now, iridescent colors, by their very nature, have defied artists' best efforts to fully capture these rainbow hues. Now, for the first time, the artist and researcher Franziska Schenk employs latest nature-inspired color-shift technology to actually simulate the iridescence of butterflies and beetles on canvas. Crucially, studying the ingenious ways in which a range of such displays are created by insects has provided the artist with vital clues on how to adapt and adopt these challenging optical nano-materials for painting. And indeed, after years of meticulous and painstaking research both in the lab and studio, the desired effect is achieved. The resulting paintings, like an iridescent insect, do in fact fluctuate in perceived color - depending on the light and viewing angle. In tracing the artist's respective biomimetic approach, the paper not only provides an insight into the new color technology's evolution and innovative artistic possibilities, but also suggests what artists can learn from nature.

  2. Spatiochromatic Context Modeling for Color Saliency Analysis.

    Science.gov (United States)

    Zhang, Jun; Wang, Meng; Zhang, Shengping; Li, Xuelong; Wu, Xindong

    2016-06-01

    Visual saliency is one of the most noteworthy perceptual abilities of human vision. Recent progress in cognitive psychology suggests that: 1) visual saliency analysis is mainly completed by the bottom-up mechanism consisting of feedforward low-level processing in primary visual cortex (area V1) and 2) color interacts with spatial cues and is influenced by the neighborhood context, and thus it plays an important role in a visual saliency analysis. From a computational perspective, the most existing saliency modeling approaches exploit multiple independent visual cues, irrespective of their interactions (or are not computed explicitly), and ignore contextual influences induced by neighboring colors. In addition, the use of color is often underestimated in the visual saliency analysis. In this paper, we propose a simple yet effective color saliency model that considers color as the only visual cue and mimics the color processing in V1. Our approach uses region-/boundary-defined color features with spatiochromatic filtering by considering local color-orientation interactions, therefore captures homogeneous color elements, subtle textures within the object and the overall salient object from the color image. To account for color contextual influences, we present a divisive normalization method for chromatic stimuli through the pooling of contrary/complementary color units. We further define a color perceptual metric over the entire scene to produce saliency maps for color regions and color boundaries individually. These maps are finally globally integrated into a one single saliency map. The final saliency map is produced by Gaussian blurring for robustness. We evaluate the proposed method on both synthetic stimuli and several benchmark saliency data sets from the visual saliency analysis to salient object detection. The experimental results demonstrate that the use of color as a unique visual cue achieves competitive results on par with or better than 12 state

  3. Metabolism of cryptic peptides derived from neuropeptide FF precursors: the involvement of insulin-degrading enzyme.

    Science.gov (United States)

    Grasso, Giuseppe; Mielczarek, Przemyslaw; Niedziolka, Magdalena; Silberring, Jerzy

    2014-09-22

    The term "cryptome" refers to the subset of cryptic peptides with bioactivities that are often unpredictable and very different from the parent protein. These cryptic peptides are generated by proteolytic cleavage of proteases, whose identification in vivo can be very challenging. In this work, we show that insulin-degrading enzyme (IDE) is able to degrade specific amino acid sequences present in the neuropeptide pro-NPFFA (NPFF precursor), generating some cryptic peptides that are also observed after incubation with rat brain cortex homogenate. The reported experimental findings support the increasingly accredited hypothesis, according to which, due to its wide substrate selectivity, IDE is involved in a wide variety of physiopathological processes.

  4. The Algorithm to Detect Color Gradation on Silk

    Directory of Open Access Journals (Sweden)

    Suyoto

    2012-03-01

    Full Text Available The process of silk dyeing with natural dye extracts will produce a certain color. Using extracts of wood, leaf and their combinations will give some color gradations. This paper aims to create a new algorithm which can help one, whose intention is to formulate the combination of coloring process to achieve the desired color through combining coloring materials on silk fabric. This algorithm will be expected to be able to formulate the combination of colors with more than 75 percent of accuracy. The natural dyes used were Ceriops candolleana arn wood for the red, Cudraina javanensis wood for the yellow, and indigofera leaf for the blue base color.

  5. Experimental tests for heritable morphological color plasticity in non-native brown trout (Salmo trutta populations.

    Directory of Open Access Journals (Sweden)

    Peter A H Westley

    Full Text Available The success of invasive species is frequently attributed to phenotypic plasticity, which facilitates persistence in novel environments. Here we report on experimental tests to determine whether the intensity of cryptic coloration patterns in a global invader (brown trout, Salmo trutta was primarily the result of plasticity or heritable variation. Juvenile F1 offspring were created through experimental crosses of wild-caught parents and reared for 30 days in the laboratory in a split-brood design on either light or dark-colored gravel substrate. Skin and fin coloration quantified with digital photography and image analysis indicated strong plastic effects in response to substrate color; individuals reared on dark substrate had both darker melanin-based skin color and carotenoid-based fin colors than other members of their population reared on light substrate. Slopes of skin and fin color reaction norms were parallel between environments, which is not consistent with heritable population-level plasticity to substrate color. Similarly, we observed weak differences in population-level color within an environment, again suggesting little genetic control on the intensity of skin and fin colors. Taken as whole, our results are consistent with the hypothesis that phenotypic plasticity may have facilitated the success of brown trout invasions and suggests that plasticity is the most likely explanation for the variation in color intensity observed among these populations in nature.

  6. Modeling human color categorization

    NARCIS (Netherlands)

    van den Broek, Egon; Schouten, Th.E.; Kisters, P.M.F.

    2008-01-01

    A unique color space segmentation method is introduced. It is founded on features of human cognition, where 11 color categories are used in processing color. In two experiments, human subjects were asked to categorize color stimuli into these 11 color categories, which resulted in markers for a Colo

  7. Modeling human color categorization

    NARCIS (Netherlands)

    van den Broek, Egon; Schouten, Th.E.; Kisters, P.M.F.

    A unique color space segmentation method is introduced. It is founded on features of human cognition, where 11 color categories are used in processing color. In two experiments, human subjects were asked to categorize color stimuli into these 11 color categories, which resulted in markers for a

  8. Aspergillus niger contains the cryptic phylogenetic species A. awamori

    DEFF Research Database (Denmark)

    Perrone, Giancarlo; Stea, Gaetano; Epifani, Filomena

    2011-01-01

    Aspergillus section Nigri is an important group of species for food and medical mycology, and biotechnology. The Aspergillus niger ‘aggregate’ represents its most complicated taxonomic subgroup containing eight morphologically indistinguishable taxa: A. niger, Aspergillus tubingensis, Aspergillus...... acidus, Aspergillus brasiliensis, Aspergillus costaricaensis, Aspergillus lacticoffeatus, Aspergillus piperis, and Aspergillus vadensis. Aspergillus awamori, first described by Nakazawa, has been compared taxonomically with other black aspergilli and recently it has been treated as a synonym of A. niger....... Phylogenetic analyses of sequences generated from portions of three genes coding for the proteins β-tubulin (benA), calmodulin (CaM), and the translation elongation factor-1 alpha (TEF-1α) of a population of A. niger strains isolated from grapes in Europe revealed the presence of a cryptic phylogenetic species...

  9. Postmating Female Control: 20 Years of Cryptic Female Choice.

    Science.gov (United States)

    Firman, Renée C; Gasparini, Clelia; Manier, Mollie K; Pizzari, Tommaso

    2017-03-16

    Cryptic female choice (CFC) represents postmating intersexual selection arising from female-driven mechanisms at or after mating that bias sperm use and impact male paternity share. Although biologists began to study CFC relatively late, largely spurred by Eberhard's book published 20 years ago, the field has grown rapidly since then. Here, we review empirical progress to show that numerous female processes offer potential for CFC, from mating through to fertilization, although seldom has CFC been clearly demonstrated. We then evaluate functional implications, and argue that, under some conditions, CFC might have repercussions for female fitness, sexual conflict, and intersexual coevolution, with ramifications for related evolutionary phenomena, such as speciation. We conclude by identifying directions for future research in this rapidly growing field.

  10. Ovarian fluid allows directional cryptic female choice despite external fertilization.

    Science.gov (United States)

    Alonzo, Suzanne H; Stiver, Kelly A; Marsh-Rollo, Susan E

    2016-08-16

    In species with internal fertilization, females can favour certain males over others, not only before mating but also within the female's reproductive tract after mating. Here, we ask whether such directional post-mating (that is, cryptic) female mate choice can also occur in species with external fertilization. Using an in vitro sperm competition experiment, we demonstrate that female ovarian fluid (ovarian fluid) changes the outcome of sperm competition by decreasing the importance of sperm number thereby increasing the relative importance of sperm velocity. We further show that ovarian fluid does not differentially affect sperm from alternative male phenotypes, but generally enhances sperm velocity, motility, straightness and chemoattraction. Under natural conditions, female ovarian fluid likely increases the paternity of the preferred parental male phenotype, as these males release fewer but faster sperm. These results imply females have greater control over fertilization and potential to exert selection on males in species with external fertilization than previously thought possible.

  11. A Novel Information Security Scheme using Cryptic Steganography

    Directory of Open Access Journals (Sweden)

    K RAMA MOHANA RAO

    2010-12-01

    Full Text Available The demand for effective information security schemes is increasing day by day with the exponential growth of Internet. Cryptography and Steganography are the two popular techniques for secret communication. The contents of message are kept secret in cryptography, where as in steganography the message is embedded into the cover image (text, video and image (pay load. In this proposed system we developed a system in which cryptography and steganography are used as integrated part along with newly developed enhanced security model. In cryptography we are using MD-5 Algorithm to encrypt a message and a part of message is hidden in DCT of an image, remaining part of the message is used to generate three ( 3 secret keys which make the system highly secured. To avoid the problem of unauthorized data access steganography along with cryptography called as Cryptic-Steganography scheme is the right most solution.

  12. Mitochondrial DNA data reveal cryptic species within Taenia krabbei.

    Science.gov (United States)

    Lavikainen, Antti; Haukisalmi, Voitto; Lehtinen, Markus J; Laaksonen, Sauli; Holmström, Sauli; Isomursu, Marja; Oksanen, Antti; Meri, Seppo

    2010-06-01

    Cysticerci of Taenia sp. from two elks (Alces alces) in Finland were characterized using morphological criteria and sequences of two mitochondrial DNA regions. The host species, size, structure and location of the cysticerci indicated that they might belong to Taenia krabbei, a circumpolar species occurring in a sylvatic life cycle in wild canids and cervids. Based on the number, length and shape of the rostellar hooks, the specimens could not be unambiguously defined as belonging to T. krabbei, T. cervi, T. ovis or T. solium. In the phylogenetic analysis, based on mitochondrial nucleotide sequence data, Taenia sp. was placed as a sister species of T. solium, distant from T. krabbei isolates previously characterized from Svalbard. This indicates that the Finnish and the Svalbard isolates, resembling T. krabbei, cannot represent a single species. The results suggest that careful morphological and genetic analyses of further isolates from intermediate and definitive hosts are required to define the taxonomic status of these two cryptic species.

  13. Hyper-cryptic marine meiofauna: species complexes in Nemertodermatida.

    Directory of Open Access Journals (Sweden)

    Inga Meyer-Wachsmuth

    Full Text Available Nemertodermatida are microscopically small, benthic marine worms. Specimens of two nominal species, Sterreria psammicola and Nemertinoides elongatus from 33 locations worldwide were sequenced for three molecular markers. Species delimitation and validation was done using gene trees, haplotype networks and multilocus Bayesian analysis. We found 20 supported species of which nine: Nemertinoides glandulosum n.sp., N. wolfgangi n.sp., Sterreria boucheti n.sp., S. lundini n.sp., S. martindalei n.sp., S. monolithes n.sp., S. papuensis n.sp., S. variabilis n.sp. and S. ylvae n.sp., are described including nucleotide-based diagnoses. The distribution patterns indicate transoceanic dispersal in some of the species. Sympatric species were found in many cases. The high level of cryptic diversity in this meiofauna group implies that marine diversity may be higher than previously estimated.

  14. Cryptic photosynthesis, Extrasolar planetary oxygen without a surface biological signature

    CERN Document Server

    Cockell, C S; Raven, J A

    2008-01-01

    On the Earth, photosynthetic organisms are responsible for the production of nearly all of the oxygen in the atmosphere. On the land, vegetation reflects in the visible, leading to a red edge which has been proposed as a biosignature for life on extrasolar planets. However, in many regions of the Earth, and particularly where surface conditions are extreme, for example in hot and cold deserts, photosynthetic organisms can be driven into and under substrates where light is still sufficient for photosynthesis. These communities exhibit no detectable surface spectral signature. The same is true of the assemblages of photosynthetic organisms at more than a few meters depth in water bodies. These communities are widespread and dominate local photosynthetic productivity. We review known cryptic photosynthetic communities and their productivity. We use a radiative transfer model to link geomicrobiology with observational astronomy and calculate the disk-averaged spectra and identify detectable features that would re...

  15. [Research on developping the spectral dataset for Dunhuang typical colors based on color constancy].

    Science.gov (United States)

    Liu, Qiang; Wan, Xiao-Xia; Liu, Zhen; Li, Chan; Liang, Jin-Xing

    2013-11-01

    The present paper aims at developping a method to reasonably set up the typical spectral color dataset for different kinds of Chinese cultural heritage in color rendering process. The world famous wall paintings dating from more than 1700 years ago in Dunhuang Mogao Grottoes was taken as typical case in this research. In order to maintain the color constancy during the color rendering workflow of Dunhuang culture relics, a chromatic adaptation based method for developping the spectral dataset of typical colors for those wall paintings was proposed from the view point of human vision perception ability. Under the help and guidance of researchers in the art-research institution and protection-research institution of Dunhuang Academy and according to the existing research achievement of Dunhuang Research in the past years, 48 typical known Dunhuang pigments were chosen and 240 representative color samples were made with reflective spectral ranging from 360 to 750 nm was acquired by a spectrometer. In order to find the typical colors of the above mentioned color samples, the original dataset was devided into several subgroups by clustering analysis. The grouping number, together with the most typical samples for each subgroup which made up the firstly built typical color dataset, was determined by wilcoxon signed rank test according to the color inconstancy index comprehensively calculated under 6 typical illuminating conditions. Considering the completeness of gamut of Dunhuang wall paintings, 8 complementary colors was determined and finally the typical spectral color dataset was built up which contains 100 representative spectral colors. The analytical calculating results show that the median color inconstancy index of the built dataset in 99% confidence level by wilcoxon signed rank test was 3.28 and the 100 colors are distributing in the whole gamut uniformly, which ensures that this dataset can provide reasonable reference for choosing the color with highest

  16. Cryptic diversity and patterns of host specificity in trematode flatworms.

    Science.gov (United States)

    Hayward, Alexander

    2010-07-01

    The widespread utilization of molecular markers has revealed that a broad spectrum of taxa contain sets of morphologically cryptic, but genetically distinct lineages (Bickford et al. 2007). The identification of cryptic taxa is important as an accurate appreciation of diversity is crucial for a proper understanding of evolutionary and ecological processes. An example is the study of host specificity in parasitic taxa, where an apparent generalist may be found to contain a complex of several more specific species (Smith et al. 2006). Host specificity is a key life history trait that varies greatly among parasites (Poulin & Keeney 2007). While some can exploit a wide range of hosts, others are confined to just a single species. Access to additional hosts increases the resources available to a parasite. However, physiological or ecological constraints can restrict the extension of host range. Furthermore, there may be a trade-off between relaxed specificity and performance: generalism can decrease a parasites ability to adapt to each individual host species, and increase exposure to competition from other parasites (Poulin 1998). Despite the central role that host specificity plays in parasite life history, relatively little is known about how host range is determined in natural systems, and data from field studies are required to evaluate among competing ideas. In this issue, an exciting paper by Locke et al. (2010) makes a valuable contribution toward the understanding of host specificity in an important group of trematode flatworms. Using molecular methods, Locke et al. reveal an almost four-fold increase in the appreciated diversity of their focal group. In combination with a large and elegant sampling design this allows them to accurately assess host specificity for each taxon, and thus draw key insights into the factors that control host range in a dominant parasite group.

  17. Differential responses of cryptic bat species to the urban landscape.

    Science.gov (United States)

    Lintott, Paul R; Barlow, Kate; Bunnefeld, Nils; Briggs, Philip; Gajas Roig, Clara; Park, Kirsty J

    2016-04-01

    Urbanization is a key global driver in the modification of land use and has been linked to population declines even in widespread and relatively common species. Cities comprise a complex assortment of habitat types yet we know relatively little about the effects of their composition and spatial configuration on species distribution. Although many bat species exploit human resources, the majority of species are negatively impacted by urbanization. Here, we use data from the National Bat Monitoring Programme, a long-running citizen science scheme, to assess how two cryptic European bat species respond to the urban landscape. A total of 124 × 1 km(2) sites throughout Britain were surveyed. The landscape surrounding each site was mapped and classified into discrete biotope types (e.g., woodland). Generalized linear models were used to assess differences in the response to the urban environment between the two species, and which landscape factors were associated with the distributions of P. pipistrellus and P. pygmaeus. The relative prevalence of P. pygmaeus compared to P. pipistrellus was greater in urban landscapes with a higher density of rivers and lakes, whereas P. pipistrellus was frequently detected in landscapes comprising a high proportion of green space (e.g., parklands). Although P. pipistrellus is thought to be well adapted to the urban landscape, we found a strong negative response to urbanization at a relatively local scale (1 km), whilst P. pygmaeus was detected more regularly in wooded urban landscapes containing freshwater. These results show differential habitat use at a landscape scale of two morphologically similar species, indicating that cryptic species may respond differently to anthropogenic disturbance. Even species considered relatively common and well adapted to the urban landscape may respond negatively to the built environment highlighting the future challenges involved in maintaining biodiversity within an increasingly urbanized

  18. Stable structural color patterns displayed on transparent insect wings.

    Science.gov (United States)

    Shevtsova, Ekaterina; Hansson, Christer; Janzen, Daniel H; Kjærandsen, Jostein

    2011-01-11

    Color patterns play central roles in the behavior of insects, and are important traits for taxonomic studies. Here we report striking and stable structural color patterns--wing interference patterns (WIPs)--in the transparent wings of small Hymenoptera and Diptera, patterns that have been largely overlooked by biologists. These extremely thin wings reflect vivid color patterns caused by thin film interference. The visibility of these patterns is affected by the way the insects display their wings against various backgrounds with different light properties. The specific color sequence displayed lacks pure red and matches the color vision of most insects, strongly suggesting that the biological significance of WIPs lies in visual signaling. Taxon-specific color patterns are formed by uneven membrane thickness, pigmentation, venation, and hair placement. The optically refracted pattern is also stabilized by microstructures of the wing such as membrane corrugations and spherical cell structures that reinforce the pattern and make it essentially noniridescent over a large range of light incidences. WIPs can be applied to map the micromorphology of wings through direct observation and are useful in several fields of biology. We demonstrate their usefulness as identification patterns to solve cases of cryptic species complexes in tiny parasitic wasps, and indicate their potentials for research on the genetic control of wing development through direct links between the transregulatory wing landscape and interference patterns we observe in Drosophila model species. Some species display sexually dimorphic WIPs, suggesting sexual selection as one of the driving forces for their evolution.

  19. COLOR PRESCRIPTION FORM FOR COSMETIC GLOVES

    Science.gov (United States)

    A technique is described for achieving more custom-like coloring of cosmetic gloves. The method involves the use of a color prescription form which...can be used to describe in greater detail the characteristics of those portions of the human hand of greater cosmetic significance.

  20. Embedding Color Watermarks in Color Images

    Directory of Open Access Journals (Sweden)

    Wu Tung-Lin

    2003-01-01

    Full Text Available Robust watermarking with oblivious detection is essential to practical copyright protection of digital images. Effective exploitation of the characteristics of human visual perception to color stimuli helps to develop the watermarking scheme that fills the requirement. In this paper, an oblivious watermarking scheme that embeds color watermarks in color images is proposed. Through color gamut analysis and quantizer design, color watermarks are embedded by modifying quantization indices of color pixels without resulting in perceivable distortion. Only a small amount of information including the specification of color gamut, quantizer stepsize, and color tables is required to extract the watermark. Experimental results show that the proposed watermarking scheme is computationally simple and quite robust in face of various attacks such as cropping, low-pass filtering, white-noise addition, scaling, and JPEG compression with high compression ratios.

  1. Color vision and color formation in dragonflies.

    Science.gov (United States)

    Futahashi, Ryo

    2016-10-01

    Dragonflies including damselflies are colorful and large-eyed insects, which show remarkable sexual dimorphism, color transition, and color polymorphism. Recent comprehensive visual transcriptomics has unveiled an extraordinary diversity of opsin genes within the lineage of dragonflies. These opsin genes are differentially expressed between aquatic larvae and terrestrial adults, as well as between dorsal and ventral regions of adult compound eyes. Recent topics of color formation in dragonflies are also outlined. Non-iridescent blue color is caused by coherent light scattering from the quasiordered nanostructures, whereas iridescent color is produced by multilayer structures. Wrinkles or wax crystals sometimes enhances multilayer structural colors. Sex-specific and stage-specific color differences in red dragonflies is attributed to redox states of ommochrome pigments.

  2. Urine - abnormal color

    Science.gov (United States)

    ... medlineplus.gov/ency/article/003139.htm Urine - abnormal color To use the sharing features on this page, please enable JavaScript. The usual color of urine is straw-yellow. Abnormally colored urine ...

  3. Skin color - patchy

    Science.gov (United States)

    ... page: //medlineplus.gov/ency/article/003224.htm Skin color - patchy To use the sharing features on this page, please enable JavaScript. Patchy skin color is areas where the skin color is irregular. ...

  4. Variability in the South Seasonal Cryptic Terrain in MY 28-31 as Observed by MARCI

    Science.gov (United States)

    Calvin, W. M.; Cantor, B. C.; James, P. B.

    2016-09-01

    New processing techniques for MARCI daily polar mosaics show abundant variation in small scale features of the cryptic terrain. The general outline is similar in MY28-31, but local variation occurs in both bright and dark patches.

  5. Pheromone Analyses of the Anastrepha fraterculus (Diptera: Tephritidae) Cryptic Species Complex

    National Research Council Canada - National Science Library

    Radka Břízová; Adriana L. Mendonça; Lucie Vanícková; Alana L. Mendonça; Carlos Eduardo Da Silva; Aleš Tomčala; Beatriz Aguiar Jordão Paranhos; Vanessa Simões Dias; Iara Sordi Joachim-Bravo; Michal Hoskovec; Blanka Kalinová; Ruth R. Do Nascimento

    2013-01-01

    ABSTRACT The South American fruit fly Anastrepha fraterculus (Wiedemann) (Diptera: Tephritidae) cryptic species complex is presently one of the most studied pest models in terms of speciation and population mating compatibility...

  6. Shock Condition Forensics and Cryptic Phase Transformations from Crystallographic Orientation Relationships in Zircon

    Science.gov (United States)

    Timms, N. E.; Erickson, T. M.; Cavosie, A. J.; Pearce, M. A.; Reddy, S. M.; Zanetti, M.; Tohver, E.; Schmieder, M.; Nemchin, A. A.; Wittmann, A.

    2016-08-01

    We present an approach to constrain pressure and temperature conditions during impact events involving identification of cryptic histories of phase transformations from orientation relationships in shocked zircon, linked to new P-T phase diagrams.

  7. Full Color Holographic Endoscopy

    Science.gov (United States)

    Osanlou, A.; Bjelkhagen, H.; Mirlis, E.; Crosby, P.; Shore, A.; Henderson, P.; Napier, P.

    2013-02-01

    The ability to produce color holograms from the human tissue represents a major medical advance, specifically in the areas of diagnosis and teaching. This has been achieved at Glyndwr University. In corporation with partners at Gooch & Housego, Moor Instruments, Vivid Components and peninsula medical school, Exeter, UK, for the first time, we have produced full color holograms of human cell samples in which the cell boundary and the nuclei inside the cells could be clearly focused at different depths - something impossible with a two-dimensional photographic image. This was the main objective set by the peninsula medical school at Exeter, UK. Achieving this objective means that clinically useful images essentially indistinguishable from the object human cells could be routinely recorded. This could potentially be done at the tip of a holo-endoscopic probe inside the body. Optimised recording exposure and development processes for the holograms were defined for bulk exposures. This included the optimisation of in-house recording emulsions for coating evaluation onto polymer substrates (rather than glass plates), a key step for large volume commercial exploitation. At Glyndwr University, we also developed a new version of our in-house holographic (world-leading resolution) emulsion.

  8. The effect of cryptic female choice on sex allocation in simultaneous hermaphrodites

    OpenAIRE

    van Velzen, Ellen; Schärer, Lukas; Pen, Ido

    2009-01-01

    Sex allocation theory for simultaneous hermaphrodites has focused primarily on the effects of sperm competition, but the role of mate choice has so far been neglected. We present a model to study the coevolution of cryptic female choice and sex allocation in simultaneous hermaphrodites. We show that the mechanism of cryptic female choice has a strong effect on the evolutionary outcome: if individuals remove a fixed proportion of less-preferred sperm, the optimal sex allocation is more female ...

  9. Cryptic female choice favours sperm from major histocompatibility complex-dissimilar males

    OpenAIRE

    Lovlie, H.; Gillingham, M. A. F.; WORLEY K; Pizzari, T.; Richardson, David

    2013-01-01

    Cryptic female choice may enable polyandrous females to avoid inbreeding or bias offspring variability at key loci after mating. However, the role of these genetic benefits in cryptic female choice remains poorly understood. Female red junglefowl, Gallus gallus, bias sperm use in favour of unrelated males. Here, we experimentally investigate whether this bias is driven by relatedness per se, or by similarity at the major histocompatibility complex (MHC), genes central to vertebrate acquired i...

  10. Digital color imaging

    CERN Document Server

    Fernandez-Maloigne, Christine; Macaire, Ludovic

    2013-01-01

    This collective work identifies the latest developments in the field of the automatic processing and analysis of digital color images.For researchers and students, it represents a critical state of the art on the scientific issues raised by the various steps constituting the chain of color image processing.It covers a wide range of topics related to computational color imaging, including color filtering and segmentation, color texture characterization, color invariant for object recognition, color and motion analysis, as well as color image and video indexing and retrieval. <

  11. Transferring color between three-dimensional objects

    Science.gov (United States)

    Shen, Hui-Liang; Xin, John H.

    2005-04-01

    A framework for transferring image-based color between three-dimensional objects by the use of a dichromatic reflection model is proposed. The framework addresses the following issues: (1) accurate recovery of an implicit geometric coefficient, (2) calculation of body color, (3) color transfer between different illuminants, and (4) segmentation of multicolored regions. The experimental results show that high color accuracy and photorealistic effects of the synthesized images can be achieved. The proposed technique has wide applications in image-based design and visualization of three-dimensional objects.

  12. Structural color from colloidal glasses

    Science.gov (United States)

    Magkiriadou, Sofia

    When a material has inhomogeneities at a lengthscale comparable to the wavelength of light, interference can give rise to structural colors: colors that originate from the interaction of the material's microstructure with light and do not require absorbing dyes. In this thesis we study a class of these materials, called photonic glasses, where the inhomogeneities form a dense and random arrangement. Photonic glasses have angle-independent structural colors that look like those of conventional dyes. However, when this work started, there was only a handful of colors accessible with photonic glasses, mostly hues of blue. We use various types of colloidal particles to make photonic glasses, and we study, both theoretically and experimentally, how the optical properties of these glasses relate to their structure and constituent particles. Based on our observations from glasses of conventional particles, we construct a theoretical model that explains the scarcity of yellow, orange, and red photonic glasses. Guided by this model, we develop novel colloidal systems that allow a higher degree of control over structural color. We assemble glasses of soft, core-shell particles with scattering cores and transparent shells, where the resonant wavelength can be tuned independently of the reflectivity. We then encapsulate glasses of these core-shell particles into emulsion droplets of tunable size; in this system, we observe, for the first time, angle-independent structural colors that cover the entire visible spectrum. To enhance color saturation, we begin experimenting with inverse glasses, where the refractive index of the particles is lower than the refractive index of the medium, with promising results. Finally, based on our theoretical model for scattering from colloidal glasses, we begin an exploration of the color gamut that could be achieved with this technique, and we find that photonic glasses are a promising approach to a new type of long-lasting, non-toxic, and

  13. The effect of cryptic female choice on sex allocation in simultaneous hermaphrodites.

    Science.gov (United States)

    van Velzen, Ellen; Schärer, Lukas; Pen, Ido

    2009-09-07

    Sex allocation theory for simultaneous hermaphrodites has focused primarily on the effects of sperm competition, but the role of mate choice has so far been neglected. We present a model to study the coevolution of cryptic female choice and sex allocation in simultaneous hermaphrodites. We show that the mechanism of cryptic female choice has a strong effect on the evolutionary outcome: if individuals remove a fixed proportion of less-preferred sperm, the optimal sex allocation is more female biased (i.e. more biased towards egg production) than without cryptic female choice; conversely, if a fixed amount of sperm is removed, sex allocation is less female-biased than without cryptic female choice, and can easily become male biased (i.e. biased towards sperm production). Under male-biased sex allocation, hermaphroditism can become unstable and the population can split into pure males and hermaphrodites with a female-biased allocation. We discuss the idea that the evolution of sex allocation may depend on the outcome of sexual conflict over the fate of received sperm: the sperm donor may attempt to manipulate or by-pass cryptic female choice and the sperm recipient is expected to resist such manipulation. We conclude that cryptic female choice can have a strong influence on sex allocation in simultaneous hermaphrodites and strongly encourage empirical work on this question.

  14. Tracing shifts of oceanic fronts using the cryptic diversity of the planktonic foraminifera Globorotalia inflata

    Science.gov (United States)

    Morard, Raphaël.; Reinelt, Melanie; Chiessi, Cristiano M.; Groeneveld, Jeroen; Kucera, Michal

    2016-09-01

    The use of planktonic foraminifera in paleoceanographic studies relies on the assumption that morphospecies represent biological species with ecological preferences that are stable through time and space. However, genetic surveys unveiled a considerable level of diversity in most morphospecies of planktonic foraminifera. This diversity is significant for paleoceanographic applications because cryptic species were shown to display distinct ecological preferences that could potentially help refine paleoceanographic proxies. Subtle morphological differences between cryptic species of planktonic foraminifera have been reported, but so far, their applicability within paleoceanographic studies remains largely unexplored. Here we show how information on genetic diversity can be transferred to paleoceanography using Globorotalia inflata as a case study. The two cryptic species of G. inflata are separated by the Brazil-Malvinas Confluence (BMC), a major oceanographic feature in the South Atlantic. Based on this observation, we developed a morphological model of cryptic species detection in core top material. The application of the cryptic species detection model to Holocene samples implies latitudinal oscillations in the position of the confluence that are largely consistent with reconstructions obtained from stable isotope data. We show that the occurrence of cryptic species in G. inflata can be detected in the fossil record and used to trace the migration of the BMC. Since a similar degree of morphological separation as in G. inflata has been reported from other species of planktonic foraminifera, the approach presented in this study can potentially yield a wealth of new paleoceanographical proxies.

  15. Speciation on oceanic islands: rapid adaptive divergence vs. cryptic speciation in a Guadalupe Island songbird (Aves: Junco.

    Directory of Open Access Journals (Sweden)

    Pau Aleixandre

    Full Text Available The evolutionary divergence of island populations, and in particular the tempo and relative importance of neutral and selective factors, is of central interest to the study of speciation. The rate of phenotypic evolution upon island colonization can vary greatly among taxa, and cases of convergent evolution can further confound the inference of correct evolutionary histories. Given the potential lability of phenotypic characters, molecular dating of insular lineages analyzed in a phylogenetic framework provides a critical tool to test hypotheses of phenotypic divergence since colonization. The Guadalupe junco is the only insular form of the polymorphic dark-eyed junco (Junco hyemalis, and shares eye and plumage color with continental morphs, yet presents an enlarged bill and reduced body size. Here we use variation in mtDNA sequence, morphological traits and song variables to test whether the Guadalupe junco evolved rapidly following a recent colonization by a mainland form of the dark-eyed junco, or instead represents a well-differentiated "cryptic" lineage adapted to the insular environment through long-term isolation, with plumage coloration a result of evolutionary convergence. We found high mtDNA divergence of the island lineage with respect to both continental J. hyemalis and J. phaeonotus, representing a history of isolation of about 600,000 years. The island lineage was also significantly differentiated in morphological and male song variables. Moreover, and contrary to predictions regarding diversity loss on small oceanic islands, we document relatively high levels of both haplotypic and song-unit diversity on Guadalupe Island despite long-term isolation in a very small geographic area. In contrast to prevailing taxonomy, the Guadalupe junco is an old, well-differentiated evolutionary lineage, whose similarity to mainland juncos in plumage and eye color is due to evolutionary convergence. Our findings confirm the role of remote islands

  16. Video tonal stabilization via color states smoothing.

    Science.gov (United States)

    Wang, Yinting; Tao, Dacheng; Li, Xiang; Song, Mingli; Bu, Jiajun; Tan, Ping

    2014-11-01

    We address the problem of removing video color tone jitter that is common in amateur videos recorded with hand-held devices. To achieve this, we introduce color state to represent the exposure and white balance state of a frame. The color state of each frame can be computed by accumulating the color transformations of neighboring frame pairs. Then, the tonal changes of the video can be represented by a time-varying trajectory in color state space. To remove the tone jitter, we smooth the original color state trajectory by solving an L1 optimization problem with PCA dimensionality reduction. In addition, we propose a novel selective strategy to remove small tone jitter while retaining extreme exposure and white balance changes to avoid serious artifacts. Quantitative evaluation and visual comparison with previous work demonstrate the effectiveness of our tonal stabilization method. This system can also be used as a preprocessing tool for other video editing methods.

  17. Structural colors: from plasmonic to carbon nanostructures.

    Science.gov (United States)

    Xu, Ting; Shi, Haofei; Wu, Yi-Kuei; Kaplan, Alex F; Ok, Jong G; Guo, L Jay

    2011-11-18

    In addition to colorant-based pigmentation, structure is a major contributor to a material's color. In nature, structural color is often caused by the interaction of light with dielectric structures whose dimensions are on the order of visible-light wavelengths. Different optical interactions including multilayer interference, light scattering, the photonic crystal effect, and combinations thereof give rise to selective transmission or reflection of particular light wavelengths, which leads to the generation of structural color. Recent developments in nanofabrication of plasmonic and carbon nanostructures have opened another efficient way to control light properties at the subwavelength scale, including visible-light wavelength selection, which can produce structural color. In this Concept, the most relevant and representative achievements demonstrated over the last several years are presented and analyzed. These plasmonic and carbon nanostructures are believed to offer great potential for high-resolution color displays and spectral filtering applications.

  18. Resolving cryptic species complexes of major tephritid pests

    Science.gov (United States)

    Hendrichs, Jorge; Vera, M. Teresa; De Meyer, Marc; Clarke, Anthony R.

    2015-01-01

    Abstract An FAO/IAEA Co-ordinated Research Project (CRP) on “Resolution of Cryptic Species Complexes of Tephritid Pests to Overcome Constraints to SIT Application and International Trade” was conducted from 2010 to 2015. As captured in the CRP title, the objective was to undertake targeted research into the systematics and diagnostics of taxonomically challenging fruit fly groups of economic importance. The scientific output was the accurate alignment of biological species with taxonomic names; which led to the applied outcome of assisting FAO and IAEA Member States in overcoming technical constraints to the application of the Sterile Insect Technique (SIT) against pest fruit flies and the facilitation of international agricultural trade. Close to 50 researchers from over 20 countries participated in the CRP, using coordinated, multidisciplinary research to address, within an integrative taxonomic framework, cryptic species complexes of major tephritid pests. The following progress was made for the four complexes selected and studied: Anastrepha fraterculus complex – Eight morphotypes and their geographic and ecological distributions in Latin America were defined. The morphotypes can be considered as distinct biological species on the basis of differences in karyotype, sexual incompatibility, post-mating isolation, cuticular hydrocarbon, pheromone, and molecular analyses. Discriminative taxonomic tools using linear and geometric morphometrics of both adult and larval morphology were developed for this complex. Bactrocera dorsalis complex – Based on genetic, cytogenetic, pheromonal, morphometric, and behavioural data, which showed no or only minor variation between the Asian/African pest fruit flies Bactrocera dorsalis, Bactrocera papayae, Bactrocera philippinensis and Bactrocera invadens, the latter three species were synonymized with Bactrocera dorsalis. Of the five target pest taxa studied, only Bactrocera dorsalis and Bactrocera carambolae remain as

  19. A novel widespread cryptic species and phylogeographic patterns within several giant clam species (Cardiidae: Tridacna from the Indo-Pacific Ocean.

    Directory of Open Access Journals (Sweden)

    Thomas Huelsken

    Full Text Available Giant clams (genus Tridacna are iconic coral reef animals of the Indian and Pacific Oceans, easily recognizable by their massive shells and vibrantly colored mantle tissue. Most Tridacna species are listed by CITES and the IUCN Redlist, as their populations have been extensively harvested and depleted in many regions. Here, we survey Tridacna crocea and Tridacna maxima from the eastern Indian and western Pacific Oceans for mitochondrial (COI and 16S and nuclear (ITS sequence variation and consolidate these data with previous published results using phylogenetic analyses. We find deep intraspecific differentiation within both T. crocea and T. maxima. In T. crocea we describe a previously undocumented phylogeographic division to the east of Cenderawasih Bay (northwest New Guinea, whereas for T. maxima the previously described, distinctive lineage of Cenderawasih Bay can be seen to also typify western Pacific populations. Furthermore, we find an undescribed, monophyletic group that is evolutionarily distinct from named Tridacna species at both mitochondrial and nuclear loci. This cryptic taxon is geographically widespread with a range extent that minimally includes much of the central Indo-Pacific region. Our results reinforce the emerging paradigm that cryptic species are common among marine invertebrates, even for conspicuous and culturally significant taxa. Additionally, our results add to identified locations of genetic differentiation across the central Indo-Pacific and highlight how phylogeographic patterns may differ even between closely related and co-distributed species.

  20. Statistical pressure snakes based on color images.

    Energy Technology Data Exchange (ETDEWEB)

    Schaub, Hanspeter [ORION International Technologies, Albuquerque, NM

    2004-05-01

    The traditional mono-color statistical pressure snake was modified to function on a color image with target errors defined in HSV color space. Large variations in target lighting and shading are permitted if the target color is only specified in terms of hue. This method works well with custom targets where the target is surrounded by a color of a very different hue. A significant robustness increase is achieved in the computer vision capability to track a specific target in an unstructured, outdoor environment. By specifying the target color to contain hue, saturation and intensity values, it is possible to establish a reasonably robust method to track general image features of a single color. This method is convenient to allow the operator to select arbitrary targets, or sections of a target, which have a common color. Further, a modification to the standard pixel averaging routine is introduced which allows the target to be specified not only in terms of a single color, but also using a list of colors. These algorithms were tested and verified by using a web camera attached to a personal computer.

  1. Application of oxime-diversification to optimize ligand interactions within a cryptic pocket of the polo-like kinase 1 polo-box domain | Center for Cancer Research

    Science.gov (United States)

    By a process involving initial screening of a set of 87 aldehydes using an oxime ligation-based strategy, we were able to achieve a several-fold affinity enhancement over one of the most potent previously known polo-like kinase 1 (Plk1) polo-box domain (PBD) binding inhibitors. This improved binding may result by accessing a newly identified auxiliary region proximal to a key hydrophobic cryptic pocket on the surface of the protein. Our findings could have general applicability to the design of PBD-binding antagonists. Cover design by Joseph Myer

  2. Application of oxime-diversification to optimize ligand interactions within a cryptic pocket of the polo-like kinase 1 polo-box domain | Center for Cancer Research

    Science.gov (United States)

    By a process involving initial screening of a set of 87 aldehydes using an oxime ligation-based strategy, we were able to achieve a several-fold affinity enhancement over one of the most potent previously known polo-like kinase 1 (Plk1) polo-box domain (PBD) binding inhibitors. This improved binding may result by accessing a newly identified auxiliary region proximal to a key hydrophobic cryptic pocket on the surface of the protein. Our findings could have general applicability to the design of PBD-binding antagonists.

  3. Application of oxime-diversification to optimize ligand interactions within a cryptic pocket of the polo-like kinase 1 polo-box domain.

    Science.gov (United States)

    Zhao, Xue Zhi; Hymel, David; Burke, Terrence R

    2016-10-15

    By a process involving initial screening of a set of 87 aldehydes using an oxime ligation-based strategy, we were able to achieve a several-fold affinity enhancement over one of the most potent previously known polo-like kinase 1 (Plk1) polo-box domain (PBD) binding inhibitors. This improved binding may result by accessing a newly identified auxiliary region proximal to a key hydrophobic cryptic pocket on the surface of the protein. Our findings could have general applicability to the design of PBD-binding antagonists. Published by Elsevier Ltd.

  4. Color identification testing device

    Science.gov (United States)

    Brawner, E. L.; Martin, R.; Pate, W.

    1970-01-01

    Testing device, which determines ability of a technician to identify color-coded electric wires, is superior to standard color blindness tests. It tests speed of wire selection, detects partial color blindness, allows rapid testing, and may be administered by a color blind person.

  5. Texture affects color emotion

    NARCIS (Netherlands)

    Lucassen, M.P.; Gevers, T.; Gijsenij, A.

    2011-01-01

    Several studies have recorded color emotions in subjects viewing uniform color (UC) samples. We conduct an experiment to measure and model how these color emotions change when texture is added to the color samples. Using a computer monitor, our subjects arrange samples along four scales: warm-cool,

  6. Texture affects color emotion

    NARCIS (Netherlands)

    Lucassen, M.P.; Gevers, T.; Gijsenij, A.

    2011-01-01

    Several studies have recorded color emotions in subjects viewing uniform color (UC) samples. We conduct an experiment to measure and model how these color emotions change when texture is added to the color samples. Using a computer monitor, our subjects arrange samples along four scales: warm-cool,

  7. A Color Image Edge Detection Algorithm Based on Color Difference

    Science.gov (United States)

    Zhuo, Li; Hu, Xiaochen; Jiang, Liying; Zhang, Jing

    2016-12-01

    Although image edge detection algorithms have been widely applied in image processing, the existing algorithms still face two important problems. On one hand, to restrain the interference of noise, smoothing filters are generally exploited in the existing algorithms, resulting in loss of significant edges. On the other hand, since the existing algorithms are sensitive to noise, many noisy edges are usually detected, which will disturb the subsequent processing. Therefore, a color image edge detection algorithm based on color difference is proposed in this paper. Firstly, a new operation called color separation is defined in this paper, which can reflect the information of color difference. Then, for the neighborhood of each pixel, color separations are calculated in four different directions to detect the edges. Experimental results on natural and synthetic images show that the proposed algorithm can remove a large number of noisy edges and be robust to the smoothing filters. Furthermore, the proposed edge detection algorithm is applied in road foreground segmentation and shadow removal, which achieves good performances.

  8. Sensory Drive, Color, and Color Vision.

    Science.gov (United States)

    Price, Trevor D

    2017-08-01

    Colors often appear to differ in arbitrary ways among related species. However, a fraction of color diversity may be explained because some signals are more easily perceived in one environment rather than another. Models show that not only signals but also the perception of signals should regularly evolve in response to different environments, whether these primarily involve detection of conspecifics or detection of predators and prey. Thus, a deeper understanding of how perception of color correlates with environmental attributes should help generate more predictive models of color divergence. Here, I briefly review our understanding of color vision in vertebrates. Then I focus on opsin spectral tuning and opsin expression, two traits involved in color perception that have become amenable to study. I ask how opsin tuning is correlated with ecological differences, notably the light environment, and how this potentially affects perception of conspecific colors. Although opsin tuning appears to evolve slowly, opsin expression levels are more evolutionarily labile but have been difficult to connect to color perception. The challenge going forward will be to identify how physiological differences involved in color vision, such as opsin expression levels, translate into perceptual differences, the selection pressures that have driven those differences, and ultimately how this may drive evolution of conspecific colors.

  9. Industrial Color Physics

    CERN Document Server

    Klein, Georg A

    2010-01-01

    This unique book starts with a short historical overview of the development of the theories of color vision and applications of industrial color physics. The three dominant factors producing color - light source, color sample, and observer - are described in detail. The standardized color spaces are shown and related color values are applied to characteristic color qualities of absorption as well as of effect colorants. The fundamentals of spectrometric and colorimetric measuring techniques together with specific applications are described. Theoretical models for radiative transfer in transparent, translucent, and opaque layers are detailed; the two, three, and multi-flux approximations are presented for the first time in a coherent formalism. These methods constitute the fundamentals not only for the important classical methods, but also modern methods of recipe prediction applicable to all known colorants. The text is supplied with 52 tables, more than 200 partially colored illustrations, an appendix, and a...

  10. From Cryptic Toward Canonical Pre-mRNA Splicing in Pompe Disease: a Pipeline for the Development of Antisense Oligonucleotides

    Directory of Open Access Journals (Sweden)

    Atze J Bergsma

    2016-01-01

    Full Text Available While 9% of human pathogenic variants have an established effect on pre-mRNA splicing, it is suspected that an additional 20% of otherwise classified variants also affect splicing. Aberrant splicing includes disruption of splice sites or regulatory elements, or creation or strengthening of cryptic splice sites. For the majority of variants, it is poorly understood to what extent and how these may affect splicing. We have identified cryptic splicing in an unbiased manner. Three types of cryptic splicing were analyzed in the context of pathogenic variants in the acid α-glucosidase gene causing Pompe disease. These involved newly formed deep intronic or exonic cryptic splice sites, and a natural cryptic splice that was utilized due to weakening of a canonical splice site. Antisense oligonucleotides that targeted the identified cryptic splice sites repressed cryptic splicing at the expense of canonical splicing in all three cases, as shown by reverse-transcriptase-quantitative polymerase chain reaction analysis and by enhancement of acid α-glucosidase enzymatic activity. This argues for a competition model for available splice sites, including intact or weakened canonical sites and natural or newly formed cryptic sites. The pipeline described here can detect cryptic splicing and correct canonical splicing using antisense oligonucleotides to restore the gene defect.

  11. Copepod Behavior in ``Cryptic Blooms'' of Toxic Algae

    Science.gov (United States)

    True, A. C.; Webster, D. R.; Weissburg, M. J.; Yen, J.

