Community petascale project for accelerator science and simulation: Advancing computational science for future accelerators and accelerator technologies

International Nuclear Information System (INIS)

Spentzouris, P.; Cary, J.; McInnes, L.C.; Mori, W.; Ng, C.; Ng, E.; Ryne, R.

2008-01-01

The design and performance optimization of particle accelerators are essential for the success of the DOE scientific program in the next decade. Particle accelerators are very complex systems whose accurate description involves a large number of degrees of freedom and requires the inclusion of many physics processes. Building on the success of the SciDAC-1 Accelerator Science and Technology project, the SciDAC-2 Community Petascale Project for Accelerator Science and Simulation (ComPASS) is developing a comprehensive set of interoperable components for beam dynamics, electromagnetics, electron cooling, and laser/plasma acceleration modelling. ComPASS is providing accelerator scientists the tools required to enable the necessary accelerator simulation paradigm shift from high-fidelity single physics process modeling (covered under SciDAC1) to high-fidelity multiphysics modeling. Our computational frameworks have been used to model the behavior of a large number of accelerators and accelerator R and D experiments, assisting both their design and performance optimization. As parallel computational applications, the ComPASS codes have been shown to make effective use of thousands of processors.

Classical-trajectory simulation of accelerating neutral atoms with polarized intense laser pulses

Science.gov (United States)

Xia, Q. Z.; Fu, L. B.; Liu, J.

2013-03-01

In the present paper, we perform the classical trajectory Monte Carlo simulation of the complex dynamics of accelerating neutral atoms with linearly or circularly polarized intense laser pulses. Our simulations involve the ion motion as well as the tunneling ionization and the scattering dynamics of valence electron in the combined Coulomb and electromagnetic fields, for both helium (He) and magnesium (Mg). We show that for He atoms, only linearly polarized lasers can effectively accelerate the atoms, while for Mg atoms, we find that both linearly and circularly polarized lasers can successively accelerate the atoms. The underlying mechanism is discussed and the subcycle dynamics of accelerating trajectories is investigated. We have compared our theoretical results with a recent experiment [Eichmann Nature (London)NATUAS0028-083610.1038/nature08481 461, 1261 (2009)].

Kinematics and dynamics analysis of a novel serial-parallel dynamic simulator

Energy Technology Data Exchange (ETDEWEB)

Hu, Bo; Zhang, Lian Dong; Yu, Jingjing [Parallel Robot and Mechatronic System Laboratory of Hebei Province, Yanshan University, Qinhuangdao, Hebei (China)

2016-11-15

A serial-parallel dynamics simulator based on serial-parallel manipulator is proposed. According to the dynamics simulator motion requirement, the proposed serial-parallel dynamics simulator formed by 3-RRS (active revolute joint-revolute joint-spherical joint) and 3-SPR (Spherical joint-active prismatic joint-revolute joint) PMs adopts the outer and inner layout. By integrating the kinematics, constraint and coupling information of the 3-RRS and 3-SPR PMs into the serial-parallel manipulator, the inverse Jacobian matrix, velocity, and acceleration of the serial-parallel dynamics simulator are studied. Based on the principle of virtual work and the kinematics model, the inverse dynamic model is established. Finally, the workspace of the (3-RRS)+(3-SPR) dynamics simulator is constructed.

Kinematics and dynamics analysis of a novel serial-parallel dynamic simulator

International Nuclear Information System (INIS)

Hu, Bo; Zhang, Lian Dong; Yu, Jingjing

2016-01-01

A serial-parallel dynamics simulator based on serial-parallel manipulator is proposed. According to the dynamics simulator motion requirement, the proposed serial-parallel dynamics simulator formed by 3-RRS (active revolute joint-revolute joint-spherical joint) and 3-SPR (Spherical joint-active prismatic joint-revolute joint) PMs adopts the outer and inner layout. By integrating the kinematics, constraint and coupling information of the 3-RRS and 3-SPR PMs into the serial-parallel manipulator, the inverse Jacobian matrix, velocity, and acceleration of the serial-parallel dynamics simulator are studied. Based on the principle of virtual work and the kinematics model, the inverse dynamic model is established. Finally, the workspace of the (3-RRS)+(3-SPR) dynamics simulator is constructed

Ras conformational switching: simulating nucleotide-dependent conformational transitions with accelerated molecular dynamics.

Directory of Open Access Journals (Sweden)

Barry J Grant

2009-03-01

Full Text Available Ras mediates signaling pathways controlling cell proliferation and development by cycling between GTP- and GDP-bound active and inactive conformational states. Understanding the complete reaction path of this conformational change and its intermediary structures is critical to understanding Ras signaling. We characterize nucleotide-dependent conformational transition using multiple-barrier-crossing accelerated molecular dynamics (aMD simulations. These transitions, achieved for the first time for wild-type Ras, are impossible to observe with classical molecular dynamics (cMD simulations due to the large energetic barrier between end states. Mapping the reaction path onto a conformer plot describing the distribution of the crystallographic structures enabled identification of highly populated intermediate structures. These structures have unique switch orientations (residues 25-40 and 57-75 intermediate between GTP and GDP states, or distinct loop3 (46-49, loop7 (105-110, and alpha5 C-terminus (159-166 conformations distal from the nucleotide-binding site. In addition, these barrier-crossing trajectories predict novel nucleotide-dependent correlated motions, including correlations of alpha2 (residues 66-74 with alpha3-loop7 (93-110, loop2 (26-37 with loop10 (145-151, and loop3 (46-49 with alpha5 (152-167. The interconversion between newly identified Ras conformations revealed by this study advances our mechanistic understanding of Ras function. In addition, the pattern of correlated motions provides new evidence for a dynamic linkage between the nucleotide-binding site and the membrane interacting C-terminus critical for the signaling function of Ras. Furthermore, normal mode analysis indicates that the dominant collective motion that occurs during nucleotide-dependent conformational exchange, and captured in aMD (but absent in cMD simulations, is a low-frequency motion intrinsic to the structure.

Accelerating Climate Simulations Through Hybrid Computing

Science.gov (United States)

Zhou, Shujia; Sinno, Scott; Cruz, Carlos; Purcell, Mark

2009-01-01

Unconventional multi-core processors (e.g., IBM Cell B/E and NYIDIDA GPU) have emerged as accelerators in climate simulation. However, climate models typically run on parallel computers with conventional processors (e.g., Intel and AMD) using MPI. Connecting accelerators to this architecture efficiently and easily becomes a critical issue. When using MPI for connection, we identified two challenges: (1) identical MPI implementation is required in both systems, and; (2) existing MPI code must be modified to accommodate the accelerators. In response, we have extended and deployed IBM Dynamic Application Virtualization (DAV) in a hybrid computing prototype system (one blade with two Intel quad-core processors, two IBM QS22 Cell blades, connected with Infiniband), allowing for seamlessly offloading compute-intensive functions to remote, heterogeneous accelerators in a scalable, load-balanced manner. Currently, a climate solar radiation model running with multiple MPI processes has been offloaded to multiple Cell blades with approx.10% network overhead.

Introduction to Molecular Dynamics and Accelerated Molecular Dynamics

International Nuclear Information System (INIS)

Perez, Danny

2012-01-01

We first introduce classical molecular dynamics (MD) simulations. We discuss their main constituents - the interatomic potentials, the boundary conditions, and the integrators - and the discuss the various ensembles that can be sampled. We discuss the strengths and weaknesses of MD, specifically in terms of time and length-scales. We then move on to discuss accelerated MD (AMD) methods, techniques that were designed to circumvent the timescale limitations of MD for rare event systems. The different methods are introduced and examples of use given.

Beam Dynamics Simulation for the CTF3 Drive Beam Accelerator

CERN Document Server

Schulte, Daniel

2000-01-01

A new CLIC Test Facility (CTF3) at CERN will serve to study the drive beam generation for the Compact Linear Collider (CLIC). CTF3 has to accelerate a 3.5 A electron beam in almost fully-loaded structures. The pulse contains more than 2000 bunches, one in every second RF bucket, and has a length of more than one microsecond. Different options for the lattice of the drive-beam accelerator are presented, based on FODO-cells and triplets as well as solenoids. The transverse stability is simulated, including the effects of beam jitter, alignment and beam-based correction.

Nonlinear dynamics in particle accelerators

CERN Document Server

Dilão, Rui

1996-01-01

This book is an introductory course to accelerator physics at the level of graduate students. It has been written for a large audience which includes users of accelerator facilities, accelerator physicists and engineers, and undergraduates aiming to learn the basic principles of construction, operation and applications of accelerators.The new concepts of dynamical systems developed in the last twenty years give the theoretical setting to analyse the stability of particle beams in accelerator. In this book a common language to both accelerator physics and dynamical systems is integrated and dev

Nonlinear dynamics of autonomous vehicles with limits on acceleration

Science.gov (United States)

Davis, L. C.

2014-07-01

The stability of autonomous vehicle platoons with limits on acceleration and deceleration is determined. If the leading-vehicle acceleration remains within the limits, all vehicles in the platoon remain within the limits when the relative-velocity feedback coefficient is equal to the headway time constant [k=1/h]. Furthermore, if the sensitivity α>1/h, no collisions occur. String stability for small perturbations is assumed and the initial condition is taken as the equilibrium state. Other values of k and α that give stability with no collisions are found from simulations. For vehicles with non-negligible mechanical response, simulations indicate that the acceleration-feedback-control gain might have to be dynamically adjusted to obtain optimal performance as the response time changes with engine speed. Stability is demonstrated for some perturbations that cause initial acceleration or deceleration greater than the limits, yet do not cause collisions.

Further development of the V-code for recirculating linear accelerator simulations

Energy Technology Data Exchange (ETDEWEB)

Franke, Sylvain; Ackermann, Wolfgang; Weiland, Thomas [Institut fuer Theorie Elektromagnetischer Felder, Technische Universitaet Darmstadt (Germany); Eichhorn, Ralf; Hug, Florian; Kleinmann, Michaela; Platz, Markus [Institut fuer Kernphysik, Technische Universitaet Darmstadt (Germany)

2011-07-01

The Superconducting Darmstaedter LINear Accelerator (S-DALINAC) installed at the institute of nuclear physics (IKP) at TU Darmstadt is designed as a recirculating linear accelerator. The beam is first accelerated up to 10 MeV in the injector beam line. Then it is deflected by 180 degrees into the main linac. The linac section with eight superconducting cavities is passed up to three times, providing a maximal energy gain of 40 MeV on each passage. Due to this recirculating layout it is complicated to find an accurate setup for the various beam line elements. Fast online beam dynamics simulations can advantageously assist the operators because they provide a more detailed insight into the actual machine status. In this contribution further developments of the moment based simulation tool V-code which enables to simulate recirculating machines are presented together with simulation results.

Radio Frequency Station - Beam Dynamics Interaction in Circular Accelerators

Energy Technology Data Exchange (ETDEWEB)

Mastoridis, Themistoklis [Stanford Univ., CA (United States)

2010-08-01

The longitudinal beam dynamics in circular accelerators is mainly defined by the interaction of the beam current with the accelerating Radio Frequency (RF) stations. For stable operation, Low Level RF (LLRF) feedback systems are employed to reduce coherent instabilities and regulate the accelerating voltage. The LLRF system design has implications for the dynamics and stability of the closed-loop RF systems as well as for the particle beam, and is very sensitive to the operating range of accelerator currents and energies. Stability of the RF loop and the beam are necessary conditions for reliable machine operation. This dissertation describes theoretical formalisms and models that determine the longitudinal beam dynamics based on the LLRF implementation, time domain simulations that capture the dynamic behavior of the RF station-beam interaction, and measurements from the Positron-Electron Project (PEP-II) and the Large Hadron Collider (LHC) that validate the models and simulations. These models and simulations are structured to capture the technical characteristics of the system (noise contributions, non-linear elements, and more). As such, they provide useful results and insight for the development and design of future LLRF feedback systems. They also provide the opportunity to study diverse longitudinal beam dynamics effects such as coupled-bunch impedance driven instabilities and single bunch longitudinal emittance growth. Coupled-bunch instabilities and RF station power were the performance limiting effects for PEP-II. The sensitivity of the instabilities to individual LLRF parameters, the effectiveness of alternative operational algorithms, and the possible tradeoffs between RF loop and beam stability were studied. New algorithms were implemented, with significant performance improvement leading to a world record current during the last PEP-II run of 3212 mA for the Low Energy Ring. Longitudinal beam emittance growth due to RF noise is a major concern for LHC

COMPASS, the COMmunity Petascale project for Accelerator Science and Simulation, a board computational accelerator physics initiative

International Nuclear Information System (INIS)

Cary, J.R.; Spentzouris, P.; Amundson, J.; McInnes, L.; Borland, M.; Mustapha, B.; Ostroumov, P.; Wang, Y.; Fischer, W.; Fedotov, A.; Ben-Zvi, I.; Ryne, R.; Esarey, E.; Geddes, C.; Qiang, J.; Ng, E.; Li, S.; Ng, C.; Lee, R.; Merminga, L.; Wang, H.; Bruhwiler, D.L.; Dechow, D.; Mullowney, P.; Messmer, P.; Nieter, C.; Ovtchinnikov, S.; Paul, K.; Stoltz, P.; Wade-Stein, D.; Mori, W.B.; Decyk, V.; Huang, C.K.; Lu, W.; Tzoufras, M.; Tsung, F.; Zhou, M.; Werner, G.R.; Antonsen, T.; Katsouleas, T.; Morris, B.

2007-01-01

Accelerators are the largest and most costly scientific instruments of the Department of Energy, with uses across a broad range of science, including colliders for particle physics and nuclear science and light sources and neutron sources for materials studies. COMPASS, the Community Petascale Project for Accelerator Science and Simulation, is a broad, four-office (HEP, NP, BES, ASCR) effort to develop computational tools for the prediction and performance enhancement of accelerators. The tools being developed can be used to predict the dynamics of beams in the presence of optical elements and space charge forces, the calculation of electromagnetic modes and wake fields of cavities, the cooling induced by comoving beams, and the acceleration of beams by intense fields in plasmas generated by beams or lasers. In SciDAC-1, the computational tools had multiple successes in predicting the dynamics of beams and beam generation. In SciDAC-2 these tools will be petascale enabled to allow the inclusion of an unprecedented level of physics for detailed prediction

Simulation of dynamic traffic loading based on accelerated pavement testing (APT)

CSIR Research Space (South Africa)

Steyn, WJvdM

2004-03-01

Full Text Available The objective of this paper is to introduce the latest Heavy Vehicle Simulator (HVS) technology as part of the South African Accelerated Pavement Testing (APT) efforts, its capabilities and expected impact on road pavement analysis....

Cluster analysis of accelerated molecular dynamics simulations: A case study of the decahedron to icosahedron transition in Pt nanoparticles

Science.gov (United States)

Huang, Rao; Lo, Li-Ta; Wen, Yuhua; Voter, Arthur F.; Perez, Danny

2017-10-01

Modern molecular-dynamics-based techniques are extremely powerful to investigate the dynamical evolution of materials. With the increase in sophistication of the simulation techniques and the ubiquity of massively parallel computing platforms, atomistic simulations now generate very large amounts of data, which have to be carefully analyzed in order to reveal key features of the underlying trajectories, including the nature and characteristics of the relevant reaction pathways. We show that clustering algorithms, such as the Perron Cluster Cluster Analysis, can provide reduced representations that greatly facilitate the interpretation of complex trajectories. To illustrate this point, clustering tools are used to identify the key kinetic steps in complex accelerated molecular dynamics trajectories exhibiting shape fluctuations in Pt nanoclusters. This analysis provides an easily interpretable coarse representation of the reaction pathways in terms of a handful of clusters, in contrast to the raw trajectory that contains thousands of unique states and tens of thousands of transitions.

The use of BMAD in simulating transverse and longitudinal dynamics in RHIC

Energy Technology Data Exchange (ETDEWEB)

Lovelace, III, Henry H. [Brookhaven National Lab. (BNL), Upton, NY (United States)

2017-08-28

In accelerator physics, models of a given machine are used to predict the behaviors of the beam, magnets, and radiofrequency cavities. The use of the computational model has become wide spread to ease the development period of the accelerator lattice. There are various programs that are used to create lattices and run simulations of both transverse and longitudinal beam dynamics. The programs include Methodical Accelerator Design(MAD) MAD8, MADX, Zgoubi, Polymorphic Tracking Code (PTC), and many others. In this discussion the BMAD (Baby Methodical Accelerator Design) is presented as an additional tool in creating and simulating accelerator lattices for the study of beam dynamics in the Relativistic Heavy Ion Collider (RHIC).

Hardware Accelerated Simulated Radiography

International Nuclear Information System (INIS)

Laney, D; Callahan, S; Max, N; Silva, C; Langer, S; Frank, R

2005-01-01

We present the application of hardware accelerated volume rendering algorithms to the simulation of radiographs as an aid to scientists designing experiments, validating simulation codes, and understanding experimental data. The techniques presented take advantage of 32 bit floating point texture capabilities to obtain validated solutions to the radiative transport equation for X-rays. An unsorted hexahedron projection algorithm is presented for curvilinear hexahedra that produces simulated radiographs in the absorption-only regime. A sorted tetrahedral projection algorithm is presented that simulates radiographs of emissive materials. We apply the tetrahedral projection algorithm to the simulation of experimental diagnostics for inertial confinement fusion experiments on a laser at the University of Rochester. We show that the hardware accelerated solution is faster than the current technique used by scientists

Beam and spin dynamics of hadron beams in intermediate-energy ring accelerators

International Nuclear Information System (INIS)

Lehrach, Andreas

2008-01-01

In this thesis beam and spin dynamics of ring accelerators are described. After a general theoretical treatment methods for the beam optimization and polarization conservation are discussed. Then experiments on spin manipulation at the COSY facility are considered. Finally the beam simulation and accelerator lay-out for the HESR with regards to the FAIR experiment are described. (HSI)

Hardware-Accelerated Simulated Radiography

International Nuclear Information System (INIS)

Laney, D; Callahan, S; Max, N; Silva, C; Langer, S.; Frank, R

2005-01-01

We present the application of hardware accelerated volume rendering algorithms to the simulation of radiographs as an aid to scientists designing experiments, validating simulation codes, and understanding experimental data. The techniques presented take advantage of 32-bit floating point texture capabilities to obtain solutions to the radiative transport equation for X-rays. The hardware accelerated solutions are accurate enough to enable scientists to explore the experimental design space with greater efficiency than the methods currently in use. An unsorted hexahedron projection algorithm is presented for curvilinear hexahedral meshes that produces simulated radiographs in the absorption-only regime. A sorted tetrahedral projection algorithm is presented that simulates radiographs of emissive materials. We apply the tetrahedral projection algorithm to the simulation of experimental diagnostics for inertial confinement fusion experiments on a laser at the University of Rochester

Simulations of multistage intense ion beam acceleration

International Nuclear Information System (INIS)

Slutz, S.A.; Poukey, J.W.

1992-01-01

An analytic theory for magnetically insulated, multistage acceleration of high intensity ion beams, where the diamagnetic effect due to electron flow is important, has been presented by Slutz and Desjarlais. The theory predicts the existence of two limiting voltages called V 1 (W) and V 2 (W), which are both functions of the injection energy qW of ions entering the accelerating gap. As the voltage approaches V 1 (W), unlimited beam-current density can penetrate the gap without the formation of a virtual anode because the dynamic gap goes to zero. Unlimited beam current density can penetrate an accelerating gap above V 2 (W), although a virtual anode is formed. It was found that the behavior of these limiting voltages is strongly dependent on the electron density profile. The authors have investigated the behavior of these limiting voltages numerically using the 2-D particle-in-cell (PIC) code MAGIC. Results of these simulations are consistent with the superinsulated analytic results. This is not surprising, since the ignored coordinate eliminates instabilities known to be important from studies of single stage magnetically insulated ion diodes. To investigate the effect of these instabilities the authors have simulated the problem with the 3-D PIC code QUICKSILVER, which indicates behavior that is consistent with the saturated model

Dynamic analysis of an accelerator-based subcritical radioactive waste burning system

International Nuclear Information System (INIS)

Woosley, M.L. Jr.; Rydin, R.A.

1997-01-01

There has been a recent revival of interest in accelerator-driven subcritical fluid-fueled systems for radioactive waste management. This motivates the need for dynamic analysis of the nuclear kinetics of such systems. A physical description of the Los Alamos Accelerator-Based Conversion (ABC) concept is provided. This system is used as the basis for the kinetic study in this research. The current approach to the dynamic simulation of an accelerator-driven subcritical fluid-fueled system includes four functional blocks: A discrete ordinates model is used to calculate the flux distribution for the source-driven system (DORT); A nodal convection model is used to calculate time-dependent isotope and temperature distributions which impact reactivity (ABCcore); A nodal importance weighting model is used to calculate the reactivity impact of temperature and isotope distributions and to feed this information back to the time-dependent nodal convection model (ABCvip); A transient driver simulates system transients and records simulation data (ABCtrans). Specific transients which have been analyzed with the current modeling system are discussed. These transients include loss-of-flow and loss-of-cooling accidents, xenon and samarium transients, and cold-plug and overfueling events. The results of various transients have uncovered unpredictable behavior, unresolved design issues, and the need for active control. 11 refs., 6 figs., 1 tab

Chaotic dynamics in accelerator physics

International Nuclear Information System (INIS)

Cary, J.R.

1992-01-01

Substantial progress was in several areas of accelerator dynamics. For developing understanding of longitudinal adiabatic dynamics, and for creating efficiency enhancements of recirculating free-electron lasers, was substantially completed. A computer code for analyzing the critical KAM tori that bound the dynamic aperture in circular machines was developed. Studies of modes that arise due to the interaction of coating beams with a narrow-spectrum impedance have begun. During this research educational and research ties with the accelerator community at large have been strengthened

Conformational changes in acetylcholine binding protein investigated by temperature accelerated molecular dynamics.

Directory of Open Access Journals (Sweden)

Zeynab Mohammad Hosseini Naveh

Full Text Available Despite the large number of studies available on nicotinic acetylcholine receptors, a complete account of the mechanistic aspects of their gating transition in response to ligand binding still remains elusive. As a first step toward dissecting the transition mechanism by accelerated sampling techniques, we study the ligand-induced conformational changes of the acetylcholine binding protein (AChBP, a widely accepted model for the full receptor extracellular domain. Using unbiased Molecular Dynamics (MD and Temperature Accelerated Molecular Dynamics (TAMD simulations we investigate the AChBP transition between the apo and the agonist-bound state. In long standard MD simulations, both conformations of the native protein are stable, while the agonist-bound structure evolves toward the apo one if the orientation of few key sidechains in the orthosteric cavity is modified. Conversely, TAMD simulations initiated from the native conformations are able to produce the spontaneous transition. With respect to the modified conformations, TAMD accelerates the transition by at least a factor 10. The analysis of some specific residue-residue interactions points out that the transition mechanism is based on the disruption/formation of few key hydrogen bonds. Finally, while early events of ligand dissociation are observed already in standard MD, TAMD accelerates the ligand detachment and, at the highest TAMD effective temperature, it is able to produce a complete dissociation path in one AChBP subunit.

Simulation studies of acceleration of heavy ions and their elemental compositions

International Nuclear Information System (INIS)

Toida, Mieko; Ohsawa, Yukiharu

1996-07-01

By using a one-dimensional, electromagnetic particle simulation code with full ion and electron dynamics, we have studied the acceleration of heavy ions by a nonlinear magnetosonic wave in a multi-ion-species plasma. First, we describe the mechanism of heavy ion acceleration by magnetosonic waves. We then investigate this by particle simulations. The simulation plasma contains four ion species: H, He, O, and Fe. The number density of He is taken to be 10% of that of H, and those of O and Fe are much lower. Simulations confirm that, as in a single-ion-species plasma, some of the hydrogens can be accelerated by the longitudinal electric field formed in the wave. Furthermore, they show that magnetosonic waves can accelerate all the particles of all the heavy species (He, O, and Fe) by a different mechanism, i.e., by the transverse electric field. The maximum speeds of the heavy species are about the same, of the order of the wave propagation speed. These are in good agreement with theoretical prediction. These results indicate that, if high-energy ions are produced in the solar corona through these mechanisms, the elemental compositions of these heavy ions can be similar to that of the background plasma, i.e., the corona

The PyZgoubi framework and the simulation of dynamic aperture in fixed-field alternating-gradient accelerators

International Nuclear Information System (INIS)

Tygier, S.; Appleby, R.B.; Garland, J.M.; Hock, K.; Owen, H.; Kelliher, D.J.; Sheehy, S.L.

2015-01-01

We present PyZgoubi, a framework that has been developed based on the tracking engine Zgoubi to model, optimise and visualise the dynamics in particle accelerators, especially fixed-field alternating-gradient (FFAG) accelerators. We show that PyZgoubi abstracts Zgoubi by wrapping it in an easy-to-use Python framework in order to allow simple construction, parameterisation, visualisation and optimisation of FFAG accelerator lattices. Its object oriented design gives it the flexibility and extensibility required for current novel FFAG design. We apply PyZgoubi to two example FFAGs; this includes determining the dynamic aperture of the PAMELA medical FFAG in the presence of magnet misalignments, and illustrating how PyZgoubi may be used to optimise FFAGs. We also discuss a robust definition of dynamic aperture in an FFAG and show its implementation in PyZgoubi

The PyZgoubi framework and the simulation of dynamic aperture in fixed-field alternating-gradient accelerators

Energy Technology Data Exchange (ETDEWEB)

Tygier, S., E-mail: sam.tygier@hep.manchester.ac.uk [Cockcroft Accelerator Group, The University of Manchester (United Kingdom); Appleby, R.B., E-mail: robert.appleby@manchester.ac.uk [Cockcroft Accelerator Group, The University of Manchester (United Kingdom); Garland, J.M. [Cockcroft Accelerator Group, The University of Manchester (United Kingdom); Hock, K. [University of Liverpool (United Kingdom); Owen, H. [Cockcroft Accelerator Group, The University of Manchester (United Kingdom); Kelliher, D.J.; Sheehy, S.L. [STFC Rutherford Appleton Laboratory (United Kingdom)

2015-03-01

We present PyZgoubi, a framework that has been developed based on the tracking engine Zgoubi to model, optimise and visualise the dynamics in particle accelerators, especially fixed-field alternating-gradient (FFAG) accelerators. We show that PyZgoubi abstracts Zgoubi by wrapping it in an easy-to-use Python framework in order to allow simple construction, parameterisation, visualisation and optimisation of FFAG accelerator lattices. Its object oriented design gives it the flexibility and extensibility required for current novel FFAG design. We apply PyZgoubi to two example FFAGs; this includes determining the dynamic aperture of the PAMELA medical FFAG in the presence of magnet misalignments, and illustrating how PyZgoubi may be used to optimise FFAGs. We also discuss a robust definition of dynamic aperture in an FFAG and show its implementation in PyZgoubi.

Dynamics and acceleration in linear structures

International Nuclear Information System (INIS)

Le Duff, J.

1985-06-01

Basic methods of linear acceleration are reviewed. Both cases of non relativistic and ultra relativistic particles are considered. Induction linac, radiofrequency quadrupole are mentioned. Fundamental parameters of accelerating structures are recalled; they are transit time factor, shunt impedance, quality factor and stored energy, phase velocity and group velocity, filling time, space harmonics in loaded waveguides. Energy gain in linear accelerating structures is considered through standing wave structures and travelling wave structures. Then particle dynamics in linear accelerators is studied: longitudinal motion, transverse motion and dynamics in RFQ

Large-scale conformational changes of Trypanosoma cruzi proline racemase predicted by accelerated molecular dynamics simulation.

Directory of Open Access Journals (Sweden)

César Augusto F de Oliveira

2011-10-01

Full Text Available Chagas' disease, caused by the protozoan parasite Trypanosoma cruzi (T. cruzi, is a life-threatening illness affecting 11-18 million people. Currently available treatments are limited, with unacceptable efficacy and safety profiles. Recent studies have revealed an essential T. cruzi proline racemase enzyme (TcPR as an attractive candidate for improved chemotherapeutic intervention. Conformational changes associated with substrate binding to TcPR are believed to expose critical residues that elicit a host mitogenic B-cell response, a process contributing to parasite persistence and immune system evasion. Characterization of the conformational states of TcPR requires access to long-time-scale motions that are currently inaccessible by standard molecular dynamics simulations. Here we describe advanced accelerated molecular dynamics that extend the effective simulation time and capture large-scale motions of functional relevance. Conservation and fragment mapping analyses identified potential conformational epitopes located in the vicinity of newly identified transient binding pockets. The newly identified open TcPR conformations revealed by this study along with knowledge of the closed to open interconversion mechanism advances our understanding of TcPR function. The results and the strategy adopted in this work constitute an important step toward the rationalization of the molecular basis behind the mitogenic B-cell response of TcPR and provide new insights for future structure-based drug discovery.

Monte Carlo simulation of the Varian Clinac 600C accelerator using dynamic wedges

International Nuclear Information System (INIS)

Moreno, S.; Chaves, A.; Lopes, M.C.; Peralta, L.; Universidade de Lisboa

2004-01-01

The advent of linear accelerators (linac) with computer-controlled dynamic collimation systems and functional and anatomical imaging techniques allowed a more exact delimitation and localisation of the target volume. These advanced treatment techniques inevitably increase the complexity level of dose calculation because of the introduction of the temporal variable. On account of this, it is mandatory the usage of more accurate modelling techniques of the collimator components, as it is the case of Monte Carlo (MC) simulation, which has created an enormous interest in research and clinical practice. Because the patients bodies are not homogenous nor are their body surfaces plane and regular, the dose distribution may differ significantly from the standard distribution from the linac calibration. It is in the treatment planning systems, which include algorithms that are usually measured in homogeneous water phantoms specific for each correction that the dose distributions from each case are obtained. In a real treatment, exception made to superficial lesions, two or more radiation fields are used in order to obtain the recommended dose distributions. The simplest arrangement is made from two parallel and opposed fields that originate a homogeneous dose distribution in almost all the irradiated volume. The available resources are, for example, different types of energies and of radiation, the application of bolus, the protection of healthy structures, the usage of wedged filters and the application of dynamic wedges. A virtual or dynamic wedge, modelled through the movement of one of the jaws, when compared with a set of physical wedges offers an alternative calculation method of an arbitrary number of wedged fields, instead of the four traditional fields of 15 deg, 30 deg, 45 deg and 60 deg angle and obtained with physical wedges. The goal of this work consists in the study of the application of dynamic wedges in tailoring the radiation field by the Varian Clinac 600

Cyclotron beam dynamic simulations in MATLAB

International Nuclear Information System (INIS)

Karamysheva, G.A.; Karamyshev, O.V.; Lepkina, O.E.

2008-01-01

MATLAB is useful for beam dynamic simulations in cyclotrons. Programming in an easy-to-use environment permits creation of models in a short space of time. Advanced graphical tools of MATLAB give good visualization features to created models. The beam dynamic modeling results with an example of two different cyclotron designs are presented. Programming with MATLAB opens wide possibilities of the development of the complex program, able to perform complete block of calculations for the design of the accelerators

Accelerating transient simulation of linear reduced order models.

Energy Technology Data Exchange (ETDEWEB)

Thornquist, Heidi K.; Mei, Ting; Keiter, Eric Richard; Bond, Brad

2011-10-01

Model order reduction (MOR) techniques have been used to facilitate the analysis of dynamical systems for many years. Although existing model reduction techniques are capable of providing huge speedups in the frequency domain analysis (i.e. AC response) of linear systems, such speedups are often not obtained when performing transient analysis on the systems, particularly when coupled with other circuit components. Reduced system size, which is the ostensible goal of MOR methods, is often insufficient to improve transient simulation speed on realistic circuit problems. It can be shown that making the correct reduced order model (ROM) implementation choices is crucial to the practical application of MOR methods. In this report we investigate methods for accelerating the simulation of circuits containing ROM blocks using the circuit simulator Xyce.

Analytical estimation of the dynamic apertures of circular accelerators

International Nuclear Information System (INIS)

Gao, J.

2000-02-01

By considering delta function sextupole, octupole, and deca-pole perturbations and using difference action-angle variable equations, we find some useful analytical formulae for the estimation of the dynamic apertures of circular accelerators due to single sextupole, single octupole, single deca-pole (single 2 m pole in general). Their combined effects are derived based on the Chirikov criterion of the onset of stochastic motions. Comparisons with numerical simulations are made, and the agreement is quite satisfactory. These formulae have been applied to determine the beam-beam limited dynamic aperture in a circular collider. (author)

Dynamic aspects of dislocation motion: atomistic simulations

International Nuclear Information System (INIS)

Bitzek, Erik; Gumbsch, Peter

2005-01-01

Atomistic simulations of accelerating edge and screw dislocations were carried out to study the dynamics of dislocations in a face centered cubic metal. Using two different embedded atom potentials for nickel and a simple slab geometry, the Peierls stress, the effective mass, the line tension and the drag coefficient were determined. A dislocation intersecting an array of voids is used to study dynamic effects in dislocation-obstacle interactions. A pronounced effect caused by inertial overshooting is found. A dynamic line tension model is developed which reproduces the simulation results. The model can be used to easily estimate the magnitude of inertial effects in the interaction of dislocations with localized obstacles for different obstacle strengths, -spacings and temperatures

Electron cloud dynamics in the Cornell Electron Storage Ring Test Accelerator wiggler

Directory of Open Access Journals (Sweden)

C. M. Celata

2011-04-01

Full Text Available The interference of stray electrons (also called “electron clouds” with accelerator beams is important in modern intense-beam accelerators, especially those with beams of positive charge. In magnetic wigglers, used, for instance, for transverse emittance damping, the intense synchrotron radiation produced by the beam can generate an electron cloud of relatively high density. In this paper the complicated dynamics of electron clouds in wigglers is examined using the example of a wiggler in the Cornell Electron Storage Ring Test Accelerator experiment at the Cornell Electron Storage Ring. Three-dimensional particle-in-cell simulations with the WARP-POSINST computer code show different density and dynamics for the electron cloud at locations near the maxima of the vertical wiggler field when compared to locations near the minima. Dynamics in these regions, the electron cloud distribution vs longitudinal position, and the beam coherent tune shift caused by the wiggler electron cloud will be discussed.

Kinetic Simulations of Plasma Energization and Particle Acceleration in Interacting Magnetic Flux Ropes

Science.gov (United States)

Du, S.; Guo, F.; Zank, G. P.; Li, X.; Stanier, A.

2017-12-01

The interaction between magnetic flux ropes has been suggested as a process that leads to efficient plasma energization and particle acceleration (e.g., Drake et al. 2013; Zank et al. 2014). However, the underlying plasma dynamics and acceleration mechanisms are subject to examination of numerical simulations. As a first step of this effort, we carry out 2D fully kinetic simulations using the VPIC code to study the plasma energization and particle acceleration during coalescence of two magnetic flux ropes. Our analysis shows that the reconnection electric field and compression effect are important in plasma energization. The results may help understand the energization process associated with magnetic flux ropes frequently observed in the solar wind near the heliospheric current sheet.

Parallelization of a beam dynamics code and first large scale radio frequency quadrupole simulations

Directory of Open Access Journals (Sweden)

J. Xu

2007-01-01

Full Text Available The design and operation support of hadron (proton and heavy-ion linear accelerators require substantial use of beam dynamics simulation tools. The beam dynamics code TRACK has been originally developed at Argonne National Laboratory (ANL to fulfill the special requirements of the rare isotope accelerator (RIA accelerator systems. From the beginning, the code has been developed to make it useful in the three stages of a linear accelerator project, namely, the design, commissioning, and operation of the machine. To realize this concept, the code has unique features such as end-to-end simulations from the ion source to the final beam destination and automatic procedures for tuning of a multiple charge state heavy-ion beam. The TRACK code has become a general beam dynamics code for hadron linacs and has found wide applications worldwide. Until recently, the code has remained serial except for a simple parallelization used for the simulation of multiple seeds to study the machine errors. To speed up computation, the TRACK Poisson solver has been parallelized. This paper discusses different parallel models for solving the Poisson equation with the primary goal to extend the scalability of the code onto 1024 and more processors of the new generation of supercomputers known as BlueGene (BG/L. Domain decomposition techniques have been adapted and incorporated into the parallel version of the TRACK code. To demonstrate the new capabilities of the parallelized TRACK code, the dynamics of a 45 mA proton beam represented by 10^{8} particles has been simulated through the 325 MHz radio frequency quadrupole and initial accelerator section of the proposed FNAL proton driver. The results show the benefits and advantages of large-scale parallel computing in beam dynamics simulations.

Methods and models for accelerating dynamic simulation of fluid power circuits

Energy Technology Data Exchange (ETDEWEB)

Aaman, R.

2011-07-01

The objective of this dissertation is to improve the dynamic simulation of fluid power circuits. A fluid power circuit is a typical way to implement power transmission in mobile working machines, e.g. cranes, excavators etc. Dynamic simulation is an essential tool in developing controllability and energy-efficient solutions for mobile machines. Efficient dynamic simulation is the basic requirement for the real-time simulation. In the real-time simulation of fluid power circuits there exist numerical problems due to the software and methods used for modelling and integration. A simulation model of a fluid power circuit is typically created using differential and algebraic equations. Efficient numerical methods are required since differential equations must be solved in real time. Unfortunately, simulation software packages offer only a limited selection of numerical solvers. Numerical problems cause noise to the results, which in many cases leads the simulation run to fail. Mathematically the fluid power circuit models are stiff systems of ordinary differential equations. Numerical solution of the stiff systems can be improved by two alternative approaches. The first is to develop numerical solvers suitable for solving stiff systems. The second is to decrease the model stiffness itself by introducing models and algorithms that either decrease the highest eigenvalues or neglect them by introducing steady-state solutions of the stiff parts of the models. The thesis proposes novel methods using the latter approach. The study aims to develop practical methods usable in dynamic simulation of fluid power circuits using explicit fixed-step integration algorithms. In this thesis, two mechanisms which make the system stiff are studied. These are the pressure drop approaching zero in the turbulent orifice model and the volume approaching zero in the equation of pressure build-up. These are the critical areas to which alternative methods for modelling and numerical simulation

Tissue compensation using dynamic collimation on a linear accelerator

International Nuclear Information System (INIS)

Gaballa, Hani E.; Mitev, George; Zwicker, Robert D.; Ting, Joseph Y.; Tercilla, Oscar F.

1995-01-01

Purpose: The availability of computer-controlled collimators on some accelerators has led to techniques for dynamic beam modification, mainly to simulate beam wedge filters. This work addresses the practical aspects of dynamic tissue compensation in one dimension using available treatment-planning software. Methods and Materials: Data derived from the treatment-planning program is used with an iterative calculational routine to determine the monitor unit settings needed for the collimator-controlling computer. The method was first tested by simulating a 60 deg. physical wedge. Further studies were carried out on a specially fabricated plastic phantom that modeled the sagittal contour of the upper torso, neck, and lower head regions. Results: Dynamic wedge point doses generated by the planning program agreed within 1% with the values directly measured in a polystyrene phantom. In the patient phantom, dynamic collimation achieved calculated dose uniformity within 0.5% in a reference plane near the phantom midline. A comparison of computer-generated and measured point doses in this case showed agreement within 3%. Conclusions: Dynamic collimation can provide effective compensation for contours that vary primarily along one direction. A conventional treatment-planning program can be used to plan dynamic collimation and deliver a prescribed dose with reliable accuracy

Radiation belt electron acceleration during the 17 March 2015 geomagnetic storm: Observations and simulations

International Nuclear Information System (INIS)

Li, W.; Ma, Q.; Thorne, R. M.; Bortnik, J.; Zhang, X.-J.

2016-01-01

Various physical processes are known to cause acceleration, loss, and transport of energetic electrons in the Earth's radiation belts, but their quantitative roles in different time and space need further investigation. During the largest storm over the past decade (17 March 2015), relativistic electrons experienced fairly rapid acceleration up to ~7 MeV within 2 days after an initial substantial dropout, as observed by Van Allen Probes. In the present paper, we evaluate the relative roles of various physical processes during the recovery phase of this large storm using a 3-D diffusion simulation. By quantitatively comparing the observed and simulated electron evolution, we found that chorus plays a critical role in accelerating electrons up to several MeV near the developing peak location and produces characteristic flat-top pitch angle distributions. By only including radial diffusion, the simulation underestimates the observed electron acceleration, while radial diffusion plays an important role in redistributing electrons and potentially accelerates them to even higher energies. Moreover, plasmaspheric hiss is found to provide efficient pitch angle scattering losses for hundreds of keV electrons, while its scattering effect on > 1 MeV electrons is relatively slow. Although an additional loss process is required to fully explain the overestimated electron fluxes at multi-MeV, the combined physical processes of radial diffusion and pitch angle and energy diffusion by chorus and hiss reproduce the observed electron dynamics remarkably well, suggesting that quasi-linear diffusion theory is reasonable to evaluate radiation belt electron dynamics during this big storm.

AESS: Accelerated Exact Stochastic Simulation

Science.gov (United States)

Jenkins, David D.; Peterson, Gregory D.

2011-12-01

The Stochastic Simulation Algorithm (SSA) developed by Gillespie provides a powerful mechanism for exploring the behavior of chemical systems with small species populations or with important noise contributions. Gene circuit simulations for systems biology commonly employ the SSA method, as do ecological applications. This algorithm tends to be computationally expensive, so researchers seek an efficient implementation of SSA. In this program package, the Accelerated Exact Stochastic Simulation Algorithm (AESS) contains optimized implementations of Gillespie's SSA that improve the performance of individual simulation runs or ensembles of simulations used for sweeping parameters or to provide statistically significant results. Program summaryProgram title: AESS Catalogue identifier: AEJW_v1_0 Program summary URL:http://cpc.cs.qub.ac.uk/summaries/AEJW_v1_0.html Program obtainable from: CPC Program Library, Queen's University, Belfast, N. Ireland Licensing provisions: University of Tennessee copyright agreement No. of lines in distributed program, including test data, etc.: 10 861 No. of bytes in distributed program, including test data, etc.: 394 631 Distribution format: tar.gz Programming language: C for processors, CUDA for NVIDIA GPUs Computer: Developed and tested on various x86 computers and NVIDIA C1060 Tesla and GTX 480 Fermi GPUs. The system targets x86 workstations, optionally with multicore processors or NVIDIA GPUs as accelerators. Operating system: Tested under Ubuntu Linux OS and CentOS 5.5 Linux OS Classification: 3, 16.12 Nature of problem: Simulation of chemical systems, particularly with low species populations, can be accurately performed using Gillespie's method of stochastic simulation. Numerous variations on the original stochastic simulation algorithm have been developed, including approaches that produce results with statistics that exactly match the chemical master equation (CME) as well as other approaches that approximate the CME. Solution

Iteration and accelerator dynamics

International Nuclear Information System (INIS)

Peggs, S.

1987-10-01

Four examples of iteration in accelerator dynamics are studied in this paper. The first three show how iterations of the simplest maps reproduce most of the significant nonlinear behavior in real accelerators. Each of these examples can be easily reproduced by the reader, at the minimal cost of writing only 20 or 40 lines of code. The fourth example outlines a general way to iteratively solve nonlinear difference equations, analytically or numerically

ELECTROMAGNETIC SIMULATIONS OF LINEAR PROTON ACCELERATOR STRUCTURES USING DIELECTRIC WALL ACCELERATORS

International Nuclear Information System (INIS)

Nelson, S; Poole, B; Caporaso, G

2007-01-01

Proton accelerator structures for medical applications using Dielectric Wall Accelerator (DWA) technology allow for the utilization of high electric field gradients on the order of 100 MV/m to accelerate the proton bunch. Medical applications involving cancer therapy treatment usually desire short bunch lengths on the order of hundreds of picoseconds in order to limit the extent of the energy deposited in the tumor site (in 3D space, time, and deposited proton charge). Electromagnetic simulations of the DWA structure, in combination with injections of proton bunches have been performed using 3D finite difference codes in combination with particle pushing codes. Electromagnetic simulations of DWA structures includes these effects and also include the details of the switch configuration and how that switch time affects the electric field pulse which accelerates the particle beam

LEGO - A Class Library for Accelerator Design and Simulation

International Nuclear Information System (INIS)

Cai, Yunhai

1998-01-01

An object-oriented class library of accelerator design and simulation is designed and implemented in a simple and modular fashion. All physics of single-particle dynamics is implemented based on the Hamiltonian in the local frame of the component. Symplectic integrators are used to approximate the integration of the Hamiltonian. A differential algebra class is introduced to extract a Taylor map up to arbitrary order. Analysis of optics is done in the same way both for the linear and non-linear cases. Recently, Monte Carlo simulation of synchrotron radiation has been added into the library. The code is used to design and simulate the lattices of the PEP-II and SPEAR3. And it is also used for the commissioning of the PEP-II. Some examples of how to use the library will be given

Accelerator simulation using computers

International Nuclear Information System (INIS)

Lee, M.; Zambre, Y.; Corbett, W.

1992-01-01

Every accelerator or storage ring system consists of a charged particle beam propagating through a beam line. Although a number of computer programs exits that simulate the propagation of a beam in a given beam line, only a few provide the capabilities for designing, commissioning and operating the beam line. This paper shows how a ''multi-track'' simulation and analysis code can be used for these applications

Single particle dynamics in circular accelerators

International Nuclear Information System (INIS)

Ruth, R.D.

1986-10-01

The purpose of this paper is to introduce the reader to the theory associated with the transverse dynamics of single particle, in circular accelerators. The discussion begins with a review of Hamiltonian dynamics and canonical transformations. The case of a single particle in a circular accelerator is considered with a discussion of non-linear terms and chromaticity. The canonical perturbation theory is presented and nonlinear resonances are considered. Finally, the concept of renormalization and residue criterion are examined. (FI)

Dynamic Model for the Z Accelerator Vacuum Section Based on Transmission Line Code%Dynamic Model for the Z Accelerator Vacuum Section Based on Transmission Line Code

Institute of Scientific and Technical Information of China (English)

呼义翔; 雷天时; 吴撼宇; 郭宁; 韩娟娟; 邱爱慈; 王亮平; 黄涛; 丛培天; 张信军; 李岩; 曾正中; 孙铁平

2011-01-01

The transmission-line-circuit model of the Z accelerator, developed originally by W. A. STYGAR, P. A. CORCORAN, et al., is revised. The revised model uses different calculations for the electron loss and flow impedance in the magnetically insulated transmission line system of the Z accelerator before and after magnetic insulation is established. By including electron pressure and zero electric field at the cathode, a closed set of equations is obtained at each time step, and dynamic shunt resistance （used to represent any electron loss to the anode） and flow impedance are solved, which have been incorporated into the transmission line code for simulations of the vacuum section in the Z accelerator. Finally, the results are discussed in comparison with earlier findings to show the effectiveness and limitations of the model.

Deflation acceleration of lattice QCD simulations

International Nuclear Information System (INIS)

Luescher, Martin

2007-01-01

Close to the chiral limit, many calculations in numerical lattice QCD can potentially be accelerated using low-mode deflation techniques. In this paper it is shown that the recently introduced domain-decomposed deflation subspaces can be propagated along the field trajectories generated by the Hybrid Monte Carlo (HMC) algorithm with a modest effort. The quark forces that drive the simulation may then be computed using a deflation-accelerated solver for the lattice Dirac equation. As a consequence, the computer time required for the simulations is significantly reduced and an improved scaling behaviour of the simulation algorithm with respect to the quark mass is achieved

Deflation acceleration of lattice QCD simulations

CERN Document Server

Lüscher, Martin

2007-01-01

Close to the chiral limit, many calculations in numerical lattice QCD can potentially be accelerated using low-mode deflation techniques. In this paper it is shown that the recently introduced domain-decomposed deflation subspaces can be propagated along the field trajectories generated by the Hybrid Monte Carlo (HMC) algorithm with a modest effort. The quark forces that drive the simulation may then be computed using a deflation-accelerated solver for the lattice Dirac equation. As a consequence, the computer time required for the simulations is significantly reduced and an improved scaling behaviour of the simulation algorithm with respect to the quark mass is achieved.

Longitudinal and transverse dynamics of ions from residual gas in an electron accelerator

Science.gov (United States)

Gamelin, A.; Bruni, C.; Radevych, D.