    2014-11-01

    Copepods,Acartia tonsa and Temora longicornis, were exposed to thin layers of exudates from the toxic dinoflagellate Karenia brevis (1 - 10,000 cells/mL) (i.e. models of ``cryptic blooms'' of toxic phytoplankton). Planar laser-induced fluorescence (PLIF) was used to quantify the spatiotemporal structure of the layer allowing for correlation of behavioral responses with toxin levels. Both species explicitly avoided the exudate layer and the vicinity of the layer. Measures of path kinematics (swimming speed, turn frequency) by location (in-layer vs. out-of-layer) and exposure (pre-contact vs. post-contact) revealed some similarities, but also significant differences, in trends for each species. A. tonsa significantly increases swimming speed and swimming speed variability in the exudate layer and post-contact, whereas T. longicornis slightly increases both in-layer and slightly reduces both post-contact. Both species increase turn frequency in-layer and post-contact with increasing K. brevis exudate concentration. Path fracticality indicates that A. tonsatrajectories became more diffuse/sinuous and T. longicornis trajectories became more linear/ballistic (trending effects). Regression analyses revealed that the rate of change of behavior with increasing exudate concentration for A. tonsa was thrice to fifty times that of T. longicornis. Toxic K. brevis can essentially eliminate top-down grazer control ,another sinister means by which it gains a competitive advantage over the local phytoplankton taxa.

  12. Cryptic Polyketide Synthase Genes in Non-Pathogenic Clostridium SPP

    Science.gov (United States)

    Behnken, Swantje; Hertweck, Christian

    2012-01-01

    Modular type I polyketide synthases (PKS) produce a vast array of bacterial metabolites with highly diverse biological functions. Notably, all known polyketides were isolated from aerobic bacteria, and yet no example has been reported for strict anaerobes. In this study we explored the diversity and distribution of PKS genes in the genus Clostridium. In addition to comparative genomic analyses combined with predictions of modular type I polyketide synthase (PKS) gene clusters in sequenced genomes of Clostridium spp., a representative selection of other species inhabiting a variety of ecological niches was investigated by PCR screening for PKS genes. Our data reveal that all studied pathogenic Clostridium spp. are devoid of putative PKS genes. In stark contrast, cryptic PKS genes are widespread in genomes of non-pathogenic Clostridium species. According to phylogenetic analyses, the Clostridium PKS genes have unusual and diverse origins. However, reverse transcription quantitative PCR demonstrates that these genes are silent under standard cultivation conditions, explaining why the related metabolites have been overlooked until now. This study presents clostridia as a putative source for novel bioactive polyketides. PMID:22235310

  13. Cryptic microsporidian parasites differentially affect invasive and native Artemia spp.

    Science.gov (United States)

    Rode, Nicolas O; Lievens, Eva J P; Segard, Adeline; Flaven, Elodie; Jabbour-Zahab, Roula; Lenormand, Thomas

    2013-09-01

    We investigated the host specificity of two cryptic microsporidian species (Anostracospora rigaudi and Enterocytospora artemiae) infecting invasive (Artemia franciscana) and native (Artemia parthenogenetica) hosts in sympatry. Anostracospora rigaudi was on average four times more prevalent in the native host, whereas E. artemiae was three times more prevalent in the invasive host. Infection with An. rigaudi strongly reduced female reproduction in both host species, whereas infection with E. artemiae had weaker effects on female reproduction. We contrasted microsporidian prevalence in native A. franciscana populations (New World) and in both invaded and non-invaded Artemia populations (Old World). At a community level, microsporidian prevalence was twice as high in native compared with invasive hosts, due to the contrasting host-specificity of An. rigaudi and E. artemiae. At a higher biogeographical level, microsporidian prevalence in A. franciscana did not differ between the invaded populations and the native populations used for the introduction. Although E. artemiae was the only species found both in New and Old World populations, no evidence of its co-introduction with the invasive host was found in our experimental and phylogeographic tests. These results suggest that the success of A. franciscana invasion is probably due to a lower susceptibility to virulent microsporidian parasites rather than to decreased microsporidian prevalence compared with A. parthenogenetica or to lower microsporidian virulence in introduced areas.

  14. Cryptic Ponto-Caspian Bighead Gobies (genus Ponticola, Gobiidae, Perciformes

    Directory of Open Access Journals (Sweden)

    Dmitry Alexandrovich Medvedev

    2015-11-01

    In this way, P. iljini, P. gorlap, and P. kessleri represent a group of distinct allopatric cryptic species with very low morphological divergence. The start of the divergence between P. kessleri and the Caspian species can be dated no earlier than the end of the Miocene (5.8-5.0 million years ago when the Pontian sea-lake has divided into two separate brackish pools: the later Pontian sea-lake basin and Babadzhanskoe sea-lake in the southern part of the Caspian depression. But, at the same time, it can be dated not later than Pleistocene (2.0-0.7 Ma, when the last connection of the Caspian and the Black Sea through the Manych has been stopped. The ancestors of P. iljini could penetrate to the east coast of the Caspian Sea during the period of the largest transgressions, Akchagyl (2.5-2.0 Ma or Apsheron (2.0-0.7 Ma. Their isolation in the Mangyshlak Peninsula region from other Caspian Bighead goby populations has been provided by two hypersaline bays, limiting the peninsula from the north (Mërtvyj Kultuk and Kajdak bays with salinity of 30 ‰ and above and from the south (Kara-Bogaz-Gol Bay with salinity of 300-350 ‰ and above, as well as the lack of a network of rivers on the peninsula.

  15. Cryptic adaptive radiation in tropical forest trees in New Caledonia.

    Science.gov (United States)

    Pillon, Yohan; Hopkins, Helen C F; Rigault, Frédéric; Jaffré, Tanguy; Stacy, Elizabeth A

    2014-04-01

    The causes of the species richness of tropical trees are poorly understood, in particular the roles of ecological factors such as soil composition. The nickel(Ni)-hyperaccumulating tree genus Geissois (Cunoniaceae) from the South-west Pacific was chosen as a model of diversification on different substrates. Here, we investigated the leaf element compositions, spatial distributions and phylogeny of all species of Geissois occurring on New Caledonia. We found that New Caledonian Geissois descended from a single colonist and diversified relatively quickly into 13 species. Species on ultramafic and nonultramafic substrates showed contrasting patterns of leaf element composition and range overlap. Those on nonultramafic substrates were largely sympatric but had distinct leaf element compositions. By contrast, species on ultramafic substrates showed similar leaf element composition, but occurred in many cases exclusively in allopatry. Further, earlier work showed that at least three out of these seven species use different molecules to bind Ni. Geissois qualifies as a cryptic adaptive radiation, and may be the first such example in a lineage of tropical forest trees. Variation in biochemical strategies for coping with both typical and adverse soil conditions may help to explain the diversification and coexistence of tropical forest trees on similar soil types.

  16. Scandinavian Oncophorus (Bryopsida, Oncophoraceae: species, cryptic species, and intraspecific variation

    Directory of Open Access Journals (Sweden)

    Lars Hedenäs

    2017-05-01

    Full Text Available Scandinavian members of the acrocarpous moss genus Oncophorus were revised after field observations had suggested unrecognized diversity. Based on molecular (nuclear: internal transcribed spacers 1 and 2, ITS; plastid: trnGUCC G2 intron, trnG, rps4 gene + trnS-rps4 spacer, rps4 and morphological evidence, four morphologically distinguishable species are recognized, Oncophorus elongatus (I.Hagen Hedenäs, O. integerrimus Hedenäs sp. nov. (syn. O. virens var. elongatus Limpr., O. virens (Hedw. Brid., and O. wahlenbergii Brid. (O. sardous Herzog, syn. nov.. Oncophorus elongatus was earlier recognized, but much of its variation was hidden within O. wahlenbergii. Its circumscription is here expanded to include plants with long leaves having mostly denticulate or sharply denticulate upper margins and with long and narrow marginal cells in the basal portion of the sheathing leaf lamina. The new species O. integerrimus sp. nov. differs from O. virens in having more loosely incurved leaves and entire or almost entire upper leaf margins. Besides these characters, the species in the respective pairs differ in quantitative features of the leaf lamina cells. Several cryptic entities were found, in several cases as molecularly distinct as some of the morphologically recognizable species, and phylogeographic structure is present within O. elongatus and O. virens.

  17. Further insight into reproductive incompatibility between putative cryptic species of the Bemisia tabaci whitefly complex.

    Science.gov (United States)

    Qin, Li; Pan, Li-Long; Liu, Shu-Sheng

    2016-04-01

    The whitefly Bemisia tabaci (Gennadius) (Hemiptera: Aleyrodidae), with its global distribution and extensive genetic diversity, is now known to be a complex of over 35 cryptic species. However, a satisfactory resolution of the systematics of this species complex is yet to be achieved. Here, we designed experiments to examine reproductive compatibility among species with different levels of mitochondrial cytochrome oxidase I (mtCOI) divergence. The data show that putative species with mtCOI divergence of >8% between them consistently exhibited complete reproductive isolation. However, two of the putative species, Asia II 9 and Asia II 3, with mtCOI divergence of 4.47% between them, exhibited near complete reproductive compatibility in one direction of their cross, and partial reproductive compatibility in the other direction. Together with some recent reports on this topic from the literature, our data indicates that, while divergence in the mtCOI sequences provides a valid molecular marker for species delimitation in most clades, more genetic markers and more sophisticated molecular phylogeny will be required to achieve adequate delimitation of all species in this whitefly complex. While many attempts have been made to examine the reproductive compatibility among genetic groups of the B. tabaci complex, our study represents the first effort to conduct crossing experiments with putative species that were chosen with considerations of their genetic divergence. In light of the new data, we discuss the best strategy and protocols to conduct further molecular phylogenetic analysis and crossing trials, in order to reveal the overall pattern of reproductive incompatibility among species of this whitefly complex.

  18. Sexually dichromatic coloration reflects size and immunocompetence in female Spanish terrapins, Mauremys leprosa

    Science.gov (United States)

    Ibáñez, Alejandro; Marzal, Alfonso; López, Pilar; Martín, José

    2013-12-01

    Many studies have shown the importance of colorful ornamentation in mate choosiness or intrasexual conflict. However, research on color ornaments has focused mainly on birds, lizards or fish, but remains practically unknown in other animal groups such as turtles. In addition, female ornaments and their relation with sexual selection also remain almost unknown. Here, we measured the coloration of the shell and the limb stripes of male and female Spanish terrapins Mauremys leprosa and explored the existence of sexual dichromatism and the relation of color characteristics with body size and health state estimated from the immune response to the injection of an antigen (phytohaemagglutinin test). Our results showed that shell coloration, which could be constrained by natural selection to be cryptic, changed with body size, but did not differ between sexes. In contrast, females had brighter and less ultraviolet-saturated and more orange-saturated limb stripes than males. In females, interindividual variation in limb stripe coloration was related with body size and immune response suggesting that this coloration may inform honestly about multiple traits that could be important in sexual selection. In contrast, coloration of limb stripes of males was duller than in females, and was not related with any trait suggesting that coloration is not important in sexual selection for males.

  19. Color management of porcelain veneers: influence of dentin and resin cement colors

    NARCIS (Netherlands)

    Dozic, A.; Tsagkari, M.; Khashayar, G.; Aboushelib, M.

    2010-01-01

    Objective: Porcelain veneers have become an interesting treatment option to correct the shape and color of anterior teeth. Because of their limited thickness and high translucency, achieving a good color match is influenced by several variables. The aim of this work was to investigate the influence

  20. Absolute and relative colorimetric evaluation for precise color on screen

    Science.gov (United States)

    Herbert, Franz H.; Kirkenaer, Jo S.; Ladson, Jack A.

    2003-01-01

    This paper deals with assessing and controlling the variables required to present accurate and precise color on screen. The objective is to generate a representation of an accurate, precise, soft copy of an object color with little difference in their color and appearance. This opens new vistas in product design and quality control. We obtained duplicate sets of 23 colors including two neutral chips that are distributed and widely spaced at different color centers throughout color space. We used these sets to evaluate color and appearance at different locations remote to one another. We obtained CIE L* a* b* values for the color representations displayed on the screen under multiple illuminants, and compared those colorimetric values to the corresponding object color sample values with a Pearson Correlation coefficient greater than 0.95 for all illuminants. Multiple personnel in different locations performed psychometric evaluations of the color and appearance presented by the display to that of the perceived color and appearance of the object under multiple illuminants. We quantitatively assessed and ranked the quality of the perceived color matches. We judged the precise color on screen to be accurate using our rating system and applying business statistics to evaluate and quantify the results. The evaluation of the data validate that we achieved excellent colorimetric (measured) accuracy and quantifiable perceptual agreement of the soft copy color to the color and appearance of objects.

  1. Micro-Expression Recognition Using Color Spaces.

    Science.gov (United States)

    Wang, Su-Jing; Yan, Wen-Jing; Li, Xiaobai; Zhao, Guoying; Zhou, Chun-Guang; Fu, Xiaolan; Yang, Minghao; Tao, Jianhua

    2015-12-01

    Micro-expressions are brief involuntary facial expressions that reveal genuine emotions and, thus, help detect lies. Because of their many promising applications, they have attracted the attention of researchers from various fields. Recent research reveals that two perceptual color spaces (CIELab and CIELuv) provide useful information for expression recognition. This paper is an extended version of our International Conference on Pattern Recognition paper, in which we propose a novel color space model, tensor independent color space (TICS), to help recognize micro-expressions. In this paper, we further show that CIELab and CIELuv are also helpful in recognizing micro-expressions, and we indicate why these three color spaces achieve better performance. A micro-expression color video clip is treated as a fourth-order tensor, i.e., a four-dimension array. The first two dimensions are the spatial information, the third is the temporal information, and the fourth is the color information. We transform the fourth dimension from RGB into TICS, in which the color components are as independent as possible. The combination of dynamic texture and independent color components achieves a higher accuracy than does that of RGB. In addition, we define a set of regions of interests (ROIs) based on the facial action coding system and calculated the dynamic texture histograms for each ROI. Experiments are conducted on two micro-expression databases, CASME and CASME 2, and the results show that the performances for TICS, CIELab, and CIELuv are better than those for RGB or gray.

  2. Cryptic within cryptic: genetics, morphometrics, and bioacoustics delimitate a new species of Eleutherodactylus (Anura: Eleutherodactylidae) from Eastern Cuba.

    Science.gov (United States)

    Rodríguez, Ariel; Dugo-Cota, Álvaro; Montero-Mendieta, Santiago; Gonzalez-Voyer, Alejandro; Bosch, Roberto Alonso; Vences, Miguel; Vilà, Carles

    2017-01-20

    We studied the variation in genetics, bioacustics, and morphology in Eleutherodactylus glamyrus, a regionally endemic frog species restricted to high elevations in the Sierra Maestra Massif, Western Cuba that was originally described as a cryptic species hidden under the name E. auriculatus. Genetic analysis of mtDNA sequences of the 16S and cob genes identify two allopatric and strongly supported mitochondrial clades (phylogroups) which also showed no haplotype sharing in the nuclear Rag-1 gene. Bioacustic, and morphological comparisons concordantly identify these two phylogroups as independent evolutionary lineages. Therefore, we herein restrict the name Eleutherodactylus glamyrus Estrada and Hedges to populations represented in our analyses as the western phylogroup (Cordillera del Turquino to Pico La Bayamesa) and consider specimens from the eastern phylogroup (Sierra del Cobre) to represent a new species described and named as Eleutherodactylus cattus. Our results add to the growing list of Eleutherodactylus species endemic to Cuba and highlight the importance of combining different sources of evidence for obtaining robust assessments of species limits in amphibians.

  3. A Novel Mechanism for Color Vision: Pupil Shape and Chromatic Aberration Can Provide Spectral Discrimination for Color Blind Organisms.

    OpenAIRE

    Stubbs, Alexander L.; Stubbs, Christopher William

    2016-01-01

    We present a mechanism by which organisms with only a single photoreceptor, that have a monochromatic view of the world, can achieve color discrimination. The combination of an off axis pupil and the principle of chromatic aberration (where light of different colors focus at different distances behind a lens) can combine to provide color-blind animals with a way to distinguish colors. As a specific example we constructed a computer model of the visual system of cephalopods, (octopus, squid, a...

  4. Dinosaur origin of egg color: oviraptors laid blue-green eggs

    Directory of Open Access Journals (Sweden)

    Jasmina Wiemann

    2017-08-01

    Full Text Available Protoporphyrin (PP and biliverdin (BV give rise to the enormous diversity in avian egg coloration. Egg color serves several ecological purposes, including post-mating signaling and camouflage. Egg camouflage represents a major character of open-nesting birds which accomplish protection of their unhatched offspring against visually oriented predators by cryptic egg coloration. Cryptic coloration evolved to match the predominant shades of color found in the nesting environment. Such a selection pressure for the evolution of colored or cryptic eggs should be present in all open nesting birds and relatives. Many birds are open-nesting, but protect their eggs by continuous brooding, and thus exhibit no or minimal eggshell pigmentation. Their closest extant relatives, crocodiles, protect their eggs by burial and have unpigmented eggs. This phylogenetic pattern led to the assumption that colored eggs evolved within crown birds. The mosaic evolution of supposedly avian traits in non-avian theropod dinosaurs, however, such as the supposed evolution of partially open nesting behavior in oviraptorids, argues against this long-established theory. Using a double-checking liquid chromatography ESI-Q-TOF mass spectrometry routine, we traced the origin of colored eggs to their non-avian dinosaur ancestors by providing the first record of the avian eggshell pigments protoporphyrin and biliverdin in the eggshells of Late Cretaceous oviraptorid dinosaurs. The eggshell parataxon Macroolithus yaotunensis can be assigned to the oviraptor Heyuannia huangi based on exceptionally preserved, late developmental stage embryo remains. The analyzed eggshells are from three Late Cretaceous fluvial deposits ranging from eastern to southernmost China. Reevaluation of these taphonomic settings, and a consideration of patterns in the porosity of completely preserved eggs support an at least partially open nesting behavior for oviraptorosaurs. Such a nest arrangement corresponds

  5. Integrating molecular and morphological approaches for characterizing parasite cryptic species: implications for parasitology.

    Science.gov (United States)

    Nadler, Steven A; DE León, Gerardo Pérez-Ponce

    2011-11-01

    Herein we review theoretical and methodological considerations important for finding and delimiting cryptic species of parasites (species that are difficult to recognize using traditional systematic methods). Applications of molecular data in empirical investigations of cryptic species are discussed from an historical perspective, and we evaluate advantages and disadvantages of approaches that have been used to date. Developments concerning the theory and practice of species delimitation are emphasized because theory is critical to interpretation of data. The advantages and disadvantages of different molecular methodologies, including the number and kind of loci, are discussed relative to tree-based approaches for detecting and delimiting cryptic species. We conclude by discussing some implications that cryptic species have for research programmes in parasitology, emphasizing that careful attention to the theory and operational practices involved in finding, delimiting, and describing new species (including cryptic species) is essential, not only for fully characterizing parasite biodiversity and broader aspects of comparative biology such as systematics, evolution, ecology and biogeography, but to applied research efforts that strive to improve development and understanding of epidemiology, diagnostics, control and potential eradication of parasitic diseases.

  6. Cryptic diversity and ecosystem functioning: a complex tale of differential effects on decomposition.

    Science.gov (United States)

    De Meester, N; Gingold, R; Rigaux, A; Derycke, S; Moens, T

    2016-10-01

    Marine ecosystems are experiencing accelerating population and species loss. Some ecosystem functions are decreasing and there is growing interest in the link between biodiversity and ecosystem functioning. The role of cryptic (morphologically identical but genetically distinct) species in this biodiversity-ecosystem functioning link is unclear and has not yet been formally tested. We tested if there is a differential effect of four cryptic species of the bacterivorous nematode Litoditis marina on the decomposition process of macroalgae. Bacterivorous nematodes can stimulate or slow down bacterial activity and modify the bacterial assemblage composition. Moreover, we tested if interspecific interactions among the four cryptic species influence the decomposition process. A laboratory experiment with both mono- and multispecific nematode cultures was conducted, and loss of organic matter and the activity of two key extracellular enzymes for the degradation of phytodetritus were assessed. L. marina mainly influenced qualitative aspects of the decomposition process rather than its overall rate: an effect of the nematodes on the enzymatic activities became manifest, although no clear nematode effect on bulk organic matter weight loss was found. We also demonstrated that species-specific effects on the decomposition process existed. Combining the four cryptic species resulted in high competition, with one dominant species, but without complete exclusion of other species. These interspecific interactions translated into different effects on the decomposition process. The species-specific differences indicated that each cryptic species may play an important and distinct role in ecosystem functioning. Functional differences may result in coexistence among very similar species.

  7. DNA barcoding uncovers cryptic diversity in 50% of deep-sea Antarctic polychaetes.

    Science.gov (United States)

    Brasier, Madeleine J; Wiklund, Helena; Neal, Lenka; Jeffreys, Rachel; Linse, Katrin; Ruhl, Henry; Glover, Adrian G

    2016-11-01

    The Antarctic marine environment is a diverse ecosystem currently experiencing some of the fastest rates of climatic change. The documentation and management of these changes requires accurate estimates of species diversity. Recently, there has been an increased recognition of the abundance and importance of cryptic species, i.e. those that are morphologically identical but genetically distinct. This article presents the largest genetic investigation into the prevalence of cryptic polychaete species within the deep Antarctic benthos to date. We uncover cryptic diversity in 50% of the 15 morphospecies targeted through the comparison of mitochondrial DNA sequences, as well as 10 previously overlooked morphospecies, increasing the total species richness in the sample by 233%. Our ability to describe universal rules for the detection of cryptic species within polychaetes, or normalization to expected number of species based on genetic data is prevented by taxon-specific differences in phylogenetic outputs and genetic variation between and within potential cryptic species. These data provide the foundation for biogeographic and functional analysis that will provide insight into the drivers of species diversity and its role in ecosystem function.

  8. Coloring mixed hypergraphs

    CERN Document Server

    Voloshin, Vitaly I

    2002-01-01

    The theory of graph coloring has existed for more than 150 years. Historically, graph coloring involved finding the minimum number of colors to be assigned to the vertices so that adjacent vertices would have different colors. From this modest beginning, the theory has become central in discrete mathematics with many contemporary generalizations and applications. Generalization of graph coloring-type problems to mixed hypergraphs brings many new dimensions to the theory of colorings. A main feature of this book is that in the case of hypergraphs, there exist problems on both the minimum and th

  9. "Cryptic" diagenesis and its implications for speleothem geochronologies

    Science.gov (United States)

    Bajo, Petra; Hellstrom, John; Frisia, Silvia; Drysdale, Russell; Black, Jay; Woodhead, Jon; Borsato, Andrea; Zanchetta, Giovanni; Wallace, Malcolm W.; Regattieri, Eleonora; Haese, Ralf

    2016-09-01

    Speleothems are usually considered as one of the most amenable palaeoclimate archives for U-series dating. A number of studies in recent years, however, report cases of diagenetic alteration which compromises the use of U-series systematics in speleothems, resulting in inaccurate U-Th ages. Here we present the results of a high-resolution U-Th dating study of a stalagmite (CC26) from Corchia Cave in Italy where we document a number of departures from an otherwise well-defined age-depth model, and explore potential causes for these outliers. Unlike examples illustrated in previous studies, CC26 contains no visible evidence of neomorphism, and appears, at least superficially, ideally suited to dating. Good reproducibility obtained between multi-aliquot U-Th analyses removes any possibility of analytical issues contributing to these outliers. Furthermore, replicate analyses of samples from the same stratigraphic layer yielded ages in stratigraphic sequence, implying very localized open-system behavior. Uranium loss is suggested as a causative mechanism on account of the fact that all the outliers are older than their assumed true age. A limited number of micro-voids were observed under micro-CT analyses, and it is proposed that these were pathways for U loss. Uranium-loss modelling allows us to constrain the possible timing of diagenetic alteration and indicates that the precursor for the outlier with the largest age discrepancy (309%) must have been aragonite. This study indicates that visibly unaltered speleothems may still contain small domains that have experienced post-depositional alteration. Such "cryptic" diagenesis, as recorded in this stalagmite, has implications for the constancy of accuracy of the U-series dating technique, and suggests a need for careful examination of speleothems prior to dating, particularly in low-resolution U-Th studies.

  10. Cryptic sex in the smallest eukaryotic marine green alga.

    Science.gov (United States)

    Grimsley, Nigel; Péquin, Bérangère; Bachy, Charles; Moreau, Hervé; Piganeau, Gwenaël

    2010-01-01

    Ostreococcus spp. are common worldwide oceanic picoeukaryotic pelagic algae. The complete genomes of three strains from different ecological niches revealed them to represent biologically distinct species despite their identical cellular morphologies (cryptic species). Their tiny genomes (13 Mb), with approximately 20 chromosomes, are colinear and densely packed with coding sequences, but no sexual life cycle has been described. Seventeen new strains of one of these species, Ostreococcus tauri, were isolated from 98 seawater samplings from the NW Mediterranean by filtering, culturing, cloning, and plating for single colonies and identification by sequencing their ribosomal 18S gene. In order to find the genetic markers for detection of polymorphisms and sexual recombination, we used an in silico approach to screen available genomic data. Intergenic regions of DNA likely to evolve neutrally were analyzed following polymerase chain reaction amplification of sequences using flanking primers from adjacent conserved coding sequences that were present as syntenic pairs in two different species of Ostreococcus. Analyses of such DNA regions from eight marker loci on two chromosomes from each strain revealed that the isolated O. tauri clones were haploid and that the overall level of polymorphism was approximately 0.01. Four different genetic tests for recombination showed that sexual exchanges must be inferred to account for the between-locus and between-chromosome marker combinations observed. However, our data suggest that sexual encounters are infrequent because we estimate the frequency of meioses/mitoses among the sampled strains to be 10(-6). Ostreococcus tauri and related species encode and express core genes for mitosis and meiosis, but their mechanisms of cell division and recombination, nevertheless, remain enigmatic because a classical eukaryotic spindle with 40 canonical microtubules would be much too large for the available approximately 0.9-microm(3) cellular

  11. Cryptic population dynamics: rapid evolution masks trophic interactions.

    Directory of Open Access Journals (Sweden)

    Takehito Yoshida

    2007-09-01

    Full Text Available Trophic relationships, such as those between predator and prey or between pathogen and host, are key interactions linking species in ecological food webs. The structure of these links and their strengths have major consequences for the dynamics and stability of food webs. The existence and strength of particular trophic links has often been assessed using observational data on changes in species abundance through time. Here we show that very strong links can be completely missed by these kinds of analyses when changes in population abundance are accompanied by contemporaneous rapid evolution in the prey or host species. Experimental observations, in rotifer-alga and phage-bacteria chemostats, show that the predator or pathogen can exhibit large-amplitude cycles while the abundance of the prey or host remains essentially constant. We know that the species are tightly linked in these experimental microcosms, but without this knowledge, we would infer from observed patterns in abundance that the species are weakly or not at all linked. Mathematical modeling shows that this kind of cryptic dynamics occurs when there is rapid prey or host evolution for traits conferring defense against attack, and the cost of defense (in terms of tradeoffs with other fitness components is low. Several predictions of the theory that we developed to explain the rotifer-alga experiments are confirmed in the phage-bacteria experiments, where bacterial evolution could be tracked. Modeling suggests that rapid evolution may also confound experimental approaches to measuring interaction strength, but it identifies certain experimental designs as being more robust against potential confounding by rapid evolution.

  12. Cryptic diversity and symbiont interactions in rock-posy lichens.

    Science.gov (United States)

    Leavitt, Steven D; Kraichak, Ekaphan; Vondrak, Jan; Nelsen, Matthew P; Sohrabi, Mohammad; Perez-Ortega, Sergio; St Clair, Larry L; Lumbsch, H Thorsten

    2016-06-01

    Identifying factors that influence species interactions is central to research in symbiotic systems. While lichens represent iconic models of symbiosis and play important roles in understanding the biology of symbiotic interactions, patterns of interactions in lichen symbionts and mechanisms governing these relationships are not well characterized. This is due, in part to the fact that current taxonomic approaches for recognizing diversity in lichen symbionts commonly fail to accurately reflect actual species diversity. In this study, we employed DNA-based approaches to circumscribed candidate species-level lineages in rock-posy lichen symbionts (mycobiont=Rhizoplaca s. lat. species; photobiont=Trebouxia species). Our results revealed a high degree of cryptic diversity in both the myco- and photobionts in these lichens. Using the candidate species circumscribed here, we investigated the specificity of the symbionts toward their partners and inferred the relative importance of various factors influencing symbiont interactions. Distinct mycobiont species complexes, ecozones, and biomes are significantly correlated with the occurrence of photobiont OTUs, indicating that complex interactions among mycobiont lineages, ecogeography, and microhabitat determine interactions between photobionts and their mycobionts in lichen symbiosis. One-to-one specificity between mycobiont and photobiont species was not found, with the exception of R. maheui that associated with a single Trebouxia OTU that was not found with other Rhizoplaca s. lat. species. We estimated the most recent common ancestor of the core Rhizoplaca group at c. 62.5Ma, similar in age to the diverse parmelioid core group in the well-studied family Parmeliaceae. However, in contrast to Parmeliaceae, species in Rhizoplaca were found to associate with a narrow range of photobionts. Our study provides important perspectives into species diversity and interactions in iconic lichen symbiotic systems and establishes a

  13. Mixed signals? Morphological and molecular evidence suggest a color polymorphism in some neotropical polythore damselflies.

    Directory of Open Access Journals (Sweden)

    Melissa Sánchez Herrera

    Full Text Available The study of color polymorphisms (CP has provided profound insights into the maintenance of genetic variation in natural populations. We here offer the first evidence for an elaborate wing polymorphism in the Neotropical damselfly genus Polythore, which consists of 21 described species, distributed along the eastern slopes of the Andes in South America. These damselflies display highly complex wing colors and patterning, incorporating black, white, yellow, and orange in multiple wing bands. Wing colors, along with some components of the male genitalia, have been the primary characters used in species description; few other morphological traits vary within the group, and so there are few useful diagnostic characters. Previous research has indicated the possibility of a cryptic species existing in P. procera in Colombia, despite there being no significant differences in wing color and pattern between the populations of the two putative species. Here we analyze the complexity and diversity of wing color patterns of individuals from five described Polythore species in the Central Amazon Basin of Peru using a novel suite of morphological analyses to quantify wing color and pattern: geometric morphometrics, chromaticity analysis, and Gabor wavelet transformation. We then test whether these color patterns are good predictors of species by recovering the phylogenetic relationships among the 5 species using the barcode gene (COI. Our results suggest that, while highly distinct and discrete wing patterns exist in Polythore, these "wingforms" do not represent monophyletic clades in the recovered topology. The wingforms identified as P. victoria and P. ornata are both involved in a polymorphism with P. neopicta; also, cryptic speciation may have taking place among individuals with the P. victoria wingform. Only P. aurora and P. spateri represent monophyletic species with a single wingform in our molecular phylogeny. We discuss the implications of this

  14. Edge and corner detection by color invariants

    Science.gov (United States)

    Chu, Jun; Miao, Jun; Zhang, Guimei; Wang, Lu

    2013-02-01

    Gray-based features are widely used in computer vision applications, while image color is a very important source, which can provide more feature information. To fully exploit color data, a color saturation invariant based on dichromatic reflection model is first constructed. The invariant is an object reflectance property independent of viewpoint and illumination direction. The saturation invariant is then synthesized with existing hue invariant to detect edge and corner features in color image. Experiments show that the detection method proposed here can more effectively tap into color information and achieve true target features due to its lower sensitivity to shadow, shading and highlight. Moreover, when comparing with many other existing edges and corners detecting methods, experimental results demonstrate that the proposed method performs better in detection accurate and effective.

  15. Coloring night vision imagery for depth perception

    Institute of Scientific and Technical Information of China (English)

    Xiaojing Gu; Shaoyuan Sun; Jian'an Fang

    2009-01-01

    Depth perception for night vision(NV)imagery could largely improve scene comprehension.We present a novel scheme to give fused multi-band NV imagery smoothly natural color appearance as well as depth sense from color.Our approach is based on simulating color cues by varying saturation values of each object in the color NV image,in correspondence with the ratio between the infrared and low-light-level sensor outputs which in practice is the depth feature for same materials.We render the NV image segment-by-segment by taking advantage of image segmentation,dominant color transfer,saturation variation,and image fusion.Experiments have shown that the proposed scheme can achieve satisfying results.

  16. Identification of the MEAM1 cryptic species of Bemisia tabaci (Hemiptera: Aleyrodidae) by loop-mediated isothermal amplification

    Science.gov (United States)

    There are two major invasive cryptic species within the Bemisia tabaci cryptic species complex in Florida, called MEAM1 or biotype B, and MED or biotype Q. We used loop-mediated isothermal amplification of DNA to detect these groups. Primer sets developed in house and those previously published wer...

  17. Botrytis californica, a new cryptic species in the B. cinerea species complex causing gray mold in blueberries and table grapes

    Science.gov (United States)

    Botrytis cinerea consists of two cryptic species, referred to as Group I and Group II based on Bc-hch gene RFLP haplotyping, and Group I has been described as a new cryptic species B. pseudocinerea. During a survey for Botrytis spp. causing gray mold in blueberries and table grapes in the Central Va...

  18. Cryptic exon incorporation occurs in Alzheimer's brain lacking TDP-43 inclusion but exhibiting nuclear clearance of TDP-43.

    Science.gov (United States)

    Sun, Mingkuan; Bell, William; LaClair, Katherine D; Ling, Jonathan P; Han, Heather; Kageyama, Yusuke; Pletnikova, Olga; Troncoso, Juan C; Wong, Philip C; Chen, Liam L

    2017-06-01

    Abnormal accumulation of TDP-43 into cytoplasmic or nuclear inclusions with accompanying nuclear clearance, a common pathology initially identified in amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), has also been found in Alzheimer' disease (AD). TDP-43 serves as a splicing repressor of nonconserved cryptic exons and that such function is compromised in brains of ALS and FTD patients, suggesting that nuclear clearance of TDP-43 underlies its inability to repress cryptic exons. However, whether TDP-43 cytoplasmic aggregates are a prerequisite for the incorporation of cryptic exons is not known. Here, we assessed hippocampal tissues from 34 human postmortem brains including cases with confirmed diagnosis of AD neuropathologic changes along with age-matched controls. We found that cryptic exon incorporation occurred in all AD cases exhibiting TDP-43 pathology. Furthermore, incorporation of cryptic exons was observed in the hippocampus when TDP-43 inclusions was restricted only to the amygdala, the earliest stage of TDP-43 progression. Importantly, cryptic exon incorporation could be detected in AD brains lacking TDP-43 inclusion but exhibiting nuclear clearance of TDP-43. These data supports the notion that the functional consequence of nuclear depletion of TDP-43 as determined by cryptic exon incorporation likely occurs as an early event of TDP-43 proteinopathy and may have greater contribution to the pathogenesis of AD than currently appreciated. Early detection and effective repression of cryptic exons in AD patients may offer important diagnostic and therapeutic implications for this devastating illness of the elderly.

  19. Cryptic female exaggeration: the asymmetric female internal genitalia of Kaliana yuruani (Araneae: Pholcidae).

    Science.gov (United States)

    Huber, Bernhard A

    2006-06-01

    Males of the Venezuelan pholcid spider Kaliana yuruani have unique genitalia, with the procursi about six times as long as usual in the family. The present article describes the previously unknown female, searching for a morphological correlate in the female genitalia to the male's exaggeration. Reconstruction of histological serial sections reveals an internal female complexity that is unequalled in pholcid spiders. An intricate system of ducts and folds is arranged in an asymmetric way, making this the third known case of genital asymmetry in spiders. The term "cryptic female exaggeration" is used in analogy to cryptic female choice, pointing to the fact that from the outside, the female genitalia do not appear unusual. I propose that cryptic female exaggeration may be relatively common in copulatory structures if male exaggerations need to be evaluated according to the female choice by mechanical fit model. Finally, the evolution of genital asymmetry in spiders is contrasted with that in insects.

  20. Metabolism of Cryptic Peptides Derived from Neuropeptide FF Precursors: The Involvement of Insulin-Degrading Enzyme

    Directory of Open Access Journals (Sweden)

    Giuseppe Grasso

    2014-09-01

    Full Text Available The term “cryptome” refers to the subset of cryptic peptides with bioactivities that are often unpredictable and very different from the parent protein. These cryptic peptides are generated by proteolytic cleavage of proteases, whose identification in vivo can be very challenging. In this work, we show that insulin-degrading enzyme (IDE is able to degrade specific amino acid sequences present in the neuropeptide pro-NPFFA (NPFF precursor, generating some cryptic peptides that are also observed after incubation with rat brain cortex homogenate. The reported experimental findings support the increasingly accredited hypothesis, according to which, due to its wide substrate selectivity, IDE is involved in a wide variety of physiopathological processes.

  1. A distinct translation initiation mechanism generates cryptic peptides for immune surveillance.

    Directory of Open Access Journals (Sweden)

    Shelley R Starck

    Full Text Available MHC class I molecules present a comprehensive mixture of peptides on the cell surface for immune surveillance. The peptides represent the intracellular protein milieu produced by translation of endogenous mRNAs. Unexpectedly, the peptides are encoded not only in conventional AUG initiated translational reading frames but also in alternative cryptic reading frames. Here, we analyzed how ribosomes recognize and use cryptic initiation codons in the mRNA. We find that translation initiation complexes assemble at non-AUG codons but differ from canonical AUG initiation in response to specific inhibitors acting within the peptidyl transferase and decoding centers of the ribosome. Thus, cryptic translation at non-AUG start codons can utilize a distinct initiation mechanism which could be differentially regulated to provide peptides for immune surveillance.

  2. Features of cryptic promoters and their varied reliance on bromodomain-containing factors.

    Directory of Open Access Journals (Sweden)

    Samantha G Pattenden

    Full Text Available The Set2-Rpd3S pathway is important for the control of transcription memory. Mutation of components of this pathway results in cryptic transcription initiation within the coding region of approximately 30% of yeast genes. Specifically, deletion of the Set2 histone methyltransferase or Rco1, a component of the Rpd3S histone deacetylase complex leads to hyperacetylation of certain open reading frames (ORFs. We used this mutant as a system to study the role of histone modifications and co-activator recruitment in preinitiation complex (PIC formation. Specifically, we looked at the dependence of promoters on the bromodomain-containing RSC complex and the Bdf1 protein. We found that the dependence of cryptic promoters for these proteins varied. Overall, our data indicate that cryptic promoters are independently regulated, and their activation is dependent on factors that govern gene activation at canonical promoters.

  3. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... lentes de contacto de color Sep. 26, 2013 It started as an impulsive buy from a souvenir ... Can Ruin Vision Eye Makeup Safety In fact, it is illegal to sell colored contact lenses without ...

  4. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... colored contact lenses , from the U.S. Food and Drug Administration (FDA). Are the colored lenses you are ... from dry eye now have a completely new, drug-free alternative to lubricating eye drops and topical ...

  5. Color chiral solitons

    CERN Document Server

    Novozhilov, V Yu; Novozhilov, Victor; Novozhilov, Yuri

    2002-01-01

    We discuss specific features of color chiral solitons (asymptotics, possibility of confainment, quantization) at example of isolated SU(2) color skyrmions, i.e. skyrmions in a background field which is the vacuum field forming the gluon condensate.

  6. Color vision: retinal blues.

    Science.gov (United States)

    Johnston, Jamie; Esposti, Federico; Lagnado, Leon

    2012-08-21

    Two complementary studies have resolved the circuitry underlying green-blue color discrimination in the retina. A blue-sensitive interneuron provides the inhibitory signal required for computing green-blue color opponency.

  7. Colors Can Affect Us!

    Institute of Scientific and Technical Information of China (English)

    张俊斌

    2006-01-01

    Different colors affect us differently.The following will show us how they work. Experiment proves that math problems worked on yellow paper have fewer mistakes than problems written on other colors of paper.

  8. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... Vision and Daily Eye Drops After One Use Facts About Colored Contacts and Halloween Safety Colored Contact Lens Facts Over-the-Counter Costume Contacts May Contain Chemicals ...

  9. Dichromatic color language: "reds" and "greens" don't look alike but their colors do.

    Science.gov (United States)

    Jameson, D; Hurvich, L M

    1978-06-01

    When protanopes or deuteranopes arrange the Farnsworth Dichotomous Test colors in order of similarity, they reveal their lack of red/green hue discriminations by alternating chips that the normal trichromat sees as reddish and greenish test colors. The dichromatic orderings follow a systematic variation in saturation of blue hues through neutral and into yellow hues as described by theory for each of the two types. Some dichromats who show the typical test behavior nevertheless use reddish and greenish hue terms appropriately when instructed to name the same test colors. Lightness cues are probably used by these dichromats in the naming task but ignored in the perceptual similarity task. Thus, unlike normal trichromats, who use similar names for perceptually similar colors, dichromats may use dissimilar names for perceptually similar colors. In this way they can achieve concordance with the normative language system despite its discordance with their impoverished color perceptions.

  10. Diversity and environmental relations of cryptic, systemic Botrytis infections in symptomless hosts.

    Directory of Open Access Journals (Sweden)

    Michael W. Shaw

    2016-05-01

    Full Text Available Botrytis species are generally considered to be aggressive, necrotrophic plant pathogens. By contrast to this general perception, however, Botrytis species could frequently be isolated from the interior of multiple tissues in apparently healthy hosts of many species. Infection frequencies reached 50% of samples or more, but were commonly less, and cryptic infections were rare or absent in some plant species. Prevalence varied substantially from year to year and from tissue to tissue, but some host species routinely had high prevalence. The same genotype was found to occur throughout a host, representing mycelial spread. B. cinerea and B. pseudocinerea are the species that most commonly occur as cryptic infections, but phylogenetically distant isolates of Botrytis were also detected, one of which does not correspond to previously described species. Sporulation and visible damage occurred only when infected tissues were stressed, or became mature or senescent. There was no evidence of cryptic infection having a deleterious effect on growth of the host, and prevalence was probably greater in plants grown in high light conditions. Isolates from cryptic infections were often capable of causing disease (to varying extents when spore suspensions were inoculated onto their own host as well as on distinct host species, arguing against co-adaptation between cryptic isolates and their hosts. These data collectively suggest that several Botrytis species, including the most notorious pathogenic species, exist frequently in cryptic form to an extent that has thus far largely been neglected, and do not need to cause disease on healthy hosts in order to complete their life-cycles.

  11. Extensive cryptic splicing upon loss of RBM17 and TDP43 in neurodegeneration models.

    Science.gov (United States)

    Tan, Qiumin; Yalamanchili, Hari Krishna; Park, Jeehye; De Maio, Antonia; Lu, Hsiang-Chih; Wan, Ying-Wooi; White, Joshua J; Bondar, Vitaliy V; Sayegh, Layal S; Liu, Xiuyun; Gao, Yan; Sillitoe, Roy V; Orr, Harry T; Liu, Zhandong; Zoghbi, Huda Y

    2016-12-01

    Splicing regulation is an important step of post-transcriptional gene regulation. It is a highly dynamic process orchestrated by RNA-binding proteins (RBPs). RBP dysfunction and global splicing dysregulation have been implicated in many human diseases, but the in vivo functions of most RBPs and the splicing outcome upon their loss remain largely unexplored. Here we report that constitutive deletion of Rbm17, which encodes an RBP with a putative role in splicing, causes early embryonic lethality in mice and that its loss in Purkinje neurons leads to rapid degeneration. Transcriptome profiling of Rbm17-deficient and control neurons and subsequent splicing analyses using CrypSplice, a new computational method that we developed, revealed that more than half of RBM17-dependent splicing changes are cryptic. Importantly, RBM17 represses cryptic splicing of genes that likely contribute to motor coordination and cell survival. This finding prompted us to re-analyze published datasets from a recent report on TDP-43, an RBP implicated in amyotrophic lateral sclerosis (ALS) and frontotemporal dementia (FTD), as it was demonstrated that TDP-43 represses cryptic exon splicing to promote cell survival. We uncovered a large number of TDP-43-dependent splicing defects that were not previously discovered, revealing that TDP-43 extensively regulates cryptic splicing. Moreover, we found a significant overlap in genes that undergo both RBM17- and TDP-43-dependent cryptic splicing repression, many of which are associated with survival. We propose that repression of cryptic splicing by RBPs is critical for neuronal health and survival. CrypSplice is available at www.liuzlab.org/CrypSplice. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  12. Risk of Gonadoblastoma Development in Patients with Turner Syndrome with Cryptic Y Chromosome Material.

    Science.gov (United States)

    Kwon, Ahreum; Hyun, Sei Eun; Jung, Mo Kyung; Chae, Hyun Wook; Lee, Woo Jung; Kim, Tae Hyuk; Kim, Duk Hee; Kim, Ho-Seong

    2017-06-01

    Current guidelines recommend that testing for Y chromosome material should be performed only in patients with Turner syndrome harboring a marker chromosome and exhibiting virilization in order to detect individuals who are at high risk of gonadoblastoma. However, cryptic Y chromosome material is suggested to be a risk factor for gonadoblastoma in patients with Turner syndrome. Here, we aimed to estimate the frequency of cryptic Y chromosome material in patients with Turner syndrome and determine whether Y chromosome material increased the risk for development of gonadoblastoma. A total of 124 patients who were diagnosed with Turner syndrome by conventional cytogenetic techniques underwent additional molecular analysis to detect cryptic Y chromosome material. In addition, patients with Turner syndrome harboring Y chromosome cell lines had their ovaries removed prophylactically. Finally, we assessed the occurrence of gonadoblastoma in patients with Turner syndrome. Molecular analysis demonstrated that 10 patients had Y chromosome material among 118 patients without overt Y chromosome (8.5%). Six patients with overt Y chromosome and four patients with cryptic Y chromosome material underwent oophorectomy. Histopathological analysis revealed that the occurrence of gonadoblastoma in the total group was 2.4%, and gonadoblastoma occurred in one of six patients with an overt Y chromosome (16.7%) and 2 of 10 patients with cryptic Y chromosome material (20.0%). The risk of developing gonadoblastoma in patients with cryptic Y chromosome material was similar to that in patients with overt Y chromosome. Therefore, molecular screening for Y chromosome material should be recommended for all patients with Turner syndrome to detect individuals at a high risk of gonadoblastoma and to facilitate proper management of the disease.

  13. Achieving Standardization

    DEFF Research Database (Denmark)

    Henningsson, Stefan

    2014-01-01

    competitive, national customs and regional economic organizations are seeking to establish a standardized solution for digital reporting of customs data. However, standardization has proven hard to achieve in the socio-technical e-Customs solution. In this chapter, the authors identify and describe what has...