2018-05-01

The ion cloud produced from residual gas in an electron accelerator can degrade machine performances and produce instabilities. The ion dynamics in an accelerator is governed by the beam-ion interaction, magnetic fields and eventual mitigation strategies. Due to the fact that the beam has a nonuniform transverse size along its orbit, the ions move longitudinally and accumulate naturally at some points in the accelerator. In order to design effective mitigation strategies it is necessary to understand the ion dynamics not only in the transverse plane but also in the longitudinal direction. After introducing the physics behind the beam-ion interaction, we show how to get accumulation points for a realistic electron storage ring lattice. Simulations of the ion cloud dynamics, including the effect of magnetic fields on the ions, clearing electrodes and clearing gaps are shown. Longitudinal ion trapping due to the magnetic mirror effect in the dipole fringe fields is also detailed. Finally, the effectiveness of clearing electrode using longitudinal clearing fields is discussed and compared to clearing electrodes producing transverse field only.

Beam dynamics simulation of the Spallation Neutron Source linear accelerator

International Nuclear Information System (INIS)

Takeda, H.; Billen, J.H.; Bhatia, T.S.

1998-01-01

The accelerating structure for Spallation Neutron Source (SNS) consists of a radio-frequency-quadrupole-linac (RFQ), a drift-tube-linac (DTL), a coupled-cavity-drift-tube-linac (CCDTL), and a coupled-cavity-linac (CCL). The linac is operated at room temperature. The authors discuss the detailed design of linac which accelerates an H - pulsed beam coming out from RFQ at 2.5 MeV to 1000 MeV. They show a detailed transition from 402.5 MHz DTL with a 4 βλ structure to a CCDTL operated at 805 MHz with a 12 βλ structure. After a discussion of overall feature of the linac, they present an end-to-end particle simulation using the new version of the PARMILA code for a beam starting from the RFQ entrance through the rest of the linac. At 1000 MeV, the beam is transported to a storage ring. The storage ring requires a large (±500-keV) energy spread. This is accomplished by operating the rf-phase in the last section of the linac so the particles are at the unstable fixed point of the separatrix. They present zero-current phase advance, beam size, and beam emittance along the entire linac

High energy gain in three-dimensional simulations of light sail acceleration

Energy Technology Data Exchange (ETDEWEB)

Sgattoni, A., E-mail: andrea.sgattoni@polimi.it [Dipartimento di Energia, Politecnico di Milano, Milano (Italy); CNR, Istituto Nazionale di Ottica, u.o.s. “Adriano Gozzini,” Pisa (Italy); Sinigardi, S. [CNR, Istituto Nazionale di Ottica, u.o.s. “Adriano Gozzini,” Pisa (Italy); Dipartimento di Fisica e Astronomia, Università di Bologna, Bologna (Italy); INFN sezione di Bologna, Bologna (Italy); Macchi, A. [CNR, Istituto Nazionale di Ottica, u.o.s. “Adriano Gozzini,” Pisa (Italy); Dipartimento di Fisica “Enrico Fermi,” Università di Pisa, Pisa (Italy)

2014-08-25

The dynamics of radiation pressure acceleration in the relativistic light sail regime are analysed by means of large scale, three-dimensional (3D) particle-in-cell simulations. Differently to other mechanisms, the 3D dynamics leads to faster and higher energy gain than in 1D or 2D geometry. This effect is caused by the local decrease of the target density due to transverse expansion leading to a “lighter sail.” However, the rarefaction of the target leads to an earlier transition to transparency limiting the energy gain. A transverse instability leads to a structured and inhomogeneous ion distribution.

High energy gain in three-dimensional simulations of light sail acceleration

International Nuclear Information System (INIS)

Sgattoni, A.; Sinigardi, S.; Macchi, A.

2014-01-01

The dynamics of radiation pressure acceleration in the relativistic light sail regime are analysed by means of large scale, three-dimensional (3D) particle-in-cell simulations. Differently to other mechanisms, the 3D dynamics leads to faster and higher energy gain than in 1D or 2D geometry. This effect is caused by the local decrease of the target density due to transverse expansion leading to a “lighter sail.” However, the rarefaction of the target leads to an earlier transition to transparency limiting the energy gain. A transverse instability leads to a structured and inhomogeneous ion distribution.

Accelerating Climate and Weather Simulations through Hybrid Computing

Science.gov (United States)

Zhou, Shujia; Cruz, Carlos; Duffy, Daniel; Tucker, Robert; Purcell, Mark

2011-01-01

Unconventional multi- and many-core processors (e.g. IBM (R) Cell B.E.(TM) and NVIDIA (R) GPU) have emerged as effective accelerators in trial climate and weather simulations. Yet these climate and weather models typically run on parallel computers with conventional processors (e.g. Intel, AMD, and IBM) using Message Passing Interface. To address challenges involved in efficiently and easily connecting accelerators to parallel computers, we investigated using IBM's Dynamic Application Virtualization (TM) (IBM DAV) software in a prototype hybrid computing system with representative climate and weather model components. The hybrid system comprises two Intel blades and two IBM QS22 Cell B.E. blades, connected with both InfiniBand(R) (IB) and 1-Gigabit Ethernet. The system significantly accelerates a solar radiation model component by offloading compute-intensive calculations to the Cell blades. Systematic tests show that IBM DAV can seamlessly offload compute-intensive calculations from Intel blades to Cell B.E. blades in a scalable, load-balanced manner. However, noticeable communication overhead was observed, mainly due to IP over the IB protocol. Full utilization of IB Sockets Direct Protocol and the lower latency production version of IBM DAV will reduce this overhead.

Self-optimized construction of transition rate matrices from accelerated atomistic simulations with Bayesian uncertainty quantification

Science.gov (United States)

Swinburne, Thomas D.; Perez, Danny

2018-05-01

A massively parallel method to build large transition rate matrices from temperature-accelerated molecular dynamics trajectories is presented. Bayesian Markov model analysis is used to estimate the expected residence time in the known state space, providing crucial uncertainty quantification for higher-scale simulation schemes such as kinetic Monte Carlo or cluster dynamics. The estimators are additionally used to optimize where exploration is performed and the degree of temperature acceleration on the fly, giving an autonomous, optimal procedure to explore the state space of complex systems. The method is tested against exactly solvable models and used to explore the dynamics of C15 interstitial defects in iron. Our uncertainty quantification scheme allows for accurate modeling of the evolution of these defects over timescales of several seconds.

Dynamic analysis of an accelerator-driven fluid-fueled subcritical radioactive waste burning system

International Nuclear Information System (INIS)

Woosley, M.L. Jr.; Rydin, R.A.

1998-01-01

The recent revival of interest in accelerator-driven subcritical fluid-fueled systems is documented. Several important applications of these systems are mentioned, and this is used to motivate the need for dynamic analysis of the nuclear kinetics of such systems. A physical description of the Los alamos National Laboratory accelerator-based conversion (ABC) concept is provided. This system is used as the basis for the kinetics study in this research. The current approach to the dynamic simulation of an accelerator-driven subcritical fluid-fueled system includes four functional elements: a discrete ordinates model is used to calculate the flux distribution for the source-driven system; a nodal convection model is used to calculate time-dependent isotope and temperature distributions that impact reactivity; a nodal importance weighting model is used to calculate the reactivity impact of temperature and isotope distributions and to feed this information back to the time-dependent nodal convection model; and a transient driver is used to simulate transients, model the balance of plant, and record simulation data. Specific transients that have been analyzed with the current modeling system are discussed. These transients include loss-of-flow and loss-of-cooling accidents, xenon and samarium transients, and cold-plug and overfueling events. The results of various transients have uncovered unpredictable behavior, unresolved design issues, and the need for active control. The need for the development of a nodal-coupling spatial kinetics model is mentioned

Analytical researches on the accelerating structures, wakefields, and beam dynamics for future linear colliders

International Nuclear Information System (INIS)

Gao, J.

1996-01-01

The research works presented in this memoir are oriented not only to the R and D programs towards future linear colliders, but also to the pedagogic purposes. The first part of this memoir (from Chapter 2 to Chapter 9) establishes an analytical framework of the disk-loaded slow wave accelerating structures with can be served as the advanced courses for the students who have got some basic trainings in the linear accelerator theories. The analytical formulae derived in this part describe clearly the properties of the disk-loaded accelerating structures, such as group velocity, shunt impedance, coupling coefficients κ and β, loss factors, and wake fields. The second part (from Chapter 11 to Chapter 13) gives the beam dynamics simulations and the final proposal of an S-Band Superconducting Linear Collider (SSLC) which is aimed to avoid the dark current problem in TESLA project. This memoir has not included all the works conducted since April 1992, such as beam dynamics simulations for CLIC Test Facility (CFT-2) and the design of High Charge Structures (HCS) (11π/12 mode) for CFT-2, in order to make this memoir more harmonious, coherent and continuous. (author)

Accelerating population balance-Monte Carlo simulation for coagulation dynamics from the Markov jump model, stochastic algorithm and GPU parallel computing

International Nuclear Information System (INIS)

Xu, Zuwei; Zhao, Haibo; Zheng, Chuguang

2015-01-01

This paper proposes a comprehensive framework for accelerating population balance-Monte Carlo (PBMC) simulation of particle coagulation dynamics. By combining Markov jump model, weighted majorant kernel and GPU (graphics processing unit) parallel computing, a significant gain in computational efficiency is achieved. The Markov jump model constructs a coagulation-rule matrix of differentially-weighted simulation particles, so as to capture the time evolution of particle size distribution with low statistical noise over the full size range and as far as possible to reduce the number of time loopings. Here three coagulation rules are highlighted and it is found that constructing appropriate coagulation rule provides a route to attain the compromise between accuracy and cost of PBMC methods. Further, in order to avoid double looping over all simulation particles when considering the two-particle events (typically, particle coagulation), the weighted majorant kernel is introduced to estimate the maximum coagulation rates being used for acceptance–rejection processes by single-looping over all particles, and meanwhile the mean time-step of coagulation event is estimated by summing the coagulation kernels of rejected and accepted particle pairs. The computational load of these fast differentially-weighted PBMC simulations (based on the Markov jump model) is reduced greatly to be proportional to the number of simulation particles in a zero-dimensional system (single cell). Finally, for a spatially inhomogeneous multi-dimensional (multi-cell) simulation, the proposed fast PBMC is performed in each cell, and multiple cells are parallel processed by multi-cores on a GPU that can implement the massively threaded data-parallel tasks to obtain remarkable speedup ratio (comparing with CPU computation, the speedup ratio of GPU parallel computing is as high as 200 in a case of 100 cells with 10 000 simulation particles per cell). These accelerating approaches of PBMC are

An improved cellular automata model for train operation simulation with dynamic acceleration

Science.gov (United States)

Li, Wen-Jun; Nie, Lei

2018-03-01

Urban rail transit plays an important role in the urban public traffic because of its advantages of fast speed, large transport capacity, high safety, reliability and low pollution. This study proposes an improved cellular automaton (CA) model by considering the dynamic characteristic of the train acceleration to analyze the energy consumption and train running time. Constructing an effective model for calculating energy consumption to aid train operation improvement is the basis for studying and analyzing energy-saving measures for urban rail transit system operation.

Soil dynamics and accelerated erosion: a sensitivity analysis of the LPJ Dynamic vegetation model

Science.gov (United States)

Bouchoms, Samuel; Van Oost, Kristof; Vanacker, Veerle; Kaplan, Jed O.; Vanwalleghem, Tom

2013-04-01

It is widely accepted that humans have become a major geomorphic force by disturbing natural vegetation patterns. Land conversion for agriculture purposes removes the protection of soils by the natural vegetation and leads to increased soil erosion by one to two orders of magnitude, breaking the balance that exists between the loss of soils and its production. Accelerated erosion and deposition have a strong influence on evolution and heterogeneity of basic soil characteristics (soil thickness, hydrology, horizon development,…) as well as on organic matter storage and cycling. Yet, since they are operating at a long time scale, those processes are not represented in state-of-art Dynamic Global Vegetation Models, which is a clear lack when exploring vegetation dynamics over past centuries. The main objectives of this paper are (i) to test the sensitivity of a Dynamic Global Vegetation Model, in terms of NPP and organic matter turnover, variations in state variables in response to accelerated erosion and (ii) to assess the performance of the model under the impact of erosion for a case-study in Central Spain. We evaluated the Lund-Postdam-Jena Dynamic Vegetation Model (LPJ DVGM) (Sitch et al, 2003) which simulates vegetation growth and carbon pools at the surface and in the soil based on climatic, pedologic and topographic variables. We assessed its reactions to changes in key soil properties that are affected by erosion such as texture and soil depth. We present the results of where we manipulated soil texture and bulk density while keeping the environmental drivers of climate, slope and altitude constant. For parameters exhibiting a strong control on NPP or SOM, a factorial analysis was conducted to test for interaction effects. The simulations show an important dependence on the clay content, especially for the slow cycling carbon pools and the biomass production, though the underground litter seems to be mostly influenced by the silt content. The fast cycling C

Accelerating the convergence of path integral dynamics with a generalized Langevin equation

Science.gov (United States)

Ceriotti, Michele; Manolopoulos, David E.; Parrinello, Michele

2011-02-01

The quantum nature of nuclei plays an important role in the accurate modelling of light atoms such as hydrogen, but it is often neglected in simulations due to the high computational overhead involved. It has recently been shown that zero-point energy effects can be included comparatively cheaply in simulations of harmonic and quasiharmonic systems by augmenting classical molecular dynamics with a generalized Langevin equation (GLE). Here we describe how a similar approach can be used to accelerate the convergence of path integral (PI) molecular dynamics to the exact quantum mechanical result in more strongly anharmonic systems exhibiting both zero point energy and tunnelling effects. The resulting PI-GLE method is illustrated with applications to a double-well tunnelling problem and to liquid water.

Accelerating the convergence of path integral dynamics with a generalized Langevin equation.

Science.gov (United States)

Ceriotti, Michele; Manolopoulos, David E; Parrinello, Michele

2011-02-28

The quantum nature of nuclei plays an important role in the accurate modelling of light atoms such as hydrogen, but it is often neglected in simulations due to the high computational overhead involved. It has recently been shown that zero-point energy effects can be included comparatively cheaply in simulations of harmonic and quasiharmonic systems by augmenting classical molecular dynamics with a generalized Langevin equation (GLE). Here we describe how a similar approach can be used to accelerate the convergence of path integral (PI) molecular dynamics to the exact quantum mechanical result in more strongly anharmonic systems exhibiting both zero point energy and tunnelling effects. The resulting PI-GLE method is illustrated with applications to a double-well tunnelling problem and to liquid water.

Building a dynamic code to simulate new reactor concepts

International Nuclear Information System (INIS)

Catsaros, N.; Gaveau, B.; Jaekel, M.-T.; Maillard, J.; Maurel, G.; Savva, P.; Silva, J.; Varvayanni, M.

2012-01-01

Highlights: ► We develop a stochastic neutronic code based on an existing High Energy Physics code. ► The code simulates innovative reactor designs including Accelerator Driven Systems. ► Core materials evolution will be dynamically simulated, including fuel burnup. ► Continuous feedback between the main inter-related parameters will be established. ► A description of the current research development and achievements is also given. - Abstract: Innovative nuclear reactor designs have been proposed, such as the Accelerator Driven Systems (ADSs), the “candle” reactors, etc. These reactor designs introduce computational nuclear technology problems the solution of which necessitates a new, global and dynamic computational approach of the system. A continuous feedback procedure must be established between the main inter-related parameters of the system such as the chemical, physical and isotopic composition of the core, the neutron flux distribution and the temperature field. Furthermore, as far as ADSs are concerned, the ability of the computational tool to simulate the nuclear cascade created from the interaction of accelerated protons with the spallation target as well as the produced neutrons, is also required. The new Monte Carlo code ANET (Advanced Neutronics with Evolution and Thermal hydraulic feedback) is being developed based on the GEANT3 High Energy Physics code, aiming to progressively satisfy all the above requirements. A description of the capabilities and methodologies implemented in the present version of ANET is given here, together with some illustrative applications of the code.

Accelerated molecular dynamics methods: introduction and recent developments

Energy Technology Data Exchange (ETDEWEB)

Uberuaga, Blas Pedro [Los Alamos National Laboratory; Voter, Arthur F [Los Alamos National Laboratory; Perez, Danny [Los Alamos National Laboratory; Shim, Y [UNIV OF TOLEDO; Amar, J G [UNIV OF TOLEDO

2009-01-01

A long-standing limitation in the use of molecular dynamics (MD) simulation is that it can only be applied directly to processes that take place on very short timescales: nanoseconds if empirical potentials are employed, or picoseconds if we rely on electronic structure methods. Many processes of interest in chemistry, biochemistry, and materials science require study over microseconds and beyond, due either to the natural timescale for the evolution or to the duration of the experiment of interest. Ignoring the case of liquids xxx, the dynamics on these time scales is typically characterized by infrequent-event transitions, from state to state, usually involving an energy barrier. There is a long and venerable tradition in chemistry of using transition state theory (TST) [10, 19, 23] to directly compute rate constants for these kinds of activated processes. If needed dynamical corrections to the TST rate, and even quantum corrections, can be computed to achieve an accuracy suitable for the problem at hand. These rate constants then allow them to understand the system behavior on longer time scales than we can directly reach with MD. For complex systems with many reaction paths, the TST rates can be fed into a stochastic simulation procedure such as kinetic Monte Carlo xxx, and a direct simulation of the advance of the system through its possible states can be obtained in a probabilistically exact way. A problem that has become more evident in recent years, however, is that for many systems of interest there is a complexity that makes it difficult, if not impossible, to determine all the relevant reaction paths to which TST should be applied. This is a serious issue, as omitted transition pathways can have uncontrollable consequences on the simulated long-time kinetics. Over the last decade or so, we have been developing a new class of methods for treating the long-time dynamics in these complex, infrequent-event systems. Rather than trying to guess in advance what

Accelerated molecular dynamics methods: introduction and recent developments

International Nuclear Information System (INIS)

Uberuaga, Blas Pedro; Voter, Arthur F.; Perez, Danny; Shim, Y.; Amar, J.G.

2009-01-01

A long-standing limitation in the use of molecular dynamics (MD) simulation is that it can only be applied directly to processes that take place on very short timescales: nanoseconds if empirical potentials are employed, or picoseconds if we rely on electronic structure methods. Many processes of interest in chemistry, biochemistry, and materials science require study over microseconds and beyond, due either to the natural timescale for the evolution or to the duration of the experiment of interest. Ignoring the case of liquids xxx, the dynamics on these time scales is typically characterized by infrequent-event transitions, from state to state, usually involving an energy barrier. There is a long and venerable tradition in chemistry of using transition state theory (TST) (10, 19, 23) to directly compute rate constants for these kinds of activated processes. If needed dynamical corrections to the TST rate, and even quantum corrections, can be computed to achieve an accuracy suitable for the problem at hand. These rate constants then allow them to understand the system behavior on longer time scales than we can directly reach with MD. For complex systems with many reaction paths, the TST rates can be fed into a stochastic simulation procedure such as kinetic Monte Carlo xxx, and a direct simulation of the advance of the system through its possible states can be obtained in a probabilistically exact way. A problem that has become more evident in recent years, however, is that for many systems of interest there is a complexity that makes it difficult, if not impossible, to determine all the relevant reaction paths to which TST should be applied. This is a serious issue, as omitted transition pathways can have uncontrollable consequences on the simulated long-time kinetics. Over the last decade or so, we have been developing a new class of methods for treating the long-time dynamics in these complex, infrequent-event systems. Rather than trying to guess in advance what

Electron-beam dynamics for an advanced flash-radiography accelerator

Energy Technology Data Exchange (ETDEWEB)

Ekdahl, Carl August Jr. [Los Alamos National Laboratory

2015-06-22

Beam dynamics issues were assessed for a new linear induction electron accelerator. Special attention was paid to equilibrium beam transport, possible emittance growth, and beam stability. Especially problematic would be high-frequency beam instabilities that could blur individual radiographic source spots, low-frequency beam motion that could cause pulse-to-pulse spot displacement, and emittance growth that could enlarge the source spots. Beam physics issues were examined through theoretical analysis and computer simulations, including particle-in cell (PIC) codes. Beam instabilities investigated included beam breakup (BBU), image displacement, diocotron, parametric envelope, ion hose, and the resistive wall instability. Beam corkscrew motion and emittance growth from beam mismatch were also studied. It was concluded that a beam with radiographic quality equivalent to the present accelerators at Los Alamos will result if the same engineering standards and construction details are upheld.

Automated detection and analysis of particle beams in laser-plasma accelerator simulations

International Nuclear Information System (INIS)

Ushizima, Daniela Mayumi; Geddes, C.G.; Cormier-Michel, E.; Bethel, E. Wes; Jacobsen, J.; Prabhat; Ruebel, O.; Weber, G.; Hamann, B.

2010-01-01

scientific data mining is increasingly considered. In plasma simulations, Bagherjeiran et al. presented a comprehensive report on applying graph-based techniques for orbit classification. They used the KAM classifier to label points and components in single and multiple orbits. Love et al. conducted an image space analysis of coherent structures in plasma simulations. They used a number of segmentation and region-growing techniques to isolate regions of interest in orbit plots. Both approaches analyzed particle accelerator data, targeting the system dynamics in terms of particle orbits. However, they did not address particle dynamics as a function of time or inspected the behavior of bunches of particles. Ruebel et al. addressed the visual analysis of massive laser wakefield acceleration (LWFA) simulation data using interactive procedures to query the data. Sophisticated visualization tools were provided to inspect the data manually. Ruebel et al. have integrated these tools to the visualization and analysis system VisIt, in addition to utilizing efficient data management based on HDF5, H5Part, and the index/query tool FastBit. In Ruebel et al. proposed automatic beam path analysis using a suite of methods to classify particles in simulation data and to analyze their temporal evolution. To enable researchers to accurately define particle beams, the method computes a set of measures based on the path of particles relative to the distance of the particles to a beam. To achieve good performance, this framework uses an analysis pipeline designed to quickly reduce the amount of data that needs to be considered in the actual path distance computation. As part of this process, region-growing methods are utilized to detect particle bunches at single time steps. Efficient data reduction is essential to enable automated analysis of large data sets as described in the next section, where data reduction methods are steered to the particular requirements of our clustering analysis

Quantum optical device accelerating dynamic programming

OpenAIRE

Grigoriev, D.; Kazakov, A.; Vakulenko, S.

2005-01-01

In this paper we discuss analogue computers based on quantum optical systems accelerating dynamic programming for some computational problems. These computers, at least in principle, can be realized by actually existing devices. We estimate an acceleration in resolving of some NP-hard problems that can be obtained in such a way versus deterministic computers

Modification of the RTMTRACE program for numerical simulation of particle dynamics at racetrack microtrons with account of space charge forces

International Nuclear Information System (INIS)

Surma, I.V.; Shvedunov, V.I.

1993-01-01

The paper presents modification results of the program for simulation of particle dynamics in cyclic accelerators with RTMTRACE linear gap. The program was modified with regard for the effect of space charge effect on particle dynamics. Calculation results of particle dynamics in 1 MeV energy continuous-duty accelerator with 10 kw beam were used to develop continuous powerful commercial accelerator. 3 refs., 2 figs

FPGA-accelerated simulation of computer systems

CERN Document Server

Angepat, Hari; Chung, Eric S; Hoe, James C; Chung, Eric S

2014-01-01

To date, the most common form of simulators of computer systems are software-based running on standard computers. One promising approach to improve simulation performance is to apply hardware, specifically reconfigurable hardware in the form of field programmable gate arrays (FPGAs). This manuscript describes various approaches of using FPGAs to accelerate software-implemented simulation of computer systems and selected simulators that incorporate those techniques. More precisely, we describe a simulation architecture taxonomy that incorporates a simulation architecture specifically designed f

Biomechanics and muscle coordination of human walking. Part I: introduction to concepts, power transfer, dynamics and simulations.

Science.gov (United States)

Zajac, Felix E; Neptune, Richard R; Kautz, Steven A

2002-12-01

Current understanding of how muscles coordinate walking in humans is derived from analyses of body motion, ground reaction force and EMG measurements. This is Part I of a two-part review that emphasizes how muscle-driven dynamics-based simulations assist in the understanding of individual muscle function in walking, especially the causal relationships between muscle force generation and walking kinematics and kinetics. Part I reviews the strengths and limitations of Newton-Euler inverse dynamics and dynamical simulations, including the ability of each to find the contributions of individual muscles to the acceleration/deceleration of the body segments. We caution against using the concept of biarticular muscles transferring power from one joint to another to infer muscle coordination principles because energy flow among segments, even the adjacent segments associated with the joints, cannot be inferred from computation of joint powers and segmental angular velocities alone. Rather, we encourage the use of dynamical simulations to perform muscle-induced segmental acceleration and power analyses. Such analyses have shown that the exchange of segmental energy caused by the forces or accelerations induced by a muscle can be fundamentally invariant to whether the muscle is shortening, lengthening, or neither. How simulation analyses lead to understanding the coordination of seated pedaling, rather than walking, is discussed in this first part because the dynamics of pedaling are much simpler, allowing important concepts to be revealed. We elucidate how energy produced by muscles is delivered to the crank through the synergistic action of other non-energy producing muscles; specifically, that a major function performed by a muscle arises from the instantaneous segmental accelerations and redistribution of segmental energy throughout the body caused by its force generation. Part II reviews how dynamical simulations provide insight into muscle coordination of walking.

Beam dynamics simulation of W-band photo injector

International Nuclear Information System (INIS)

Zhu Xiongwei

2002-01-01

The authors present a beam dynamics simulation study on 1.6 cell, high gradient W-Band photocathode RF gun which is capable of generating and accelerating 300 pC electron bunch. The design system is made up of 91.392 GHz photocathode RF gun and 91.392 GHz travelling wave linac cells. Based on the numerical simulation using SUPERFISH and PARMELA and the conventional RF linac scaling law, the design will produce 300 pC at 1.74 MeV with bunch length 0.72 ps and normalized transverse emittance 0.55 mm mrad. The authors study the beam dynamics in high frequency and high gradient; due to the high gradient, the ponderomotive effect plays an important role in beam dynamics; the authors found the ponderomotive effect still exist with only the fundamental space harmonics (synchrotron mode) due to the coupling of the transverse and longitudinal motion

Simulation of a medical linear accelerator for teaching purposes.

Science.gov (United States)

Anderson, Rhys; Lamey, Michael; MacPherson, Miller; Carlone, Marco

2015-05-08

Simulation software for medical linear accelerators that can be used in a teaching environment was developed. The components of linear accelerators were modeled to first order accuracy using analytical expressions taken from the literature. The expressions used constants that were empirically set such that realistic response could be expected. These expressions were programmed in a MATLAB environment with a graphical user interface in order to produce an environment similar to that of linear accelerator service mode. The program was evaluated in a systematic fashion, where parameters affecting the clinical properties of medical linear accelerator beams were adjusted independently, and the effects on beam energy and dose rate recorded. These results confirmed that beam tuning adjustments could be simulated in a simple environment. Further, adjustment of service parameters over a large range was possible, and this allows the demonstration of linear accelerator physics in an environment accessible to both medical physicists and linear accelerator service engineers. In conclusion, a software tool, named SIMAC, was developed to improve the teaching of linear accelerator physics in a simulated environment. SIMAC performed in a similar manner to medical linear accelerators. The authors hope that this tool will be valuable as a teaching tool for medical physicists and linear accelerator service engineers.

Standardization of accelerator irradiation procedures for simulation of neutron induced damage in reactor structural materials

Science.gov (United States)

Shao, Lin; Gigax, Jonathan; Chen, Di; Kim, Hyosim; Garner, Frank A.; Wang, Jing; Toloczko, Mychailo B.

2017-10-01

Self-ion irradiation is widely used as a method to simulate neutron damage in reactor structural materials. Accelerator-based simulation of void swelling, however, introduces a number of neutron-atypical features which require careful data extraction and, in some cases, introduction of innovative irradiation techniques to alleviate these issues. We briefly summarize three such atypical features: defect imbalance effects, pulsed beam effects, and carbon contamination. The latter issue has just been recently recognized as being relevant to simulation of void swelling and is discussed here in greater detail. It is shown that carbon ions are entrained in the ion beam by Coulomb force drag and accelerated toward the target surface. Beam-contaminant interactions are modeled using molecular dynamics simulation. By applying a multiple beam deflection technique, carbon and other contaminants can be effectively filtered out, as demonstrated in an irradiation of HT-9 alloy by 3.5 MeV Fe ions.

GPU-accelerated micromagnetic simulations using cloud computing

Energy Technology Data Exchange (ETDEWEB)

Jermain, C.L., E-mail: clj72@cornell.edu [Cornell University, Ithaca, NY 14853 (United States); Rowlands, G.E.; Buhrman, R.A. [Cornell University, Ithaca, NY 14853 (United States); Ralph, D.C. [Cornell University, Ithaca, NY 14853 (United States); Kavli Institute at Cornell, Ithaca, NY 14853 (United States)

2016-03-01

Highly parallel graphics processing units (GPUs) can improve the speed of micromagnetic simulations significantly as compared to conventional computing using central processing units (CPUs). We present a strategy for performing GPU-accelerated micromagnetic simulations by utilizing cost-effective GPU access offered by cloud computing services with an open-source Python-based program for running the MuMax3 micromagnetics code remotely. We analyze the scaling and cost benefits of using cloud computing for micromagnetics. - Highlights: • The benefits of cloud computing for GPU-accelerated micromagnetics are examined. • We present the MuCloud software for running simulations on cloud computing. • Simulation run times are measured to benchmark cloud computing performance. • Comparison benchmarks are analyzed between CPU and GPU based solvers.

GPU-accelerated micromagnetic simulations using cloud computing

International Nuclear Information System (INIS)

Jermain, C.L.; Rowlands, G.E.; Buhrman, R.A.; Ralph, D.C.

2016-01-01

Highly parallel graphics processing units (GPUs) can improve the speed of micromagnetic simulations significantly as compared to conventional computing using central processing units (CPUs). We present a strategy for performing GPU-accelerated micromagnetic simulations by utilizing cost-effective GPU access offered by cloud computing services with an open-source Python-based program for running the MuMax3 micromagnetics code remotely. We analyze the scaling and cost benefits of using cloud computing for micromagnetics. - Highlights: • The benefits of cloud computing for GPU-accelerated micromagnetics are examined. • We present the MuCloud software for running simulations on cloud computing. • Simulation run times are measured to benchmark cloud computing performance. • Comparison benchmarks are analyzed between CPU and GPU based solvers.

Simulating autonomous driving styles: Accelerations for three road profiles

Directory of Open Access Journals (Sweden)

Karjanto Juffrizal

2017-01-01

Full Text Available This paper presents a new experimental approach to simulate projected autonomous driving styles based on the accelerations at three road profiles. This study was focused on the determination of ranges of accelerations in triaxial direction to simulate the autonomous driving experience. A special device, known as the Automatic Acceleration and Data controller (AUTOAccD, has been developed to guide the designated driver to accomplish the selected accelerations based on the road profiles and the intended driving styles namely assertive, defensive and light rail transit (LRT. Experimental investigations have been carried out at three different road profiles (junction, speed hump, and corner with two designated drivers with five trials on each condition. A driving style with the accelerations of LRT has also been included in this study as it is significant to the present methodology because the autonomous car is predicted to accelerate like an LRT, in such a way that it enables the users to conduct activities such as working on a laptop, using personal devices or eating and drinking while travelling. The results demonstrated that 92 out of 110 trials of the intended accelerations for autonomous driving styles could be achieved and simulated on the real road by the designated drivers. The differences between the two designated drivers were negligible, and the rates of succeeding in realizing the intended accelerations were high. The present approach in simulating autonomous driving styles focusing on accelerations can be used as a tool for experimental setup involving autonomous driving experience and acceptance.

An Accelerating Solution for N-Body MOND Simulation with FPGA-SoC

Directory of Open Access Journals (Sweden)

Bo Peng

2016-01-01

Full Text Available As a modified-gravity proposal to handle the dark matter problem on galactic scales, Modified Newtonian Dynamics (MOND has shown a great success. However, the N-body MOND simulation is quite challenged by its computation complexity, which appeals to acceleration of the simulation calculation. In this paper, we present a highly integrated accelerating solution for N-body MOND simulations. By using the FPGA-SoC, which integrates both FPGA and SoC (system on chip in one chip, our solution exhibits potentials for better performance, higher integration, and lower power consumption. To handle the calculation bottleneck of potential summation, on one hand, we develop a strategy to simplify the pipeline, in which the square calculation task is conducted by the DSP48E1 of Xilinx 7 series FPGAs, so as to reduce the logic resource utilization of each pipeline; on the other hand, advantages of particle-mesh scheme are taken to overcome the bottleneck on bandwidth. Our experiment results show that 2 more pipelines can be integrated in Zynq-7020 FPGA-SoC with the simplified pipeline, and the bandwidth requirement is reduced significantly. Furthermore, our accelerating solution has a full range of advantages over different processors. Compared with GPU, our work is about 10 times better in performance per watt and 50% better in performance per cost.

DEM simulation of granular flows in a centrifugal acceleration field

Science.gov (United States)

Cabrera, Miguel Angel; Peng, Chong; Wu, Wei

2017-04-01

The main purpose of mass-flow experimental models is abstracting distinctive features of natural granular flows, and allow its systematic study in the laboratory. In this process, particle size, space, time, and stress scales must be considered for the proper representation of specific phenomena [5]. One of the most challenging tasks in small scale models, is matching the range of stresses and strains among the particle and fluid media observed in a field event. Centrifuge modelling offers an alternative to upscale all gravity-driven processes, and it has been recently employed in the simulation of granular flows [1, 2, 3, 6, 7]. Centrifuge scaling principles are presented in Ref. [4], collecting a wide spectrum of static and dynamic models. However, for the case of kinematic processes, the non-uniformity of the centrifugal acceleration field plays a major role (i.e., Coriolis and inertial effects). In this work, we discuss a general formulation for the centrifugal acceleration field, implemented in a discrete element model framework (DEM), and validated with centrifuge experimental results. Conventional DEM simulations relate the volumetric forces as a function of the gravitational force Gp = mpg. However, in the local coordinate system of a rotating centrifuge model, the cylindrical centrifugal acceleration field needs to be included. In this rotating system, the centrifugal acceleration of a particle depends on the rotating speed of the centrifuge, as well as the position and speed of the particle in the rotating model. Therefore, we obtain the formulation of centrifugal acceleration field by coordinate transformation. The numerical model is validated with a series of centrifuge experiments of monodispersed glass beads, flowing down an inclined plane at different acceleration levels and slope angles. Further discussion leads to the numerical parameterization necessary for simulating equivalent granular flows under an augmented acceleration field. The premise of

Magnetic-Island Contraction and Particle Acceleration in Simulated Eruptive Solar Flares

Science.gov (United States)

Guidoni, S. E.; Devore, C. R.; Karpen, J. T.; Lynch, B. J.

2016-01-01

The mechanism that accelerates particles to the energies required to produce the observed high-energy impulsive emission in solar flares is not well understood. Drake et al. proposed a mechanism for accelerating electrons in contracting magnetic islands formed by kinetic reconnection in multi-layered current sheets (CSs). We apply these ideas to sunward-moving flux ropes (2.5D magnetic islands) formed during fast reconnection in a simulated eruptive flare. A simple analytic model is used to calculate the energy gain of particles orbiting the field lines of the contracting magnetic islands in our ultrahigh-resolution 2.5D numerical simulation. We find that the estimated energy gains in a single island range up to a factor of five. This is higher than that found by Drake et al. for islands in the terrestrial magnetosphere and at the heliopause, due to strong plasma compression that occurs at the flare CS. In order to increase their energy by two orders of magnitude and plausibly account for the observed high-energy flare emission, the electrons must visit multiple contracting islands. This mechanism should produce sporadic emission because island formation is intermittent. Moreover, a large number of particles could be accelerated in each magneto hydro dynamic-scale island, which may explain the inferred rates of energetic-electron production in flares. We conclude that island contraction in the flare CS is a promising candidate for electron acceleration in solar eruptions.

Increasing the power of accelerated molecular dynamics methods and plans to exploit the coming exascale

Science.gov (United States)

Voter, Arthur

Many important materials processes take place on time scales that far exceed the roughly one microsecond accessible to molecular dynamics simulation. Typically, this long-time evolution is characterized by a succession of thermally activated infrequent events involving defects in the material. In the accelerated molecular dynamics (AMD) methodology, known characteristics of infrequent-event systems are exploited to make reactive events take place more frequently, in a dynamically correct way. For certain processes, this approach has been remarkably successful, offering a view of complex dynamical evolution on time scales of microseconds, milliseconds, and sometimes beyond. We have recently made advances in all three of the basic AMD methods (hyperdynamics, parallel replica dynamics, and temperature accelerated dynamics (TAD)), exploiting both algorithmic advances and novel parallelization approaches. I will describe these advances, present some examples of our latest results, and discuss what should be possible when exascale computing arrives in roughly five years. Funded by the U.S. Department of Energy, Office of Basic Energy Sciences, Materials Sciences and Engineering Division, and by the Los Alamos Laboratory Directed Research and Development program.

Spin dynamics of electron beams in circular accelerators

International Nuclear Information System (INIS)

Boldt, Oliver

2014-04-01

Experiments using high energy beams of spin polarized, charged particles still prove to be very helpful in disclosing a deeper understanding of the fundamental structure of matter. An important aspect is to control the beam properties, such as brilliance, intensity, energy, and degree of spin polarization. In this context, the present studies show various numerical calculations of the spin dynamics of high energy electron beams in circular accelerators. Special attention has to be paid to the emission of synchrotron radiation, that occurs when deflecting charged particles on circular orbits. In the presence of the fluctuation of the kinetic energy due to the photon emission, each electron spin moves non-deterministically. This stochastic effect commonly slows down the speed of all numeric estimations. However, the shown simulations cover - using appropriate approximations - trackings for the motion of thousands of electron spins for up to thousands of turns. Those calculations are validated and complemented by empirical investigations at the electron stretcher facility ELSA of the University of Bonn. They can largely be extended to other boundary conditions and thus, can be consulted for new accelerator layouts.

Preliminary simulation studies of accelerator cavity loading

International Nuclear Information System (INIS)

Faehl, R.J.

1980-06-01

Two-dimensional simulations of loading effects in a 350 MHz accelerator cavity have been performed. Electron currents of 1-10 kA have been accelerated in 5 MV/m fields. Higher order cavity modes induced by the beam may lead to emittance growth. Operation in an autoaccelerator mode has been studied

Studies of beam dynamics in relativistic klystron two-beam accelerators

Energy Technology Data Exchange (ETDEWEB)

Lidia, Steven M.

1999-11-01

Two-beam accelerators (TBAs) based upon free-electron lasers (FELs) or relativistic klystrons (RK-TBAs) have been proposed as efficient power sources for next generation high-energy linear colliders. Studies have demonstrated the possibility of building TBAs from X-band (~8-12 GHz) through Ka band (~ 30-35 GHz) frequency regions. Provided that further prototyping shows stable beam propagation with minimal current loss and production of good quality, high-power rf fields, this technology is compatible with current schemes for electron-positron colliders in the multi-TeV center-of-mass scale. A new method of simulating the beam dynamics in accelerators of this type has been developed in this dissertation. There are three main components to this simulation. The first is a tracking algorithm to generate nonlinear transfer maps for pushing noninteracting particles through the external fields. The second component is a 3D Particle-In-Cell (PIC) algorithm that solves a set of Helmholtz equations for the self-fields, including the conducting boundary condition, and generates impulses that are interleaved with the nonlinear maps by means of a split-operation algorithm. The Helmholtz equations are solved by a multi-grid algorithm. The third component is an equivalent circuit equation solver that advances the modal rf cavity fields in time due to excitation by the modulated beam. The RTA project is described, and the simulation code is used to design the latter portions of the experiment. Detailed calculations of the beam dynamics and of the rf cavity output are presented and discussed. A beamline design is presented that will generate nearly 1.2 GW of power from 40 input, gain, and output rv cavities over a 10 m distance. The simulations show that beam current losses are acceptable, and that longitudinal and transverse focusing techniques are sufficient capable of maintaining a high degree of beam quality along the entire beamline. Additional experimental efforts are also

Accelerating transition dynamics in city regions: A qualitative modeling perspective

NARCIS (Netherlands)

P.J. Valkering (Pieter); Yücel, G. (Gönenç); Gebetsroither-Geringer, E. (Ernst); Markvica, K. (Karin); Meynaerts, E. (Erika); N. Frantzeskaki (Niki)

2017-01-01

textabstractIn this article, we take stock of the findings from conceptual and empirical work on the role of transition initiatives for accelerating transitions as input for modeling acceleration dynamics. We applied the qualitative modeling approach of causal loop diagrams to capture the dynamics

Accelerated sampling by infinite swapping of path integral molecular dynamics with surface hopping

Science.gov (United States)

Lu, Jianfeng; Zhou, Zhennan

2018-02-01

To accelerate the thermal equilibrium sampling of multi-level quantum systems, the infinite swapping limit of a recently proposed multi-level ring polymer representation is investigated. In the infinite swapping limit, the ring polymer evolves according to an averaged Hamiltonian with respect to all possible surface index configurations of the ring polymer and thus connects the surface hopping approach to the mean-field path-integral molecular dynamics. A multiscale integrator for the infinite swapping limit is also proposed to enable efficient sampling based on the limiting dynamics. Numerical results demonstrate the huge improvement of sampling efficiency of the infinite swapping compared with the direct simulation of path-integral molecular dynamics with surface hopping.

Inspection of piping wall loss with flow accelerated corrosion accelerated simulation test

International Nuclear Information System (INIS)

Ryu, Kyung Ha; Kim, Ji Hak; Hwang, Il Soon; Lee, Na Young; Kim, Ji Hyun

2009-01-01

Flow Accelerated Corrosion (FAC) has become a hot issue for aging of passive components. Ultrasonic Technique (UT) has been adopted to inspect the secondary piping of Nuclear Power Plants (NPPs). UT, however, uses point detection method, which results in numerous detecting points and thus takes time. We developed an Equipotential Switching Direct Current Potential Drop (ES-DCPD) method to monitor the thickness of piping that covers wide range of piping at once time. Since the ES-DCPD method covers area, not a point, it needs less monitoring time. This can be a good approach to broad carbon steel piping system such as secondary piping of NPPs. In this paper, FAC accelerated simulation test results is described. We realized accelerated FAC phenomenon by 2 times test: 23.7% thinning in 216.7 hours and 51% thinning in 795 hours. These were monitored by ES-DCPD and traditional UT. Some parameters of water chemistry are monitored and controlled to accelerate FAC process. As sensitive factors on FAC, temperature and pH was changed during the test. The wall loss monitored results reflected these changes of water chemistry successfully. Developed electrodes are also applied to simulation loop to monitor water chemistry. (author)

Radiation pressure acceleration of ultrathin foils

Energy Technology Data Exchange (ETDEWEB)

Macchi, Andrea; Veghini, Silvia; Pegoraro, Francesco [Department of Physics ' E. Fermi' , Largo B Pontecorvo 3, 56127 Pisa (Italy); Liseykina, Tatyana V, E-mail: macchi@df.unipi.i [Max Planck Institute for Nuclear Physics, Heidelberg (Germany)

2010-04-15

The acceleration of sub-wavelength, solid-density plasma foils by the ultraintense radiation pressure of circularly polarized laser pulses is investigated analytically and with simulations. An improved 'Light Sail' or accelerating mirror model, accounting for nonlinear self-induced transparency effects, is used for estimating the optimal thickness for acceleration. The model predictions are in good agreement with one-dimensional simulations. These latter are analyzed in detail to unfold the dynamics and self-organization of electrons and ions during the acceleration. Two-dimensional simulations are also performed to address the effects of target bending and of laser intensity inhomogeneity.

Interactive Dynamic-System Simulation

CERN Document Server

Korn, Granino A

2010-01-01

Showing you how to use personal computers for modeling and simulation, Interactive Dynamic-System Simulation, Second Edition provides a practical tutorial on interactive dynamic-system modeling and simulation. It discusses how to effectively simulate dynamical systems, such as aerospace vehicles, power plants, chemical processes, control systems, and physiological systems. Written by a pioneer in simulation, the book introduces dynamic-system models and explains how software for solving differential equations works. After demonstrating real simulation programs with simple examples, the author

Improved scaling of temperature-accelerated dynamics using localization

Energy Technology Data Exchange (ETDEWEB)

Shim, Yunsic; Amar, Jacques G. [Department of Physics and Astronomy, University of Toledo, Toledo, Ohio 43606 (United States)

2016-07-07

While temperature-accelerated dynamics (TAD) is a powerful method for carrying out non-equilibrium simulations of systems over extended time scales, the computational cost of serial TAD increases approximately as N{sup 3} where N is the number of atoms. In addition, although a parallel TAD method based on domain decomposition [Y. Shim et al., Phys. Rev. B 76, 205439 (2007)] has been shown to provide significantly improved scaling, the dynamics in such an approach is only approximate while the size of activated events is limited by the spatial decomposition size. Accordingly, it is of interest to develop methods to improve the scaling of serial TAD. As a first step in understanding the factors which determine the scaling behavior, we first present results for the overall scaling of serial TAD and its components, which were obtained from simulations of Ag/Ag(100) growth and Ag/Ag(100) annealing, and compare with theoretical predictions. We then discuss two methods based on localization which may be used to address two of the primary “bottlenecks” to the scaling of serial TAD with system size. By implementing both of these methods, we find that for intermediate system-sizes, the scaling is improved by almost a factor of N{sup 1/2}. Some additional possible methods to improve the scaling of TAD are also discussed.

Improved scaling of temperature-accelerated dynamics using localization

International Nuclear Information System (INIS)

Shim, Yunsic; Amar, Jacques G.

2016-01-01

While temperature-accelerated dynamics (TAD) is a powerful method for carrying out non-equilibrium simulations of systems over extended time scales, the computational cost of serial TAD increases approximately as N 3 where N is the number of atoms. In addition, although a parallel TAD method based on domain decomposition [Y. Shim et al., Phys. Rev. B 76, 205439 (2007)] has been shown to provide significantly improved scaling, the dynamics in such an approach is only approximate while the size of activated events is limited by the spatial decomposition size. Accordingly, it is of interest to develop methods to improve the scaling of serial TAD. As a first step in understanding the factors which determine the scaling behavior, we first present results for the overall scaling of serial TAD and its components, which were obtained from simulations of Ag/Ag(100) growth and Ag/Ag(100) annealing, and compare with theoretical predictions. We then discuss two methods based on localization which may be used to address two of the primary “bottlenecks” to the scaling of serial TAD with system size. By implementing both of these methods, we find that for intermediate system-sizes, the scaling is improved by almost a factor of N 1/2 . Some additional possible methods to improve the scaling of TAD are also discussed.

Dynamic Simulation Research on Chain Drive Mechanism of Corn Seeder Based on ADAMS

Science.gov (United States)

Wang, Y. B.; Jia, H. P.

2017-12-01

In order to reduce the damage to the chain and improve the seeding quality of the seeding machine, the corn seeder has the characteristics of the seeding quality and some technical indexes in the work of the corn seeding machine. The dynamic analysis of the chain drive mechanism is carried out by using the dynamic virtual prototype. In this paper, the speed of the corn planter is 5km/h, and the speed of the simulated knuckle is 0.1~0.9s. The velocity is 0.12m/s, which is equal to the chain speed when the seeder is running normally. Of the dynamic simulation of the movement and the actual situation is basically consistent with the apparent speed of the drive wheel has changed the acceleration and additional dynamic load, the chain drive has a very serious damage, and the maximum load value of 47.28N, in order to reduce the damage to the chain, As far as possible so that the sowing machine in the work to maintain a reasonable uniform speed, to avoid a greater acceleration, the corn sowing machine drive the design of a certain reference.

Design & simulation of a 800 kV dynamitron accelerator by CST studio

Directory of Open Access Journals (Sweden)

A M Aghayan

2015-09-01

Full Text Available Nowadays, middle energy electrostatic accelerators in industries are widely used due to their high efficiency and low cost compared with other types of accelerators. In this paper, the importance and applications of electrostatic accelerators with 800 keV energy are studied. Design and simulation of capacitive coupling of a dynamitron accelerator is proposed. Furthermore, accelerating tube are designed and simulated by means of CST Suit Studio

Simulation of accelerator transmutation of long-lived nuclear wastes

International Nuclear Information System (INIS)

Wolff-Bacha Fabienne

1997-01-01

The incineration of minor actinides with a hybrid reactor (i.e. coupled with an accelerator) could reduce their radioactivity. The scientific tool used for simulations, the GEANT code implemented on a paralleled computer, has been confirmed initially on thin and thick targets and by simulation of a pressurized water reactor, a fast reactor like Superphenix, and a molten salt fast hybrid reactor 'ATP'. Simulating a thermal hybrid reactor seems to indicate the non-negligible presence of neutrons which diffuse back to the accelerator. In spite of simplifications, the simulation of a molten lead fast hybrid reactor (as the CERN Fast Energy Amplifier) might indicate difficulties in the radial power distribution in the core, the life time of the window and the activated air leak risk. Finally, we propose a thermoelectric compact hybrid reactor, PRAHE - small atomic board hybrid reactor - the principle of which allows a neutron coupling between the accelerator and the reactor. (author)

GPU accelerated Discrete Element Method (DEM) molecular dynamics for conservative, faceted particle simulations

Energy Technology Data Exchange (ETDEWEB)

Spellings, Matthew [Chemical Engineering, University of Michigan, 2800 Plymouth Rd., Ann Arbor, MI 48109 (United States); Biointerfaces Institute, University of Michigan, 2800 Plymouth Rd., Ann Arbor, MI 48109 (United States); Marson, Ryan L. [Materials Science & Engineering, University of Michigan, 2300 Hayward St., Ann Arbor, MI 48109 (United States); Biointerfaces Institute, University of Michigan, 2800 Plymouth Rd., Ann Arbor, MI 48109 (United States); Anderson, Joshua A. [Chemical Engineering, University of Michigan, 2800 Plymouth Rd., Ann Arbor, MI 48109 (United States); Biointerfaces Institute, University of Michigan, 2800 Plymouth Rd., Ann Arbor, MI 48109 (United States); Glotzer, Sharon C., E-mail: sglotzer@umich.edu [Chemical Engineering, University of Michigan, 2800 Plymouth Rd., Ann Arbor, MI 48109 (United States); Materials Science & Engineering, University of Michigan, 2300 Hayward St., Ann Arbor, MI 48109 (United States); Biointerfaces Institute, University of Michigan, 2800 Plymouth Rd., Ann Arbor, MI 48109 (United States)

2017-04-01

Faceted shapes, such as polyhedra, are commonly found in systems of nanoscale, colloidal, and granular particles. Many interesting physical phenomena, like crystal nucleation and growth, vacancy motion, and glassy dynamics are challenging to model in these systems because they require detailed dynamical information at the individual particle level. Within the granular materials community the Discrete Element Method has been used extensively to model systems of anisotropic particles under gravity, with friction. We provide an implementation of this method intended for simulation of hard, faceted nanoparticles, with a conservative Weeks–Chandler–Andersen (WCA) interparticle potential, coupled to a thermodynamic ensemble. This method is a natural extension of classical molecular dynamics and enables rigorous thermodynamic calculations for faceted particles.

Computer simulations of compact toroid formation and acceleration

International Nuclear Information System (INIS)

Peterkin, R.E. Jr.; Sovinec, C.R.

1990-01-01

Experiments to form, accelerate, and focus compact toroid plasmas will be performed on the 9.4 MJ SHIVA STAR fast capacitor bank at the Air Force Weapons Laboratory during the 1990. The MARAUDER (magnetically accelerated rings to achieve ultrahigh directed energy and radiation) program is a research effort to accelerate magnetized plasma rings with the masses between 0.1 and 1.0 mg to velocities above 10 8 cm/sec and energies above 1 MJ. Research on these high-velocity compact toroids may lead to development of very fast opening switches, high-power microwave sources, and an alternative path to inertial confinement fusion. Design of a compact toroid accelerator experiment on the SHIVA STAR capacitor bank is underway, and computer simulations with the 2 1/2-dimensional magnetohydrodynamics code, MACH2, have been performed to guide this endeavor. The compact toroids are produced in a magnetized coaxial plasma gun, and the acceleration will occur in a configuration similar to a coaxial railgun. Detailed calculations of formation and equilibration of a low beta magnetic force-free configuration (curl B = kB) have been performed with MACH2. In this paper, the authors discuss computer simulations of the focusing and acceleration of the toroid

A GPU Accelerated Spring Mass System for Surgical Simulation

DEFF Research Database (Denmark)

Mosegaard, Jesper; Sørensen, Thomas Sangild

2005-01-01

There is a growing demand for surgical simulators to dofast and precise calculations of tissue deformation to simulateincreasingly complex morphology in real-time. Unfortunately, evenfast spring-mass based systems have slow convergence rates for largemodels. This paper presents a method to accele...... to accelerate computation of aspring-mass system in order to simulate a complex organ such as theheart. This acceleration is achieved by taking advantage of moderngraphics processing units (GPU)....

Design and simulation of an accelerating and focusing system

Directory of Open Access Journals (Sweden)

A Sadeghipanah

2011-06-01

Full Text Available Electrostatic focusing lenses have a vast field of applications in electrostatic accelerators and particularly in electron guns. In this paper, we first express a parametric mathematical analysis of an electrostatic accelerator and focusing system for an electron beam. Next, we At design a system of electron emission slit, accelerating electrodes and focusing lens for an electron beam emitted from a cathode with 4 mm radius and 2 mA current, in a distance less than 10 cm and up to the energy of 30 keV with the beam divergence less than 5°. This is achieved by solving the yielded equations in mathematical analysis using MATLAB. At the end, we simulate the behavior of above electron beam in the designed accelerating and focusing system using CST EM Studio. The results of simulation are in high agreement with required specifications of the electron beam, showing the accuracy of the used method in analysis and design of the accelerating and focusing system.

Particle acceleration in regions of magnetic flux emergence: a statistical approach using test-particle- and MHD-simulations

Science.gov (United States)

Vlahos, Loukas; Archontis, Vasilis; Isliker, Heinz

We consider 3D nonlinear MHD simulations of an emerging flux tube, from the convection zone into the corona, focusing on the coronal part of the simulations. We first analyze the statistical nature and spatial structure of the electric field, calculating histograms and making use of iso-contour visualizations. Then test-particle simulations are performed for electrons, in order to study heating and acceleration phenomena, as well as to determine HXR emission. This study is done by comparatively exploring quiet, turbulent explosive, and mildly explosive phases of the MHD simulations. Also, the importance of collisional and relativistic effects is assessed, and the role of the integration time is investigated. Particular aim of this project is to verify the quasi- linear assumptions made in standard transport models, and to identify possible transport effects that cannot be captured with the latter. In order to determine the relation of our results to Fermi acceleration and Fokker-Planck modeling, we determine the standard transport coefficients. After all, we find that the electric field of the MHD simulations must be downscaled in order to prevent an un-physically high degree of acceleration, and the value chosen for the scale factor strongly affects the results. In different MHD time-instances we find heating to take place, and acceleration that depends on the level of MHD turbulence. Also, acceleration appears to be a transient phenomenon, there is a kind of saturation effect, and the parallel dynamics clearly dominate the energetics. The HXR spectra are not yet really compatible with observations, we have though to further explore the scaling of the electric field and the integration times used.

Replica Exchange Gaussian Accelerated Molecular Dynamics: Improved Enhanced Sampling and Free Energy Calculation.

Science.gov (United States)

Huang, Yu-Ming M; McCammon, J Andrew; Miao, Yinglong

2018-04-10

Through adding a harmonic boost potential to smooth the system potential energy surface, Gaussian accelerated molecular dynamics (GaMD) provides enhanced sampling and free energy calculation of biomolecules without the need of predefined reaction coordinates. This work continues to improve the acceleration power and energy reweighting of the GaMD by combining the GaMD with replica exchange algorithms. Two versions of replica exchange GaMD (rex-GaMD) are presented: force constant rex-GaMD and threshold energy rex-GaMD. During simulations of force constant rex-GaMD, the boost potential can be exchanged between replicas of different harmonic force constants with fixed threshold energy. However, the algorithm of threshold energy rex-GaMD tends to switch the threshold energy between lower and upper bounds for generating different levels of boost potential. Testing simulations on three model systems, including the alanine dipeptide, chignolin, and HIV protease, demonstrate that through continuous exchanges of the boost potential, the rex-GaMD simulations not only enhance the conformational transitions of the systems but also narrow down the distribution width of the applied boost potential for accurate energetic reweighting to recover biomolecular free energy profiles.

Fourier analysis of Solar atmospheric numerical simulations accelerated with GPUs (CUDA).

Science.gov (United States)

Marur, A.

2015-12-01

Solar dynamics from the convection zone creates a variety of waves that may propagate through the solar atmosphere. These waves are important in facilitating the energy transfer between the sun's surface and the corona as well as propagating energy throughout the solar system. How and where these waves are dissipated remains an open question. Advanced 3D numerical simulations have furthered our understanding of the processes involved. Fourier transforms to understand the nature of the waves by finding the frequency and wavelength of these waves through the simulated atmosphere, as well as the nature of their propagation and where they get dissipated. In order to analyze the different waves produced by the aforementioned simulations and models, Fast Fourier Transform algorithms will be applied. Since the processing of the multitude of different layers of the simulations (of the order of several 100^3 grid points) would be time intensive and inefficient on a CPU, CUDA, a computing architecture that harnesses the power of the GPU, will be used to accelerate the calculations.

Anomalous scaling of structure functions and dynamic constraints on turbulence simulations

International Nuclear Information System (INIS)

Yakhot, Victor; Sreenivasan, Katepalli R.

2006-12-01

The connection between anomalous scaling of structure functions (intermittency) and numerical methods for turbulence simulations is discussed. It is argued that the computational work for direct numerical simulations (DNS) of fully developed turbulence increases as Re 4 , and not as Re 3 expected from Kolmogorov's theory, where Re is a large-scale Reynolds number. Various relations for the moments of acceleration and velocity derivatives are derived. An infinite set of exact constraints on dynamically consistent subgrid models for Large Eddy Simulations (LES) is derived from the Navier-Stokes equations, and some problems of principle associated with existing LES models are highlighted. (author)

Real and financial market interactions in a multiplier-accelerator model: Nonlinear dynamics, multistability and stylized facts

Science.gov (United States)

Cavalli, F.; Naimzada, A.; Pecora, N.

2017-10-01

In the present paper, we investigate the dynamics of a model in which the real part of the economy, described within a multiplier-accelerator framework, interacts with a financial market with heterogeneous speculators, in order to study the channels through which the two sectors influence each other. Employing analytical and numerical tools, we investigate stability conditions as well as bifurcations and possible periodic, quasi-periodic, and chaotic dynamics, enlightening how the degree of market interaction, together with the accelerator parameter and the intervention of the fiscal authority, may affect the business cycle and the course of the financial market. In particular, we show that even if the steady state is locally stable, multistability phenomena can occur, with several and complex dynamic structures coexisting with the steady state. Finally, simulations reveal that the proposed model is able to explain several statistical properties and stylized facts observed in real financial markets, including persistent high volatility, fat-tailed return distributions, volatility clustering, and positive autocorrelation of absolute returns.

Advanced Simulation and Optimization Tools for Dynamic Aperture of Non-scaling FFAGs and Accelerators including Modern User Interfaces

International Nuclear Information System (INIS)

Mills, F.; Makino, K.; Berz, M.; Johnstone, C.

2010-01-01

With the U.S. experimental effort in HEP largely located at laboratories supporting the operations of large, highly specialized accelerators, colliding beam facilities, and detector facilities, the understanding and prediction of high energy particle accelerators becomes critical to the success, overall, of the DOE HEP program. One area in which small businesses can contribute to the ongoing success of the U.S. program in HEP is through innovations in computer techniques and sophistication in the modeling of high-energy accelerators. Accelerator modeling at these facilities is performed by experts with the product generally highly specific and representative only of in-house accelerators or special-interest accelerator problems. Development of new types of accelerators like FFAGs with their wide choices of parameter modifications, complicated fields, and the simultaneous need to efficiently handle very large emittance beams requires the availability of new simulation environments to assure predictability in operation. In this, ease of use and interfaces are critical to realizing a successful model, or optimization of a new design or working parameters of machines. In Phase I, various core modules for the design and analysis of FFAGs were developed and Graphical User Interfaces (GUI) have been investigated instead of the more general yet less easily manageable console-type output COSY provides.

Advanced Simulation and Optimization Tools for Dynamic Aperture of Non-scaling FFAGs and Accelerators including Modern User Interfaces

Energy Technology Data Exchange (ETDEWEB)

Mills, F.; Makino, Kyoko; Berz, Martin; Johnstone, C.

2010-09-01

With the U.S. experimental effort in HEP largely located at laboratories supporting the operations of large, highly specialized accelerators, colliding beam facilities, and detector facilities, the understanding and prediction of high energy particle accelerators becomes critical to the success, overall, of the DOE HEP program. One area in which small businesses can contribute to the ongoing success of the U.S. program in HEP is through innovations in computer techniques and sophistication in the modeling of high-energy accelerators. Accelerator modeling at these facilities is performed by experts with the product generally highly specific and representative only of in-house accelerators or special-interest accelerator problems. Development of new types of accelerators like FFAGs with their wide choices of parameter modifications, complicated fields, and the simultaneous need to efficiently handle very large emittance beams requires the availability of new simulation environments to assure predictability in operation. In this, ease of use and interfaces are critical to realizing a successful model, or optimization of a new design or working parameters of machines. In Phase I, various core modules for the design and analysis of FFAGs were developed and Graphical User Interfaces (GUI) have been investigated instead of the more general yet less easily manageable console-type output COSY provides.

Enhanced Sampling in Molecular Dynamics Using Metadynamics, Replica-Exchange, and Temperature-Acceleration

Directory of Open Access Journals (Sweden)

Cameron Abrams

2013-12-01

Full Text Available We review a selection of methods for performing enhanced sampling in molecular dynamics simulations. We consider methods based on collective variable biasing and on tempering, and offer both historical and contemporary perspectives. In collective-variable biasing, we first discuss methods stemming from thermodynamic integration that use mean force biasing, including the adaptive biasing force algorithm and temperature acceleration. We then turn to methods that use bias potentials, including umbrella sampling and metadynamics. We next consider parallel tempering and replica-exchange methods. We conclude with a brief presentation of some combination methods.

Laser acceleration and nonlinear beam dynamics

International Nuclear Information System (INIS)

Pellegrini, C.

1991-01-01

This research contract covers the period April 1990, September 1991. The work to be done under the contract was theoretical research in the areas of nonlinear beam dynamics and laser acceleration. In this final report we will discuss the motivation for this work and the results obtained

Efficiency optimization of a fast Poisson solver in beam dynamics simulation

Science.gov (United States)

Zheng, Dawei; Pöplau, Gisela; van Rienen, Ursula

2016-01-01

Calculating the solution of Poisson's equation relating to space charge force is still the major time consumption in beam dynamics simulations and calls for further improvement. In this paper, we summarize a classical fast Poisson solver in beam dynamics simulations: the integrated Green's function method. We introduce three optimization steps of the classical Poisson solver routine: using the reduced integrated Green's function instead of the integrated Green's function; using the discrete cosine transform instead of discrete Fourier transform for the Green's function; using a novel fast convolution routine instead of an explicitly zero-padded convolution. The new Poisson solver routine preserves the advantages of fast computation and high accuracy. This provides a fast routine for high performance calculation of the space charge effect in accelerators.

Photon acceleration in laser wakefield accelerators

International Nuclear Information System (INIS)

Trines, R. M. G. M.

2007-01-01

If the index of a refraction of a dispersive medium, such as a plasma, changes in time, it can be used to change the frequency of light propagating through the medium. This effect is called photon acceleration. It has been predicted in both theory and simulations, and also been demonstrated experimentally for the case of moving ionization fronts in gases (the so-called ionization blueshift) as well as for laser-driven wakefields.Here, we present studies of photon acceleration in laser-driven plasma wakefields. The unique spectral characteristics of this process will be discussed, to distinguish it from e.g. photon acceleration by ionization fronts, frequency domain interferometry or self-phase modulation. The dynamics of the photons in laser-wakefield interaction are studied through both regular particle-in-cell and wave-kinetic simulations. The latter approach provides a powerful, versatile, and easy-to-use method to track the propagation of individual spectral components, providing new insight into the physics of laser-plasma interaction. Theory, simulations and experimental results will be brought together to provide a full understanding of the dynamics of a laser pulse in its own wakefield.Even though the wave-kinetic approach mentioned above has mainly been developed for the description of laser-plasma interaction, it can be applied to a much wider range of fast wave-slow wave interaction processes: Langmuir waves-ion acoustic waves, drift waves-zonal flow, Rossby waves-zonal flow, or even photons-gravitational waves. Several recent results in these areas will be shown, often with surprising results

Availability simulation software adaptation to the IFMIF accelerator facility RAMI analyses

Energy Technology Data Exchange (ETDEWEB)

Bargalló, Enric, E-mail: enric.bargallo-font@upc.edu [Fusion Energy Engineering Laboratory (FEEL), Technical University of Catalonia (UPC) Barcelona-Tech, Barcelona (Spain); Sureda, Pere Joan [Fusion Energy Engineering Laboratory (FEEL), Technical University of Catalonia (UPC) Barcelona-Tech, Barcelona (Spain); Arroyo, Jose Manuel [Laboratorio Nacional de Fusión por Confinamiento Magnético – CIEMAT, Madrid (Spain); Abal, Javier; De Blas, Alfredo; Dies, Javier; Tapia, Carlos [Fusion Energy Engineering Laboratory (FEEL), Technical University of Catalonia (UPC) Barcelona-Tech, Barcelona (Spain); Mollá, Joaquín; Ibarra, Ángel [Laboratorio Nacional de Fusión por Confinamiento Magnético – CIEMAT, Madrid (Spain)

2014-10-15

Highlights: • The reason why IFMIF RAMI analyses needs a simulation is explained. • Changes, modifications and software validations done to AvailSim are described. • First IFMIF RAMI results obtained with AvailSim 2.0 are shown. • Implications of AvailSim 2.0 in IFMIF RAMI analyses are evaluated. - Abstract: Several problems were found when using generic reliability tools to perform RAMI (Reliability Availability Maintainability Inspectability) studies for the IFMIF (International Fusion Materials Irradiation Facility) accelerator. A dedicated simulation tool was necessary to model properly the complexity of the accelerator facility. AvailSim, the availability simulation software used for the International Linear Collider (ILC) became an excellent option to fulfill RAMI analyses needs. Nevertheless, this software needed to be adapted and modified to simulate the IFMIF accelerator facility in a useful way for the RAMI analyses in the current design phase. Furthermore, some improvements and new features have been added to the software. This software has become a great tool to simulate the peculiarities of the IFMIF accelerator facility allowing obtaining a realistic availability simulation. Degraded operation simulation and maintenance strategies are the main relevant features. In this paper, the necessity of this software, main modifications to improve it and its adaptation to IFMIF RAMI analysis are described. Moreover, first results obtained with AvailSim 2.0 and a comparison with previous results is shown.

Availability simulation software adaptation to the IFMIF accelerator facility RAMI analyses

International Nuclear Information System (INIS)

Bargalló, Enric; Sureda, Pere Joan; Arroyo, Jose Manuel; Abal, Javier; De Blas, Alfredo; Dies, Javier; Tapia, Carlos; Mollá, Joaquín; Ibarra, Ángel

2014-01-01

Highlights: • The reason why IFMIF RAMI analyses needs a simulation is explained. • Changes, modifications and software validations done to AvailSim are described. • First IFMIF RAMI results obtained with AvailSim 2.0 are shown. • Implications of AvailSim 2.0 in IFMIF RAMI analyses are evaluated. - Abstract: Several problems were found when using generic reliability tools to perform RAMI (Reliability Availability Maintainability Inspectability) studies for the IFMIF (International Fusion Materials Irradiation Facility) accelerator. A dedicated simulation tool was necessary to model properly the complexity of the accelerator facility. AvailSim, the availability simulation software used for the International Linear Collider (ILC) became an excellent option to fulfill RAMI analyses needs. Nevertheless, this software needed to be adapted and modified to simulate the IFMIF accelerator facility in a useful way for the RAMI analyses in the current design phase. Furthermore, some improvements and new features have been added to the software. This software has become a great tool to simulate the peculiarities of the IFMIF accelerator facility allowing obtaining a realistic availability simulation. Degraded operation simulation and maintenance strategies are the main relevant features. In this paper, the necessity of this software, main modifications to improve it and its adaptation to IFMIF RAMI analysis are described. Moreover, first results obtained with AvailSim 2.0 and a comparison with previous results is shown

Particle beam dynamics simulations using the POOMA framework

International Nuclear Information System (INIS)

Humphrey, W.; Ryne, R.; Cleland, T.; Cummings, J.; Habib, S.; Mark, G.; Ji Qiang

1998-01-01

A program for simulation of the dynamics of high intensity charged particle beams in linear particle accelerators has been developed in C++ using the POOMA Framework, for use on serial and parallel architectures. The code models the trajectories of charged particles through a sequence of different accelerator beamline elements such as drift chambers, quadrupole magnets, or RF cavities. An FFT-based particle-in-cell algorithm is used to solve the Poisson equation that models the Coulomb interactions of the particles. The code employs an object-oriented design with software abstractions for the particle beam, accelerator beamline, and beamline elements, using C++ templates to efficiently support both 2D and 3D capabilities in the same code base. The POOMA Framework, which encapsulates much of the effort required for parallel execution, provides particle and field classes, particle-field interaction capabilities, and parallel FFT algorithms. The performance of this application running serially and in parallel is compared to an existing HPF implementation, with the POOMA version seen to run four times faster than the HPF code

Simulating electron clouds in heavy-ion accelerators

International Nuclear Information System (INIS)

Cohen, R.H.; Friedman, A.; Covo, M. Kireeff; Lund, S.M.; Molvik, A.W.; Bieniosek, F.M.; Seidl, P.A.; Vay, J.-L.; Stoltz, P.; Veitzer, S.

2005-01-01

Contaminating clouds of electrons are a concern for most accelerators of positively charged particles, but there are some unique aspects of heavy-ion accelerators for fusion and high-energy density physics which make modeling such clouds especially challenging. In particular, self-consistent electron and ion simulation is required, including a particle advance scheme which can follow electrons in regions where electrons are strongly magnetized, weakly magnetized, and unmagnetized. The approach to such self-consistency is described, and in particular a scheme for interpolating between full-orbit (Boris) and drift-kinetic particle pushes that enables electron time steps long compared to the typical gyroperiod in the magnets. Tests and applications are presented: simulation of electron clouds produced by three different kinds of sources indicates the sensitivity of the cloud shape to the nature of the source; first-of-a-kind self-consistent simulation of electron-cloud experiments on the high-current experiment [L. R. Prost, P. A. Seidl, F. M. Bieniosek, C. M. Celata, A. Faltens, D. Baca, E. Henestroza, J. W. Kwan, M. Leitner, W. L. Waldron, R. Cohen, A. Friedman, D. Grote, S. M. Lund, A. W. Molvik, and E. Morse, 'High current transport experiment for heavy ion inertial fusion', Physical Review Special Topics, Accelerators and Beams 8, 020101 (2005)], at Lawrence Berkeley National Laboratory, in which the machine can be flooded with electrons released by impact of the ion beam on an end plate, demonstrate the ability to reproduce key features of the ion-beam phase space; and simulation of a two-stream instability of thin beams in a magnetic field demonstrates the ability of the large-time-step mover to accurately calculate the instability

Temporal acceleration of spatially distributed kinetic Monte Carlo simulations

International Nuclear Information System (INIS)

Chatterjee, Abhijit; Vlachos, Dionisios G.

2006-01-01

The computational intensity of kinetic Monte Carlo (KMC) simulation is a major impediment in simulating large length and time scales. In recent work, an approximate method for KMC simulation of spatially uniform systems, termed the binomial τ-leap method, was introduced [A. Chatterjee, D.G. Vlachos, M.A. Katsoulakis, Binomial distribution based τ-leap accelerated stochastic simulation, J. Chem. Phys. 122 (2005) 024112], where molecular bundles instead of individual processes are executed over coarse-grained time increments. This temporal coarse-graining can lead to significant computational savings but its generalization to spatially lattice KMC simulation has not been realized yet. Here we extend the binomial τ-leap method to lattice KMC simulations by combining it with spatially adaptive coarse-graining. Absolute stability and computational speed-up analyses for spatial systems along with simulations provide insights into the conditions where accuracy and substantial acceleration of the new spatio-temporal coarse-graining method are ensured. Model systems demonstrate that the r-time increment criterion of Chatterjee et al. obeys the absolute stability limit for values of r up to near 1

Beam dynamics simulation of the S-DALINAC injector section

Energy Technology Data Exchange (ETDEWEB)

Franke, Sylvain; Ackermann, Wolfgang; Weiland, Thomas [Institut fuer Theorie Elektromagnetischer Felder, Technische Universitaet Darmstadt, Darmstadt (Germany)

2013-07-01

In order to extend the experimental possibilities at the superconducting electron linear accelerator S-DALINAC a new polarized gun has recently been installed in addition to the well-established thermionic electron source. Beside the two electron sources the injector section consists of several short quadrupole triplets, an alpha magnet, a Wien filter and a chopper/prebuncher system. The setup of these components differs depending on whether bunched polarized electrons with kinetic energy in the 100 keV range are supplied by the polarized source or whether a continuous unpolarized 250 keV electron beam is extracted from the thermionic gun. The electrons pass through the injector at a relatively low energy and therefore are very sensitive to the beam forming elements in this section. Thus, a proper knowledge of the particle distribution at the exit of the injector section is essential for the quality of any simulation of the subsequent accelerator parts. In this contribution first numerical beam dynamics simulation results of the S-DALINAC injector setup are discussed.

linear accelerator simulation framework with placet and guinea-pig

CERN Document Server

Snuverink, Jochem; CERN. Geneva. ATS Department

2016-01-01

Many good tracking tools are available for simulations for linear accelerators. However, several simple tasks need to be performed repeatedly, like lattice definitions, beam setup, output storage, etc. In addition, complex simulations can become unmanageable quite easily. A high level layer would therefore be beneficial. We propose LinSim, a linear accelerator framework with the codes PLACET and GUINEA-PIG. It provides a documented well-debugged high level layer of functionality. Users only need to provide the input settings and essential code and / or use some of the many implemented imperfections and algorithms. It can be especially useful for first-time users. Currently the following accelerators are implemented: ATF2, ILC, CLIC and FACET. This note is the comprehensive manual, discusses the framework design and shows its strength in some condensed examples.

Dynamical electron diffraction simulation for non-orthogonal crystal system by a revised real space method.

Science.gov (United States)

Lv, C L; Liu, Q B; Cai, C Y; Huang, J; Zhou, G W; Wang, Y G

2015-01-01

In the transmission electron microscopy, a revised real space (RRS) method has been confirmed to be a more accurate dynamical electron diffraction simulation method for low-energy electron diffraction than the conventional multislice method (CMS). However, the RRS method can be only used to calculate the dynamical electron diffraction of orthogonal crystal system. In this work, the expression of the RRS method for non-orthogonal crystal system is derived. By taking Na2 Ti3 O7 and Si as examples, the correctness of the derived RRS formula for non-orthogonal crystal system is confirmed by testing the coincidence of numerical results of both sides of Schrödinger equation; moreover, the difference between the RRS method and the CMS for non-orthogonal crystal system is compared at the accelerating voltage range from 40 to 10 kV. Our results show that the CMS method is almost the same as the RRS method for the accelerating voltage above 40 kV. However, when the accelerating voltage is further lowered to 20 kV or below, the CMS method introduces significant errors, not only for the higher-order Laue zone diffractions, but also for zero-order Laue zone. These indicate that the RRS method for non-orthogonal crystal system is necessary to be used for more accurate dynamical simulation when the accelerating voltage is low. Furthermore, the reason for the increase of differences between those diffraction patterns calculated by the RRS method and the CMS method with the decrease of the accelerating voltage is discussed. © 2015 The Authors Journal of Microscopy © 2015 Royal Microscopical Society.

Laser dynamics in transversely inhomogeneous plasma and its relevance to wakefield acceleration

Science.gov (United States)

Pathak, V. B.; Vieira, J.; Silva, L. O.; Nam, Chang Hee

2018-05-01

We present full set of coupled equations describing the weakly relativistic dynamics of a laser in a plasma with transverse inhomogeneity. We apply variational principle approach to obtain these coupled equations governing laser spot-size, transverse wavenumber, curvature, transverse centroid, etc. We observe that such plasma inhomogeneity can lead to stronger self-focusing. We further discuss the guiding conditions of laser in parabolic plasma channels. With the help of multi-dimensional particle in cell simulations the study is extended to the blowout regime of laser wakefield acceleration to show laser as well as self-injected electron bunch steering in plasma to generate unconventional particle trajectories. Our simulation results demonstrate that such transverse inhomogeneities due to asymmetric self focusing lead to asymmetric bubble excitation, thus inducing off-axis self-injection.

SU-E-T-512: Electromagnetic Simulations of the Dielectric Wall Accelerator

Energy Technology Data Exchange (ETDEWEB)

Uselmann, A; Mackie, T [University of Wisconsin and Morgridge Institute for Research, Madison, WI (United States)

2014-06-01

Purpose: To characterize and parametrically study the key components of a dielectric wall accelerator through electromagnetic modeling and particle tracking. Methods: Electromagnetic and particle tracking simulations were performed using a commercial code (CST Microwave Studio, CST Inc.) utilizing the finite integration technique. A dielectric wall accelerator consists of a series of stacked transmission lines sequentially fired in synchrony with an ion pulse. Numerous properties of the stacked transmission lines, including geometric, material, and electronic properties, were analyzed and varied in order to assess their impact on the transverse and axial electric fields. Additionally, stacks of transmission lines were simulated in order to quantify the parasitic effect observed in closely packed lines. Particle tracking simulations using the particle-in-cell method were performed on the various stacks to determine the impact of the above properties on the resultant phase space of the ions. Results: Examination of the simulation results show that novel geometries can shape the accelerating pulse in order to reduce the energy spread and increase the average energy of accelerated ions. Parasitic effects were quantified for various geometries and found to vary with distance from the end of the transmission line and along the beam axis. An optimal arrival time of an ion pulse relative to the triggering of the transmission lines for a given geometry was determined through parametric study. Benchmark simulations of single transmission lines agree well with published experimental results. Conclusion: This work characterized the behavior of the transmission lines used in a dielectric wall accelerator and used this information to improve them in novel ways. Utilizing novel geometries, we were able to improve the accelerating gradient and phase space of the accelerated particle bunch. Through simulation, we were able to discover and optimize design issues with the device at

Multi-scale multi-physics computational chemistry simulation based on ultra-accelerated quantum chemical molecular dynamics method for structural materials in boiling water reactor

International Nuclear Information System (INIS)

Miyamoto, Akira; Sato, Etsuko; Sato, Ryo; Inaba, Kenji; Hatakeyama, Nozomu

2014-01-01

In collaboration with experimental experts we have reported in the present conference (Hatakeyama, N. et al., “Experiment-integrated multi-scale, multi-physics computational chemistry simulation applied to corrosion behaviour of BWR structural materials”) the results of multi-scale multi-physics computational chemistry simulations applied to the corrosion behaviour of BWR structural materials. In macro-scale, a macroscopic simulator of anode polarization curve was developed to solve the spatially one-dimensional electrochemical equations on the material surface in continuum level in order to understand the corrosion behaviour of typical BWR structural material, SUS304. The experimental anode polarization behaviours of each pure metal were reproduced by fitting all the rates of electrochemical reactions and then the anode polarization curve of SUS304 was calculated by using the same parameters and found to reproduce the experimental behaviour successfully. In meso-scale, a kinetic Monte Carlo (KMC) simulator was applied to an actual-time simulation of the morphological corrosion behaviour under the influence of an applied voltage. In micro-scale, an ultra-accelerated quantum chemical molecular dynamics (UA-QCMD) code was applied to various metallic oxide surfaces of Fe 2 O 3 , Fe 3 O 4 , Cr 2 O 3 modelled as same as water molecules and dissolved metallic ions on the surfaces, then the dissolution and segregation behaviours were successfully simulated dynamically by using UA-QCMD. In this paper we describe details of the multi-scale, multi-physics computational chemistry method especially the UA-QCMD method. This method is approximately 10,000,000 times faster than conventional first-principles molecular dynamics methods based on density-functional theory (DFT), and the accuracy was also validated for various metals and metal oxides compared with DFT results. To assure multi-scale multi-physics computational chemistry simulation based on the UA-QCMD method for

The Computer Program LIAR for Beam Dynamics Calculations in Linear Accelerators

International Nuclear Information System (INIS)

Assmann, R.W.; Adolphsen, C.; Bane, K.; Raubenheimer, T.O.; Siemann, R.H.; Thompson, K.

2011-01-01

Linear accelerators are the central components of the proposed next generation of linear colliders. They need to provide acceleration of up to 750 GeV per beam while maintaining very small normalized emittances. Standard simulation programs, mainly developed for storage rings, do not meet the specific requirements for high energy linear accelerators. We present a new program LIAR ('LInear Accelerator Research code') that includes wakefield effects, a 6D coupled beam description, specific optimization algorithms and other advanced features. Its modular structure allows to use and to extend it easily for different purposes. The program is available for UNIX workstations and Windows PC's. It can be applied to a broad range of accelerators. We present examples of simulations for SLC and NLC.

Three-Dimensional Dynamics of Breakout Afterburner Ion Acceleration Using High-Contrast Short-Pulse Laser and Nanoscale Targets

International Nuclear Information System (INIS)

Yin, L.; Albright, B. J.; Bowers, K. J.; Fernandez, J. C.; Jung, D.; Hegelich, B. M.

2011-01-01

Breakout afterburner (BOA) laser-ion acceleration has been demonstrated for the first time in the laboratory. In the BOA, an initially solid-density target undergoes relativistically induced transparency, initiating a period of enhanced ion acceleration. First-ever kinetic simulations of the BOA in three dimensions show that the ion beam forms lobes in the direction orthogonal to laser polarization and propagation. Analytic theory presented for the electron dynamics in the laser ponderomotive field explains how azimuthal symmetry breaks even for a symmetric laser intensity profile; these results are consistent with recent experiments at the Trident laser facility.

Average accelerator simulation Truebeam using phase space in IAEA format

International Nuclear Information System (INIS)

Santana, Emico Ferreira; Milian, Felix Mas; Paixao, Paulo Oliveira; Costa, Raranna Alves da; Velasco, Fermin Garcia

2015-01-01

In this paper is used a computational code of radiation transport simulation based on Monte Carlo technique, in order to model a linear accelerator of treatment by Radiotherapy. This work is the initial step of future proposals which aim to study several treatment of patient by Radiotherapy, employing computational modeling in cooperation with the institutions UESC, IPEN, UFRJ e COI. The Chosen simulation code is GATE/Geant4. The average accelerator is TrueBeam of Varian Company. The geometric modeling was based in technical manuals, and radiation sources on the phase space for photons, provided by manufacturer in the IAEA (International Atomic Energy Agency) format. The simulations were carried out in equal conditions to experimental measurements. Were studied photons beams of 6MV, with 10 per 10 cm of field, focusing on a water phantom. For validation were compared dose curves in depth, lateral profiles in different depths of the simulated results and experimental data. The final modeling of this accelerator will be used in future works involving treatments and real patients. (author)

An adaptive cryptographic accelerator for network storage security on dynamically reconfigurable platform

Science.gov (United States)

Tang, Li; Liu, Jing-Ning; Feng, Dan; Tong, Wei

2008-12-01

Existing security solutions in network storage environment perform poorly because cryptographic operations (encryption and decryption) implemented in software can dramatically reduce system performance. In this paper we propose a cryptographic hardware accelerator on dynamically reconfigurable platform for the security of high performance network storage system. We employ a dynamic reconfigurable platform based on a FPGA to implement a PowerPCbased embedded system, which executes cryptographic algorithms. To reduce the reconfiguration latency, we apply prefetch scheduling. Moreover, the processing elements could be dynamically configured to support different cryptographic algorithms according to the request received by the accelerator. In the experiment, we have implemented AES (Rijndael) and 3DES cryptographic algorithms in the reconfigurable accelerator. Our proposed reconfigurable cryptographic accelerator could dramatically increase the performance comparing with the traditional software-based network storage systems.

Correlation of chemical shifts predicted by molecular dynamics simulations for partially disordered proteins

Energy Technology Data Exchange (ETDEWEB)

Karp, Jerome M.; Erylimaz, Ertan; Cowburn, David, E-mail: cowburn@cowburnlab.org, E-mail: David.cowburn@einstein.yu.edu [Albert Einstein College of Medicine of Yeshiva University, Department of Biochemistry (United States)

2015-01-15

There has been a longstanding interest in being able to accurately predict NMR chemical shifts from structural data. Recent studies have focused on using molecular dynamics (MD) simulation data as input for improved prediction. Here we examine the accuracy of chemical shift prediction for intein systems, which have regions of intrinsic disorder. We find that using MD simulation data as input for chemical shift prediction does not consistently improve prediction accuracy over use of a static X-ray crystal structure. This appears to result from the complex conformational ensemble of the disordered protein segments. We show that using accelerated molecular dynamics (aMD) simulations improves chemical shift prediction, suggesting that methods which better sample the conformational ensemble like aMD are more appropriate tools for use in chemical shift prediction for proteins with disordered regions. Moreover, our study suggests that data accurately reflecting protein dynamics must be used as input for chemical shift prediction in order to correctly predict chemical shifts in systems with disorder.

Electromagnetic computer simulations of collective ion acceleration by a relativistic electron beam

International Nuclear Information System (INIS)

Galvez, M.; Gisler, G.R.

1988-01-01

A 2.5 electromagnetic particle-in-cell computer code is used to study the collective ion acceleration when a relativistic electron beam is injected into a drift tube partially filled with cold neutral plasma. The simulations of this system reveals that the ions are subject to electrostatic acceleration by an electrostatic potential that forms behind the head of the beam. This electrostatic potential develops soon after the beam is injected into the drift tube, drifts with the beam, and eventually settles to a fixed position. At later times, this electrostatic potential becomes a virtual cathode. When the permanent position of the electrostatic potential is at the edge of the plasma or further up, then ions are accelerated forward and a unidirectional ion flow is obtained otherwise a bidirectional ion flow occurs. The ions that achieve higher energy are those which drift with the negative potential. When the plasma density is varied, the simulations show that optimum acceleration occurs when the density ratio between the beam (n b ) and the plasma (n o ) is unity. Simulations were carried out by changing the ion mass. The results of these simulations corroborate the hypothesis that the ion acceleration mechanism is purely electrostatic, so that the ion acceleration depends inversely on the charge particle mass. The simulations also show that the ion maximum energy increased logarithmically with the electron beam energy and proportional with the beam current

Micrometeoroid impact simulations using a railgun electromagnetic accelerator

International Nuclear Information System (INIS)

Upshaw, J.L.; Kajs, J.P.

1991-01-01

The Center for Electromechanics at The University of Texas at Austin (CEM-UT), using a railgun electromagnetic (EM) accelerator, has done a series of hypervelocity micrometeoroid impact simulations. Simulations done to date (78 tests) were carried out under contracts with Lockheed Palo Alto Research Laboratory and Martin Marietta Corporation. The tests were designed to demonstrate that railguns can provide a repeatable means of accelerating particles between 10 -4 and 10 -7 g to hypervelocities within a high-vacuum flight chamber. Sodalime glass beads were accelerated up to 11 km/s impacting into silicon, aluminum, quartz and various proprietary targets. At the muzzle of the gun was a 5.8-m-long, high-vacuum flight chamber. Targets were placed in this chamber at various distances from the gun. Impact craters on all the targets were examined using a light-source microscope and several targets were further examined using a scanning electron microscope. Gun and flight range diagnostics, along with experimental setups and results for several of the experiments, are presented in this paper

Application of subset simulation methods to dynamic fault tree analysis

International Nuclear Information System (INIS)

Liu Mengyun; Liu Jingquan; She Ding

2015-01-01

Although fault tree analysis has been implemented in the nuclear safety field over the past few decades, it was recently criticized for the inability to model the time-dependent behaviors. Several methods are proposed to overcome this disadvantage, and dynamic fault tree (DFT) has become one of the research highlights. By introducing additional dynamic gates, DFT is able to describe the dynamic behaviors like the replacement of spare components or the priority of failure events. Using Monte Carlo simulation (MCS) approach to solve DFT has obtained rising attention, because it can model the authentic behaviors of systems and avoid the limitations in the analytical method. In this paper, it provides an overview and MCS information for DFT analysis, including the sampling of basic events and the propagation rule for logic gates. When calculating rare-event probability, large amount of simulations in standard MCS are required. To improve the weakness, subset simulation (SS) approach is applied. Using the concept of conditional probability and Markov Chain Monte Carlo (MCMC) technique, the SS method is able to accelerate the efficiency of exploring the failure region. Two cases are tested to illustrate the performance of SS approach, and the numerical results suggest that it gives high efficiency when calculating complicated systems with small failure probabilities. (author)

Computer codes for beam dynamics analysis of cyclotronlike accelerators

Science.gov (United States)

Smirnov, V.

2017-12-01

Computer codes suitable for the study of beam dynamics in cyclotronlike (classical and isochronous cyclotrons, synchrocyclotrons, and fixed field alternating gradient) accelerators are reviewed. Computer modeling of cyclotron segments, such as the central zone, acceleration region, and extraction system is considered. The author does not claim to give a full and detailed description of the methods and algorithms used in the codes. Special attention is paid to the codes already proven and confirmed at the existing accelerating facilities. The description of the programs prepared in the worldwide known accelerator centers is provided. The basic features of the programs available to users and limitations of their applicability are described.

Beam Dynamics Design Studies of a Superconducting Radioactive Ion Beam Post-accelerator

CERN Document Server

Fraser, MA; Pasini, M

2011-01-01

The HIE-ISOLDE project at CERN proposes a superconducting upgrade to increase the energy range and quality of the radioactive ion beams produced at ISOLDE, which are currently post- accelerated by the normal conducting REX linac. The specification and design choices for the HIE-ISOLDE linac are outlined along with a comprehensive beam dynamics study undertaken to understand and mitigate the sources of beam emittance dilution. The dominant cause of transverse emittance growth was attributed to the coupling between the transverse and longitudinal motions through the phase dependence of the rf defocusing force in the accelerating cavities. A parametric resonance induced by the coupling was observed and its excitation surveyed as a function of trans- verse phase advance using numerical simulations and analytic models to understand and avoid the regions of transverse beam instability. Other sources of emittance growth were studied and where necessary ameliorated, including the beam steering force in the quarter-wa...

GPU Accelerated Surgical Simulators for Complex Morhpology

DEFF Research Database (Denmark)

Mosegaard, Jesper; Sørensen, Thomas Sangild

2005-01-01

a springmass system in order to simulate a complex organ such as the heart. Computations are accelerated by taking advantage of modern graphics processing units (GPUs). Two GPU implementations are presented. They vary in their generality of spring connections and in the speedup factor they achieve...

Application of a Cycle Jump Technique for Acceleration of Fatigue Crack Growth Simulation

DEFF Research Database (Denmark)

Moslemian, Ramin; Berggreen, Christian; Karlsson, A.M.

2010-01-01

A method for accelerated simulation of fatigue crack growth in a bimaterial interface is proposed. To simulate fatigue crack growth in a bimaterial interface a routine is developed in the commercial finite element code ANSYS and a method to accelerate the simulation is implemented. The proposed m...... of the simulation show that with fair accuracy, using the cycle jump method, more than 70% reduction in computation time can be achieved....

An Adiabatic Phase-Matching Accelerator

Energy Technology Data Exchange (ETDEWEB)

Lemery, Francois [DESY; Floettmann, Klaus [DESY; Piot, Philippe [Northern Illinois U.; Kaertner, Franz X. [Hamburg U.; Assmann, Ralph [DESY

2017-12-22

We present a general concept to accelerate non-relativistic charged particles. Our concept employs an adiabatically-tapered dielectric-lined waveguide which supports accelerating phase velocities for synchronous acceleration. We propose an ansatz for the transient field equations, show it satisfies Maxwell's equations under an adiabatic approximation and find excellent agreement with a finite-difference time-domain computer simulation. The fields were implemented into the particle-tracking program {\\sc astra} and we present beam dynamics results for an accelerating field with a 1-mm-wavelength and peak electric field of 100~MV/m. The numerical simulations indicate that a $\\sim 200$-keV electron beam can be accelerated to an energy of $\\sim10$~MeV over $\\sim 10$~cm. The novel scheme is also found to form electron beams with parameters of interest to a wide range of applications including, e.g., future advanced accelerators, and ultra-fast electron diffraction.

Nonlinear dynamics aspects of particle accelerators

International Nuclear Information System (INIS)

Araki, H.; Ehlers, J.; Hepp, K.; Kippenhahn, R.; Weidenmuller, A.; Zittartz, J.

1986-01-01

This book contains 18 selections. Some of the titles are: Integrable and Nonintegrable Hamiltonian Systems; Nonlinear Dynamics Aspects of Modern Storage Rings; Nonlinear Beam-Beam Resonances; Synchro-Betatron Resonances; Review of Beam-Beam Simulations; and Perturbation Method in Nonlinear Dynamics

Special relativity in beam trajectory simulation in small accelerators

International Nuclear Information System (INIS)

Pramudita Anggraita; Budi Santosa; Taufik; Emy Mulyani; Frida Iswinning Diah

2012-01-01

Calculation for trajectory simulation of particle beam in small accelerators should account special relativity effect in the beam motion, which differs between parallel and perpendicular direction to the beam velocity. For small electron beam machine of 300 keV, the effect shows up as the rest mass of electron is only 511 keV. Neglecting the effect yields wrong kinetic energy after 300 kV of dc acceleration. For a 13 MeV PET (positron emission tomography) baby cyclotron accelerating proton beam, the effect increases the proton mass by about 1.4% at the final energy. To keep the beam isochronous with the accelerating radiofrequency, a radial increase of the average magnetic field must be designed accordingly. (author)

ELECTROMAGNETIC AND THERMAL SIMULATIONS FOR THE SWITCH REGION OF A COMPACT PROTON ACCELERATOR

International Nuclear Information System (INIS)

Wang, L; Caporaso, G J; Sullivan, J S

2007-01-01

A compact proton accelerator for medical applications is being developed at Lawrence Livermore National Laboratory. The accelerator architecture is based on the dielectric wall accelerator (DWA) concept. One critical area to consider is the switch region. Electric field simulations and thermal calculations of the switch area were performed to help determine the operating limits of rmed SiC switches. Different geometries were considered for the field simulation including the shape of the thin Indium solder meniscus between the electrodes and SiC. Electric field simulations were also utilized to demonstrate how the field stress could be reduced. Both transient and steady steady-state thermal simulations were analyzed to find the average power capability of the switches

A Hardware Accelerator for Fault Simulation Utilizing a Reconfigurable Array Architecture

Directory of Open Access Journals (Sweden)

Sungho Kang

1996-01-01

Full Text Available In order to reduce cost and to achieve high speed a new hardware accelerator for fault simulation has been designed. The architecture of the new accelerator is based on a reconfigurabl mesh type processing element (PE array. Circuit elements at the same topological level are simulated concurrently, as in a pipelined process. A new parallel simulation algorithm expands all of the gates to two input gates in order to limit the number of faults to two at each gate, so that the faults can be distributed uniformly throughout the PE array. The PE array reconfiguration operation provides a simulation speed advantage by maximizing the use of each PE cell.

Pseudo-random number generation for Brownian Dynamics and Dissipative Particle Dynamics simulations on GPU devices

International Nuclear Information System (INIS)

Phillips, Carolyn L.; Anderson, Joshua A.; Glotzer, Sharon C.