  14. Achieving Standardization

    DEFF Research Database (Denmark)

    Henningsson, Stefan

    2016-01-01

    competitive, national customs and regional economic organizations are seeking to establish a standardized solution for digital reporting of customs data. However, standardization has proven hard to achieve in the socio-technical e-Customs solution. In this chapter, the authors identify and describe what has...

  15. Achieving professionalism

    Directory of Open Access Journals (Sweden)

    R.A.E. Thompson

    1983-09-01

    Full Text Available In approaching the subject of professionalism the author has chosen to focus on the practical aspects rather than the philosophical issues. In so doing an attempt is made to identify criteria which demonstrate the achievement of the essence of professionalism.

  16. Measurement of Color Texture

    NARCIS (Netherlands)

    Hoang, M.A.; Geusebroek, J.M.; Chantler, M.

    2002-01-01

    In computer vision, measurement of image properties such as color or texture is essential. In this paper, we propose a solid framework for the local measurement of texture in color images. We give a physical basis for the integration of the well-known Gabor filters with the measurement of color. Our

  17. Reimagining the Color Wheel

    Science.gov (United States)

    Snyder, Jennifer

    2011-01-01

    Color wheels are a traditional project for many teachers. The author has used them in art appreciation classes for many years, but one problem she found when her pre-service art education students created colored wheels was that they were boring: simple circles, with pie-shaped pieces, which students either painted or colored in. This article…

  18. High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species

    DEFF Research Database (Denmark)

    Razgour, Orly; Clare, Elizabeth L.; Zeale, Matt R. K.

    2011-01-01

    Sympatric cryptic species, characterized by low morphological differentiation, pose a challenge to understanding the role of interspecific competition in structuring ecological communities. We used traditional (morphological) and novel molecular methods of diet analysis to study the diet of two...... of the cryptic bats, 60% of which were assigned to a likely species or genus. The findings from the molecular study supported the results of microscopic analyses in showing that the diets of both species were dominated by lepidopterans. However, HTS provided a sufficiently high resolution of prey identification...

  19. Evaluation of the accuracy and limitations of three tooth-color measuring machines

    Directory of Open Access Journals (Sweden)

    Jiun-Yao Chang

    2015-03-01

    Conclusion: By knowing the limits of each machine after being analyzed with the Munsell Book of Color, we can use the color measuring instrument in the specific color space range that the devices measuring accuracy performs the best in to achieve objective and accurate tooth-color measuring results in routine dental practice.

  20. Preserving city color plan, surveying Iranian submontane cities

    Directory of Open Access Journals (Sweden)

    Preserving city color plan, surveying Iranian submontane cities

    2015-06-01

    Full Text Available No Considering color pallet of the buildings of every city, arouse a debate related to identity and aesthetics of urban environment. This debate is succeeded by researches about the color of cities, from limited hues of traditional city to numerous colors of modern city. The French Lenclos was the first one who after dedicating many years to the color subject, innovated a method of surveying color of cities; which is used by anyone who is researching in this field. This article after mentioning Lenclos’ method of surveying color plan of cities, represents author’s case study in color pallet of Fuman. Author’s method in this case study is a combination of digital photography and photo shop software along with Lenclos’ method. Results (shown in a bar chart confirm that although traditional color pallet of the city is still dominant, but it has some differences with citizens’ opinion achieved by interviews and questionnaires.

  1. Adaptive Color Calibration Based One-Shot Structured Light System

    Directory of Open Access Journals (Sweden)

    Jie Yuan

    2012-08-01

    Full Text Available In one-shot color structured light systems, the color of stripe patterns are typically distorted with respect to color crosstalk, ambient light and the albedo of the scanned objects, leading to mismatch in the correspondence of color stripes between the projected and captured images. In this paper, an adaptive color calibration and Discrete Trend Transform algorithm are presented to achieve high-resolution 3D reconstructions. The adaptive color calibration, according to the relative albedo in RGB channels, can improve the accuracy of labeling stripe by alleviating the effect of albedo and ambient light while decoding the color. Furthermore, the Discrete Trend Transform in the M channel makes the color calibration an effective method for detecting weak stripes due to the uneven surfaces or reflectance characteristics of the scanned objects. With this approach, the presented system is suitable for scanning moving objects and generating high-resolution 3D reconstructions without the need of dark laboratory environments.

  2. Adaptive color calibration based one-shot structured light system.

    Science.gov (United States)

    Zhou, Yu; Zhao, Dongwei; Yu, Yao; Yuan, Jie; Du, Sidan

    2012-01-01

    In one-shot color structured light systems, the color of stripe patterns are typically distorted with respect to color crosstalk, ambient light and the albedo of the scanned objects, leading to mismatch in the correspondence of color stripes between the projected and captured images. In this paper, an adaptive color calibration and Discrete Trend Transform algorithm are presented to achieve high-resolution 3D reconstructions. The adaptive color calibration, according to the relative albedo in RGB channels, can improve the accuracy of labeling stripe by alleviating the effect of albedo and ambient light while decoding the color. Furthermore, the Discrete Trend Transform in the M channel makes the color calibration an effective method for detecting weak stripes due to the uneven surfaces or reflectance characteristics of the scanned objects. With this approach, the presented system is suitable for scanning moving objects and generating high-resolution 3D reconstructions without the need of dark laboratory environments.

  3. An Analysis of Predator Selection to Affect Aposematic Coloration in a Poison Frog Species.

    Directory of Open Access Journals (Sweden)

    Corinna E Dreher

    Full Text Available Natural selection is widely noted to drive divergence of phenotypic traits. Predation pressure can facilitate morphological divergence, for example the evolution of both cryptic and conspicuous coloration in animals. In this context Dendrobatid frogs have been used to study evolutionary forces inducing diversity in protective coloration. The polytypic strawberry poison frog (Oophaga pumilio shows strong divergence in aposematic coloration among populations. To investigate whether predation pressure is important for color divergence among populations of O. pumilio we selected four mainland populations and two island populations from Costa Rica and Panama. Spectrometric measurements of body coloration were used to calculate color and brightness contrasts of frogs as an indicator of conspicuousness for the visual systems of several potential predators (avian, crab and snake and a conspecific observer. Additionally, we conducted experiments using clay model frogs of different coloration to investigate whether the local coloration of frogs is better protected than non-local color morphs, and if predator communities vary among populations. Overall predation risk differed strongly among populations and interestingly was higher on the two island populations. Imprints on clay models indicated that birds are the main predators while attacks of other predators were rare. Furthermore, clay models of local coloration were equally likely to be attacked as those of non-local coloration. Overall conspicuousness (and brightness contrast of local frogs was positively correlated with attack rates by birds across populations. Together with results from earlier studies we conclude that conspicuousness honestly indicates toxicity to avian predators. The different coloration patterns among populations of strawberry poison frogs in combination with behavior and toxicity might integrate into equally efficient anti-predator strategies depending on local predation and

  4. An Analysis of Predator Selection to Affect Aposematic Coloration in a Poison Frog Species.

    Science.gov (United States)

    Dreher, Corinna E; Cummings, Molly E; Pröhl, Heike

    2015-01-01

    Natural selection is widely noted to drive divergence of phenotypic traits. Predation pressure can facilitate morphological divergence, for example the evolution of both cryptic and conspicuous coloration in animals. In this context Dendrobatid frogs have been used to study evolutionary forces inducing diversity in protective coloration. The polytypic strawberry poison frog (Oophaga pumilio) shows strong divergence in aposematic coloration among populations. To investigate whether predation pressure is important for color divergence among populations of O. pumilio we selected four mainland populations and two island populations from Costa Rica and Panama. Spectrometric measurements of body coloration were used to calculate color and brightness contrasts of frogs as an indicator of conspicuousness for the visual systems of several potential predators (avian, crab and snake) and a conspecific observer. Additionally, we conducted experiments using clay model frogs of different coloration to investigate whether the local coloration of frogs is better protected than non-local color morphs, and if predator communities vary among populations. Overall predation risk differed strongly among populations and interestingly was higher on the two island populations. Imprints on clay models indicated that birds are the main predators while attacks of other predators were rare. Furthermore, clay models of local coloration were equally likely to be attacked as those of non-local coloration. Overall conspicuousness (and brightness contrast) of local frogs was positively correlated with attack rates by birds across populations. Together with results from earlier studies we conclude that conspicuousness honestly indicates toxicity to avian predators. The different coloration patterns among populations of strawberry poison frogs in combination with behavior and toxicity might integrate into equally efficient anti-predator strategies depending on local predation and other ecological

  5. Reflective color STN-LCD technologies

    Science.gov (United States)

    Fujita, Shingo; Yamaguchi, Hisanori; Mizuno, Hiroaki; Ohtani, Toshiya; Sekime, Tomoaki; Hatanaka, Takayuki; Ogawa, Tetsu

    1998-04-01

    Reflective color STN-LCDs should be one of the most promising devices for mobile business tools (MBT), because the demand such as low cost, low power consumption, light weight and compact size is especially strong for this application. A reflective color STN-LCD with a single polarizer and double retardation films has been investigated. The double retardation films arranged in front of LC-layer enabled the LCD to contain reflective electrodes inside the panel. This configuration achieves the bright image with no parallax. A new construction of a reflective STN-LCD with a single polarizer has been decided by means of our own method in which the color difference (Delta) E* as the optimizing parameter has been used. Further, RGB color filters has been newly designed for our reflective LCD, and the aluminum (Al) layer has been introduced as reflective electrodes. As a result, we have realized 7.8-in.-diagonal refractive color STN-LCD(640 by 480) which has 15% reflectance, 1:14 contrast ratio, 4096 color capability and the sufficient color gamut. It has been confirmed that the single polarizer reflective color STN-LCD has sufficient enough performance for MBT use. We believe that it will be a key device for this application.

  6. Dynamic Color Displays Using Stepwise Cavity Resonators.

    Science.gov (United States)

    Chen, Yiqin; Duan, Xiaoyang; Matuschek, Marcus; Zhou, Yanming; Neubrech, Frank; Duan, Huigao; Liu, Na

    2017-09-13

    High-resolution multicolor printing based on pixelated optical nanostructures is of great importance for promoting advances in color display science. So far, most of the work in this field has been focused on achieving static colors, limiting many potential applications. This inevitably calls for the development of dynamic color displays with advanced and innovative functionalities. In this Letter, we demonstrate a novel dynamic color printing scheme using magnesium-based pixelated Fabry-Pérot cavities by gray scale nanolithography. With controlled hydrogenation and dehydrogenation, magnesium undergoes unique metal and dielectric transitions, enabling distinct blank and color states from the pixelated Fabry-Pérot resonators. Following such a scheme, we first demonstrate dynamic Ishihara plates, in which the encrypted images can only be read out using hydrogen as information decoding key. We also demonstrate a new type of dynamic color generation, which enables fascinating transformations between black/white printing and color printing with fine tonal tuning. Our work will find wide-ranging applications in full-color printing and displays, colorimetric sensing, information encryption and anticounterfeiting.

  7. Color prediction in textile application

    Science.gov (United States)

    De Lucia, Maurizio; Buonopane, Massimo

    2004-09-01

    Nowadays production systems of fancy yarns for knits allow the creation of extremely complex products in which many effects are obtained by means of color alteration. Current production technique consists in defining type and quantity of fibers by making preliminary samples. This samples are then compared with a reference one. This comparison is based on operator experience. Many samples are required in order to achieve a sample similar to the reference one. This work requires time and then additional costs for a textile manufacturer. In addition, the methodology is subjective. Nowadays, spectrophotometers are the only devices that seem to be able to provide objective indications. They are based on a spectral analysis of the light reflected by the knit material. In this paper the study of a new method for color evaluation of a mix of wool fibers with different colors is presented. First of all fiber characterization were carried out through scattering and absorption coefficients using the Kubelka-Munk theory. Then the estimated color was compared with a reference item, in order to define conformity by means of objective parameters. Finally, theoretical characterization was compared with the measured quantity. This allowed estimation of prediction quality.

  8. Tanslation of Color Words

    Institute of Scientific and Technical Information of China (English)

    徐丹

    2009-01-01

    Being a minor part in the translation field,the translation of color words is far more complex than people may have imagined.Apart from the literal meaning of color words in the target language,there are other factors that affect the understanding.This paper mainly focuses on three main characteristics of color words that make the translation work difficult-color words'variations and combinations,rich symbolic meanings and culture differences.It also provides possible ways to deal with the prickly problem of finding equivalents,the complexity of transferring symbolic meanings and the subtle problem of crossing culture boundaries in translation of color words.

  9. Color of Meat and Poultry

    Science.gov (United States)

    ... or freezer, color changes are normal for fresh meat and poultry. 2. Does a change in color indicate spoilage? Change in color alone does not mean the product is spoiled. Color changes are normal for fresh ...

  10. Acquired color vision deficiency.

    Science.gov (United States)

    Simunovic, Matthew P

    2016-01-01

    Acquired color vision deficiency occurs as the result of ocular, neurologic, or systemic disease. A wide array of conditions may affect color vision, ranging from diseases of the ocular media through to pathology of the visual cortex. Traditionally, acquired color vision deficiency is considered a separate entity from congenital color vision deficiency, although emerging clinical and molecular genetic data would suggest a degree of overlap. We review the pathophysiology of acquired color vision deficiency, the data on its prevalence, theories for the preponderance of acquired S-mechanism (or tritan) deficiency, and discuss tests of color vision. We also briefly review the types of color vision deficiencies encountered in ocular disease, with an emphasis placed on larger or more detailed clinical investigations.

  11. The Pragmatic Functions and Cultural Differences of Color Words

    Institute of Scientific and Technical Information of China (English)

    陈俊屹

    2015-01-01

    Color relates to people very closely; with the development of society and culture, people’s understanding of color is not confided to the visual characteristics of color itself, besides, people give color cultural connotation and actual meanings. In language, the unique glamour that the color words demonstrate makes people regard them with special esteem. Color words describe colors of nature with different cultural implications. They have unique linguistic functions and symbolic connotations. Colors play an indispensable part in our life and it's an effective way to learn the different culture. There is an increase in mis-understanding and communicative barriers because of frequent cross-cultural communication. Chinese and English color words possess different cultural meanings and connotation due to the difference in customs and habits, history and traditions, religions and beliefs, geographic locations, national psychology and ways of thinking. Thus, it’s easy to make mistakes on understanding and comprehension. The methods used in the research procedure are like this: collect some representative color words both from Chinese and English and take them as samples, then make a comparison between cultural connotations. According to the comparison, make a summary about the differences of color words between China and England. This thesis brings a discussion of cultural differences between English and Chinese color words. Color words in learning English is very important. It can help us t make a better understanding of the culture difference of both nations, and achieve the effective cross-culture communication.

  12. Optically tunable plasmonic color filters

    Science.gov (United States)

    Liu, Y. J.; Si, G. Y.; Leong, E. S. P.; Wang, B.; Danner, A. J.; Yuan, X. C.; Teng, J. H.

    2012-04-01

    We fabricated sub-wavelength patterned gold plasmonic nanostructures on a quartz substrate through the focused ion beam (FIB) technique. The perforated gold film demonstrated optical transmission peaks in the visible range, which therefore can be used as a plasmonic color filter. Furthermore, by integrating a layer of photoresponsive liquid crystals (LCs) with the gold nanostructure to form a hybrid system, we observed a red-shift of transmission peak wavelength. More importantly, the peak intensity can be further enhanced more than 10% in transmittance due to the refractive index match of the media on both sides of it. By optically pumping the hybrid system using a UV light, nematic-isotropic phase transition of the LCs was achieved, thus changing the effective refractive index experienced by the impinging light. Due to the refractive index change, the transmission peak intensity was modulated accordingly. As a result, an optically tunable plasmonic color filter was achieved. This kind of color filters could be potentially applied to many applications, such as complementary metal-oxide-semiconductor (CMOS) image sensors, liquid crystal display devices, light emitting diodes, etc.

  13. Colors, colored overlays, and reading skills

    Directory of Open Access Journals (Sweden)

    Arcangelo eUccula

    2014-07-01

    Full Text Available In this article, we are concerned with the role of colors in reading written texts. It has been argued that colored overlays applied above written texts positively influence both reading fluency and reading speed. These effects would be particularly evident for those individuals affected by the so called Meares-Irlen syndrome, i.e. who experience eyestrain and/or visual distortions – e.g. color, shape or movement illusions – while reading. This condition would interest the 12-14% of the general population and up to the 46% of the dyslexic population. Thus, colored overlays have been largely employed as a remedy for some aspects of the difficulties in reading experienced by dyslexic individuals, as fluency and speed. Despite the wide use of colored overlays, how they exert their effects has not been made clear yet. Also, according to some researchers, the results supporting the efficacy of colored overlays as a tool for helping readers are at least controversial. Furthermore, the very nature of the Meares-Irlen syndrome has been questioned. Here we provide a concise, critical review of the literature.

  14. Color Reproduction with a Smartphone

    Science.gov (United States)

    Thoms, Lars-Jochen; Colicchia, Giuseppe; Girwidz, Raimund

    2013-01-01

    The world is full of colors. Most of the colors we see around us can be created on common digital displays simply by superposing light with three different wavelengths. However, no mixture of colors can produce a fully pure color identical to a spectral color. Using a smartphone, students can investigate the main features of primary color addition…

  15. Color Reproduction with a Smartphone

    Science.gov (United States)

    Thoms, Lars-Jochen; Colicchia, Giuseppe; Girwidz, Raimund

    2013-01-01

    The world is full of colors. Most of the colors we see around us can be created on common digital displays simply by superposing light with three different wavelengths. However, no mixture of colors can produce a fully pure color identical to a spectral color. Using a smartphone, students can investigate the main features of primary color addition…

  16. Cryptic speciation in the Acari: a function of species lifestyles or our ability to separate species?

    Science.gov (United States)

    There are approximately 55,000 described Acari species, accounting for almost half of all known Arachnida species, but total estimated Acari diversity is reckoned to be far greater. One important source of currently hidden Acari diversity is cryptic speciation, which poses challenges to taxonomists ...

  17. The evolution of alternative cryptic female choice strategies in age-structured populations.

    Science.gov (United States)

    Jones, Adam G

    2002-12-01

    Cryptic female choice is a potentially important aspect of the sexual selection process. According to the theory of sexual dialectics, postcopulation manipulation of relative male fertilization success can provide an avenue by which females can circumvent attempts by males to control female reproduction. Here I use stochastic models to investigate the evolution of cryptic female choice in populations with and without age structure. In populations without age structure, cryptic female choice will evolve only when (1) precopulatory mate choice by females is inefficient, (2) variation in male fitness is correlated with a trait upon which a female can base her choice of mates, and (3) the cost of multiple mating is not too high. In populations with age structure, similar conditions apply. However, selection sometimes favors females that employ alternative strategies of female choice at different ages. These results help to define the types of biological systems in which we should expect to see the evolution of cryptic female choice. They also illustrate that the evolution of choice strategies in females may be complex and may mirror in some important respects the evolution of alternative mating tactics in males.

  18. The effect of cryptic female choice on sex allocation in simultaneous hermaphrodites

    NARCIS (Netherlands)

    van Velzen, Ellen; Scharer, Lukas; Pen, Ido

    2009-01-01

    Sex allocation theory for simultaneous hermaphrodites has focused primarily on the effects of sperm competition, but the role of mate choice has so far been neglected. We present a model to study the coevolution of cryptic female choice and sex allocation in simultaneous hermaphrodites. We show that

  19. CHARACTERIZATION OF SINGLE-STRAND ORIGINS OF CRYPTIC ROLLING-CIRCLE PLASMIDS FROM BACILLUS-SUBTILIS

    NARCIS (Netherlands)

    MEIJER, WJJ; VENEMA, G; BRON, S

    1995-01-01

    In this paper we describe the isolation and characterization of single strand origins (SSOs) of several cryptic Bacillus subtilis plasmids which use the rolling-circle mechanism of replication, The plasmids used in this study involved pTA1015, pTA1020, pTA1030, pTA1040, pTA1050 and pTA1060, The SSO

  20. Restricted Gene Flow among Lineages of Thrips tabaci Supports Genetic Divergence Among Cryptic Species Groups

    Science.gov (United States)

    Jacobson, Alana L.; Nault, Brian A.; Vargo, Edward L.; Kennedy, George G.

    2016-01-01

    Knowledge of the relative influence of population- versus species-level genetic variation is important to understand patterns of phenotypic variation and ecological relationships that exist among and within morphologically indistinguishable cryptic species and subspecies. In the case of cryptic species groups that are pests, such knowledge is also essential for devising effective population management strategies. The globally important crop pest Thrips tabaci is a taxonomically difficult group of putatively cryptic species. This study examines population genetic structure of T. tabaci and reproductive isolation among lineages of this species complex using microsatellite markers and mitochondrial COI sequences. Overall, genetic structure supports T. tabaci as a cryptic species complex, although limited interbreeding occurs between different clonal groups from the same lineage as well as between individuals from different lineages. These results also provide evidence that thelytoky and arrhenotoky are not fixed phenotypes among members of different T. tabaci lineages that have been generally associated with either reproductive mode. Possible biological and ecological factors contributing to these observations are discussed. PMID:27690317

  1. Cryptic genetic variation can make "irreducible complexity" a common mode of adaptation in sexual populations.

    Science.gov (United States)

    Trotter, Meredith V; Weissman, Daniel B; Peterson, Grant I; Peck, Kayla M; Masel, Joanna

    2014-12-01

    The existence of complex (multiple-step) genetic adaptations that are "irreducible" (i.e., all partial combinations are less fit than the original genotype) is one of the longest standing problems in evolutionary biology. In standard genetics parlance, these adaptations require the crossing of a wide adaptive valley of deleterious intermediate stages. Here, we demonstrate, using a simple model, that evolution can cross wide valleys to produce "irreducibly complex" adaptations by making use of previously cryptic mutations. When revealed by an evolutionary capacitor, previously cryptic mutants have higher initial frequencies than do new mutations, bringing them closer to a valley-crossing saddle in allele frequency space. Moreover, simple combinatorics implies an enormous number of candidate combinations exist within available cryptic genetic variation. We model the dynamics of crossing of a wide adaptive valley after a capacitance event using both numerical simulations and analytical approximations. Although individual valley crossing events become less likely as valleys widen, by taking the combinatorics of genotype space into account, we see that revealing cryptic variation can cause the frequent evolution of complex adaptations.

  2. Multigene phylogeny and mating tests reveal three cryptic species related to Calonectria pauciramosa

    NARCIS (Netherlands)

    Lombard, L.; Crous, P.W.; Wingfield, B.D.; Wingfield, M.J.

    2010-01-01

    Calonectria pauciramosa is a pathogen of numerous plant hosts worldwide. Recent studies have indicated that it included cryptic species, some of which are identified in this study. Isolates from various geographical origins were collected and compared based on morphology, DNA sequence data of the

  3. Acoustic analysis reveals a new cryptic bush-cricket in the Carpathian Mountains (Orthoptera, Phaneropteridae).

    Science.gov (United States)

    Iorgu, Ionuţ Ştefan

    2012-01-01

    A new morphologically cryptic species of phaneropterid bush-cricket from the genus Isophya is described from the Eastern Carpathian Mountains: Isophya dochiasp. n. Sound analysis and morphological details are discussed in the paper comparing the new species with several Isophya species having similar morphology and acoustic behavior.

  4. Acoustic analysis reveals a new cryptic bush–cricket in the Carpathian Mountains (Orthoptera, Phaneropteridae

    Directory of Open Access Journals (Sweden)

    Ionut Iorgu

    2012-12-01

    Full Text Available A new morphologically cryptic species of phaneropterid bush–cricket from the genus Isophya is described from the Eastern Carpathian Mountains: Isophya dochia sp. n. Sound analysis and morphological details are discussed in the paper, comparing the new species with several Isophya speciessimilar morphology and acoustic behavior.

  5. Acoustic analysis reveals a new cryptic bush–cricket in the Carpathian Mountains (Orthoptera, Phaneropteridae)

    OpenAIRE

    Ionut Iorgu

    2012-01-01

    Abstract A new morphologically cryptic species of phaneropterid bush–cricket from the genus Isophya is described from the Eastern Carpathian Mountains: Isophya dochia sp. n. Sound analysis and morphological details are discussed in the paper comparing the new species with several Isophya species having similar morphology and acoustic behavior.

  6. A cryptic BAP1 splice mutation in a family with uveal and cutaneous melanoma, and paraganglioma

    DEFF Research Database (Denmark)

    Wadt, K.; Choi, J.; Chung, J.Y.;

    2012-01-01

    as paraganglioma, breast cancer, and suspected mesothelioma cases in the family. Bioinformatic analysis and splicing assays demonstrated that this mutation creates a strong cryptic splice donor, resulting in aberrant splicing and a truncating frameshift of the BAP1 transcript. Somatic loss of the wild-type allele...

  7. ACTIVATION OF A CRYPTIC D-SERINE DEAMINASE (DSD) GENE FROM PSEUDOMONAS CEPACIA 17616

    Science.gov (United States)

    D-serine inhibits growth of P. cepacia 17616; however, resistant mutants able to express an ordinarily cryptic D-serine deaminase (dsd) gene were isolated readily. The resistant strains formed high levels of a D-serine deaminase active on D-threonine as well as D-serine. IS eleme...

  8. A near-infrared spectroscopy routine for unambiguous identification of cryptic ant species

    Science.gov (United States)

    The identification of species – of importance for most biological disciplines – is not always straightforward as cryptic species present a hurdle for traditional species discrimination. Fibre-optic near-infrared spectroscopy (NIRS) is a rapid and cheap method for a wide range of different applicatio...

  9. Reflections on fourteen cryptic issues concerning the nature of statistical inference

    NARCIS (Netherlands)

    Kardaun, O.J.W.F.; Salomé, D.; Schaafsma, W; Steerneman, A.G.M.; Willems, J.C; Cox, D.R.

    2003-01-01

    The present paper provides the original formulation and a joint response of a group of statistically trained scientists to fourteen cryptic issues for discussion, which were handed out to the public by Professor Dr. D.R. Cox after his Bernoulli Lecture 1997 at Groningen University.

  10. Affective Image Colorization

    Institute of Scientific and Technical Information of China (English)

    Xiao-Hui Wang; Jia Jia; Han-Yu Liao; Lian-Hong Cai

    2012-01-01

    Colorization of gray-scale images has attracted many attentions for a long time.An important role of image color is the conveyer of emotions (through color themes).The colorization with an undesired color theme is less useful,even it is semantically correct.However this has been rarely considered.Automatic colorization respecting both the semantics and the emotions is undoubtedly a challenge.In this paper,we propose a complete system for affective image colorization.We only need the user to assist object segmentation along with text labels and an affective word.First,the text labels along with other object characters are jointly used to filter the internet images to give each object a set of semantically correct reference images.Second,we select a set of color themes according to the affective word based on art theories.With these themes,a generic algorithm is used to select the best reference for each object,balancing various requirements.Finally,we propose a hybrid texture synthesis approach for colorization.To the best of our knowledge,it is the first system which is able to efficiently colorize a gray-scale image semantically by an emotionally controllable fashion.Our experiments show the effectiveness of our system,especially the benefit compared with the previous Markov random field (MRF) based method.

  11. The nature of colors

    Science.gov (United States)

    da Pos, Osvaldo

    2002-06-01

    Color is a visible aspect of objects and lights, and as such is an objective characteristic of our phenomenal world. Correspondingly also objects and lights are objective, although their subjectivity cannot be disregarded since they belong to our phenomenal world. The distinction between perception and sensation deals with colors seen either in complex displays or in isolation. Reality of colors is apparently challenged by virtual reality, while virtual reality is a good example of what colors are. It seems difficult to combine that aspect of reality colors have in our experience and the concept that colors represent something in the external environment: the distinction between stimulation and perceived object is crucial for understanding the relationships between phenomenal world and physical reality. A modern concept of isomorphism seems useful in interpreting the role of colors. The relationship between the psychological structure of colors and the physical stimulation is enlightened by the analysis of pseudocolors. The perceptual, subjective characteristics of colors go along with the subjectivity of scientific concepts. Colors, emotions, and concepts are all in some people's mind: none of them is independent of the subject mind. Nevertheless they can be communicated from person to person by an appropriate scientific terminology.

  12. Selection of small color palette for color image quantization

    Science.gov (United States)

    Chau, Wing K.; Wong, S. K. M.; Yang, Xuedong; Wan, Shijie J.

    1992-05-01

    Two issues are involved in color image quantization: color palette selection and color mapping. A common practice for color palette selection is to minimize the color distortion for each pixel (the median-cut, the variance-based and the k-means algorithms). After the color palette has been chosen, a quantized image may be generated by mapping the original color of each pixel onto its nearest color in the color palette. Such an approach can usually produce quantized images of high quality with 128 or more colors. For 32 - 64 colors, the quality of the quantized images is often acceptable with the aid of dithering techniques in the color mapping process. For 8 - 16 color, however, the above statistical method for color selection becomes no longer suitable because of the great reduction of color gamut. In order to preserve the color gamut of the original image, one may want to select the colors in such a way that the convex hull formed by these colors in the RGB color space encloses most colors of the original image. Quantized images generated in such a geometrical way usually preserve a lot of image details, but may contain too much high frequency noises. This paper presents an effective algorithm for the selection of very small color palette by combining the strengths of the above statistical and geometrical approaches. We demonstrate that with the new method images of high quality can be produced by using only 4 to 8 colors.

  13. Codon optimization of the human papillomavirus E7 oncogene induces a CD8+ T cell response to a cryptic epitope not harbored by wild-type E7.

    Directory of Open Access Journals (Sweden)

    Felix K M Lorenz

    Full Text Available Codon optimization of nucleotide sequences is a widely used method to achieve high levels of transgene expression for basic and clinical research. Until now, immunological side effects have not been described. To trigger T cell responses against human papillomavirus, we incubated T cells with dendritic cells that were pulsed with RNA encoding the codon-optimized E7 oncogene. All T cell receptors isolated from responding T cell clones recognized target cells expressing the codon-optimized E7 gene but not the wild type E7 sequence. Epitope mapping revealed recognition of a cryptic epitope from the +3 alternative reading frame of codon-optimized E7, which is not encoded by the wild type E7 sequence. The introduction of a stop codon into the +3 alternative reading frame protected the transgene product from recognition by T cell receptor gene-modified T cells. This is the first experimental study demonstrating that codon optimization can render a transgene artificially immunogenic through generation of a dominant cryptic epitope. This finding may be of great importance for the clinical field of gene therapy to avoid rejection of gene-corrected cells and for the design of DNA- and RNA-based vaccines, where codon optimization may artificially add a strong immunogenic component to the vaccine.

  14. Targeting a Hidden Enemy: Pyriproxyfen Autodissemination Strategy for the Control of the Container Mosquito Aedes albopictus in Cryptic Habitats.

    Directory of Open Access Journals (Sweden)

    Kshitij Chandel

    2016-12-01

    Full Text Available The Asian tiger mosquito, Aedes albopictus, is a vector of dengue, Chikungunya, and Zika viruses. This mosquito inhabits a wide range of artificial water-holding containers in urban and suburban areas making it difficult to control. We tested the hypothesis that female-driven autodissemination of an insect growth regulator could penetrate cryptic oviposition habitats difficult to treat with conventional insecticidal sprays.Oviposition preferences of Ae. albopictus females for open and cryptic cups were tested in semi-field experiments. Two conventional larvicidal sprayers were tested to determine droplet penetration and larvicidal efficacy in open and cryptic habitats using Bacillus thuringiensis var. israelensis (Bti in the field. Finally, the efficacy of pyriproxyfen autodissemination stations was assessed in cryptic and open cups in residential areas during 2013 and 2014.Gravid females strongly preferred cryptic (53.1±12.9 eggs/cup over open (10.3±4.3 eggs/cup cups for oviposition. Cryptic cups showed limited droplet penetration and produced 0.1-0.3% larval mortality with a conventional backpack and low-volume sprays of Bti. The autodissemination stations effectively contaminated these cryptic cups (59.3-84.6% and produced 29.7-40.8% pupal mortality during 2013-2014. Significant pupal mortality was also observed in open cups.The autodissemination station effectively exploits the oviposition behavior of wild gravid females to deliver pyriproxyfen to targeted oviposition habitats. Although the pupal mortality in cryptic cups was relatively lower than expected for the effective vector control. Autodissemination approach may be a suitable supporting tool to manage Ae. albopictus immatures in the cryptic habitats those are less accessible to conventional larvicidal sprays.

  15. Targeting a Hidden Enemy: Pyriproxyfen Autodissemination Strategy for the Control of the Container Mosquito Aedes albopictus in Cryptic Habitats

    Science.gov (United States)

    Suman, Devi Shankar; Wang, Yi; Unlu, Isik; Williges, Eric; Williams, Gregory M.; Gaugler, Randy

    2016-01-01

    Background The Asian tiger mosquito, Aedes albopictus, is a vector of dengue, Chikungunya, and Zika viruses. This mosquito inhabits a wide range of artificial water-holding containers in urban and suburban areas making it difficult to control. We tested the hypothesis that female-driven autodissemination of an insect growth regulator could penetrate cryptic oviposition habitats difficult to treat with conventional insecticidal sprays. Methodology Oviposition preferences of Ae. albopictus females for open and cryptic cups were tested in semi-field experiments. Two conventional larvicidal sprayers were tested to determine droplet penetration and larvicidal efficacy in open and cryptic habitats using Bacillus thuringiensis var. israelensis (Bti) in the field. Finally, the efficacy of pyriproxyfen autodissemination stations was assessed in cryptic and open cups in residential areas during 2013 and 2014. Principal Findings Gravid females strongly preferred cryptic (53.1±12.9 eggs/cup) over open (10.3±4.3 eggs/cup) cups for oviposition. Cryptic cups showed limited droplet penetration and produced 0.1–0.3% larval mortality with a conventional backpack and low-volume sprays of Bti. The autodissemination stations effectively contaminated these cryptic cups (59.3–84.6%) and produced 29.7–40.8% pupal mortality during 2013–2014. Significant pupal mortality was also observed in open cups. Conclusions The autodissemination station effectively exploits the oviposition behavior of wild gravid females to deliver pyriproxyfen to targeted oviposition habitats. Although the pupal mortality in cryptic cups was relatively lower than expected for the effective vector control. Autodissemination approach may be a suitable supporting tool to manage Ae. albopictus immatures in the cryptic habitats those are less accessible to conventional larvicidal sprays. PMID:28033379

  16. Physical Environment and Middle Grade Achievement.

    Science.gov (United States)

    Chan, Tak Cheung

    This study measured the influence of air conditioning, carpeting, fluorescent lighting, and interior pastel coloring on the academic achievement of eighth grade Georgia pupils in 1975-76 when the variance due to socioeconomic status was statistically controlled. Analysis of covariance was used to compare the achievement scores of students on the…

  17. The road coloring problem

    CERN Document Server

    Trahtman, A N

    2007-01-01

    The synchronizing word of deterministic automaton is a word in the alphabet of colors (considered as letters) of its edges that maps the automaton to a single state. A coloring of edges of a directed graph is synchronizing if the coloring turns the graph into deterministic finite automaton possessing a synchronizing word. The road coloring problem is a problem of synchronizing coloring of directed finite strongly connected graph with constant outdegree of all its vertices if the greatest common divisor of lengths of all its cycles is one. The problem was posed by Adler, Goodwyn and Weiss over 30 years ago and evoked a noticeable interest among the specialists in theory of graphs, deterministic automata and symbolic dynamics. The problem is described even in "Vikipedia" - the popular Internet Encyclopedia. The positive solution of the road coloring problem is presented.

  18. Laser color recording unit

    Science.gov (United States)

    Jung, E.

    1984-05-01

    A color recording unit was designed for output and control of digitized picture data within computer controlled reproduction and picture processing systems. In order to get a color proof picture of high quality similar to a color print, together with reduced time and material consumption, a photographic color film material was exposed pixelwise by modulated laser beams of three wavelengths for red, green and blue light. Components of different manufacturers for lasers, acousto-optic modulators and polygon mirrors were tested, also different recording methods as (continuous tone mode or screened mode and with a drum or flatbed recording principle). Besides the application for the graphic arts - the proof recorder CPR 403 with continuous tone color recording with a drum scanner - such a color hardcopy peripheral unit with large picture formats and high resolution can be used in medicine, communication, and satellite picture processing.

  19. Compressing Color Data for Voxelized Surface Geometry.

    Science.gov (United States)

    Dolonius, Dan; Sintorn, Erik; Kampe, Viktor; Assarsson, Ulf

    2017-08-18

    We explore the problem of decoupling color information from geometry in large scenes of voxelized surfaces and of compressing the array of colors without introducing disturbing artifacts. In this extension of our I3D paper with the same title, we first present a novel method for connecting each node in a sparse voxel DAG to its corresponding colors in a separate 1D array of colors, with very little additional information stored to the DAG. Then, we show that by mapping the 1D array of colors onto a 2D image using a space-filling curve, we can achieve high compression rates and good quality using conventional, modern, hardware-accelerated texture compression formats such as ASTC or BC7. We additionally explore whether this method can be used to compress voxel colors for off-line storage and network transmission using conventional off-line compression formats such as JPG and JPG2K. For real-time decompression, we suggest a novel variable bitrate block encoding that consistently outperforms previous work, often achieving two times the compression at equal quality.

  20. The Translation Of Colors

    Institute of Scientific and Technical Information of China (English)

    王冰

    2012-01-01

    Different nations have different or even opposite perception of color, which results in non-equivalence of color words in mutual translation between Chinese and English. This paper is to discuss non-equivalence of color words between Chinese and English on the two aspects and emphasizes the importance of transmitting cultural message accurately in the mutual translation between Chinese and English. Studying the cultural connotations of the words is of great importance for successful communication.

  1. Color fusion of SAR and FLIR images using a natural color transfer technique

    Institute of Scientific and Technical Information of China (English)

    Shaoyuan Sun; Zhongliang Jing; Zhenhua Li; Gang Liu

    2005-01-01

    Fusion of synthetic aperture radar (SAR) and forward looking infrared (FLIR) images is an important subject for aerospace and sensor surveillance. This paper presents a scheme to achieve a natural color image based on the contours feature of SAR and the target region feature of FLIR so that the overall scene recognition and situational awareness can be improved. The SAR and FLIR images are first decomposed into steerable pyramids, and the contour maps in the SAR image and the region maps in the FLIR image are calculated. The contour and region features are fused at each level of the steerable pyramids. A color image is then formed by transferring daytime color to the monochromic image by using the natural color transfer technique. Experimental results show that the proposed method is effective in providing a color fusion of SAR and FLIR images.

  2. Color sensing under microwaves

    Science.gov (United States)

    Choudhury, Debesh

    2013-09-01

    Inspired by recent results of artificial color due to Caulfield, we carry out intuitive experimental investigations on color sensing under microwave illumination. Experiemnts have been carried out using a Gunn diode as the microwave source and a microwave diode as a detector. More precise experimental studies have also been carried out utilizing a vector network analyzer. Preliminary results of the experiments validate the feasibility of sensing and discriminating otherwise visual colors under microwave illumination. Caulfield's presumption possibly paves the way for artificial color perception using microwaves.

  3. Natural color image segmentation using integrated mechanism

    Institute of Scientific and Technical Information of China (English)

    Jie Xu (徐杰); Pengfei Shi (施鹏飞)

    2003-01-01

    A new method for natural color image segmentation using integrated mechanism is proposed in this paper.Edges are first detected in term of the high phase congruency in the gray-level image. K-mean cluster is used to label long edge lines based on the global color information to estimate roughly the distribution of objects in the image, while short ones are merged based on their positions and local color differences to eliminate the negative affection caused by texture or other trivial features in image. Region growing technique is employed to achieve final segmentation results. The proposed method unifies edges, whole and local color distributions, as well as spatial information to solve the natural image segmentation problem.The feasibility and effectiveness of this method have been demonstrated by various experiments.

  4. A framework for interactive image color editing

    KAUST Repository

    Musialski, Przemyslaw

    2012-11-09

    We propose a new method for interactive image color replacement that creates smooth and naturally looking results with minimal user interaction. Our system expects as input a source image and rawly scribbled target color values and generates high quality results in interactive rates. To achieve this goal we introduce an algorithm that preserves pairwise distances of the signatures in the original image and simultaneously maps the color to the user defined target values. We propose efficient sub-sampling in order to reduce the computational load and adapt semi-supervised locally linear embedding to optimize the constraints in one objective function. We show the application of the algorithm on typical photographs and compare the results to other color replacement methods. © 2012 Springer-Verlag Berlin Heidelberg.

  5. Oral lesion classification using true-color images

    Science.gov (United States)

    Chodorowski, Artur; Mattsson, Ulf; Gustavsson, Tomas

    1999-05-01

    The aim of the study was to investigate effective image analysis methods for the discrimination of two oral lesions, oral lichenoid reactions and oral leukoplakia, using only color information. Five different color representations (RGB, Irg, HSI, I1I2I3 and La*b*) were studied and their use for color analysis of mucosal images evaluated. Four common classifiers (Fisher's linear discriminant, Gaussian quadratic, kNN-Nearest Neighbor and Multilayer Perceptron) were chosen for the evaluation of classification performance. The feature vector consisted of the mean color difference between abnormal and normal regions extracted from digital color images. Classification accuracy was estimated using resubstitution and 5-fold crossvalidation methods. The best classification results were achieved in HSI color system and using linear discriminant function. In total, 70 out of 74 (94.6%) lichenoid reactions and 14 out of 20 (70.0%) of leukoplakia were correctly classified using only color information.

  6. Encyclopedia of color science and technology

    CERN Document Server

    2016-01-01

    The Encyclopedia of Color Science and Technology provides an authoritative single source for understanding and applying the concepts of color to all fields of science and technology, including artistic and historical aspects of color. Many topics are discussed in this timely reference, including an introduction to the science of color, and entries on the physics, chemistry and perception of color. Color is described as it relates to optical phenomena of color and continues on through colorants and materials used to modulate color and also to human vision of color. The measurement of color is provided as is colorimetry, color spaces, color difference metrics, color appearance models, color order systems and cognitive color. Other topics discussed include industrial color, color imaging, capturing color, displaying color and printing color. Descriptions of color encodings, color management, processing color and applications relating to color synthesis for computer graphics are included in this work. The Encyclo...

  7. Black Twin Colors on Topographics Maps in Digital Print

    OpenAIRE

    Maja Matas; Vilko Žiljak

    2014-01-01

    Spot dyes join the double feature of the INFRAREDESIGN® theory. A large number of planned colors in graphics of topographic maps, are simulated in the press with only four process colorants. Achieved are seperated infromation for the visible and infrared spectrum. This introduces the protection of printed matter, protection of property, reduces the cost of spot printing of large numbers of layers. For the digital print technology simulation of the merge of "topographical colors" is extended t...

  8. A novel field method to distinguish between cryptic carcharhinid sharks, Australian blacktip shark Carcharhinus tilstoni and common blacktip shark C. limbatus, despite the presence of hybrids.

    Science.gov (United States)

    Johnson, G J; Buckworth, R C; Lee, H; Morgan, J A T; Ovenden, J R; McMahon, C R

    2017-01-01

    Multivariate and machine-learning methods were used to develop field identification techniques for two species of cryptic blacktip shark. From 112 specimens, precaudal vertebrae (PCV) counts and molecular analysis identified 95 Australian blacktip sharks Carcharhinus tilstoni and 17 common blacktip sharks Carcharhinus limbatus. Molecular analysis also revealed 27 of the 112 were C. tilstoni × C. limbatus hybrids, of which 23 had C. tilstoni PCV counts and four had C. limbatus PCV counts. In the absence of further information about hybrid phenotypes, hybrids were assigned as either C. limbatus or C. tilstoni based on PCV counts. Discriminant analysis achieved 80% successful identification, but machine-learning models were better, achieving 100% successful identification, using six key measurements (fork length, caudal-fin peduncle height, interdorsal space, second dorsal-fin height, pelvic-fin length and pelvic-fin midpoint to first dorsal-fin insertion). Furthermore, pelvic-fin markings could be used for identification: C. limbatus has a distinct black mark >3% of the total pelvic-fin area, while C. tilstoni has markings with diffuse edges, or has smaller or no markings. Machine learning and pelvic-fin marking identification methods were field tested achieving 87 and 90% successful identification, respectively. With further refinement, the techniques developed here will form an important part of a multi-faceted approach to identification of C. tilstoni and C. limbatus and have a clear management and conservation application to these commercially important sharks. The methods developed here are broadly applicable and can be used to resolve species identities in many fisheries where cryptic species exist.

  9. The Color of Lobsters

    NARCIS (Netherlands)

    Wijk, Arjan van

    2005-01-01

    Synthesis of 13C-enriched carotenoids. Carotenoids are natural colorants, ranging in color from pale yellow to deep purple, with important biological functions. Carotenoids in the human diet have a beneficial health effect, playing a role in the prevention of cardiovascular disease and cancer. To ge

  10. List coloring with requests

    OpenAIRE

    Dvořák, Zdeněk; Norin, Sergey; Postle, Luke

    2016-01-01

    Let G be a graph with a list assignment L. Suppose a preferred color is given for some of the vertices; how many of these preferences can be respected when L-coloring G? We explore several natural questions arising in this context, and propose directions for further research.

  11. Measurement of Color Texture

    NARCIS (Netherlands)

    Hoang, M.A.; Geusebroek, J.M.; Deprettere, E.F.; Belloum, A.; Heijnsdijk, J.W.J.; van der Stappen, F.

    2002-01-01

    In computer vision, measurement of image properties such as color or texture is essential. However, existing methods for measuring color and texture in combination are not well-defined neither from a measurement theoretical basis nor from a physical point of view. We propose a solid framework for th

  12. Plasmonic color tuning

    Science.gov (United States)

    Lee, Byoungho; Yun, Hansik; Lee, Seung-Yeol; Kim, Hwi

    2016-03-01

    In general, color filter is an optical component to permit the transmission of a specific color in cameras, displays, and microscopes. Each filter has its own unchangeable color because it is made by chemical materials such as dyes and pigments. Therefore, in order to express various colorful images in a display, one pixel should have three sub-pixels of red, green, and blue colors. Here, we suggest new plasmonic structure and method to change the color in a single pixel. It is comprised of a cavity and a metal nanoaperture. The optical cavity generally supports standing waves inside it, and various standing waves having different wavelength can be confined together in one cavity. On the other hand, although light cannot transmit sub-wavelength sized aperture, surface plasmons can propagate through the metal nanoaperture with high intensity due to the extraordinary transmission. If we combine the two structures, we can organize the spatial distribution of amplitudes according to wavelength of various standing waves using the cavity, and we can extract a light with specific wavelength and amplitude using the nanoaperture. Therefore, this cavity-aperture structure can simultaneously tune the color and intensity of the transmitted light through the single nanoaperture. We expect that the cavity-apertures have a potential for dynamic color pixels, micro-imaging system, and multiplexed sensors.

  13. The Color of Lobsters

    NARCIS (Netherlands)

    Wijk, Arjan van

    2005-01-01

    Synthesis of 13C-enriched carotenoids. Carotenoids are natural colorants, ranging in color from pale yellow to deep purple, with important biological functions. Carotenoids in the human diet have a beneficial health effect, playing a role in the prevention of cardiovascular disease and cancer. To ge

  14. 3-D Color Wheels

    Science.gov (United States)

    DuBois, Ann

    2010-01-01

    The blending of information from an academic class with projects from art class can do nothing but strengthen the learning power of the student. Creating three-dimensional color wheels provides the perfect opportunity to combine basic geometry knowledge with color theory. In this article, the author describes how her seventh-grade painting…

  15. Quorum Colorings of Graphs

    NARCIS (Netherlands)

    S.M. Heditniemi (Sandra); R.C. Laskar (R.C.); H.M. Mulder (Martyn)

    2012-01-01

    textabstractLet $G = (V,E)$ be a graph. A partition $\\pi = \\{V_1, V_2, \\ldots, V_k \\}$ of the vertices $V$ of $G$ into $k$ {\\it color classes} $V_i$, with $1 \\leq i \\leq k$, is called a {\\it quorum coloring} if for every vertex $v \\in V$, at least half of the vertices in the closed neighborhood

  16. Gauge color codes

    DEFF Research Database (Denmark)

    Bombin Palomo, Hector

    2015-01-01

    Color codes are topological stabilizer codes with unusual transversality properties. Here I show that their group of transversal gates is optimal and only depends on the spatial dimension, not the local geometry. I also introduce a generalized, subsystem version of color codes. In 3D they allow...

  17. Dynamic egg color mimicry.

    Science.gov (United States)

    Hanley, Daniel; Šulc, Michal; Brennan, Patricia L R; Hauber, Mark E; Grim, Tomáš; Honza, Marcel

    2016-06-01

    Evolutionary hypotheses regarding the function of eggshell phenotypes, from solar protection through mimicry, have implicitly assumed that eggshell appearance remains static throughout the laying and incubation periods. However, recent research demonstrates that egg coloration changes over relatively short, biologically relevant timescales. Here, we provide the first evidence that such changes impact brood parasite-host eggshell color mimicry during the incubation stage. First, we use long-term data to establish how rapidly the Acrocephalus arundinaceus Linnaeus (great reed warbler) responded to natural parasitic eggs laid by the Cuculus canorus Linnaeus (common cuckoo). Most hosts rejected parasitic eggs just prior to clutch completion, but the host response period extended well into incubation (~10 days after clutch completion). Using reflectance spectrometry and visual modeling, we demonstrate that eggshell coloration in the great reed warbler and its brood parasite, the common cuckoo, changes rapidly, and the extent of eggshell color mimicry shifts dynamically over the host response period. Specifically, 4 days after being laid, the host should notice achromatic color changes to both cuckoo and warbler eggs, while chromatic color changes would be noticeable after 8 days. Furthermore, we demonstrate that the perceived match between host and cuckoo eggshell color worsened over the incubation period. These findings have important implications for parasite-host coevolution dynamics, because host egg discrimination may be aided by disparate temporal color changes in host and parasite eggs.

  18. The Colored Jones Function

    Institute of Scientific and Technical Information of China (English)

    HAN You-fa; YAN Xin-ming; LV Li-li

    2012-01-01

    In this paper,we discuss the properties of the colored Jones function of knots.Particularly,we calculate the colored Jones function of some knots(31,41,51,52).Furthermore,one can compute the Kashaev's invariants and study some properties of the Kashaev's conjecture.

  19. 3-D Color Wheels

    Science.gov (United States)

    DuBois, Ann

    2010-01-01

    The blending of information from an academic class with projects from art class can do nothing but strengthen the learning power of the student. Creating three-dimensional color wheels provides the perfect opportunity to combine basic geometry knowledge with color theory. In this article, the author describes how her seventh-grade painting…

  20. The color of money

    DEFF Research Database (Denmark)

    Ásgeirsson, Árni Gunnar; Kristjánsson, Árni; Einarsdóttir, Kristin Vala

    2014-01-01

    of attention are affected by reward, and whether the effect involves general enhancement or is specific to discrete components of attention. Observers viewed brief displays of differentially colored letters and reported their identity. Each color signified a consistent monetary value and we measured...

  1. Image color reduction method for color-defective observers using a color palette composed of 20 particular colors

    Science.gov (United States)

    Sakamoto, Takashi

    2015-01-01

    This study describes a color enhancement method that uses a color palette especially designed for protan and deutan defects, commonly known as red-green color blindness. The proposed color reduction method is based on a simple color mapping. Complicated computation and image processing are not required by using the proposed method, and the method can replace protan and deutan confusion (p/d-confusion) colors with protan and deutan safe (p/d-safe) colors. Color palettes for protan and deutan defects proposed by previous studies are composed of few p/d-safe colors. Thus, the colors contained in these palettes are insufficient for replacing colors in photographs. Recently, Ito et al. proposed a p/dsafe color palette composed of 20 particular colors. The author demonstrated that their p/d-safe color palette could be applied to image color reduction in photographs as a means to replace p/d-confusion colors. This study describes the results of the proposed color reduction in photographs that include typical p/d-confusion colors, which can be replaced. After the reduction process is completed, color-defective observers can distinguish these confusion colors.

  2. Cloning vectors based on cryptic plasmids isolated from lactic acid bacteria: their characteristics and potential applications in biotechnology.

    Science.gov (United States)

    Shareck, Julie; Choi, Young; Lee, Byong; Miguez, Carlos B

    2004-01-01

    Lactic acid bacteria (LAB) are Gram positive bacteria, widely distributed in nature, and industrially important as they are used in a variety of industrial food fermentations. The use of genetic engineering techniques is an effective means of enhancing the industrial applicability of LAB. However, when using genetic engineering technology, safety becomes an essential factor for the application of improved LAB to the food industry. Cloning and expression systems should be derived preferably from LAB cryptic plasmids that generally encode genes for which functions can be proposed, but no phenotypes can be observed. However, some plasmid-encoded functions have been discovered in cryptic plasmids originating from Lactobacillus, Streptococcus thermophilus, and Pediococcus spp. and can be used as selective marker systems in vector construction. This article presents information concerning LAB cryptic plasmids, and their structures, functions, and applications. A total of 134 cryptic plasmids collated are discussed.

  3. Aspects of Color Superconductivity

    CERN Document Server

    Hong, D K

    2001-01-01

    I discuss some aspects of recent developments in color superconductivity in high density quark matter. I calculate the Cooper pair gap and the critical points at high density, where magnetic gluons are not screened. The ground state of high density QCD with three light flavors is shown to be a color-flavor locking state, which can be mapped into the low-density hadronic phase. The meson mass at the CFL superconductor is also calculated. The CFL color superconductor is bosonized, where the Fermi sea is identified as a $Q$-matter and the gapped quarks as topological excitations, called superqualitons, of mesons. Finally, as an application of color supercoductivity, I discuss the neutrino interactions in the CFL color superconductor.

  4. Color Medical Image Analysis

    CERN Document Server

    Schaefer, Gerald

    2013-01-01

    Since the early 20th century, medical imaging has been dominated by monochrome imaging modalities such as x-ray, computed tomography, ultrasound, and magnetic resonance imaging. As a result, color information has been overlooked in medical image analysis applications. Recently, various medical imaging modalities that involve color information have been introduced. These include cervicography, dermoscopy, fundus photography, gastrointestinal endoscopy, microscopy, and wound photography. However, in comparison to monochrome images, the analysis of color images is a relatively unexplored area. The multivariate nature of color image data presents new challenges for researchers and practitioners as the numerous methods developed for monochrome images are often not directly applicable to multichannel images. The goal of this volume is to summarize the state-of-the-art in the utilization of color information in medical image analysis.

  5. Color vision and dentistry.

    Science.gov (United States)

    Wasson, W; Schuman, N

    1992-05-01

    Color vision is a critical component of restorative and esthetic dentistry, but dentists, as a group, do not have their color vision tested at any time during their careers. A study was undertaken to ascertain the color-vision status of practicing dental personnel at the University of Tennessee, College of Dentistry. One hundred fifty individuals, 75 men and 75 women, were screened. The results corroborated the existing medical data for the general population. It was found that 9.3% of the men and none of the women exhibited color-vision defect. Since most dentists are male, this study demonstrates an area of potential weakness for some practitioners. Once a color-vision problem is found, it is simple to remedy by employing a team approach to shade matching or mechanical means of matching shades (by the practitioner). No ethnic or racial distinctions were detected, although these have been reported in other studies.

  6. Color polymorphism in a land snail Cepaea nemoralis (Pulmonata: Helicidae) as viewed by potential avian predators

    Science.gov (United States)

    Surmacki, Adrian; Ożarowska-Nowicka, Agata; Rosin, Zuzanna M.

    2013-06-01

    Avian predation is one of the most probable factors maintaining polymorphism of shell coloration in Cepaea nemoralis. This assumption is justified by the fact that birds frequently forage on snails and their prey choice varies with morph coloration. However, in all preceding studies, the conspicuousness of morphs was determined only by using human vision which is significantly different from birds' visual perception. In this study, we assessed how birds perceive colors of four Cepaea nemoralis morphs using physiological models of avian color vision. We calculated combined chromatic and achromatic contrast between shells and three habitat background types as a measure of shell conspicuousness. The degree of background color matching in Cepaea nemoralis depended on both shell morph and habitat type. On average, banded morphs were more conspicuous than unbanded morphs. Morphs were the most cryptic against dry vegetation and the most conspicuous on bare ground. We also found a significant interaction between habitat type and color morph. The relative conspicuousness of shell morphs depended on habitat and was the most variable against green vegetation. Our study provides the first insight into how potential avian predators view Cepaea nemoralis morphs. The results are discussed in light of multiple hypotheses explaining selective predation on Cepaea nemoralis morphs.

  7. Simultaneous contrast and gamut relativity in achromatic color perception.

    Science.gov (United States)

    Vladusich, Tony

    2012-09-15

    Simultaneous contrast refers to the respective whitening or blackening of physically identical image regions surrounded by regions of low or high luminance, respectively. A common method of measuring the strength of this effect is achromatic color matching, in which subjects adjust the luminance of a target region to achieve an achromatic color match with another region. Here I present psychophysical data questioning the assumption--built into many models of achromatic color perception--that achromatic colors are represented as points in a one-dimensional (1D) perceptual space, or an absolute achromatic color gamut. I present an alternative model in which the achromatic color gamut corresponding to a target region is defined relatively, with respect to surround luminance. Different achromatic color gamuts in this model correspond to different 1D lines through a 2D perceptual space composed of blackness and whiteness dimensions. Each such line represents a unique gamut of achromatic colors ranging from black to white. I term this concept gamut relativity. Achromatic color matches made between targets surrounded by regions of different luminance are shown to reflect the relative perceptual distances between points lying on different gamut lines. The model suggests a novel geometrical approach to simultaneous contrast and achromatic color matching in terms of the vector summation of local luminance and contrast components, and sets the stage for a unified computational theory of achromatic color perception. 2012 Elsevier Ltd. All rights reserved

  8. Porcelain three-dimensional shape reconstruction and its color reconstruction

    Science.gov (United States)

    Yu, Xiaoyang; Wu, Haibin; Yang, Xue; Yu, Shuang; Wang, Beiyi; Chen, Deyun

    2013-01-01

    In this paper, structured light three-dimensional measurement technology was used to reconstruct the porcelain shape, and further more the porcelain color was reconstructed. So the accurate reconstruction of the shape and color of porcelain was realized. Our shape measurement installation drawing is given. Because the porcelain surface is color complex and highly reflective, the binary Gray code encoding is used to reduce the influence of the porcelain surface. The color camera was employed to obtain the color of the porcelain surface. Then, the comprehensive reconstruction of the shape and color was realized in Java3D runtime environment. In the reconstruction process, the space point by point coloration method is proposed and achieved. Our coloration method ensures the pixel corresponding accuracy in both of shape and color aspects. The porcelain surface shape and color reconstruction experimental results completed by proposed method and our installation, show that: the depth range is 860 ˜ 980mm, the relative error of the shape measurement is less than 0.1%, the reconstructed color of the porcelain surface is real, refined and subtle, and has the same visual effect as the measured surface.

  9. Stool Color: When to Worry

    Science.gov (United States)

    Stool color: When to worry Yesterday, my stool color was bright green. Should I be concerned? Answers from Michael ... M.D. Stool comes in a range of colors. All shades of brown and even green are ...

  10. High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species

    DEFF Research Database (Denmark)

    Razgour, Orly; Clare, Elizabeth L.; Zeale, Matt R.K.

    2011-01-01

    cryptic bat species that are sympatric in southern England (Plecotus austriacus and P. auritus) (Fig. 1). Using Roche FLX 454 (Roche, Basel, CH) high-throughput sequencing (HTS) and uniquely tagged generic arthropod primers, we identified 142 prey Molecular Operational Taxonomic Units (MOTUs) in the diet...... of the cryptic bats, 60% of which were assigned to a likely species or genus. The findings from the molecular study supported the results of microscopic analyses in showing that the diets of both species were dominated by lepidopterans. However, HTS provided a sufficiently high resolution of prey identification...... to determine fine-scale differences in resource use. Although both bat species appeared to have a generalist diet, eared-moths from the family Noctuidae were the main prey consumed. Interspecific niche overlap was greater than expected by chance (O(jk) = 0.72, P

  11. Complex genital structures indicate cryptic female choice in a haplogyne spider (Arachnida, Araneae, Oonopidae, Gamasomorphinae).

    Science.gov (United States)

    Burger, Matthias; Nentwig, Wolfgang; Kropf, Christian

    2003-01-01

    Female genital structures with their allied muscles of the haplogyne spider Opopaea fosuma are described. A functional explanation of this system is given, which indicates that cryptic female choice may occur in these spiders: the anterior wall of their spermatheca is strongly sclerotized and possesses a cone-shaped hole in its upper part. A transverse sclerite that serves as muscle attachment bears a nail-like structure and lies in a chitinized area of the anterior wall of the uterus externus. Muscle contraction presses this nail into the hole of the spermatheca. In this way, the uterus externus gets both locked and fixed. Furthermore, as this occurs the copulatory orifice is enlarged and the resulting suction probably leads to previously deposited sperm being drawn from the spermatheca and dumped. This is a common mechanism used by females to influence a male's chances of fathering their offspring in a process known as cryptic female choice.

  12. Molecular differentiation of cryptic stage ofEchinococcus granulosusand Taenia species from faecal and environmental samples

    Institute of Scientific and Technical Information of China (English)

    Diganta Pan; Sumanta De; Asit Kumar Bera; Subhashis Bandyopadhyay; Subrata Kumar Das; Debasis Bhattacharya

    2010-01-01

    Objective:To differentiate cryptic stage ofEchinococcus granulosus(E. granulosus) andTaenia by PCR-RFLP and sequence information of amplicon.Methods: DNA were isolated from metacestodes stage ofTaenia andE. granulosus using DNA isolation kit (Q-BIOgene kit, USA), the amplified and purified DNA product was then cloned and sent for sequencing. The generating sequence information was used for amplicons identification.Results:Out of 112 faecal and environmental samples, 16 exhibited positive result. The product size of amplicon positive for E. granulosus was 310 bp; whereas, forTaenia spp. sizes varied from 379 to 388 bp. Restriction profile of actin II with Csp61 also differedTaenia spp. andE. granulosus.Conclusions: The result of the study indicated that, the primers were useful to differentiate cryptic stage of the two genera which is yet to be reported earlier.

  13. The r1162 mob proteins can promote conjugative transfer from cryptic origins in the bacterial chromosome.

    Science.gov (United States)

    Meyer, Richard

    2009-03-01

    The mobilization proteins of the broad-host-range plasmid R1162 can initiate conjugative transfer of a plasmid from a 19-bp locus that is partially degenerate in sequence. Such loci are likely to appear by chance in the bacterial chromosome and could act as cryptic sites for transfer of chromosomal DNA when R1162 is present. The R1162-dependent transfer of chromosomal DNA, initiated from one such potential site in Pectobacterium atrosepticum, is shown here. A second active site was identified in Escherichia coli, where it is also shown that large amounts of DNA are transferred. This transfer probably reflects the combined activity of the multiple cryptic origins in the chromosome. Transfer of chromosomal DNA due to the presence of a plasmid in the cytoplasm describes a previously unrecognized potential for the exchange of bacterial DNA.

  14. Three sisters in the same dress: cryptic speciation in African odonates.

    Science.gov (United States)

    Cordero-Rivera, A; Lorenzo-Carballa, M O

    2010-09-01

    The discovery of cryptic species (i.e. two or more distinct but morphologically undistinguishable species) has grown exponentially in the last two decades, due mainly to the increasing availability of DNA sequences. This suggests that hidden in the known species, many of which have been described based solely on morphological information, there might be a high number of species waiting to be discovered. In this issue Damm et al. (2010) use a combination of genetic, morphological and ecological evidence to identify the first cryptic species complex found within dragonflies (insect order Odonata). Their findings add more evidence for the importance of combining information from different disciplines to new species' discovery (DeSalle et al. 2005).

  15. Large cryptic internal sequence repeats in protein structures from Homo sapiens

    Indian Academy of Sciences (India)

    R Sarani; N A Udayaprakash; R Subashini; P Mridula; T Yamane; K Sekar

    2009-03-01

    Amino acid sequences are known to constantly mutate and diverge unless there is a limiting condition that makes such a change deleterious. However, closer examination of the sequence and structure reveals that a few large, cryptic repeats are nevertheless sequentially conserved. This leads to the question of why only certain repeats are conserved at the sequence level. It would be interesting to find out if these sequences maintain their conservation at the three-dimensional structure level. They can play an active role in protein and nucleotide stability, thus not only ensuring proper functioning but also potentiating malfunction and disease. Therefore, insights into any aspect of the repeats – be it structure, function or evolution – would prove to be of some importance. This study aims to address the relationship between protein sequence and its three-dimensional structure, by examining if large cryptic sequence repeats have the same structure.

  16. Il colore delle cose

    Directory of Open Access Journals (Sweden)

    Vincenzo Vitiello

    2017-09-01

    Full Text Available The topic of this essay is the work of the reflection. After having focused on the «rift» between reflection (i.e., «seeing oneself» and its working in Valéry’s thought, Vitiello focuses on the process which Hegel described in The Phenomenology of Spirit, namely the process of the experience of the consciousness, which elevates itself to the consciousness of the experience. The conclusion is strongly critical: Hegel misses the aim at the very point in which he achieves it. Indeed, in the absolute knowledge, in the complete and perfect view of itself, of the light which sees the light, the experience of the consciousness itself fails, its becoming, its «imperfection» fail. The critique of Hegel, passing through Nietzsche, expands to a critique of language, in particular of the language of «being» and of «is», and of the Heideggerian tautologies, such as «das Ereignis ereignet», «das Ding dingt», «die Welt weltet». An important passage of the text concerns the theatrical language, in which the word seems to regain the original bond between voice and gesture, which remains divided nevertheless, because the medium itself which connects them – i.e., the «color» of the word – is «outside» the word and «outside» the gesture. Only the word of the act, of the pragmata, remains. In such a word, doing exhibits its most appropriate modality, namely the immediacy of being-affected: the cry of pain; or the reflexive mediacy of the moral imperative: Handle! The two opposite «colours» of the things.

  17. Color-avoiding percolation

    CERN Document Server

    Krause, Sebastian M; Zlatić, Vinko

    2016-01-01

    Many real world networks have groups of similar nodes which are vulnerable to the same failure or adversary. Nodes can be colored in such a way that colors encode the shared vulnerabilities. Using multiple paths to avoid these vulnerabilities can greatly improve network robustness. Color-avoiding percolation provides a theoretical framework for analyzing this scenario, focusing on the maximal set of nodes which can be connected via multiple color-avoiding paths. In this paper we extend the basic theory of color-avoiding percolation that was published in [Krause et. al., Phys. Rev. X 6 (2016) 041022]. We explicitly account for the fact that the same particular link can be part of different paths avoiding different colors. This fact was previously accounted for with a heuristic approximation. We compare this approximation with a new, more exact theory and show that the new theory is substantially more accurate for many avoided colors. Further, we formulate our new theory with differentiated node functions, as s...

  18. Theoretical aspects of color vision

    Science.gov (United States)

    Wolbarsht, M. L.

    1972-01-01

    The three color receptors of Young-Helmholtz and the opponent colors type of information processing postulated by Hering are both present in the human visual system. This mixture accounts for both the phenomena of color matching or hue discrimination and such perceptual qualities of color as the division of the spectrum into color bands. The functioning of the cells in the visual system, especially within the retina, and the relation of this function to color perception are discussed.

  19. High frequency of T cells specific for cryptic epitopes in melanoma patients

    Science.gov (United States)

    Andersen, Rikke Sick; Andersen, Sofie Ramskov; Hjortsø, Mads Duus; Lyngaa, Rikke; Idorn, Manja; Køllgård, Tania Maria; Met, Özcan; thor Straten, Per; Hadrup, Sine Reker

    2013-01-01

    A number of cytotoxic T-cell epitopes are cryptic epitopes generated from non-conventional sources. These include epitopes that are encoded by alternative open reading frames or in generally non-coding genomic regions, such as introns. We have previously observed a frequent recognition of cryptic epitopes by tumor infiltrating lymphocytes isolated from melanoma patients. Here, we show that such cryptic epitopes are more frequently recognized than antigens of the same class encoded by canonical reading frames. Furthermore, we report the presence of T cells specific for three cryptic epitopes encoded in intronic sequences, as a result of incomplete splicing, in the circulation of melanoma patients. One of these epitopes derives from antigen isolated from immunoselected melanoma 2 (AIM2), while the two others are encoded in an alternative open reading frame of an incompletely spliced form of N-acetylglucosaminyl-transferase V (GNT-V) known as NA17-A. We have detected frequent T-cell responses against AIM2 and NA17-A epitopes in the blood of melanoma patients, both prior and after one round of in vitro peptide stimulation, but not in the circulation of healthy individuals and patients with breast or renal carcinoma. In summary, our findings indicate that the T-cell reactivity against AIM2 and NA17-A in the blood of melanoma patients is extensive, suggesting that—similar to melan A (also known as MART1)—these antigens might be used for immunomonitoring or as model antigens in several clinical and preclinical settings. PMID:24073381

  20. "Nested" cryptic diversity in a widespread marine ecosystem engineer: a challenge for detecting biological invasions

    Directory of Open Access Journals (Sweden)

    Walls Kathy

    2011-06-01

    Full Text Available Abstract Background Ecosystem engineers facilitate habitat formation and enhance biodiversity, but when they become invasive, they present a critical threat to native communities because they can drastically alter the receiving habitat. Management of such species thus needs to be a priority, but the poorly resolved taxonomy of many ecosystem engineers represents a major obstacle to correctly identifying them as being either native or introduced. We address this dilemma by studying the sea squirt Pyura stolonifera, an important ecosystem engineer that dominates coastal communities particularly in the southern hemisphere. Using DNA sequence data from four independently evolving loci, we aimed to determine levels of cryptic diversity, the invasive or native status of each regional population, and the most appropriate sampling design for identifying the geographic ranges of each evolutionary unit. Results Extensive sampling in Africa, Australasia and South America revealed the existence of "nested" levels of cryptic diversity, in which at least five distinct species can be further subdivided into smaller-scale genetic lineages. The ranges of several evolutionary units are limited by well-documented biogeographic disjunctions. Evidence for both cryptic native diversity and the existence of invasive populations allows us to considerably refine our view of the native versus introduced status of the evolutionary units within Pyura stolonifera in the different coastal communities they dominate. Conclusions This study illustrates the degree of taxonomic complexity that can exist within widespread species for which there is little taxonomic expertise, and it highlights the challenges involved in distinguishing between indigenous and introduced populations. The fact that multiple genetic lineages can be native to a single geographic region indicates that it is imperative to obtain samples from as many different habitat types and biotic zones as possible

  1. Copulatory courtship and cryptic female choice in red flour beetles Tribolium castaneum.

    OpenAIRE

    Edvardsson, M; Arnqvist, G.

    2000-01-01

    Males of many animal species engage in courtship behaviours during and after copulation that appear to be solely aimed at stimulating the female. It has been suggested that these behaviours have evolved by cryptic female choice, whereby females are thought to impose biases on male postmating paternity success. Males of the red flour beetle Tribolium castaneum rub the lateral edges of the females' elytra with their tarsi during copulation. We manipulated female perception of this behaviour by ...

  2. Cryptic female choice: frogs reduce clutch size when amplexed by undesired males.

    OpenAIRE

    Reyer, H U; Frei, G; Som, C

    1999-01-01

    In species with internal fertilization, females can 'cryptically' choose (e.g. through sperm selection) which individuals sire their offspring, even when their overt preferences for copulatory partners are overrun by male-male competition and sexual coercion. The experiment presented here reveals that control of paternity after copulation has begun is also possible in species with external fertilization. Females of the hybridogenetic Rana essonae-Rana esculenta (LL-LR) waterfrog complex adjus...

  3. Experimental demonstration of possible cryptic female choice on male tsetse fly genitalia

    OpenAIRE

    Briceño-Lobo, Daniel; Eberhard-Chabtree, William

    2009-01-01

    artículo -- Universidad de Costa Rica. Escuela de Biología, 2009. Este documento es privado debido a restricciones de derechos de autor del publicador. A possible explanation for one of the most general trends in animal evolution – rapid divergent evolution of animal genitalia – is that male genitalia are used as courtship devices that influence cryptic female choice. But experimental demonstrations of stimulatory effects of male genitalia on female reproductive processes have gen...

  4. Cryptic choice of conspecific sperm controlled by the impact of ovarian fluid on sperm swimming behavior

    OpenAIRE

    Yeates, S E; Diamond, S. E.; Einum, S.; Emerson, B C; Holt, W.V.; Gage, M.J.G.

    2013-01-01

    Despite evidence that variation in male–female reproductive compatibility exists in many fertilization systems, identifying mechanisms of cryptic female choice at the gamete level has been a challenge. Here, under risks of genetic incompatibility through hybridization, we show how salmon and trout eggs promote fertilization by conspecific sperm. Using in vitro fertilization experiments that replicate the gametic microenvironment, we find complete interfertility between both species. However, ...

  5. Hidden biodiversity in an ecologically important freshwater amphipod: differences in genetic structure between two cryptic species.

    Directory of Open Access Journals (Sweden)

    Anja Marie Westram

    Full Text Available Cryptic species, i.e. species that are morphologically hard to distinguish, have been detected repeatedly in various taxa and ecosystems. In order to evaluate the importance of this finding, we have to know in how far cryptic species differ in various aspects of their biology. The amphipod Gammarus fossarum is a key invertebrate in freshwater streams and contains several cryptic species. We examined the population genetic structure, genetic diversity and demographic history of two of them (type A and type B using microsatellite markers and asked whether they show significant differences. We present results of population genetic analyses based on a total of 37 populations from the headwaters of two major European drainages, Rhine and Rhone. We found that, in both species, genetic diversity was geographically structured among and within drainages. For type A in the Rhine and type B in the Rhone, we detected significant patterns of isolation by distance. The increase of genetic differentiation with geographical distance, however, was much higher in type A than in type B. This result indicates substantial interspecific differences in population history and/or the extent of current gene flow between populations. In the Rhine, type B does not show evidence of isolation by distance, and population differentiation is relatively low across hundreds of kilometres. The majority of these populations also show signatures of recent bottlenecks. These patterns are consistent with a recent expansion of type B into the Rhine drainage. In summary, our results suggest considerable and previously unrecognized interspecific differences in the genetic structure of these cryptic keystone species.

  6. Evidence for cryptic speciation in directly transmitted gyrodactylid parasites of Trinidadian guppies.

    Directory of Open Access Journals (Sweden)

    Raquel Xavier

    Full Text Available Cryptic species complexes are common among parasites, which tend to have large populations and are subject to rapid evolution. Such complexes may arise through host-parasite co-evolution and/or host switching. For parasites that reproduce directly on their host, there might be increased opportunities for sympatric speciation, either by exploiting different hosts or different micro-habitats within the same host. The genus Gyrodactylus is a specious group of viviparous monogeneans. These ectoparasites transfer between teleosts during social contact and cause significant host mortality. Their impact on the guppy (Poecilia reticulata, an iconic evolutionary and ecological model species, is well established and yet the population genetics and phylogenetics of these parasites remains understudied. Using mtDNA sequencing of the host and its parasites, we provide evidence of cryptic speciation in Gyrodactylus bullatarudis, G. poeciliae and G. turnbulli. For the COII gene, genetic divergence of lineages within each parasite species ranged between 5.7 and 17.2%, which is typical of the divergence observed between described species in this genus. Different lineages of G. turnbulli and G. poeciliae appear geographically isolated, which could imply allopatric speciation. In addition, for G. poeciliae, co-evolution with a different host species cannot be discarded due to its host range. This parasite was originally described on P. caucana, but for the first time here it is also recorded on the guppy. The two cryptic lineages of G. bullatarudis showed considerable geographic overlap. G. bullatarudis has a known wide host range and it can also utilize a killifish (Anablepsoides hartii as a temporary host. This killifish is capable of migrating overland and it could act as a transmission vector between otherwise isolated populations. Additional genetic markers are needed to confirm the presence of these cryptic Gyrodactylus species complexes, potentially leading

  7. Colors and contact dermatitis.

    Science.gov (United States)

    Bonamonte, Domenico; Foti, Caterina; Romita, Paolo; Vestita, Michelangelo; Angelini, Gianni

    2014-01-01

    The diagnosis of skin diseases relies on several clinical signs, among which color is of paramount importance. In this review, we consider certain clinical presentations of both eczematous and noneczematous contact dermatitis in which color plays a peculiar role orientating toward the right diagnosis. The conditions that will be discussed include specific clinical-morphologic subtypes of eczematous contact dermatitis, primary melanocytic, and nonmelanocytic contact hyperchromia, black dermographism, contact chemical leukoderma, and others. Based on the physical, chemical, and biologic factors underlying a healthy skin color, the various skin shades drawing a disease picture are thoroughly debated, stressing their etiopathogenic origins and histopathologic aspects.

  8. Color and neighbor edge directional difference feature for image retrieval

    Institute of Scientific and Technical Information of China (English)

    Chaobing Huang; Shengsheng Yu; Jingli Zhou; Hongwei Lu

    2005-01-01

    @@ A novel image feature termed neighbor edge directional difference unit histogram is proposed, in which the neighbor edge directional difference unit is defined and computed for every pixel in the image, and is used to generate the neighbor edge directional difference unit histogram. This histogram and color histogram are used as feature indexes to retrieve color image. The feature is invariant to image scaling and translation and has more powerful descriptive for the natural color images. Experimental results show that the feature can achieve better retrieval performance than other color-spatial features.

  9. Image Segmentation by Hierarchical Spatial and Color Spaces Clustering

    Institute of Scientific and Technical Information of China (English)

    YU Wei

    2005-01-01

    Image segmentation, as a basic building block for many high-level image analysis problems, has attracted many research attentions over years. Existing approaches, however, are mainly focusing on the clustering analysis in the single channel information, i.e., either in color or spatial space, which may lead to unsatisfactory segmentation performance. Considering the spatial and color spaces jointly, this paper proposes a new hierarchical image segmentation algorithm, which alternately clusters the image regions in color and spatial spaces in a fine to coarse manner. Without losing the perceptual consistence, the proposed algorithm achieves the segmentation result using only very few number of colors according to user specification.

  10. A platform for colorful solar cells with enhanced absorption

    Science.gov (United States)

    Dhindsa, Navneet; Walia, Jaspreet; Singh Saini, Simarjeet

    2016-12-01

    We demonstrate submicron thick platform integrating amorphous silicon nanowires and thin-films achieving vivid colors in transmission and reflection. The platform nearly doubles the absorption efficiency compared to the starting thin-film without much compromising with color diverseness. The structural colors can be changed over a wide range by changing the diameters of the nanowires while still keeping the absorption efficiency higher than starting thin-film. The optical response of the platform is conceptually understood for different diameters combined with different thin-film thicknesses indicating the presence of leaky waveguide modes and coupled cavity modes. Our proposed platform can enable architectural low price colorful solar cells on transparent substrates.

  11. A platform for colorful solar cells with enhanced absorption.

    Science.gov (United States)

    Dhindsa, Navneet; Walia, Jaspreet; Saini, Simarjeet Singh

    2016-12-09

    We demonstrate submicron thick platform integrating amorphous silicon nanowires and thin-films achieving vivid colors in transmission and reflection. The platform nearly doubles the absorption efficiency compared to the starting thin-film without much compromising with color diverseness. The structural colors can be changed over a wide range by changing the diameters of the nanowires while still keeping the absorption efficiency higher than starting thin-film. The optical response of the platform is conceptually understood for different diameters combined with different thin-film thicknesses indicating the presence of leaky waveguide modes and coupled cavity modes. Our proposed platform can enable architectural low price colorful solar cells on transparent substrates.

  12. Taxonomic richness and abundance of cryptic peracarid crustaceans in the Puerto Morelos Reef National Park, Mexico

    Directory of Open Access Journals (Sweden)

    Luz Veronica Monroy-Velázquez

    2017-06-01

    Full Text Available Background and Aims Cryptic peracarids are an important component of the coral reef fauna in terms of diversity and abundance, yet they have been poorly studied. The aim of this study was to evaluate the taxonomic richness and abundance of cryptic peracarids in coral rubble in the Puerto Morelos Reef National Park, Mexico (PMRNP, and their relationship with depth. Methods Three reef sites were selected: (1 Bonanza, (2 Bocana, and (3 Jardines. At each site six kilograms of coral rubble were collected over four sampling periods at three depths: 3 m (back-reef, 6–8 m (fore-reef, and 10–12 m (fore-reef. Results A total of 8,887 peracarid crustaceans belonging to 200 taxa distributed over five orders and 63 families was obtained; 70% of the taxa were identified to species and 25% to genus level. Fifty species of those collected represent new records for the Mexican Caribbean Sea. Isopoda was the most speciose order while Tanaidacea was the most abundant. Discussion Cryptic peracarid taxonomic richness and abundance were related to depth with higher values of both parameters being found in the shallow (3 m back-reef, possibly due to a higher reef development and a greater accumulation of coral rubble produced during hurricanes. Peracarid data obtained in the present study can be used as a baseline for future monitoring programs in the PMRNP.

  13. No evidence for external genital morphology affecting cryptic female choice and reproductive isolation in Drosophila.

    Science.gov (United States)

    LeVasseur-Viens, Hélène; Polak, Michal; Moehring, Amanda J

    2015-07-01

    Genitalia are one of the most rapidly diverging morphological features in animals. The evolution of genital morphology is proposed to be driven by sexual selection via cryptic female choice, whereby a female selectively uptakes and uses a particular male's sperm on the basis of male genital morphology. The resulting shifts in genital morphology within a species can lead to divergence in genitalia between species, and consequently to reproductive isolation and speciation. Although this conceptual framework is supported by correlative data, there is little direct empirical evidence. Here, we used a microdissection laser to alter the morphology of the external male genitalia in Drosophila, a widely used genetic model for both genital shape and cryptic female choice. We evaluate the effect of precision alterations to lobe morphology on both interspecific and intraspecific mating, and demonstrate experimentally that the male genital lobes do not affect copulation duration or cryptic female choice, contrary to long-standing assumptions regarding the role of the lobes in this model system. Rather, we demonstrate that the lobes are essential for copulation to occur. Moreover, slight alterations to the lobes significantly reduced copulatory success only in competitive environments, identifying precopulatory sexual selection as a potential contributing force behind genital diversification.

  14. Cryptic female choice favours sperm from major histocompatibility complex-dissimilar males.

    Science.gov (United States)

    Løvlie, Hanne; Gillingham, Mark A F; Worley, Kirsty; Pizzari, Tommaso; Richardson, David S

    2013-10-22

    Cryptic female choice may enable polyandrous females to avoid inbreeding or bias offspring variability at key loci after mating. However, the role of these genetic benefits in cryptic female choice remains poorly understood. Female red junglefowl, Gallus gallus, bias sperm use in favour of unrelated males. Here, we experimentally investigate whether this bias is driven by relatedness per se, or by similarity at the major histocompatibility complex (MHC), genes central to vertebrate acquired immunity, where polymorphism is critical to an individual's ability to combat pathogens. Through experimentally controlled natural matings, we confirm that selection against related males' sperm occurs within the female reproductive tract but demonstrate that this is more accurately predicted by MHC similarity: controlling for relatedness per se, more sperm reached the eggs when partners were MHC--dissimilar. Importantly, this effect appeared largely owing to similarity at a single MHC locus (class I minor). Further, the effect of MHC similarity was lost following artificial insemination, suggesting that male phenotypic cues might be required for females to select sperm differentially. These results indicate that postmating mechanisms that reduce inbreeding may do so as a consequence of more specific strategies of cryptic female choice promoting MHC diversity in offspring.

  15. Strategic male mating effort and cryptic male choice in a scorpionfly.

    Science.gov (United States)

    Engqvist, L; Sauer, K P

    2001-04-07

    In animal species with high male mating effort, males often find themselves in a dilemma: by increasing their mating effort, the gain from each copulation increases but simultaneously reduces available resources and, thus, the opportunity for future copulations. Therefore, we expect males to spend less reproductive resources on matings that provide low reproductive potential, thereby saving resources for future copulations, possibly with high-quality females, a sort of cryptic male choice. However, the strength of the trade-off between investment in a current mating and resources available for future matings must not be the same for all males. Males with relatively high mating costs should allocate their limited resources more cautiously than males with more plentiful resources. Here, we examine this prediction in the scorpionfly Panorpa cognata. Prior to copulation, males produce a large salivary mass on which females feed during copulation. We show that the production of larger salivary masses leads to longer copulations. Moreover, the size of the salivary gland and salivary mass increases with increasing male condition. However, males in poor condition make a relatively higher mating investment than males in good condition. We therefore expect male condition to influence cryptic male choice. In accordance with our hypothesis, only males in poor condition choose cryptically, producing larger salivary masses in copulations with females of high fecundity.

  16. Cryptic female choice during spermatophore transfer in Tribolium castaneum (Coleoptera: Tenebrionidae).

    Science.gov (United States)

    Fedina, Tatyana Y

    2007-01-01

    Sexual selection in both males and females promotes traits and behaviors that allow control over paternity when female mates with multiple males. Nonetheless, mechanisms of cryptic female choice have been consistently overlooked, due to traditional focus on sperm competition as well as difficulty in distinguishing male vs. female influence over processes occurring during and after mating. The first part of this study describes morphology and transformation of Tribolium castaneum spermatophores inferred from dissecting females immediately after normal or interrupted copulations. T. castaneum males are found to transfer spermatophores as an invaginated tube that everts inside the female bursa and which is filled with sperm during copulation. This sequence of events makes it feasible for females to control the sperm quantity transferred in each spermatophore. Through manipulation of the male phenotypic quality (by starvation) and manipulation of female control over sperm transfer (by killing a subset of females), the second part of this study examines whether females use control over transferred sperm quantity as a cryptic choice mechanism. Fed males transferred significantly more sperm per spermatophore than starved males but only when mating with live females. These results suggest an active differentiation by live females against starved males and provide an evidence for the proposed cryptic female choice mechanism.

  17. Experimental demonstration of possible cryptic female choice on male tsetse fly genitalia.

    Science.gov (United States)

    Briceño, R D; Eberhard, W G

    2009-11-01

    A possible explanation for one of the most general trends in animal evolution - rapid divergent evolution of animal genitalia - is that male genitalia are used as courtship devices that influence cryptic female choice. But experimental demonstrations of stimulatory effects of male genitalia on female reproductive processes have generally been lacking. Previous studies of female reproductive physiology in the tsetse fly Glossina morsitans suggested that stimulation during copulation triggers ovulation and resistance to remating. In this study we altered the form of two male genital structures that squeeze the female's abdomen rhythmically in G. morsitans centralis and induced, as predicted, cryptic female choice against the male: sperm storage decreased, while female remating increased. Further experiments in which we altered the female sensory abilities at the site contacted by these male structures during copulation, and severely altered or eliminated the stimuli the male received from this portion of his genitalia, suggested that the effects of genital alteration on sperm storage were due to changes in tactile stimuli received by the female, rather than altered male behavior. These data support the hypothesis that sexual selection by cryptic female choice has been responsible for the rapid divergent evolution of male genitalia in Glossina; limitations of this support are discussed. It appears that a complex combination of stimuli trigger female ovulation, sperm storage, and remating, and different stimuli affect different processes in G. morsitans, and that the same processes are controlled differently in G. pallidipes. This puzzling diversity in female triggering mechanisms may be due to the action of sexual selection.

  18. Cryptic choice of conspecific sperm controlled by the impact of ovarian fluid on sperm swimming behavior.

    Science.gov (United States)

    Yeates, Sarah E; Diamond, Sian E; Einum, Sigurd; Emerson, Brent C; Holt, William V; Gage, Matthew J G

    2013-12-01

    Despite evidence that variation in male-female reproductive compatibility exists in many fertilization systems, identifying mechanisms of cryptic female choice at the gamete level has been a challenge. Here, under risks of genetic incompatibility through hybridization, we show how salmon and trout eggs promote fertilization by conspecific sperm. Using in vitro fertilization experiments that replicate the gametic microenvironment, we find complete interfertility between both species. However, if either species' ova were presented with equivalent numbers of both sperm types, conspecific sperm gained fertilization precedence. Surprisingly, the species' identity of the eggs did not explain this cryptic female choice, which instead was primarily controlled by conspecific ovarian fluid, a semiviscous, protein-rich solution that bathes the eggs and is released at spawning. Video analyses revealed that ovarian fluid doubled sperm motile life span and straightened swimming trajectory, behaviors allowing chemoattraction up a concentration gradient. To confirm chemoattraction, cell migration tests through membranes containing pores that approximated to the egg micropyle showed that conspecific ovarian fluid attracted many more spermatozoa through the membrane, compared with heterospecific fluid or water. These combined findings together identify how cryptic female choice can evolve at the gamete level and promote reproductive isolation, mediated by a specific chemoattractive influence of ovarian fluid on sperm swimming behavior.

  19. Acoustic divergence in the communication of cryptic species of nocturnal primates (Microcebus ssp.

    Directory of Open Access Journals (Sweden)

    Zimmermann Elke

    2008-05-01

    Full Text Available Abstract Background A central question in evolutionary biology is how cryptic species maintain species cohesiveness in an area of sympatry. The coexistence of sympatrically living cryptic species requires the evolution of species-specific signalling and recognition systems. In nocturnal, dispersed living species, specific vocalisations have been suggested to act as an ideal premating isolation mechanism. We studied the structure and perception of male advertisement calls of three nocturnal, dispersed living mouse lemur species, the grey mouse lemur (Microcebus murinus, the golden brown mouse lemur (M. ravelobensis and the Goodman's mouse lemur (M. lehilahytsara. The first two species occur sympatrically, the latter lives allopatrically to them. Results A multi-parameter sound analysis revealed prominent differences in the frequency contour and in the duration of advertisement calls. To test whether mouse lemurs respond specifically to calls of the different species, we conducted a playback experiment with M. murinus from the field using advertisement calls and alarm whistle calls of all three species. Individuals responded significantly stronger to conspecific than to heterospecific advertisement calls but there were no differences in response behaviour towards statistically similar whistle calls of the three species. Furthermore, sympatric calls evoked weaker interest than allopatric advertisement calls. Conclusion Our results provide the first evidence for a specific relevance of social calls for speciation in cryptic primates. They furthermore support that specific differences in signalling and recognition systems represent an efficient premating isolation mechanism contributing to species cohesiveness in sympatrically living species.

  20. Evidence of constrained phenotypic evolution in a cryptic species complex of agamid lizards.

    Science.gov (United States)

    Smith, Katie L; Harmon, Luke J; Shoo, Luke P; Melville, Jane

    2011-04-01

    Lineages that exhibit little morphological change over time provide a unique opportunity to explore whether nonadaptive or adaptive processes explain the conservation of morphology over evolutionary time scales. We provide the most comprehensive evaluation to date of the evolutionary processes leading to morphological similarity among species in a cryptic species complex, incorporating two agamid lizard species (Diporiphora magna and D. bilineata). Phylogenetic analysis of mitochondrial (ND2) and nuclear (RAG-1) gene regions revealed the existence of eight deeply divergent clades. Analysis of morphological data confirmed the presence of cryptic species among these clades. Alternative evolutionary hypotheses for the morphological similarity of species were tested using a combination of phylogenetic, morphological, and ecological data. Likelihood model testing of morphological data suggested a history of constrained phenotypic evolution where lineages have a tendency to return to their medial state, whereas ecological data showed support for both Brownian motion and constrained evolution. Thus, there was an overriding signature of constrained evolution influencing morphological divergence between clades. Our study illustrates the utility of using a combination of phylogenetic, morphological, and ecological data to investigate evolutionary mechanisms maintaining cryptic species. © 2011 The Author(s). Evolution© 2011 The Society for the Study of Evolution.

  1. Taxonomic richness and abundance of cryptic peracarid crustaceans in the Puerto Morelos Reef National Park, Mexico.

    Science.gov (United States)

    Monroy-Velázquez, Luz Veronica; Rodríguez-Martínez, Rosa Elisa; Alvarez, Fernando

    2017-01-01

    Cryptic peracarids are an important component of the coral reef fauna in terms of diversity and abundance, yet they have been poorly studied. The aim of this study was to evaluate the taxonomic richness and abundance of cryptic peracarids in coral rubble in the Puerto Morelos Reef National Park, Mexico (PMRNP), and their relationship with depth. Three reef sites were selected: (1) Bonanza, (2) Bocana, and (3) Jardines. At each site six kilograms of coral rubble were collected over four sampling periods at three depths: 3 m (back-reef), 6-8 m (fore-reef), and 10-12 m (fore-reef). A total of 8,887 peracarid crustaceans belonging to 200 taxa distributed over five orders and 63 families was obtained; 70% of the taxa were identified to species and 25% to genus level. Fifty species of those collected represent new records for the Mexican Caribbean Sea. Isopoda was the most speciose order while Tanaidacea was the most abundant. Cryptic peracarid taxonomic richness and abundance were related to depth with higher values of both parameters being found in the shallow (3 m) back-reef, possibly due to a higher reef development and a greater accumulation of coral rubble produced during hurricanes. Peracarid data obtained in the present study can be used as a baseline for future monitoring programs in the PMRNP.