2011-01-01

Highlights: → Molecular Dynamics codes implemented on GPUs have achieved two-order of magnitude computational accelerations. → Brownian Dynamics and Dissipative Particle Dynamics simulations require a large number of random numbers per time step. → We introduce a method for generating small batches of pseudorandom numbers distributed over many threads of calculations. → With this method, Dissipative Particle Dynamics is implemented on a GPU device without requiring thread-to-thread communication. - Abstract: Brownian Dynamics (BD), also known as Langevin Dynamics, and Dissipative Particle Dynamics (DPD) are implicit solvent methods commonly used in models of soft matter and biomolecular systems. The interaction of the numerous solvent particles with larger particles is coarse-grained as a Langevin thermostat is applied to individual particles or to particle pairs. The Langevin thermostat requires a pseudo-random number generator (PRNG) to generate the stochastic force applied to each particle or pair of neighboring particles during each time step in the integration of Newton's equations of motion. In a Single-Instruction-Multiple-Thread (SIMT) GPU parallel computing environment, small batches of random numbers must be generated over thousands of threads and millions of kernel calls. In this communication we introduce a one-PRNG-per-kernel-call-per-thread scheme, in which a micro-stream of pseudorandom numbers is generated in each thread and kernel call. These high quality, statistically robust micro-streams require no global memory for state storage, are more computationally efficient than other PRNG schemes in memory-bound kernels, and uniquely enable the DPD simulation method without requiring communication between threads.

MODELING OF DYNAMIC PROCESSES IN PLANETARY IN-WHEEL MOTOR GEARBOXES OF MINE TRUCKS DURING ITS STARTING AND ACCELERATION

Directory of Open Access Journals (Sweden)

V. V. Mikhailov

2012-01-01

Full Text Available The paper describes a mathematical model for planetary double-row in-wheel motor gear box. Main parameters of its dynamic system have been determined in the paper. The paper reveals simulation of transition processes during starting and acceleration of a mine truck with electric motor wheels. Its own gear box frequency has been established theoretically and experimentally in the paper. The paper proposes an algorithm and program for calculations as an alternative to high-cost tests while investigating gear mechanism dynamics of large-size planetary gearboxes.

Complex of electrostatic accelerators for simulation and diagnostics of radiation damage

International Nuclear Information System (INIS)

Antuf'ev, Yu.P.; Belyaev, V.Kh.; Vergunov, A.D.

1983-01-01

The installation for simulation and diagnostics of radiation damage of materials is described. The installation consists of two electrostatic accelerators of vertical type for 5 MV and horizontal type for 800 kV. The accelerating complex ensures accelerated ion beam production in the independent operation regime as well as in the two beams target simultaneous irradiation regime, energy range of accelerated single-charged ions is 80 keV ... 5 MeV, homogeneity is better than +-0.05%. Oilless vacuum pumping out system is realized at the accelerating complex

Beam dynamics study of a 30 MeV electron linear accelerator to drive a neutron source

Science.gov (United States)

Kumar, Sandeep; Yang, Haeryong; Kang, Heung-Sik

2014-02-01

An experimental neutron facility based on 32 MeV/18.47 kW electron linac has been studied by means of PARMELA simulation code. Beam dynamics study for a traveling wave constant gradient electron accelerator is carried out to reach the preferential operation parameters (E = 30 MeV, P = 18 kW, dE/E E-gun, pre-buncher, buncher, and 2 accelerating columns. A disk-loaded, on-axis-coupled, 2π/3-mode type accelerating rf cavity is considered for this linac. After numerous optimizations of linac parameters, 32 MeV beam energy is obtained at the end of the linac. As high electron energy is required to produce acceptable neutron flux. The final neutron flux is estimated to be 5 × 1011 n/cm2/s/mA. Future development will be the real design of a 30 MeV electron linac based on S band traveling wave.

Acceleration of PIC simulation with GPU

International Nuclear Information System (INIS)

Suzuki, Junya; Shimazu, Hironori; Fukazawa, Keiichiro; Den, Mitsue

2011-01-01

Particle-in-cell (PIC) is a simulation technique for plasma physics. The large number of particles in high-resolution plasma simulation increases the volume computation required, making it vital to increase computation speed. In this study, we attempt to accelerate computation speed on graphics processing units (GPUs) using KEMPO, a PIC simulation code package. We perform two tests for benchmarking, with small and large grid sizes. In these tests, we run KEMPO1 code using a CPU only, both a CPU and a GPU, and a GPU only. The results showed that performance using only a GPU was twice that of using a CPU alone. While, execution time for using both a CPU and GPU is comparable to the tests with a CPU alone, because of the significant bottleneck in communication between the CPU and GPU. (author)

Single-particle dynamics in a nonlinear accelerator lattice: attaining a large tune spread with octupoles in IOTA

Energy Technology Data Exchange (ETDEWEB)

Antipov, S. A.; Nagaitsev, S.; Valishev, A.

2017-04-01

Fermilab is constructing the Integrable Optics Test Accelerator (IOTA) as the centerpiece of the Accelerator R&D Program towards high-intensity circular machines. One of the factors limiting the beam intensity in present circular accelerators is collective instabilities, which can be suppressed by a spread of betatron frequencies (tunes) through the Landau damping mechanism or by an external damper, if the instability is slow enough. The spread is usually created by octupole magnets, which introduce the tune dependence on the amplitude and, in some cases, by a chromatic spread (tune dependence on particle's momentum). The introduction of octupoles usually lead to a resonant behavior and a reduction of the dynamic aperture. One of the goals of the IOTA research program is to achieve a high betatron tune spread, while retaining a large dynamic aperture using conventional octupole magnets in a special but realistic accelerator configuration. In this report, we present results of computer simulations of an electron beam in the IOTA by particle tracking and the Frequency Map Analysis. The results show that the ring's octupole magnets can be configured to provide a betatron tune shift of 0.08 (for particles at large amplitudes) with the dynamical aperture of over 20 beam sigma for a 150-MeV electron beam. The influence of the synchrotron motion, lattice errors, and magnet imperfections is insignificant for the parameters and levels of tolerances set by the design of the ring. The described octupole insert could be beneficial for suppression of space-charge induced instabilities in high intensity machines.

Efficient molecular dynamics simulations with many-body potentials on graphics processing units

Science.gov (United States)

Fan, Zheyong; Chen, Wei; Vierimaa, Ville; Harju, Ari

2017-09-01

Graphics processing units have been extensively used to accelerate classical molecular dynamics simulations. However, there is much less progress on the acceleration of force evaluations for many-body potentials compared to pairwise ones. In the conventional force evaluation algorithm for many-body potentials, the force, virial stress, and heat current for a given atom are accumulated within different loops, which could result in write conflict between different threads in a CUDA kernel. In this work, we provide a new force evaluation algorithm, which is based on an explicit pairwise force expression for many-body potentials derived recently (Fan et al., 2015). In our algorithm, the force, virial stress, and heat current for a given atom can be accumulated within a single thread and is free of write conflicts. We discuss the formulations and algorithms and evaluate their performance. A new open-source code, GPUMD, is developed based on the proposed formulations. For the Tersoff many-body potential, the double precision performance of GPUMD using a Tesla K40 card is equivalent to that of the LAMMPS (Large-scale Atomic/Molecular Massively Parallel Simulator) molecular dynamics code running with about 100 CPU cores (Intel Xeon CPU X5670 @ 2.93 GHz).

cellGPU: Massively parallel simulations of dynamic vertex models

Science.gov (United States)

Sussman, Daniel M.

2017-10-01

Vertex models represent confluent tissue by polygonal or polyhedral tilings of space, with the individual cells interacting via force laws that depend on both the geometry of the cells and the topology of the tessellation. This dependence on the connectivity of the cellular network introduces several complications to performing molecular-dynamics-like simulations of vertex models, and in particular makes parallelizing the simulations difficult. cellGPU addresses this difficulty and lays the foundation for massively parallelized, GPU-based simulations of these models. This article discusses its implementation for a pair of two-dimensional models, and compares the typical performance that can be expected between running cellGPU entirely on the CPU versus its performance when running on a range of commercial and server-grade graphics cards. By implementing the calculation of topological changes and forces on cells in a highly parallelizable fashion, cellGPU enables researchers to simulate time- and length-scales previously inaccessible via existing single-threaded CPU implementations. Program Files doi:http://dx.doi.org/10.17632/6j2cj29t3r.1 Licensing provisions: MIT Programming language: CUDA/C++ Nature of problem: Simulations of off-lattice "vertex models" of cells, in which the interaction forces depend on both the geometry and the topology of the cellular aggregate. Solution method: Highly parallelized GPU-accelerated dynamical simulations in which the force calculations and the topological features can be handled on either the CPU or GPU. Additional comments: The code is hosted at https://gitlab.com/dmsussman/cellGPU, with documentation additionally maintained at http://dmsussman.gitlab.io/cellGPUdocumentation

Accelerator simulation and theoretical modelling of radiation effects (SMoRE)

CERN Document Server

2018-01-01

This publication summarizes the findings and conclusions of the IAEA coordinated research project (CRP) on accelerator simulation and theoretical modelling of radiation effects, aimed at supporting Member States in the development of advanced radiation-resistant structural materials for implementation in innovative nuclear systems. This aim can be achieved through enhancement of both experimental neutron-emulation capabilities of ion accelerators and improvement of the predictive efficiency of theoretical models and computer codes. This dual approach is challenging but necessary, because outputs of accelerator simulation experiments need adequate theoretical interpretation, and theoretical models and codes need high dose experimental data for their verification. Both ion irradiation investigations and computer modelling have been the specific subjects of the CRP, and the results of these studies are presented in this publication which also includes state-ofthe- art reviews of four major aspects of the project...

Injector and beam transport simulation study of proton dielectric wall accelerator

International Nuclear Information System (INIS)

Zhao, Quantang; Yuan, P.; Zhang, Z.M.; Cao, S.C; Shen, X.K.; Jing, Y.; Ma, Y.Y.; Yu, C.S.; Li, Z.P.; Liu, M.; Xiao, R.Q.; Zhao, H.W.

2012-01-01

A simulation study of a short-pulsed proton injector for, and beam transport in, a dielectric wall accelerator (DWA) has been carried out using the particle-in-cell (PIC) code Warp. It was shown that applying “tilt pulse” voltage waveforms on three electrodes enables the production of a shorter bunch by the injector. The fields in the DWA beam tube were simulated using Computer Simulation Technology’s Microwave Studio (CST MWS) package, with various choices for the boundary conditions. For acceleration in the DWA, the beam transport was simulated with Warp, using applied fields obtained by running CST MWS. Our simulations showed that the electric field at the entrance to the DWA represents a challenging issue for the beam transport. We thus simulated a configuration with a mesh at the entrance of the DWA, intended to improve the entrance field. In these latter simulations, a proton bunch was successfully accelerated from 130 keV to about 36 MeV in a DWA with a length of 36.75 cm. As the beam bunch progresses, its transverse dimensions diminish from (roughly) 0.5×0.5 cm to 0.2×0.4 cm. The beam pulse lengthens from 1 cm to 2 cm due to lack of longitudinal compression fields. -- Highlights: ► A pulse proton injector with tilt voltages on the three electrodes was simulated. ► The fields in different part of the DWA were simulated with CST and analyzed. ► The proton beam transport in DWA was simulated with Warp successfully. ► The simulation can help for designing a real DWA.

On acceleration of plasmoids in magnetohydrodynamic simulations of magnetotail reconnection

International Nuclear Information System (INIS)

Scholer, M.; Hautz, R.

1991-01-01

The formation and acceleration of plasmoids is investigated by two-dimensional magnetohydrodynamic simulations. The initial equilibrium contains a plasma sheet with a northward magnetic field (B z ) component and a tailward pressure gradient. Reconnection is initiated by three different methods: Case A, a constant resistivity is applied everywhere and a tearing mode evolves, case B, a spatially localized resistivity is fixed in the near-Earth region, and case C, the resistivity is allowed to depend on the electrical current density. In case A, the authors obtain the same results as have been presented by Otto et al. (1990): the tearing instability releases the tension of the closed field lines so that the inherent pressure gradient of the two-dimensional system is not balanced anymore. The pressure gradient then sets the plasmoid into motion. Any sling-shot effect of open magnetic field lines is of minor importance. A completely different behavior has been found in cases B and C. In these cases the high-speed flow in the wedge-shaped region tailward of the near-Earth neutral line pushes against the detached plasmoid and drives it tailward. The ideal terms contributing to the acceleration are still only the pressure and the magnetic field term. However, in these cases the pressure is due to the dynamic pressure of the fast outflow from the reconnection region. The outflow in the wedge-shaped region on both sides of the neutral line is due to acceleration of plasma by tangential magnetic stresses at the slow mode shocks extending form the X line

Symbolic mathematical computing: orbital dynamics and application to accelerators

International Nuclear Information System (INIS)

Fateman, R.

1986-01-01

Computer-assisted symbolic mathematical computation has become increasingly useful in applied mathematics. A brief introduction to such capabilitites and some examples related to orbital dynamics and accelerator physics are presented. (author)

Simulations and measurements of coupling impedance for modern particle accelerator devices

CERN Document Server

AUTHOR|(CDS)2158523; Biancacci, Nicolò; Mostacci, Andrea

In this document it has been treated the study of the coupling impedance in modern devices, already installed or not, in different particle accelerators. In the specific case: • For a device in-phase of project, several simulations for impedance calculation have been done. • For a component already realized and used, measurements of coupling impedance value have been done. Simulations are used to determine the impact of the interconnect between to magnets, designed for the future particle accelerator FCC, on the overall impedance of the machine which is about 100 km long. In particular has been done a check between theory, simulations and measurements of components already built, allowing a better and deeper study of the component we have analysed. Controls that probably will be helpful to have a clear guideline in future works. The measurements instead concern in an existing component that was already used in LHC, the longest particle accelerator ever realised on the planet, 27 km long. The coupling impe...

D-leaping: Accelerating stochastic simulation algorithms for reactions with delays

International Nuclear Information System (INIS)

Bayati, Basil; Chatelain, Philippe; Koumoutsakos, Petros

2009-01-01

We propose a novel, accelerated algorithm for the approximate stochastic simulation of biochemical systems with delays. The present work extends existing accelerated algorithms by distributing, in a time adaptive fashion, the delayed reactions so as to minimize the computational effort while preserving their accuracy. The accuracy of the present algorithm is assessed by comparing its results to those of the corresponding delay differential equations for a representative biochemical system. In addition, the fluctuations produced from the present algorithm are comparable to those from an exact stochastic simulation with delays. The algorithm is used to simulate biochemical systems that model oscillatory gene expression. The results indicate that the present algorithm is competitive with existing works for several benchmark problems while it is orders of magnitude faster for certain systems of biochemical reactions.

Accelerating convergence of molecular dynamics-based structural relaxation

DEFF Research Database (Denmark)

Christensen, Asbjørn

2005-01-01

We describe strategies to accelerate the terminal stage of molecular dynamics (MD)based relaxation algorithms, where a large fraction of the computational resources are used. First, we analyze the qualitative and quantitative behavior of the QuickMin family of MD relaxation algorithms and explore...

Simulation Studies of the Dielectric Grating as an Accelerating and Focusing Structure

International Nuclear Information System (INIS)

Soong, Ken; Peralta, E.A.; Byer, R.L.; Colby, E.

2011-01-01

A grating-based design is a promising candidate for a laser-driven dielectric accelerator. Through simulations, we show the merits of a readily fabricated grating structure as an accelerating component. Additionally, we show that with a small design perturbation, the accelerating component can be converted into a focusing structure. The understanding of these two components is critical in the successful development of any complete accelerator. The concept of accelerating electrons with the tremendous electric fields found in lasers has been proposed for decades. However, until recently the realization of such an accelerator was not technologically feasible. Recent advances in the semiconductor industry, as well as advances in laser technology, have now made laser-driven dielectric accelerators imminent. The grating-based accelerator is one proposed design for a dielectric laser-driven accelerator. This design, which was introduced by Plettner, consists of a pair of opposing transparent binary gratings, illustrated in Fig. 1. The teeth of the gratings serve as a phase mask, ensuring a phase synchronicity between the electromagnetic field and the moving particles. The current grating accelerator design has the drive laser incident perpendicular to the substrate, which poses a laser-structure alignment complication. The next iteration of grating structure fabrication seeks to monolithically create an array of grating structures by etching the grating's vacuum channel into a fused silica wafer. With this method it is possible to have the drive laser confined to the plane of the wafer, thus ensuring alignment of the laser-and-structure, the two grating halves, and subsequent accelerator components. There has been previous work using 2-dimensional finite difference time domain (2D-FDTD) calculations to evaluate the performance of the grating accelerator structure. However, this work approximates the grating as an infinite structure and does not accurately model a

Beam-front dynamics and ion acceleration in drifting intense relativistic electron beams

International Nuclear Information System (INIS)

Alexander, K.F.; Hintze, W.

1976-01-01

Collective ion acceleration at the injection of a relativistic electron beam into a low-pressure gas or a plasma is discussed and its strong dependence on the beam-front dynamics is shown. A simple one-dimensional model taking explicitly into account the motion and ionizing action of the ions in the beam-front region is developed for the calculation of the beam drift velocity. The obtained pressure dependence is in good agreement with experimental data. The energy distribution is shown of the ions accelerated in the moving potential well of the space charge region. Scaling laws for the beam-front dynamics and ion acceleration are derived. (J.U.)

Robust flight control using incremental nonlinear dynamic inversion and angular acceleration prediction

NARCIS (Netherlands)

Sieberling, S.; Chu, Q.P.; Mulder, J.A.

2010-01-01

This paper presents a flight control strategy based on nonlinear dynamic inversion. The approach presented, called incremental nonlinear dynamic inversion, uses properties of general mechanical systems and nonlinear dynamic inversion by feeding back angular accelerations. Theoretically, feedback of

Design and Optimization of Large Accelerator Systems through High-Fidelity Electromagnetic Simulations

International Nuclear Information System (INIS)

Ng, Cho; Akcelik, Volkan; Candel, Arno; Chen, Sheng; Ge, Lixin; Kabel, Andreas; Lee, Lie-Quan; Li, Zenghai; Prudencio, Ernesto; Schussman, Greg; Uplenchwar1, Ravi; Xiao1, Liling; Ko1, Kwok; Austin, T.; Cary, J.R.; Ovtchinnikov, S.; Smith, D.N.; Werner, G.R.; Bellantoni, L.; TechX Corp.; Fermilab

2008-01-01

SciDAC1, with its support for the 'Advanced Computing for 21st Century Accelerator Science and Technology' (AST) project, witnessed dramatic advances in electromagnetic (EM) simulations for the design and optimization of important accelerators across the Office of Science. In SciDAC2, EM simulations continue to play an important role in the 'Community Petascale Project for Accelerator Science and Simulation' (ComPASS), through close collaborations with SciDAC CETs/Institutes in computational science. Existing codes will be improved and new multi-physics tools will be developed to model large accelerator systems with unprecedented realism and high accuracy using computing resources at petascale. These tools aim at targeting the most challenging problems facing the ComPASS project. Supported by advances in computational science research, they have been successfully applied to the International Linear Collider (ILC) and the Large Hadron Collider (LHC) in High Energy Physics (HEP), the JLab 12-GeV Upgrade in Nuclear Physics (NP), as well as the Spallation Neutron Source (SNS) and the Linac Coherent Light Source (LCLS) in Basic Energy Sciences (BES)

Design and optimization of large accelerator systems through high-fidelity electromagnetic simulations

International Nuclear Information System (INIS)

Ng, C; Akcelik, V; Candel, A; Chen, S; Ge, L; Kabel, A; Lee, Lie-Quan; Li, Z; Prudencio, E; Schussman, G; Uplenchwar, R; Xiao, L; Ko, K; Austin, T; Cary, J R; Ovtchinnikov, S; Smith, D N; Werner, G R; Bellantoni, L

2008-01-01

SciDAC-1, with its support for the 'Advanced Computing for 21st Century Accelerator Science and Technology' project, witnessed dramatic advances in electromagnetic (EM) simulations for the design and optimization of important accelerators across the Office of Science. In SciDAC2, EM simulations continue to play an important role in the 'Community Petascale Project for Accelerator Science and Simulation' (ComPASS), through close collaborations with SciDAC Centers and Insitutes in computational science. Existing codes will be improved and new multi-physics tools will be developed to model large accelerator systems with unprecedented realism and high accuracy using computing resources at petascale. These tools aim at targeting the most challenging problems facing the ComPASS project. Supported by advances in computational science research, they have been successfully applied to the International Linear Collider and the Large Hadron Collider in high energy physics, the JLab 12-GeV Upgrade in nuclear physics, and the Spallation Neutron Source and the Linac Coherent Light Source in basic energy sciences

Fast acceleration of 2D wave propagation simulations using modern computational accelerators.

Directory of Open Access Journals (Sweden)

Wei Wang

Full Text Available Recent developments in modern computational accelerators like Graphics Processing Units (GPUs and coprocessors provide great opportunities for making scientific applications run faster than ever before. However, efficient parallelization of scientific code using new programming tools like CUDA requires a high level of expertise that is not available to many scientists. This, plus the fact that parallelized code is usually not portable to different architectures, creates major challenges for exploiting the full capabilities of modern computational accelerators. In this work, we sought to overcome these challenges by studying how to achieve both automated parallelization using OpenACC and enhanced portability using OpenCL. We applied our parallelization schemes using GPUs as well as Intel Many Integrated Core (MIC coprocessor to reduce the run time of wave propagation simulations. We used a well-established 2D cardiac action potential model as a specific case-study. To the best of our knowledge, we are the first to study auto-parallelization of 2D cardiac wave propagation simulations using OpenACC. Our results identify several approaches that provide substantial speedups. The OpenACC-generated GPU code achieved more than 150x speedup above the sequential implementation and required the addition of only a few OpenACC pragmas to the code. An OpenCL implementation provided speedups on GPUs of at least 200x faster than the sequential implementation and 30x faster than a parallelized OpenMP implementation. An implementation of OpenMP on Intel MIC coprocessor provided speedups of 120x with only a few code changes to the sequential implementation. We highlight that OpenACC provides an automatic, efficient, and portable approach to achieve parallelization of 2D cardiac wave simulations on GPUs. Our approach of using OpenACC, OpenCL, and OpenMP to parallelize this particular model on modern computational accelerators should be applicable to other

The numerical simulation of accelerator components

International Nuclear Information System (INIS)

Herrmannsfeldt, W.B.; Hanerfeld, H.

1987-05-01

The techniques of the numerical simulation of plasmas can be readily applied to problems in accelerator physics. Because the problems usually involve a single component ''plasma,'' and times that are at most, a few plasma oscillation periods, it is frequently possible to make very good simulations with relatively modest computation resources. We will discuss the methods and illustrate them with several examples. One of the more powerful techniques of understanding the motion of charged particles is to view computer-generated motion pictures. We will show several little movie strips to illustrate the discussions. The examples will be drawn from the application areas of Heavy Ion Fusion, electron-positron linear colliders and injectors for free-electron lasers. 13 refs., 10 figs., 2 tabs

Energy-aware SQL query acceleration through FPGA-based dynamic partial reconfiguration

NARCIS (Netherlands)

Becher, Andreas; Bauer, Florian; Ziener, Daniel; Teich, Jürgen

2014-01-01

In this paper, we propose an approach for energy-aware FPGA-based query acceleration for databases on embedded devices. After the analysis of an incoming query, a query-specific hardware accelerator is generated on-the-fly and loaded on the FPGA for subsequent query execution using partial dynamic

Accelerating large-scale phase-field simulations with GPU

Directory of Open Access Journals (Sweden)

Xiaoming Shi

2017-10-01

Full Text Available A new package for accelerating large-scale phase-field simulations was developed by using GPU based on the semi-implicit Fourier method. The package can solve a variety of equilibrium equations with different inhomogeneity including long-range elastic, magnetostatic, and electrostatic interactions. Through using specific algorithm in Compute Unified Device Architecture (CUDA, Fourier spectral iterative perturbation method was integrated in GPU package. The Allen-Cahn equation, Cahn-Hilliard equation, and phase-field model with long-range interaction were solved based on the algorithm running on GPU respectively to test the performance of the package. From the comparison of the calculation results between the solver executed in single CPU and the one on GPU, it was found that the speed on GPU is enormously elevated to 50 times faster. The present study therefore contributes to the acceleration of large-scale phase-field simulations and provides guidance for experiments to design large-scale functional devices.

Analysis and simulation of an electrostatic FN Tandem accelerator

International Nuclear Information System (INIS)

Ugarte, Ricardo

2007-01-01

An analysis, modeling, and simulation of a positive ion FN Tandem electrostatic accelerator has been done. That has induced a detailed study over all physics components inside the accelerators tank, the terminal control stabilizer (TPS), the corona point, the capacitor pick off (CPO) and over the generating voltmeter (GVM) signals. The parameter of the model has been developed using the Prediction Error estimation Methods (PEM), and within classical techniques of analysis of circuits. The result obtained was used to check and increase the stability of the terminal voltage using Matlab software tools. The result of the simulation was contrasted with the reality and it was possible to improve the stability of the terminal voltage, successfully. The facility belongs to ARN (Argentina) and, in principle, it was installed to development an AMS system. (author)

New Developments in the Simulation of Advanced Accelerator Concepts

International Nuclear Information System (INIS)

Paul, K.; Cary, J.R.; Cowan, B.; Bruhwiler, D.L.; Geddes, C.G.R.; Mullowney, P.J.; Messmer, P.; Esarey, E.; Cormier-Michel, E.; Leemans, W.P.; Vay, J.-L.

2008-01-01

Improved computational methods are essential to the diverse and rapidly developing field of advanced accelerator concepts. We present an overview of some computational algorithms for laser-plasma concepts and high-brightness photocathode electron sources. In particular, we discuss algorithms for reduced laser-plasma models that can be orders of magnitude faster than their higher-fidelity counterparts, as well as important on-going efforts to include relevant additional physics that has been previously neglected. As an example of the former, we present 2D laser wakefield accelerator simulations in an optimal Lorentz frame, demonstrating and gt;10 GeV energy gain of externally injected electrons over a 2 m interaction length, showing good agreement with predictions from scaled simulations and theory, with a speedup factor of ∼2,000 as compared to standard particle-in-cell.

Simulation an Accelerator driven Subcritical Reactor core with thorium fuel

International Nuclear Information System (INIS)

Shirmohammadi, L.; Pazirandeh, A.

2011-01-01

The main purpose of this work is simulation An Accelerator driven Subcritical core with Thorium as a new generation nuclear fuel. In this design core , A subcritical core coupled to an accelerator with proton beam (E p =1 GeV) is simulated by MCNPX code .Although the main purpose of ADS systems are transmutation and use MA (Minor Actinides) as a nuclear fuel but another use of these systems are use thorium fuel. This simulated core has two fuel assembly type : (Th-U) and (U-Pu) . Consequence , Neutronic parameters related to ADS core are calculated. It has shown that Thorium fuel is use able in this core and less nuclear waste ,Although Iran has not Thorium reserves but study on Thorium fuel cycle can open a new horizontal in use nuclear energy as a clean energy and without nuclear waste

Single-particle dynamics in a nonlinear accelerator lattice: attaining a large tune spread with octupoles in IOTA

Science.gov (United States)

Antipov, S. A.; Nagaitsev, S.; Valishev, A.

2017-04-01

Fermilab is constructing the Integrable Optics Test Accelerator (IOTA) as the centerpiece of the Accelerator R&D Program towards high-intensity circular machines. One of the factors limiting the beam intensity in present circular accelerators is collective instabilities, which can be suppressed by a spread of betatron frequencies (tunes) through the Landau damping mechanism or by an external damper, if the instability is slow enough. The spread is usually created by octupole magnets, which introduce the tune dependence on the amplitude and, in some cases, by a chromatic spread (tune dependence on particle's momentum). The introduction of octupoles usually has both beneficial (improved Landau damping) and harmful properties, such as a resonant behavior and a reduction of the dynamic aperture. One of the research goals at the IOTA ring is to achieve a large betatron tune spread, while retaining a large dynamic aperture, using conventional octupole magnets in a special but realistic accelerator configuration. The configuration, although not integrable by design, approximates an autonomous 2D Hamiltonian system. In this paper, we present results of computer simulations of an electron beam in the IOTA by particle tracking and the Frequency Map Analysis. The results show that the ring's octupole magnets can be configured to provide a betatron tune shift of 0.08 (for particles at large amplitudes) with the dynamical aperture of over 20 beam sigma for a 150-MeV electron beam. The influence of the synchrotron motion, lattice errors, and magnet imperfections is insignificant for the parameters and levels of tolerances set by the design of the ring. The described octupole insert could be beneficial for enhancing Landau damping in high intensity machines.

Pathways and mechanisms for product release in the engineered haloalkane dehalogenases explored using classical and random acceleration molecular dynamics simulations

Czech Academy of Sciences Publication Activity Database

Klvana, M.; Pavlová, M.; Koudeláková, T.; Chaloupková, R.; Dvořák, P.; Prokop, Z.; Stsiapanava, A.; Kutý, Michal; Kutá-Smatanová, Ivana; Dohnálek, Jan; Kulhánek, P.; Damborský, J.

2009-01-01

Roč. 392, č. 5 (2009), s. 1339-1356 ISSN 0022-2836 R&D Projects: GA MŠk(CZ) LC06010 Institutional research plan: CEZ:AV0Z40500505; CEZ:AV0Z60870520 Keywords : haloalkane dehalogenase * product release * random acceleration molecular dynamics Subject RIV: CD - Macromolecular Chemistry Impact factor: 3.871, year: 2009

An FFT-accelerated time-domain multiconductor transmission line simulator

KAUST Repository

Bagci, Hakan; Yilmaz, Ali E.; Michielssen, Eric

2010-01-01

simulator is amenable to hybridization, is fast Fourier transform (FFT)-accelerated, and is highly accurate: 1) It can easily be hybridized with TDIE-based field solvers (in a fully rigorous mathematical framework) for performing electromagnetic interference

Advanced visualization technology for terascale particle accelerator simulations

International Nuclear Information System (INIS)

Ma, K-L; Schussman, G.; Wilson, B.; Ko, K.; Qiang, J.; Ryne, R.

2002-01-01

This paper presents two new hardware-assisted rendering techniques developed for interactive visualization of the terascale data generated from numerical modeling of next generation accelerator designs. The first technique, based on a hybrid rendering approach, makes possible interactive exploration of large-scale particle data from particle beam dynamics modeling. The second technique, based on a compact texture-enhanced representation, exploits the advanced features of commodity graphics cards to achieve perceptually effective visualization of the very dense and complex electromagnetic fields produced from the modeling of reflection and transmission properties of open structures in an accelerator design. Because of the collaborative nature of the overall accelerator modeling project, the visualization technology developed is for both desktop and remote visualization settings. We have tested the techniques using both time varying particle data sets containing up to one billion particle s per time step and electromagnetic field data sets with millions of mesh elements

The peculiarities of particle dynamics in the Fermi acceleration scheme

International Nuclear Information System (INIS)

Buts, V.A.

2015-01-01

With examples of discrete and distributed mathematical models of the Fermi acceleration mechanism, a usefulness, or even necessity, of taking into account of singular solutions is demonstrated. Also the role is shown of those parts of phase space where the uniqueness theorem conditions to form the dynamics of physical systems are broken. It was found that the dynamics of particles in discrete and distributed mathematical schemes of Fermi acceleration can be significantly different. The difference is due to the fact that the distributed model takes into account the effects of phase space where conditions do not correspond to those necessary for application of the uniqueness theorem. The role of singular solutions is under discussion as well.

Contact detection acceleration in pebble flow simulation for pebble bed reactor systems

Energy Technology Data Exchange (ETDEWEB)

Li, Y.; Ji, W. [Department of Mechanical, Aerospace, and Nuclear Engineering Rensselaer, Polytechnic Institute, 110 8th street, Troy, NY 12180 (United States)

2013-07-01

Pebble flow simulation plays an important role in the steady state and transient analysis of thermal-hydraulics and neutronics for Pebble Bed Reactors (PBR). The Discrete Element Method (DEM) and the modified Molecular Dynamics (MD) method are widely used to simulate the pebble motion to obtain the distribution of pebble concentration, velocity, and maximum contact stress. Although DEM and MD present high accuracy in the pebble flow simulation, they are quite computationally expensive due to the large quantity of pebbles to be simulated in a typical PBR and the ubiquitous contacts and collisions between neighboring pebbles that need to be detected frequently in the simulation, which greatly restricted their applicability for large scale PBR designs such as PBMR400. Since the contact detection accounts for more than 60% of the overall CPU time in the pebble flow simulation, the acceleration of the contact detection can greatly enhance the overall efficiency. In the present work, based on the design features of PBRs, two contact detection algorithms, the basic cell search algorithm and the bounding box search algorithm are investigated and applied to pebble contact detection. The influence from the PBR system size, core geometry and the searching cell size on the contact detection efficiency is presented. Our results suggest that for present PBR applications, the bounding box algorithm is less sensitive to the aforementioned effects and has superior performance in pebble contact detection compared with basic cell search algorithm. (authors)

Contact detection acceleration in pebble flow simulation for pebble bed reactor systems

International Nuclear Information System (INIS)

Li, Y.; Ji, W.

2013-01-01

Pebble flow simulation plays an important role in the steady state and transient analysis of thermal-hydraulics and neutronics for Pebble Bed Reactors (PBR). The Discrete Element Method (DEM) and the modified Molecular Dynamics (MD) method are widely used to simulate the pebble motion to obtain the distribution of pebble concentration, velocity, and maximum contact stress. Although DEM and MD present high accuracy in the pebble flow simulation, they are quite computationally expensive due to the large quantity of pebbles to be simulated in a typical PBR and the ubiquitous contacts and collisions between neighboring pebbles that need to be detected frequently in the simulation, which greatly restricted their applicability for large scale PBR designs such as PBMR400. Since the contact detection accounts for more than 60% of the overall CPU time in the pebble flow simulation, the acceleration of the contact detection can greatly enhance the overall efficiency. In the present work, based on the design features of PBRs, two contact detection algorithms, the basic cell search algorithm and the bounding box search algorithm are investigated and applied to pebble contact detection. The influence from the PBR system size, core geometry and the searching cell size on the contact detection efficiency is presented. Our results suggest that for present PBR applications, the bounding box algorithm is less sensitive to the aforementioned effects and has superior performance in pebble contact detection compared with basic cell search algorithm. (authors)

Parallel replica dynamics method for bistable stochastic reaction networks: Simulation and sensitivity analysis

Science.gov (United States)

Wang, Ting; Plecháč, Petr

2017-12-01

Stochastic reaction networks that exhibit bistable behavior are common in systems biology, materials science, and catalysis. Sampling of stationary distributions is crucial for understanding and characterizing the long-time dynamics of bistable stochastic dynamical systems. However, simulations are often hindered by the insufficient sampling of rare transitions between the two metastable regions. In this paper, we apply the parallel replica method for a continuous time Markov chain in order to improve sampling of the stationary distribution in bistable stochastic reaction networks. The proposed method uses parallel computing to accelerate the sampling of rare transitions. Furthermore, it can be combined with the path-space information bounds for parametric sensitivity analysis. With the proposed methodology, we study three bistable biological networks: the Schlögl model, the genetic switch network, and the enzymatic futile cycle network. We demonstrate the algorithmic speedup achieved in these numerical benchmarks. More significant acceleration is expected when multi-core or graphics processing unit computer architectures and programming tools such as CUDA are employed.

Parallel replica dynamics method for bistable stochastic reaction networks: Simulation and sensitivity analysis.

Science.gov (United States)

Wang, Ting; Plecháč, Petr

2017-12-21

Stochastic reaction networks that exhibit bistable behavior are common in systems biology, materials science, and catalysis. Sampling of stationary distributions is crucial for understanding and characterizing the long-time dynamics of bistable stochastic dynamical systems. However, simulations are often hindered by the insufficient sampling of rare transitions between the two metastable regions. In this paper, we apply the parallel replica method for a continuous time Markov chain in order to improve sampling of the stationary distribution in bistable stochastic reaction networks. The proposed method uses parallel computing to accelerate the sampling of rare transitions. Furthermore, it can be combined with the path-space information bounds for parametric sensitivity analysis. With the proposed methodology, we study three bistable biological networks: the Schlögl model, the genetic switch network, and the enzymatic futile cycle network. We demonstrate the algorithmic speedup achieved in these numerical benchmarks. More significant acceleration is expected when multi-core or graphics processing unit computer architectures and programming tools such as CUDA are employed.

Acceleration of coupled granular flow and fluid flow simulations in pebble bed energy systems

Energy Technology Data Exchange (ETDEWEB)

Li, Yanheng, E-mail: liy19@rpi.edu [Department of Mechanical, Aerospace, and Nuclear Engineering, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY (United States); Ji, Wei, E-mail: jiw2@rpi.edu [Department of Mechanical, Aerospace, and Nuclear Engineering, Rensselaer Polytechnic Institute, 110 8th Street, Troy, NY (United States)

2013-05-15

Highlights: ► Fast simulation of coupled pebble flow and coolant flow in PBR systems is studied. ► Dimension reduction based on axisymmetric geometry shows significant speedup. ► Relaxation of coupling frequency is investigated and an optimal range is determined. ► A total of 80% efficiency increase is achieved by the two fast strategies. ► Fast strategies can be applied to simulating other general fluidized bed systems. -- Abstract: Fast and accurate approaches to simulating the coupled particle flow and fluid flow are of importance to the analysis of large particle-fluid systems. This is especially needed when one tries to simulate pebble flow and coolant flow in Pebble Bed Reactor (PBR) energy systems on a routine basis. As one of the Generation IV designs, the PBR design is a promising nuclear energy system with high fuel performance and inherent safety. A typical PBR core can be modeled as a particle-fluid system with strong interactions among pebbles, coolants and reactor walls. In previous works, the coupled Discrete Element Method (DEM)-Computational Fluid Dynamics (CFD) approach has been investigated and applied to modeling PBR systems. However, the DEM-CFD approach is computationally expensive due to large amounts of pebbles in PBR systems. This greatly restricts the PBR analysis for the real time prediction and inclusion of more physics. In this work, based on the symmetry of the PBR geometry and the slow motion characteristics of the pebble flow, two acceleration strategies are proposed. First, a simplified 3D-DEM/2D-CFD approach is proposed to speed up the DEM-CFD simulation without loss of accuracy. Pebble flow is simulated by a full 3D DEM, while the coolant flow field is calculated with a 2D CFD simulation by averaging variables along the annular direction in the cylindrical and annular geometries. Second, based on the slow motion of pebble flow, the impact of the coupling frequency on the computation accuracy and efficiency is

Acceleration of coupled granular flow and fluid flow simulations in pebble bed energy systems

International Nuclear Information System (INIS)

Li, Yanheng; Ji, Wei

2013-01-01

Highlights: ► Fast simulation of coupled pebble flow and coolant flow in PBR systems is studied. ► Dimension reduction based on axisymmetric geometry shows significant speedup. ► Relaxation of coupling frequency is investigated and an optimal range is determined. ► A total of 80% efficiency increase is achieved by the two fast strategies. ► Fast strategies can be applied to simulating other general fluidized bed systems. -- Abstract: Fast and accurate approaches to simulating the coupled particle flow and fluid flow are of importance to the analysis of large particle-fluid systems. This is especially needed when one tries to simulate pebble flow and coolant flow in Pebble Bed Reactor (PBR) energy systems on a routine basis. As one of the Generation IV designs, the PBR design is a promising nuclear energy system with high fuel performance and inherent safety. A typical PBR core can be modeled as a particle-fluid system with strong interactions among pebbles, coolants and reactor walls. In previous works, the coupled Discrete Element Method (DEM)-Computational Fluid Dynamics (CFD) approach has been investigated and applied to modeling PBR systems. However, the DEM-CFD approach is computationally expensive due to large amounts of pebbles in PBR systems. This greatly restricts the PBR analysis for the real time prediction and inclusion of more physics. In this work, based on the symmetry of the PBR geometry and the slow motion characteristics of the pebble flow, two acceleration strategies are proposed. First, a simplified 3D-DEM/2D-CFD approach is proposed to speed up the DEM-CFD simulation without loss of accuracy. Pebble flow is simulated by a full 3D DEM, while the coolant flow field is calculated with a 2D CFD simulation by averaging variables along the annular direction in the cylindrical and annular geometries. Second, based on the slow motion of pebble flow, the impact of the coupling frequency on the computation accuracy and efficiency is

Photonic Crystal Laser-Driven Accelerator Structures

International Nuclear Information System (INIS)

Cowan, B

2004-01-01

The authors discuss simulated photonic crystal structure designs for laser-driven particle acceleration. They focus on three-dimensional planar structures based on the so-called ''woodpile'' lattice, demonstrating guiding of a speed-of-light accelerating mode by a defect in the photonic crystal lattice. They introduce a candidate geometry and discuss the properties of the accelerating mode. They also discuss the linear beam dynamics in the structure present a novelmethod for focusing the beam. In addition they describe ongoing investigations of photonic crystal fiber-based structures

"Light sail" acceleration reexamined.

Science.gov (United States)

Macchi, Andrea; Veghini, Silvia; Pegoraro, Francesco

2009-08-21

The dynamics of the acceleration of ultrathin foil targets by the radiation pressure of superintense, circularly polarized laser pulses is investigated by analytical modeling and particle-in-cell simulations. By addressing self-induced transparency and charge separation effects, it is shown that for "optimal" values of the foil thickness only a thin layer at the rear side is accelerated by radiation pressure. The simple "light sail" model gives a good estimate of the energy per nucleon, but overestimates the conversion efficiency of laser energy into monoenergetic ions.

'Light Sail' Acceleration Reexamined

International Nuclear Information System (INIS)

Macchi, Andrea; Veghini, Silvia; Pegoraro, Francesco

2009-01-01

The dynamics of the acceleration of ultrathin foil targets by the radiation pressure of superintense, circularly polarized laser pulses is investigated by analytical modeling and particle-in-cell simulations. By addressing self-induced transparency and charge separation effects, it is shown that for 'optimal' values of the foil thickness only a thin layer at the rear side is accelerated by radiation pressure. The simple 'light sail' model gives a good estimate of the energy per nucleon, but overestimates the conversion efficiency of laser energy into monoenergetic ions.

2nd European Advanced Accelerator Concepts Workshop

CERN Document Server

Assmann, Ralph; Grebenyuk, Julia; EAAC 2015

2016-01-01

The European Advanced Accelerator Concepts Workshop has the mission to discuss and foster methods of beam acceleration with gradients beyond state of the art in operational facilities. The most cost effective and compact methods for generating high energy particle beams shall be reviewed and assessed. This includes diagnostics methods, timing technology, special need for injectors, beam matching, beam dynamics with advanced accelerators and development of adequate simulations. This workshop is organized in the context of the EU-funded European Network for Novel Accelerators (EuroNNAc2), that includes 52 Research Institutes and universities.

A universal postprocessing toolkit for accelerator simulation and data analysis

International Nuclear Information System (INIS)

Borland, M.

1998-01-01

The Self-Describing Data Sets (SDDS) toolkit comprises about 70 generally-applicable programs sharing a common data protocol. At the Advanced Photon Source (APS), SDDS performs the vast majority of operational data collection and processing, most data display functions, and many control functions. In addition, a number of accelerator simulation codes use SDDS for all post-processing and data display. This has three principle advantages: first, simulation codes need not provide customized post-processing tools, thus simplifying development and maintenance. Second, users can enhance code capabilities without changing the code itself, by adding SDDS-based pre- and post-processing. Third, multiple codes can be used together more easily, by employing SDDS for data transfer and adaptation. Given its broad applicability, the SDDS file protocol is surprisingly simple, making it quite easy for simulations to generate SDDS-compliant data. This paper discusses the philosophy behind SDDS, contrasting it with some recent trends, and outlines the capabilities of the toolkit. The paper also gives examples of using SDDS for accelerator simulation

A unified approach to building accelerator simulation software for the SSC

International Nuclear Information System (INIS)

Paxson, V.; Aragon, C.; Peggs, S.; Saltmarsh, C.; Schachinger, L.

1989-03-01

To adequately simulate the physics and control of a complex accelerator requires a substantial number of programs which must present a uniform interface to both the user and the internal representation of the accelerator. If these programs are to be truly modular, so that their use can be orchestrated as needed, the specification of both their graphical and data interfaces must be carefully designed. We describe the state of such SSC simulation software, with emphasis on addressing these uniform interface needs by using a standardized data set format and object-oriented approaches to graphics and modeling. 12 refs

The dynamical simulation of transient three-dimensional cryogenic liquid sloshing oscillations under low-gravity and microgravity

Science.gov (United States)

Chi, Yong Mann

A numerical simulation model has been developed for the dynamical behavior of spacecraft propellant, both during the draining and the closing of the tank outlet at the onset of suction dip affected by the asymmetric combined gravity gradient and gravity jitter accelerations. In particular the effect of the surface tension of the fluids in the partially filled dewar (applicable to the Gravity Probe-B spacecraft dewar tank and fuel tanks for a liquid rocket) with rotation has been simulated and investigated. Two different cases of accelerations, one with gravity jitter dominated and the other equally weighted between gravity gradient and gravity jitter accelerations, are studied. In the development of this numerical simulation model, the NASA-VOF3D has been used as a supplement to the numerical program of this dissertation. The NASA-VOF3D code has been used for performing the three-dimensional incompressible flows with free surface. This is also used for controlling liquid sloshing inside the tank when the spacecraft is orbiting. To keep track of the location of the liquid, the fractional volume of fluid (VOF) technique was used. The VOF is based on the indicator function of the region occupied by the liquid with an Eulerian approach to solve the free surface phenomena between liquid and gas phases. For the calculation of surface tension force, the VOF model is also used. The newly developed simulation model is used to investigate the characteristics of liquid hydrogen draining in terms of the residual amount of trapped liquid at the onset of the suction dip and residual liquid volume at the time the dip of the liquid-vapor interface formed. This investigation simulates the characteristics of liquid oscillations due to liquid container outlet shut-off at the onset of suction dip. These phenomena checked how these mechanisms affected the excitation of slosh waves during the course of liquid draining and after shut-off tank outlet. In the present study, the dynamical

Particle-in-cell simulations of plasma accelerators and electron-neutral collisions

Directory of Open Access Journals (Sweden)

David L. Bruhwiler

2001-10-01

Full Text Available We present 2D simulations of both beam-driven and laser-driven plasma wakefield accelerators, using the object-oriented particle-in-cell code XOOPIC, which is time explicit, fully electromagnetic, and capable of running on massively parallel supercomputers. Simulations of laser-driven wakefields with low \\(∼10^{16} W/cm^{2}\\ and high \\(∼10^{18} W/cm^{2}\\ peak intensity laser pulses are conducted in slab geometry, showing agreement with theory and fluid simulations. Simulations of the E-157 beam wakefield experiment at the Stanford Linear Accelerator Center, in which a 30 GeV electron beam passes through 1 m of preionized lithium plasma, are conducted in cylindrical geometry, obtaining good agreement with previous work. We briefly describe some of the more significant modifications to XOOPIC required by this work, and summarize the issues relevant to modeling relativistic electron-neutral collisions in a particle-in-cell code.

Accelerating solidification process simulation for large-sized system of liquid metal atoms using GPU with CUDA

Energy Technology Data Exchange (ETDEWEB)

Jie, Liang [School of Information Science and Engineering, Hunan University, Changshang, 410082 (China); Li, KenLi, E-mail: lkl@hnu.edu.cn [School of Information Science and Engineering, Hunan University, Changshang, 410082 (China); National Supercomputing Center in Changsha, 410082 (China); Shi, Lin [School of Information Science and Engineering, Hunan University, Changshang, 410082 (China); Liu, RangSu [School of Physics and Micro Electronic, Hunan University, Changshang, 410082 (China); Mei, Jing [School of Information Science and Engineering, Hunan University, Changshang, 410082 (China)

2014-01-15

Molecular dynamics simulation is a powerful tool to simulate and analyze complex physical processes and phenomena at atomic characteristic for predicting the natural time-evolution of a system of atoms. Precise simulation of physical processes has strong requirements both in the simulation size and computing timescale. Therefore, finding available computing resources is crucial to accelerate computation. However, a tremendous computational resource (GPGPU) are recently being utilized for general purpose computing due to its high performance of floating-point arithmetic operation, wide memory bandwidth and enhanced programmability. As for the most time-consuming component in MD simulation calculation during the case of studying liquid metal solidification processes, this paper presents a fine-grained spatial decomposition method to accelerate the computation of update of neighbor lists and interaction force calculation by take advantage of modern graphics processors units (GPU), enlarging the scale of the simulation system to a simulation system involving 10 000 000 atoms. In addition, a number of evaluations and tests, ranging from executions on different precision enabled-CUDA versions, over various types of GPU (NVIDIA 480GTX, 580GTX and M2050) to CPU clusters with different number of CPU cores are discussed. The experimental results demonstrate that GPU-based calculations are typically 9∼11 times faster than the corresponding sequential execution and approximately 1.5∼2 times faster than 16 CPU cores clusters implementations. On the basis of the simulated results, the comparisons between the theoretical results and the experimental ones are executed, and the good agreement between the two and more complete and larger cluster structures in the actual macroscopic materials are observed. Moreover, different nucleation and evolution mechanism of nano-clusters and nano-crystals formed in the processes of metal solidification is observed with large

Machine learning molecular dynamics for the simulation of infrared spectra.