  2. Phylogeny and cryptic diversity in geckos (Phyllopezus; Phyllodactylidae; Gekkota) from South America's open biomes.

    Science.gov (United States)

    Gamble, Tony; Colli, Guarino R; Rodrigues, Miguel T; Werneck, Fernanda P; Simons, Andrew M

    2012-03-01

    The gecko genus Phyllopezus occurs across South America's open biomes: Cerrado, Seasonally Dry Tropical Forests (SDTF, including Caatinga), and Chaco. We generated a multi-gene dataset and estimated phylogenetic relationships among described Phyllopezus taxa and related species. We included exemplars from both described Phyllopezus pollicaris subspecies, P. p. pollicaris and P. p.przewalskii. Phylogenies from the concatenated data as well as species trees constructed from individual gene trees were largely congruent. All phylogeny reconstruction methods showed Bogertia lutzae as the sister species of Phyllopezus maranjonensis, rendering Phyllopezus paraphyletic. We synonymized the monotypic genus Bogertia with Phyllopezus to maintain a taxonomy that is isomorphic with phylogenetic history. We recovered multiple, deeply divergent, cryptic lineages within P. pollicaris. These cryptic lineages possessed mtDNA distances equivalent to distances among other gekkotan sister taxa. Described P. pollicaris subspecies are not reciprocally monophyletic and current subspecific taxonomy does not accurately reflect evolutionary relationships among cryptic lineages. We highlight the conservation significance of these results in light of the ongoing habitat loss in South America's open biomes. Copyright © 2011 Elsevier Inc. All rights reserved.

  3. Multiple cryptic species in the blue-spotted maskray (Myliobatoidei: Dasyatidae: Neotrygon spp.): An update.

    Science.gov (United States)

    Borsa, Philippe; Shen, Kang-Ning; Arlyza, Irma S; Hoareau, Thierry B

    2016-01-01

    Previous investigations have uncovered divergent mitochondrial clades within the blue-spotted maskray, previously Neotrygon kuhlii (Müller and Henle). The hypothesis that the blue-spotted maskray may consist of a complex of multiple cryptic species has been proposed, and four species have been recently described or resurrected. To test the multiple cryptic species hypothesis, we investigated the phylogenetic relationships and coalescence patterns of mitochondrial sequences in a sample of 127 new individuals from the Indian Ocean and the Coral Triangle region, sequenced at both the CO1 and cytochrome b loci. The maximum-likelihood (ML) tree of concatenated CO1+cytochrome b gene sequences, rooted by the New Caledonian maskray N. trigonoides, yielded 9 strongly supported, main clades. Puillandre's ABGD algorithm detected gaps in nucleotide distance consistent with the ML phylogeny. The general mixed Yule-coalescent algorithm partitioned the dataset into putative species generally consistent with the ML phylogeny. Nuclear markers generally confirmed that distinct mitochondrial clades correspond to genetically isolated lineages. The nine main lineages identified by ML analysis were geographically distributed in a parapatric fashion, indicating reproductive isolation. The hypothesis of multiple cryptic species is thus validated.

  4. Origin and development of the cryptic shoot meristem in Zeylanidium lichenoides (Podostemaceae).

    Science.gov (United States)

    Katayama, Natsu; Kato, Masahiro; Yamada, Toshihiro

    2013-04-01

    The shoot apical meristem is the source of aerial shoot systems. In the aquatic eudicot family Podostemaceae, subfamily Podostemoideae, however, shoots develop in the absence of a distinct apical meristem. Previous studies suggest that the cryptic embryonic shoot meristem is involved in primary shoot development in some species (e.g., Zeylanidium lichenoides), although it is unclear whether the meristem maintains meristematic identity. Our aim was to determine how an embryonic shoot meristem is established during embryogenesis and how it is involved in plumular leaf development in the seedling. We observed anatomy and analyzed gene expression in Z. lichenoides, using an ortholog of the shoot meristem marker gene SHOOT MERISTEMLESS (STM). Expression of the STM ortholog, ZlSTM, began in the apical part of the 16-cell embryo. By the heart-shaped embryo stage, its expression was restricted to the putative organizing center (OC) and the protodermal cells just above them, forming a cryptic embryonic shoot meristem without a typical stem cell (apical initials) layer. During seedling development, expression was not maintained in the meristem, but instead shifted to the adaxial bases of cotyledons where plumular leaves would form. ZlSTM expression demonstrated that the meristematic identity is partly retained in the embryonic shoot apex. This cryptic embryonic shoot meristem has a putative OC, but no typical stem cell layer, and it is not maintained during primary shoot development. Modification of the regulatory mechanism between the OC and stem cells might be responsible for this ephemeral shoot meristem in Podostemaceae.

  5. Diversity of sponges (Porifera) from cryptic habitats on the Belize barrier reef near Carrie Bow Cay.

    Science.gov (United States)

    Rützler, Klaus; Piantoni, Carla; Van Soest, Rob W M; Díaz, M Cristina

    2014-05-29

    The Caribbean barrier reef near Carrie Bow Cay, Belize, has been a focus of Smithsonian Institution (Washington) reef and mangrove investigations since the early 1970s. Systematics and biology of sponges (Porifera) were addressed by several researchers but none of the studies dealt with cryptic habitats, such as the shaded undersides of coral rubble, reef crevices, and caves, although a high species diversity was recognized and samples were taken for future reference and study. This paper is the result of processing samples taken between 1972 and 2012. In all, 122 species were identified, 14 of them new (including one new genus). The new species are Tetralophophora (new genus) mesoamericana, Geodia cribrata, Placospongia caribica, Prosuberites carriebowensis, Timea diplasterina, Timea oxyasterina, Rhaphidhistia belizensis, Wigginsia curlewensis, Phorbas aurantiacus, Myrmekioderma laminatum, Niphates arenata, Siphonodictyon occultum, Xestospongia purpurea, and Aplysina sciophila. We determined that about 75 of the 122 cryptic sponge species studied (61%) are exclusive members of the sciophilic community, 47 (39 %) occur in both, light-exposed and shaded or dark habitats. Since we estimate the previously known sponge population of Carrie Bow reefs and mangroves at about 200 species, the cryptic fauna makes up 38 % of total diversity.

  6. Carbohydrate Microarrays Identify Blood Group Precursor Cryptic Epitopes as Potential Immunological Targets of Breast Cancer

    Directory of Open Access Journals (Sweden)

    Denong Wang

    2015-01-01

    Full Text Available Using carbohydrate microarrays, we explored potential natural ligands of antitumor monoclonal antibody HAE3. This antibody was raised against a murine mammary tumor antigen but was found to cross-react with a number of human epithelial tumors in tissues. Our carbohydrate microarray analysis reveals that HAE3 is specific for an O-glycan cryptic epitope that is normally hidden in the cores of blood group substances. Using HAE3 to screen tumor cell surface markers by flow cytometry, we found that the HAE3 glycoepitope, gpHAE3, was highly expressed by a number of human breast cancer cell lines, including some triple-negative cancers that lack the estrogen, progesterone, and Her2/neu receptors. Taken together, we demonstrate that HAE3 recognizes a conserved cryptic glycoepitope of blood group precursors, which is nevertheless selectively expressed and surface-exposed in certain breast tumor cells. The potential of this class of O-glycan cryptic antigens in breast cancer subtyping and targeted immunotherapy warrants further investigation.

  7. A new method for colors characterization of colored stainless steel using CIE and Munsell color systems

    Science.gov (United States)

    Ji, Keming; Xue, Yongqiang; Cui, Zixiang

    2015-09-01

    It is important to establish an accurate and comprehensive method of characterizing colors of colored stainless steel and understand the changing mechanism and the regularity of colors for the research, production and application of colored stainless steel. In this work, the method which combines reflectance-wavelength with both CIE and Munsell color systems is studied, the changing regularity of hue, brightness and saturation with increasing coloring potential differences is investigated, and the mechanism of color changing is discussed. The results show that by using this method the colors of colored stainless steel can be accurately and comprehensively characterized; with coloring potential differences and colored film thickness increasing, the peaks and troughs of the reflectance curves in visible region move toward long wave, causing the cyclically changing of hue and brightness; the amplitude of reflectance curves increases, resulting in growing of the saturation; the CIE 1931 coordinate curve of colors counterclockwise and cyclically changes around the equal energy light spot.

  8. Cryptic or pseudocryptic: can morphological methods inform copepod taxonomy? An analysis of publications and a case study of the Eurytemora affinis species complex.

    Science.gov (United States)

    Lajus, Dmitry; Sukhikh, Natalia; Alekseev, Victor

    2015-06-01

    Interest in cryptic species has increased significantly with current progress in genetic methods. The large number of cryptic species suggests that the resolution of traditional morphological techniques may be insufficient for taxonomical research. However, some species now considered to be cryptic may, in fact, be designated pseudocryptic after close morphological examination. Thus the "cryptic or pseudocryptic" dilemma speaks to the resolution of morphological analysis and its utility for identifying species. We address this dilemma first by systematically reviewing data published from 1980 to 2013 on cryptic species of Copepoda and then by performing an in-depth morphological study of the former Eurytemora affinis complex of cryptic species. Analyzing the published data showed that, in 5 of 24 revisions eligible for systematic review, cryptic species assignment was based solely on the genetic variation of forms without detailed morphological analysis to confirm the assignment. Therefore, some newly described cryptic species might be designated pseudocryptic under more detailed morphological analysis as happened with Eurytemora affinis complex. Recent genetic analyses of the complex found high levels of heterogeneity without morphological differences; it is argued to be cryptic. However, next detailed morphological analyses allowed to describe a number of valid species. Our study, using deep statistical analyses usually not applied for new species describing, of this species complex confirmed considerable differences between former cryptic species. In particular, fluctuating asymmetry (FA), the random variation of left and right structures, was significantly different between forms and provided independent information about their status. Our work showed that multivariate statistical approaches, such as principal component analysis, can be powerful techniques for the morphological discrimination of cryptic taxons. Despite increasing cryptic species designations

  9. Naturally Colored Cotton

    Institute of Scientific and Technical Information of China (English)

    履之

    1994-01-01

    Instead of using dye to color cotton, an Arizona cotton breeder is letting nature do the work. Through crossbreeding, Sally Fox of Natural Cotton Colours in Wickenberg is creating plants that yield fiber in an array

  10. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... about the members of the eye-care team . Consumer warning about the improper use of colored contact ... About the Academy Jobs at the Academy Financial Relationships with Industry Medical Disclaimer Privacy Policy Terms of ...

  11. Colored Contact Lens Dangers

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    Full Text Available ... to my eye like a suction cup." Halloween is a popular time for people to use colored ... at Case Western Reserve University in Cleveland. "This is far from the truth." Real People, Real Problems ...

  12. Chemistry, Color, and Art.

    Science.gov (United States)

    Orna, Mary Virginia

    2001-01-01

    Describes pigments and artists' colors from a chronological perspective. Explains how chemical analysis can be used to distinguish the differences between artists' palettes, identify the evolution of art, and lead to restoration of an art work. (Contains 13 references.) (YDS)

  13. Colored Contact Lens Dangers

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    Full Text Available ... 000 per violation. "Many of the lenses found online or in beauty salons, novelty shops or in ... de contacto de color Find an Ophthalmologist Advanced Search Ask an Ophthalmologist Browse Answers Free Newsletter Get ...

  14. Colors of the Sky.

    Science.gov (United States)

    Bohren, Craig F.; Fraser, Alistair B.

    1985-01-01

    Explains the physical principles which result in various colors of the sky. Topics addressed include: blueness, mystical properties of water vapor, ozone, fluctuation theory of scattering, variation of purity and brightness, and red sunsets and sunrises. (DH)

  15. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... shop, but 10 hours after she first put in a pair of colored contact lenses, Laura Butler of Parkersburg, W.Va., had "extreme pain in both eyes," she said. "Because I had not ...

  16. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... Contact Lenses Without a Prescription Sep. 26, 2013 It started as an impulsive buy from a souvenir ... Can Ruin Vision Eye Makeup Safety In fact, it is illegal to sell colored contact lenses without ...

  17. Facts About Color Blindness

    Science.gov (United States)

    ... perception of its employees, such as graphic design, photography, and food quality inspection. The Farnsworth Lantern Test ... a green chalkboard when yellow chalk is used. Art classes, which require selecting appropriate colors of paint ...

  18. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... like a suction cup." Halloween is a popular time for people to use colored contact lenses to ... wear costume contact lenses for Halloween or any time of year, follow these guidelines: Get an eye ...

  19. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... Hidden Dangers of Buying Decorative Contact Lenses Without a Prescription Leer en Español: Peligros asociados con los ... contacto de color Sep. 26, 2013 It started as an impulsive buy from a souvenir shop, but ...

  20. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... lentes de contacto de color Find an ... Link your website to EyeSmart Embed EyeSmart videos on your website Promotional materials for eye health observances EyeSmart resources are also ...

  1. Food Coloring and Behavior

    OpenAIRE

    J Gordon Millichap

    1994-01-01

    The association between the ingestion of tartrazine synthetic food coloring and behavioral change in children referred for assessment of hyperactivity was investigated at the Royal Children’s Hospital, University of Melbourne, Australia.

  2. Colored Contact Lens Dangers

    Medline Plus

    Full Text Available ... popping touch. But colored contact lenses are popular year-round, not just at Halloween. But few know ... contact lenses for Halloween or any time of year, follow these guidelines: Get an eye exam from ...

  3. A Colorful Equatorial Wonderland

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    @@ Papua New Guinea (PNG) is one of the least visited countries in the world... a last frontier for international travelers. PNG is a colorful equatorial wonderland as well as a living example of human's culture 1000 years ago.

  4. Relighting multiple color textures

    Institute of Scientific and Technical Information of China (English)

    DIAO Chang-yu; LU Dong-ming; LIU Gang

    2005-01-01

    With the development of digital library technology, library books made of paper can be digital released and read, and Endangered Cultural Heritages can be preserved. Traditional library's contents and functions can be greatly enhanced by digital technologies. For these new library objects, the primary key problem is precisely reconstructing their 3D models. When constructing complete 3D models, multiple color texture maps are often necessary. A commonly encountered problem uncounted during fusing of textures from multiple color images is color distortion. Each texture of a single 3D model may be obtained under possibly different lighting conditions and color response of the camera. To remove any visible seam and improve color consistency between the textures while avoiding color distortion, we propose a new efficient algorithm to relight all the texture images globally,spread residual light difference, and recolor each image by homogeneous transformation. A relative illumination model was adopted to obtain the relighting function. We choose lαβ color space with minimal correlation between channels for many natural scenes, for calculating the relighting result. Looking into two overlapped images A and B, we can pairwise relight B into A's luminosity condition in two steps. We first scale B's l channel by the lA/lB ratio of the overlapped region. We can assume A and B are in a same color plane now. Then a homogeneous transformation is applied to B's α and β channels which moves B into A's hue and saturation condition. For multiple overlapped color textures, a patch based weighted global relighting method was proposed to minimize the total color difference. The pairwise relighting method was used between each two overlapped images, and the difference in every overlapped region after relighting was weighted and summed up to construct an energy value. We used Nelder-Mead method to find a minimal energy value and the relighting parameters for every image. After

  5. Color Blind Affirmative Action

    OpenAIRE

    2003-01-01

    This paper presents a conceptual framework for understanding the consequences of the widespread adoption of race-neutral alternatives' to conventional racial affirmative action policies in college admissions. A simple model of applicant competition with endogenous effort is utilized to show that, in comparison to color-conscious affirmative action, these color-blind alternatives can significantly lower the efficiency of the student selection process in equilibrium. We examine data on matricul...

  6. The Computation of Color

    Science.gov (United States)

    1989-09-01

    patches of random colors, named Mondrians after the twentieth-century Dutch painter Piet Mondrian . In one demon- stration, Land illuminates a Mondrian with...Hsien-Che Lee, for his meticulous reading of thesis drafts, insights into color science, and inspiring collaboration on the " Mondrian -sphere" ex...Heinrich for his es- sential contributions to the " Mondrian -spheres" experiments. Special thanks to Nikos for the hours and hours he spent helping me

  7. Static Filtered Sky Color Constancy

    Directory of Open Access Journals (Sweden)

    Ali Alkhalifah

    2016-05-01

    Full Text Available In Computer Vision, the sky color is used for lighting correction, image color enhancement, horizon alignment, image indexing, and outdoor image classification and in many other applications. In this article, for robust color based sky segmentation and detection, usage of lighting correction for sky color detection is investigated. As such, the impact of color constancy on sky color detection algorithms is evaluated and investigated. The color correction (constancy algorithms used includes Gray-Edge (GE, Gray-World (GW, Max-RGB (MRGB and Shades-of-Gray (SG. The algorithms GE, GW, MRGB, and SG, are tested on the static filtered sky modeling. The static filter is developed in the LAB color space. This evaluation and analysis is essential for detection scenarios, especially, color based object detection in outdoor scenes. From the results, it is concluded that the color constancy before sky color detection using LAB static filters has the potential of improving sky color detection performance. However, the application of the color constancy can impart adverse effects on the detection results. For images, the color constancy algorithms depict a compact and stable representative of the sky chroma loci, however, the sky color locus might have a shifting and deviation in a particular color representation. Since the sky static filters are using the static chromatic values, different results can be obtained by applying color constancy algorithms on various datasets.

  8. Novikov Color Algebra and Tortken Color Algebra%Novikov Color 代数与 Tortken Color 代数

    Institute of Scientific and Technical Information of China (English)

    高秀娟; 徐丽媛

    2016-01-01

    Three concepts of Novikov color algebra,Tortken color algebra and Jordan color algebra were defined,then the relations among three algebras were discussed.We gave the basic properties of Novikov color algebra and Tortken color algebra.Then we proved a Tortken color algebra with an identity element is both associative and color commutative.We also showed how to use Novikov color algebra to construct a Tortken color algebra.%给出 Novikov color 代数、Tortken color 和 Jordan color 代数的定义,并讨论它们之间的关系,证明了有单位元的 Tortken color 代数是结合的,也是 color 交换的。给出 Novikov color 代数和 Tortken color 代数的基本性质以及利用 Novikov color 代数构造 Tortken color代数的方法。

  9. Color planner for designers based on color emotions

    Science.gov (United States)

    Cheng, Ka-Man; Xin, John H.; Taylor, Gail

    2002-06-01

    During the color perception process, an associated feeling or emotion is induced in our brains, and this kind of emotion is termed as 'color emotion.' The researchers in the field of color emotions have put many efforts in quantifying color emotions with the standard color specifications and evaluating the influence of hue, lightness and chroma to the color emotions of human beings. In this study, a color planner was derived according to these findings so that the correlation of color emotions and standard color specifications was clearly indicated. Since people of different nationalities usually have different color emotions as different cultural and traditional backgrounds, the subjects in this study were all native Hong Kong Chinese and the color emotion words were all written in Chinese language in the visual assessments. Through the color planner, the designers from different areas, no matter fashion, graphic, interior or web site etc., can select suitable colors for inducing target color emotions to the customers or product-users since different colors convey different meanings to them. In addition, the designers can enhance the functionality and increase the attractiveness of their designed products by selecting suitable colors.

  10. Luminance contours can gate afterimage colors and 'real' colors

    NARCIS (Netherlands)

    Anstis, S.; Vergeer, M.L.T.; Lier, R.J. van

    2012-01-01

    It has long been known that colored images may elicit afterimages in complementary colors. We have already shown (Van Lier, Vergeer, & Anstis, 2009) that one and the same adapting image may result in different afterimage colors, depending on the test contours presented after the colored image. The c

  11. CD4+ T cells targeting dominant and cryptic epitopes from Bacillus anthracis Lethal Factor

    Directory of Open Access Journals (Sweden)

    Stephanie eAscough

    2016-01-01

    Full Text Available Anthrax is an endemic infection in many countries, particularly in the developing world. The causative agent, Bacillus anthracis, mediates disease through the secretion of binary exotoxins. Until recently, research into adaptive immunity targeting this bacterial pathogen has largely focused on the humoral response to these toxins. There is, however, growing recognition that cellular immune responses involving IFNγ producing CD4+ T cells also contribute significantly to a protective memory response. An established concept in adaptive immunity to infection is that during infection of host cells, new microbial epitopes may be revealed, leading to immune recognition of so called ‘cryptic’ or ‘subdominant’ epitopes. We analysed the response to both cryptic and immunodominant T cell epitopes derived from the toxin component lethal factor and presented by a range of HLA-DR alleles. Using IFNγ-ELISPOT assays we characterised epitopes that elicited a response following immunisation with synthetic peptide and the whole protein and tested their capacities to bind purified HLA-DR molecules in vitro. We found that DR1 transgenics demonstrated T cell responses to a greater number of domain III cryptic epitopes than other HLA-DR transgenics, and that this pattern was repeated with the immunodominant epitopes, a greater proportion of these epitopes induced a T cell response when presented within the context of the whole protein. Immunodominant epitopes LF457-476 and LF467-487 were found to induce a T cell response to the peptide, as well as to the whole native LF protein in DR1 and DR15, but not in DR4 trangenics. The analysis of Domain I revealed the presence of several unique cryptic epitopes all of which showed a strong to moderate relative binding affinity to HLA-DR4 molecules. However, none of the cryptic epitopes from either domain III or I displayed notably high binding affinities across all HLA-DR alleles assayed. These responses were

  12. Color measurement and discrimination

    Science.gov (United States)

    Wandell, B. A.

    1985-01-01

    Theories of color measurement attempt to provide a quantative means for predicting whether two lights will be discriminable to an average observer. All color measurement theories can be characterized as follows: suppose lights a and b evoke responses from three color channels characterized as vectors, v(a) and v(b); the vector difference v(a) - v(b) corresponds to a set of channel responses that would be generated by some real light, call it *. According to theory a and b will be discriminable when * is detectable. A detailed development and test of the classic color measurement approach are reported. In the absence of a luminance component in the test stimuli, a and b, the theory holds well. In the presence of a luminance component, the theory is clearly false. When a luminance component is present discrimination judgements depend largely on whether the lights being discriminated fall in separate, categorical regions of color space. The results suggest that sensory estimation of surface color uses different methods, and the choice of method depends upon properties of the image. When there is significant luminance variation a categorical method is used, while in the absence of significant luminance variation judgments are continuous and consistant with the measurement approach.

  13. Black Twin Colors on Topographics Maps in Digital Print

    Directory of Open Access Journals (Sweden)

    Maja Matas

    2015-03-01

    Full Text Available Spot dyes join the double feature of the INFRAREDESIGN® theory. A large number of planned colors in graphics of topographic maps, are simulated in the press with only four process colorants. Achieved are seperated infromation for the visible and infrared spectrum. This introduces the protection of printed matter, protection of property, reduces the cost of spot printing of large numbers of layers. For the digital print technology simulation of the merge of "topographical colors" is extended to achieve Infrared graphics. The black color tone, a typical color in cartography, is associated with two dyes with different compositions and different properties in the infrared spectrum. Black twins are programmed for the digital printing form for the printing with CMYK process components, and according to the IRD® procedure.

  14. Museum lighting for golden artifacts, with low correlated color temperature, high color uniformity and high color rendering index, using diffusing color mixing of red, cyan, and white-light-emitting diodes

    DEFF Research Database (Denmark)

    Thorseth, Anders; Corell, Dennis Dan; Poulsen, Peter Behrensdorff

    2012-01-01

    at the Royal Danish Collection at Rosenborg Castle. Color mixing of red, cyan, and white LEDs was employed to achieve the spectral power distribution needed for the required CCT and a CRI above 90. Color uniformity is achieved by the use of a highly diffusing reflector. The system has shown energy saving above......Museum lighting presents challenges mainly due to the demand for precise color rendering and the damaging effects of radiation. Golden objects must normally be illuminated by the non-standard CCT of 2200 K. An LED system that conforms to these requirements has been developed and implemented...

  15. Color face recognition based on steerable pyramid transform and extreme learning machines.

    Science.gov (United States)

    Uçar, Ayşegül

    2014-01-01

    This paper presents a novel color face recognition algorithm by means of fusing color and local information. The proposed algorithm fuses the multiple features derived from different color spaces. Multiorientation and multiscale information relating to the color face features are extracted by applying Steerable Pyramid Transform (SPT) to the local face regions. In this paper, the new three hybrid color spaces, YSCr, ZnSCr, and BnSCr, are firstly constructed using the Cb and Cr component images of the YCbCr color space, the S color component of the HSV color spaces, and the Zn and Bn color components of the normalized XYZ color space. Secondly, the color component face images are partitioned into the local patches. Thirdly, SPT is applied to local face regions and some statistical features are extracted. Fourthly, all features are fused according to decision fusion frame and the combinations of Extreme Learning Machines classifiers are applied to achieve color face recognition with fast and high correctness. The experiments show that the proposed Local Color Steerable Pyramid Transform (LCSPT) face recognition algorithm improves seriously face recognition performance by using the new color spaces compared to the conventional and some hybrid ones. Furthermore, it achieves faster recognition compared with state-of-the-art studies.

  16. Color Face Recognition Based on Steerable Pyramid Transform and Extreme Learning Machines

    Directory of Open Access Journals (Sweden)

    Ayşegül Uçar

    2014-01-01

    Full Text Available This paper presents a novel color face recognition algorithm by means of fusing color and local information. The proposed algorithm fuses the multiple features derived from different color spaces. Multiorientation and multiscale information relating to the color face features are extracted by applying Steerable Pyramid Transform (SPT to the local face regions. In this paper, the new three hybrid color spaces, YSCr, ZnSCr, and BnSCr, are firstly constructed using the Cb and Cr component images of the YCbCr color space, the S color component of the HSV color spaces, and the Zn and Bn color components of the normalized XYZ color space. Secondly, the color component face images are partitioned into the local patches. Thirdly, SPT is applied to local face regions and some statistical features are extracted. Fourthly, all features are fused according to decision fusion frame and the combinations of Extreme Learning Machines classifiers are applied to achieve color face recognition with fast and high correctness. The experiments show that the proposed Local Color Steerable Pyramid Transform (LCSPT face recognition algorithm improves seriously face recognition performance by using the new color spaces compared to the conventional and some hybrid ones. Furthermore, it achieves faster recognition compared with state-of-the-art studies.

  17. Color Addition and Subtraction Apps

    Science.gov (United States)

    Ruiz, Frances; Ruiz, Michael J.

    2015-10-01

    Color addition and subtraction apps in HTML5 have been developed for students as an online hands-on experience so that they can more easily master principles introduced through traditional classroom demonstrations. The evolution of the additive RGB color model is traced through the early IBM color adapters so that students can proceed step by step in understanding mathematical representations of RGB color. Finally, color addition and subtraction are presented for the X11 colors from web design to illustrate yet another real-life application of color mixing.

  18. Achievement report for fiscal 1998. Research and development on a new manufacturing method for functional thin films suitable for recycling, and their application to colored glasses (the second year); 1998 nendo seika hokokusho. Recycle ni tekishita kinosei usumaku no shinki seizoho to chakushoku glass eno oyo ni kansuru kenkyu kaihatsu (dai 2 nendo)

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-03-01

    A new thin film manufacturing method is established to add a function to glass material surface, as a new material technology which harmonizes with global environment, and is suitable for resource re-utilization and energy conservation. It is intended to develop a leading technology to promote recycling of colored glasses by applying this technical method to colored glasses. Fiscal 1998 has implemented subsequently to fiscal 1997 the following subjects in the three research items composed of a new manufacturing method of functional thin films, application of the functional thin films to colored glasses, and the comprehensive investigative studies: establishment of an industrial manufacturing method for color coating liquid and evaluation of basic characteristics of the colored functional thin films, optimization of element technology for photo-sensitive gel films by means of chemically modifying metallic alkoxide, tests of forming films on glass bottles and plate glasses by using a coating machine installed in fiscal 1997, design and prototype fabrication of a new demonstration coating machine, and analysis on thermal decomposition of the colored thin films. Optimization was performed on the element technology for manufacturing sol-gel functional thin films, and a survey was carried out on recycling systems of colored glasses adopted in Europe. (NEDO)

  19. Optical/digital color photography based on white-light information processing

    Institute of Scientific and Technical Information of China (English)

    罗罡; 刘福来; 林列; 方志良; 王肇圻; 母国光; 翁志成

    2001-01-01

    The achievement in optical/digital color photography based on white-light information processing including the color-encoding camera, the color image decoder, the integral window Fourier algorithm of the Fourier transform in digital decoding, the color correction of the retrieval color image and the fusion of zero order diffraction is reported. This technique has found its important applications in the fields of aerial reconnaissance photography and far-distance ground photography due to its features of large information capacity, convenience in archival storage, the capability of color enhancement, particularly easy transportation by Internet.

  20. Artificial color perception using microwaves

    CERN Document Server

    Choudhury, Debesh

    2013-01-01

    We report the feasibility of artificial color perception under microwave illumination using a standard microwave source and an antenna. We have sensed transmitted microwave power through color objects and have distinguished the colors by analyzing the sensed transmitted power. Experiments are carried out using a Gunn diode as the microwave source, some colored liquids as the objects and a microwave diode as the detector. Results are presented which open up an unusual but new way of perceiving colors using microwaves.

  1. Closing the Achievement Gap: Four States' Efforts

    Science.gov (United States)

    Wixom, Micah Ann

    2015-01-01

    The achievement gap separating economically disadvantaged students from their more advantaged peers disproportionately affects students of color and has been the focus of discussion, research and controversy for more than 40 years. While the gap between black and white students narrowed considerably from the 1950s to the 1980s, that gap has…

  2. Precision of Synesthetic Color Matching Resembles That for Recollected Colors Rather than Physical Colors

    Science.gov (United States)

    Arnold, Derek H.; Wegener, Signy V.; Brown, Francesca; Mattingley, Jason B.

    2012-01-01

    Grapheme-color synesthesia is an atypical condition in which individuals experience sensations of color when reading printed graphemes such as letters and digits. For some grapheme-color synesthetes, seeing a printed grapheme triggers a sensation of color, but "hearing" the name of a grapheme does not. This dissociation allowed us to…

  3. Precision of Synesthetic Color Matching Resembles That for Recollected Colors Rather than Physical Colors

    Science.gov (United States)

    Arnold, Derek H.; Wegener, Signy V.; Brown, Francesca; Mattingley, Jason B.

    2012-01-01

    Grapheme-color synesthesia is an atypical condition in which individuals experience sensations of color when reading printed graphemes such as letters and digits. For some grapheme-color synesthetes, seeing a printed grapheme triggers a sensation of color, but "hearing" the name of a grapheme does not. This dissociation allowed us to…

  4. Color Memory of University Students: Influence of Color Experience and Color Characteristic

    Science.gov (United States)

    Bynum, Carlisle; Epps, Helen H.; Kaya, Naz

    2006-01-01

    The ability to select a previously viewed color specimen from an array of specimens that differ in hue, value, or chroma varies among individuals, and may be related to one's basic color discrimination ability or to prior experience with color. This study investigated short-term color memory of 40 college students, 20 of whom were interior design…

  5. Cryptic diversity in the Japanese mantis shrimp Oratosquilla oratoria (Crustacea: Squillidae): Allopatric diversification, secondary contact and hybridization.

    Science.gov (United States)

    Cheng, Jiao; Sha, Zhong-Li

    2017-05-16

    Mounting evidence of cryptic species in the marine realm emphasizes the necessity to thoroughly revise our current perceptions of marine biodiversity and species distributions. Here, we used mitochondrial cytochrome oxidase subunit I (mtDNA COI) and nuclear ribosomal internal transcribed spacer (nrDNA ITS) to investigate cryptic diversity and potential hybridization in the Japanese mantis shrimp Oratosquilla oratoria in the Northwestern (NW) Pacific. Both mitochondrial and nuclear gene genealogies revealed two cryptic species in this morphotaxon, which was further confirmed by extensive population-level analyses. One cryptic species is restricted to cold waters with a distribution range corresponding to temperate affinities, while the other dwelled warm waters influenced by the Kuroshio Current. Their divergence was postulated to be attributable to the vicariant event which resulted from the isolation of the Sea of Japan during the middle Pliocene (c. 3.85 Mya, 95% HPD 2.23-6.07 Mya). Allopatric speciation was maintained by limited genetic exchange due to their habitat preferences. Furthermore, the observation of recombinant nrDNA ITS sequence and intra-individual ITS polymorphism suggested recent hybridization event of the two cryptic species occurred in sympatric areas. Our study also illustrated that the Changjiang River outflow might act as an oceanic barrier to gene flow and promoted allopatric diversification in O. oratoria species complex.

  6. The color "fruit": object memories defined by color.

    Science.gov (United States)

    Lewis, David E; Pearson, Joel; Khuu, Sieu K

    2013-01-01

    Most fruits and other highly color-diagnostic objects have color as a central aspect of their identity, which can facilitate detection and visual recognition. It has been theorized that there may be a large amount of overlap between the neural representations of these objects and processing involved in color perception. In accordance with this theory we sought to determine if the recognition of highly color diagnostic fruit objects could be facilitated by the visual presentation of their known color associates. In two experiments we show that color associate priming is possible, but contingent upon multiple factors. Color priming was found to be maximally effective for the most highly color diagnostic fruits, when low spatial-frequency information was present in the image, and when determination of the object's specific identity, not merely its category, was required. These data illustrate the importance of color for determining the identity of certain objects, and support the theory that object knowledge involves sensory specific systems.

  7. Color control of the multi-color printing device

    Institute of Scientific and Technical Information of China (English)

    WANG Xiao-hua; XIU Xiao-jie; ZHU Wen-hua; TANG Hong-jun

    2006-01-01

    Conventional color-printing systems often use inks of three hues, such as CMY, CMYK and CMYKLcLm, but in order to obtain more realistic color reproductions, the ink set of more than three hues has been adopted by some color-printing systems. It is difficult, however, to model the composed color with the multiple inks when the number of the output ink hues exceeds three due to the none-unique mapping between the color spaces of the CIE Lab and the multi-color printing device. In this paper, we propose a fine color-printing method for multi-color printing device with the ink set of more than three hues. The proposed approach has good color expression ability and provides fine control of the printed color. By dividing the output color space into several subspaces, our method allows one-to-one mapping between the standard color space and the multi-color output color space. It has been proved effective when applied to the digital inkjet printer-Mutoh8000.

  8. Visual modeling reveals cryptic aspect in egg mimicry of Himalayan Cuckoo (Cuculus saturatus) on its host Blyth's Leaf Warbler (Phylloscopus reguloides).

    Science.gov (United States)

    Yang, Can-Chao; Cai, Yan; Liang, Wei

    2011-08-01

    Brood parasitism and egg mimicry of Himalayan Cuckoo (Cuculus saturatus) on its host Blyth's Leaf Warbler (Phylloscopus reguloides) were studied in south-western China from April to July 2009. The cuckoo laid a white egg with fine brown markings on the blunt end. The eggs were conspicuously bigger than the host's own, with 2.06 g in mass and 1.91 cm(3) in volume. Visual modeling showed that the cuckoo eggs, which from the human eye appeared to mimic the host eggs to a great extent, were completely different from the host eggs in both hue and chroma. The characters of the Himalayan Cuckoo nestling, reported for the first time, included two triangular and black patches on its gape, which appeared from four days old and became darker with age and growth. While this character also exists in nestlings of Oriental Cuckoo (C. optatus), it has not been found for other Cuculus species. Our results reveal cryptic aspects in the cuckoo-host egg color matching, which are not visible to the naked human eye, and indicate that high mimetic cuckoo eggs rejected by hosts, as determined by human observers in previous studies, might not be mimetic as birds see them.

  9. Phylogenetic relationships of geckos of the Hemiphyllodactylus harterti group, a new species from Penang Island, Peninsular Malaysia, and a likely case of true cryptic speciation.

    Science.gov (United States)

    Cobos, Anthony; Grismer, L Lee; Wood, Perry L; Quah, Evan S H; Anuar, Shahrul; Muin, Mohd Abdul

    2016-05-03

    An integrative taxonomic analysis based on the mitochondrial gene ND2 and its flanking tRNAs, morphology, and color pattern indicates that a newly discovered gecko described herein as Hemiphyllodactylus cicak sp. nov. from Penang Hill on the Island of Penang, Peninsular Malaysia is a member of the H. harterti group. Hemiphyllodactylus cicak sp. nov. is most closely related to the clade composed of the sister species H. harterti from Bukit Larut, Perak in the Bintang Mountain Range and H. bintik from Gunung Tebu, Terengganu from the Timur Mountain Range. These three allopatric species form a monophyletic group that extends approximately 270 km across three isolated mountain ranges in northern Peninsular Malaysia. The molecular analysis also indicates that H. titiwangsaensis from the Titiwangsa Mountain Range is composed of three genetically distinct allopatric populations. The southern two populations from Fraser's Hill and Genting Highlands, Pahang have an uncorrected pairwise sequence divergence of 3.5% whereas these two populations have 12.4 and 12.8 % sequence divergences, respectively, from the northern population at Cameron Highlands, Pahang. Although the high sequence divergence clearly distinguishes the southern two populations from the former as a different species, all three populations are morphologically indistinguishable, leading to the hypothesis of a true, cryptic speciation event.

  10. [Study progress of spectral color science and its prospect of application in the field of Chinese medicine].

    Science.gov (United States)

    Yin, Fang-zhou; Wu, Xiao-yan; Mao, Chun-qing; Ji, De; Cai, Bao-chang; Lu, Tu-lin

    2013-09-01

    The paper reviewed the research progress in the spectral color science, including the common model, color measurement instrument in recent years, application of color measurement technology in agriculture, food, industry, medicine and other fields. The possibility to achieve the color quantization of Chinese medicine was explored by color measurement technology, and analyzed its application prospect in the field of Chinese medicine, provided a model for the study on quality control for Chinese medicine non-destructive online

  11. The biology of color.

    Science.gov (United States)

    Cuthill, Innes C; Allen, William L; Arbuckle, Kevin; Caspers, Barbara; Chaplin, George; Hauber, Mark E; Hill, Geoffrey E; Jablonski, Nina G; Jiggins, Chris D; Kelber, Almut; Mappes, Johanna; Marshall, Justin; Merrill, Richard; Osorio, Daniel; Prum, Richard; Roberts, Nicholas W; Roulin, Alexandre; Rowland, Hannah M; Sherratt, Thomas N; Skelhorn, John; Speed, Michael P; Stevens, Martin; Stoddard, Mary Caswell; Stuart-Fox, Devi; Talas, Laszlo; Tibbetts, Elizabeth; Caro, Tim

    2017-08-04

    Coloration mediates the relationship between an organism and its environment in important ways, including social signaling, antipredator defenses, parasitic exploitation, thermoregulation, and protection from ultraviolet light, microbes, and abrasion. Methodological breakthroughs are accelerating knowledge of the processes underlying both the production of animal coloration and its perception, experiments are advancing understanding of mechanism and function, and measurements of color collected noninvasively and at a global scale are opening windows to evolutionary dynamics more generally. Here we provide a roadmap of these advances and identify hitherto unrecognized challenges for this multi- and interdisciplinary field. Copyright © 2017 The Authors, some rights reserved; exclusive licensee American Association for the Advancement of Science. No claim to original U.S. Government Works.

  12. Plate Full of Color

    Centers for Disease Control (CDC) Podcasts

    2008-08-04

    The Eagle Books are a series of four books that are brought to life by wise animal characters - Mr. Eagle, Miss Rabbit, and Coyote - who engage Rain That Dances and his young friends in the joy of physical activity, eating healthy foods, and learning from their elders about health and diabetes prevention. Plate Full of Color teaches the value of eating a variety of colorful and healthy foods.  Created: 8/4/2008 by National Center for Chronic Disease Prevention and Health Promotion (NCCDPHP).   Date Released: 8/5/2008.

  13. Future of color

    Science.gov (United States)

    Ladson, Jack A.; Turner, Laraine B.; Green-Armytage, Paul; Hunt, Robert W. G.

    2002-06-01

    We live in a world in which styles and technologies are nearly the same from place to place, but change daily. This changing global culture is unprecedented, and reinforced by emerging new technologies that affect us all. The Future of Color, examines new technologies, how they will affect the selection and promulgation of color in the near future, and their impact upon us. We examine this topic from many perspectives - technological, business and commercial. Most importantly, as we understand how our world is emerging, we can position ourselves strategically for tomorrow.

  14. An ancient icon reveals new mysteries: mummy DNA resurrects a cryptic species within the Nile crocodile.

    Science.gov (United States)

    Hekkala, Evon; Shirley, Matthew H; Amato, George; Austin, James D; Charter, Suellen; Thorbjarnarson, John; Vliet, Kent A; Houck, Marlys L; Desalle, Rob; Blum, Michael J

    2011-10-01

    The Nile crocodile (Crocodylus niloticus) is an ancient icon of both cultural and scientific interest. The species is emblematic of the great civilizations of the Nile River valley and serves as a model for international wildlife conservation. Despite its familiarity, a centuries-long dispute over the taxonomic status of the Nile crocodile remains unresolved. This dispute not only confounds our understanding of the origins and biogeography of the 'true crocodiles' of the crown genus Crocodylus, but also complicates conservation and management of this commercially valuable species. We have taken a total evidence approach involving phylogenetic analysis of mitochondrial and nuclear markers, as well as karyotype analysis of chromosome number and structure, to assess the monophyletic status of the Nile crocodile. Samples were collected from throughout Africa, covering all major bioregions. We also utilized specimens from museum collections, including mummified crocodiles from the ancient Egyptian temples at Thebes and the Grottes de Samoun, to reconstruct the genetic profiles of extirpated populations. Our analyses reveal a cryptic evolutionary lineage within the Nile crocodile that elucidates the biogeographic history of the genus and clarifies long-standing arguments over the species' taxonomic identity and conservation status. An examination of crocodile mummy haplotypes indicates that the cryptic lineage corresponds to an earlier description of C. suchus and suggests that both African Crocodylus lineages historically inhabited the Nile River. Recent survey efforts indicate that C. suchus is declining or extirpated throughout much of its distribution. Without proper recognition of this cryptic species, current sustainable use-based management policies for the Nile crocodile may do more harm than good.

  15. The carotenoid-continuum: carotenoid-based plumage ranges from conspicuous to cryptic and back again

    Directory of Open Access Journals (Sweden)

    Roberts Mark L

    2010-05-01

    Full Text Available Abstract Background Carotenoids are frequently used by birds to colour their plumage with green, yellow, orange or red hues, and carotenoid-based colours are considered honest signals of quality, although they may have other functions, such as crypsis. It is usually assumed that red through yellow colours have a signalling function while green is cryptic. Here we challenge this notion using the yellow and green colouration of blue tits (Cyanistes caeruleus, great tits (Parus major and greenfinches (Carduelis chloris as a model. Results The relationship between colouration (chroma, computed using visual sensitivities of conspecifics and detectability (contrast against natural backgrounds as perceived by conspecifics and avian predators followed a similar curvilinear pattern for yellow and green plumage with minimum detectability at intermediate levels of carotenoid deposition. Thus, for yellow and green plumage, colours at or close to the point of minimum detectability may aid in crypsis. This may be the case for blue and great tit green and yellow plumage, and greenfinch green plumage, all of which had comparably low levels of detectability, while greenfinch yellow plumage was more chromatic and detectable. As yellow and green blue tit colouration are strongly affected by carotenoid availability during moult, variation in pigment availability between habitats may affect the degree of background-matching or the costliness of producing cryptic plumage. Conclusions Increasing carotenoid-deposition in the integument does not always lead to more conspicuous colours. In some cases, such as in blue or great tits, carotenoid deposition may be selected through enhanced background-matching, which in turn suggests that producing cryptic plumage may entail costs. We stress however, that our data do not rule out a signalling function of carotenoid-based plumage in tits. Rather, it shows that alternative functions are plausible and that assuming a signalling

  16. Cryptic species? Patterns of maternal and paternal gene flow in eight neotropical bats.

    Directory of Open Access Journals (Sweden)

    Elizabeth L Clare

    Full Text Available Levels of sequence divergence at mitochondrial loci are frequently used in phylogeographic analysis and species delimitation though single marker systems cannot assess bi-parental gene flow. In this investigation I compare the phylogeographic patterns revealed through the maternally inherited mitochondrial COI region and the paternally inherited 7(th intron region of the Dby gene on the Y-chromosome in eight common Neotropical bat species. These species are diverse and include members of two families from the feeding guilds of sanguivores, nectarivores, frugivores, carnivores and insectivores. In each case, the currently recognized taxon is comprised of distinct, substantially divergent intraspecific mitochondrial lineages suggesting cryptic species complexes. In Chrotopterus auritus, and Saccopteryx bilineata I observed congruent patterns of divergence in both genetic regions suggesting a cessation of gene flow between intraspecific groups. This evidence supports the existence of cryptic species complexes which meet the criteria of the genetic species concept. In Glossophaga soricina two intraspecific groups with largely sympatric South American ranges show evidence for incomplete lineage sorting or frequent hybridization while a third group with a Central American distribution appears to diverge congruently at both loci suggesting speciation. Within Desmodus rotundus and Trachops cirrhosus the paternally inherited region was monomorphic and thus does not support or refute the potential for cryptic speciation. In Uroderma bilobatum, Micronycteris megalotis and Platyrrhinus helleri the gene regions show conflicting patterns of divergence and I cannot exclude ongoing gene flow between intraspecific groups. This analysis provides a comprehensive comparison across taxa and employs both maternally and paternally inherited gene regions to validate patterns of gene flow. I present evidence for previously unrecognized species meeting the criteria of

  17. Please mind the gap - Visual census and cryptic biodiversity assessment at central Red Sea coral reefs.

    Science.gov (United States)

    Pearman, John K; Anlauf, Holger; Irigoien, Xabier; Carvalho, Susana

    2016-07-01

    Coral reefs harbor the most diverse assemblages in the ocean, however, a large proportion of the diversity is cryptic and, therefore, undetected by standard visual census techniques. Cryptic and exposed communities differ considerably in species composition and ecological function. This study compares three different coral reef assessment protocols: i) visual benthic reef surveys: ii) visual census of Autonomous Reef Monitoring Structures (ARMS) plates; and iii) metabarcoding techniques of the ARMS (including sessile, 106-500 μm and 500-2000 μm size fractions), that target the cryptic and exposed communities of three reefs in the central Red Sea. Visual census showed a dominance of Cnidaria (Anthozoa) and Rhodophyta on the reef substrate, while Porifera, Bryozoa and Rhodophyta were the most abundant groups on the ARMS plates. Metabarcoding, targeting the 18S rRNA gene, significantly increased estimates of the species diversity (p reefs. Furthermore, metabarcoding detected microbial eukaryotic groups such as Syndiniophyceae, Mamiellophyceae and Bacillariophyceae as relevant components of the sessile fraction. ANOSIM analysis showed that the three reef sites showed no differences based on the visual census data. Metabarcoding showed a higher sensitivity for identifying differences between reef communities at smaller geographic scales than standard visual census techniques as significant differences in the assemblages were observed amongst the reefs. Comparison of the techniques showed no similar patterns for the visual techniques while the metabarcoding of the ARMS showed similar patterns amongst fractions. Establishing ARMS as a standard tool in reef monitoring will not only advance our understanding of local processes and ecological community response to environmental changes, as different faunal components will provide complementary information but also improve the estimates of biodiversity in coral reef benthic communities. This study lays the foundations

  18. The Grounded Expertise Components Approach in the novel area of cryptic crossword solving

    Directory of Open Access Journals (Sweden)

    Kathryn J Friedlander

    2016-05-01

    Full Text Available This paper presents a relatively unexplored area of expertise research which focuses on the solving of British-style cryptic crossword puzzles. Unlike its American ‘straight-definition’ counterparts, which are primarily semantically-cued retrieval tasks, the British cryptic crossword is an exercise in code-cracking detection work. Solvers learn to ignore the superficial ‘surface reading’ of the clue, which is phrased to be deliberately misleading, and look instead for a grammatical set of coded instructions which, if executed precisely, will lead to the correct (and only answer. Sample clues are set out to illustrate the task requirements and demands. Hypothesized aptitudes for the field might include high fluid intelligence, skill at quasi-algebraic puzzles, pattern matching, visuospatial manipulation, divergent thinking and breaking frame abilities. These skills are additional to the crystallized knowledge and word-retrieval demands which are also a feature of American crossword puzzles. The authors present results from an exploratory survey intended to identify the characteristics of the cryptic crossword solving population, and outline the impact of these results on the direction of their subsequent research. Survey results were strongly supportive of a number of hypothesized skill-sets and guided the selection of appropriate test content and research paradigms which formed the basis of an extensive research program to be reported elsewhere. The paper concludes by arguing the case for a more grounded approach to expertise studies, termed the Grounded Expertise Components Approach. In this, the design and scope of the empirical program flows from a detailed and objectively-based characterization of the research population at the very onset of the program.