Science.gov (United States)

Gastegger, Michael; Behler, Jörg; Marquetand, Philipp

2017-10-01

Machine learning has emerged as an invaluable tool in many research areas. In the present work, we harness this power to predict highly accurate molecular infrared spectra with unprecedented computational efficiency. To account for vibrational anharmonic and dynamical effects - typically neglected by conventional quantum chemistry approaches - we base our machine learning strategy on ab initio molecular dynamics simulations. While these simulations are usually extremely time consuming even for small molecules, we overcome these limitations by leveraging the power of a variety of machine learning techniques, not only accelerating simulations by several orders of magnitude, but also greatly extending the size of systems that can be treated. To this end, we develop a molecular dipole moment model based on environment dependent neural network charges and combine it with the neural network potential approach of Behler and Parrinello. Contrary to the prevalent big data philosophy, we are able to obtain very accurate machine learning models for the prediction of infrared spectra based on only a few hundreds of electronic structure reference points. This is made possible through the use of molecular forces during neural network potential training and the introduction of a fully automated sampling scheme. We demonstrate the power of our machine learning approach by applying it to model the infrared spectra of a methanol molecule, n -alkanes containing up to 200 atoms and the protonated alanine tripeptide, which at the same time represents the first application of machine learning techniques to simulate the dynamics of a peptide. In all of these case studies we find an excellent agreement between the infrared spectra predicted via machine learning models and the respective theoretical and experimental spectra.

Accelerated pavement testing efforts using the heavy vehicle simulator

CSIR Research Space (South Africa)

Du Plessis, Louw

2017-10-01

Full Text Available This paper provides a brief description of the technological developments involved in the development and use of the Heavy Vehicle Simulator (HVS) accelerated pavement testing equipment. This covers the period from concept in the late 1960’s...

Superconducting cavities for the APT accelerator

International Nuclear Information System (INIS)

Krawczyk, F.L.; Gentzlinger, R.C.; Haynes, B.; Montoya, D.I.; Rusnak, B.; Shapiro, A.H.

1997-01-01

The design of an Accelerator Production of Tritium (APT) facility being investigated at Los Alamos includes a linear accelerator using superconducting rf-cavities for the acceleration of a high-current cw proton beam. For electron accelerators with particles moving at the speed of light (β ∼ 1.0), resonators with a rounded shape, consisting of ellipsoidal and cylindrical sections, are well established. They are referred to as elliptical cavities. For the APT-design, this shape has been adapted for much slower proton beams with β ranging from 0.60 to 0.94. This is a new energy range, in which resonators of an elliptical type have never been used before. Simulations with the well-proven electromagnetic modeling tools MAFIA and SUPERFISH were performed. The structures have been optimized for their rf and mechanical properties as well as for beam dynamics requirements. The TRAK-RF simulation code is used to investigate potential multipacting in these structures. All the simulations will be put to a final test in experiments performed on single cell cavities that have started in the structures laboratory

Study and realization of an electron linear accelerator. Dynamics of accelerated electrons

International Nuclear Information System (INIS)

Bernard, J.

1966-12-01

The theoretical characteristics of the electron linear accelerator are: 30 MeV for the energy W S and 250 mA for the peak current I c . The main utilization is the intense production of fast neutrons by the reactions (γ,n) and (γ,f) induced in a target of natural uranium by the accelerated electrons. In the first part of the thesis, relative to the study and the realization of the accelerator, a new equation of dispersion is established analytically when the guide is loaded with round-edged irises. The relation is compared with the equation established by CHU and Hansen, WALKINSHAW, KVASIL in the case of a guide loaded with flat-edged irises. The experimental and theoretical curves of dispersion are compared. The accuracy of every relation of dispersion is estimated. The second part of the thesis is relative to the theoretical study of the electrons dynamics in the guide; it allows the derivation of the parameters of the beam: dispersion of phase, energy, dispersion of energy and the relation W S = f (I c ). The results relative to the first experiments are given and compared with the theoretical expectations. (author) [fr

Application of Java Technology to Simulation of Transient Effects in Accelerator Magnets

CERN Multimedia

CERN. Geneva

2017-01-01

Superconducting magnets are one of the key building blocks of modern high-energy particle accelerators. Operating at extremely low temperatures (1.9 K), superconducting magnets produce high magnetic field needed to control the trajectory of beams travelling at nearly the speed of light. With high performance comes considerable complexity represented by several coupled physical domains characterized by multi-rate and multi-scale behaviour. The full exploitation of the LHC, as well as the design of its upgrades and future accelerators calls for more accurate simulations. With such a long-term vision in mind, the STEAM (Simulation of Transient Effects in Accelerator Magnets) project has been establish and is based on two pillars: (i) models developed with optimised solvers for particular sub-problems, (ii) coupling interfaces allowing to exchange information between the models. In order to tackle these challenges and develop a maintainable and extendable simulation framework, a team of developers implemented a ...

Charged beam dynamics, particle accelerators and free electron lasers

CERN Document Server

Dattoli, Giuseppe; Sabia, Elio; Artioli, Marcello

2017-01-01

Charged Beam Dynamics, Particle Accelerators and Free Electron Lasers summarises different topics in the field of accelerators and of Free Electron Laser (FEL) devices. It is intended as a reference manual for the different aspects of FEL devices, explaining how to design both a FEL device and the accelerator providing the driving beam. It covers both theoretical and experimental aspects, allowing researchers to attempt a first design of a FEL device in different operating conditions. It provides an analysis of what is already available, what is needed, and what the challenges are to determine new progress in this field. All chapters contain complements and exercises that are designed in such a way that the reader will gradually acquire self-confidence with the matter treated in the book.

Strain-accelerated dynamics of soft colloidal glasses

KAUST Repository

Agarwal, Praveen

2011-04-11

We have investigated strain-accelerated dynamics of soft glasses theoretically and experimentally. Mechanical rheology measurements performed on a variety of systems reveal evidence for the speeding-up of relaxation at modest shear strains in both step and oscillatory shear flows. Using the soft glassy rheology (SGR) model framework, we show that the observed behavior is a fundamental, but heretofore unexplored attribute of soft glasses. © 2011 American Physical Society.

Intra-bunch-train transverse dynamics in the superconducting accelerators FLASH and European XFEL

Energy Technology Data Exchange (ETDEWEB)

Hellert, Thorsten

2017-11-15

FLASH and the European XFEL are linear accelerator driven SASE-FELs, operating in a pulsed mode with long bunch-trains. Multi-bunch FEL operation requires longitudinal and transverse stability within the bunch-train. The purpose of this work is to investigate the intra-bunch-train transverse dynamics at FLASH and XFEL. Key relationships of superconducting RF cavity operation, their misalignments and the resulting impact on the intra-bunch-train trajectory variation are described. In this thesis a numerical model is developed and simulations for different accelerating sections at FLASH and XFEL are performed. With the current operational setup significant intra-bunch-train trajectory variation must be considered, hence approaches for their reduction are discussed. The theoretical studies are compared to experimental results at FLASH. The observed trajectory variation during multi-bunch user runs is analyzed and related to causal intra-bunch-train variations of the RF and the following impact on the multi-bunch SASSE performance. Furthermore, HOM-based cavity misalignment measurements are performed and the deduction of misalignments from multi-bunch data is considered.

Spin dynamics of electron beams in circular accelerators; Spindynamik von Elektronenstrahlen in Kreisbeschleunigern

Energy Technology Data Exchange (ETDEWEB)

Boldt, Oliver

2014-04-15

Experiments using high energy beams of spin polarized, charged particles still prove to be very helpful in disclosing a deeper understanding of the fundamental structure of matter. An important aspect is to control the beam properties, such as brilliance, intensity, energy, and degree of spin polarization. In this context, the present studies show various numerical calculations of the spin dynamics of high energy electron beams in circular accelerators. Special attention has to be paid to the emission of synchrotron radiation, that occurs when deflecting charged particles on circular orbits. In the presence of the fluctuation of the kinetic energy due to the photon emission, each electron spin moves non-deterministically. This stochastic effect commonly slows down the speed of all numeric estimations. However, the shown simulations cover - using appropriate approximations - trackings for the motion of thousands of electron spins for up to thousands of turns. Those calculations are validated and complemented by empirical investigations at the electron stretcher facility ELSA of the University of Bonn. They can largely be extended to other boundary conditions and thus, can be consulted for new accelerator layouts.

Intra-bunch-train transverse dynamics in the superconducting accelerators FLASH and European XFEL

International Nuclear Information System (INIS)

Hellert, Thorsten

2017-11-01

FLASH and the European XFEL are linear accelerator driven SASE-FELs, operating in a pulsed mode with long bunch-trains. Multi-bunch FEL operation requires longitudinal and transverse stability within the bunch-train. The purpose of this work is to investigate the intra-bunch-train transverse dynamics at FLASH and XFEL. Key relationships of superconducting RF cavity operation, their misalignments and the resulting impact on the intra-bunch-train trajectory variation are described. In this thesis a numerical model is developed and simulations for different accelerating sections at FLASH and XFEL are performed. With the current operational setup significant intra-bunch-train trajectory variation must be considered, hence approaches for their reduction are discussed. The theoretical studies are compared to experimental results at FLASH. The observed trajectory variation during multi-bunch user runs is analyzed and related to causal intra-bunch-train variations of the RF and the following impact on the multi-bunch SASSE performance. Furthermore, HOM-based cavity misalignment measurements are performed and the deduction of misalignments from multi-bunch data is considered.

Object-oriented accelerator design with HPF

International Nuclear Information System (INIS)

Ji Qiang; Ryne, R.D.; Habib, S.

1998-01-01

In this paper, object-oriented design is applied to codes for beam dynamics simulations in accelerators using High Performance Fortran (HPF). This results in good maintainability, reusability, and extensibility of software, combined with the ease of parallel programming provided by HPF

Object-oriented accelerator design with HPF

Energy Technology Data Exchange (ETDEWEB)

Ji Qiang; Ryne, R.D.; Habib, S.

1998-12-31

In this paper, object-oriented design is applied to codes for beam dynamics simulations in accelerators using High Performance Fortran (HPF). This results in good maintainability, reusability, and extensibility of software, combined with the ease of parallel programming provided by HPF.

Single-particle dynamics in a nonlinear accelerator lattice: attaining a large tune spread with octupoles in IOTA

International Nuclear Information System (INIS)

Antipov, S.A.; Nagaitsev, S.; Valishev, A.

2017-01-01

Fermilab is constructing the Integrable Optics Test Accelerator (IOTA) as the centerpiece of the Accelerator R and D Program towards high-intensity circular machines. One of the factors limiting the beam intensity in present circular accelerators is collective instabilities, which can be suppressed by a spread of betatron frequencies (tunes) through the Landau damping mechanism or by an external damper, if the instability is slow enough. The spread is usually created by octupole magnets, which introduce the tune dependence on the amplitude and, in some cases, by a chromatic spread (tune dependence on particle's momentum). The introduction of octupoles usually has both beneficial (improved Landau damping) and harmful properties, such as a resonant behavior and a reduction of the dynamic aperture. One of the research goals at the IOTA ring is to achieve a large betatron tune spread, while retaining a large dynamic aperture, using conventional octupole magnets in a special but realistic accelerator configuration. The configuration, although not integrable by design, approximates an autonomous 2D Hamiltonian system. In this paper, we present results of computer simulations of an electron beam in the IOTA by particle tracking and the Frequency Map Analysis. The results show that the ring's octupole magnets can be configured to provide a betatron tune shift of 0.08 (for particles at large amplitudes) with the dynamical aperture of over 20 beam sigma for a 150-MeV electron beam. The influence of the synchrotron motion, lattice errors, and magnet imperfections is insignificant for the parameters and levels of tolerances set by the design of the ring. The described octupole insert could be beneficial for enhancing Landau damping in high intensity machines.

The 2017 Xe run at CERN Linac3: measurements and beam dynamics simulations

CERN Document Server

Benedetti, Stefano; Kuchler, Detlef; Lombardi, Alessandra; Wenander, Fredrik John Carl; Toivanen, Ville Aleksi; CERN. Geneva. ATS Department

2018-01-01

At CERN quark-gluon plasma and fixed target ion experiments are performed thanks to the Heavy-ion Facility, composed by different accelerators. The starting point is CERN Linac3, which delivers 4.2 MeV/u ion beams to the Low Energy Ion Ring (LEIR). In 2017 Linac3 accelerated Xe instead of the most usual Pb. Machine development (MD) time was allocated to adapt the accelerator to the new ion species. This article summarizes the measurements performed during the MD time allocated to characterize the line from the source to the filtering section. A parallel effort was devoted to match those measurements to the beam dynamics simulations, and the second part of the article highlights the results achieved in this regard. Thanks to the improved understanding of the machine critical areas, a list of possible improvements is proposed at the end.

Beam Dynamics Studies for a Laser Acceleration Experiment

CERN Document Server

Spencer, James; Noble, Robert; Palmer, Dennis T; Siemann, Robert

2005-01-01

The NLC Test Accelerator at SLAC was built to address various beam dynamics issues for the Next Linear Collider. An S-Band RF gun, originally proposed for the NLCTA, is being installed together with a large-angle extraction line at 60 MeV. This is followed by a matching section, final focus and buncher for the laser acceleration experiment, E163. The laser-electron interaction area is followed by a broad range, high resolution spectrometer (HES) for electron bunch analysis. The RF gun is discussed in another paper. We discuss only the beam dynamics and high resolution analysis system at 6 MeV based on using Parmela and high-order Transport for bunch charges from 50 pC to 1 nC. Beyond the diagnostics, this system uses the emittance compensating solenoids and a low energy, high resolution spectrometer (LES) to help tune for best operating point and match to the linac. Optical symmetries in the design of the 25.5° extraction line provide 1:1 phase space transfer without linear dispersion or use of sextu...

Simulation of space charge effects in particle accelerators. Annual report, August 1, 1983-September 30, 1984

International Nuclear Information System (INIS)

Haber, I.

1984-01-01

Progress during the FY83/84 period has involved both the use of existing numerical tools to investigate current issues, and the development of new techniques for future simulations of increasing sophistication. A balance has been sought with a view towards maximizing the utility of simulations to both present and future decisions in accelerator design. Emphasis during this contract has centered on investigating the nonlinear dynamics of a very low emittance beam with a realistic distribution function - especially when complications such as the image forces from a nearby conducting electrode are considered. A significant part of the effort during this period was also expended in spreading the simulation capabilities already developed. Versions of the SHIFT (Simulation of Heavy Ion Fusion Transport) series of computer codes have been installed on machines available to the HIF community. The enhanced availability of these codes has facilitated their use outside of NRL. For example, simulation results with a significant impact on MBE design were obtained at LBL using the MFECC Version of SHIFT-XY

Dynamical Aperture Control in Accelerator Lattices With Multipole Potentials

CERN Document Server

Morozov, I

2017-01-01

We develop tools for symbolic representation of a non-linear accelerator model and analytical methods for description of non-linear dynamics. Information relevant to the dynamic aperture (DA) is then obtained from this model and can be used for indirect DA control or as a complement to direct numerical optimization. We apply two analytical methods and use multipole magnets to satisfy derived analytical constraints. The accelerator model is represented as a product of unperturbed and perturbed exponential operators with the exponent of the perturbed operator given as a power series in the perturbation parameter. Normal forms can be applied to this representation and the lattice parameters are used to control the normal form Hamiltonian and normal form transformation. Hamiltonian control is used to compute a control term or controlled operator. Lattice parameters are then fitted to satisfy the imposed control constraints. Theoretical results, as well as illustrative examples, are presented.

3D electromagnetic simulation of spatial autoresonance acceleration of electron beams

International Nuclear Information System (INIS)

Dugar-Zhabon, V D; Orozco, E A; González, J D

2016-01-01

The results of full electromagnetic simulations of the electron beam acceleration by a TE 112 linear polarized electromagnetic field through Space Autoresonance Acceleration mechanism are presented. In the simulations, both the self-sustaned electric field and selfsustained magnetic field produced by the beam electrons are included into the elaborated 3D Particle in Cell code. In this system, the space profile of the magnetostatic field maintains the electron beams in the acceleration regime along their trajectories. The beam current density evolution is calculated applying the charge conservation method. The full magnetic field in the superparticle positions is found by employing the trilinear interpolation of the mesh node data. The relativistic Newton-Lorentz equation presented in the centered finite difference form is solved using the Boris algorithm that provides visualization of the beam electrons pathway and energy evolution. A comparison between the data obtained from the full electromagnetic simulations and the results derived from the motion equation depicted in an electrostatic approximation is carried out. It is found that the self-sustained magnetic field is a factor which improves the resonance phase conditions and reduces the beam energy spread. (paper)

Spin dynamics in storage rings and linear accelerators

Energy Technology Data Exchange (ETDEWEB)

Irwin, J. [Stanford Univ., CA (United States)

1994-12-01

The purpose of these lectures is to survey the subject of spin dynamics in accelerators: to give a sense of the underlying physics, the typical analytic and numeric methods used, and an overview of results achieved. Consideration will be limited to electrons and protons. Examples of experimental and theoretical results in both linear and circular machines are included.

Spin dynamics in storage rings and linear accelerators

International Nuclear Information System (INIS)

Irwin, J.

1994-04-01

The purpose of these lectures is to survey the subject of spin dynamics in accelerators: to give a sense of the underlying physics, the typical analytic and numeric methods used, and an overview of results achieved. Consideration will be limited to electrons and protons. Examples of experimental and theoretical results in both linear and circular machines are included

PIC simulation of electron acceleration in an underdense plasma

Directory of Open Access Journals (Sweden)

S Darvish Molla

2011-06-01

Full Text Available One of the interesting Laser-Plasma phenomena, when the laser power is high and ultra intense, is the generation of large amplitude plasma waves (Wakefield and electron acceleration. An intense electromagnetic laser pulse can create plasma oscillations through the action of the nonlinear pondermotive force. electrons trapped in the wake can be accelerated to high energies, more than 1 TW. Of the wide variety of methods for generating a regular electric field in plasmas with strong laser radiation, the most attractive one at the present time is the scheme of the Laser Wake Field Accelerator (LWFA. In this method, a strong Langmuir wave is excited in the plasma. In such a wave, electrons are trapped and can acquire relativistic energies, accelerated to high energies. In this paper the PIC simulation of wakefield generation and electron acceleration in an underdense plasma with a short ultra intense laser pulse is discussed. 2D electromagnetic PIC code is written by FORTRAN 90, are developed, and the propagation of different electromagnetic waves in vacuum and plasma is shown. Next, the accuracy of implementation of 2D electromagnetic code is verified, making it relativistic and simulating the generating of wakefield and electron acceleration in an underdense plasma. It is shown that when a symmetric electromagnetic pulse passes through the plasma, the longitudinal field generated in plasma, at the back of the pulse, is weaker than the one due to an asymmetric electromagnetic pulse, and thus the electrons acquire less energy. About the asymmetric pulse, when front part of the pulse has smaller time rise than the back part of the pulse, a stronger wakefield generates, in plasma, at the back of the pulse, and consequently the electrons acquire more energy. In an inverse case, when the rise time of the back part of the pulse is bigger in comparison with that of the back part, a weaker wakefield generates and this leads to the fact that the electrons

Localized saddle-point search and application to temperature-accelerated dynamics

Energy Technology Data Exchange (ETDEWEB)

Shim, Yunsic; Amar, Jacques G. [Department of Physics and Astronomy, University of Toledo, Toledo, Ohio 43606 (United States); Callahan, Nathan B. [Department of Physics and Astronomy, University of Toledo, Toledo, Ohio 43606 (United States); Department of Physics, Indiana University, Bloomington, Indiana 47405 (United States)

2013-03-07

We present a method for speeding up temperature-accelerated dynamics (TAD) simulations by carrying out a localized saddle-point (LSAD) search. In this method, instead of using the entire system to determine the energy barriers of activated processes, the calculation is localized by only including a small chunk of atoms around the atoms directly involved in the transition. Using this method, we have obtained N-independent scaling for the computational cost of the saddle-point search as a function of system size N. The error arising from localization is analyzed using a variety of model systems, including a variety of activated processes on Ag(100) and Cu(100) surfaces, as well as multiatom moves in Cu radiation damage and metal heteroepitaxial growth. Our results show significantly improved performance of TAD with the LSAD method, for the case of Ag/Ag(100) annealing and Cu/Cu(100) growth, while maintaining a negligibly small error in energy barriers.

Design and simulation of 3½-cell superconducting gun cavity and beam dynamics studies of the SASE-FEL System at the Institute of Accelerator Technologies at Ankara University

International Nuclear Information System (INIS)

Yildiz, H. Duran; Cakir, R.; Porsuk, D.

2015-01-01

Design and simulation of a superconducting gun cavity with 3½ cells have been studied in order to give the first push to the electron beam for the linear accelerating system at The Institute of Accelerator Technologies at Ankara University. Electrons are accelerated through the gun cavity with the help of the Radiofrequency power suppliers from cryogenic systems. Accelerating gradient should be as high as possible to accelerate electron beam inside the cavity. In this study, electron beam reaches to 9.17 MeV energy at the end of the gun cavity with the accelerating gradient; E c =19.21 MV/m. 1.3 GHz gun cavity consists of three TESLA-like shaped cells while the special designed gun-cell includes a cathode plug. Optimized important beam parameters inside the gun cavity, average beam current 3 mA, transverse emittance 2.5 mm mrad, repetition rate 30 MHz and other parameters are obtained for the SASE-FEL System. The Superfish/Poisson program is used to design each cell of the superconducting cavity. Superconducting gun cavity and Radiofrequency properties are studied by utilizing 2D Superfish/Poisson, 3D Computer Simulation Technology Microwave Studio, and 3D Computer Simulation Technology Particle Studio. Superfish/Poisson is also used to optimize the geometry of the cavity cells to get the highest accelerating gradient. The behavior of the particles along the beamline is included in this study. ASTRA Code is used to track the particles

Design and simulation of 3½-cell superconducting gun cavity and beam dynamics studies of the SASE-FEL System at the Institute of Accelerator Technologies at Ankara University

Energy Technology Data Exchange (ETDEWEB)

Yildiz, H. Duran, E-mail: hdyildiz@ankara.edu.tr [Institute of Accelerator Technologies, Ankara University, Ankara (Turkey); Cakir, R. [Nanotechnology Engineering Department, Recep Tayyip Erdogan University, Rize (Turkey); Porsuk, D. [Physics Department, Dumlupinar University, Kutahya (Turkey)

2015-06-11

Design and simulation of a superconducting gun cavity with 3½ cells have been studied in order to give the first push to the electron beam for the linear accelerating system at The Institute of Accelerator Technologies at Ankara University. Electrons are accelerated through the gun cavity with the help of the Radiofrequency power suppliers from cryogenic systems. Accelerating gradient should be as high as possible to accelerate electron beam inside the cavity. In this study, electron beam reaches to 9.17 MeV energy at the end of the gun cavity with the accelerating gradient; E{sub c}=19.21 MV/m. 1.3 GHz gun cavity consists of three TESLA-like shaped cells while the special designed gun-cell includes a cathode plug. Optimized important beam parameters inside the gun cavity, average beam current 3 mA, transverse emittance 2.5 mm mrad, repetition rate 30 MHz and other parameters are obtained for the SASE-FEL System. The Superfish/Poisson program is used to design each cell of the superconducting cavity. Superconducting gun cavity and Radiofrequency properties are studied by utilizing 2D Superfish/Poisson, 3D Computer Simulation Technology Microwave Studio, and 3D Computer Simulation Technology Particle Studio. Superfish/Poisson is also used to optimize the geometry of the cavity cells to get the highest accelerating gradient. The behavior of the particles along the beamline is included in this study. ASTRA Code is used to track the particles.

Metrics for comparing dynamic earthquake rupture simulations

Science.gov (United States)

Barall, Michael; Harris, Ruth A.

2014-01-01

Earthquakes are complex events that involve a myriad of interactions among multiple geologic features and processes. One of the tools that is available to assist with their study is computer simulation, particularly dynamic rupture simulation. A dynamic rupture simulation is a numerical model of the physical processes that occur during an earthquake. Starting with the fault geometry, friction constitutive law, initial stress conditions, and assumptions about the condition and response of the near‐fault rocks, a dynamic earthquake rupture simulation calculates the evolution of fault slip and stress over time as part of the elastodynamic numerical solution (Ⓔ see the simulation description in the electronic supplement to this article). The complexity of the computations in a dynamic rupture simulation make it challenging to verify that the computer code is operating as intended, because there are no exact analytic solutions against which these codes’ results can be directly compared. One approach for checking if dynamic rupture computer codes are working satisfactorily is to compare each code’s results with the results of other dynamic rupture codes running the same earthquake simulation benchmark. To perform such a comparison consistently, it is necessary to have quantitative metrics. In this paper, we present a new method for quantitatively comparing the results of dynamic earthquake rupture computer simulation codes.

Centrifuge Study of Pilot Tolerance to Acceleration and the Effects of Acceleration on Pilot Performance

Science.gov (United States)

Creer, Brent Y.; Smedal, Harald A.; Wingrove, Rodney C.

1960-01-01

A research program the general objective of which was to measure the effects of various sustained accelerations on the control performance of pilots, was carried out on the Aviation Medical Acceleration Laboratory centrifuge, U.S. Naval Air Development Center, Johnsville, PA. The experimental setup consisted of a flight simulator with the centrifuge in the control loop. The pilot performed his control tasks while being subjected to acceleration fields such as might be encountered by a forward-facing pilot flying an atmosphere entry vehicle. The study was divided into three phases. In one phase of the program, the pilots were subjected to a variety of sustained linear acceleration forces while controlling vehicles with several different sets of longitudinal dynamics. Here, a randomly moving target was displayed to the pilot on a cathode-ray tube. For each combination of acceleration field and vehicle dynamics, pilot tracking accuracy was measured and pilot opinion of the stability and control characteristics was recorded. Thus, information was obtained on the combined effects of complexity of control task and magnitude and direction of acceleration forces on pilot performance. These tests showed that the pilot's tracking performance deteriorated markedly at accelerations greater than about 4g when controlling a lightly damped vehicle. The tentative conclusion was also reached that regardless of the airframe dynamics involved, the pilot feels that in order to have the same level of control over the vehicle, an increase in the vehicle dynamic stability was required with increases in the magnitudes of the acceleration impressed upon the pilot. In another phase, boundaries of human tolerance of acceleration were established for acceleration fields such as might be encountered by a pilot flying an orbital vehicle. A special pilot restraint system was developed to increase human tolerance to longitudinal decelerations. The results of the tests showed that human tolerance

3D Simulations for a Micron-Scale, Dielectric-Based Acceleration Experiment

International Nuclear Information System (INIS)

Yoder, R. B.; Travish, G.; Xu Jin; Rosenzweig, J. B.

2009-01-01

An experimental program to demonstrate a dielectric, slab-symmetric accelerator structure has been underway for the past two years. These resonant devices are driven by a side-coupled 800-nm laser and can be configured to maintain the field profile necessary for synchronous acceleration and focusing of relativistic or nonrelativistic particles. We present 3D simulations of various versions of the structure geometry, including a metal-walled structure relevant to ongoing cold tests on resonant properties, and an all-dielectric structure to be constructed for a proof-of-principle acceleration experiment.

Acceleration of Radiance for Lighting Simulation by Using Parallel Computing with OpenCL

Energy Technology Data Exchange (ETDEWEB)

Zuo, Wangda; McNeil, Andrew; Wetter, Michael; Lee, Eleanor

2011-09-06

We report on the acceleration of annual daylighting simulations for fenestration systems in the Radiance ray-tracing program. The algorithm was optimized to reduce both the redundant data input/output operations and the floating-point operations. To further accelerate the simulation speed, the calculation for matrix multiplications was implemented using parallel computing on a graphics processing unit. We used OpenCL, which is a cross-platform parallel programming language. Numerical experiments show that the combination of the above measures can speed up the annual daylighting simulations 101.7 times or 28.6 times when the sky vector has 146 or 2306 elements, respectively.

Simulation of accelerator transmutation of long-lived nuclear wastes; Simulation de transmutation de dechets nucleaires a vie longue par accelerateur

Energy Technology Data Exchange (ETDEWEB)

Fabienne, Wolff-Bacha [Paris-11 Univ., 91 - Orsay (France)

1997-07-09

The incineration of minor actinides with a hybrid reactor (i.e. coupled with an accelerator) could reduce their radioactivity. The scientific tool used for simulations, the GEANT code implemented on a paralleled computer, has been confirmed initially on thin and thick targets and by simulation of a pressurized water reactor, a fast reactor like Superphenix, and a molten salt fast hybrid reactor `ATP`. Simulating a thermal hybrid reactor seems to indicate the non-negligible presence of neutrons which diffuse back to the accelerator. In spite of simplifications, the simulation of a molten lead fast hybrid reactor (as the CERN Fast Energy Amplifier) might indicate difficulties in the radial power distribution in the core, the life time of the window and the activated air leak risk. Finally, we propose a thermoelectric compact hybrid reactor, PRAHE - small atomic board hybrid reactor - the principle of which allows a neutron coupling between the accelerator and the reactor. (author) 270 refs., 91 figs., 31 tabs.

Constraint methods that accelerate free-energy simulations of biomolecules.

Science.gov (United States)

Perez, Alberto; MacCallum, Justin L; Coutsias, Evangelos A; Dill, Ken A

2015-12-28

Atomistic molecular dynamics simulations of biomolecules are critical for generating narratives about biological mechanisms. The power of atomistic simulations is that these are physics-based methods that satisfy Boltzmann's law, so they can be used to compute populations, dynamics, and mechanisms. But physical simulations are computationally intensive and do not scale well to the sizes of many important biomolecules. One way to speed up physical simulations is by coarse-graining the potential function. Another way is to harness structural knowledge, often by imposing spring-like restraints. But harnessing external knowledge in physical simulations is problematic because knowledge, data, or hunches have errors, noise, and combinatoric uncertainties. Here, we review recent principled methods for imposing restraints to speed up physics-based molecular simulations that promise to scale to larger biomolecules and motions.

Λ CDM is Consistent with SPARC Radial Acceleration Relation

Energy Technology Data Exchange (ETDEWEB)

Keller, B. W.; Wadsley, J. W., E-mail: kellerbw@mcmaster.ca [Department of Physics and Astronomy, McMaster University, Hamilton, ON L8S 4M1 (Canada)

2017-01-20

Recent analysis of the Spitzer Photometry and Accurate Rotation Curve (SPARC) galaxy sample found a surprisingly tight relation between the radial acceleration inferred from the rotation curves and the acceleration due to the baryonic components of the disk. It has been suggested that this relation may be evidence for new physics, beyond Λ CDM . In this Letter, we show that 32 galaxies from the MUGS2 match the SPARC acceleration relation. These cosmological simulations of star-forming, rotationally supported disks were simulated with a WMAP3 Λ CDM cosmology, and match the SPARC acceleration relation with less scatter than the observational data. These results show that this acceleration relation is a consequence of dissipative collapse of baryons, rather than being evidence for exotic dark-sector physics or new dynamical laws.

Impact of dynamic vegetation phenology on the simulated pan-Arctic land surface state

Science.gov (United States)

Teufel, Bernardo; Sushama, Laxmi; Arora, Vivek K.; Verseghy, Diana

2018-03-01

The pan-Arctic land surface is undergoing rapid changes in a warming climate, with near-surface permafrost projected to degrade significantly during the twenty-first century. Vegetation-related feedbacks have the potential to influence the rate of degradation of permafrost. In this study, the impact of dynamic phenology on the pan-Arctic land surface state, particularly near-surface permafrost, for the 1961-2100 period, is assessed by comparing two simulations of the Canadian Land Surface Scheme (CLASS)—one with dynamic phenology, modelled using the Canadian Terrestrial Ecosystem Model (CTEM), and the other with prescribed phenology. These simulations are forced by atmospheric data from a transient climate change simulation of the 5th generation Canadian Regional Climate Model (CRCM5) for the Representative Concentration Pathway 8.5 (RCP8.5). Comparison of the CLASS coupled to CTEM simulation to available observational estimates of plant area index, spatial distribution of permafrost and active layer thickness suggests that the model captures reasonably well the overall distribution of vegetation and permafrost. It is shown that the most important impact of dynamic phenology on the land surface occurs through albedo and it is demonstrated for the first time that vegetation control on albedo during late spring and early summer has the highest potential to impact the degradation of permafrost. While both simulations show extensive near-surface permafrost degradation by the end of the twenty-first century, the strong projected response of vegetation to climate warming and increasing CO2 concentrations in the coupled simulation results in accelerated permafrost degradation in the northernmost continuous permafrost regions.

Development of Multi-Physics Dynamics Models for High-Frequency Large-Amplitude Structural Response Simulation

Science.gov (United States)

Derkevorkian, Armen; Peterson, Lee; Kolaini, Ali R.; Hendricks, Terry J.; Nesmith, Bill J.

2016-01-01

An analytic approach is demonstrated to reveal potential pyroshock -driven dynamic effects causing power losses in the Thermo -Electric (TE) module bars of the Mars Science Laboratory (MSL) Multi -Mission Radioisotope Thermoelectric Generator (MMRTG). This study utilizes high- fidelity finite element analysis with SIERRA/PRESTO codes to estimate wave propagation effects due to large -amplitude suddenly -applied pyro shock loads in the MMRTG. A high fidelity model of the TE module bar was created with approximately 30 million degrees -of-freedom (DOF). First, a quasi -static preload was applied on top of the TE module bar, then transient tri- axial acceleration inputs were simultaneously applied on the preloaded module. The applied input acceleration signals were measured during MMRTG shock qualification tests performed at the Jet Propulsion Laboratory. An explicit finite element solver in the SIERRA/PRESTO computational environment, along with a 3000 processor parallel super -computing framework at NASA -AMES, was used for the simulation. The simulation results were investigated both qualitatively and quantitatively. The predicted shock wave propagation results provide detailed structural responses throughout the TE module bar, and key insights into the dynamic response (i.e., loads, displacements, accelerations) of critical internal spring/piston compression systems, TE materials, and internal component interfaces in the MMRTG TE module bar. They also provide confidence on the viability of this high -fidelity modeling scheme to accurately predict shock wave propagation patterns within complex structures. This analytic approach is envisioned for modeling shock sensitive hardware susceptible to intense shock environments positioned near shock separation devices in modern space vehicles and systems.

Dynamic Simulations of Advanced Fuel Cycles

International Nuclear Information System (INIS)

Piet, Steven J.; Dixon, Brent W.; Jacobson, Jacob J.; Matthern, Gretchen E.; Shropshire, David E.

2011-01-01

Years of performing dynamic simulations of advanced nuclear fuel cycle options provide insights into how they could work and how one might transition from the current once-through fuel cycle. This paper summarizes those insights from the context of the 2005 objectives and goals of the U.S. Advanced Fuel Cycle Initiative (AFCI). Our intent is not to compare options, assess options versus those objectives and goals, nor recommend changes to those objectives and goals. Rather, we organize what we have learned from dynamic simulations in the context of the AFCI objectives for waste management, proliferation resistance, uranium utilization, and economics. Thus, we do not merely describe 'lessons learned' from dynamic simulations but attempt to answer the 'so what' question by using this context. The analyses have been performed using the Verifiable Fuel Cycle Simulation of Nuclear Fuel Cycle Dynamics (VISION). We observe that the 2005 objectives and goals do not address many of the inherently dynamic discriminators among advanced fuel cycle options and transitions thereof.

Target shape effects on monoenergetic GeV proton acceleration

Energy Technology Data Exchange (ETDEWEB)

Chen Min; Yu Tongpu; Pukhov, Alexander [Institut fuer Theoretische Physik I, Heinrich-Heine-Universitaet Duesseldorf, 40225 Duesseldorf (Germany); Sheng Zhengming, E-mail: pukhov@tp1.uni-duesseldorf.d [Department of Physics, Shanghai Jiao Tong University, Shanghai 200240 (China)

2010-04-15

When a circularly polarized laser pulse interacts with a foil target, there are three stages: pre-hole-boring, hole-boring and light sail acceleration. We study the electron and ion dynamics in the first stage and find the minimum foil thickness requirement for a given laser intensity. Based on this analysis, we propose using a shaped foil for ion acceleration, whose thickness varies transversely to match the laser intensity. Then, the target evolves into three regions: the acceleration, transparency and deformation regions. In the acceleration region, the target can be uniformly accelerated producing a mono-energetic and spatially collimated ion beam. Detailed numerical simulations are performed to check the feasibility and robustness of this scheme, such as the influence of shape factors and surface roughness. A GeV mono-energetic proton beam is observed in three-dimensional particle-in-cell simulations when a laser pulse with a focus intensity of 10{sup 22} W cm{sup -2} is used. The energy conversion efficiency of the laser pulse to the accelerated proton beam with the simulation parameters is more than 23%.

Target shape effects on monoenergetic GeV proton acceleration

International Nuclear Information System (INIS)

Chen Min; Yu Tongpu; Pukhov, Alexander; Sheng Zhengming

2010-01-01

When a circularly polarized laser pulse interacts with a foil target, there are three stages: pre-hole-boring, hole-boring and light sail acceleration. We study the electron and ion dynamics in the first stage and find the minimum foil thickness requirement for a given laser intensity. Based on this analysis, we propose using a shaped foil for ion acceleration, whose thickness varies transversely to match the laser intensity. Then, the target evolves into three regions: the acceleration, transparency and deformation regions. In the acceleration region, the target can be uniformly accelerated producing a mono-energetic and spatially collimated ion beam. Detailed numerical simulations are performed to check the feasibility and robustness of this scheme, such as the influence of shape factors and surface roughness. A GeV mono-energetic proton beam is observed in three-dimensional particle-in-cell simulations when a laser pulse with a focus intensity of 10 22 W cm -2 is used. The energy conversion efficiency of the laser pulse to the accelerated proton beam with the simulation parameters is more than 23%.

Computer simulations of a single-laser double-gas-jet wakefield accelerator concept

Directory of Open Access Journals (Sweden)

R. G. Hemker

2002-04-01

Full Text Available We report in this paper on full scale 2D particle-in-cell simulations investigating laser wakefield acceleration. First we describe our findings of electron beam generation by a laser propagating through a single gas jet. Using realistic parameters which are relevant for the experimental setup in our laboratory we find that the electron beam resulting after the propagation of a 0.8 μm, 50 fs laser through a 1.5 mm gas jet has properties that would make it useful for further acceleration. Our simulations show that the electron beam is generated when the laser exits the gas jet, and the properties of the generated beam, especially its energy, depend only weakly on most properties of the gas jet. We therefore propose to use the first gas jet as a plasma cathode and then use a second gas jet placed immediately behind the first to provide additional acceleration. Our simulations of this proposed setup indicate the feasibility of this idea and also suggest ways to optimize the quality of the resulting beam.

Beam manipulation techniques, nonlinear beam dynamics, and space charge effect in high energy high power accelerators

Energy Technology Data Exchange (ETDEWEB)

Lee, S. Y. [Indiana Univ., Bloomington, IN (United States)

2014-04-07

We had carried out a design of an ultimate storage ring with beam emittance less than 10 picometer for the feasibility of coherent light source at X-ray wavelength. The accelerator has an inherent small dynamic aperture. We study method to improve the dynamic aperture and collective instability for an ultimate storage ring. Beam measurement and accelerator modeling are an integral part of accelerator physics. We develop the independent component analysis (ICA) and the orbit response matrix method for improving accelerator reliability and performance. In collaboration with scientists in National Laboratories, we also carry out experimental and theoretical studies on beam dynamics. Our proposed research topics are relevant to nuclear and particle physics using high brightness particle and photon beams.

One and two dimensional simulations on beat wave acceleration

International Nuclear Information System (INIS)

Mori, W.; Joshi, C.; Dawson, J.M.; Forslund, D.W.; Kindel, J.M.

1984-01-01

Recently there has been considerable interest in the use of fast-large-amplitude plasma waves as the basis for a high energy particle accelerator. In these schemes, lasers are used to create the plasma wave. To date the few simulation studies on this subject have been limited to one-dimensional, short rise time simulations. Here the authors present results from simulations in which more realistic parameters are used. In addition, they present the first two dimensional simulations on this subject. One dimensional simulations on a 2 1/2-D relativistic electromagnetic particle code, in which only a few cells were used in one direction, on colinear optical mixing are presented. In these simulations the laser rise time, laser intensity, plasma density, plasma temperature and system size were varied. The simulations indicate that the theory of Rosenbluth and Liu is applicable over a wide range of parameters. In addition, simulations with a DC magnetic field are presented in order to study the ''Surfatron'' concept

Electric field simulation and measurement of a pulse line ion accelerator

International Nuclear Information System (INIS)

Shen Xiaokang; Zhang Zimin; Cao Shuchun; Zhao Hongwei; Zhao Quantang; Liu Ming; Jing Yi; Wang Bo; Shen Xiaoli

2012-01-01

An oil dielectric helical pulse line to demonstrate the principles of a Pulse Line Ion Accelerator (PLIA) has been designed and fabricated. The simulation of the axial electric field of an accelerator with CST code has been completed and the simulation results show complete agreement with the theoretical calculations. To fully understand the real value of the electric field excited from the helical line in PLIA, an optical electric integrated electric field measurement system was adopted. The measurement result shows that the real magnitude of axial electric field is smaller than that calculated, probably due to the actual pitch of the resister column which is much less than that of helix. (authors)

Computational needs for the RIA accelerator systems

International Nuclear Information System (INIS)

Ostroumov, P.N.; Nolen, J.A.; Mustapha, B.

2006-01-01

This paper discusses the computational needs for the full design and simulation of the RIA accelerator systems. Beam dynamics simulations are essential to first define and optimize the architectural design for both the driver linac and the post-accelerator. They are also important to study different design options and various off-normal modes in order to decide on the most-performing and cost-effective design. Due to the high-intensity primary beams, the beam-stripper interaction is a source of both radioactivation and beam contamination and should be carefully investigated and simulated for proper beam collimation and shielding. The targets and fragment separators area needs also very special attention in order to reduce any radiological hazards by careful shielding design. For all these simulations parallel computing is an absolute necessity

The Development and Comparison of Molecular Dynamics Simulation and Monte Carlo Simulation

Science.gov (United States)

Chen, Jundong

2018-03-01

Molecular dynamics is an integrated technology that combines physics, mathematics and chemistry. Molecular dynamics method is a computer simulation experimental method, which is a powerful tool for studying condensed matter system. This technique not only can get the trajectory of the atom, but can also observe the microscopic details of the atomic motion. By studying the numerical integration algorithm in molecular dynamics simulation, we can not only analyze the microstructure, the motion of particles and the image of macroscopic relationship between them and the material, but can also study the relationship between the interaction and the macroscopic properties more conveniently. The Monte Carlo Simulation, similar to the molecular dynamics, is a tool for studying the micro-molecular and particle nature. In this paper, the theoretical background of computer numerical simulation is introduced, and the specific methods of numerical integration are summarized, including Verlet method, Leap-frog method and Velocity Verlet method. At the same time, the method and principle of Monte Carlo Simulation are introduced. Finally, similarities and differences of Monte Carlo Simulation and the molecular dynamics simulation are discussed.

Collective ion acceleration by means of virtual cathodes

International Nuclear Information System (INIS)

Peter, W.; Faehl, R.J.; Snell, C.; Jones, M.E.

1985-01-01

Experiments on collective ion acceleration by means of the formation of a virtual cathode have been carried out for a number of years in the Soviet Union and in the United States. Recently, there has been renewed interest in the subject as a possible means of accelerating ions to very high energies. By understanding the physics underlying the acceleration process it may be possible to determine the feasibility of virtual cathode staging for very high energy ion production. For this reason, a theoretical and computational effort is underway at Los Alamos in order to clarify the basic issues of collective ion acceleration by means of virtual cathodes. To support the theoretical effort, simulations were done with the fully electromagnetic and relativistic particle-in-cell code ISIS (in a one-dimensional mode) and the electrostatic one-dimensional code BIGONE. In the simulations, an electron beam of density 6 x 10 11 cm -3 is injected into a one-dimensional box of length L. To supply the necessary ions for collective acceleration, a plasma source containing both ions and electrons was initialized near the emitting boundary. Of prime interest in this study was to understand the dynamics of virtual cathode formation and the dynamics of the acceleration process for the ions. In particular, the question of whether the ions are accelerated by a moving potential well or hydrodynamic pressure due to ambipolar expansion is of primary interest. 3 refs., 5 figs

Design of Accelerator Online Simulator Server Using Structured Data

International Nuclear Information System (INIS)

Shen, Guobao

2012-01-01

Model based control plays an important role for a modern accelerator during beam commissioning, beam study, and even daily operation. With a realistic model, beam behaviour can be predicted and therefore effectively controlled. The approach used by most current high level application environments is to use a built-in simulation engine and feed a realistic model into that simulation engine. Instead of this traditional monolithic structure, a new approach using a client-server architecture is under development. An on-line simulator server is accessed via network accessible structured data. With this approach, a user can easily access multiple simulation codes. This paper describes the design, implementation, and current status of PVData, which defines the structured data, and PVAccess, which provides network access to the structured data.

Microparticle accelerator of unique design. [for micrometeoroid impact and cratering simulation

Science.gov (United States)

Vedder, J. F.

1978-01-01

A microparticle accelerator has been devised for micrometeoroid impact and cratering simulation; the device produces high-velocity (0.5-15 km/sec), micrometer-sized projectiles of any cohesive material. In the source, an electrodynamic levitator, single particles are charged by ion bombardment in high vacuum. The vertical accelerator has four drift tubes, each initially at a high negative voltage. After injection of the projectile, each tube is grounded in turn at a time determined by the voltage and charge/mass ratio to give four acceleration stages with a total voltage equivalent to about 1.7 MV.

Combining molecular dynamics with mesoscopic Green’s function reaction dynamics simulations

Energy Technology Data Exchange (ETDEWEB)

Vijaykumar, Adithya, E-mail: vijaykumar@amolf.nl [FOM Institute AMOLF, Science Park 104, 1098 XG Amsterdam (Netherlands); van ’t Hoff Institute for Molecular Sciences, University of Amsterdam, P.O. Box 94157, 1090 GD Amsterdam (Netherlands); Bolhuis, Peter G. [van ’t Hoff Institute for Molecular Sciences, University of Amsterdam, P.O. Box 94157, 1090 GD Amsterdam (Netherlands); Rein ten Wolde, Pieter, E-mail: p.t.wolde@amolf.nl [FOM Institute AMOLF, Science Park 104, 1098 XG Amsterdam (Netherlands)

2015-12-07

In many reaction-diffusion processes, ranging from biochemical networks, catalysis, to complex self-assembly, the spatial distribution of the reactants and the stochastic character of their interactions are crucial for the macroscopic behavior. The recently developed mesoscopic Green’s Function Reaction Dynamics (GFRD) method enables efficient simulation at the particle level provided the microscopic dynamics can be integrated out. Yet, many processes exhibit non-trivial microscopic dynamics that can qualitatively change the macroscopic behavior, calling for an atomistic, microscopic description. We propose a novel approach that combines GFRD for simulating the system at the mesoscopic scale where particles are far apart, with a microscopic technique such as Langevin dynamics or Molecular Dynamics (MD), for simulating the system at the microscopic scale where reactants are in close proximity. This scheme defines the regions where the particles are close together and simulated with high microscopic resolution and those where they are far apart and simulated with lower mesoscopic resolution, adaptively on the fly. The new multi-scale scheme, called MD-GFRD, is generic and can be used to efficiently simulate reaction-diffusion systems at the particle level.