  19. Developmental plasticity and the origin of novel forms: unveiling cryptic genetic variation via "use and disuse".

    Science.gov (United States)

    Palmer, A Richard

    2012-09-01

    Natural selection eliminates phenotypic variation from populations, generation after generation-an observation that haunted Darwin. So, how does new phenotypic variation arise, and is it always random with respect to fitness? Repeated behavioral responses to a novel environment-particularly those that are learned-are typically advantageous. If those behaviors yield more extreme or novel morphological variants via developmental plasticity, then previously cryptic genetic variation may be exposed to natural selection. Significantly, because the mean phenotypic effect of "use and disuse" is also typically favorable, previously cryptic genetic variation can be transformed into phenotypic variation that is both visible to selection and biased in an adaptive direction. Therefore, use-induced developmental plasticity in a very real sense "creates" new phenotypic variation that is nonrandom with respect to fitness, in contrast to the random phenotypic effects of mutation, recombination, and "direct effects" of environment (stress, nutrition). I offer here (a) a brief review of the immense literature on the effects of "use and disuse" on morphology, (b) a simple yet general model illustrating how cryptic genetic variation may be exposed to selection by developmentally plastic responses that alter trait performance in response to "use and disuse," and (c) a more detailed model of a positive feedback loop between learning (handed behavior) and morphological plasticity (use-induced morphological asymmetry) that may rapidly generate novel phenotypic variation and facilitate the evolution of conspicuous morphological asymmetries. Evidence from several sources suggests that handed behaviors played an important role both in the origin of novel forms (asymmetries) and in their subsequent evolution. Copyright © 2011 Wiley Periodicals, Inc., A Wiley Company.

  20. A REVIEW OF COLOR MEASURMENTS IN THE TEXTILE INDUSTRY

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    BRAD Raluca

    2016-05-01

    Full Text Available Color is an important factor in the evaluation of aesthetic appearance and functionality of many products, but especially of textile industry ones. In textiles production process, color can be assessed in different stages: the selection of raw materials, the incoming item tests, the preparation of dyeing ingredients, the crocking resistance testing, the color fastness and in all stages, the quality control. Color evaluation can be done visually or using specialized test instruments such as colorimeters or spectrometers, therefore a high accuracy of measurements must be achieved. Standards describe different procedures and testing techniques depending on the product type and the quality level required by the customer. The paper presents the most common systems of color representation and communication, measurement methods and techniques, and standards that define them. The CIE color representation systems have been reviewed, together with the measurement methods offering the repeatability of the process. Most of the standards have been issued in US, but several European and International are stating the color assessment process. We have also conducted a review of latest published papers in the topic of color measurement, comparison and match. Several image processing applications algorithms offers new opportunities for computer assisted evaluation and control of textile color properties.

  1. A color based face detection system using multiple templates

    Institute of Scientific and Technical Information of China (English)

    王涛; 卜佳俊; 陈纯

    2003-01-01

    A color based system using multiple templates was developed and implemented for detecting human faces in color images. The algorithm consists of three image processing steps. The first step is human skin color statistics. Then it separates skin regions from non-skin regions. After that, it locates the frontal human face(s) within the skin regions. In the first step, 250 skin samples from persons of different ethnicities are used to determine the color distribution of human skin in chromatic color space in order to get a chroma chart showing likelihoods of skin colors. This chroma chart is used to generate, from the original color image, a gray scale image whose gray value at a pixel shows its likelihood of representing the skin. The algorithm uses an adaptive thresholding process to achieve the optimal threshold value for dividing the gray scale image into separate skin regions from non skin regions. Finally, multiple face templates matching is used to determine if a given skin region represents a frontal human face or not. Test of the system with more than 400 color images showed that the resulting detection rate was 83%, which is better than most color-based face detection systems. The average speed for face detection is 0.8 second/image (400×300 pixels) on a Pentium 3 (800MHz) PC.

  2. Electron beam irradiation of gemstone for color enhancement

    Energy Technology Data Exchange (ETDEWEB)

    Idris, Sarada; Ghazali, Zulkafli; Hashim, Siti A' iasah; Ahmad, Shamshad; Jusoh, Mohd Suhaimi [Malaysian Nuclear Agency, Bangi, Selangor (Malaysia); School of Chemicals and Material Engineering, NUST Islamabad (Pakistan); Malaysian Nuclear Agency, Bangi, Selangor (Malaysia)

    2012-09-26

    Numerous treatment of gemstones has been going on for hundreds of years for enhancing color and clarity of gems devoid of these attributes. Whereas previous practices included fraudulent or otherwise processes to achieve the color enhancement, the ionizing radiation has proven to be a reliable and reproducible technique. Three types of irradiation processes include exposure to gamma radiation, electron beam irradiation and the nuclear power plants. Electron Beam Irradiation of Gemstone is a technique in which a gemstone is exposed to highly ionizing radiation electron beam to knock off electrons to generate color centers culminating in introduction of deeper colors. The color centers may be stable or unstable. Below 9MeV, normally no radioactivity is introduced in the exposed gems. A study was conducted at Electron Beam Irradiation Centre (Alurtron) for gemstone color enhancement by using different kind of precious gemstones obtained from Pakistan. The study shows that EB irradiation not only enhances the color but can also improves the clarity of some type of gemstones. The treated stones included kunzite, tourmaline, topaz, quartz, aquamarine and cultured pearls. Doses ranging from 25 kGy to 200 KGy were employed to assess the influence of doses on color and clarity and to select the optimum doses. The samples used included both the natural and the faceted gemstones. It is concluded that significant revenue generation is associated with the enhancement of the color in clarity of gemstones which are available at very cheap price in the world market.

  3. Electron beam irradiation of gemstone for color enhancement

    Science.gov (United States)

    Idris, Sarada; Ghazali, Zulkafli; Hashim, Siti A'iasah; Ahmad, Shamshad; Jusoh, Mohd Suhaimi

    2012-09-01

    Numerous treatment of gemstones has been going on for hundreds of years for enhancing color and clarity of gems devoid of these attributes. Whereas previous practices included fraudulent or otherwise processes to achieve the color enhancement, the ionizing radiation has proven to be a reliable and reproducible technique. Three types of irradiation processes include exposure to gamma radiation, electron beam irradiation and the nuclear power plants. Electron Beam Irradiation of Gemstone is a technique in which a gemstone is exposed to highly ionizing radiation electron beam to knock off electrons to generate color centers culminating in introduction of deeper colors. The color centers may be stable or unstable. Below 9MeV, normally no radioactivity is introduced in the exposed gems. A study was conducted at Electron Beam Irradiation Centre (Alurtron) for gemstone color enhancement by using different kind of precious gemstones obtained from Pakistan. The study shows that EB irradiation not only enhances the color but can also improves the clarity of some type of gemstones. The treated stones included kunzite, tourmaline, topaz, quartz, aquamarine and cultured pearls. Doses ranging from 25 kGy to 200 KGy were employed to assess the influence of doses on color and clarity and to select the optimum doses. The samples used included both the natural and the faceted gemstones. It is concluded that significant revenue generation is associated with the enhancement of the color in clarity of gemstones which are available at very cheap price in the world market.

  4. The King of the Dwarves: a new cryptic species of Dainty Frog (Anura: Pyxicephalidae: Cacosternum) from the eastern Great Escarpment of South Africa.

    Science.gov (United States)

    Conradie, Werner

    2014-04-04

    Phylogenetic reconstruction using the mitochondrial 16S marker shows the presence of a cryptic species of Cacosternum (Anura: Pyxicephalidae) from the eastern Great Escarpment of South Africa, supporting the Greater Maputaland-Pondoland-Albany region of vertebrate endemism. Bioacoustic and morphological characteristics, in conjunction with colouration differences, allow the description of this cryptic species. Tadpoles and details of life history are described.

  5. Integrative Taxonomic Approach for Describing a New Cryptic Species of Bush Frog (Raorchestes: Anura: Rhacophoridae from the Western Ghats, India.

    Directory of Open Access Journals (Sweden)

    H Priti

    Full Text Available A new cryptic species of bush frog Raorchestes honnametti sp. nov. is described from the south-eastern part of the Western Ghats, India. This newly described species belongs to the Charius clade and is morphologically similar to other clade members--R. charius and R. griet. Therefore, an integrative taxonomic approach based on molecular and bioacoustic analysis along with morphology was used to delimit the new species. Raorchestes honnametti sp. nov., is currently known only from Biligiri Rangaswamy Temple Tiger Reserve, a part of Biligiri Rangaswamy horst mountain range (a mountain formed due movement of two faults formed during the Late Quaternary period (1.8-2.58 Ma. Discovery of cryptic species from a highly speciose and well-studied genus Raorchestes hints at the possible existence of several more cryptic species in this genus. We discuss the possible reasons for crypsis and emphasize the need for continued systematic surveys of amphibians across the Western Ghats.

  6. Integrative Taxonomic Approach for Describing a New Cryptic Species of Bush Frog (Raorchestes: Anura: Rhacophoridae) from the Western Ghats, India.

    Science.gov (United States)

    Priti, H; Roshmi, Rekha Sarma; Ramya, Badrinath; Sudhira, H S; Ravikanth, G; Aravind, Neelavara Anantharam; Gururaja, Kotambylu Vasudeva

    2016-01-01

    A new cryptic species of bush frog Raorchestes honnametti sp. nov. is described from the south-eastern part of the Western Ghats, India. This newly described species belongs to the Charius clade and is morphologically similar to other clade members--R. charius and R. griet. Therefore, an integrative taxonomic approach based on molecular and bioacoustic analysis along with morphology was used to delimit the new species. Raorchestes honnametti sp. nov., is currently known only from Biligiri Rangaswamy Temple Tiger Reserve, a part of Biligiri Rangaswamy horst mountain range (a mountain formed due movement of two faults) formed during the Late Quaternary period (1.8-2.58 Ma). Discovery of cryptic species from a highly speciose and well-studied genus Raorchestes hints at the possible existence of several more cryptic species in this genus. We discuss the possible reasons for crypsis and emphasize the need for continued systematic surveys of amphibians across the Western Ghats.

  7. A cryptic sulfur cycle in oxygen-minimum-zone waters off the Chilean coast.

    Science.gov (United States)

    Canfield, Don E; Stewart, Frank J; Thamdrup, Bo; De Brabandere, Loreto; Dalsgaard, Tage; Delong, Edward F; Revsbech, Niels Peter; Ulloa, Osvaldo

    2010-12-03

    Nitrogen cycling is normally thought to dominate the biogeochemistry and microbial ecology of oxygen-minimum zones in marine environments. Through a combination of molecular techniques and process rate measurements, we showed that both sulfate reduction and sulfide oxidation contribute to energy flux and elemental cycling in oxygen-free waters off the coast of northern Chile. These processes may have been overlooked because in nature, the sulfide produced by sulfate reduction immediately oxidizes back to sulfate. This cryptic sulfur cycle is linked to anammox and other nitrogen cycling processes, suggesting that it may influence biogeochemical cycling in the global ocean.

  8. DNA barcoding reveals a cryptic nemertean invasion in Atlantic and Mediterranean waters

    Science.gov (United States)

    Fernández-Álvarez, Fernando Ángel; Machordom, Annie

    2013-09-01

    For several groups, like nemerteans, morphology-based identification is a hard discipline, but DNA barcoding may help non-experts in the identification process. In this study, DNA barcoding is used to reveal the cryptic invasion of Pacific Cephalothrix cf. simula into Atlantic and Mediterranean coasts. Although DNA barcoding is a promising method for the identification of Nemertea, only 6 % of the known number of nemertean species is currently associated with a correct DNA barcode. Therefore, additional morphological and molecular studies are necessary to advance the utility of DNA barcoding in the characterisation of possible nemertean alien invasions.

  9. DNA Barcoding Reveals Cryptic Diversity within Commercially Exploited Indo-Malay Carangidae (Teleosteii: Perciformes)

    Science.gov (United States)

    Mat Jaafar, Tun Nurul Aimi; Taylor, Martin I.; Mohd Nor, Siti Azizah; de Bruyn, Mark; Carvalho, Gary R.

    2012-01-01

    Background DNA barcodes, typically focusing on the cytochrome oxidase I gene (COI) in many animals, have been used widely as a species-identification tool. The ability of DNA barcoding to distinguish species from a range of taxa and to reveal cryptic species has been well documented. Despite the wealth of DNA barcode data for fish from many temperate regions, there are relatively few available from the Southeast Asian region. Here, we target the marine fish Family Carangidae, one of the most commercially-important families from the Indo-Malay Archipelago (IMA), to produce an initial reference DNA barcode library. Methodology/Principal Findings Here, a 652 bp region of COI was sequenced for 723 individuals from 36 putative species of Family Carangidae distributed within IMA waters. Within the newly-generated dataset, three described species exhibited conspecific divergences up to ten times greater (4.32–4.82%) than mean estimates (0.24–0.39%), indicating a discrepancy with assigned morphological taxonomic identification, and the existence of cryptic species. Variability of the mitochondrial DNA COI region was compared within and among species to evaluate the COI region's suitability for species identification. The trend in range of mean K2P distances observed was generally in accordance with expectations based on taxonomic hierarchy: 0% to 4.82% between individuals within species, 0% to 16.4% between species within genera, and 8.64% to 25.39% between genera within families. The average Kimura 2-parameter (K2P) distance between individuals, between species within genera, and between genera within family were 0.37%, 10.53% and 16.56%, respectively. All described species formed monophyletic clusters in the Neighbour-joining phylogenetic tree, although three species representing complexes of six potential cryptic species were detected in Indo-Malay Carangidae; Atule mate, Selar crumenophthalmus and Seriolina nigrofasciata. Conclusion/Significance This study confirms

  10. THE INFLUENCE OF WALL COLOR AND LAMP COLOR TEMPERATURE TO STUDENT’S CONCENTRATION AND COGNITION

    Directory of Open Access Journals (Sweden)

    KRISTANTO Luciana

    2016-07-01

    Full Text Available Concentration has an important role in our life, especially in order to get a quality and productivity in working. With concentration we can achieve the maximum and faster result in our work. Some ways to improve concentration that being researched here is by arranging the wall color and the lamp color temperature of the room. The color used as wall color in this research was the blue 9.8B, 7.4/5.6; and the orange 8.1YR, 8.7/3.7 of the Munsell color palette. Whereas the room lighting was the fluorescent lamp in 6500K (cool daylight and 2700K (warm white color temperature. Respondents of this research were 117 undergraduate students, the average GPA was 3.28; and 20,26 years as the mean age. The concentration and cognition tests are the Army Alfa test and IST subtest 9 that conducted in the room with different condition. Found in this research that the blue with cool daylight lamp has significant impact to concentration in 2,526 Lickert scale; and that orange with cool daylight lamp has correlation 0.781 to cognition result; but the other conditions have no significancy toward concentration and cognition

  11. Color consilience: color through the lens of art practice, history, philosophy, and neuroscience.

    Science.gov (United States)

    Conway, Bevil R

    2012-03-01

    Paintings can be interpreted as the product of the complex neural machinery that translates physical light signals into behavior, experience, and emotion. The brain mechanisms responsible for vision and perception have been sculpted during evolution and further modified by cultural exposure and development. By closely examining artists' paintings and practices, we can discover hints to how the brain works, and achieve insight into the discoveries and inventions of artists and their impact on culture. Here, I focus on an integral aspect of color, color contrast, which poses a challenge for artists: a mark situated on an otherwise blank canvas will appear a different color in the context of the finished painting. How do artists account for this change in color during the production of a painting? In the broader context of neural and philosophical considerations of color, I discuss the practices of three modern masters, Henri Matisse, Paul Cézanne, and Claude Monet, and suggest that the strategies they developed not only capitalized on the neural mechanisms of color, but also influenced the trajectory of western art history. © 2012 New York Academy of Sciences.

  12. WAVELET BASED CONTENT BASED IMAGE RETRIEVAL USING COLOR AND TEXTURE FEATURE EXTRACTION BY GRAY LEVEL COOCURENCE MATRIX AND COLOR COOCURENCE MATRIX

    Directory of Open Access Journals (Sweden)

    Jeyanthi Prabhu

    2014-01-01

    Full Text Available In this study we proposes an effective content based image retrieval by color and texture based on wavelet coefficient method to achieve good retrieval in efficiency. Color feature extraction is done by color Histogram. The texture feature extraction is acquired by Gray Level Coocurence Matrix (GLCM or Color Coocurence Matrix (CCM. This study provides better result for image retrieval by integrated features. Feature extraction by color Histogram, texture by GLCM, texture by CCM are compared in terms of precision performance measure.

  13. Locally identifying coloring of graphs

    CERN Document Server

    Esperet, Louis; Montassier, Mickael; Ochem, Pascal; Parreau, Aline

    2010-01-01

    A vertex-coloring of a graph G is said to be locally identifying if for any pair (u,v) of adjacent vertices of G, with distinct closed neighborhood, the set of colors that appears in the closed neighborhoods of u and v are distinct. In this paper, we give several bounds on the minimum number of colors needed in such a coloring for different families of graphs (planar graphs, some subclasses of perfect graphs, graphs with bounded maximum degree) and prove that deciding whether a subcubic bipartite graph with large girth has a locally identifying coloring with 3 colors is an NP-complete problem.

  14. Dinosaurs' True Colors

    Institute of Scientific and Technical Information of China (English)

    TANG YUANKAI

    2010-01-01

    @@ On March 10,the Beijing Museum of Natural History(BMNH)announced scientists from China and abroad had decoded the full-body color patterns of a dinosaur,a small theropod named as anchiomis huxleyi,for the first time.

  15. Color appearance in stereoscopy

    Science.gov (United States)

    Gadia, Davide; Rizzi, Alessandro; Bonanomi, Cristian; Marini, Daniele; Galmonte, Alessandra; Agostini, Tiziano

    2011-03-01

    The relationship between color and lightness appearance and the perception of depth has been studied since a while in the field of perceptual psychology and psycho-physiology. It has been found that depth perception affects the final object color and lightness appearance. In the stereoscopy research field, many studies have been proposed on human physiological effects, considering e.g. geometry, motion sickness, etc., but few has been done considering lightness and color information. Goal of this paper is to realize some preliminar experiments in Virtual Reality in order to determine the effects of depth perception on object color and lightness appearance. We have created a virtual test scene with a simple 3D simultaneous contrast configuration. We have created three different versions of this scene, each with different choices of relative positions and apparent size of the objects. We have collected the perceptual responses of several users after the observation of the test scene in the Virtual Theater of the University of Milan, a VR immersive installation characterized by a semi-cylindrical screen that covers 120° of horizontal field of view from an observation distance of 3.5 m. We present a description of the experiments setup and procedure, and we discuss the obtained results.

  16. "Color-Blind" Racism.

    Science.gov (United States)

    Carr, Leslie G.

    Examining race relations in the United States from a historical perspective, this book explains how the constitution is racist and how color blindness is actually a racist ideology. It is argued that Justice Harlan, in his dissenting opinion in Plessy v. Ferguson, meant that the constitution and the law must remain blind to the existence of race…

  17. Transparency and imaginary colors

    NARCIS (Netherlands)

    Richards, W.; Koenderink, J.J.; Van Doorn, A.

    2009-01-01

    Unlike the Metelli monochrome transparencies, when overlays and their backgrounds have chromatic content, the inferred surface colors may not always be physically realizable, and are in some sense “imaginary.” In these cases, the inferred chromatic transmittance or reflectance of the overlay lies ou

  18. Local Color Correction

    Directory of Open Access Journals (Sweden)

    Juan Gabriel Gomila Salas

    2011-09-01

    Full Text Available In this paper we present a local algorithm for contrast enhancement developed by N. Moroney at Hewlett-Packard Laboratories and presented at the IS&T/SID Eight Color Imaging Conference, in 2000. The algorithm uses a non-linear masking, is fast and does not require any manual parameter adjustments.

  19. "Color-Blind" Racism.

    Science.gov (United States)

    Carr, Leslie G.

    Examining race relations in the United States from a historical perspective, this book explains how the constitution is racist and how color blindness is actually a racist ideology. It is argued that Justice Harlan, in his dissenting opinion in Plessy v. Ferguson, meant that the constitution and the law must remain blind to the existence of race…

  20. Color discrimination data

    NARCIS (Netherlands)

    Bouman, M.A.; Walraven, P.L.

    1972-01-01

    The sense of sight provides us with information on how the radiance of the environment is distributed in time and space. Such information pertains to both the energy and the spectral distribution of the radiance. Researchers in the field of color vision generally assume that, as attributes of visual

  1. Colorful Kindergarten Mice

    Science.gov (United States)

    Bobick, Bryna; Wheeler, Elizabeth

    2008-01-01

    Developing kindergarten lessons can be very challenging, especially at the beginning of the school year when many students are just learning to cut paper and hold crayons. The author's favorite beginning unit of the year is "mice paintings," a practical introduction to drawing, color theory, and painting. This unit also incorporates children's…

  2. Color Wheel Windows

    Science.gov (United States)

    Leonard, Stephanie

    2012-01-01

    In this article, the author describes a painting and drawing lesson which was inspired by the beautiful circular windows found in cathedrals and churches (also known as "rose windows"). This two-week lesson would reinforce both the concept of symmetry and students' understanding of the color wheel. (Contains 1 online resource.)

  3. Analysis of color profile quality of digital projector

    Directory of Open Access Journals (Sweden)

    Iva Molek

    2016-03-01

    Full Text Available The aim of the present study was to analyze the display of colors in digital projection. For this purpose the digital projector NEC NP210 was used. The measurements were performed in accordance with the instructions and recommendations of ISO standards. Our goal was to research the creation of color profile of the projector using a EyeOne Pro spectrophotometer and to establish whether the size of color gamut of standardized sRGB color space can be reached by characterization of the digital projector modules. By using the color chart Color Checker Classic, the photometric and colorimetric accuracy of the characterized and uncharacterized projection were evaluated. In the final part of the research, comparison between the colorimetric accuracy of the computer screen and the digital projector was performed. The results showed that by module characterization of the NEC NP210 Movie projector in studio conditions, the same size of the color space could not be achieved as by using the default sRGB module. Evaluation of colorimetric accuracy by using the digitalized color chart Color Checker Classic provides usable results, especially when the display of chromatic colors with emphasis on skin tones, and achromatic colors with emphasis on grey balance or chromaticity respectively, were examined. Based on the obtained results of the computer screen and digital projector comparison, it could be concluded that both compared computer screens match the standards. Overall, the NEC NP210 projector with the sRGB default module without profile could be also used if necessary. Thus, we can sum up that digital projection displaying standardized sRGB color space could not be comparable to a high quality CRT or LCD computer screen.

  4. Social Property of Colors and Translation of Color Words

    Institute of Scientific and Technical Information of China (English)

    曾慧彬

    2013-01-01

    The paper is about the social property of colors andtranslationofcolorwords.Colorsareveryimportantinour sociallife,accordingtothispaperwecanknowsomerelations aboutsocialandcolor.EspeciallyaboutthedifferencesofChinese and English color words. Through the differences, three basic translatingmethodsaregeneralized.

  5. Using Single Colors and Color Pairs to Communicate Basic Tastes

    Directory of Open Access Journals (Sweden)

    Andy T. Woods

    2016-07-01

    Full Text Available Recently, it has been demonstrated that people associate each of the basic tastes (e.g., sweet, sour, bitter, and salty with specific colors (e.g., red, green, black, and white. In the present study, we investigated whether pairs of colors (both associated with a particular taste or taste word would give rise to stronger associations relative to pairs of colors that were associated with different tastes. We replicate the findings of previous studies highlighting the existence of a robust crossmodal correspondence between individual colors and basic tastes. However, while there was evidence that pairs of colors could indeed communicate taste information more consistently than single colors, our participants took more than twice as long to match the color pairs with tastes than the single colors. Possible reasons for these results are discussed.

  6. The Female Bonding in The Color Purple

    Institute of Scientific and Technical Information of China (English)

    余跃

    2007-01-01

    This paper aims at a survey of the female bonding in The Color Purple,which plays an important role in the heroine's finding her voice and sense of self.By examining the black women's struggle to explore their identity and claim their selves under sexual and racial oppressions,Alice Walker,the author,shows her understanding of the process that black women must undergo to achieve their vision.

  7. Spectral optimization based simultaneously on color-rendering index and color quality scale for white LED illumination

    Science.gov (United States)

    Zhang, J. J.; Hu, R.; Yu, X. J.; Xie, B.; Luo, X. B.

    2017-02-01

    Color performance is an important parameter for high-quality light-emitting diode (LED) lighting. Color-rendering index (CRI) and color quality scale (CQS) are two independent parameters to assess the color performance, but high CRI does not correspond to high CQS, and vice versa. Therefore, it's urgent to find a comprehensive and effective metric for assessing the color performance of LEDs that can simultaneously exhibit high color-rendering index (CRI) and high color quality scale (CQS) values. In this study, a genetic algorithm with a penalty function was proposed for realizing spectral optimization by boosting the maximum attainable luminous efficacy of radiation (LER) of spectra while constraining both high CRI and CQS. By simulations, white spectra from LEDs with CRI≥95 and CQS≥95 were achieved at different correlated color temperatures (CCTs) from 2020 K to 7929 K. Further, a real spectra-tunable LED module consisting of four LEDs is fabricated, and high LER (344 lm/W) and color performance (CRI≥90, CQS=90) was realized by tuning driving currents.

  8. Theoretical design of multi-colored semi-transparent organic solar cells with both efficient color filtering and light harvesting.

    Science.gov (United States)

    Wen, Long; Chen, Qin; Sun, Fuhe; Song, Shichao; Jin, Lin; Yu, Yan

    2014-11-13

    Solar cells incorporated with multi-coloring capability not only offer an aesthetic solution to bridge the gap between solar modules and building decorations but also open up the possibility for self-powered colorful display. In this paper, we proposed a multi-colored semi-transparent organic solar cells (TOSCs) design containing metallic nanostructures with the both high color purity and efficiency based on theoretical considerations. By employing guided mode resonance effect, the multi-colored TOSC behave like an efficient color filter that selectively transmits light with the desired wavelengths and generates electricity with light of other wavelengths. Broad range of coloring and luminosity adjusting for the transmission light can be achieved by simply tuning the period and the duty cycle of the metallic nanostructures. Furthermore, accompanying with the efficient color filtering characteristics, the optical absorption of TOSCs was improved due to the marked suppression of transmission loss at the off-resonance wavelengths and the increased light trapping in TOSCs. The mechanisms of the light guiding in photoactive layer and broadband backward scattering from the metallic nanostructures were identified to make an essential contribution to the improved light-harvesting. By enabling efficient color control and high efficiency simultaneously, this approach holds great promise for future versatile photovoltaic energy utilization.

  9. Activating the expression of bacterial cryptic genes by rpoB mutations in RNA polymerase or by rare earth elements.

    Science.gov (United States)

    Ochi, Kozo; Tanaka, Yukinori; Tojo, Shigeo

    2014-02-01

    Since bacteria were found to contain genes encoding enzymes that synthesize a plethora of potential secondary metabolites, interest has grown in the activation of these cryptic pathways. Homologous and heterologous expression of these cryptic secondary metabolite-biosynthetic genes, often "silent" under ordinary laboratory fermentation conditions, may lead to the discovery of novel secondary metabolites. We review current progress on this topic, describing concepts for activating silent genes. We especially focus on genetic manipulation of transcription and translation, as well as the utilization of rare earth elements as a novel method to activate the silent genes. The possible roles of silent genes in bacterial physiology are also discussed.

  10. How bees distinguish colors

    Directory of Open Access Journals (Sweden)

    Horridge A

    2015-03-01

    Full Text Available Adrian Horridge Biological Sciences, Australian National University, Canberra, ACT, Australia Abstract: Behind each facet of the compound eye, bees have photoreceptors for ultraviolet, green, and blue wavelengths that are excited by sunlight reflected from the surrounding panorama. In experiments that excluded ultraviolet, bees learned to distinguish between black, gray, white, and various colors. To distinguish two targets of differing color, bees detected, learned, and later recognized the strongest preferred inputs, irrespective of which target displayed them. First preference was the position and measure of blue reflected from white or colored areas. They also learned the positions and a measure of the green receptor modulation at vertical edges that displayed the strongest green contrast. Modulation is the receptor response to contrast and was summed over the length of a contrasting vertical edge. This also gave them a measure of angular width between outer vertical edges. Third preference was position and a measure of blue modulation. When they returned for more reward, bees recognized the familiar coincidence of these inputs at that place. They cared nothing for colors, layout of patterns, or direction of contrast, even at black/white edges. The mechanism is a new kind of color vision in which a large-field tonic blue input must coincide in time with small-field phasic modulations caused by scanning vertical edges displaying green or blue contrast. This is the kind of system to expect in medium-lowly vision, as found in insects; the next steps are fresh looks at old observations and quantitative models. Keywords: vision, honey bee, visual processing, optimum system, picture sorting

  11. Human preference for individual colors

    Science.gov (United States)

    Palmer, Stephen E.; Schloss, Karen B.

    2010-02-01

    Color preference is an important aspect of human behavior, but little is known about why people like some colors more than others. Recent results from the Berkeley Color Project (BCP) provide detailed measurements of preferences among 32 chromatic colors as well as other relevant aspects of color perception. We describe the fit of several color preference models, including ones based on cone outputs, color-emotion associations, and Palmer and Schloss's ecological valence theory. The ecological valence theory postulates that color serves an adaptive "steering' function, analogous to taste preferences, biasing organisms to approach advantageous objects and avoid disadvantageous ones. It predicts that people will tend to like colors to the extent that they like the objects that are characteristically that color, averaged over all such objects. The ecological valence theory predicts 80% of the variance in average color preference ratings from the Weighted Affective Valence Estimates (WAVEs) of correspondingly colored objects, much more variance than any of the other models. We also describe how hue preferences for single colors differ as a function of gender, expertise, culture, social institutions, and perceptual experience.

  12. Natural-color maps via coloring of bivariate grid data

    Science.gov (United States)

    Darbyshire, Jane E.; Jenny, Bernhard

    2017-09-01

    Natural ground color is useful for maps where a representation of the Earth's surface matters. Natural color schemes are less likely to be misinterpreted, as opposed to hypsometric color schemes, and are generally preferred by map readers. The creation of natural-color maps was once limited to manual cartographic techniques, but they can now be created digitally with the aid of raster graphics editing software. However, the creation of natural-color maps still requires many steps, a significant time investment, and fairly detailed digital land cover information, which makes this technique impossible to apply to global web maps at medium and large scales. A particular challenge for natural-color map creation is adjusting colors with location to create smoothly blending transitions. Adjustments with location are required to show land cover transitions between climate zones with a natural appearance. This study takes the first step in automating the process in order to facilitate the creation of medium- and large-scale natural-color maps covering large areas. A coloring method based on two grid inputs is presented. Here, we introduce an algorithmic method and prototype software for creating maps with this technique. The prototype software allows the map author to interactively assign colors to design the appearance of the map. This software can generate web map tiles at a global level for medium and large scales. Example natural-color web maps created with this coloring technique are provided.

  13. An innovative color LCD using three color bank scrolling backlights

    Science.gov (United States)

    Wang, Jia-Chang; Lin, Jui-Lung

    2009-02-01

    In order to improve the approach of the conventional LCD colored image display that has been using color filter, this research is to lead a unique innovative design by using three colors bank scrolling backlight. The backlight scrolling uses Light-Emitting-Diodes (LEDs) to replace the conventional cold cathode fluorescent lamp for fleetly light alternating between Red, Green, and Blue. Images with bank segments can be displayed in terms of RGB colors in time series. According to the human persistence of vision effect, a colorful image can be demonstrated. The advantages of this three color bank scrolling can provide a cost saving because there is no color-filter of the display, resolution tripling with RGB on the same pixel, and abundant in color saturation for the selection of dedicating wavelength LEDs color mixture. Practically, this research contents the experiments of three color bank scrolling, a building up of the prototype for backlight system, optics adjustment for a proper color mixture. The results of this research show the system not only could displace the color filter but also triple the resolution. Consequently, the system is practicable and can be proposed as a new innovation to LCD industry.

  14. A color management system for multi-colored LED lighting

    DEFF Research Database (Denmark)

    Chakrabarti, Maumita; Thorseth, Anders; Jepsen, Jørgen;

    2015-01-01

    A new color control system is described and implemented for a five–color LED light engine, covering a wide white gamut. The system combines a new way of using pre-calibrated look-up tables and a rule-based optimization of chromaticity distance from the Planckian locus with a calibrated color sens...

  15. Interior space design colors and effects on psychological

    Institute of Scientific and Technical Information of China (English)

    迟亦然

    2015-01-01

    The problem of relationship between human and environment is becoming more and more get the attention of people today. Similarly, from the relation between human and environment to a high degree of understanding of environmental development and creation, but also in recent years environmental art a great progress in understanding the. Indoor color in addition to the visual impact of the environment, but also directly affect people’s emotions, psychology. The scientific use of color is conducive to work, is helpful to health, color can properly deal with the functional requirements of the United States can achieve results. Indoor color in addition to color rules must comply with the general, but also changes with the times and different aesthetic view.

  16. Full-Spectrum Flexible Color Printing at the Diffraction Limit

    CERN Document Server

    Richner, Patrizia; Lendenmann, Tobias; Kress, Stephan J P; Kim, David K; Norris, David J; Poulikakos, Dimos

    2016-01-01

    Color printing at the diffraction limit has been recently explored by fabricating nanoscale plasmonic structures with electron beam lithography. However, only a limited color range and constant intensity throughout the structure have been demonstrated. Here we show an alternative, facile approach relying on the direct, open-atmosphere electrohydrodynamic rapid nanodrip printing of controlled amounts of red, green and blue (RGB) quantum dots at a resolution of 250 nm. The narrow emission spectrum of the dots allows the coverage of a very broad color space, exceeding standard RGB (sRGB) of modern display devices. We print color gradients of variable intensity, which to date could not be achieved with diffraction-limited resolution. Showcasing the capabilities of the technology, we present a photo-realistic printed image of a colorful parrot with a pixel size of 250 nm.

  17. Personalized 2D color maps

    KAUST Repository

    Waldin, Nicholas

    2016-06-24

    2D color maps are often used to visually encode complex data characteristics such as heat or height. The comprehension of color maps in visualization is affected by the display (e.g., a monitor) and the perceptual abilities of the viewer. In this paper we present a novel method to measure a user\\'s ability to distinguish colors of a two-dimensional color map on a given monitor. We show how to adapt the color map to the user and display to optimally compensate for the measured deficiencies. Furthermore, we improve user acceptance of the calibration procedure by transforming the calibration into a game. The user has to sort colors along a line in a 3D color space in a competitive fashion. The errors the user makes in sorting these lines are used to adapt the color map to his perceptual capabilities.

  18. Color and appearance metrology facility

    Data.gov (United States)

    Federal Laboratory Consortium — The NIST Physical Measurement Laboratory has established the color and appearance metrology facility to support calibration services for 0°/45° colored samples, 20°,...

  19. Testing Children for Color Blindness

    Science.gov (United States)

    ... Stories Español Eye Health / News Testing Children for Color Blindness Written By: Shirley Dang Apr. 03, 2014 New study shows that kids can be tested for color blindness as soon as age 4, finds Caucasian boys ...

  20. Color Changes Mark Polymer Reactions.

    Science.gov (United States)

    Krieger, James H.

    1980-01-01

    Describes how polydiacetylenes can be used as educational aids. These polymers have conjugated backbones, which cause changes in color when the polydiacetylenes undergo various chemical and physical processes. Diagrams summarize all chemical reactions and their associated color changes. (CS)

  1. Advantage of dichromats over trichromats in discrimination of color-camouflaged stimuli in nonhuman primates.

    Science.gov (United States)

    Saito, Atsuko; Mikami, Akichika; Kawamura, Shoji; Ueno, Yoshikazu; Hiramatsu, Chihiro; Widayati, Kanthi A; Suryobroto, Bambang; Teramoto, Migaku; Mori, Yusuke; Nagano, Kunitoshi; Fujita, Kazuo; Kuroshima, Hika; Hasegawa, Toshikazu

    2005-12-01

    Due to a middle- to long-wavelength-sensitive (M/LWS) cone opsin polymorphism, there is considerable phenotypic variation in the color vision of New World monkeys. Many females have trichromatic vision, whereas some females and all males have dichromatic vision. The selective pressures that maintain this polymorphism are unclear. In the present study we compared the performance of dichromats and trichromats in a discrimination task. We examined tri- and dichromatic individuals of two species: brown capuchin monkeys (Cebus apella) and long-tailed macaques (Macaca fascicularis). We also examined one protanomalous chimpanzee (Pan troglodytes). The subjects' task was to discriminate a circular pattern from other patterns in which textural elements differed in orientation and thickness from the background. After they were trained with stimuli of a single color, the subjects were presented with color-camouflaged stimuli with a green/red mosaic overlaid onto the pattern. The dichromatic monkeys and the protanomalous chimpanzee selected the correct stimulus under camouflaged conditions at rates significantly above chance levels, while the trichromats did not. These findings demonstrate that dichromatic nonhuman primates possess a superior visual ability to discriminate color-camouflaged stimuli, and that such an ability may confer selective advantages with respect to the detection of cryptic foods and/or predators.

  2. Morphology and molecules reveal unexpected cryptic diversity in the enigmatic genus Sinobirma Bryk, 1944 (Lepidoptera: Saturniidae.

    Directory of Open Access Journals (Sweden)

    Rodolphe Rougerie

    Full Text Available The wild silkmoth genus Sinobirma Bryk, 1944 is a poorly known monotypic taxon from the eastern end of the Himalaya Range. It was convincingly proposed to be closely related to some members of an exclusively Afro-tropical group of Saturniidae, but its biogeographical and evolutionary history remains enigmatic. After examining recently collected material from Tibet, northern India, and northeastern Myanmar, we realized that this unique species, S. malaisei Bryk, 1944 only known so far from a few specimens and from a very restricted area near the border between north-eastern Myanmar and the Yunnan province of China, may in fact belong to a group of closely related cryptic species. In this work, we combined morphological comparative study, DNA barcoding, and the sequences of a nuclear marker (D2 expansion segment of the 28S rRNA gene to unequivocally delimit three distinct species in the genus Sinobirma, of which two are described as new to science: S. myanmarensis sp. n. and S. bouyeri sp. n. An informative DNA barcode sequence was obtained from the female holotype of S. malaisei--collected in 1934--ensuring the proper assignation of this name to the newly collected and studied specimens. Our findings represent another example of the potential of coupling traditional taxonomy and DNA barcoding for revealing and solving difficult cases of cryptic diversity. This approach is now being generalized to the world fauna of Saturniidae, with the participation of most of the taxonomists studying these moths.

  3. A bridge too far: dispersal barriers and cryptic speciation in an Arabian Peninsula grouper (Cephalopholis hemistiktos)

    KAUST Repository

    Priest, Mark

    2015-12-12

    Aim: We use genetic and age-based analyses to assess the evidence for a biogeographical barrier to larval dispersal in the yellowfin hind, Cephalopholis hemistiktos, a commercially important species found across the Arabian Peninsula. Location: Red Sea, Gulf of Aden, Gulf of Oman and Arabian Gulf. Methods: Mitochondrial DNA cytochrome-c oxidase subunit-I and nuclear DNA (S7) sequences were obtained for C. hemistiktos sampled throughout its distributional range. Phylogeographical and population-level analyses were used to assess patterns of genetic structure and to identify barriers to dispersal. Concurrently, age-based demographic analyses using otoliths determined differences in growth and longevity between regions. Results: Our analyses revealed significant genetic structure congruent with growth parameter differences observed across sampling sites, suggesting cryptic speciation between populations in the Red Sea and Gulf of Aden versus the Gulf of Oman and Arabian Gulf. Coalescence analyses indicated these two regions have been isolated for > 800,000 years. Main conclusions: Our results indicate historical disruption to gene flow and a contemporary dispersal barrier in the Arabian Sea, which C. hemistiktos larvae are unable to effectively traverse. This provides yet another example of a (cryptic) species with high dispersive potential whose range is delimited by a lack of suitable habitat between locations or an inability to successfully recruit at the range edge. © 2015 John Wiley & Sons Ltd.

  4. Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development.

    Science.gov (United States)

    Pires, Nuno D; Bemer, Marian; Müller, Lena M; Baroux, Célia; Spillane, Charles; Grossniklaus, Ueli

    2016-01-01

    Embryonic development requires a correct balancing of maternal and paternal genetic information. This balance is mediated by genomic imprinting, an epigenetic mechanism that leads to parent-of-origin-dependent gene expression. The parental conflict (or kinship) theory proposes that imprinting can evolve due to a conflict between maternal and paternal alleles over resource allocation during seed development. One assumption of this theory is that paternal alleles can regulate seed growth; however, paternal effects on seed size are often very low or non-existent. We demonstrate that there is a pool of cryptic genetic variation in the paternal control of Arabidopsis thaliana seed development. Such cryptic variation can be exposed in seeds that maternally inherit a medea mutation, suggesting that MEA acts as a maternal buffer of paternal effects. Genetic mapping using recombinant inbred lines, and a novel method for the mapping of parent-of-origin effects using whole-genome sequencing of segregant bulks, indicate that there are at least six loci with small, paternal effects on seed development. Together, our analyses reveal the existence of a pool of hidden genetic variation on the paternal control of seed development that is likely shaped by parental conflict.

  5. Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development.

    Directory of Open Access Journals (Sweden)

    Nuno D Pires

    2016-01-01

    Full Text Available Embryonic development requires a correct balancing of maternal and paternal genetic information. This balance is mediated by genomic imprinting, an epigenetic mechanism that leads to parent-of-origin-dependent gene expression. The parental conflict (or kinship theory proposes that imprinting can evolve due to a conflict between maternal and paternal alleles over resource allocation during seed development. One assumption of this theory is that paternal alleles can regulate seed growth; however, paternal effects on seed size are often very low or non-existent. We demonstrate that there is a pool of cryptic genetic variation in the paternal control of Arabidopsis thaliana seed development. Such cryptic variation can be exposed in seeds that maternally inherit a medea mutation, suggesting that MEA acts as a maternal buffer of paternal effects. Genetic mapping using recombinant inbred lines, and a novel method for the mapping of parent-of-origin effects using whole-genome sequencing of segregant bulks, indicate that there are at least six loci with small, paternal effects on seed development. Together, our analyses reveal the existence of a pool of hidden genetic variation on the paternal control of seed development that is likely shaped by parental conflict.

  6. How plasticity, genetic assimilation and cryptic genetic variation may contribute to adaptive radiations.

    Science.gov (United States)

    Schneider, Ralf F; Meyer, Axel

    2017-01-01

    There is increasing evidence that phenotypic plasticity can promote population divergence by facilitating phenotypic diversification and, eventually, genetic divergence. When a 'plastic' population colonizes a new habitat, it has the possibility to occupy multiple niches by expressing several distinct phenotypes. These initially reflect the population's plastic range but may later become genetically fixed by selection via the process of 'genetic assimilation' (GA). Through this process multiple specialized sister lineages can arise that share a common plastic ancestor - the 'flexible stem'. Here, we review possible molecular mechanisms through which natural selection could fix an initially plastic trait during GA. These mechanisms could also explain how GA may contribute to cryptic genetic variation that can subsequently be coopted into other phenotypes or traits, but also lead to nonadaptive responses. We outline the predicted patterns of genetic and transcriptional divergence accompanying flexible stem radiations. The analysis of such patterns of (retained) adaptive and nonadaptive plastic responses within and across radiating lineages can inform on the state of ongoing GA. We conclude that, depending on the stability of the environment, the molecular architecture underlying plastic traits can facilitate diversification, followed by fixation and consolidation of an adaptive phenotype and degeneration of nonadaptive ones. Additionally, the process of GA may increase the cryptic genetic variation of populations, which on one hand may serve as substrate for evolution, but on another may be responsible for nonadaptive responses that consolidate local allopatry and thus reproductive isolation.