Combining molecular dynamics with mesoscopic Green’s function reaction dynamics simulations

International Nuclear Information System (INIS)

Vijaykumar, Adithya; Bolhuis, Peter G.; Rein ten Wolde, Pieter

2015-01-01

In many reaction-diffusion processes, ranging from biochemical networks, catalysis, to complex self-assembly, the spatial distribution of the reactants and the stochastic character of their interactions are crucial for the macroscopic behavior. The recently developed mesoscopic Green’s Function Reaction Dynamics (GFRD) method enables efficient simulation at the particle level provided the microscopic dynamics can be integrated out. Yet, many processes exhibit non-trivial microscopic dynamics that can qualitatively change the macroscopic behavior, calling for an atomistic, microscopic description. We propose a novel approach that combines GFRD for simulating the system at the mesoscopic scale where particles are far apart, with a microscopic technique such as Langevin dynamics or Molecular Dynamics (MD), for simulating the system at the microscopic scale where reactants are in close proximity. This scheme defines the regions where the particles are close together and simulated with high microscopic resolution and those where they are far apart and simulated with lower mesoscopic resolution, adaptively on the fly. The new multi-scale scheme, called MD-GFRD, is generic and can be used to efficiently simulate reaction-diffusion systems at the particle level

Soft tissue deformation for surgical simulation: a position-based dynamics approach.

Science.gov (United States)

Camara, Mafalda; Mayer, Erik; Darzi, Ara; Pratt, Philip

2016-06-01

To assist the rehearsal and planning of robot-assisted partial nephrectomy, a real-time simulation platform is presented that allows surgeons to visualise and interact with rapidly constructed patient-specific biomechanical models of the anatomical regions of interest. Coupled to a framework for volumetric deformation, the platform furthermore simulates intracorporeal 2D ultrasound image acquisition, using preoperative imaging as the data source. This not only facilitates the planning of optimal transducer trajectories and viewpoints, but can also act as a validation context for manually operated freehand 3D acquisitions and reconstructions. The simulation platform was implemented within the GPU-accelerated NVIDIA FleX position-based dynamics framework. In order to validate the model and determine material properties and other simulation parameter values, a porcine kidney with embedded fiducial beads was CT-scanned and segmented. Acquisitions for the rest position and three different levels of probe-induced deformation were collected. Optimal values of the cluster stiffness coefficients were determined for a range of different particle radii, where the objective function comprised the mean distance error between real and simulated fiducial positions over the sequence of deformations. The mean fiducial error at each deformation stage was found to be compatible with the level of ultrasound probe calibration error typically observed in clinical practice. Furthermore, the simulation exhibited unconditional stability on account of its use of clustered shape-matching constraints. A novel position-based dynamics implementation of soft tissue deformation has been shown to facilitate several desirable simulation characteristics: real-time performance, unconditional stability, rapid model construction enabling patient-specific behaviour and accuracy with respect to reference CT images.

Beam dynamics study of a 30 MeV electron linear accelerator to drive a neutron source

Energy Technology Data Exchange (ETDEWEB)

Kumar, Sandeep; Yang, Haeryong; Kang, Heung-Sik, E-mail: hskang@postech.ac.kr [Pohang Accelerator Laboratory, San31, Hyoja-dong, Pohang, Gyeongbuk 790-784 (Korea, Republic of)

2014-02-14

An experimental neutron facility based on 32 MeV/18.47 kW electron linac has been studied by means of PARMELA simulation code. Beam dynamics study for a traveling wave constant gradient electron accelerator is carried out to reach the preferential operation parameters (E = 30 MeV, P = 18 kW, dE/E < 12.47% for 99% particles). The whole linac comprises mainly E-gun, pre-buncher, buncher, and 2 accelerating columns. A disk-loaded, on-axis-coupled, 2π/3-mode type accelerating rf cavity is considered for this linac. After numerous optimizations of linac parameters, 32 MeV beam energy is obtained at the end of the linac. As high electron energy is required to produce acceptable neutron flux. The final neutron flux is estimated to be 5 × 10{sup 11} n/cm{sup 2}/s/mA. Future development will be the real design of a 30 MeV electron linac based on S band traveling wave.

Calculation of the MT25 microtron dynamics and its fast simulation

International Nuclear Information System (INIS)

Krist, Pavel; Chvatil, David; Bila, Jiri

2011-01-01

This paper presents the design of a mathematical model and its fast simulation developed for the setup of the control system of the MT25 microtron, which is a cyclic electron accelerator. This type of accelerator has been controlled manually until now. The mathematical model is based on calculations of the electron motion in the accelerating cavity and vacuum chamber. The simulation diagram was created using the Matlab-Simulink tools. (author)

GPU accelerated flow solver for direct numerical simulation of turbulent flows

Energy Technology Data Exchange (ETDEWEB)

Salvadore, Francesco [CASPUR – via dei Tizii 6/b, 00185 Rome (Italy); Bernardini, Matteo, E-mail: matteo.bernardini@uniroma1.it [Department of Mechanical and Aerospace Engineering, University of Rome ‘La Sapienza’ – via Eudossiana 18, 00184 Rome (Italy); Botti, Michela [CASPUR – via dei Tizii 6/b, 00185 Rome (Italy)

2013-02-15

Graphical processing units (GPUs), characterized by significant computing performance, are nowadays very appealing for the solution of computationally demanding tasks in a wide variety of scientific applications. However, to run on GPUs, existing codes need to be ported and optimized, a procedure which is not yet standardized and may require non trivial efforts, even to high-performance computing specialists. In the present paper we accurately describe the porting to CUDA (Compute Unified Device Architecture) of a finite-difference compressible Navier–Stokes solver, suitable for direct numerical simulation (DNS) of turbulent flows. Porting and validation processes are illustrated in detail, with emphasis on computational strategies and techniques that can be applied to overcome typical bottlenecks arising from the porting of common computational fluid dynamics solvers. We demonstrate that a careful optimization work is crucial to get the highest performance from GPU accelerators. The results show that the overall speedup of one NVIDIA Tesla S2070 GPU is approximately 22 compared with one AMD Opteron 2352 Barcelona chip and 11 compared with one Intel Xeon X5650 Westmere core. The potential of GPU devices in the simulation of unsteady three-dimensional turbulent flows is proved by performing a DNS of a spatially evolving compressible mixing layer.

Electron linear accelerator system for natural rubber vulcanization

Science.gov (United States)

Rimjaem, S.; Kongmon, E.; Rhodes, M. W.; Saisut, J.; Thongbai, C.

2017-09-01

Development of an electron accelerator system, beam diagnostic instruments, an irradiation apparatus and electron beam processing methodology for natural rubber vulcanization is underway at the Plasma and Beam Physics Research Facility, Chiang Mai University, Thailand. The project is carried out with the aims to improve the qualities of natural rubber products. The system consists of a DC thermionic electron gun, 5-cell standing-wave radio-frequency (RF) linear accelerator (linac) with side-coupling cavities and an electron beam irradiation apparatus. This system is used to produce electron beams with an adjustable energy between 0.5 and 4 MeV and a pulse current of 10-100 mA at a pulse repetition rate of 20-400 Hz. An average absorbed dose between 160 and 640 Gy is expected to be archived for 4 MeV electron beam when the accelerator is operated at 400 Hz. The research activities focus firstly on assembling of the accelerator system, study on accelerator properties and electron beam dynamic simulations. The resonant frequency of the RF linac in π/2 operating mode is 2996.82 MHz for the operating temperature of 35 °C. The beam dynamic simulations were conducted by using the code ASTRA. Simulation results suggest that electron beams with an average energy of 4.002 MeV can be obtained when the linac accelerating gradient is 41.7 MV/m. The rms transverse beam size and normalized rms transverse emittance at the linac exit are 0.91 mm and 10.48 π mm·mrad, respectively. This information can then be used as the input data for Monte Carlo simulations to estimate the electron beam penetration depth and dose distribution in the natural rubber latex. The study results from this research will be used to define optimal conditions for natural rubber vulcanization with different electron beam energies and doses. This is very useful for development of future practical industrial accelerator units.

Calculations of beam dynamics in Sandia linear electron accelerators, 1984

International Nuclear Information System (INIS)

Poukey, J.W.; Coleman, P.D.

1985-03-01

A number of code and analytic studies were made during 1984 which pertain to the Sandia linear accelerators MABE and RADLAC. In this report the authors summarize the important results of the calculations. New results include a better understanding of gap-induced radial oscillations, leakage currents in a typical MABE gas, emittance growth in a beam passing through a series of gaps, some new diocotron results, and the latest diode simulations for both accelerators. 23 references, 30 figures, 1 table

Fluctuation Flooding Method (FFM) for accelerating conformational transitions of proteins

Science.gov (United States)

Harada, Ryuhei; Takano, Yu; Shigeta, Yasuteru

2014-03-01

A powerful conformational sampling method for accelerating structural transitions of proteins, "Fluctuation Flooding Method (FFM)," is proposed. In FFM, cycles of the following steps enhance the transitions: (i) extractions of largely fluctuating snapshots along anisotropic modes obtained from trajectories of multiple independent molecular dynamics (MD) simulations and (ii) conformational re-sampling of the snapshots via re-generations of initial velocities when re-starting MD simulations. In an application to bacteriophage T4 lysozyme, FFM successfully accelerated the open-closed transition with the 6 ns simulation starting solely from the open state, although the 1-μs canonical MD simulation failed to sample such a rare event.

Particle-in-cell simulation of x-ray wakefield acceleration and betatron radiation in nanotubes

Directory of Open Access Journals (Sweden)

Xiaomei Zhang

2016-10-01

Full Text Available Though wakefield acceleration in crystal channels has been previously proposed, x-ray wakefield acceleration has only recently become a realistic possibility since the invention of the single-cycled optical laser compression technique. We investigate the acceleration due to a wakefield induced by a coherent, ultrashort x-ray pulse guided by a nanoscale channel inside a solid material. By two-dimensional particle-in-cell computer simulations, we show that an acceleration gradient of TeV/cm is attainable. This is about 3 orders of magnitude stronger than that of the conventional plasma-based wakefield accelerations, which implies the possibility of an extremely compact scheme to attain ultrahigh energies. In addition to particle acceleration, this scheme can also induce the emission of high energy photons at ∼O(10–100  MeV. Our simulations confirm such high energy photon emissions, which is in contrast with that induced by the optical laser driven wakefield scheme. In addition to this, the significantly improved emittance of the energetic electrons has been discussed.

Poisson simulation for high voltage terminal of test stand for 1MV electrostatic accelerator

Energy Technology Data Exchange (ETDEWEB)

Park, Sae-Hoon; Kim, Jeong-Tae; Kwon, Hyeok-Jung; Cho, Yong-Sub [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of); Kim, Yu-Seok [Dongguk Univ.., Gyeongju (Korea, Republic of)

2014-10-15

KOMAC provide ion beam to user which energy range need to expand to MeV range and develop 1 MV electrostatic accelerator. The specifications of the electrostatic accelerator are 1MV acceleration voltage, 10 mA peak current and variable gas ion. We are developing test stand before set up 1 MV electrostatic accelerator. The test stand voltage is 300 kV and operating time is 8 hours. The test stand is consist of 300 kV high voltage terminal, DC-AC-DC inverter, power supply device inside terminal, 200MHz RF power, 5 kV extraction power supply, 300 kV accelerating tube and vacuum system.. The beam measurement system and beam dump will be installed next to accelerating tube. Poisson code simulation results of the high voltage terminal are presented in this paper. Poisson code has been used to calculate the electric field for high voltage terminal. The results of simulation were verified with reasonable results. The poisson code structure could be apply to the high voltage terminal of the test stand.

Poisson simulation for high voltage terminal of test stand for 1MV electrostatic accelerator

International Nuclear Information System (INIS)

Park, Sae-Hoon; Kim, Jeong-Tae; Kwon, Hyeok-Jung; Cho, Yong-Sub; Kim, Yu-Seok

2014-01-01

KOMAC provide ion beam to user which energy range need to expand to MeV range and develop 1 MV electrostatic accelerator. The specifications of the electrostatic accelerator are 1MV acceleration voltage, 10 mA peak current and variable gas ion. We are developing test stand before set up 1 MV electrostatic accelerator. The test stand voltage is 300 kV and operating time is 8 hours. The test stand is consist of 300 kV high voltage terminal, DC-AC-DC inverter, power supply device inside terminal, 200MHz RF power, 5 kV extraction power supply, 300 kV accelerating tube and vacuum system.. The beam measurement system and beam dump will be installed next to accelerating tube. Poisson code simulation results of the high voltage terminal are presented in this paper. Poisson code has been used to calculate the electric field for high voltage terminal. The results of simulation were verified with reasonable results. The poisson code structure could be apply to the high voltage terminal of the test stand

Numerical simulation for the accelerator of the KSTAR neutral beam ion source

International Nuclear Information System (INIS)

Kim, Tae-Seong; Jeong, Seung Ho; In, Sang Ryul

2010-01-01

Recent experiments with a prototype long-pulse, high-current ion source being developed for the neutral beam injection system of the Korea Superconducting Tokamak Advanced Research have shown that the accelerator grid assembly needs a further upgrade to achieve the final goal of 120keV/65A for the deuterium ion beam. The accelerator upgrade concept was determined theoretically by simulations using the IGUN code. The simulation study was focused on finding parameter sets that raise the optimum perveance as large as possible and reduce the beam divergence as low as possible. From the simulation results, it was concluded that it is possible to achieve this goal by sliming the plasma grid (G1), shortening the second gap (G2-G3), and adjusting the G2 voltage ratio.

Monte Carlo simulations and benchmark studies at CERN's accelerator chain

CERN Document Server

AUTHOR|(CDS)2083190; Brugger, Markus

2016-01-01

Mixed particle and energy radiation fields present at the Large Hadron Collider (LHC) and its accelerator chain are responsible for failures on electronic devices located in the vicinity of the accelerator beam lines. These radiation effects on electronics and, more generally, the overall radiation damage issues have a direct impact on component and system lifetimes, as well as on maintenance requirements and radiation exposure to personnel who have to intervene and fix existing faults. The radiation environments and respective radiation damage issues along the CERN’s accelerator chain were studied in the framework of the CERN Radiation to Electronics (R2E) project and are hereby presented. The important interplay between Monte Carlo simulations and radiation monitoring is also highlighted.

Research and simulation of intense pulsed beam transfer in electrostatic accelerate tube

International Nuclear Information System (INIS)

Li Chaolong; Shi Haiquan; Lu Jianqin

2012-01-01

To study intense pulsed beam transfer in electrostatic accelerate tube, the matrix method was applied to analyze the transport matrixes in electrostatic accelerate tube of non-intense pulsed beam and intense pulsed beam, and a computer code was written for the intense pulsed beam transporting in electrostatic accelerate tube. Optimization techniques were used to attain the given optical conditions and iteration procedures were adopted to compute intense pulsed beam for obtaining self-consistent solutions in this computer code. The calculations were carried out by using ACCT, TRACE-3D and TRANSPORT for different beam currents, respectively. The simulation results show that improvement of the accelerating voltage ratio can enhance focusing power of electrostatic accelerate tube, reduce beam loss and increase the transferring efficiency. (authors)

Model Independent Analysis of Beam Centroid Dynamics in Accelerators

International Nuclear Information System (INIS)

Wang, Chun-xi

2003-01-01

Fundamental issues in Beam-Position-Monitor (BPM)-based beam dynamics observations are studied in this dissertation. The major topic is the Model-Independent Analysis (MIA) of beam centroid dynamics. Conventional beam dynamics analysis requires a certain machine model, which itself of ten needs to be refined by beam measurements. Instead of using any particular machine model, MIA relies on a statistical analysis of the vast amount of BPM data that often can be collected non-invasively during normal machine operation. There are two major parts in MIA. One is noise reduction and degrees-of-freedom analysis using a singular value decomposition of a BPM-data matrix, which constitutes a principal component analysis of BPM data. The other is a physical base decomposition of the BPM-data matrix based on the time structure of pulse-by-pulse beam and/or machine parameters. The combination of these two methods allows one to break the resolution limit set by individual BPMs and observe beam dynamics at more accurate levels. A physical base decomposition is particularly useful for understanding various beam dynamics issues. MIA improves observation and analysis of beam dynamics and thus leads to better understanding and control of beams in both linacs and rings. The statistical nature of MIA makes it potentially useful in other fields. Another important topic discussed in this dissertation is the measurement of a nonlinear Poincare section (one-turn) map in circular accelerators. The beam dynamics in a ring is intrinsically nonlinear. In fact, nonlinearities are a major factor that limits stability and influences the dynamics of halos. The Poincare section map plays a basic role in characterizing and analyzing such a periodic nonlinear system. Although many kinds of nonlinear beam dynamics experiments have been conducted, no direct measurement of a nonlinear map has been reported for a ring in normal operation mode. This dissertation analyzes various issues concerning map

Model Independent Analysis of Beam Centroid Dynamics in Accelerators

Energy Technology Data Exchange (ETDEWEB)

Wang, Chun-xi

2003-04-21

Fundamental issues in Beam-Position-Monitor (BPM)-based beam dynamics observations are studied in this dissertation. The major topic is the Model-Independent Analysis (MIA) of beam centroid dynamics. Conventional beam dynamics analysis requires a certain machine model, which itself of ten needs to be refined by beam measurements. Instead of using any particular machine model, MIA relies on a statistical analysis of the vast amount of BPM data that often can be collected non-invasively during normal machine operation. There are two major parts in MIA. One is noise reduction and degrees-of-freedom analysis using a singular value decomposition of a BPM-data matrix, which constitutes a principal component analysis of BPM data. The other is a physical base decomposition of the BPM-data matrix based on the time structure of pulse-by-pulse beam and/or machine parameters. The combination of these two methods allows one to break the resolution limit set by individual BPMs and observe beam dynamics at more accurate levels. A physical base decomposition is particularly useful for understanding various beam dynamics issues. MIA improves observation and analysis of beam dynamics and thus leads to better understanding and control of beams in both linacs and rings. The statistical nature of MIA makes it potentially useful in other fields. Another important topic discussed in this dissertation is the measurement of a nonlinear Poincare section (one-turn) map in circular accelerators. The beam dynamics in a ring is intrinsically nonlinear. In fact, nonlinearities are a major factor that limits stability and influences the dynamics of halos. The Poincare section map plays a basic role in characterizing and analyzing such a periodic nonlinear system. Although many kinds of nonlinear beam dynamics experiments have been conducted, no direct measurement of a nonlinear map has been reported for a ring in normal operation mode. This dissertation analyzes various issues concerning map

A Framework for Dynamically-Loaded Hardware Library (HLL) in FPGA Acceleration

DEFF Research Database (Denmark)

Cardarilli, Gian Carlo; Di Carlo, Leonardo; Nannarelli, Alberto

2016-01-01

Hardware acceleration is often used to address the need for speed and computing power in embedded systems. FPGAs always represented a good solution for HW acceleration and, recently, new SoC platforms extended the flexibility of the FPGAs by combining on a single chip both high-performance CPUs...... and FPGA fabric. The aim of this work is the implementation of hardware accelerators for these new SoCs. The innovative feature of these accelerators is the on-the-fly reconfiguration of the hardware to dynamically adapt the accelerator’s functionalities to the current CPU workload. The realization...... of the accelerators preliminarily requires also the profiling of both the SW (ARM CPU + NEON Units) and HW (FPGA) performance, an evaluation of the partial reconfiguration times and the development of an applicationspecific IP-cores library. This paper focuses on the profiling aspect of both the SW and HW...

A Method to Simulate Linear Stability of Impulsively Accelerated Density Interfaces in Ideal-MHD and Gas Dynamics

International Nuclear Information System (INIS)

Samtaney, Ravi

2009-01-01

We present a numerical method to solve the linear stability of impulsively accelerated density interfaces in two dimensions such as those arising in the Richtmyer-Meshkov instability. The method uses an Eulerian approach, and is based on an unwind method to compute the temporally evolving base state and a flux vector splitting method for the perturbations. The method is applicable to either gas dynamics or magnetohydrodynamics. Numerical examples are presented for cases in which a hydrodynamic shock interacts with a single or double density interface, and a doubly shocked single density interface. Convergence tests show that the method is spatially second order accurate for smooth flows, and between first and second order accurate for flows with shocks

Experiment and simulation study on unidirectional carbon fiber composite component under dynamic 3 point bending loading

Energy Technology Data Exchange (ETDEWEB)

Zhou, Guowei; Sun, Qingping; Zeng, Danielle; Li, Dayong; Su, Xuming

2018-04-10

In current work, unidirectional (UD) carbon fiber composite hatsection component with two different layups are studied under dynamic 3 point bending loading. The experiments are performed at various impact velocities, and the effects of impactor velocity and layup on acceleration histories are compared. A macro model is established with LS-Dyna for more detailed study. The simulation results show that the delamination plays an important role during dynamic 3 point bending test. Based on the analysis with high speed camera, the sidewall of hatsection shows significant buckling rather than failure. Without considering the delamination, current material model cannot capture the post failure phenomenon correctly. The sidewall delamination is modeled by assumption of larger failure strain together with slim parameters, and the simulation results of different impact velocities and layups match the experimental results reasonable well.

HTTR plant dynamic simulation using a hybrid computer

International Nuclear Information System (INIS)

Shimazaki, Junya; Suzuki, Katsuo; Nabeshima, Kunihiko; Watanabe, Koichi; Shinohara, Yoshikuni; Nakagawa, Shigeaki.

1990-01-01

A plant dynamic simulation of High-Temperature Engineering Test Reactor has been made using a new-type hybrid computer. This report describes a dynamic simulation model of HTTR, a hybrid simulation method for SIMSTAR and some results obtained from dynamics analysis of HTTR simulation. It concludes that the hybrid plant simulation is useful for on-line simulation on account of its capability of computation at high speed, compared with that of all digital computer simulation. With sufficient accuracy, 40 times faster computation than real time was reached only by changing an analog time scale for HTTR simulation. (author)

Computationally efficient dynamic modeling of robot manipulators with multiple flexible-links using acceleration-based discrete time transfer matrix method

DEFF Research Database (Denmark)

Zhang, Xuping; Sørensen, Rasmus; RahbekIversen, Mathias

2018-01-01

, and then is linearized based on the acceleration-based state vector. The transfer matrices for each type of components/elements are developed, and used to establish the system equations of a flexible robot manipulator by concatenating the state vector from the base to the end-effector. With this strategy, the size...... manipulators, and only involves calculating and transferring component/element dynamic equations that have small size. The numerical simulations and experimental testing of flexible-link manipulators are conducted to validate the proposed methodologies....

Structure of sheared and rotating turbulence: Multiscale statistics of Lagrangian and Eulerian accelerations and passive scalar dynamics.

Science.gov (United States)

Jacobitz, Frank G; Schneider, Kai; Bos, Wouter J T; Farge, Marie

2016-01-01

The acceleration statistics of sheared and rotating homogeneous turbulence are studied using direct numerical simulation results. The statistical properties of Lagrangian and Eulerian accelerations are considered together with the influence of the rotation to shear ratio, as well as the scale dependence of their statistics. The probability density functions (pdfs) of both Lagrangian and Eulerian accelerations show a strong and similar dependence on the rotation to shear ratio. The variance and flatness of both accelerations are analyzed and the extreme values of the Eulerian acceleration are observed to be above those of the Lagrangian acceleration. For strong rotation it is observed that flatness yields values close to three, corresponding to Gaussian-like behavior, and for moderate and vanishing rotation the flatness increases. Furthermore, the Lagrangian and Eulerian accelerations are shown to be strongly correlated for strong rotation due to a reduced nonlinear term in this case. A wavelet-based scale-dependent analysis shows that the flatness of both Eulerian and Lagrangian accelerations increases as scale decreases, which provides evidence for intermittent behavior. For strong rotation the Eulerian acceleration is even more intermittent than the Lagrangian acceleration, while the opposite result is obtained for moderate rotation. Moreover, the dynamics of a passive scalar with gradient production in the direction of the mean velocity gradient is analyzed and the influence of the rotation to shear ratio is studied. Concerning the concentration of a passive scalar spread by the flow, the pdf of its Eulerian time rate of change presents higher extreme values than those of its Lagrangian time rate of change. This suggests that the Eulerian time rate of change of scalar concentration is mainly due to advection, while its Lagrangian counterpart is only due to gradient production and viscous dissipation.

Computationally efficient dynamic modeling of robot manipulators with multiple flexible-links using acceleration-based discrete time transfer matrix method

DEFF Research Database (Denmark)

Zhang, Xuping; Sørensen, Rasmus; RahbekIversen, Mathias

2018-01-01

This paper presents a novel and computationally efficient modeling method for the dynamics of flexible-link robot manipulators. In this method, a robot manipulator is decomposed into components/elements. The component/element dynamics is established using Newton–Euler equations, and then is linea......This paper presents a novel and computationally efficient modeling method for the dynamics of flexible-link robot manipulators. In this method, a robot manipulator is decomposed into components/elements. The component/element dynamics is established using Newton–Euler equations......, and then is linearized based on the acceleration-based state vector. The transfer matrices for each type of components/elements are developed, and used to establish the system equations of a flexible robot manipulator by concatenating the state vector from the base to the end-effector. With this strategy, the size...... manipulators, and only involves calculating and transferring component/element dynamic equations that have small size. The numerical simulations and experimental testing of flexible-link manipulators are conducted to validate the proposed methodologies....

3D ion-scale dynamics of BBFs and their associated emissions in Earth's magnetotail using 3D hybrid simulations and MMS multi-spacecraft observations

Science.gov (United States)

Breuillard, H.; Aunai, N.; Le Contel, O.; Catapano, F.; Alexandrova, A.; Retino, A.; Cozzani, G.; Gershman, D. J.; Giles, B. L.; Khotyaintsev, Y. V.; Lindqvist, P. A.; Ergun, R.; Strangeway, R. J.; Russell, C. T.; Magnes, W.; Plaschke, F.; Nakamura, R.; Fuselier, S. A.; Turner, D. L.; Schwartz, S. J.; Torbert, R. B.; Burch, J.

2017-12-01

Transient and localized jets of hot plasma, also known as Bursty Bulk Flows (BBFs), play a crucial role in Earth's magnetotail dynamics because the energy input from the solar wind is partly dissipated in their vicinity, notably in their embedded dipolarization front (DF). This dissipation is in the form of strong low-frequency waves that can heat and accelerate energetic particles up to the high-latitude plasma sheet. The ion-scale dynamics of BBFs have been revealed by the Cluster and THEMIS multi-spacecraft missions. However, the dynamics of BBF propagation in the magnetotail are still under debate due to instrumental limitations and spacecraft separation distances, as well as simulation limitations. The NASA/MMS fleet, which features unprecedented high time resolution instruments and four spacecraft separated by kinetic-scale distances, has also shown recently that the DF normal dynamics and its associated emissions are below the ion gyroradius scale in this region. Large variations in the dawn-dusk direction were also observed. However, most of large-scale simulations are using the MHD approach and are assumed 2D in the XZ plane. Thus, in this study we take advantage of both multi-spacecraft observations by MMS and large-scale 3D hybrid simulations to investigate the 3D dynamics of BBFs and their associated emissions at ion-scale in Earth's magnetotail, and their impact on particle heating and acceleration.

Simulation of density measurements in plasma wakefields using photo acceleration

CERN Document Server

Kasim, Muhammad Firmansyah; Ceurvorst, Luke; Sadler, James; Burrows, Philip N; Trines, Raoul; Holloway, James; Wing, Matthew; Bingham, Robert; Norreys, Peter

2015-01-01

One obstacle in plasma accelerator development is the limitation of techniques to diagnose and measure plasma wakefield parameters. In this paper, we present a novel concept for the density measurement of a plasma wakefield using photon acceleration, supported by extensive particle in cell simulations of a laser pulse that copropagates with a wakefield. The technique can provide the perturbed electron density profile in the laser’s reference frame, averaged over the propagation length, to be accurate within 10%. We discuss the limitations that affect the measurement: small frequency changes, photon trapping, laser displacement, stimulated Raman scattering, and laser beam divergence. By considering these processes, one can determine the optimal parameters of the laser pulse and its propagation length. This new technique allows a characterization of the density perturbation within a plasma wakefield accelerator.

High Fidelity, “Faster than Real-Time” Simulator for Predicting Power System Dynamic Behavior - Final Technical Report

Energy Technology Data Exchange (ETDEWEB)

Flueck, Alex [Illinois Inst. of Technology, Chicago, IL (United States)

2017-07-14

The “High Fidelity, Faster than Real­Time Simulator for Predicting Power System Dynamic Behavior” was designed and developed by Illinois Institute of Technology with critical contributions from Electrocon International, Argonne National Laboratory, Alstom Grid and McCoy Energy. Also essential to the project were our two utility partners: Commonwealth Edison and AltaLink. The project was a success due to several major breakthroughs in the area of large­scale power system dynamics simulation, including (1) a validated faster than real­ time simulation of both stable and unstable transient dynamics in a large­scale positive sequence transmission grid model, (2) a three­phase unbalanced simulation platform for modeling new grid devices, such as independently controlled single­phase static var compensators (SVCs), (3) the world’s first high fidelity three­phase unbalanced dynamics and protection simulator based on Electrocon’s CAPE program, and (4) a first­of­its­ kind implementation of a single­phase induction motor model with stall capability. The simulator results will aid power grid operators in their true time of need, when there is a significant risk of cascading outages. The simulator will accelerate performance and enhance accuracy of dynamics simulations, enabling operators to maintain reliability and steer clear of blackouts. In the long­term, the simulator will form the backbone of the newly conceived hybrid real­time protection and control architecture that will coordinate local controls, wide­area measurements, wide­area controls and advanced real­time prediction capabilities. The nation’s citizens will benefit in several ways, including (1) less down time from power outages due to the faster­than­real­time simulator’s predictive capability, (2) higher levels of reliability due to the detailed dynamics plus protection simulation capability, and (3) more resiliency due to the three­ phase unbalanced simulator’s ability to

GeNN: a code generation framework for accelerated brain simulations

Science.gov (United States)

Yavuz, Esin; Turner, James; Nowotny, Thomas

2016-01-01

Large-scale numerical simulations of detailed brain circuit models are important for identifying hypotheses on brain functions and testing their consistency and plausibility. An ongoing challenge for simulating realistic models is, however, computational speed. In this paper, we present the GeNN (GPU-enhanced Neuronal Networks) framework, which aims to facilitate the use of graphics accelerators for computational models of large-scale neuronal networks to address this challenge. GeNN is an open source library that generates code to accelerate the execution of network simulations on NVIDIA GPUs, through a flexible and extensible interface, which does not require in-depth technical knowledge from the users. We present performance benchmarks showing that 200-fold speedup compared to a single core of a CPU can be achieved for a network of one million conductance based Hodgkin-Huxley neurons but that for other models the speedup can differ. GeNN is available for Linux, Mac OS X and Windows platforms. The source code, user manual, tutorials, Wiki, in-depth example projects and all other related information can be found on the project website http://genn-team.github.io/genn/.

Initial Conditions Corresponding to Optimal Ion Acceleration in the VINCY Cyclotron

International Nuclear Information System (INIS)

Ilic, A. Z.; Ristic-Djurovic, J. L.; Cirkovic, S. T.

2007-01-01

The quality of a beam in a cyclotron depends a lot on the choice of initial conditions for acceleration. The criteria defining optimal acceleration as well as the choice of the corresponding initial conditions have been outlined. The results of beam dynamics simulations with optimal and non-optimal initial conditions are compared. (author)

Accelerating Molecular Dynamic Simulation on Graphics Processing Units

Science.gov (United States)

Friedrichs, Mark S.; Eastman, Peter; Vaidyanathan, Vishal; Houston, Mike; Legrand, Scott; Beberg, Adam L.; Ensign, Daniel L.; Bruns, Christopher M.; Pande, Vijay S.

2009-01-01

We describe a complete implementation of all-atom protein molecular dynamics running entirely on a graphics processing unit (GPU), including all standard force field terms, integration, constraints, and implicit solvent. We discuss the design of our algorithms and important optimizations needed to fully take advantage of a GPU. We evaluate its performance, and show that it can be more than 700 times faster than a conventional implementation running on a single CPU core. PMID:19191337

Using Equation-Free Computation to Accelerate Network-Free Stochastic Simulation of Chemical Kinetics.

Science.gov (United States)

Lin, Yen Ting; Chylek, Lily A; Lemons, Nathan W; Hlavacek, William S

2018-06-21

The chemical kinetics of many complex systems can be concisely represented by reaction rules, which can be used to generate reaction events via a kinetic Monte Carlo method that has been termed network-free simulation. Here, we demonstrate accelerated network-free simulation through a novel approach to equation-free computation. In this process, variables are introduced that approximately capture system state. Derivatives of these variables are estimated using short bursts of exact stochastic simulation and finite differencing. The variables are then projected forward in time via a numerical integration scheme, after which a new exact stochastic simulation is initialized and the whole process repeats. The projection step increases efficiency by bypassing the firing of numerous individual reaction events. As we show, the projected variables may be defined as populations of building blocks of chemical species. The maximal number of connected molecules included in these building blocks determines the degree of approximation. Equation-free acceleration of network-free simulation is found to be both accurate and efficient.

Beam dynamics studies of the Heavy Ion Fusion Accelerator injector

International Nuclear Information System (INIS)

Henestroza, E.; Yu, S.S.; Eylon, S.

1995-04-01

A driver-scale injector for the Heavy Ion Fusion Accelerator project has been built at LBL. This machine has exceeded the design goals of high voltage (> 2 MV), high current (> 0.8 A of K + ) and low normalized emittance (< 1 π mm-mr). The injector consists of a 750 keV diode pre-injector followed by an electrostatic quadrupole accelerator (ESQ) which provides strong (alternating gradient) focusing for the space-charge dominated beam and simultaneously accelerates the ions to 2 MeV. The fully 3-D PIC code WARP together with EGUN and POISSON were used to design the machine and analyze measurements of voltage, current and phase space distributions. A comparison between beam dynamics characteristics as measured for the injector and corresponding computer calculations will be presented

The programme library for numerical simulation of charged particle dynamics in transportation lines

International Nuclear Information System (INIS)

Aleksandrov, V.S.; Shevtsov, V.F.; Shirkov, G.D.; Batygin, Yu.K.

1998-01-01

The description of a PC codes library to simulate the beam transportation of charged particles is presented. The codes are realized on IBM PC in Visual Basic common interface. It is destined for the simulation and optimization of beam dynamics and based on the successive and consistent use of two methods: the momentum method of distribution functions (RMS technique) and the particle-particle method (PP-Method). The library allows to calculate the RMS parameters of electron and ion beams, passing through a set of quadrupoles, solenoids, bends, accelerating sections. The RMS code is a fast code very suitable for the first test, design and optimization of the beam line parameters. The PP code requires more time for execution but provides a high accuracy of simulation taking into account the space charge effects, aberrations and beam losses. One of the main advantages of PP code presented here is an ability to simulate a real multicomponent beam of different masses and charged states of ions from ion sources

An approach to incorporate the detonation shock dynamics into the calculation of explosive acceleration of metals

International Nuclear Information System (INIS)

Li Qingzhong; Sun Chengwei; Zhao Feng; Gao Wen; Wen Shanggang; Liu Wenhan

1999-11-01

The generalized geometrical optics model for the detonation shock dynamics (DSD) has been incorporated into the two dimensional hydro-code WSU to form a combination code ADW for numerical simulation of explosive acceleration of metals. An analytical treatment of the coupling conditions at the nodes just behind the detonation front is proposed. The experiments on two kinds of explosive-flyer assemblies with different length/diameter ratio were carried out to verify the ADW calculations, where the tested explosive was HMX or TATB based. It is found that the combination of DSD and hydro-code can improve the calculation precision, and has advantages in larger meshes and less CPU time

Testing of Composite Fan Vanes With Erosion-Resistant Coating Accelerated

Science.gov (United States)

Bowman, Cheryl L.; Sutter, James K.; Otten, Kim D.; Samorezov, Sergey; Perusek, Gail P.

2004-01-01

The high-cycle fatigue of composite stator vanes provided an accelerated life-state prior to insertion in a test stand engine. The accelerated testing was performed in the Structural Dynamics Laboratory at the NASA Glenn Research Center under the guidance of Structural Mechanics and Dynamics Branch personnel. Previous research on fixturing and test procedures developed at Glenn determined that engine vibratory conditions could be simulated for polymer matrix composite vanes by using the excitation of a combined slip table and electrodynamic shaker in Glenn's Structural Dynamics Laboratory. Bench-top testing gave researchers the confidence to test the coated vanes in a full-scale engine test.

Particle-in-cell/accelerator code for space-charge dominated beam simulation

Energy Technology Data Exchange (ETDEWEB)

2012-05-08

Warp is a multidimensional discrete-particle beam simulation program designed to be applicable where the beam space-charge is non-negligible or dominant. It is being developed in a collaboration among LLNL, LBNL and the University of Maryland. It was originally designed and optimized for heave ion fusion accelerator physics studies, but has received use in a broader range of applications, including for example laser wakefield accelerators, e-cloud studies in high enery accelerators, particle traps and other areas. At present it incorporates 3-D, axisymmetric (r,z) planar (x-z) and transverse slice (x,y) descriptions, with both electrostatic and electro-magnetic fields, and a beam envelope model. The code is guilt atop the Python interpreter language.

Monte Carlo simulation of the Varian Clinac 600C accelerator using dynamic wedges; Simulacao Monte Carlo do acelerador Varian Clinac 600C utilizando cunhas dinamicas

Energy Technology Data Exchange (ETDEWEB)

Moreno, S. [Universidade da Beira Interior (UBI), Covilha (Portugal); Chaves, A.; Lopes, M.C. [Instituto Portugues de Oncologia Doutor Francisco Gentil (IPO), Coimbra (Portugal); Peralta, L. [Laboratorio de Instrumentacao e Fisica Experimental de Particulas (LIP), Lisboa (Portugal)]|[Universidade de Lisboa (Portugal). Faculdade de Ciencias

2004-07-01

The advent of linear accelerators (linac) with computer-controlled dynamic collimation systems and functional and anatomical imaging techniques allowed a more exact delimitation and localisation of the target volume. These advanced treatment techniques inevitably increase the complexity level of dose calculation because of the introduction of the temporal variable. On account of this, it is mandatory the usage of more accurate modelling techniques of the collimator components, as it is the case of Monte Carlo (MC) simulation, which has created an enormous interest in research and clinical practice. Because the patients bodies are not homogenous nor are their body surfaces plane and regular, the dose distribution may differ significantly from the standard distribution from the linac calibration. It is in the treatment planning systems, which include algorithms that are usually measured in homogeneous water phantoms specific for each correction that the dose distributions from each case are obtained. In a real treatment, exception made to superficial lesions, two or more radiation fields are used in order to obtain the recommended dose distributions. The simplest arrangement is made from two parallel and opposed fields that originate a homogeneous dose distribution in almost all the irradiated volume. The available resources are, for example, different types of energies and of radiation, the application of bolus, the protection of healthy structures, the usage of wedged filters and the application of dynamic wedges. A virtual or dynamic wedge, modelled through the movement of one of the jaws, when compared with a set of physical wedges offers an alternative calculation method of an arbitrary number of wedged fields, instead of the four traditional fields of 15 deg, 30 deg, 45 deg and 60 deg angle and obtained with physical wedges. The goal of this work consists in the study of the application of dynamic wedges in tailoring the radiation field by the Varian Clinac 600

Laser-wakefield accelerators for medical phase contrast imaging: Monte Carlo simulations and experimental studies

Science.gov (United States)

Cipiccia, S.; Reboredo, D.; Vittoria, Fabio A.; Welsh, G. H.; Grant, P.; Grant, D. W.; Brunetti, E.; Wiggins, S. M.; Olivo, A.; Jaroszynski, D. A.

2015-05-01

X-ray phase contrast imaging (X-PCi) is a very promising method of dramatically enhancing the contrast of X-ray images of microscopic weakly absorbing objects and soft tissue, which may lead to significant advancement in medical imaging with high-resolution and low-dose. The interest in X-PCi is giving rise to a demand for effective simulation methods. Monte Carlo codes have been proved a valuable tool for studying X-PCi including coherent effects. The laser-plasma wakefield accelerators (LWFA) is a very compact particle accelerator that uses plasma as an accelerating medium. Accelerating gradient in excess of 1 GV/cm can be obtained, which makes them over a thousand times more compact than conventional accelerators. LWFA are also sources of brilliant betatron radiation, which are promising for applications including medical imaging. We present a study that explores the potential of LWFA-based betatron sources for medical X-PCi and investigate its resolution limit using numerical simulations based on the FLUKA Monte Carlo code, and present preliminary experimental results.

Forward and adjoint spectral-element simulations of seismic wave propagation using hardware accelerators

Science.gov (United States)

Peter, Daniel; Videau, Brice; Pouget, Kevin; Komatitsch, Dimitri

2015-04-01

Improving the resolution of tomographic images is crucial to answer important questions on the nature of Earth's subsurface structure and internal processes. Seismic tomography is the most prominent approach where seismic signals from ground-motion records are used to infer physical properties of internal structures such as compressional- and shear-wave speeds, anisotropy and attenuation. Recent advances in regional- and global-scale seismic inversions move towards full-waveform inversions which require accurate simulations of seismic wave propagation in complex 3D media, providing access to the full 3D seismic wavefields. However, these numerical simulations are computationally very expensive and need high-performance computing (HPC) facilities for further improving the current state of knowledge. During recent years, many-core architectures such as graphics processing units (GPUs) have been added to available large HPC systems. Such GPU-accelerated computing together with advances in multi-core central processing units (CPUs) can greatly accelerate scientific applications. There are mainly two possible choices of language support for GPU cards, the CUDA programming environment and OpenCL language standard. CUDA software development targets NVIDIA graphic cards while OpenCL was adopted mainly by AMD graphic cards. In order to employ such hardware accelerators for seismic wave propagation simulations, we incorporated a code generation tool BOAST into an existing spectral-element code package SPECFEM3D_GLOBE. This allows us to use meta-programming of computational kernels and generate optimized source code for both CUDA and OpenCL languages, running simulations on either CUDA or OpenCL hardware accelerators. We show here applications of forward and adjoint seismic wave propagation on CUDA/OpenCL GPUs, validating results and comparing performances for different simulations and hardware usages.

An FFT-accelerated time-domain multiconductor transmission line simulator

KAUST Repository

Bagci, Hakan

2010-02-01

A fast time-domain multiconductor transmission line (MTL) simulator for analyzing general MTL networks is presented. The simulator models the networks as homogeneous MTLs that are excited by external fields and driven/terminated/ connected by potentially nonlinear lumped circuitry. It hybridizes an MTL solver derived from time-domain integral equations (TDIEs) in unknown wave coefficients for each MTL with a circuit solver rooted in modified nodal analysis equations in unknown node voltages and voltage-source currents for each circuit. These two solvers are rigorously interfaced at MTL and circuit terminals, and the resulting coupled system of equations is solved simultaneously for all MTL and circuit unknowns at each time step. The proposed simulator is amenable to hybridization, is fast Fourier transform (FFT)-accelerated, and is highly accurate: 1) It can easily be hybridized with TDIE-based field solvers (in a fully rigorous mathematical framework) for performing electromagnetic interference and compatibility analysis on electrically large and complex structures loaded with MTL networks. 2) It is accelerated by an FFT algorithm that calculates temporal convolutions of time-domain MTL Green functions in only O(Ntlog2 N t) rather than O(Ntt2) operations, where N t is the number of time steps of simulation. Moreover, the algorithm, which operates on temporal samples of MTL Green functions, is indifferent to the method used to obtain them. 3) It approximates MTL voltages, currents, and wave coefficients, using high-order temporal basis functions. Various numerical examples, including the crosstalk analysis of a (twisted) unshielded twisted-pair (UTP)-CAT5 cable and the analysis of field coupling into UTP-CAT5 and RG-58 cables located on an airplane, are presented to demonstrate the accuracy, efficiency, and versatility of the proposed simulator. © 2010 IEEE.

Design study of longitudinal dynamics of the drive beam in 1 TeV relativistic klystron two-beam accelerator

International Nuclear Information System (INIS)

Li, H.; Yu, S.S.; Sessler, A.M.

1994-10-01

In this paper the authors present a design study on the longitudinal dynamics of a relativistic klystron two-beam accelerator (RK-TBA) scheme which has been proposed as a power source candidate for a 1 TeV next linear collider (NLC). They address the issue of maintaining stable power output at desired level for a 300-m long TBA with 150 extraction cavities and present their simulation results to demonstrate that it can be achieved by inductively detuning the extraction cavities to counter the space charge debunching effect on the drive beam. They then carry out simulation study to show that the beam bunches desired by the RK-TBA can be efficiently obtained by first chopping an initially uniform beam of low energy into a train of beam bunches with modest longitudinal dimension and then using the open-quotes adiabatic captureclose quotes scheme to bunch and accelerate these beam bunches into tight bunches at the operating energy of the drive beam. The authors have also examined the open-quotes after burnerclose quotes scheme which is implemented in their RK-TBA design for efficiency enhancement

Resonant ion acceleration by collisionless magnetosonic shock waves

International Nuclear Information System (INIS)

Ohsawa, Y.

1985-01-01

Resonant ion acceleration ( the ν/sub rho/xΒ acceleration ) in laminar magnetosonic shock waves is studied by theory and simulation. Theoretical analysis based on a two-fluid model shows that, in laminar shocks, the electric field strength in the direction of the wave normal is about (m/sub i/m/sub e/) 1 2 times large for quasi-perpendicular shocks than that for the quasi-parallel shocks, which is a reflection of the fact that the width of quasi-perpendicular shocks is much smaller than that of the quasi-parallel shocks. Trapped ions can be accelerated up to the speed about ν/sub A/(m/sub i/m/sub e/) 1 2(M/sub A/-1) 3 2 in quasi-perpendicular shocks. Time evolution of self-consistent magnetosonic shock waves is studied by using a 2-12 dimensional fully relativistic, fully electromagnetic particle simulation with full ion and electron dynamics. Even a low-Mach-number shock wave can significantly accelerate trapped ions by the ν/sub rho/xΒ acceleration. The resonant ion acceleration occurs more strongly in quasi-perpendicular shocks, because the magnitude of this acceleration is proportional to the electric field strength

Benchmarking shielding simulations for an accelerator-driven spallation neutron source

Directory of Open Access Journals (Sweden)

Nataliia Cherkashyna

2015-08-01

Full Text Available The shielding at an accelerator-driven spallation neutron facility plays a critical role in the performance of the neutron scattering instruments, the overall safety, and the total cost of the facility. Accurate simulation of shielding components is thus key for the design of upcoming facilities, such as the European Spallation Source (ESS, currently in construction in Lund, Sweden. In this paper, we present a comparative study between the measured and the simulated neutron background at the Swiss Spallation Neutron Source (SINQ, at the Paul Scherrer Institute (PSI, Villigen, Switzerland. The measurements were carried out at several positions along the SINQ monolith wall with the neutron dosimeter WENDI-2, which has a well-characterized response up to 5 GeV. The simulations were performed using the Monte-Carlo radiation transport code geant4, and include a complete transport from the proton beam to the measurement locations in a single calculation. An agreement between measurements and simulations is about a factor of 2 for the points where the measured radiation dose is above the background level, which is a satisfactory result for such simulations spanning many energy regimes, different physics processes and transport through several meters of shielding materials. The neutrons contributing to the radiation field emanating from the monolith were confirmed to originate from neutrons with energies above 1 MeV in the target region. The current work validates geant4 as being well suited for deep-shielding calculations at accelerator-based spallation sources. We also extrapolate what the simulated flux levels might imply for short (several tens of meters instruments at ESS.

Acceleration and holographic studies on different types of dynamization of external fixators of the bones

Science.gov (United States)

Podbielska, Halina; Kasprzak, Henryk T.; Voloshin, Arkady S.; Pennig, Dietmar; von Bally, Gert

1992-08-01

The unilateral axially dynamic fixator (Orthofix) was mounted on a sheep tibial shaft. Three fixation modes: static, dynamic controlled, and dynamic free were examined by means of double exposure holographic interferometry. Simultaneously, the acceleration was measured by an accelerometer and displayed on the monitor together with loading characteristics. The first exposure was made before the acting force was applied to the tibia plateau. The second one after the moment when the acceleration wave started to propagate through the specimen. We stated that in the case of dynamization less torsion occurs at the fracture site. So far, we have not been able to determine any correlation between results of holographic and accelerometric measurements.