  7. Characterization of a cryptic plasmid from an alpha-proteobacterial endosymbiont of Amoeba proteus.

    Science.gov (United States)

    Park, Miey; Kim, Min-Soo; Lee, Kyung-Min; Hwang, Sue-Yun; Ahn, Tae In

    2009-01-01

    A new cryptic plasmid pAP3.9 was discovered in symbiotic alpha-proteobacteria present in the cytoplasm of Amoeba proteus. The plasmid is 3869bp with a GC content of 34.66% and contains replication origins for both double-strand (dso) and single-strand (sso). It has three putative ORFs encoding Mob, Rep and phosphoglycolate phosphatase (PGPase). The pAP3.9 plasmid appears to propagate by the conjugative rolling-circle replication (RCR), since it contains all required factors such as Rep, sso and dso. Mob and Rep showed highest similarities to those of the cryptic plasmid pBMYdx in Bacillus mycoides. The PGPase was homologous to that of Bacillus cereus and formed a clade with those of Bacillus sp. in molecular phylogeny. These results imply that the pAP3.9 plasmid evolved by the passage through Bacillus species. We hypothesize that the plasmid-encoded PGPase may have contributed to the establishment of bacterial symbiosis within the hostile environment of amoeba cytoplasm.

  8. Spermicide, cryptic female choice and the evolution of sperm form and function.

    Science.gov (United States)

    Holman, L; Snook, R R

    2006-09-01

    Sperm competition and cryptic female choice profoundly affect sperm morphology, producing diversity within both species and individuals. One type of within-individual sperm variation is sperm heteromorphism, in which each male produces two or more distinct types of sperm simultaneously, only one of which is typically fertile (the "eusperm"). The adaptive significance of nonfertile "parasperm" types is poorly understood, although numerous sperm-heteromorphic species are known from many disparate taxa. This paper examines in detail two female-centred hypotheses for the evolution and maintenance of this unconventional sperm production strategy. First, we use game theoretical models to establish that parasperm may function to protect eusperm from female-generated spermicide, and to elucidate the predictions of this idea. Second, we expand on the relatively undeveloped idea that parasperm are used by females as a criterion for cryptic female choice, and discuss the predictions generated by this idea compared to other hypotheses proposed to explain sperm heteromorphism. We critically evaluate both hypotheses, suggest ways in which they could be tested, and propose taxa in which they could be important.

  9. Copulatory courtship and cryptic female choice in red flour beetles Tribolium castaneum.

    Science.gov (United States)

    Edvardsson, M; Arnqvist, G

    2000-03-22

    Males of many animal species engage in courtship behaviours during and after copulation that appear to be solely aimed at stimulating the female. It has been suggested that these behaviours have evolved by cryptic female choice, whereby females are thought to impose biases on male postmating paternity success. Males of the red flour beetle Tribolium castaneum rub the lateral edges of the females' elytra with their tarsi during copulation. We manipulated female perception of this behaviour by tarsal ablation in males, thus preventing males from reaching the edge of the female elytra with their manipulated legs, and by subsequently performing a series of double-mating experiments where the copulatory behaviour was quantified. We found a positive relationship between the intensity of the copulatory courtship behaviour and relative fertilization success among unmanipulated males. This pattern, however, was absent in manipulated males, where female perception of male behaviour differed from that actually performed. Thus, female perception of male copulatory courtship behaviour, rather than male behaviour per se, apparently governs the fate of sperm competing over fertilizations within the female, showing that copulatory courtship is under selection by cryptic female choice.

  10. Cryptic female choice: frogs reduce clutch size when amplexed by undesired males.

    Science.gov (United States)

    Reyer, H U; Frei, G; Som, C

    1999-10-22

    In species with internal fertilization, females can 'cryptically' choose (e.g. through sperm selection) which individuals sire their offspring, even when their overt preferences for copulatory partners are overrun by male-male competition and sexual coercion. The experiment presented here reveals that control of paternity after copulation has begun is also possible in species with external fertilization. Females of the hybridogenetic Rana essonae-Rana esculenta (LL-LR) waterfrog complex adjust their clutch size in response to mate type: they release fewer eggs when amplexed by hybrid LR males who--jeopardize successful reproduction--than when amplexed by parental LL males. This reduction in the number of eggs laid can increase a female's residual reproductive value through a second mating in the same breeding season or a larger clutch size in the next year. We argue that cryptic female choice through clutch size adjustment (i) may have evolved more often than previously assumed, and (ii) can arise even where females mate only once during a reproductive period.

  11. Copulation duration and fertilization success in a damselfly: an example of cryptic female choice?

    Science.gov (United States)

    Andrés; Cordero Rivera A

    2000-04-01

    Copulation duration is highly variable (0.5-3 h) in the damselfly, Ceriagrion tenellum (Coenagrionidae). Using laboratory experiments, we tested four adaptive hypotheses to explain this variation: the effect of time constraints, in-copula mate guarding, sperm displacement and cryptic female choice. Copulation duration was negatively correlated with time of day, as predicted by the first two hypotheses, and positively correlated with male density, as predicted by the mate-guarding hypothesis. Males prolonged copulation in response to the volume of sperm stored by females, suggesting they were able to detect and quantify the amount of sperm stored. This behaviour is not explained by mate guarding or time constraint effects. Males removed all the sperm from the bursa copulatrix in just 10 min. Our results also suggest that, because the duct is too narrow to allow male genitalia to enter, males do not remove spermathecal sperm. Therefore, direct sperm removal could not explain long copulations. Prolonged copulations could also have evolved as a result of cryptic female choice if they increase male fertilization success by female-mediated processes. Our results support this idea: male fertilization success was greater after long copulations. Apparently, male copulatory behaviour elicits female responses that increase male fertilization success. Copyright 2000 The Association for the Study of Animal Behaviour.

  12. Cryptic species of cardinalfish with evidence for old and new divergence

    Science.gov (United States)

    Gerlach, Gabriele; Atema, Jelle; Raupach, Michael J.; Deister, Fabian; Müller, Anke; Kingsford, Michael J.

    2016-06-01

    Larval dispersal and limited knowledge of physical boundaries challenge our understanding of the processes that drive genetic divergence and potential speciation in the marine environment. Divergence, both within and between populations of marine taxa, is not uncommon, but spatial and temporal stability of observed genetic structure is not well known. Previously, we detected large genetic differences among populations of the cardinalfish species Ostorhinchus doederleini inhabiting adjacent coral reefs. Here, we determined the spatial and temporal persistence of these genetic structures over the course of ten consecutive generations. Using microsatellite markers, we detected large changes (genetic population distance, D est, ranged from 0.04 to 0.46) in the genetic structure in some years, but some reefs maintained the same populations for nearly all sampling years. As this species' life span does not exceed 1 yr, persistence of distinct reef populations suggests natal homing. Mitochondrial identity based on two mtDNA markers corroborates the nuclear genetic evidence for genetic differences large enough to constitute different clades and even cryptic species in O. doederleini, which, based on gross morphology, was thought to be a single taxon. Habitat specialization was observed in one clade that exclusively inhabited reef lagoons, while all clades could be observed on reef slopes. We suggest that local habitat recognition combined with local population recognition and selection against hybrids can form barriers that maintain a cryptic species complex.

  13. Comparison of morphological and genetic analyses reveals cryptic divergence and morphological plasticity in Stylophora (Cnidaria, Scleractinia)

    Science.gov (United States)

    Stefani, Fabrizio; Benzoni, F.; Yang, S.-Y.; Pichon, M.; Galli, P.; Chen, C. A.

    2011-12-01

    A combined morphological and genetic study of the coral genus Stylophora investigated species boundaries in the Gulf of Aden, Yemen. Two mitochondrial regions, including the hypervariable IGS9 spacer and the control region, and a fragment of rDNA were used for phylogenetic analysis. Results were compared by multivariate analysis on the basis of branch morphology and corallite morphometry. Two species were clearly discriminated by both approaches. The first species was characterised by small corallites and a low morphological variability and was ascribed to a new geographical record of Stylophora madagascarensis on the basis of its phylogenetic distinction and its morphological similarity to the type material. The second species was characterised by larger corallite size and greater morphological variability and was ascribed to Stylophora pistillata. The analysis was extended to the intrageneric level for other S. pistillata populations from the Red Sea and the Pacific Ocean. Strong internal divergence was evident in the genus Sty lophora. S. pistillata populations were split into two highly divergent Red Sea/Gulf of Aden and western Pacific lineages with significant morphological overlap, which suggests they represent two distinct cryptic species. The combined use of morphological and molecular approaches, so far proved to be a powerful tool for the re-delineation of species boundaries in corals, provided novel evidence of cryptic divergence in this group of marine metazoans.

  14. A human PrM antibody that recognizes a novel cryptic epitope on dengue E glycoprotein.

    Science.gov (United States)

    Chan, Annie Hoi Yi; Tan, Hwee Cheng; Chow, Angelia Yee; Lim, Angeline Pei Chiew; Lok, Shee Mei; Moreland, Nicole J; Vasudevan, Subhash G; MacAry, Paul A; Ooi, Eng Eong; Hanson, Brendon J

    2012-01-01

    Dengue virus (DENV) is a major mosquito-borne pathogen infecting up to 100 million people each year; so far no effective treatment or vaccines are available. Recently, highly cross-reactive and infection-enhancing pre-membrane (prM)-specific antibodies were found to dominate the anti-DENV immune response in humans, raising concern over vaccine candidates that contain native dengue prM sequences. In this study, we have isolated a broadly cross-reactive prM-specific antibody, D29, during a screen with a non-immunized human Fab-phage library against the four serotypes of DENV. The antibody is capable of restoring the infectivity of virtually non-infectious immature DENV (imDENV) in FcγR-bearing K562 cells. Remarkably, D29 also cross-reacted with a cryptic epitope on the envelope (E) protein located to the DI/DII junction as evidenced by site-directed mutagenesis. This cryptic epitope, while inaccessible to antibody binding in a native virus particle, may become exposed if E is not properly folded. These findings suggest that generation of anti-prM antibodies that enhance DENV infection may not be completely avoided even with immunization strategies employing E protein alone or subunits of E proteins.

  15. Integrative taxonomy detects cryptic and overlooked fish species in a neotropical river basin.

    Science.gov (United States)

    Gomes, Laís Carvalho; Pessali, Tiago Casarim; Sales, Naiara Guimarães; Pompeu, Paulo Santos; Carvalho, Daniel Cardoso

    2015-10-01

    The great freshwater fish diversity found in the neotropical region makes management and conservation actions challenging. Due to shortage of taxonomists and insufficient infrastructure to deal with such great biodiversity (i.e. taxonomic impediment), proposed remedies to accelerate species identification and descriptions include techniques that combine DNA-based identification and concise morphological description. The building of a DNA barcode reference database correlating meristic and genetic data was developed for 75 % of the Mucuri River basin's freshwater fish. We obtained a total of 141 DNA barcode sequences from 37 species belonging to 30 genera, 19 families, and 5 orders. Genetic distances within species, genera, and families were 0.74, 9.5, and 18.86 %, respectively. All species could be clearly identified by the DNA barcodes. Divergences between meristic morphological characteristics and DNA barcodes revealed two cryptic species among the Cyphocharax gilbert and Astyanax gr. bimaculatus specimens, and helped to identify two overlooked species within the Gymnotus and Astyanax taxa. Therefore, using a simplified model of neotropical biodiversity, we tested the efficiency of an integrative taxonomy approach for species discovery, identification of cryptic diversity, and accelerating biodiversity descriptions.

  16. Quantitative Genetics Identifies Cryptic Genetic Variation Involved in the Paternal Regulation of Seed Development.

    Directory of Open Access Journals (Sweden)

    Nuno D Pires

    2016-01-01

    Full Text Available Embryonic development requires a correct balancing of maternal and paternal genetic information. This balance is mediated by genomic imprinting, an epigenetic mechanism that leads to parent-of-origin-dependent gene expression. The parental conflict (or kinship theory proposes that imprinting can evolve due to a conflict between maternal and paternal alleles over resource allocation during seed development. One assumption of this theory is that paternal alleles can regulate seed growth; however, paternal effects on seed size are often very low or non-existent. We demonstrate that there is a pool of cryptic genetic variation in the paternal control of Arabidopsis thaliana seed development. Such cryptic variation can be exposed in seeds that maternally inherit a medea mutation, suggesting that MEA acts as a maternal buffer of paternal effects. Genetic mapping using recombinant inbred lines, and a novel method for the mapping of parent-of-origin effects using whole-genome sequencing of segregant bulks, indicate that there are at least six loci with small, paternal effects on seed development. Together, our analyses reveal the existence of a pool of hidden genetic variation on the paternal control of seed development that is likely shaped by parental conflict.

  17. Molecules and morphology reveal cryptic variation among digeneans infecting sympatric mullets in the Mediterranean.

    Science.gov (United States)

    Blasco-Costa, I; Balbuena, J A; Raga, J A; Kostadinova, A; Olson, P D

    2010-02-01

    We applied a combined molecular and morphological approach to resolve the taxonomic status of Saccocoelium spp. parasitizing sympatric mullets (Mugilidae) in the Mediterranean. Eight morphotypes of Saccocoelium were distinguished by means of multivariate statistical analyses: 2 of Saccocoelium obesum ex Liza spp.; 4 of S. tensum ex Liza spp.; and 2 (S. cephali and Saccocoelium sp.) ex Mugil cephalus. Sequences of the 28S and ITS2 rRNA gene regions were obtained for a total of 21 isolates of these morphotypes. Combining sequence data analysis with a detailed morphological and multivariate morphometric study of the specimens allowed the demonstration of cryptic diversity thus rejecting the hypothesis of a single species of Saccocoelium infecting sympatric mullets in the Mediterranean. Comparative sequence analysis revealed 4 unique genotypes, thus corroborating the distinct species status of Saccocoelium obesum, S. tensum and S. cephali and a new cryptic species ex Liza aurata and L. saliens recognized by its consistent morphological differentiation and genetic divergence. However, in spite of their sharp morphological difference the 2 morphotypes from M. cephalus showed no molecular differentiation and 4 morphotypes of S. tensum were genetically identical. This wide intraspecific morphological variation within S. tensum and S. cephali suggests that delimiting species of Saccocoelium using solely morphological criteria will be misleading.

  18. Grey leaves in an alpine plant: a cryptic colouration to avoid attack?

    Science.gov (United States)

    Niu, Yang; Chen, Gao; Peng, De-Li; Song, Bo; Yang, Yang; Li, Zhi-Min; Sun, Hang

    2014-08-01

    Cryptic colouration is a common predation-avoidance strategy in animals that is postulated to occur in plants, but few experimental studies have rigorously tested this hypothesis. We investigated the colouration of Corydalis benecincta, an alpine plant with remarkably dimorphic leaf colours (grey and green), based on a cost-benefit analysis. First we tested the premise that herbivores (Parnassius butterflies) cannot distinguish grey leaves from a scree background by spectrographic measurements and by estimating discriminability between leaves and scree using a butterfly colour vision model. Then we estimated the potential costs of inconspicuousness by comparing the photosynthetic performance and visual attractiveness to flower visitors of the two colour morphs. Finally, we examined the potential benefits of inconspicuousness by comparing damage, survivorship and female reproductive success. It is difficult for herbivores to distinguish grey-coloured morphs against the background. This grey colour originates in a combination of anthocyanins and chlorophylls. The two colour morphs had similar photosynthetic performance, visual attractiveness and female reproductive success. However, grey morphs had significantly lower herbivore damage and higher survivorship. Grey leaves benefit C. benecincta by reducing herbivory with low investment in anthocyanin synthesis, and little cost on photosynthesis and mating opportunity. This cryptic colouration may have evolved through selection pressure imposed by visually foraging herbivores.

  19. Cryptic Transcription and Early Termination in the Control of Gene Expression

    Directory of Open Access Journals (Sweden)

    Jessie Colin

    2011-01-01

    Full Text Available Recent studies on yeast transcriptome have revealed the presence of a large set of RNA polymerase II transcripts mapping to intergenic and antisense regions or overlapping canonical genes. Most of these ncRNAs (ncRNAs are subject to termination by the Nrd1-dependent pathway and rapid degradation by the nuclear exosome and have been dubbed cryptic unstable transcripts (CUTs. CUTs are often considered as by-products of transcriptional noise, but in an increasing number of cases they play a central role in the control of gene expression. Regulatory mechanisms involving expression of a CUT are diverse and include attenuation, transcriptional interference, and alternative transcription start site choice. This review focuses on the impact of cryptic transcription on gene expression, describes the role of the Nrd1-complex as the main actor in preventing nonfunctional and potentially harmful transcription, and details a few systems where expression of a CUT has an essential regulatory function. We also summarize the most recent studies concerning other types of ncRNAs and their possible role in regulation.

  20. Use of a deformable atlas to identify cryptic critical structures in the treatment of glioblastoma multiforme.

    Directory of Open Access Journals (Sweden)

    David C Weksberg

    Full Text Available Dose constraints for traditional neural critical structures (e.g. optic chiasm, brain stem are a standard component of planning radiation therapy to the central nervous system. Increasingly, investigators are becoming interested in accounting for the dose delivered to other non-target neural structures (e.g. hippocampi, which are not easily identified on axial imaging. In this pilot study, a commercially available digital atlas was used to identify cryptic neural structures (hippocampus, optic radiations, and visual cortices in 6 patients who received intensity modulated radiation therapy (IMRT as part of multimodal management of glioblastoma multiforme (GBM. The patient's original IMRT plans were re-optimized, with avoidance parameters for the newly identified critical structures. Re-optimization was able to reduce both mean and maximum dose to the volumes of interest, with a more pronounced effect for contralateral structures. Mean dose was reduced by 11% and 3% to contralateral and ipsilateral structures, respectively, with comparable reduction in maximum dose of 10% and 2%, respectively. Importantly, target coverage was not compromised, with an average change in coverage of 0.2%. Overall, our results demonstrate the feasibility of incorporating tools for cryptic critical structure identification into the treatment planning process for GBM.

  1. Molecular cytogenetic search for cryptic sex chromosomes in painted turtles Chrysemys picta.

    Science.gov (United States)

    Valenzuela, Nicole; Badenhorst, Daleen; Montiel, Eugenia E; Literman, Robert

    2014-01-01

    Sex determination is triggered by factors ranging from genotypic (GSD) to environmental (ESD), or both GSD + EE (GSD susceptible to environmental effects), and its evolution remains enigmatic. The presence/absence of sex chromosomes purportedly separates species at the ESD end of the continuum from the rest (GSD and GSD + EE) because the evolutionary dynamics of sex chromosomes and autosomes differ. However, studies suggest that turtles with temperature-dependent sex determination (TSD) are cryptically GSD and possess sex chromosomes. Here, we test this hypothesis in painted turtles Chrysemys picta (TSD), using comparative-genome-hybridization (CGH), a technique known to detect morphologically indistinguishable sex chromosomes in other turtles and reptiles. Our results show no evidence for the existence of sex chromosomes in painted turtles. While it remains plausible that cryptic sex chromosomes may exist in TSD turtles that are characterized by minor genetic differences that cannot be detected at the resolution of CGH, previous attempts have failed to identify sex-specific markers. Genomic sequencing should prove useful in providing conclusive evidence in this regard. If such efforts uncover sex chromosomes in TSD turtles, it may reveal the existence of a fundamental constraint for the evolution of a full spectrum of sex determination (from pure GSD to pure TSD) that is predicted theoretically. Finding sex chromosomes in ESD organisms would question whether pure ESD mechanisms exist at all in nature, or whether those systems currently considered pure ESD simply await the characterization of an underlying GSD architecture.

  2. Biased exon/intron distribution of cryptic and de novo 3' splice sites.

    Science.gov (United States)

    Královicová, Jana; Christensen, Mikkel B; Vorechovský, Igor

    2005-01-01

    We compiled sequences of previously published aberrant 3' splice sites (3'ss) that were generated by mutations in human disease genes. Cryptic 3'ss, defined here as those resulting from a mutation of the 3'YAG consensus, were more frequent in exons than in introns. They clustered in approximately 20 nt region adjacent to authentic 3'ss, suggesting that their under-representation in introns is due to a depletion of AG dinucleotides in the polypyrimidine tract (PPT). In contrast, most aberrant 3'ss that were induced by mutations outside the 3'YAG consensus (designated 'de novo') were in introns. The activation of intronic de novo 3'ss was largely due to AG-creating mutations in the PPT. In contrast, exonic de novo 3'ss were more often induced by mutations improving the PPT, branchpoint sequence (BPS) or distant auxiliary signals, rather than by direct AG creation. The Shapiro-Senapathy matrix scores had a good prognostic value for cryptic, but not de novo 3'ss. Finally, AG-creating mutations in the PPT that produced aberrant 3'ss upstream of the predicted BPS in vivo shared a similar 'BPS-new AG' distance. Reduction of this distance and/or the strength of the new AG PPT in splicing reporter pre-mRNAs improved utilization of authentic 3'ss, suggesting that AG-creating mutations that are located closer to the BPS and are preceded by weaker PPT may result in less severe splicing defects.

  3. Exceptional cryptic diversity and multiple origins of parthenogenesis in a freshwater ostracod.

    Science.gov (United States)

    Bode, S N S; Adolfsson, S; Lamatsch, D K; Martins, M J F; Schmit, O; Vandekerkhove, J; Mezquita, F; Namiotko, T; Rossetti, G; Schön, I; Butlin, R K; Martens, K

    2010-02-01

    The persistence of asexual reproduction in many taxa depends on a balance between the origin of new asexual lineages and the extinction of old ones. This turnover determines the diversity of extant asexual populations and so influences the interaction between sexual and asexual modes of reproduction. Species with mixed reproduction, like the freshwater ostracod (Crustacea) morphospecies Eucypris virens, are a good model to examine these dynamics. This species is also a geographic parthenogen, in which sexual females and males co-exist with asexual females in the circum-Mediterranean area only, whereas asexual females occur all over Europe. A molecular phylogeny of E. virens based on the mitochondrial COI and 16S fragments is presented. It is characterised by many distinct clusters of haplotypes which are either exclusively sexual or asexual, with only one exception, and are often separated by deep branches. Analysis of the phylogeny reveals an astonishing cryptic diversity, which indicates the existence of a species complex with more than 40 cryptic taxa. We therefore suggest a revision of the single species status of E. virens. The phylogeny indicates multiple transitions from diverse sexual ancestor populations to asexuality. Although many transitions appear to be ancient, we argue that this may be an artefact of the existence of unsampled or extinct sexual lineages. Copyright (c) 2009 Elsevier Inc. All rights reserved.

  4. Structural similarity and distribution of small cryptic plasmids of Lactobacillus curvatus and L. sake.

    Science.gov (United States)

    Vogel, R F; Lohmann, M; Weller, A N; Hugas, M; Hammes, W P

    1991-11-15

    Plasmid profiles of strains of Lactobacillus curvatus and L. sake isolated from meat or sauerkraut were analysed to investigate plasmid homology and distribution in relation to the ecology of these organisms in fermenting foods. A hybridisation probe was constructed by cloning of pLc2, a cryptic, 2.6-kbp plasmid from L. curvatus LTH683, into the Escherichia coli plasmid pRV50. In Southern hybridisations with the digoxygenine labeled pLc2 probe, pLc2-related small plasmids were frequently detected in meat-borne strains of L. casei subsp. pseudoplantarum, L. curvatus, L. sake, L. alimentarius, L. farciminis and L. halotolerans and in L. curvatus and L. sake isolated from sauerkraut. Among 27 Lactobacillus type strains originally isolated from habitats other than meat this type of homology was detected only with plasmids of L. buchneri and L. mali. Restriction-enzyme mapping of six small cryptic plasmids from L. curvatus and L. sake revealed strong structural homology but no similarity to previously characterized plasmids of lactobacilli. The presence of a variable region in addition to a conserved one and the occurrence of deletions during cloning of pLc2 suggest that vectors derived from these plasmids are likely to be structurally unstable.

  5. Procedures for Testing Color Vision,

    Science.gov (United States)

    1981-01-01

    uased on the principles of Helmholtz’s theory of color vision. Helmholtz (1866) had tentatively proposed that color blindness could manifest itself in...purple) specifically to detect the three proposed types of color blindness . As a result, the Holmgren test is based on an erroneous and misleading set...of color blindness categories and an unwise choice of test and match skeins. Pseudoisochromatic plates were first introduced by Stilling (1873). The

  6. Artificial color perception using microwaves

    OpenAIRE

    Choudhury, Debesh; Caulfield, H. John

    2013-01-01

    We report the feasibility of artificial color perception under microwave illumination using a standard microwave source and an antenna. We have sensed transmitted microwave power through color objects and have distinguished the colors by analyzing the sensed transmitted power. Experiments are carried out using a Gunn diode as the microwave source, some colored liquids as the objects and a microwave diode as the detector. Results are presented which open up an unusual but new way of perceiving...

  7. The chemical history of color

    CERN Document Server

    Orna, Mary Virginia

    2014-01-01

    In this brief, Mary Virginia Orna details the history of color from the chemical point of view. Beginning with the first recorded uses of color and ending in the development of our modern chemical industry, this rich, yet concise exposition shows us how color pervades every aspect of our lives. Our consciousness, our perceptions, our useful appliances and tools, our playthings, our entertainment, our health, and our diagnostic apparatus - all involve color and are based in no small part on chemistry.

  8. Wetting in Color

    Science.gov (United States)

    Burgess, Ian Bruce

    Colorimetric litmus tests such as pH paper have enjoyed wide commercial success due to their inexpensive production and exceptional ease of use. However, expansion of colorimetry to new sensing paradigms is challenging because macroscopic color changes are seldom coupled to arbitrary differences in the physical/chemical properties of a system. In this thesis I present in detail the development of Wetting in Color Technology, focusing primarily on its application as an inexpensive and highly selective colorimetric indicator for organic liquids. The technology exploits chemically-encoded inverse-opal photonic crystals to control the infiltration of fluids to liquid-specific spatial patterns, projecting minute differences in liquids' wettability to macroscopically distinct, easy-to-visualize structural color patterns. It is shown experimentally and corroborated with theoretical modeling using percolation theory that the high selectivity of wetting, upon-which the sensitivity of the indicator relies, is caused by the highly symmetric structure of our large-area, defect-free SiO2 inverse-opals. The regular structure also produces a bright iridescent color, which disappears when infiltrated with liquid - naturally coupling the optical and fluidic responses. Surface modification protocols are developed, requiring only silanization and selective oxidation, to facilitate the deterministic design of an indicator that differentiates a broad range of liquids. The resulting tunable, built-in horizontal and vertical chemistry gradients allow the wettability threshold to be tailored to specific liquids across a continuous range, and make the readout rely only on countable color differences. As wetting is a generic fluidic phenomenon, Wetting in Color technology could be suitable for applications in authentication or identification of unknown liquids across a broad range of industries. However, the generic nature of the response also ensures chemical non-specificity. It is shown

  9. Characterization of color texture: color texture based sorting of tiles

    Science.gov (United States)

    Bourada, Y.; Lafon, Dominique; Eterradossi, O.

    1998-09-01

    Many materials used by the building industry show a color texture which affects the product commercial value. This texture can be seen as the spatial arrangement of regions of acceptable color differences. This work describes an appearance based automated sorting via color texture analysis, using ceramic tiles as example. Textural analysis of the tiles digital images expressed in CIEL*a*b* color system is performed through the analysis of intrinsic features of each region and relationships between regions. Results obtained through the automated process are compared to a visual sorting which leads to calculation of application dependant color and texture tolerances.

  10. Color texture measurement and segmentation

    NARCIS (Netherlands)

    Hoang, M.A.; Geusebroek, J.M.; Smeulders, A.W.M.

    2005-01-01

    In computer vision, meaurement of image properties such as color or texture is essential. In this paper, we propose a solid framework for the local measurement of texture in color images. We give a physical basis for the integration of the well-known Gabor filters with the measurement of color. Our

  11. Progress in color night vision

    NARCIS (Netherlands)

    Toet, A.; Hogervorst, M.A.

    2012-01-01

    We present an overview of our recent progress and the current state-of-the-art techniques of color image fusion for night vision applications. Inspired by previously developed color opponent fusing schemes, we initially developed a simple pixel-based false color-mapping scheme that yielded fused

  12. Color Addition and Subtraction Apps

    Science.gov (United States)

    Ruiz, Frances; Ruiz, Michael J.

    2015-01-01

    Color addition and subtraction apps in HTML5 have been developed for students as an online hands-on experience so that they can more easily master principles introduced through traditional classroom demonstrations. The evolution of the additive RGB color model is traced through the early IBM color adapters so that students can proceed step by step…

  13. Progress in color night vision

    NARCIS (Netherlands)

    Toet, A.; Hogervorst, M.A.

    2012-01-01

    We present an overview of our recent progress and the current state-of-the-art techniques of color image fusion for night vision applications. Inspired by previously developed color opponent fusing schemes, we initially developed a simple pixel-based false color-mapping scheme that yielded fused fal

  14. Color Addition and Subtraction Apps

    Science.gov (United States)

    Ruiz, Frances; Ruiz, Michael J.

    2015-01-01

    Color addition and subtraction apps in HTML5 have been developed for students as an online hands-on experience so that they can more easily master principles introduced through traditional classroom demonstrations. The evolution of the additive RGB color model is traced through the early IBM color adapters so that students can proceed step by step…

  15. Progress in color night vision

    NARCIS (Netherlands)

    Toet, A.; Hogervorst, M.A.

    2012-01-01

    We present an overview of our recent progress and the current state-of-the-art techniques of color image fusion for night vision applications. Inspired by previously developed color opponent fusing schemes, we initially developed a simple pixel-based false color-mapping scheme that yielded fused fal

  16. Astronomy with the Color Blind

    Science.gov (United States)

    Smith, Donald A.; Melrose, Justyn

    2014-01-01

    The standard method to create dramatic color images in astrophotography is to record multiple black and white images, each with a different color filter in the optical path, and then tint each frame with a color appropriate to the corresponding filter. When combined, the resulting image conveys information about the sources of emission in the…

  17. Image indexing using color correlograms

    Science.gov (United States)

    Huang, Jing; Kumar, Shanmugasundaram Ravi; Mitra, Mandar; Zhu, Wei-Jing

    2001-01-01

    A color correlogram is a three-dimensional table indexed by color and distance between pixels which expresses how the spatial correlation of color changes with distance in a stored image. The color correlogram may be used to distinguish an image from other images in a database. To create a color correlogram, the colors in the image are quantized into m color values, c.sub.i . . . c.sub.m. Also, the distance values k.epsilon.[d] to be used in the correlogram are determined where [d] is the set of distances between pixels in the image, and where dmax is the maximum distance measurement between pixels in the image. Each entry (i, j, k) in the table is the probability of finding a pixel of color c.sub.i at a selected distance k from a pixel of color c.sub.i. A color autocorrelogram, which is a restricted version of the color correlogram that considers color pairs of the form (i,i) only, may also be used to identify an image.

  18. Typography, Color, and Information Structure.

    Science.gov (United States)

    Keyes, Elizabeth

    1993-01-01

    Focuses on how typography and color complement and differ from each other in signaling an underlying content structure; the synergism between typography, color, and page layout (use of white space) that aids audience understanding and use; and the characteristics of typography and of color that are most important in these contexts. (SR)

  19. Typography, Color, and Information Structure.

    Science.gov (United States)

    Keyes, Elizabeth

    1993-01-01

    Focuses on how typography and color complement and differ from each other in signaling an underlying content structure; the synergism between typography, color, and page layout (use of white space) that aids audience understanding and use; and the characteristics of typography and of color that are most important in these contexts. (SR)

  20. Can Coloring Mandalas Reduce Anxiety?

    Science.gov (United States)

    Curry, Nancy A.; Kasser, Tim

    2005-01-01

    This study examined the effectiveness of different types of art activities in the reduction of anxiety. After undergoing a brief anxiety-induction, 84 undergraduate students were randomly assigned to color a mandala, to color a plaid form, or to color on a blank piece of paper. Results demonstrated that anxiety levels declined approximately the…

  1. Solutions of Yang-Baxter equation with color parameters

    Institute of Scientific and Technical Information of China (English)

    孙晓东; 王世坤

    1995-01-01

    All solutions of Yang-Baxter equation with color parameters for six-vertex model are achieved by five solution transformations, three nondegenerate basic solutions and several degenerate basic solutions. It is shown that all solutions of Yang-Baxter equation with spectral parameter for six-vertex model are obtainable from solutions of Yang-Baxter equation with color parameters for six-vertex model.

  2. Structural color in Myxomycetes.

    Science.gov (United States)

    Inchaussandague, Marina; Skigin, Diana; Carmaran, Cecilia; Rosenfeldt, Sonia

    2010-07-19

    In this paper we report evidence of structural color in Myxomycetes, a group of eukaryotic microorganisms with an uncertain taxonomic position. We investigated the Diachea leucopoda, which belongs to the Physarales order, Myxomycetes class, and found that its peridium -protective layer that encloses the mass of spores- is basically a corrugated layer of a transparent material, which produces a multicolored pointillistic effect, characteristic of this species. Scanning (SEM) and transmission (TEM) electron microscopy techniques have been employed to characterize the samples. A simple optical model of a planar slab is proposed to calculate the reflectance. The chromaticity coordinates are obtained, and the results confirm that the color observed is a result of an interference effect.

  3. NextStation Color

    CERN Multimedia

    Steve Jobs created a NeXT generation operating system. The NeXTstation provides functionality that other computers are just providing today.The NS Color I/O cable attaches to the back of the computer on one end and on the other end the cable is split to connect to the display and the Sound Box. The Sound Box also has a keyboard signal port. Like a MAC or SUN of the same vintage, the mouse connects to the keyboard. These boxes run NEXTSTEP, which a full object-oriented OS. It has UNIX as a base and provides a gorgeous graphical interface. NEXTSTEP was also available for other platforms. They tend to run a little slow. But they have great digital sound and full color displays.

  4. COLOR- SENSITIZED SOLAR ELEMENTS

    Directory of Open Access Journals (Sweden)

    Gish R. A.

    2016-05-01

    Full Text Available Photovoltaic devices are a promising solution to the energy crisis, because they generate electricity directly from sunlight, without producing CO2. While color-sensitized batteries are the most studied element, mainly due to its low cost and high efficiency solar energy conversion into electricity. Until recently, the color-sensitized solar cells performance was less than 1%, however, the use of titanium dioxide as the anode material have greatly raised their efficiency. The advantages of titanium dioxide is primarily in the low cost, but its use provides high light capture efficiency, with external quantum efficiency (efficiency incident photon - charge, usually in the range of 60-90% using nanocrystal forms in comparison with

  5. Computing with Colored Tangles

    Directory of Open Access Journals (Sweden)

    Avishy Y. Carmi

    2015-07-01

    Full Text Available We suggest a diagrammatic model of computation based on an axiom of distributivity. A diagram of a decorated colored tangle, similar to those that appear in low dimensional topology, plays the role of a circuit diagram. Equivalent diagrams represent bisimilar computations. We prove that our model of computation is Turing complete and with bounded resources that it can decide any language in complexity class IP, sometimes with better performance parameters than corresponding classical protocols.

  6. Watermarking on Colored Images

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    The great success of internet and the ease of copying anddistributing the electronic data has presented a new challenge of how to protect the digital data. Digital watermarks have been proposed as a means for copyright protection of multimedia. Unlike the traditional visible watermark, the challenge here is to introduce a digital watermark that does not alter the quality of electronic content, while being extremely robust to attack. From the angle of signal processing, the two basic requirements for an effective watermarking scheme, robustness and transparency conflict with each other. So the digital watermark is information that is imperceptibly and robustly embedded in the host data such that it can not be removed without important degradation of images quality. This paper consists of two parts. In the first part, an authentication technique by embedding digital “watermarks” into colored images is proposed. In our approach, we embed the “watermarks” with visually recognizable patterns into the images by selectively modifying the middle-frequency coefficients of the image. In the second part, the technique of hiding a colored image into another colored one is proposed. The experimental results show that the proposed techniques successfully survive image processing operations, image cropping and the JPEG lossy compression.

  7. Coloring geographical threshold graphs

    Energy Technology Data Exchange (ETDEWEB)

    Bradonjic, Milan [Los Alamos National Laboratory; Percus, Allon [Los Alamos National Laboratory; Muller, Tobias [EINDHOVEN UNIV. OF TECH

    2008-01-01

    We propose a coloring algorithm for sparse random graphs generated by the geographical threshold graph (GTG) model, a generalization of random geometric graphs (RGG). In a GTG, nodes are distributed in a Euclidean space, and edges are assigned according to a threshold function involving the distance between nodes as well as randomly chosen node weights. The motivation for analyzing this model is that many real networks (e.g., wireless networks, the Internet, etc.) need to be studied by using a 'richer' stochastic model (which in this case includes both a distance between nodes and weights on the nodes). Here, we analyze the GTG coloring algorithm together with the graph's clique number, showing formally that in spite of the differences in structure between GTG and RGG, the asymptotic behavior of the chromatic number is identical: {chi}1n 1n n / 1n n (1 + {omicron}(1)). Finally, we consider the leading corrections to this expression, again using the coloring algorithm and clique number to provide bounds on the chromatic number. We show that the gap between the lower and upper bound is within C 1n n / (1n 1n n){sup 2}, and specify the constant C.

  8. Coloring and Guarding Arrangements

    CERN Document Server

    Bose, Prosenjit; Collette, Sébastien; Hurtado, Ferran; Korman, Matias; Langerman, Stefan; Taslakian, Perouz

    2012-01-01

    Given an arrangement of lines in the plane, what is the minimum number $c$ of colors required to color the lines so that no cell of the arrangement is monochromatic? In this paper we give bounds on the number c both for the above question, as well as some of its variations. We redefine these problems as geometric hypergraph coloring problems. If we define $\\Hlinecell$ as the hypergraph where vertices are lines and edges represent cells of the arrangement, the answer to the above question is equal to the chromatic number of this hypergraph. We prove that this chromatic number is between $\\Omega (\\log n / \\log\\log n)$. and $O(\\sqrt{n})$. Similarly, we give bounds on the minimum size of a subset $S$ of the intersections of the lines in $\\mathcal{A}$ such that every cell is bounded by at least one of the vertices in $S$. This may be seen as a problem on guarding cells with vertices when the lines act as obstacles. The problem can also be defined as the minimum vertex cover problem in the hypergraph $\\Hvertexcell$...

  9. Colored 3D surface reconstruction using Kinect sensor

    Science.gov (United States)

    Guo, Lian-peng; Chen, Xiang-ning; Chen, Ying; Liu, Bin

    2015-03-01

    A colored 3D surface reconstruction method which effectively fuses the information of both depth and color image using Microsoft Kinect is proposed and demonstrated by experiment. Kinect depth images are processed with the improved joint-bilateral filter based on region segmentation which efficiently combines the depth and color data to improve its quality. The registered depth data are integrated to achieve a surface reconstruction through the colored truncated signed distance fields presented in this paper. Finally, the improved ray casting for rendering full colored surface is implemented to estimate color texture of the reconstruction object. Capturing the depth and color images of a toy car, the improved joint-bilateral filter based on region segmentation is used to improve the quality of depth images and the peak signal-to-noise ratio (PSNR) is approximately 4.57 dB, which is better than 1.16 dB of the joint-bilateral filter. The colored construction results of toy car demonstrate the suitability and ability of the proposed method.

  10. A color based face detection system using multiple templates

    Institute of Scientific and Technical Information of China (English)

    王涛; 卜佳酸; 陈纯

    2003-01-01

    A color based system using multiple templates was developed and implemented for detecting hu-man faces in color images.The algorithm comsists of three image processing steps.The first step is human skin color statistics.Then it separates skin regions from non-skin regions.After that,it locates the frontal human face(s) within the skin regions.In the first step,250 skin samples from persons of different ethnicities are used to determine the color distribution of human skin in chromatic color space in order to get a chroma chart showing likelihoods of skin colors.This chroma chart is used to generate,from the original color image,a gray scale image whose gray value at a pixel shows its likelihood of representing the shin,The algorithm uses an adaptive thresholding process to achieve the optimal threshold value for dividing the gray scale image into sep-arate skin regions from non skin regions.Finally,multiple face templates matching is used to determine if a given skin region represents a frontal human face or not.Test of the system with more than 400 color images showed that the resulting detection rate was 83%,which is better than most colou-based face detection sys-tems.The average speed for face detection is 0.8 second/image(400×300pixels) on a Pentium 3(800MHz) PC.

  11. Quasar Classification Using Color and Variability

    CERN Document Server

    Peters, Christina M; Myers, Adam D; Strauss, Michael A; Schmidt, Kasper B; Ivezić, Željko; Ross, Nicholas P; MacLeod, Chelsea L; Riegel, Ryan

    2015-01-01

    We conduct a pilot investigation to determine the optimal combination of color and variability information to identify quasars in current and future multi-epoch optical surveys. We use a Bayesian quasar selection algorithm (Richards et al. 2004) to identify 35,820 type 1 quasar candidates in a 239 square degree field of the Sloan Digital Sky Survey (SDSS) Stripe 82, using a combination of optical photometry and variability. Color analysis is performed on 5-band single- and multi-epoch SDSS optical photometry to a depth of r ~22.4. From these data, variability parameters are calculated by fitting the structure function of each object in each band with a power law model using 10 to >100 observations over timescales from ~1 day to ~8 years. Selection was based on a training sample of 13,221 spectroscopically-confirmed type-1 quasars, largely from the SDSS. Using variability alone, colors alone, and combining variability and colors we achieve 91%, 93%, and 97% quasar completeness and 98%, 98%, and 97% efficiency ...

  12. Color imaging fundamentals and applications

    CERN Document Server

    Reinhard, Erik; Oguz Akyuz, Ahmet; Johnson, Garrett

    2008-01-01

    This book provides the reader with an understanding of what color is, where color comes from, and how color can be used correctly in many different applications. The authors first treat the physics of light and its interaction with matter at the atomic level, so that the origins of color can be appreciated. The intimate relationship between energy levels, orbital states, and electromagnetic waves helps to explain why diamonds shimmer, rubies are red, and the feathers of the Blue Jay are blue. Then, color theory is explained from its origin to the current state of the art, including image captu

  13. On Dominator Colorings in Graphs

    Indian Academy of Sciences (India)

    S Arumugam; Jay Bagga; K Raja Chandrasekar

    2012-11-01

    A dominator coloring of a graph is a proper coloring of in which every vertex dominates every vertex of at least one color class. The minimum number of colors required for a dominator coloring of is called the dominator chromatic number of and is denoted by $ d(G)$. In this paper we present several results on graphs with $ d(G)=(G)$ and $ d(G)=(G)$ where $(G)$ and $(G)$ denote respectively the chromatic number and the domination number of a graph . We also prove that if $(G)$ is the Mycielskian of , then $ d(G)+1≤ d((G))≤ d(G)+2$.

  14. Acute promyelocytic leukemia with cryptic t(15;17) on isochromosome 17: a case report and review of literature.

    Science.gov (United States)

    Tang, Yuting; Wang, Ying; Hu, Liang; Meng, Fankai; Xu, Danmei; Wan, Kai; Huang, Lifang; Li, Chunrui; Zhou, Jianfeng

    2015-01-01

    Acute Promyelocytic Leukemia (APL) is one of the most curable leukemia which shows great sensitivity to all-trans retinoic acid (ATRA) although a small number of the patients present poor prognosis and short survival. Isochromosome 17 in APL which usually bears an additional copy of RARA/PML fusion gene is considered to be a negative factor on its prognosis. Cryptic t(15;17) on i(17q) leads to an extra copy of PML/RARA rather than RARA/PML which may confer a worse prognosis. We describe here a rare APL case with complex chromosomal abnormality including isochromosome 17 bearing cryptic t(15;17) showing poor outcome. The patient lacks a classic t(15;17) and fluorescence in situ hybridization (FISH) presents 2 PML/RARA fusion signals on both long arms of the isochromosome. The patient also acquired a secondary mutation at relapse when the initial karyotype was already a complex karyotype involving chromosome 13, 17 and 22 at the same time. The poor response of this patient to traditional chemotherapy like ATRA and novel therapy like arsenic trioxide (ATO) suggests that early auto-hematological stem cell transplantation may be the choice of APL with isochromosome 17 especially with cryptic t(15;17) on i(17q). We are the first to show a clear history and evidence of FISH of these kind of cases. A small summary of cases with cryptic t(15;17) on isochromosome 17 is also made.

  15. T Cell Adaptive Immunity Proceeds through Environment-Induced Adaptation from the Exposure of Cryptic Genetic Variation

    Science.gov (United States)

    Whitacre, James M.; Lin, Joseph; Harding, Angus

    2011-01-01

    Evolution is often characterized as a process involving incremental genetic changes that are slowly discovered and fixed in a population through genetic drift and selection. However, a growing body of evidence is finding that changes in the environment frequently induce adaptations that are much too rapid to occur by an incremental genetic search process. Rapid evolution is hypothesized to be facilitated by mutations present within the population that are silent or “cryptic” within the first environment but are co-opted or “exapted” to the new environment, providing a selective advantage once revealed. Although cryptic mutations have recently been shown to facilitate evolution in RNA enzymes, their role in the evolution of complex phenotypes has not been proven. In support of this wider role, this paper describes an unambiguous relationship between cryptic genetic variation and complex phenotypic responses within the immune system. By reviewing the biology of the adaptive immune system through the lens of evolution, we show that T cell adaptive immunity constitutes an exemplary model system where cryptic alleles drive rapid adaptation of complex traits. In naive T cells, normally cryptic differences in T cell receptor reveal diversity in activation responses when the cellular population is presented with a novel environment during infection. We summarize how the adaptive immune response presents a well studied and appropriate experimental system that can be used to confirm and expand upon theoretical evolutionary models describing how seemingly small and innocuous mutations can drive rapid cellular evolution. PMID:22363338

  16. Sexual selection by cryptic female choice on male seminal products - a new bridge between sexual selection and reproductive physiology.

    Science.gov (United States)

    Eberhard, W G; Cordero, C

    1995-12-01

    Selection clearly focuses on differences in reproduction, but studies of reproductive physiology generally have been carried out in a near vacuum of modern evolutionary theory. This lack of contact between the two fields may be about to change. New ideas indicate that sexual selection by cryptic female choice has affected the evolution of products in male semen that influence female reproductive behavior and physiology.

  17. Morphometric study of third-instar larvae from five morphotypes of the Anastrepha fraterculus cryptic species complex (Diptera, Tephritidae).

    Science.gov (United States)

    Canal, Nelson A; Hernández-Ortiz, Vicente; Salas, Juan O Tigrero; Selivon, Denise

    2015-01-01

    The occurrence of cryptic species among economically important fruit flies strongly affects the development of management tactics for these pests. Tools for studying cryptic species not only facilitate evolutionary and systematic studies, but they also provide support for fruit fly management and quarantine activities. Previous studies have shown that the South American fruit fly, Anastrepha fraterculus, is a complex of cryptic species, but few studies have been performed on the morphology of its immature stages. An analysis of mandible shape and linear morphometric variability was applied to third-instar larvae of five morphotypes of the Anastrepha fraterculus complex: Mexican, Andean, Ecuadorian, Peruvian and Brazilian-1. Outline geometric morphometry was used to study the mouth hook shape and linear morphometry analysis was performed using 24 linear measurements of the body, cephalopharyngeal skeleton, mouth hook and hypopharyngeal sclerite. Different morphotypes were grouped accurately using canonical discriminant analyses of both the geometric and linear morphometry. The shape of the mandible differed among the morphotypes, and the anterior spiracle length, number of tubules of the anterior spiracle, length and height of the mouth hook and length of the cephalopharyngeal skeleton were the most significant variables in the linear morphometric analysis. Third-instar larvae provide useful characters for studies of cryptic species in the Anastrepha fraterculus complex.

  18. DNA barcode reference library for Iberian butterflies enables a continental-scale preview of potential cryptic diversity

    Science.gov (United States)

    Dincă, Vlad; Montagud, Sergio; Talavera, Gerard; Hernández-Roldán, Juan; Munguira, Miguel L.; García-Barros, Enrique; Hebert, Paul D. N.; Vila, Roger

    2015-01-01

    How common are cryptic species - those overlooked because of their morphological similarity? Despite its wide-ranging implications for biology and conservation, the answer remains open to debate. Butterflies constitute the best-studied invertebrates, playing a similar role as birds do in providing models for vertebrate biology. An accurate assessment of cryptic diversity in this emblematic group requires meticulous case-by-case assessments, but a preview to highlight cases of particular interest will help to direct future studies. We present a survey of mitochondrial genetic diversity for the butterfly fauna of the Iberian Peninsula with unprecedented resolution (3502 DNA barcodes for all 228 species), creating a reliable system for DNA-based identification and for the detection of overlooked diversity. After compiling available data for European butterflies (5782 sequences, 299 species), we applied the Generalized Mixed Yule-Coalescent model to explore potential cryptic diversity at a continental scale. The results indicate that 27.7% of these species include from two to four evolutionary significant units (ESUs), suggesting that cryptic biodiversity may be higher than expected for one of the best-studied invertebrate groups and regions. The ESUs represent important units for conservation, models for studies of evolutionary and speciation processes, and sentinels for future research to unveil hidden diversity. PMID:26205828

  19. Molecular species delimitation methods and population genetics data reveal extensive lineage diversity and cryptic species in Aglaopheniidae (Hydrozoa).

    Science.gov (United States)

    Postaire, Bautisse; Magalon, Hélène; Bourmaud, Chloé A-F; Bruggemann, J Henrich

    2016-12-01

    A comprehensive inventory of global biodiversity would be greatly improved by automating methods for species delimitation. The Automatic Barcode Gap Discovery method, the Poisson tree processes algorithm and the Generalized mixed Yule-coalescent model have been proposed as means of increasing the rate of biodiversity description using single locus data. We applied these methods to explore the diversity within the Aglaopheniidae, a hydrozoan family with many species widely distributed across tropical and temperate oceans. Our analyses revealed widespread cryptic diversity in this family, almost half of the morpho-species presenting several independent evolutionary lineages, as well as support for cases of synonymy. For two common species of this family, Lytocarpia brevirostris and Macrorhynchia phoenicea, we compared the outputs to clustering analyses based on microsatellite data and to nuclear gene phylogenies. For L. brevirostris, microsatellite data were congruent with results of the species delimitation methods, revealing the existence of two cryptic species with Indo-Pacific distribution. For M. phoenicea, all analyses confirmed the presence of two cryptic species within the South-Western Indian Ocean. Our study suggests that the diversity of Aglaopheniidae might be much higher than assumed, likely related to low dispersal capacities. Sequence-based species delimitation methods seem highly valuable to reveal cryptic diversity in hydrozoans; their application in an integrative framework will be very useful in describing the phyletic diversity of these organisms. Copyright © 2016 Elsevier Inc. All rights reserved.

  20. Cryptic speciation in the recently discovered American cycliophoran Symbion americanus; genetic structure and population expansion

    DEFF Research Database (Denmark)

    Baker, J.M.; Funch, Peter; Giribet, G.

    2007-01-01

    and January 2006. Cytochrome c oxidase subunit I sequence data clearly suggested the presence of three cryptic lineages in a species complex, often co-occurring in the same lobster specimens. One of these lineages, named the "G" lineage, was represented by very few individuals and therefore was excluded from...

  1. Monophyly, distance and character-based multigene barcoding reveal extraordinary cryptic diversity in Nassarius: a complex and dangerous community.

    Directory of Open Access Journals (Sweden)

    Shanmei Zou

    Full Text Available BACKGROUND: Correct identification and cryptic biodiversity revelation for marine organisms are pressing since the marine life is important in maintaining the balance of ecological system and is facing the problem of biodiversity crisis or food safety. DNA barcoding has been proved successful to provide resolution beyond the boundaries of morphological information. Nassarius, the common mudsnail, plays an important role in marine environment and has problem in food safety, but the classification of it is quite confused because of the complex morphological diversity. METHODOLOGY/PRINCIPAL FINDINGS: Here we report a comprehensive barcoding analysis of 22 Nassarius species. We integrated the mitochondrial and nuclear sequences and the morphological characters to determine 13 Nassarius species studied and reveal four cryptic species and one pair synonyms. Distance, monophyly, and character-based barcoding methods were employed. CONCLUSIONS/SIGNIFICANCE: Such successful identification and unexpected cryptic discovery is significant for Nassarius in food safety and species conversation and remind us to pay more attention to the hidden cryptic biodiversity ignored in marine life. Distance, monophyly, and character-based barcoding methods are all very helpful in identification but the character-based method shows some advantages.

  2. DNA barcode reference library for Iberian butterflies enables a continental-scale preview of potential cryptic diversity.

    Science.gov (United States)

    Dincă, Vlad; Montagud, Sergio; Talavera, Gerard; Hernández-Roldán, Juan; Munguira, Miguel L; García-Barros, Enrique; Hebert, Paul D N; Vila, Roger

    2015-07-24

    How common are cryptic species--those overlooked because of their morphological similarity? Despite its wide-ranging implications for biology and conservation, the answer remains open to debate. Butterflies constitute the best-studied invertebrates, playing a similar role as birds do in providing models for vertebrate biology. An accurate assessment of cryptic diversity in this emblematic group requires meticulous case-by-case assessments, but a preview to highlight cases of particular interest will help to direct future studies. We present a survey of mitochondrial genetic diversity for the butterfly fauna of the Iberian Peninsula with unprecedented resolution (3502 DNA barcodes for all 228 species), creating a reliable system for DNA-based identification and for the detection of overlooked diversity. After compiling available data for European butterflies (5782 sequences, 299 species), we applied the Generalized Mixed Yule-Coalescent model to explore potential cryptic diversity at a continental scale. The results indicate that 27.7% of these species include from two to four evolutionary significant units (ESUs), suggesting that cryptic biodiversity may be higher than expected for one of the best-studied invertebrate groups and regions. The ESUs represent important units for conservation, models for studies of evolutionary and speciation processes, and sentinels for future research to unveil hidden diversity.

  3. A quantitative theory of human color choices

    National Research Council Canada - National Science Library

    Komarova, Natalia L; Jameson, Kimberly A

    2013-01-01

    ... color standards are important. Still, with regard to color appearance many perceptual and cognitive factors are known to contribute to color similarity, and, in general, to all cognitive judgments of color...

  4. The modern Japanese color lexicon.

    Science.gov (United States)

    Kuriki, Ichiro; Lange, Ryan; Muto, Yumiko; Brown, Angela M; Fukuda, Kazuho; Tokunaga, Rumi; Lindsey, Delwin T; Uchikawa, Keiji; Shioiri, Satoshi

    2017-03-01

    Despite numerous prior studies, important questions about the Japanese color lexicon persist, particularly about the number of Japanese basic color terms and their deployment across color space. Here, 57 native Japanese speakers provided monolexemic terms for 320 chromatic and 10 achromatic Munsell color samples. Through k-means cluster analysis we revealed 16 statistically distinct Japanese chromatic categories. These included eight chromatic basic color terms (aka/red, ki/yellow, midori/green, ao/blue, pink, orange, cha/brown, and murasaki/purple) plus eight additional terms: mizu ("water")/light blue, hada ("skin tone")/peach, kon ("indigo")/dark blue, matcha ("green tea")/yellow-green, enji/maroon, oudo ("sand or mud")/mustard, yamabuki ("globeflower")/gold, and cream. Of these additional terms, mizu was used by 98% of informants, and emerged as a strong candidate for a 12th Japanese basic color term. Japanese and American English color-naming systems were broadly similar, except for color categories in one language (mizu, kon, teal, lavender, magenta, lime) that had no equivalent in the other. Our analysis revealed two statistically distinct Japanese motifs (or color-naming systems), which differed mainly in the extension of mizu across our color palette. Comparison of the present data with an earlier study by Uchikawa & Boynton (1987) suggests that some changes in the Japanese color lexicon have occurred over the last 30 years.

  5. Differences in life-histories refute ecological equivalence of cryptic species and provide clues to the origin of bathyal Halomonhystera (Nematoda.

    Directory of Open Access Journals (Sweden)

    Jelle Van Campenhout

    Full Text Available The discovery of morphologically very similar but genetically distinct species complicates a proper understanding of the link between biodiversity and ecosystem functioning. Cryptic species have been frequently observed to co-occur and are thus expected to be ecological equivalent. The marine nematode Halomonhystera disjuncta contains five cryptic species (GD1-5 that co-occur in the Westerschelde estuary. In this study, we investigated the effect of three abiotic factors (salinity, temperature and sulphide on life-history traits of three cryptic H. disjuncta species (GD1-3. Our results show that temperature had the most profound influence on all life-cycle parameters compared to a smaller effect of salinity. Life-history traits of closely related cryptic species were differentially affected by temperature, salinity and presence of sulphides which shows that cryptic H. disjuncta species are not ecologically equivalent. Our results further revealed that GD1 had the highest tolerance to a combination of sulphides, high salinities and low temperatures. The close phylogenetic position of GD1 to Halomonhystera hermesi, the dominant species in sulphidic sediments of the Håkon Mosby mud volcano (Barent Sea, 1280 m depth, indicates that both species share a recent common ancestor. Differential life-history responses to environmental changes among cryptic species may have crucial consequences for our perception on ecosystem functioning and coexistence of cryptic species.

  6. Differences in life-histories refute ecological equivalence of cryptic species and provide clues to the origin of bathyal Halomonhystera (Nematoda).

    Science.gov (United States)

    Van Campenhout, Jelle; Derycke, Sofie; Moens, Tom; Vanreusel, Ann

    2014-01-01

    The discovery of morphologically very similar but genetically distinct species complicates a proper understanding of the link between biodiversity and ecosystem functioning. Cryptic species have been frequently observed to co-occur and are thus expected to be ecological equivalent. The marine nematode Halomonhystera disjuncta contains five cryptic species (GD1-5) that co-occur in the Westerschelde estuary. In this study, we investigated the effect of three abiotic factors (salinity, temperature and sulphide) on life-history traits of three cryptic H. disjuncta species (GD1-3). Our results show that temperature had the most profound influence on all life-cycle parameters compared to a smaller effect of salinity. Life-history traits of closely related cryptic species were differentially affected by temperature, salinity and presence of sulphides which shows that cryptic H. disjuncta species are not ecologically equivalent. Our results further revealed that GD1 had the highest tolerance to a combination of sulphides, high salinities and low temperatures. The close phylogenetic position of GD1 to Halomonhystera hermesi, the dominant species in sulphidic sediments of the Håkon Mosby mud volcano (Barent Sea, 1280 m depth), indicates that both species share a recent common ancestor. Differential life-history responses to environmental changes among cryptic species may have crucial consequences for our perception on ecosystem functioning and coexistence of cryptic species.

  7. Color image and video enhancement

    CERN Document Server

    Lecca, Michela; Smolka, Bogdan

    2015-01-01

    This text covers state-of-the-art color image and video enhancement techniques. The book examines the multivariate nature of color image/video data as it pertains to contrast enhancement, color correction (equalization, harmonization, normalization, balancing, constancy, etc.), noise removal and smoothing. This book also discusses color and contrast enhancement in vision sensors and applications of image and video enhancement.   ·         Focuses on enhancement of color images/video ·         Addresses algorithms for enhancing color images and video ·         Presents coverage on super resolution, restoration, in painting, and colorization.

  8. Structural Colors from Fano Resonances

    CERN Document Server

    Shen, Yichen; Wang, Imbert; Stelmakh, Veronika; Joannopoulos, John D; Soljacic, Marin

    2014-01-01

    Structural coloration is an interference phenomenon where colors emerge when visible light interacts with nanoscopically structured material, and has recently become a most interesting scientific and engineering topic. However, current structural color generation mechanisms either require thick (compared to the wavelength) structures or lack dynamic tunability. This report proposes a new structural color generation mechanism, that produces colors by the Fano resonance effect on thin photonic crystal slab. We experimentally realize the proposed idea by fabricating the samples that show resonance-induced colors with weak dependence on the viewing angle. Finally, we show that the resonance-induced colors can be dynamically tuned by stretching the photonic crystal slab fabricated on an elastic substrate.

  9. Color stabilizes textbook visual processing

    Science.gov (United States)

    Paeglis, Roberts; Orlovska, Madara; Bluss, Kristaps

    2011-05-01

    We report that pages with color illustrations elicit more homogeneous duration of fixations in 12 elementary school children. For six first graders, we compared the reading of the color cover and a greyscale illustrated text page of an abcbook. For six second grade pupils, we demonstrated a color and a greyscale fairytale book page. The fixations we recorded are concordant with the duration for preschoolers reported elsewhere. Average duration of fixations on a page with color elements are shorter than on greyscale ones, 425 (SE=13.4) and 461 (18.3) ms, respectively. The correlation analysis lends support that a color page is processed differently than its greyscale version. Fixation duration for color and greyscale condition was correlated neither for text (r=.567, p=.241) nor for images (r=.517, p=.294) for the second graders. Our research suggests that color elements on textbook pages encourage emergent readers to perform better in acquisition.

  10. A field guide to digital color

    CERN Document Server

    Stone, Maureen

    2013-01-01

    Maureen Stone's field guide to digital color presents a survey of digital color with special emphasis on those fields important for computer graphics. The book provides the foundation for understanding color and its applications, discusses color media and color management and the use of color in computer graphics, including color design and selection. The book provides a guide for anyone who wants to understand and apply digital color. An annotated bibliography provides in-depth references for further study on each topic.

  11. Color temperature tunable white light emitting diodes packaged with an omni-directional reflector.

    Science.gov (United States)

    Su, Jung-Chieh; Lu, Chun-Lin

    2009-11-23

    This study proposed a correlated color temperature (CCT) tunable phosphor-converted white light emitting diode (LED) with an omni-directional reflector (ODR). Applying current to each individual InGaN based ultraviolet, purple and blue source LED chip of the white LED package, we can achieve the CCT tunability. The optimum color properties of the resulting white light are (0.3347, 0.3384), 5398 K, 81, 3137-8746 K for color coordinates, CCT, color rendering index (CRI) and CCT tuning range, respectively. Roughening the ODR substrate, we solve the non-uniformity color distribution caused by the reflectance of the ODR and positioning of source LED chips.

  12. Evaluation of color mapping algorithms in different color spaces

    Science.gov (United States)

    Bronner, Timothée.-Florian; Boitard, Ronan; Pourazad, Mahsa T.; Nasiopoulos, Panos; Ebrahimi, Touradj

    2016-09-01

    The color gamut supported by current commercial displays is only a subset of the full spectrum of colors visible by the human eye. In High-Definition (HD) television technology, the scope of the supported colors covers 35.9% of the full visible gamut. For comparison, Ultra High-Definition (UHD) television, which is currently being deployed on the market, extends this range to 75.8%. However, when reproducing content with a wider color gamut than that of a television, typically UHD content on HD television, some original color information may lie outside the reproduction capabilities of the television. Efficient gamut mapping techniques are required in order to fit the colors of any source content into the gamut of a given display. The goal of gamut mapping is to minimize the distortion, in terms of perceptual quality, when converting video from one color gamut to another. It is assumed that the efficiency of gamut mapping depends on the color space in which it is computed. In this article, we evaluate 14 gamut mapping techniques, 12 combinations of two projection methods across six color spaces as well as R'G'B' Clipping and wrong gamut interpretation. Objective results, using the CIEDE2000 metric, show that the R'G'B' Clipping is slightly outperformed by only one combination of color space and projection method. However, analysis of images shows that R'G'B' Clipping can result in loss of contrast in highly saturated images, greatly impairing the quality of the mapped image.

  13. High throughput sequencing in mice: a platform comparison identifies a preponderance of cryptic SNPs

    Directory of Open Access Journals (Sweden)

    Darakjian Priscila

    2009-08-01

    Full Text Available Abstract Background Allelic variation is the cornerstone of genetically determined differences in gene expression, gene product structure, physiology, and behavior. However, allelic variation, particularly cryptic (unknown or not annotated variation, is problematic for follow up analyses. Polymorphisms result in a high incidence of false positive and false negative results in hybridization based analyses and hinder the identification of the true variation underlying genetically determined differences in physiology and behavior. Given the proliferation of mouse genetic models (e.g., knockout models, selectively bred lines, heterogeneous stocks derived from standard inbred strains and wild mice and the wealth of gene expression microarray and phenotypic studies using genetic models, the impact of naturally-occurring polymorphisms on these data is critical. With the advent of next-generation, high-throughput sequencing, we are now in a position to determine to what extent polymorphisms are currently cryptic in such models and their impact on downstream analyses. Results We sequenced the two most commonly used inbred mouse strains, DBA/2J and C57BL/6J, across a region of chromosome 1 (171.6 – 174.6 megabases using two next generation high-throughput sequencing platforms: Applied Biosystems (SOLiD and Illumina (Genome Analyzer. Using the same templates on both platforms, we compared realignments and single nucleotide polymorphism (SNP detection with an 80 fold average read depth across platforms and samples. While public datasets currently annotate 4,527 SNPs between the two strains in this interval, thorough high-throughput sequencing identified a total of 11,824 SNPs in the interval, including 7,663 new SNPs. Furthermore, we confirmed 40 missense SNPs and discovered 36 new missense SNPs. Conclusion Comparisons utilizing even two of the best characterized mouse genetic models, DBA/2J and C57BL/6J, indicate that more than half of naturally

  14. A near-infrared spectroscopy routine for unambiguous identification of cryptic ant species

    Directory of Open Access Journals (Sweden)

    Martin-Carl Kinzner

    2015-09-01

    Full Text Available Species identification—of importance for most biological disciplines—is not always straightforward as cryptic species hamper traditional identification. Fibre-optic near-infrared spectroscopy (NIRS is a rapid and inexpensive method of use in various applications, including the identification of species. Despite its efficiency, NIRS has never been tested on a group of more than two cryptic species, and a working routine is still missing. Hence, we tested if the four morphologically highly similar, but genetically distinct ant species Tetramorium alpestre, T. caespitum, T. impurum, and T. sp. B, all four co-occurring above 1,300 m above sea level in the Alps, can be identified unambiguously using NIRS. Furthermore, we evaluated which of our implementations of the three analysis approaches, partial least squares regression (PLS, artificial neural networks (ANN, and random forests (RF, is most efficient in species identification with our data set. We opted for a 100% classification certainty, i.e., a residual risk of misidentification of zero within the available data, at the cost of excluding specimens from identification. Additionally, we examined which strategy among our implementations, one-vs-all, i.e., one species compared with the pooled set of the remaining species, or binary-decision strategies, worked best with our data to reduce a multi-class system to a two-class system, as is necessary for PLS. Our NIRS identification routine, based on a 100% identification certainty, was successful with up to 66.7% of unambiguously identified specimens of a species. In detail, PLS scored best over all species (36.7% of specimens, while RF was much less effective (10.0% and ANN failed completely (0.0% with our data and our implementations of the analyses. Moreover, we showed that the one-vs-all strategy is the only acceptable option to reduce multi-class systems because of a minimum expenditure of time. We emphasise our classification routine using

  15. Cryptic diversity of the bent-wing bat, Miniopterus schreibersii (Chiroptera: Vespertilionidae, in Asia Minor

    Directory of Open Access Journals (Sweden)

    Öztunç Tunç

    2010-04-01

    Full Text Available Abstract Background Two or more species are cryptic, if they are morphologically similar, biologically distinct, and misclassified as a single species. Cryptic species complexes were recently discovered within many bat species and we suspect that the bent-wing bat, Miniopterus schreibersii, found in Europe, northern Africa, and Asia Minor, could also form such a complex. Populations of M. schreibersii decline in most of the European countries and the species is currently listed as Near Threatened in the IUCN Red List. Finding that M. schreibersii is not a single species, but a species complex, would have a considerable impact on its conservation strategies, as the abundance of each component taxon would be much smaller than the one estimated for the nominal species. Results Miniopterus schreibersii in Asia Minor consists of two genetically diverged lineages, which are reciprocally monophyletic on three mitochondrial DNA markers, have a diagnostic set of multilocus allele frequencies, and show a marked difference in their population structures. The lineages differ slightly in their size, wing shape, and echolocation call parameters. Although these differences are sufficient to discriminate between the lineages, they are not fully diagnostic in reference to individuals. We suggest that the lineages endured the major Northern Hemisphere glaciations in different glacial refugia and colonized Asia Minor after the last glacial maximum. The lineages are allopatric, which is neither delineated by the presence of geographical barriers nor associated with the specific climatic conditions, and which we link to competitive exclusion. Conclusions The distinctions between the lineages comply with most of the criteria required for species delineation imposed by various species concepts. Accordingly, we conclude that M. schreibersii in Asia Minor is represented by two cryptic species. Our results imply that the distributional range of the nominal species is

  16. 7 CFR 51.892 - Color terms.

    Science.gov (United States)

    2010-01-01

    ... 7 Agriculture 2 2010-01-01 2010-01-01 false Color terms. 51.892 Section 51.892 Agriculture... Standards for Grades of Table Grapes (European or Vinifera Type) 1 Definitions § 51.892 Color terms. The color terms well colored, reasonably well colored, and fairly well colored are defined in Table...

  17. The Academic Achievement Gap: The Suburban Challenge. CSR Connection.

    Science.gov (United States)

    Alson, Allan

    Suburban schoolchildren of color, in the aggregate, do not perform as well as their white counterparts. In fact, the academic achievement gaps in many suburban communities are actually greater than those in urban school districts. This research brief looks at the achievement gap in suburban schools, offering preliminary answers to the following…

  18. Color Appearance of the Neon Color Spreading Effect

    Directory of Open Access Journals (Sweden)

    Damir Vusić

    2016-07-01

    Full Text Available As a part of this paper, the influence of various parameters within the target process of graphic reproduction on the color appearance of the neon color spreading effect was investigated. The shift in a color appearance qualitatively is determined through the calculation of changes in perceptual attributes of color, i.e. differences in lightness, chroma and hue. The influence of different media (printed images, and LCD display in the “cross-media” system was examined, as well as the role of the inserted segment color choice and background of the primary stimulus as an element of design solutions. These parameters were evaluated in a variety of ambient conditions and under the observation of three CIE standard light sources and illuminants. It was found that it was mostly the changes of the chroma and lightness. The change in the color hue is the lowest.

  19. Regional principal color based saliency detection.

    Directory of Open Access Journals (Sweden)

    Jing Lou

    Full Text Available Saliency detection is widely used in many visual applications like image segmentation, object recognition and classification. In this paper, we will introduce a new method to detect salient objects in natural images. The approach is based on a regional principal color contrast modal, which incorporates low-level and medium-level visual cues. The method allows a simple computation of color features and two categories of spatial relationships to a saliency map, achieving higher F-measure rates. At the same time, we present an interpolation approach to evaluate resulting curves, and analyze parameters selection. Our method enables the effective computation of arbitrary resolution images. Experimental results on a saliency database show that our approach produces high quality saliency maps and performs favorably against ten saliency detection algorithms.

  20. Spatial processing in color reproduction

    Science.gov (United States)

    Liu, Li; Yang, Yongyi; Stark, Henry

    2005-08-01

    We consider the reproduction of color subject to material and neighborhood constraints. By 'material constraints,' we mean any constraints that are applied to the amount of ink, lights, voltages, and currents that are used in the generation of color. In the first instance we consider the problem of reproducing a target color constrained by maximum additive color signals, such as in the phosphorescence process in a cathode ray tube. In the second instance we consider the more difficult problem of reproducing color subject to constraints on the maximum primary color variations in a (spatial) neighborhood. We introduce the idea of adjacent color variance (ACV) and then attempt to reproduce colors subject to an upper bound on the ACV. An algorithm that is suitable for this task is the method of vector space projections (VSP). In order to use VSP for constrained color reproduction, we use a novel approach to linearize nonlinear CIE-Lab space constraints. Experimental results are furnished that demonstrate that using the ACV as a bound helps to reduce reproduction artifacts in a color image.

  1. Prevalent Color Extraction and Indexing

    Directory of Open Access Journals (Sweden)

    K.K.Thyagharajan

    2014-01-01

    Full Text Available Colors in an image provides tremendous amount of information. Using this color information images can be segmented, analyzed, labeled and indexed. In content based image retrieval system, color is one of the basic primitive features used. In Prevalent Color Extraction and indexing, the most extensive color on an image is identified and it is used for indexing. For implementation, Asteroideae flower family image dataset is used. It consist of more than 16,000 species, among them nearly 100 species are considered and indexed by dominating colors. To extract the most appealable color from the user defined images, the overall color of an image has to be quantized. Spatially, quantizing the color of an image to extract the prevalent color is the major objective of this paper. A combination of K-Mean and Expectation Minimization clustering algorithm called hidden-value learned K-mean clustering quantization algorithm is used to avoid the over clustering behavior of K-Mean algorithm. The experimental result shows the marginal differences between these algorithms.

  2. "Color Revolutions" and Beyond

    Institute of Scientific and Technical Information of China (English)

    Ji Zhiye; Xu Tao; Jiang Li; Da Wei; Chen Xiangyang; Ding Xiaoxing

    2005-01-01

    @@ Astring of media-coined "color revolutions" broke out in Georgia, Ukraine and Kirgyzstan one after another inside the Commonwealth of Independent States since October 2003,reminiscent of the drama of collapse of the former Soviet bloc at the turn of the 1990s. Why those upheavals came hot on the heels of the Soviet disintegration merely a dozen or so years ago? Are we expecting more Domino effects down the road? What geographical repercussions will they spark? We have invited some experts over from the China Institutes of Contemporary International Relations to air their views on these interesting issues.

  3. 'Snow White' in Color

    Science.gov (United States)

    2008-01-01

    This color image taken by the Surface Stereo Imager on NASA's Phoenix Mars Lander shows the trench dubbed 'Snow White,' after further digging on the 25th Martian day, or sol, of the mission (June 19, 2008). The lander's solar panel is casting a shadow over a portion of the trench. The trench is about 5 centimeters (2 inches) deep and 30 centimeters (12 inches) long. The Phoenix Mission is led by the University of Arizona, Tucson, on behalf of NASA. Project management of the mission is by NASA's Jet Propulsion Laboratory, Pasadena, Calif. Spacecraft development is by Lockheed Martin Space Systems, Denver.

  4. Coloring GPenSIM

    OpenAIRE

    2008-01-01

    The object of this report is to present a solution on how to implement color functionality in GPenSIM. Current version of GPenSIM is based on Place/Transition nets (PT-nets). When creating systems with PT-nets there are some issues when modeling large real life systems. First of all PT-nets have no data concepts. This results in extremely large nets, because the data manipulation has to be represented in the net as places and transitions. The other issue concerns the hierarc...

  5. EPSON STYLUS COLOR 580

    Institute of Scientific and Technical Information of China (English)

    侯亮

    2001-01-01

    @@ STYLUS COLOR 580打印机机身乳白色,造型小巧而活泼.上盖采用白色半透明塑料制成,和白色机身相映成趣,摆放在家中,和家里温馨的情调非常和谐.打印机全身除了一个电源接口和一个USB接口之外,没有其他任何形式的按钮或指示灯.

  6. Color Changing Hydrogen Sensors

    Science.gov (United States)

    Roberson, Luke B.; Williams, Martha; Captain, Janine E.; Mohajeri, Nahid; Raissi, Ali

    2015-01-01

    During the Space Shuttle Program, one of the most hazardous operation that occurred was the loading of liquid hydrogen (LH2) during fueling operations of the spacecraft. Due to hydrogen's low explosive limit, any amount leaked could lead to catastrophic event. Hydrogen's chemical properties make it ideal as a rocket fuel; however, the fuel is deemed unsafe for most commercial use because of the inability to easily detect the gas leaking. The increased use of hydrogen over traditional fossil fuels would reduce greenhouse gases and America's dependency on foreign oil. Therefore a technology that would improve safety at NASA and in the commercial sector while creating a new economic sector would have a huge impact to NASA's mission. The Chemochromic Detector for sensing hydrogen gas leakage is a color-changing detector that is useful in any application where it is important to know not only the presence but also the location of the hydrogen gas leak. This technology utilizes a chemochromicpigment and polymer matrix that can be molded or spun into rigid or pliable shapes useable in variable temperature environments including atmospheres of inert gas, hydrogen gas, or mixtures of gases. A change in color of the detector material indicates where gaseous hydrogen leaks are occurring. The irreversible sensor has a dramatic color change from beige to dark grey and remains dark grey after exposure. A reversible pigment changes from white to blue in the presence of hydrogen and reverts back to white in the presence of oxygen. Both versions of the sensor's pigments were comprised of a mixture of a metal oxide substrate and a hydro-chromic compound (i.e., the compound that changed color in the presence of hydrogen) and immediately notified the operator of the presence of low levels of hydrogen. The detector can be used in a variety of formats including paint, tape, caulking, injection molded parts, textiles and fabrics, composites, and films. This technology brings numerous

  7. Cliques, coloring, and satisfiability

    CERN Document Server

    Johnson, David S

    1996-01-01

    The purpose of a DIMACS Challenge is to encourage and coordinate research in the experimental analysis of algorithms. The First DIMACS Challenge encouraged experimental work in the area of network flow and matchings. The Second DIMACS Challenge, on which this volume is based, took place in conjunction with the DIMACS Special Year on Combinatorial Optimization. Addressed here are three difficult combinatorial optimization problems: finding cliques in a graph, coloring the vertices of a graph, and solving instances of the satisfiability problem. These problems were chosen both for their practical interest and because of their theoretical intractability.

  8. The color of night: surface color categorization by color defective observers under dim illuminations.

    Science.gov (United States)

    Pokorny, Joel; Lutze, Margaret; Cao, Dingcai; Zele, Andrew J

    2008-01-01

    People with normal trichromatic color vision experience variegated hue percepts under dim illuminations where only rod photoreceptors mediate vision. Here, hue perceptions were determined for persons with congenital color vision deficiencies over a wide range of light levels, including very low light levels where rods alone mediate vision. Deuteranomalous trichromats, deuteranopes and protanopes served as observers. The appearances of 24 paper color samples from the OSA Uniform Color Scales were gauged under successively dimmer illuminations from 10 to 0.0003 Lux (1.0 to -3.5 log Lux). Triads of samples were chosen representing each of eight basic color categories; "red," "pink," "orange," "yellow," "green," "blue," "purple," and "gray." Samples within each triad varied in lightness. Observers sorted samples into groups that they could categorize with specific color names. Above -0.5 log Lux, the dichromatic and anomalous trichromatic observers sorted the samples into the original representative color groups, with some exceptions. At light levels where rods alone mediate vision, the color names assigned by the deuteranomalous trichromats were similar to the color names used by color normals; higher scotopic reflectance samples were classified as blue-green-grey and lower reflectance samples as red-orange. Color names reported by the dichromats at the dimmest light levels had extensive overlap in their sample scotopic lightness distributions. Dichromats did not assign scotopic color names based on the sample scotopic lightness, as did deuteranomalous trichromats and colour-normals. We reasoned that the reduction in color gamut that a dichromat experiences at photopic light levels leads to a limited association of rod color perception with objects differing in scotopic reflectance.

  9. Color measurement of methylene blue dye/clay mixtures and its application using economical methods

    Science.gov (United States)

    Milosevic, Maja; Kaludjerovic, Lazar; Logar, Mihovil

    2016-04-01

    Identifying the clay mineral components of clay materials by staining tests is rapid and simple, but their applicability is restricted because of the mutual interference of the common components of clay materials and difficulties in color determination. The change of color with concentration of the dye is related to the use of colorants as a field test for identifying clay minerals and has been improved over the years to assure the accuracy of the tests (Faust G. T., 1940). The problem of measurement and standardization of color may be solved by combination of colors observed in staining tests with prepared charts of color chips available in the Munsell Book of Color, published by Munsell Color Co. Under a particular set of illumination conditions, a human eye can achieve an approximate match between the color of the dyed clay sample and that of a standard color chip, even though they do have different spectral reflectance characteristics. Experiments were carried out with diffuse reflectance spectroscopy on selected clay samples (three montmorillonite, three kaolinite and one mix-layer clay samples) saturated with different concentration of methylene blue dye solution. Dominant wavelength and purity of the color was obtained on oriented dry samples and calculated by use of the I. C. I. (x, y) - diagram in the region of 400-700 nm (reflectance spectra) without MB and after saturation with different concentrations of MB solutions. Samples were carefully photographed in the natural light environment and processed with user friendly and easily accessible applications (Adobe color CC and ColorHexa encyclopedia) available for android phones or tablets. Obtained colors were compared with Munsell standard color chips, RGB and Hexa color standards. Changes in the color of clay samples in their interaction with different concentration of the applied dye together with application of economical methods can still be used as a rapid fieldwork test. Different types of clay

  10. The color of night: Surface color perception under dim illuminations.

    Science.gov (United States)

    Pokorny, Joel; Lutze, Margaret; Cao, Dingcai; Zele, Andrew J

    2006-01-01

    Several studies document rudimentary color vision under dim illumination. Here, hue perceptions of paper color samples were determined for a wide range of light levels, including very low light levels where rods alone mediate vision. The appearances of 24 paper color samples from the OSA Uniform Color Scales were gauged under successively dimmer illuminations from 10-0.0003 Lux. Triads of samples were chosen representing each of eight basic color categories; red, pink, orange, yellow, green, blue, purple, and gray. Samples within each triad varied in lightness. Observers sorted samples into groups that they could categorize with specific color names. Above 0.32 Lux, observers sorted the samples into the originally chosen color groups with few exceptions. For 0.1-0.01 Lux, the red and orange samples were usually correctly identified as either red or orange. The remaining samples tended to be grouped into two categories, associated with the scotopic sample reflectance. The lowest reflectance samples were below threshold and were named black. The higher reflectance group was named predominately as green or blue-green (three observers; the fourth observer used blue or achromatic). At the three dimmest levels (< or = 0.0032 Lux) there continued to be conspicuous color percepts. Color categories were reliably assigned based on relative sample scotopic lightness. Of the samples above threshold, those with lower reflectance were classified as red or orange (all observers) and the higher reflectance samples as green or blue-green (three observers) or achromatic or blue (the fourth observer). Rods and L-cones presumably mediated color percepts at the intermediate light levels used in the study. At the three lowest light levels there were distinct color appearances mediated exclusively by rods. We speculate that at these light levels the visual system estimates probable colors based on prior natural experience.

  11. Cryptic Caribbean species of Scorpaena (Actinopterygii: Scorpaeniformes) suggested by cytogenetic and molecular data.

    Science.gov (United States)

    Nirchio, M; Oliveira, C; Siccha-Ramirez, Z R; Sene, V F; Sánchez-Romero, O R; Ehemann, N R; Milana, V; Rossi, A R; Sola, L

    2016-10-01

    Cytogenetic and molecular analyses enabled identification of two cytotypes among individuals of the spotted scorpion fish Scorpaena plumieri from Margarita Island, Venezuela. Cytotype 1 was characterized by 48 subtelo-acrocentric chromosomes and fundamental number (number of chromosome arms; FN) equalled 48, while cytotype 2 was characterized by two metacentric and 46 subtelo-acrocentric chromosomes and FN was 50. These cytotypes also differed in the location of the ribosomal gene clusters and in the distribution of the constitutive heterochromatin. Moreover, fish from the cytotypes 1 and 2 were found to belong to distinct mitochondrial lineages. The presence of two S. plumieri cytotypes from two lineages separated by high genetic distance suggests that they correspond to sympatric cryptic species.

  12. A new cryptically dioecious species of bush tomato (Solanum from the Northern Territory, Australia

    Directory of Open Access Journals (Sweden)

    Christopher Martine

    2013-11-01

    Full Text Available A new species of dioecious Solanum from the Australian “Dioicum Complex” of Solanum subgenus Leptostemonum is described. Solanum cowiei Martine sp. nov., is allied with other members of this problematic lineage, but differs in its slender leaves, limited armature and diminutive habit. The species was first segregated by botanists at the Northern Territory Herbarium as Solanum sp. Litchfield (I.D. Cowie 1428; and specimens representing this species have also been referred to by Symon as Solanum sp. Fitzmaurice River. Collections suggest that this is an endemic of the sub-arid tropical zone of the Northern Territory. SEM images support initial assumptions that the new species is cryptically dioecious via production of inaperturate pollen grains in morphologically hermaphrodite flowers.

  13. A new cryptically dioecious species of bush tomato (Solanum) from the Northern Territory, Australia.

    Science.gov (United States)

    Martine, Christopher T; Symon, David E; Evans, Elizabeth C

    2013-01-01

    A new species of dioecious Solanum from the Australian "Dioicum Complex" of Solanum subgenus Leptostemonum is described. Solanum cowiei Martine sp. nov., is allied with other members of this problematic lineage, but differs in its slender leaves, limited armature and diminutive habit. The species was first segregated by botanists at the Northern Territory Herbarium as Solanum sp. Litchfield (I.D. Cowie 1428); and specimens representing this species have also been referred to by Symon as Solanum sp. Fitzmaurice River. Collections suggest that this is an endemic of the sub-arid tropical zone of the Northern Territory. SEM images support initial assumptions that the new species is cryptically dioecious via production of inaperturate pollen grains in morphologically hermaphrodite flowers.

  14. Cryptic female choice via sperm dumping favours male copulatory courtship in a spider.

    Science.gov (United States)

    Peretti, A V; Eberhard, W G

    2010-02-01

    Males of many animals perform 'copulatory courtship' during copulation, but the possible reproductive significance of this behaviour has seldom been investigated. In some animals, including the spider Physocyclus globosus (Pholcidae), the female discards sperm during or immediately following some copulations. In this study, we determined which of several variables associated with copulation correlated with paternity success in P. globosus when two males mate with a single female. Then, by determining which of these variables also correlated with sperm dumping, we inferred which variables may affect paternity via the mechanism of sperm dumping. Male abdomen vibration (a copulatory courtship behaviour) and male genitalic squeezing both correlated with both paternity and sperm dumping; so, these traits may be favoured by biased sperm dumping. Biased sperm dumping may also be the mechanism by which possible cryptic female choice favours another male trait that was the subject of a previous study, responsiveness to female stridulation.

  15. Down syndrome consequent to a cryptic maternal 12p;21q chromosome translocation

    Energy Technology Data Exchange (ETDEWEB)

    Scott, J.A.; Wenger, S.L.; Chakravarti, A. [Univ. of Pittsburgh, PA (United States)] [and others

    1995-03-13

    A 9-year-old, mildly mentally retarded girl presented with phenotypic manifestations of Down syndrome. G-banded chromosomal analyses of peripheral blood lymphocytes from the patient and her parents, and skin fibroblasts from the patient, did not detect any abnormality. Molecular analysis of 15 highly polymorphic chromosome 21 dinucleotide repeat markers demonstrated a partial duplication of the Down syndrome critical region (D21S55, subband 21q22.2) of maternal origin in the patient. The segmental trisomy was confirmed by FISH analysis using the cosmid probe D21S55. Further analysis demonstrated that the trisomy was due to segregation of an apparently balanced cryptic translocation from the mother. The patient`s karyotype is 46,XX,-12,tder(12)t(12;21)(p13.1;q22.2)mat. 21 refs., 3 figs., 1 tab.

  16. Genomes of cryptic chimpanzee Plasmodium species reveal key evolutionary events leading to human malaria.

    Science.gov (United States)

    Sundararaman, Sesh A; Plenderleith, Lindsey J; Liu, Weimin; Loy, Dorothy E; Learn, Gerald H; Li, Yingying; Shaw, Katharina S; Ayouba, Ahidjo; Peeters, Martine; Speede, Sheri; Shaw, George M; Bushman, Frederic D; Brisson, Dustin; Rayner, Julian C; Sharp, Paul M; Hahn, Beatrice H

    2016-03-22

    African apes harbour at least six Plasmodium species of the subgenus Laverania, one of which gave rise to human Plasmodium falciparum. Here we use a selective amplification strategy to sequence the genome of chimpanzee parasites classified as Plasmodium reichenowi and Plasmodium gaboni based on the subgenomic fragments. Genome-wide analyses show that these parasites indeed represent distinct species, with no evidence of cross-species mating. Both P. reichenowi and P. gaboni are 10-fold more diverse than P. falciparum, indicating a very recent origin of the human parasite. We also find a remarkable Laverania-specific expansion of a multigene family involved in erythrocyte remodelling, and show that a short region on chromosome 4, which encodes two essential invasion genes, was horizontally transferred into a recent P. falciparum ancestor. Our results validate the selective amplification strategy for characterizing cryptic pathogen species, and reveal evolutionary events that likely predisposed the precursor of P. falciparum to colonize humans.

  17. Epidermolytic palmoplantar keratoderma caused by activation of a cryptic splice site in KRT9.

    Science.gov (United States)

    Fuchs-Telem, D; Padalon-Brauch, G; Sarig, O; Sprecher, E

    2013-03-01

    Epidermolytic palmoplantar keratoderma (EPPK) is caused by mutations in KRT9 and less often, KRT1. All known mutations in KRT9 have been found in regions of the gene encoding the conserved central α-helix rod domain. In the present study, we investigated the molecular basis of EPPK in a patient of Ashkenazi Jewish origin. The patient was found to carry a novel missense mutation in KRT9, resulting in the substitution of a poorly conserved leucine for valine at position 11 of the amino acid sequence. Despite its unusual location, the mutation was shown to be pathogenic through activation of a cryptic donor splice site, resulting in the deletion of 162 amino acids. The present data indicate the need to screen keratin genes in their entirety, as mutations altering domains of lesser functional importance may exert their deleterious effect at the transcriptional level.

  18. Cryptic PML-RARα positive acute promyelocytic leukemia with unusual morphology and cytogenetics

    Directory of Open Access Journals (Sweden)

    Goyal Manu

    2010-10-01

    Full Text Available Acute Promyelocytic Leukemia (APL is different from other forms of acute myeloid leukemia (AML, to the reason being the potential devastating coagulopathy and the sensitivity to all-trans retinoic acid (ATRA and arsenic trioxide (As 2 O 3 . We hereby present a case of APL, morphologically distinct from the hypergranular APL; however, the flow cytometry revealed a characteristic phenotype showing dim CD45, bright CD13, bright CD33 and dim CD117 positivity. These were negative for CD34, HLA-DR, B-lymphoid and T-lymphoid lineage markers. Conventional cytogenetics revealed a distinct karyotype of a male with translocation t(4;15(q34.2:q26.3. However, interphase florescence-in-situ hybridization (FISH revealed PML/RARA fusion signal on chromosome 15 in 90% cells. The cryptic translocations may be missed on conventional cytogenetics, however, need to be picked by other techniques as FISH.

  19. Molecular approaches to identify cryptic species and polymorphic species within a complex community of fig wasps.

    Directory of Open Access Journals (Sweden)

    Jin-Hua Xiao

    Full Text Available Cryptic and polymorphic species can complicate traditional taxonomic research and both of these concerns are common in fig wasp communities. Species identification is very difficult, despite great effort and the ecological importance of fig wasps. Herein, we try to identify all chalcidoid wasp species hosted by one species of fig, using both morphological and molecular methods. We compare the efficiency of four different DNA regions and find that ITS2 is highly effective for species identification, while mitochondrial COI and Cytb regions appear less reliable, possibly due to the interference signals from either nuclear copies of mtDNA, i.e. NUMTs, or the effects of Wolbachia infections. The analyses suggest that combining multiple markers is the best choice for inferring species identifications as any one marker may be unsuitable in a given case.

  20. Characterization of cryptic rearrangements, deletion, complex variants of PML, RARA in acute promyelocytic leukemia

    Directory of Open Access Journals (Sweden)

    Pratibha Kadam Amare

    2011-01-01

    Full Text Available Acute promyelocytic leukemia (APL is characterized by a reciprocal translocation t(15;17(q22;q21 leading to the disruption of Promyelocytic leukemia (PML and Retionic Acid Receptor Alpha (RARA followed by reciprocal PML-RARA fusion in 90% of the cases. Fluorescence in situ hybridization (FISH has overcome the hurdles of unavailability of abnormal and/or lack of metaphase cells, and detection of cryptic, submicroscopic rearrangements. In the present study, besides diagnostic approach we sought to analyze these cases for identification and characterization of cryptic rearrangements, deletion variants and unknown RARA translocation variants by application of D-FISH and RARA break-apart probe strategy on interphase and metaphase cells in a large series of 200 cases of APL. Forty cases (20% had atypical PML-RARA and/or RARA variants. D-FISH with PML/RARA probe helped identification of RARA insertion to PML. By application of D-FISH on metaphase cells, we documented that translocation of 15 to 17 leads to 17q deletion which results in loss of reciprocal fusion and/or residual RARA on der(17. Among the complex variants of t(15;17, PML-RARA fusion followed by residual RARA insertion closed to PML-RARA on der(15 was unique and unusual. FISH with break-apart RARA probe on metaphase cells was found to be a very efficient strategy to detect unknown RARA variant translocations like t(11;17(q23;q21, t(11;17(q13;q21 and t(2;17(p21;q21. These findings proved that D-FISH and break-apart probe strategy has potential to detect primary as well as secondary additional aberrations of PML, RARA and other additional loci. The long-term clinical follow-up is essential to evaluate the clinical importance of these findings.