Simulation of density measurements in plasma wakefields using photon acceleration

Directory of Open Access Journals (Sweden)

Muhammad Firmansyah Kasim

2015-03-01

Full Text Available One obstacle in plasma accelerator development is the limitation of techniques to diagnose and measure plasma wakefield parameters. In this paper, we present a novel concept for the density measurement of a plasma wakefield using photon acceleration, supported by extensive particle in cell simulations of a laser pulse that copropagates with a wakefield. The technique can provide the perturbed electron density profile in the laser’s reference frame, averaged over the propagation length, to be accurate within 10%. We discuss the limitations that affect the measurement: small frequency changes, photon trapping, laser displacement, stimulated Raman scattering, and laser beam divergence. By considering these processes, one can determine the optimal parameters of the laser pulse and its propagation length. This new technique allows a characterization of the density perturbation within a plasma wakefield accelerator.

Dynamics of electron acceleration in laser-driven wakefields. Acceleration limits and asymmetric plasma waves

Energy Technology Data Exchange (ETDEWEB)

Popp, Antonia

2011-12-16

, was found to be 4.9 mm. Both values are in good agreement with theory. In addition, for our laser parameters, the factors that limit the acceleration distance at the different densities were identified. In the desirable low-density case, where in principle the highest energies can be reached, diffraction of the driver pulse stops the acceleration even before the dephasing length is reached. While plasma-length scans have been performed by other groups, this is the first comprehensive scan that covers a wide range of lengths, even beyond the dephasing length, thus allowing for a reliable determination of acceleration parameters. Only with this knowledge the gas target length and electron density can be optimized for given laser parameters. In a second experiment, the influence of a tilted laser-pulse-intensity front on laser- wakefield acceleration was investigated. Such a tilt may be used to excite asymmetric plasma wakes, which can steer electron bunches away from the initial laser axis and thus allow for all-optical control of the electron-pointing direction, in our setup within an 8 mrad opening window. This also implies that the pulse front tilt (PFT) originating in the laser system needs to be carefully monitored if one wants to avoid this effect. We also discovered evidence of collective electron-betatron oscillations due to off-axis electron injection into the wakefield induced by a pulse-front tilt. This is a potential knob to tune the X-ray radiation wavelength, as the strength of PFT changes the off-axis distances for injection. All experimental results are support by full-scale three-dimensional Particle-in-Cell simulations.

Dynamics of electron acceleration in laser-driven wakefields. Acceleration limits and asymmetric plasma waves

International Nuclear Information System (INIS)

Popp, Antonia

2011-01-01

. Both values are in good agreement with theory. In addition, for our laser parameters, the factors that limit the acceleration distance at the different densities were identified. In the desirable low-density case, where in principle the highest energies can be reached, diffraction of the driver pulse stops the acceleration even before the dephasing length is reached. While plasma-length scans have been performed by other groups, this is the first comprehensive scan that covers a wide range of lengths, even beyond the dephasing length, thus allowing for a reliable determination of acceleration parameters. Only with this knowledge the gas target length and electron density can be optimized for given laser parameters. In a second experiment, the influence of a tilted laser-pulse-intensity front on laser-wakefield acceleration was investigated. Such a tilt may be used to excite asymmetric plasma wakes, which can steer electron bunches away from the initial laser axis and thus allow for all-optical control of the electron-pointing direction, in our setup within an 8 mrad opening window. This also implies that the pulse front tilt (PFT) originating in the laser system needs to be carefully monitored if one wants to avoid this effect. We also discovered evidence of collective electron-betatron oscillations due to off-axis electron injection into the wakefield induced by a pulse-front tilt. This is a potential knob to tune the X-ray radiation wavelength, as the strength of PFT changes the off-axis distances for injection. All experimental results are support by full-scale three-dimensional Particle-in-Cell simulations.

Two-stage light-gas magnetoplasma accelerator for hypervelocity impact simulation

International Nuclear Information System (INIS)

Khramtsov, P P; Vasetskij, V A; Makhnach, A I; Grishenko, V M; Chernik, M Yu; Shikh, I A; Doroshko, M V

2016-01-01

The development of macroparticles acceleration methods for high-speed impact simulation in a laboratory is an actual problem due to increasing of space flights duration and necessity of providing adequate spacecraft protection against micrometeoroid and space debris impacts. This paper presents results of experimental study of a two-stage light- gas magnetoplasma launcher for acceleration of a macroparticle, in which a coaxial plasma accelerator creates a shock wave in a high-pressure channel filled with light gas. Graphite and steel spheres with diameter of 2.5-4 mm were used as a projectile and were accelerated to the speed of 0.8-4.8 km/s. A launching of particle occurred in vacuum. For projectile velocity control the speed measuring method was developed. The error of this metod does not exceed 5%. The process of projectile flight from the barrel and the process of a particle collision with a target were registered by use of high-speed camera. The results of projectile collision with elements of meteoroid shielding are presented. In order to increase the projectile velocity, the high-pressure channel should be filled with hydrogen. However, we used helium in our experiments for safety reasons. Therefore, we can expect that the range of mass and velocity of the accelerated particles can be extended by use of hydrogen as an accelerating gas. (paper)

Two-stage light-gas magnetoplasma accelerator for hypervelocity impact simulation

Science.gov (United States)

Khramtsov, P. P.; Vasetskij, V. A.; Makhnach, A. I.; Grishenko, V. M.; Chernik, M. Yu; Shikh, I. A.; Doroshko, M. V.

2016-11-01

The development of macroparticles acceleration methods for high-speed impact simulation in a laboratory is an actual problem due to increasing of space flights duration and necessity of providing adequate spacecraft protection against micrometeoroid and space debris impacts. This paper presents results of experimental study of a two-stage light- gas magnetoplasma launcher for acceleration of a macroparticle, in which a coaxial plasma accelerator creates a shock wave in a high-pressure channel filled with light gas. Graphite and steel spheres with diameter of 2.5-4 mm were used as a projectile and were accelerated to the speed of 0.8-4.8 km/s. A launching of particle occurred in vacuum. For projectile velocity control the speed measuring method was developed. The error of this metod does not exceed 5%. The process of projectile flight from the barrel and the process of a particle collision with a target were registered by use of high-speed camera. The results of projectile collision with elements of meteoroid shielding are presented. In order to increase the projectile velocity, the high-pressure channel should be filled with hydrogen. However, we used helium in our experiments for safety reasons. Therefore, we can expect that the range of mass and velocity of the accelerated particles can be extended by use of hydrogen as an accelerating gas.

Simulation of PEP-II Accelerator Backgrounds Using TURTLE

CERN Document Server

Barlow, Roger J; Kozanecki, Witold; Majewski, Stephanie; Roudeau, Patrick; Stocchi, Achille

2005-01-01

We present studies of accelerator-induced backgrounds in the BaBar detector at the SLAC B-Factory, carried out using a modified version ofthe DECAY TURTLE simulation package. Lost-particle backgrounds in PEP-II are dominated by a combination of beam-gas bremstrahlung, beam-gas Coulomb scattering, radiative-Bhabha events and beam-beam blow-up. The radiation damage and detector occupancy caused by the associated electromagnetic shower debris can limit the usable luminosity. In order to understand and mitigate such backgrounds, we have performed a full programme of beam-gas and luminosity-background simulations, that include the effects of the detector solenoidal field, detailed modelling of limiting apertures in both collider rings, and optimization of the betatron collimation scheme in the presence of large transverse tails.

Particle acceleration and injection problem in relativistic and nonrelativistic shocks

International Nuclear Information System (INIS)

Hoshino, M.

2008-01-01

Acceleration of charged particles at the collisionless shock is believed to be responsible for production of cosmic rays in a variety of astrophysical objects such as supernova, AGN jet, and GRB etc., and the diffusive shock acceleration model is widely accepted as a key process for generating cosmic rays with non-thermal, power-law energy spectrum. Yet it is not well understood how the collisionless shock can produce such high energy particles. Among several unresolved issues, two major problems are the so-called '' injection '' problem of the supra-thermal particles and the generation of plasma waves and turbulence in and around the shock front. With recent advance of computer simulations, however, it is now possible to discuss those issues together with dynamical evolution of the kinetic shock structure. A wealth of modern astrophysical observations also inspires the dynamical shock structure and acceleration processes along with the theoretical and computational studies on shock. In this presentation, we focus on the plasma wave generation and the associated particle energization that directly links to the injection problem by taking into account the kinetic plasma processes of both non-relativistic and relativistic shocks by using a particle-in-cell simulation. We will also discuss some new particle acceleration mechanisms such as stochastic surfing acceleration and wakefield acceleration by the action of nonlinear electrostatic fields. (author)

Simulation of isothermal multi-phase fuel-coolant interaction using MPS method with GPU acceleration

Energy Technology Data Exchange (ETDEWEB)

Gou, W.; Zhang, S.; Zheng, Y. [Zhejiang Univ., Hangzhou (China). Center for Engineering and Scientific Computation

2016-07-15

The energetic fuel-coolant interaction (FCI) has been one of the primary safety concerns in nuclear power plants. Graphical processing unit (GPU) implementation of the moving particle semi-implicit (MPS) method is presented and used to simulate the fuel coolant interaction problem. The governing equations are discretized with the particle interaction model of MPS. Detailed implementation on single-GPU is introduced. The three-dimensional broken dam is simulated to verify the developed GPU acceleration MPS method. The proposed GPU acceleration algorithm and developed code are then used to simulate the FCI problem. As a summary of results, the developed GPU-MPS method showed a good agreement with the experimental observation and theoretical prediction.

Dynamic Simulation of AN Helium Refrigerator

Science.gov (United States)

Deschildre, C.; Barraud, A.; Bonnay, P.; Briend, P.; Girard, A.; Poncet, J. M.; Roussel, P.; Sequeira, S. E.

2008-03-01

A dynamic simulation of a large scale existing refrigerator has been performed using the software Aspen Hysys®. The model comprises the typical equipments of a cryogenic system: heat exchangers, expanders, helium phase separators and cold compressors. It represents the 400 W @ 1.8 K Test Facility located at CEA—Grenoble. This paper describes the model development and shows the possibilities and limitations of the dynamic module of Aspen Hysys®. Then, comparison between simulation results and experimental data are presented; the simulation of cooldown process was also performed.

Implementation of metal-friendly EAM/FS-type semi-empirical potentials in HOOMD-blue: A GPU-accelerated molecular dynamics software

Science.gov (United States)

Yang, Lin; Zhang, Feng; Wang, Cai-Zhuang; Ho, Kai-Ming; Travesset, Alex

2018-04-01

We present an implementation of EAM and FS interatomic potentials, which are widely used in simulating metallic systems, in HOOMD-blue, a software designed to perform classical molecular dynamics simulations using GPU accelerations. We first discuss the details of our implementation and then report extensive benchmark tests. We demonstrate that single-precision floating point operations efficiently implemented on GPUs can produce sufficient accuracy when compared against double-precision codes, as demonstrated in test simulations of calculations of the glass-transition temperature of Cu64.5Zr35.5, and pair correlation function g (r) of liquid Ni3Al. Our code scales well with the size of the simulating system on NVIDIA Tesla M40 and P100 GPUs. Compared with another popular software LAMMPS running on 32 cores of AMD Opteron 6220 processors, the GPU/CPU performance ratio can reach as high as 4.6. The source code can be accessed through the HOOMD-blue web page for free by any interested user.

Development Of Dynamic Probabilistic Safety Assessment: The Accident Dynamic Simulator (ADS) Tool

International Nuclear Information System (INIS)

Chang, Y.H.; Mosleh, A.; Dang, V.N.

2003-01-01

The development of a dynamic methodology for Probabilistic Safety Assessment (PSA) addresses the complex interactions between the behaviour of technical systems and personnel response in the evolution of accident scenarios. This paper introduces the discrete dynamic event tree, a framework for dynamic PSA, and its implementation in the Accident Dynamic Simulator (ADS) tool. Dynamic event tree tools generate and quantify accident scenarios through coupled simulation models of the plant physical processes, its automatic systems, the equipment reliability, and the human response. The current research on the framework, the ADS tool, and on Human Reliability Analysis issues within dynamic PSA, is discussed. (author)

Development Of Dynamic Probabilistic Safety Assessment: The Accident Dynamic Simulator (ADS) Tool

Energy Technology Data Exchange (ETDEWEB)

Chang, Y.H.; Mosleh, A.; Dang, V.N

2003-03-01

The development of a dynamic methodology for Probabilistic Safety Assessment (PSA) addresses the complex interactions between the behaviour of technical systems and personnel response in the evolution of accident scenarios. This paper introduces the discrete dynamic event tree, a framework for dynamic PSA, and its implementation in the Accident Dynamic Simulator (ADS) tool. Dynamic event tree tools generate and quantify accident scenarios through coupled simulation models of the plant physical processes, its automatic systems, the equipment reliability, and the human response. The current research on the framework, the ADS tool, and on Human Reliability Analysis issues within dynamic PSA, is discussed. (author)

Effects of dimensionality and laser polarization on kinetic simulations of laser-ion acceleration in the transparency regime

Science.gov (United States)

Stark, David; Yin, Lin; Albright, Brian; Guo, Fan

2017-10-01

The often cost-prohibitive nature of three-dimensional (3D) kinetic simulations of laser-plasma interactions has resulted in heavy use of two-dimensional (2D) simulations to extract physics. However, depending on whether the polarization is modeled as 2D-S or 2D-P (laser polarization in and out of the simulation plane, respectively), different results arise. In laser-ion acceleration in the transparency regime, VPIC particle-in-cell simulations show that 2D-S and 2D-P capture different physics that appears in 3D simulations. The electron momentum distribution is virtually two-dimensional in 2D-P, unlike the more isotropic distributions in 2D-S and 3D, leading to greater heating in the simulation plane. As a result, target expansion time scales and density thresholds for the onset of relativistic transparency differ dramatically between 2D-S and 2D-P. The artificial electron heating in 2D-P exaggerates the effectiveness of target-normal sheath acceleration (TNSA) into its dominant acceleration mechanism, whereas 2D-S and 3D both have populations accelerated preferentially during transparency to higher energies than those of TNSA. Funded by the LANL Directed Research and Development Program.

Two-fluid electromagnetic simulations of plasma-jet acceleration with detailed equation-of-state

International Nuclear Information System (INIS)

Thoma, C.; Welch, D. R.; Clark, R. E.; Bruner, N.; MacFarlane, J. J.; Golovkin, I. E.

2011-01-01

We describe a new particle-based two-fluid fully electromagnetic algorithm suitable for modeling high density (n i ∼ 10 17 cm -3 ) and high Mach number laboratory plasma jets. In this parameter regime, traditional particle-in-cell (PIC) techniques are challenging due to electron timescale and lengthscale constraints. In this new approach, an implicit field solve allows the use of large timesteps while an Eulerian particle remap procedure allows simulations to be run with very few particles per cell. Hall physics and charge separation effects are included self-consistently. A detailed equation of state (EOS) model is used to evolve the ion charge state and introduce non-ideal gas behavior. Electron cooling due to radiation emission is included in the model as well. We demonstrate the use of these new algorithms in 1D and 2D Cartesian simulations of railgun (parallel plate) jet accelerators using He and Ar gases. The inclusion of EOS and radiation physics reduces the electron temperature, resulting in higher calculated jet Mach numbers in the simulations. We also introduce a surface physics model for jet accelerators in which a frictional drag along the walls leads to axial spreading of the emerging jet. The simulations demonstrate that high Mach number jets can be produced by railgun accelerators for a variety of applications, including high energy density physics experiments.

Two-fluid electromagnetic simulations of plasma-jet acceleration with detailed equation-of-state

Energy Technology Data Exchange (ETDEWEB)

Thoma, C.; Welch, D. R.; Clark, R. E.; Bruner, N. [Voss Scientific, LLC, Albuquerque, New Mexico 87108 (United States); MacFarlane, J. J.; Golovkin, I. E. [Prism Computational Sciences, Inc., Madison, Wisconsin 53711 (United States)

2011-10-15

We describe a new particle-based two-fluid fully electromagnetic algorithm suitable for modeling high density (n{sub i} {approx} 10{sup 17} cm{sup -3}) and high Mach number laboratory plasma jets. In this parameter regime, traditional particle-in-cell (PIC) techniques are challenging due to electron timescale and lengthscale constraints. In this new approach, an implicit field solve allows the use of large timesteps while an Eulerian particle remap procedure allows simulations to be run with very few particles per cell. Hall physics and charge separation effects are included self-consistently. A detailed equation of state (EOS) model is used to evolve the ion charge state and introduce non-ideal gas behavior. Electron cooling due to radiation emission is included in the model as well. We demonstrate the use of these new algorithms in 1D and 2D Cartesian simulations of railgun (parallel plate) jet accelerators using He and Ar gases. The inclusion of EOS and radiation physics reduces the electron temperature, resulting in higher calculated jet Mach numbers in the simulations. We also introduce a surface physics model for jet accelerators in which a frictional drag along the walls leads to axial spreading of the emerging jet. The simulations demonstrate that high Mach number jets can be produced by railgun accelerators for a variety of applications, including high energy density physics experiments.

Man-systems evaluation of moving base vehicle simulation motion cues. [human acceleration perception involving visual feedback

Science.gov (United States)

Kirkpatrick, M.; Brye, R. G.

1974-01-01

A motion cue investigation program is reported that deals with human factor aspects of high fidelity vehicle simulation. General data on non-visual motion thresholds and specific threshold values are established for use as washout parameters in vehicle simulation. A general purpose similator is used to test the contradictory cue hypothesis that acceleration sensitivity is reduced during a vehicle control task involving visual feedback. The simulator provides varying acceleration levels. The method of forced choice is based on the theory of signal detect ability.

Dynamics on the positron capture and accelerating sections of CLIC

CERN Document Server

Poirier, Freddy; Vivoli, Alessandro; Dadoun, Olivier; Lepercq, Pierre; Variola, Alessandro

2011-01-01

The CLIC Pre-Injector Linac for the e+ beam is composed of an Adiabatic Matching Device (AMD) followed by 4 (or 5) accelerating RF structures embedded in a solenoidal magnetic field. The accelerating sections are based on 2 GHz long travelling wave structures. In this note, the positrons capture strategy downstream the AMD is reviewed. The first RF structure can be phased either for full acceleration or for deceleration. In the latter case, the simulations results show that the number of e+ capture at the end of the 200 MeV Pre-Injector Linac is increased. Then the impact of the space charge is presented. Additional techniques are also studied to explore the potentiality of increasing the number of e+ namely an extra RF field at the beginning of the capture section and a higher solenoidal field.

Dynamic simulation of a reboiler

International Nuclear Information System (INIS)

Moeck, E.O.; McMorran, P.D.

1977-07-01

A hybrid-computer simulation of reboiler dynamics was prepared, comprising models of steam condensation in tubes, heat conduction, steam generation, a surge tank, steam transmission line and flow-control valve. Time and frequency responses were obtained to illustrate the dynamics of this multivariable process. (author)

Modeling the dynamics of a storm-time acceleration event: combining MHD effects with wave-particle interactions

Science.gov (United States)

Elkington, S. R.; Alam, S. S.; Chan, A. A.; Albert, J.; Jaynes, A. N.; Baker, D. N.; Wiltberger, M. J.

2017-12-01

Global simulations of radiation belt dynamics are often undertaken using either a transport formalism (e.g. Fokker-Plank), or via test particle simulations in model electric and magnetic fields. While transport formalisms offer computational efficiency and the ability to deal with a wide range of wave-particle interactions, they typically rely on simplified background fields, and often are limited to empirically-specified stochastic (diffusive) wave-particle interactions. On the other hand, test particle simulations may be carried out in global MHD simulations that include realistic physical effects such as magnetopause shadowing, convection, and substorm injections, but lack the ability to handle physics outside the MHD approximation in the realm of higher frequency (kHz) wave populations.In this work we introduce a comprehensive simulation framework combining global MHD/test particle techniques to provide realistic background fields and radial transport processes, with a Stochastic Differential Equation (SDE) method for addressing high frequency wave-particle interactions. We examine the March 17, 2013 storm-time acceleration period, an NSF-GEM focus challenge event, and use the framework to examine the relative importance of physical effects such as magnetopause shadowing, diffusive and advective transport processes, and wave-particle interactions through the various phases of the storm.

Molecular dynamics simulations of the interaction between 60 deg. dislocation and self-interstitial cluster in silicon

International Nuclear Information System (INIS)

Jing Yuhang; Meng Qingyuan; Zhao Wei

2009-01-01

Molecular dynamics simulations are performed to investigate the interaction between 60 deg. shuffle dislocation and tetrainterstitial (I 4 ) cluster in silicon, using Stillinger-Weber (SW) potential to calculate the interatomic forces. Based on Parrinello-Rahman method, shear stress is exerted on the model to move the dislocation. Simulation results show that the I 4 cluster can bend the dislocation line and delay the dislocation movement. During the course of intersection the dislocation line sections relatively far away from the I 4 cluster accelerate first, and then decelerate. The critical shear stress unpinning the 60 deg. dislocation from the I 4 cluster decreases as the temperature increases in the models.

Real-time cavity simulator-based low-level radio-frequency test bench and applications for accelerators

Science.gov (United States)

Qiu, Feng; Michizono, Shinichiro; Miura, Takako; Matsumoto, Toshihiro; Liu, Na; Wibowo, Sigit Basuki

2018-03-01

A Low-level radio-frequency (LLRF) control systems is required to regulate the rf field in the rf cavity used for beam acceleration. As the LLRF system is usually complex, testing of the basic functions or control algorithms of this system in real time and in advance of beam commissioning is strongly recommended. However, the equipment necessary to test the LLRF system, such as superconducting cavities and high-power rf sources, is very expensive; therefore, we have developed a field-programmable gate array (FPGA)-based cavity simulator as a substitute for real rf cavities. Digital models of the cavity and other rf systems are implemented in the FPGA. The main components include cavity baseband models for the fundamental and parasitic modes, a mechanical model of the Lorentz force detuning, and a model of the beam current. Furthermore, in our simulator, the disturbance model used to simulate the power-supply ripples and microphonics is also carefully considered. Based on the presented cavity simulator, we have established an LLRF system test bench that can be applied to different cavity operational conditions. The simulator performance has been verified by comparison with real cavities in KEK accelerators. In this paper, the development and implementation of this cavity simulator is presented first, and the LLRF test bench based on the presented simulator is constructed. The results are then compared with those for KEK accelerators. Finally, several LLRF applications of the cavity simulator are illustrated.

Real-time cavity simulator-based low-level radio-frequency test bench and applications for accelerators

Directory of Open Access Journals (Sweden)

Feng Qiu

2018-03-01

Full Text Available A Low-level radio-frequency (LLRF control systems is required to regulate the rf field in the rf cavity used for beam acceleration. As the LLRF system is usually complex, testing of the basic functions or control algorithms of this system in real time and in advance of beam commissioning is strongly recommended. However, the equipment necessary to test the LLRF system, such as superconducting cavities and high-power rf sources, is very expensive; therefore, we have developed a field-programmable gate array (FPGA-based cavity simulator as a substitute for real rf cavities. Digital models of the cavity and other rf systems are implemented in the FPGA. The main components include cavity baseband models for the fundamental and parasitic modes, a mechanical model of the Lorentz force detuning, and a model of the beam current. Furthermore, in our simulator, the disturbance model used to simulate the power-supply ripples and microphonics is also carefully considered. Based on the presented cavity simulator, we have established an LLRF system test bench that can be applied to different cavity operational conditions. The simulator performance has been verified by comparison with real cavities in KEK accelerators. In this paper, the development and implementation of this cavity simulator is presented first, and the LLRF test bench based on the presented simulator is constructed. The results are then compared with those for KEK accelerators. Finally, several LLRF applications of the cavity simulator are illustrated.

Flux Rope Acceleration and Enhanced Magnetic Reconnection Rate

International Nuclear Information System (INIS)

C.Z. Cheng; Y. Ren; G.S. Choe; Y.-J. Moon

2003-01-01

A physical mechanism of flares, in particular for the flare rise phase, has emerged from our 2-1/2-dimensional resistive MHD simulations. The dynamical evolution of current-sheet formation and magnetic reconnection and flux-rope acceleration subject to continuous, slow increase of magnetic shear in the arcade are studied by employing a non-uniform anomalous resistivity in the reconnecting current sheet under gravity. The simulation results directly relate the flux rope's accelerated rising motion with an enhanced magnetic reconnection rate and thus an enhanced reconnection electric field in the current sheet during the flare rise phase. The simulation results provide good quantitative agreements with observations of the acceleration of flux rope, which manifests in the form of SXR ejecta or erupting filament or CMEs, in the low corona. Moreover, for the X-class flare events studied in this paper the peak reconnection electric field is about O(10 2 V/m) or larger, enough to accelerate p articles to over 100 keV in a field-aligned distance of 10 km. Nonthermal electrons thus generated can produce hard X-rays, consistent with impulsive HXR emission observed during the flare rise phase

Simulation study on dynamics of runaways in tokamaks

International Nuclear Information System (INIS)

Liu Jian; Qin Hong; Fisch, Nathaniel J.

2014-01-01

Electrons with high velocities can be accelerated to very high energies by a strong electric field to form runaway electrons. In tokamak, runaway electrons are produced in many different processes, including the acceleration from the high-energy tail of thermal distribution, through the runaway avalanche, during the rf wave heating and other non-Ohmic current drive, and even in the magnetic reconnection. This proceeding focus on different dynamical problems of runaway electrons in tokamaks. (author)

Structural and dynamical properties of the porins OmpF and OmpC: insights from molecular simulations

International Nuclear Information System (INIS)

Kumar, Amit; Hajjar, Eric; Ruggerone, Paolo; Ceccarelli, Matteo

2010-01-01

In this paper we investigate the structural and dynamical properties of the two major porins (OmpF and OmpC) in Escherichia coli, using molecular dynamics (MD) simulations. In particular we characterized the atomic fluctuations, correlated motions, temperature dependence, solvent-accessible cross-sectional area and water dynamics in the key regions of the two channels. Our in-depth analysis allows us to highlight the importance of both the key conserved and substituted residues between OmpF and OmpC. The latter is characterized by a narrower and longer constriction region with respect to OmpF. OmpC also showed a higher stability upon increasing temperature. We then present the results of transport properties by using accelerated MD simulations to probe the diffusion of norfloxacin (a fluoroquinolone antibiotic) through the two porins OmpF/OmpC. Our study constitutes a step forward towards understanding the structure-function relationship of the two porins' channels. This will benefit the research of antibacterials with improved permeation properties and nanopores that aim to use these porins as sensing systems.

Dynamic behavior of IREB in a collective ion acceleration experiment

International Nuclear Information System (INIS)

Fine, T.A.; Rhee, M.J.

1989-01-01

The authors report an experimental study of dynamic behavior of net current in conjunction with collective ion acceleration. In the presence of neutral gas, either puffed in or released from the anode foil, the IREB injected is subject to the charge and current neutralizations, resulting in a complicated time and space dependent beam distribution in the drift tube. To investigate the dynamic behavior of the current in the drift tube, typically a 0.5 MeV, 70 kA, 100 ns electron beam of 2.54 cm diam is injected through a foil anode into a drift tube of 15 cm diam. Reproducibility of experiment was improved by using a specially designed anode system with a foil changer which allowed the production of many shots of high current electron beam without disturbing the vacuum condition. The net currents were measured by a Rogowski coil built in the anode system, and a movable Faraday cup along the drift tube. The ions accelerated were diagnosed mainly by a Thomson spectrometer system placed at the end of the drift tube

Algorithm for simulation of quantum many-body dynamics using dynamical coarse-graining

International Nuclear Information System (INIS)

Khasin, M.; Kosloff, R.

2010-01-01

An algorithm for simulation of quantum many-body dynamics having su(2) spectrum-generating algebra is developed. The algorithm is based on the idea of dynamical coarse-graining. The original unitary dynamics of the target observables--the elements of the spectrum-generating algebra--is simulated by a surrogate open-system dynamics, which can be interpreted as weak measurement of the target observables, performed on the evolving system. The open-system state can be represented by a mixture of pure states, localized in the phase space. The localization reduces the scaling of the computational resources with the Hilbert-space dimension n by factor n 3/2 (ln n) -1 compared to conventional sparse-matrix methods. The guidelines for the choice of parameters for the simulation are presented and the scaling of the computational resources with the Hilbert-space dimension of the system is estimated. The algorithm is applied to the simulation of the dynamics of systems of 2x10 4 and 2x10 6 cold atoms in a double-well trap, described by the two-site Bose-Hubbard model.

The Study of Non-Linear Acceleration of Particles during Substorms Using Multi-Scale Simulations

International Nuclear Information System (INIS)

Ashour-Abdalla, Maha

2011-01-01

To understand particle acceleration during magnetospheric substorms we must consider the problem on multple scales ranging from the large scale changes in the entire magnetosphere to the microphysics of wave particle interactions. In this paper we present two examples that demonstrate the complexity of substorm particle acceleration and its multi-scale nature. The first substorm provided us with an excellent example of ion acceleration. On March 1, 2008 four THEMIS spacecraft were in a line extending from 8 R E to 23 R E in the magnetotail during a very large substorm during which ions were accelerated to >500 keV. We used a combination of a global magnetohydrodynamic and large scale kinetic simulations to model the ion acceleration and found that the ions gained energy by non-adiabatic trajectories across the substorm electric field in a narrow region extending across the magnetotail between x = -10 R E and x = -15 R E . In this strip called the 'wall region' the ions move rapidly in azimuth and gain 100s of keV. In the second example we studied the acceleration of electrons associated with a pair of dipolarization fronts during a substorm on February 15, 2008. During this substorm three THEMIS spacecraft were grouped in the near-Earth magnetotail (x ∼-10 R E ) and observed electron acceleration of >100 keV accompanied by intense plasma waves. We used the MHD simulations and analytic theory to show that adiabatic motion (betatron and Fermi acceleration) was insufficient to account for the electron acceleration and that kinetic processes associated with the plasma waves were important.

DROIDS 1.20: A GUI-Based Pipeline for GPU-Accelerated Comparative Protein Dynamics.

Science.gov (United States)

Babbitt, Gregory A; Mortensen, Jamie S; Coppola, Erin E; Adams, Lily E; Liao, Justin K

2018-03-13

Traditional informatics in comparative genomics work only with static representations of biomolecules (i.e., sequence and structure), thereby ignoring the molecular dynamics (MD) of proteins that define function in the cell. A comparative approach applied to MD would connect this very short timescale process, defined in femtoseconds, to one of the longest in the universe: molecular evolution measured in millions of years. Here, we leverage advances in graphics-processing-unit-accelerated MD simulation software to develop a comparative method of MD analysis and visualization that can be applied to any two homologous Protein Data Bank structures. Our open-source pipeline, DROIDS (Detecting Relative Outlier Impacts in Dynamic Simulations), works in conjunction with existing molecular modeling software to convert any Linux gaming personal computer into a "comparative computational microscope" for observing the biophysical effects of mutations and other chemical changes in proteins. DROIDS implements structural alignment and Benjamini-Hochberg-corrected Kolmogorov-Smirnov statistics to compare nanosecond-scale atom bond fluctuations on the protein backbone, color mapping the significant differences identified in protein MD with single-amino-acid resolution. DROIDS is simple to use, incorporating graphical user interface control for Amber16 MD simulations, cpptraj analysis, and the final statistical and visual representations in R graphics and UCSF Chimera. We demonstrate that DROIDS can be utilized to visually investigate molecular evolution and disease-related functional changes in MD due to genetic mutation and epigenetic modification. DROIDS can also be used to potentially investigate binding interactions of pharmaceuticals, toxins, or other biomolecules in a functional evolutionary context as well. Copyright © 2018 Biophysical Society. Published by Elsevier Inc. All rights reserved.

Gender differences in head-neck segment dynamic stabilization during head acceleration.

Science.gov (United States)

Tierney, Ryan T; Sitler, Michael R; Swanik, C Buz; Swanik, Kathleen A; Higgins, Michael; Torg, Joseph

2005-02-01

Recent epidemiological research has revealed that gender differences exist in concussion incidence but no study has investigated why females may be at greater risk of concussion. Our purpose was to determine whether gender differences existed in head-neck segment kinematic and neuromuscular control variables responses to an external force application with and without neck muscle preactivation. Forty (20 females and 20 males) physically active volunteers participated in the study. The independent variables were gender, force application (known vs unknown), and force direction (forced flexion vs forced extension). The dependent variables were kinematic and EMG variables, head-neck segment stiffness, and head-neck segment flexor and extensor isometric strength. Statistical analyses consisted of multiple multivariate and univariate analyses of variance, follow-up univariate analyses of variance, and t-tests (P Gender differences existed in head-neck segment dynamic stabilization during head angular acceleration. Females exhibited significantly greater head-neck segment peak angular acceleration (50%) and displacement (39%) than males despite initiating muscle activity significantly earlier (SCM only) and using a greater percentage of their maximum head-neck segment muscle activity (79% peak activity and 117% muscle activity area). The head-neck segment angular acceleration differences may be because females exhibited significantly less isometric strength (49%), neck girth (30%), and head mass (43%), resulting in lower levels of head-neck segment stiffness (29%). For our subject demographic, the results revealed gender differences in head-neck segment dynamic stabilization during head acceleration in response to an external force application. Females exhibited significantly greater head-neck segment peak angular acceleration and displacement than males despite initiating muscle activity earlier (SCM only) and using a greater percentage of their maximum head-neck segment

Dynamics and Thermodynamics of Transthyretin Association from Molecular Dynamics Simulations

Directory of Open Access Journals (Sweden)

Cedrix J. Dongmo Foumthuim

2018-01-01

Full Text Available Molecular dynamics simulations are used in this work to probe the structural stability and the dynamics of engineered mutants of transthyretin (TTR, i.e., the double mutant F87M/L110M (MT-TTR and the triple mutant F87M/L110M/S117E (3M-TTR, in relation to wild-type. Free energy analysis from end-point simulations and statistical effective energy functions are used to analyze trajectories, revealing that mutations do not have major impact on protein structure but rather on protein association, shifting the equilibria towards dissociated species. The result is confirmed by the analysis of 3M-TTR which shows dissociation within the first 10 ns of the simulation, indicating that contacts are lost at the dimer-dimer interface, whereas dimers (formed by monomers which pair to form two extended β-sheets appear fairly stable. Overall the simulations provide a detailed view of the dynamics and thermodynamics of wild-type and mutant transthyretins and a rationale of the observed effects.

Simulation of speed control in acceleration mode of a heavy duty vehicle; Ogatasha no kasokuji ni okeru shasoku seigyo simulation

Energy Technology Data Exchange (ETDEWEB)

Endo, S; Ukawa, H [Isuzu Advanced Engineering Center, Ltd., Tokyo (Japan); Sanada, K; Kitagawa, A [Tokyo Institute of Technology, Tokyo (Japan)

1997-10-01

A control law of speed of a heavy duty vehicle in acceleration mode is presented, which is an extended version of a control law in deceleration mode proposed by the authors. The control law is based on constant acceleration strategy. Using the control law, target velocity and target distance can be performed. Both control laws for acceleration and deceleration mode can be represented by a unified mathematical formulae. Some simulation results are shown to demonstrate the control performance. 7 refs., 9 figs., 2 tabs.

An investigation of the efficiency in simulating 6 MV medical accelerator using OMEGA/BEAM

International Nuclear Information System (INIS)

Dai Zhenhui; Wang Xuetao; Zhu Lin; Zhang Yu; Liu Xiaowei

2013-01-01

Background: Monte Carlo simulation techniques are presently considered to be the most reliable method for radiation therapy treatment planning. However, long simulation times involved when using the general-purpose Monte Carlo code systems have led to the development of special-purpose Monte Carlo programs. Purpose: This paper attempts to improve computing efficiency for dose calculation in the EGSnrc modeling of clinical linear accelerator by selecting proper parameters. Methods: Several variance reduction techniques including uniform bremsstrahlung splitting, selective bremsstrahlung splitting, directional bremsstrahlung splitting are applied in BEAMnrc simulating medical accelerator treatment head to generate phase-space file which is selected as a source for DOSXYZnrc simulation, both photon splitting and particle recycling are used to improve the efficiency in the calculation of dose profile in water phantom. Results: The splitting number for maximum efficiency in directional bremsstrahlung splitting (no electron splitting) is 2500 in the BEAMnrc simulation. The highest efficiency of DOSXYZnrc simulation is given when photon splitting number is set to 40. Conclusions: Efficiency can be significantly improved by setting appropriate bremsstrahlung splitting and optimized photon splitting number and particle recycling number. (authors)

Mathematical Modeling Of The Acceleration Process In Race-track Microtron

CERN Document Server

Gromov, A M; Vasilev, A A

2004-01-01

The precise calculations of beam dynamics are needed to make choice of optimal design parameters of race-track microtron. As a result, the necessary physical require-ments to the accelerator systems become found. For cal-culation of the magnetic field, POISSON LANL code is used. Acceleration of the beam is investigated with the help of the program of MathCad. Nonlinear distribution of the field in magnets of micro-tron with adjustable reverse field was simulated. The equation of motion of a beam in bending magnets of re-circulation system are found and solved by a numerical method. Trajectories of the beam for all orbits in a micro-tron are received. The recursive equation for calculation of the largest area of injected beam phase and power spreads providing steady acceleration process is written. The acceleration of the beam with maximal phase-energy area through all orbits of microtron was simulated. The velocity of accelerated particles on first orbits dif-fers from velocity of light. The minimal energy ...

Dynamic Beam Solutions for Real-Time Simulation and Control Development of Flexible Rockets

Science.gov (United States)

Su, Weihua; King, Cecilia K.; Clark, Scott R.; Griffin, Edwin D.; Suhey, Jeffrey D.; Wolf, Michael G.

2016-01-01

In this study, flexible rockets are structurally represented by linear beams. Both direct and indirect solutions of beam dynamic equations are sought to facilitate real-time simulation and control development for flexible rockets. The direct solution is completed by numerically integrate the beam structural dynamic equation using an explicit Newmark-based scheme, which allows for stable and fast transient solutions to the dynamics of flexile rockets. Furthermore, in the real-time operation, the bending strain of the beam is measured by fiber optical sensors (FOS) at intermittent locations along the span, while both angular velocity and translational acceleration are measured at a single point by the inertial measurement unit (IMU). Another study in this paper is to find the analytical and numerical solutions of the beam dynamics based on the limited measurement data to facilitate the real-time control development. Numerical studies demonstrate the accuracy of these real-time solutions to the beam dynamics. Such analytical and numerical solutions, when integrated with data processing and control algorithms and mechanisms, have the potential to increase launch availability by processing flight data into the flexible launch vehicle's control system.

Coil Springs Layer Used to Support a Car Vertical Dynamics Simulator and to Reduce the Maximum Actuation Force

Directory of Open Access Journals (Sweden)

Dan N. Dumitriu

2015-09-01

Full Text Available A Danaher Thomson linear actuator with ball screw drive and a realtime control system are used here to induce vertical displacements under the driver/user seat of an in-house dynamic car simulator. In order to better support the car simulator and to dynamically protect the actuator’s ball screw drive, a layer of coil springs is used to support the whole simulator chassis. More precisely, one coil spring is placed vertically under each corner of the rectangular chassis. The paper presents the choice of the appropriate coil springs, so that to minimize as much as possible the ball screw drive task of generating linear motions, corresponding to the vertical displacements and accelerations encountered by a driver during a real ride. For this application, coil springs with lower spring constant are more suited to reduce the forces in the ball screw drive and thus to increase the ball screw drive life expectancy.

Simulating the dynamic behavior of a vertical axis wind turbine operating in unsteady conditions

Science.gov (United States)

Battisti, L.; Benini, E.; Brighenti, A.; Soraperra, G.; Raciti Castelli, M.

2016-09-01

The present work aims at assessing the reliability of a simulation tool capable of computing the unsteady rotational motion and the associated tower oscillations of a variable speed VAWT immersed in a coherent turbulent wind. As a matter of fact, since the dynamic behaviour of a variable speed turbine strongly depends on unsteady wind conditions (wind gusts), a steady state approach can't accurately catch transient correlated issues. The simulation platform proposed here is implemented using a lumped mass approach: the drive train is described by resorting to both the polar inertia and the angular position of rotating parts, also considering their speed and acceleration, while rotor aerodynamic is based on steady experimental curves. The ultimate objective of the presented numerical platform is the simulation of transient phenomena, driven by turbulence, occurring during rotor operation, with the aim of supporting the implementation of efficient and robust control algorithms.

LIAR -- A new program for the modeling and simulation of linear accelerators with high gradients and small emittances

International Nuclear Information System (INIS)

Assmann, R.; Adolphsen, C.; Bane, K.; Raubenheimer, T.O.; Siemann, R.; Thompson, K.

1996-09-01

Linear accelerators are the central components of the proposed next generation of linear colliders. They need to provide acceleration of up to 750 GeV per beam while maintaining very small normalized emittances. Standard simulation programs, mainly developed for storage rings, do not meet the specific requirements for high energy linear accelerators. The authors present a new program LIAR (LInear Accelerator Research code) that includes wakefield effects, a 4D coupled beam description, specific optimization algorithms and other advanced features. Its modular structure allows to use and to extend it easily for different purposes. They present examples of simulations for SLC and NLC

Two-pulse acceleration for BEPCII injector linac

International Nuclear Information System (INIS)

Pei Shilun; Wang Shuhong; Lu Weibin

2007-01-01

In order to double the injection rate of positron beam from the linac to the storage ring of BEPC II, a two-pulse generation and acceleration scheme has been proposed. The two-pulse simulation by programs including LIAR, PARMELA, EGUN and TRANSPORT is described first and the method is applied in the beam dynamics studies of BEPC II linac. The experiment of two-pulse acceleration was performed in BEPC II linac and some preliminary results are obtained, which provides a good reference for further upgrading of BEPC II injector linac. (authors)

The charged particle accelerators subsystems modeling

International Nuclear Information System (INIS)

Averyanov, G P; Kobylyatskiy, A V

2017-01-01

Presented web-based resource for information support the engineering, science and education in Electrophysics, containing web-based tools for simulation subsystems charged particle accelerators. Formulated the development motivation of Web-Environment for Virtual Electrophysical Laboratories. Analyzes the trends of designs the dynamic web-environments for supporting of scientific research and E-learning, within the framework of Open Education concept. (paper)

ACCELERATORS: Nonlinear dynamics in Sardinia

International Nuclear Information System (INIS)

Anon.

1985-01-01

In the last few years, two schools devoted to accelerator physics have been set up, one on either side of the Atlantic. The US School on High Energy Particle Accelerators has organized Summer Schools on the physics of particle accelerators, hosted by the major American Laboratories, each year since 1981

ACCELERATORS: Nonlinear dynamics in Sardinia

Energy Technology Data Exchange (ETDEWEB)

Anon.

1985-05-15

In the last few years, two schools devoted to accelerator physics have been set up, one on either side of the Atlantic. The US School on High Energy Particle Accelerators has organized Summer Schools on the physics of particle accelerators, hosted by the major American Laboratories, each year since 1981.

Warp simulations for capture and control of laser-accelerated proton beams

International Nuclear Information System (INIS)

Nuernberg, Frank; Harres, K; Roth, M; Friedman, A; Grote, D P; Logan, B G; Schollmeier, M

2010-01-01

The capture of laser-accelerated proton beams accompanied by co-moving electrons via a solenoid field has been studied with particle-in-cell simulations. The main advantages of the Warp simulation suite that we have used, relative to envelope or tracking codes, are the possibility of including all source parameters energy resolved, adding electrons as second species and considering the non-negligible space-charge forces and electrostatic self-fields. It was observed that the influence of the electrons is of vital importance. The magnetic effect on the electrons outbalances the space-charge force. Hence, the electrons are forced onto the beam axis and attract protons. Beside the energy dependent proton density increase on axis, the change in the particle spectrum is also important for future applications. Protons are accelerated/decelerated slightly, electrons highly. 2/3 of all electrons get lost directly at the source and 27% of all protons hit the inner wall of the solenoid.

Warp simulations for capture and control of laser-accelerated proton beams

International Nuclear Information System (INIS)

Nurnberg, F.; Friedman, A.; Grote, D.P.; Harres, K.; Logan, B.G.; Schollmeier, M.; Roth, M.

2009-01-01

The capture of laser-accelerated proton beams accompanied by co-moving electrons via a solenoid field has been studied with particle-in-cell simulations. The main advantages of the Warp simulation suite that was used, relative to envelope or tracking codes, are the possibility of including all source parameters energy resolved, adding electrons as second species and considering the non-negligible space-charge forces and electrostatic self-fields. It was observed that the influence of the electrons is of vital importance. The magnetic effect on the electrons out balances the space-charge force. Hence, the electrons are forced onto the beam axis and attract protons. Besides the energy dependent proton density increase on axis, the change in the particle spectrum is also important for future applications. Protons are accelerated/decelerated slightly, electrons highly. 2/3 of all electrons get lost directly at the source and 27% of all protons hit the inner wall of the solenoid.

Dynamic simulation of hydrogen isotope distillation unit

International Nuclear Information System (INIS)

Le Lann, J.M.; Latge, C.; Joulia, X.; Sere-Peyrigain, P.

1995-01-01

Dynamic simulation of hydrogen isotope distillation unit involved in the complex environment of a fusion power plant can be a powerful technique in view to analyze the tritium hazard potential. In this paper, issues related to the development of such a dynamic simulator with model formulation and the numerical treatment of the resulting Differential-Algebraic equation (DAE) system are properly adressed. The typical dynamic characteristics of such columns are quantitatively and qualitatively enlighted on case study with very large disturbances. The developed system has proven to be beneficial for understanding the dynamic behaviour and further for developing control schemes. (orig.)

Dynamic simulation of hydrogen isotope distillation unit

International Nuclear Information System (INIS)

Le Lann, J.M.; Joulia, X.; Sere-Peyrigain, P.

1994-01-01

Dynamic simulation of hydrogen isotope distillation unit involved in the complex environment of a fusion power plant can be a powerful technique in view to analyze the tritium hazard potential. Issues related to the development of such a dynamic simulator with model formulation and the numerical treatment of the resulting Differential-Algebraic equation (DAE) system are properly addressed. The typical dynamic characteristics of such columns are quantitatively and qualitatively enlightened on case study with very large disturbances. The developed system has proven to be beneficial for understanding the dynamic behaviour and further for developing control schemes. (author) 12 refs.; 4 figs

Substructured multibody molecular dynamics.

Energy Technology Data Exchange (ETDEWEB)

Grest, Gary Stephen; Stevens, Mark Jackson; Plimpton, Steven James; Woolf, Thomas B. (Johns Hopkins University, Baltimore, MD); Lehoucq, Richard B.; Crozier, Paul Stewart; Ismail, Ahmed E.; Mukherjee, Rudranarayan M. (Rensselaer Polytechnic Institute, Troy, NY); Draganescu, Andrei I.

2006-11-01

We have enhanced our parallel molecular dynamics (MD) simulation software LAMMPS (Large-scale Atomic/Molecular Massively Parallel Simulator, lammps.sandia.gov) to include many new features for accelerated simulation including articulated rigid body dynamics via coupling to the Rensselaer Polytechnic Institute code POEMS (Parallelizable Open-source Efficient Multibody Software). We use new features of the LAMMPS software package to investigate rhodopsin photoisomerization, and water model surface tension and capillary waves at the vapor-liquid interface. Finally, we motivate the recipes of MD for practitioners and researchers in numerical analysis and computational mechanics.

Electromagnetic Structure and Electron Acceleration in Shock–Shock Interaction

Energy Technology Data Exchange (ETDEWEB)

Nakanotani, Masaru [Interdisciplinary Graduate School of Engineering Sciences, Kyushu University, 6-1 Kasuga-Koen, Kasuga, Fukuoka, 816-8580 (Japan); Matsukiyo, Shuichi; Hada, Tohru [Faculty of Engineering Sciences, Kyushu University, 6-1 Kasuga-Koen, Kasuga, Fukuoka, 816-8580 (Japan); Mazelle, Christian X., E-mail: nakanot@esst.kyushu-u.ac.jp [IRAP, Université Paul Sabatier Toulouse III-CNRS, F-31028 Toulouse Cedex 4 (France)

2017-09-10

A shock–shock interaction is investigated by using a one-dimensional full particle-in-cell simulation. The simulation reproduces the collision of two symmetrical high Mach number quasi-perpendicular shocks. The basic structure of the shocks and ion dynamics is similar to that obtained by previous hybrid simulations. The new aspects obtained here are as follows. Electrons are already strongly accelerated before the two shocks collide through multiple reflection. The reflected electrons self-generate waves upstream between the two shocks before they collide. The waves far upstream are generated through the right-hand resonant instability with the anomalous Doppler effect. The waves generated near the shock are due to firehose instability and have much larger amplitudes than those due to the resonant instability. The high-energy electrons are efficiently scattered by the waves so that some of them gain large pitch angles. Those electrons can be easily reflected at the shock of the other side. The accelerated electrons form a power-law energy spectrum. Due to the accelerated electrons, the pressure of upstream electrons increases with time. This appears to cause the deceleration of the approaching shock speed. The accelerated electrons having sufficiently large Larmor radii are further accelerated through the similar mechanism working for ions when the two shocks are colliding.

Dynamic skin deformation simulation using musculoskeletal model and soft tissue dynamics

Institute of Scientific and Technical Information of China (English)

Akihiko Murai; Q. Youn Hong; Katsu Yamane; Jessica K. Hodgins

2017-01-01

Deformation of skin and muscle is essential for bringing an animated character to life. This deformation is difficult to animate in a realistic fashion using traditional techniques because of the subtlety of the skin deformations that must move appropriately for the character design. In this paper, we present an algorithm that generates natural, dynamic, and detailed skin deformation (movement and jiggle) from joint angle data sequences. The algorithm has two steps: identification of parameters for a quasi-static muscle deformation model, and simulation of skin deformation. In the identification step, we identify the model parameters using a musculoskeletal model and a short sequence of skin deformation data captured via a dense marker set. The simulation step first uses the quasi-static muscle deformation model to obtain the quasi-static muscle shape at each frame of the given motion sequence (slow jump). Dynamic skin deformation is then computed by simulating the passive muscle and soft tissue dynamics modeled as a mass–spring–damper system. Having obtained the model parameters, we can simulate dynamic skin deformations for subjects with similar body types from new motion data. We demonstrate our method by creating skin deformations for muscle co-contraction and external impacts from four different behaviors captured as skeletal motion capture data. Experimental results show that the simulated skin deformations are quantitatively and qualitatively similar to measured actual skin deformations.

Dynamic skin deformation simulation using musculoskeletal model and soft tissue dynamics

Institute of Scientific and Technical Information of China (English)

Akihiko Murai; Q.Youn Hong; Katsu Yamane; Jessica K.Hodgins

2017-01-01

Deformation of skin and muscle is essential for bringing an animated character to life. This deformation is difficult to animate in a realistic fashion using traditional techniques because of the subtlety of the skin deformations that must move appropriately for the character design. In this paper, we present an algorithm that generates natural, dynamic, and detailed skin deformation(movement and jiggle) from joint angle data sequences. The algorithm has two steps: identification of parameters for a quasi-static muscle deformation model, and simulation of skin deformation. In the identification step, we identify the model parameters using a musculoskeletal model and a short sequence of skin deformation data captured via a dense marker set. The simulation step first uses the quasi-static muscle deformation model to obtain the quasi-static muscle shape at each frame of the given motion sequence(slow jump). Dynamic skin deformation is then computed by simulating the passive muscle and soft tissue dynamics modeled as a mass–spring–damper system. Having obtained the model parameters, we can simulate dynamic skin deformations for subjects with similar body types from new motion data. We demonstrate our method by creating skin deformations for muscle co-contraction and external impacts from four different behaviors captured as skeletal motion capture data. Experimental results show that the simulated skin deformations are quantitatively and qualitatively similar to measured actual skin deformations.

Effects of dynamical quarks in UKQCD simulations

International Nuclear Information System (INIS)

Allton, Chris

2002-01-01

Recent results from the UKQCD Collaboration's dynamical simulations are presented. The main feature of these ensembles is that they have a fixed lattice spacing and volume, but varying sea quark mass from infinite (corresponding to the quenched simulation) down to roughly that of the strange quark mass. The main aim of this work is to uncover dynamical quark effects from these 'matched' ensembles. We obtain some evidence of dynamical quark effects in the static quark potential with less effects in the hadronic spectrum

Research on the Frequency Aliasing of Resistance Acceleration Guidance for Reentry Flight

Directory of Open Access Journals (Sweden)

Han Pengxin

2017-01-01

Full Text Available According to the special response of resistance acceleration during hypersonic reentry flight, different guidance frequency will result to very different flight and control response. The analysis model for the response of resistance acceleration to the attack angle and dynamic press is put forward respectively in this paper. And the frequency aliasing phenomenon of guidance is revealed. The simulation results to the same vehicle sufficiently substantiate the frequency aliasing of resistance acceleration during reentry guidance.

Testing a Fourier Accelerated Hybrid Monte Carlo Algorithm

OpenAIRE

Catterall, S.; Karamov, S.

2001-01-01

We describe a Fourier Accelerated Hybrid Monte Carlo algorithm suitable for dynamical fermion simulations of non-gauge models. We test the algorithm in supersymmetric quantum mechanics viewed as a one-dimensional Euclidean lattice field theory. We find dramatic reductions in the autocorrelation time of the algorithm in comparison to standard HMC.

Integrating atomistic molecular dynamics simulations, experiments, and network analysis to study protein dynamics

DEFF Research Database (Denmark)

Papaleo, Elena

2015-01-01

that we observe and the functional properties of these important cellular machines. To make progresses in this direction, we need to improve the physical models used to describe proteins and solvent in molecular dynamics, as well as to strengthen the integration of experiments and simulations to overcome...... with the possibility to validate simulation methods and physical models against a broad range of experimental observables. On the other side, it also allows a complementary and comprehensive view on protein structure and dynamics. What is needed now is a better understanding of the link between the dynamic properties...... simulations with attention to the effects that can be propagated over long distances and are often associated to important biological functions. In this context, approaches inspired by network analysis can make an important contribution to the analysis of molecular dynamics simulations....

Design, simulation and fabrication of a novel contact-enhanced MEMS inertial switch with a movable contact point

International Nuclear Information System (INIS)

Cai Haogang; Ding Guifu; Yang Zhuoqing; Su Zhijuan; Zhou Jiansheng; Wang Hong

2008-01-01

A novel inertial switch based on a micro-electro-mechanical system (MEMS) was designed, which consists of three main parts: a proof mass as the movable electrode, a cross beam as the stationary electrode and a movable contact point to prolong the contact time. A MATLAB/Simulink model, which had been verified by comparison with ANSYS transient simulation, was built to simulate the dynamic response, based on which the contact-enhancing mechanism was confirmed and the dependence of threshold acceleration on the proof mass thickness was studied. The simulated dynamic responses under various accelerations exhibit satisfactory device behaviors: the switch-on time is prolonged under transient acceleration; the switch-on state is more continuous than the conventional design under long lasting acceleration. The inertial micro-switch was fabricated by multilayer electroplating technology and then tested by a drop hammer experiment. The test results indicate that the contact effect was improved significantly and a steady switch-on time of over 50 µs was observed under half-sine wave acceleration with 1 ms duration, in agreement with the dynamic simulation

Molecular dynamics simulations suggest that electrostatic funnel directs binding of Tamiflu to influenza N1 neuraminidases.

Directory of Open Access Journals (Sweden)

Ly Le

2010-09-01

Full Text Available Oseltamivir (Tamiflu is currently the frontline antiviral drug employed to fight the flu virus in infected individuals by inhibiting neuraminidase, a flu protein responsible for the release of newly synthesized virions. However, oseltamivir resistance has become a critical problem due to rapid mutation of the flu virus. Unfortunately, how mutations actually confer drug resistance is not well understood. In this study, we employ molecular dynamics (MD and steered molecular dynamics (SMD simulations, as well as graphics processing unit (GPU-accelerated electrostatic mapping, to uncover the mechanism behind point mutation induced oseltamivir-resistance in both H5N1 "avian" and H1N1pdm "swine" flu N1-subtype neuraminidases. The simulations reveal an electrostatic binding funnel that plays a key role in directing oseltamivir into and out of its binding site on N1 neuraminidase. The binding pathway for oseltamivir suggests how mutations disrupt drug binding and how new drugs may circumvent the resistance mechanisms.

Fourier-accelerated Langevin simulation of the frustrated XY model and simulation of the spinless and spin one-half Hubbard model

International Nuclear Information System (INIS)

Scheinine, A.L.

1992-01-01

The frustrated XY model was studied on a lattice, primarily to test Fourier transform acceleration technique for a phase transition having more field structure than just spinwaves and vortices. Also, the spinless Hubbard model without hopping was simulated using continuous variables for the auxiliary field that mediates coupling between fermions. Finally, spin one-half Hubbard model was studied with a technique that sampled the fermion occupation configurations. The frustrated two-dimensional XY model was simulated using the Langevin equation with Fourier transform acceleration. Speedup due to Fourier acceleration was measured for frustration one-half at the transition temperature. The unfrustrated XY model was also studied. For the frustrated case, only long-distance spin correlation and the autocorrelation of the spin showed significant speedup. The frustrated case has Ising-like domains. It was found that Fourier acceleration speeds the evolution of spinwaves but has negligible effect on the Ising-like domains. In the Hubbard model, fermion determinant weight factor in the partition function changes sign, causing large statistical fluctuations of observables. A technique was found for sampling configuration space using continuous auxiliary fields, despite energy barriers where the fermion determinant changes sign. For two-dimensional spinless Hubbard model with no hopping, an exact solution was found for a 4 x 4 lattice; which could be compared to numerical simulations. The sign problem remained, and was found to be related to the sign problem encountered when a discrete variable is used for the auxiliary field. For spin one-half Hubbard model, a Monte Carlo simulation was done in which the fermion occupation configurations were varied. Rather than integrate-out the fermions and make a numerical estimate of the sum over the auxiliary field, the auxiliary field was integrated-out and a numerical estimate was made of the sum over fermion configurations

Development of RFQ particle dynamics simulation tools and validation with beam tests

Energy Technology Data Exchange (ETDEWEB)

Maus, Johannes M.

2010-07-01

Two different strategies of designing RFQs have been introduced. The analytic description of the electric fields inside the quadrupole channel has been derived and the two term simplification was shown as well as the limitation of these approaches. The main work of this thesis was the implementation and analysis of a multigrid Poisson solver to describe the potential and electric field of RFQs which are needed to simulate the particle dynamics accurately. The main two ingredients of a multigrid Poisson solver are the ability of a Gauss-Seidel iteration method to smooth the error of an approximation within a few iteration steps and the coarse grid principle. The smoothing corresponds to a damping of the high frequency components of the error. After the smoothing, the error term can well be approximated on a coarser grid in which the low frequency components of the error on the fine grid are converted to high frequency errors on the coarse grid which can be damped further with the same Gauss-Seidel method. After implementation, the multigrid Poisson solver was analyzed using two different type of test problems: with and without a charge density. As a charge density, a homogeneously charged ball and cylinder were used to represent the bunched and unbunched beam and placed inside a quadruple channel. The solver showed a good performance. Next, the performance of the solver to calculate the external potentials (and fields) of RFQs was analyzed. Closing the analysis of the external field, the transmission and fraction of accelerated particles of the set of 12 RFQs for the two different methods were shown. In the last chapter of this thesis some experimental work on the MAFF (Munich Accelerator for Fission Fragments) IH-RFQ is described. The MAFF RFQ was designed to accelerate very neutron-rich fission fragments for various experiments. The machine was assembled in Frankfurt and a beam test stand was built. As a part of this thesis the shunt impedance of the structure was

Development of RFQ particle dynamics simulation tools and validation with beam tests

International Nuclear Information System (INIS)

Maus, Johannes M.

2010-01-01

Two different strategies of designing RFQs have been introduced. The analytic description of the electric fields inside the quadrupole channel has been derived and the two term simplification was shown as well as the limitation of these approaches. The main work of this thesis was the implementation and analysis of a multigrid Poisson solver to describe the potential and electric field of RFQs which are needed to simulate the particle dynamics accurately. The main two ingredients of a multigrid Poisson solver are the ability of a Gauss-Seidel iteration method to smooth the error of an approximation within a few iteration steps and the coarse grid principle. The smoothing corresponds to a damping of the high frequency components of the error. After the smoothing, the error term can well be approximated on a coarser grid in which the low frequency components of the error on the fine grid are converted to high frequency errors on the coarse grid which can be damped further with the same Gauss-Seidel method. After implementation, the multigrid Poisson solver was analyzed using two different type of test problems: with and without a charge density. As a charge density, a homogeneously charged ball and cylinder were used to represent the bunched and unbunched beam and placed inside a quadruple channel. The solver showed a good performance. Next, the performance of the solver to calculate the external potentials (and fields) of RFQs was analyzed. Closing the analysis of the external field, the transmission and fraction of accelerated particles of the set of 12 RFQs for the two different methods were shown. In the last chapter of this thesis some experimental work on the MAFF (Munich Accelerator for Fission Fragments) IH-RFQ is described. The MAFF RFQ was designed to accelerate very neutron-rich fission fragments for various experiments. The machine was assembled in Frankfurt and a beam test stand was built. As a part of this thesis the shunt impedance of the structure was

Betatron radiation from a laser-plasma accelerator

International Nuclear Information System (INIS)

Schnell, Michael

2014-01-01

The presented thesis investigates the processes which lead to the generation of highenergetic X-ray radiation, also known as ''betatron radiation'', by means of a relativistic laser-plasma interaction. The generated betatron radiation has been extensively characterized by measuring its radiated intensity, energy distribution, far-field beam profile, and source size. It was shown for the first time that betatron radiation can be used as a non-invasive diagnostic tool to retrieve very subtle information on the electron acceleration dynamics within the plasma wave. Furthermore, a compact polarimeter setup has been developed in a unique experiment in which the polarization state of the laser-plasma generated betatron radiation was measured in single-shot mode. This lead to a detailed study of the orientation of the electron trajectory within the plasma interaction. By controlling the injection of the electrons into the plasma wave it was demonstrated that one can tune the polarization state of the emitted X-rays. This result is very promising for further applications, particularly for feeding the electrons into an additional conventional accelerator or a permanent magnet based undulator for the production of intense X-ray beams. During this work, the experimental setup for accelerating electrons and generating high-energy X-ray beams was consistently improved: to enhance both its reliability and stability. Subsequently, the betatron radiation was used as a reliable diagnostic tool of the electron dynamics within the plasma. Parallel to the experimental work, 3-Dimensional Particle-In-Cell (3D-PlC) simulations were performed together with colleagues from the University of Duesseldorf. The simulations included the electron acceleration and the X-ray generation processes together with the recoil force acting on an accelerating electron caused by the emitted radiation during which one can also ascertain its polarization state. The simulations proved to be in good agreement

A LEGO paradigm for virtual accelerator concept

International Nuclear Information System (INIS)

Andrianov, S.; Ivanov, A.; Podzyvalov, E.

2012-01-01

The paper considers basic features of a Virtual Accelerator concept based on LEGO paradigm. This concept involves three types of components: different mathematical models for accelerator design problems, integrated beam simulation packages (i. e. COSY, MAD, OptiM and others), and a special class of virtual feedback instruments similar to real control systems (EPICS). All of these components should inter-operate for more complete analysis of control systems and increased fault tolerance. The Virtual Accelerator is an information and computing environment which provides a framework for analysis based on these components that can be combined in different ways. Corresponding distributed computing services establish interaction between mathematical models and low level control system. The general idea of the software implementation is based on the Service-Oriented Architecture (SOA) that allows using cloud computing technology and enables remote access to the information and computing resources. The Virtual Accelerator allows a designer to combine powerful instruments for modeling beam dynamics in a friendly way including both self-developed and well-known packages. In the scope of this concept the following is also proposed: the control system identification, analysis and result verification, visualization as well as virtual feedback for beam line operation. The architecture of the Virtual Accelerator system itself and results of beam dynamics studies are presented. (authors)

Lattice dynamics and molecular dynamics simulation of complex materials

International Nuclear Information System (INIS)

Chaplot, S.L.

1997-01-01

In this article we briefly review the lattice dynamics and molecular dynamics simulation techniques, as used for complex ionic and molecular solids, and demonstrate a number of applications through examples of our work. These computational studies, along with experiments, have provided microscopic insight into the structure and dynamics, phase transitions and thermodynamical properties of a variety of materials including fullerene, high temperature superconducting oxides and geological minerals as a function of pressure and temperature. The computational techniques also allow the study of the structures and dynamics associated with disorder, defects, surfaces, interfaces etc. (author)

Particle Acceleration, Magnetic Field Generation in Relativistic Shocks

Science.gov (United States)

Nishikawa, Ken-Ichi; Hardee, P.; Hededal, C. B.; Richardson, G.; Sol, H.; Preece, R.; Fishman, G. J.

2005-01-01

Shock acceleration is an ubiquitous phenomenon in astrophysical plasmas. Plasma waves and their associated instabilities (e.g., the Buneman instability, two-streaming instability, and the Weibel instability) created in the shocks are responsible for particle (electron, positron, and ion) acceleration. Using a 3-D relativistic electromagnetic particle (REMP) code, we have investigated particle acceleration associated with a relativistic jet front propagating through an ambient plasma with and without initial magnetic fields. We find only small differences in the results between no ambient and weak ambient parallel magnetic fields. Simulations show that the Weibel instability created in the collisionless shock front accelerates particles perpendicular and parallel to the jet propagation direction. New simulations with an ambient perpendicular magnetic field show the strong interaction between the relativistic jet and the magnetic fields. The magnetic fields are piled up by the jet and the jet electrons are bent, which creates currents and displacement currents. At the nonlinear stage, the magnetic fields are reversed by the current and the reconnection may take place. Due to these dynamics the jet and ambient electron are strongly accelerated in both parallel and perpendicular directions.

Radio Evolution of Supernova Remnants Including Nonlinear Particle Acceleration: Insights from Hydrodynamic Simulations

Science.gov (United States)

Pavlović, Marko Z.; Urošević, Dejan; Arbutina, Bojan; Orlando, Salvatore; Maxted, Nigel; Filipović, Miroslav D.

2018-01-01

We present a model for the radio evolution of supernova remnants (SNRs) obtained by using three-dimensional hydrodynamic simulations coupled with nonlinear kinetic theory of cosmic-ray (CR) acceleration in SNRs. We model the radio evolution of SNRs on a global level by performing simulations for a wide range of the relevant physical parameters, such as the ambient density, supernova (SN) explosion energy, acceleration efficiency, and magnetic field amplification (MFA) efficiency. We attribute the observed spread of radio surface brightnesses for corresponding SNR diameters to the spread of these parameters. In addition to our simulations of Type Ia SNRs, we also considered SNR radio evolution in denser, nonuniform circumstellar environments modified by the progenitor star wind. These simulations start with the mass of the ejecta substantially higher than in the case of a Type Ia SN and presumably lower shock speed. The magnetic field is understandably seen as very important for the radio evolution of SNRs. In terms of MFA, we include both resonant and nonresonant modes in our large-scale simulations by implementing models obtained from first-principles, particle-in-cell simulations and nonlinear magnetohydrodynamical simulations. We test the quality and reliability of our models on a sample consisting of Galactic and extragalactic SNRs. Our simulations give Σ ‑ D slopes between ‑4 and ‑6 for the full Sedov regime. Recent empirical slopes obtained for the Galactic samples are around ‑5, while those for the extragalactic samples are around ‑4.

Systemic Analysis, Mapping, Modeling, and Simulation of the Advanced Accelerator Applications Program

International Nuclear Information System (INIS)

Guan, Yue; Laidler, James J.; Morman, James A.

2002-01-01

Advanced chemical separations methods envisioned for use in the Department of Energy Advanced Accelerator Applications (AAA) program have been studied using the Systemic Analysis, Mapping, Modeling, and Simulation (SAMMS) method. This integrated and systematic method considers all aspects of the studied process as one dynamic and inter-dependent system. This particular study focuses on two subjects: the chemical separation processes for treating spent nuclear fuel, and the associated non-proliferation implications of such processing. Two levels of chemical separation models are developed: level 1 models treat the chemical process stages by groups; and level 2 models depict the details of each process stage. Models to estimate the proliferation risks based on proliferation barrier assessment are also developed. This paper describes the research conducted for the single-stratum design in the AAA program. Further research conducted for the multi-strata designs will be presented later. The method and models described in this paper can help in the design of optimized processes that fulfill the chemical separation process specifications and non-proliferation requirements. (authors)

Beam trajectory simulation program at the National Institute of Nuclear Research Tandem Accelerator facility

International Nuclear Information System (INIS)

Murillo C, G.

1996-01-01

The main object of this thesis is to show in a clear and simple way to the people in general, the function of the Tandem Accelerator located on site the ININ facilities. For this presentation, a computer program was developed. The software written in C language in a structural form, simulates the ion production and its trajectory in a schematic and in an easy way to comprehend. According to the goals of this work, the simulation also shows details of some of the machine components like the source, the accelerator cavity, ,and the bombarding chamber. Electric and magnetic fields calculations are included for the 90 degrees bending magnet and quadrupoles. (Author)

Simulation of the biomass dynamics of Masson pine forest under different management

Institute of Scientific and Technical Information of China (English)

ZHANG Gui-lian; WANG Kai-yun; LIU Xin-wei; PENG Shao-lin

2006-01-01

TREE submodel affiliated with TREEDYN was used to simulate biomass dynamics of Masson pine (Pinus massoniana) forest under different managements (including thinning, clear cutting, combining thinning with clear cutting). The purpose was to represent biomass dynamics involved in its development, which can provide scientific arguments for management of Masson pine forest. The results showed the scenario that 10% or 20% of biomass of the previous year was thinned every five years from 15 to 40 years made total biomass of pine forest increase slowly and it took more time to reach a mature community; If clear cutting and thinning were combined, the case C (clear cutting at 20 years of forest age, thinning 50% of remaining biomass at 30 years of forest age, and thinning 50% of remaining biomass again at 40 years of forest age) was the best scenario which can accelerate speed of development of Masson pine forest and gained better economic values.

Selecting a Dynamic Simulation Modeling Method for Health Care Delivery Research—Part 2: Report of the ISPOR Dynamic Simulation Modeling Emerging Good Practices Task Force

NARCIS (Netherlands)

Marshall, Deborah A.; Burgos-Liz, Lina; IJzerman, Maarten Joost; Crown, William; Padula, William V.; Wong, Peter K.; Pasupathy, Kalyan S.; Higashi, Mitchell K.; Osgood, Nathaniel D.

2015-01-01

In a previous report, the ISPOR Task Force on Dynamic Simulation Modeling Applications in Health Care Delivery Research Emerging Good Practices introduced the fundamentals of dynamic simulation modeling and identified the types of health care delivery problems for which dynamic simulation modeling

Head simulation of linear accelerators and spectra considerations using EGS4 Monte Carlo code in a PC

Energy Technology Data Exchange (ETDEWEB)

Malatara, G; Kappas, K [Medical Physics Department, Faculty of Medicine, University of Patras, 265 00 Patras (Greece); Sphiris, N [Ethnodata S.A., Athens (Greece)

1994-12-31

In this work, a Monte Carlo EGS4 code was used to simulate radiation transport through linear accelerators to produce and score energy spectra and angular distributions of 6, 12, 15 and 25 MeV bremsstrahlung photons exiting from different accelerator treatment heads. The energy spectra was used as input for a convolution method program to calculate the tissue-maximum ratio in water. 100.000 histories are recorded in the scoring plane for each simulation. The validity of the Monte Carlo simulation and the precision to the calculated spectra have been verified experimentally and were in good agreement. We believe that the accurate simulation of the different components of the linear accelerator head is very important for the precision of the results. The results of the Monte Carlo and the Convolution Method can be compared with experimental data for verification and they are powerful and practical tools to generate accurate spectra and dosimetric data. (authors). 10 refs,5 figs, 2 tabs.

Head simulation of linear accelerators and spectra considerations using EGS4 Monte Carlo code in a PC

International Nuclear Information System (INIS)

Malatara, G.; Kappas, K.; Sphiris, N.

1994-01-01

In this work, a Monte Carlo EGS4 code was used to simulate radiation transport through linear accelerators to produce and score energy spectra and angular distributions of 6, 12, 15 and 25 MeV bremsstrahlung photons exiting from different accelerator treatment heads. The energy spectra was used as input for a convolution method program to calculate the tissue-maximum ratio in water. 100.000 histories are recorded in the scoring plane for each simulation. The validity of the Monte Carlo simulation and the precision to the calculated spectra have been verified experimentally and were in good agreement. We believe that the accurate simulation of the different components of the linear accelerator head is very important for the precision of the results. The results of the Monte Carlo and the Convolution Method can be compared with experimental data for verification and they are powerful and practical tools to generate accurate spectra and dosimetric data. (authors)

Electron beam dynamics in the long-pulse, high-current DARHT-II linear induction accelerator

International Nuclear Information System (INIS)

Ekdahl, Carl A.; Abeyta, Epifanio O.; Aragon, Paul; Archuleta, Rita; Cook, Gerald; Dalmas, Dale; Esquibel, Kevin; Gallegos, Robert A.; Garnett, Robert; Harrison, James F.; Johnson, Jeffrey B.; Jacquez, Edward B.; Mccuistian, Brian T.; Montoya, Nicholas A.; Nath, Subrato; Nielsen, Kurt; Oro, David; Prichard, Benjamin; Rowton, Lawrence; Sanchez, Manolito; Scarpetti, Raymond; Schauer, Martin M.; Seitz, Gerald; Schulze, Martin; Bender, Howard A.; Broste, William B.; Carlson, Carl A.; Frayer, Daniel K.; Johnson, Douglas E.; Tom, C.Y.; Williams, John; Hughes, Thomas; Anaya, Richard; Caporaso, George; Chambers, Frank; Chen, Yu-Jiuan; Falabella, Steve; Guethlein, Gary; Raymond, Brett; Richardson, Roger; Trainham, C.; Watson, Jim; Weir, John; Genoni, Thomas; Toma, Carsten

2009-01-01

The DARHT-II linear induction accelerator (LIA) now accelerates 2-kA electron beams to more than 17 MeV. This LIA is unique in that the accelerated current pulse width is greater than 2 microseconds. This pulse has a flat-top region where the final electron kinetic energy varies by less than 1% for more than 1.5 microseconds. The long risetime of the 6-cell injector current pulse is 0.5 (micro)s, which can be scraped off in a beam-head cleanup zone before entering the 68-cell main accelerator. We discuss our experience with tuning this novel accelerator; and present data for the resulting beam transport and dynamics. We also present beam stability data, and relate these to previous stability experiments at lower current and energy.

A Novel Guidance Law with Line-of-Sight Acceleration Feedback for Missiles against Maneuvering Targets

Directory of Open Access Journals (Sweden)

Kemao Ma

2014-01-01

Full Text Available Terminal guidance law design and its implementation are considered for homing missiles against maneuvering targets. The lateral acceleration dynamics are taken into account in the design. In the guidance law design, the line-of-sight acceleration signals are incorporated into the acceleration reference signals to compensate for the targets’ maneuvers. Then the commanded accelerations are designed and the convergent tracking of the lateral accelerations to these signals is proven theoretically. In the guidance implementation, a linear high-gain differentiator is used to estimate the line-of-sight rates and the line-of-sight acceleration signals. To avoid the magnifying effects of higher order differentiation, a practical design of commanded accelerations is given to realize approximate tracking of the lateral accelerations to the given reference signals. Simulation is conducted for both cases with and without measurement noises. The simulation results justify the feasibility of the design and the implementation.

Identification of Dynamic Flow Stress Curves Using the Virtual Fields Methods: Theoretical Feasibility Analysis

Science.gov (United States)

Leem, Dohyun; Kim, Jin-Hwan; Barlat, Frédéric; Song, Jung Han; Lee, Myoung-Gyu

2018-03-01

An inverse approach based on the virtual fields method (VFM) is presented to identify the material hardening parameters under dynamic deformation. This dynamic-VFM (D-VFM) method does not require load information for the parameter identification. Instead, it utilizes acceleration fields in a specimen's gage region. To investigate the feasibility of the proposed inverse approach for dynamic deformation, the virtual experiments using dynamic finite element simulations were conducted. The simulation could provide all the necessary data for the identification such as displacement, strain, and acceleration fields. The accuracy of the identification results was evaluated by changing several parameters such as specimen geometry, velocity, and traction boundary conditions. The analysis clearly shows that the D-VFM which utilizes acceleration fields can be a good alternative to the conventional identification procedure that uses load information. Also, it was found that proper deformation conditions are required for generating sufficient acceleration fields during dynamic deformation to enhance the identification accuracy with the D-VFM.

Numerical simulation on beam breakup unstability of linear induction accelerator

International Nuclear Information System (INIS)

Zhang Kaizhi; Wang Huacen; Lin Yuzheng

2003-01-01

A code is written to simulate BBU in induction linac according to theoretical analysis. The general form of evolution of BBU in induction linac is investigated at first, then the effect of related parameters on BBU is analyzed, for example, the alignment error, oscillation frequency of beam centroid, beam pulse shape and acceleration gradient. At last measures are put forward to damp beam breakup unstability (BBU)

Evaluation of a server-client architecture for accelerator modeling and simulation

International Nuclear Information System (INIS)

Bowling, B.A.; Akers, W.; Shoaee, H.; Watson, W.; Zeijts, J. van; Witherspoon, S.

1997-01-01

Traditional approaches to computational modeling and simulation often utilize a batch method for code execution using file-formatted input/output. This method of code implementation was generally chosen for several factors, including CPU throughput and availability, complexity of the required modeling problem, and presentation of computation results. With the advent of faster computer hardware and the advances in networking and software techniques, other program architectures for accelerator modeling have recently been employed. Jefferson Laboratory has implemented a client/server solution for accelerator beam transport modeling utilizing a query-based I/O. The goal of this code is to provide modeling information for control system applications and to serve as a computation engine for general modeling tasks, such as machine studies. This paper performs a comparison between the batch execution and server/client architectures, focusing on design and implementation issues, performance, and general utility towards accelerator modeling demands

Inductive and electrostatic acceleration in relativistic jet-plasma interactions.

Science.gov (United States)

Ng, Johnny S T; Noble, Robert J

2006-03-24

We report on the observation of rapid particle acceleration in numerical simulations of relativistic jet-plasma interactions and discuss the underlying mechanisms. The dynamics of a charge-neutral, narrow, electron-positron jet propagating through an unmagnetized electron-ion plasma was investigated using a three-dimensional, electromagnetic, particle-in-cell computer code. The interaction excited magnetic filamentation as well as electrostatic plasma instabilities. In some cases, the longitudinal electric fields generated inductively and electrostatically reached the cold plasma-wave-breaking limit, and the longitudinal momentum of about half the positrons increased by 50% with a maximum gain exceeding a factor of 2 during the simulation period. Particle acceleration via these mechanisms occurred when the criteria for Weibel instability were satisfied.

Dynamic modelling and simulation for control of a cylindrical robotic manipulator

International Nuclear Information System (INIS)

Iqbal, A.; Athar, S.M.

1995-03-01

In this report a dynamic model for the three degrees-of-freedom cylindrical manipulator, INFOMATE has been developed. Although the robot dynamics are highly coupled and non-linear, the developed model is relatively straight forward and compact for control engineering and simulation applications. The model has been simulated using the graphical simulation package SIMULINK. Different aspects of INFOMATE associated with forward dynamics, inverse dynamics and control have been investigated by performing various simulation experiments. These simulation experiments confirm the accuracy and applicability of the dynamic robot model. (author) 18 figs

W-band accelerator study in KEK

International Nuclear Information System (INIS)

Zhu Xiongwei; Nakajima, Kazuhisa

2001-01-01

In this paper, we summarize the W-band accelerator study in KEK. We present a design study on W-Band photocathode RF gun which is capable of generating and accelerating 300 pC electron bunch. The design system is made up of 91.392 GHz photocathode RF gun and 91.392 GHz traveling wave linac cells. Based on the numerical simulation using SUPERFISH and PARMELA and the conventional RF linac scaling law, the design will produce 300 pC at 1.74 MeV with bunch length 0.72 ps and normalized transverse emittance 0.55 mm mrad. We study the beam dynamics in high frequency and high gradient; due to the high gradient, the pondermotive effect plays an important role in beam dynamics; we found the pondermotive effect still exist with only the fundamental space harmonics (synchrotron mode) due to the coupling of the transverse and longitudinal motion

Design and simulation of a 1.2MeV electron accelerator used for desulfuration and denitrogenation

Energy Technology Data Exchange (ETDEWEB)

Zhou, J.; Zhu, D.J.; Liu, S.G.; Wang, H.B.; Xu, Z.; Liu, X.S. [University of Electrical Science & Technology of China, Chengdu (China)

2005-07-01

This paper presents the structural design and functional analysis of a new kind of 1.2MeV industrial electron accelerator. PIC (Particle-In-Cell) method is used to simulate this accelerator and to optimize the design. The results show that the optics property of this accelerator has been improved. This electron accelerator is used for desulfurisation and denitrification in environmental industry. This application purifies flue gases of the thermal power stations from sulphur oxide and nitrogen oxides in order to reduce air pollution.

Molecular Dynamics Simulations of Silica Nanoparticles Grafted with Poly(ethylene oxide) Oligomer Chains

KAUST Repository

Hong, Bingbing

2012-03-01

A molecular model of silica nanoparticles grafted with poly(ethylene oxide) oligomers has been developed for predicting the transport properties of nanoparticle organic-hybrid materials (NOHMs). Ungrafted silica nanoparticles in a medium of poly(ethylene oxide) oligomers were also simulated to clarify the effect of grafting on the dynamics of nanoparticles and chains. The model approximates nanoparticles as solid spheres and uses a united-atom representation for chains, including torsional and bond-bending interactions. The calculated viscosities from Green-Kubo relationships and temperature extrapolation are of the same order of magnitude as experimental data but show a smaller activation energy relative to real NOHMs systems. Grafted systems have higher viscosities, smaller diffusion coefficients, and slower chain dynamics than the ungrafted ones at high temperatures. At lower temperatures, grafted systems exhibit faster dynamics for both nanoparticles and chains relative to ungrafted systems, because of lower aggregation of particles and enhanced correlations between nanoparticles and chains. This agrees with the experimental observation that NOHMs have liquidlike behavior in the absence of a solvent. For both grafted and ungrafted systems at low temperatures, increasing chain length reduces the volume fraction of nanoparticles and accelerates the dynamics. However, at high temperatures, longer chains slow down nanoparticle diffusion. From the Stokes-Einstein relationship, it was determined that the coarse-grained treatment of nanoparticles leads to slip on the nanoparticle surfaces. Grafted systems obey the Stokes-Einstein relationship over the temperature range simulated, but ungrafted systems display deviations from it. © 2012 American Chemical Society.

Electron beam dynamics in the LIU-30/250 accelerator

International Nuclear Information System (INIS)

Vakhrushin, Yu.P.; Kuznetsov, V.S.; Tikhomirov, A.S.

1989-01-01

Results of numerical simulation of coherent oscillations of electron beam in the LIU-30/250 accelerating system are presented. Transport systems both with continuous field and the discrete ones are considered. The following conclusions are made: amplitude of coherent oscillations inevitably grows in the real transport channel; the presence of correctors can lead to sufficient losses of beam pulse duration; discrete system is the optimal system for beam transport without sufficient losses. 7 refs.; 3 figs

IFMIF accelerators design

International Nuclear Information System (INIS)

Mosnier, A.; Ratzinger, U.

2008-01-01

The IFMIF requirement for 250 mA current of deuteron beams at a nominal energy of 40 MeV is met by means of two identical continuous wave (CW) 175 MHz linear accelerators running in parallel, each delivering a 125 mA, 40 MeV deuteron beam to the common target. This approach allows to stay within the current capability of present RF linac technology while providing operational redundancy in case of failure of one of the linacs. Each linac comprises a sequence of acceleration and beam transport/matching stages. The ion source generates a 140 mA deuteron beam at 100 keV. A low energy beam transport (LEBT) transfers the deuteron beam from the source to a radio frequency quadrupole (RFQ) cavity. The RFQ bunches and accelerates the 125 mA beam to 5 MeV. The RFQ output beam is injected through a matching section into a drift-tube-linac (DTL) where it is accelerated to the final energy of 40 MeV. In the reference design, the final acceleration stage is a conventional Alvarez-type DTL with post-couplers operating at room temperature. Operation of both the RFQ and the DTL at the same relatively low frequency is essential for accelerating the high current deuteron beam with low beam loss. The primary concern of the IFMIF linacs is the minimization of beam losses, which could limit their availability and maintainability due to excessive activation of the linac and irradiation of the environment. A careful beam dynamics design is therefore needed from the source to the target to avoid the formation of particle halo that could finally be lost in the linac or transfer lines. A superconducting solution for the high energy portion of the linac using, for example, CH-structure or coaxial-type resonators, could offer some advantages, in particular the reduction of operational costs. Careful beam dynamics simulations and comparison tests with beam during the EVEDA phase are however necessary in order to fully assess the technical feasibility of such alternative solutions

Measurements and simulation of controlled beamfront motion in the Laser Controlled Collective Accelerator

International Nuclear Information System (INIS)

Yao, R.L.; Destler, W.W.; Striffler, C.D.; Rodgers, J.; Scgalov, Z.

1989-01-01

In the Laser Controlled Collective Accelerator, an intense electron beam is injected at a current above the vacuum space charge limit into an initially evacuated drift tube. A plasma channel, produced by time-sequenced, multiple laser beam ionization of a solid target on the drift tube wall, provides the necessary neutralization to allow for effective beam propagation. By controlling the rate of production of the plasma channel as a function of time down the drift tube, control of the electron beamfront can be achieved. Recent experimental measurements of controlled beamfront motion in this configuration are presented, along with results of ion acceleration experiments conducted using two different accelerating gradients. These results are compared with numerical simulations of the system in which both controlled beamfront motion and ion acceleration is observed consistent with both design expectations and experimental results. 5 refs., 6 figs

Numerical simulations of intense charged particle beam propagation in a dielectric wakefield accelerator

International Nuclear Information System (INIS)

Gai, W.; Kanareykin, A.D.; Kustov, A.L.; Simpson, J.

1995-01-01

The propagation of an intense electron beam through a long dielectric tube is a critical issue for the success of the dielectric wakefield acceleration scheme. Due to the head-tail instability, a high current charged particle beam cannot propagate long distance without external focusing. In this paper we examine the beam handling and control problem in the dielectric wakefield accelerator. We show that for the designed 15.6 GHz and 20 GHz dielectric structures a 150 MeV, 40 endash 100 nC beam can be controlled and propagate up to 5 meters without significant particle losses by using external applied focusing and defocusing channel (FODO) around the dielectric tube. Particle dynamics of the accelerated beam is also studied. Our results show that for typical dielectric acceleration structures, the head-tail instabilities can be conveniently controlled in the same way as the driver beam. copyright 1995 American Institute of Physics

Quench simulations for superconducting elements in the LHC accelerator

Science.gov (United States)

Sonnemann, F.; Schmidt, R.

2000-08-01

The design of the protection system for the superconducting elements in an accelerator such as the large Hadron collider (LHC), now under construction at CERN, requires a detailed understanding of the thermo-hydraulic and electrodynamic processes during a quench. A numerical program (SPQR - simulation program for quench research) has been developed to evaluate temperature and voltage distributions during a quench as a function of space and time. The quench process is simulated by approximating the heat balance equation with the finite difference method in presence of variable cooling and powering conditions. The simulation predicts quench propagation along a superconducting cable, forced quenching with heaters, impact of eddy currents induced by a magnetic field change, and heat transfer through an insulation layer into helium, an adjacent conductor or other material. The simulation studies allowed a better understanding of experimental quench data and were used for determining the adequate dimensioning and protection of the highly stabilised superconducting cables for connecting magnets (busbars), optimising the quench heater strip layout for the main magnets, and studying quench back by induced eddy currents in the superconductor. After the introduction of the theoretical approach, some applications of the simulation model for the LHC dipole and corrector magnets are presented and the outcome of the studies is compared with experimental data.

Real time simulation method for fast breeder reactors dynamics

International Nuclear Information System (INIS)

Miki, Tetsushi; Mineo, Yoshiyuki; Ogino, Takamichi; Kishida, Koji; Furuichi, Kenji.

1985-01-01

The development of multi-purpose real time simulator models with suitable plant dynamics was made; these models can be used not only in training operators but also in designing control systems, operation sequences and many other items which must be studied for the development of new type reactors. The prototype fast breeder reactor ''Monju'' is taken as an example. Analysis is made on various factors affecting the accuracy and computer load of its dynamic simulation. A method is presented which determines the optimum number of nodes in distributed systems and time steps. The oscillations due to the numerical instability are observed in the dynamic simulation of evaporators with a small number of nodes, and a method to cancel these oscillations is proposed. It has been verified through the development of plant dynamics simulation codes that these methods can provide efficient real time dynamics models of fast breeder reactors. (author)

Stabilities and Dynamics of Protein Folding Nuclei by Molecular Dynamics Simulation

Science.gov (United States)

Song, Yong-Shun; Zhou, Xin; Zheng, Wei-Mou; Wang, Yan-Ting

2017-07-01

To understand how the stabilities of key nuclei fragments affect protein folding dynamics, we simulate by molecular dynamics (MD) simulation in aqueous solution four fragments cut out of a protein G, including one α-helix (seqB: KVFKQYAN), two β-turns (seqA: LNGKTLKG and seqC: YDDATKTF), and one β-strand (seqD: DGEWTYDD). The Markov State Model clustering method combined with the coarse-grained conformation letters method are employed to analyze the data sampled from 2-μs equilibrium MD simulation trajectories. We find that seqA and seqB have more stable structures than their native structures which become metastable when cut out of the protein structure. As expected, seqD alone is flexible and does not have a stable structure. Throughout our simulations, the native structure of seqC is stable but cannot be reached if starting from a structure other than the native one, implying a funnel-shape free energy landscape of seqC in aqueous solution. All the above results suggest that different nuclei have different formation dynamics during protein folding, which may have a major contribution to the hierarchy of protein folding dynamics. Supported by the National Basic Research Program of China under Grant No. 2013CB932804, the National Natural Science Foundation of China under Grant No. 11421063, and the CAS Biophysics Interdisciplinary Innovation Team Project

Approximation of quantum observables by molecular dynamics simulations

KAUST Repository

Sandberg, Mattias

2016-01-01

In this talk I will discuss how to estimate the uncertainty in molecular dynamics simulations. Molecular dynamics is a computational method to study molecular systems in materials science, chemistry, and molecular biology. The wide popularity of molecular dynamics simulations relies on the fact that in many cases it agrees very well with experiments. If we however want the simulation to predict something that has no comparing experiment, we need a mathematical estimate of the accuracy of the computation. In the case of molecular systems with few particles, such studies are made by directly solving the Schrodinger equation. In this talk I will discuss theoretical results on the accuracy between quantum mechanics and molecular dynamics, to be used for systems that are too large to be handled computationally by the Schrodinger equation.

Approximation of quantum observables by molecular dynamics simulations

KAUST Repository

Sandberg, Mattias

2016-01-06

In this talk I will discuss how to estimate the uncertainty in molecular dynamics simulations. Molecular dynamics is a computational method to study molecular systems in materials science, chemistry, and molecular biology. The wide popularity of molecular dynamics simulations relies on the fact that in many cases it agrees very well with experiments. If we however want the simulation to predict something that has no comparing experiment, we need a mathematical estimate of the accuracy of the computation. In the case of molecular systems with few particles, such studies are made by directly solving the Schrodinger equation. In this talk I will discuss theoretical results on the accuracy between quantum mechanics and molecular dynamics, to be used for systems that are too large to be handled computationally by the Schrodinger equation.

Equivalence of Brownian dynamics and dynamic Monte Carlo simulations in multicomponent colloidal suspensions.

Science.gov (United States)

Cuetos, Alejandro; Patti, Alessandro

2015-08-01

We propose a simple but powerful theoretical framework to quantitatively compare Brownian dynamics (BD) and dynamic Monte Carlo (DMC) simulations of multicomponent colloidal suspensions. By extending our previous study focusing on monodisperse systems of rodlike colloids, here we generalize the formalism described there to multicomponent colloidal mixtures and validate it by investigating the dynamics in isotropic and liquid crystalline phases containing spherical and rodlike particles. In order to investigate the dynamics of multicomponent colloidal systems by DMC simulations, it is key to determine the elementary time step of each species and establish a unique timescale. This is crucial to consistently study the dynamics of colloidal particles with different geometry. By analyzing the mean-square displacement, the orientation autocorrelation functions, and the self part of the van Hove correlation functions, we show that DMC simulation is a very convenient and reliable technique to describe the stochastic dynamics of any multicomponent colloidal system. Our theoretical formalism can be easily extended to any colloidal system containing size and/or shape polydisperse particles.

Accelerator technology program. Status report, October 1984-March 1985

International Nuclear Information System (INIS)

Jameson, R.A.; Schriber, S.O.

1986-04-01

Activities of the racetrack-microtron development programs are highlighted, one of which is being done in collaboration with the National Bureau of Standards and the other with the University of Illinois; the BEAR (Beam Experiment Aboard Rocket) project; work in beam dynamics; the proposed LAMPF II accelerator; and the Proton Storage Ring. Discussed next is radio-frequency and microwave technology, followed by activities in accelerator theory and simulation, and free-electron laser technology. The report concludes with a listing of papers published during this reporting period

Design and simulation of a 1.2 MeV electron accelerator used for desulfuration and denitrogenation

International Nuclear Information System (INIS)

Zhou Jun; Zhu Dajun; Liu Shenggang

2005-01-01

This paper presents the structural design and functional analysis of a new kind of 1.2 MeV industrial electron accelerator. PIC (Particle-In-Cell) method is used to simulate this accelerator and to optimize the design, the results show that the optics property of this accelerator has been improved. This electron accelerator is used for desulfuration and denitrogenation in environmental industry. This application purifies flue gases of the thermal power station from Sulphurous oxide and Nitrogen oxide in order to reduce the pollution in the air. (author)

Modular simulation of reefer container dynamics

DEFF Research Database (Denmark)

Sørensen, Kresten Kjær; Nielsen, Jens Frederik Dalsgaard; Stoustrup, Jakob

2014-01-01

for faults enabling preventive maintenance. In this paper the feasibility of using different simulation methods is assessed with the goal of identifying a fast but accurate method that works well in a multi-rate environment. A modular multi-rate simulation environment for a dynamical system consisting...

Monte Carlo simulation of medical linear accelerator using primo code

International Nuclear Information System (INIS)

Omer, Mohamed Osman Mohamed Elhasan

2014-12-01

The use of monte Carlo simulation has become very important in the medical field and especially in calculation in radiotherapy. Various Monte Carlo codes were developed simulating interactions of particles and photons with matter. One of these codes is PRIMO that performs simulation of radiation transport from the primary electron source of a linac to estimate the absorbed dose in a water phantom or computerized tomography (CT). PRIMO is based on Penelope Monte Carlo code. Measurements of 6 MV photon beam PDD and profile were done for Elekta precise linear accelerator at Radiation and Isotopes Center Khartoum using computerized Blue water phantom and CC13 Ionization Chamber. accept Software was used to control the phantom to measure and verify dose distribution. Elektalinac from the list of available linacs in PRIMO was tuned to model Elekta precise linear accelerator. Beam parameter of 6.0 MeV initial electron energy, 0.20 MeV FWHM, and 0.20 cm focal spot FWHM were used, and an error of 4% between calculated and measured curves was found. The buildup region Z max was 1.40 cm and homogenous profile in cross line and in line were acquired. A number of studies were done to verily the model usability one of them is the effect of the number of histories on accuracy of the simulation and the resulted profile for the same beam parameters. The effect was noticeable and inaccuracies in the profile were reduced by increasing the number of histories. Another study was the effect of Side-step errors on the calculated dose which was compared with the measured dose for the same setting.It was in range of 2% for 5 cm shift, but it was higher in the calculated dose because of the small difference between the tuned model and measured dose curves. Future developments include simulating asymmetrical fields, calculating the dose distribution in computerized tomographic (CT) volume, studying the effect of beam modifiers on beam profile for both electron and photon beams.(Author)

GPU-accelerated depth map generation for X-ray simulations of complex CAD geometries

Science.gov (United States)

Grandin, Robert J.; Young, Gavin; Holland, Stephen D.; Krishnamurthy, Adarsh

2018-04-01

Interactive x-ray simulations of complex computer-aided design (CAD) models can provide valuable insights for better interpretation of the defect signatures such as porosity from x-ray CT images. Generating the depth map along a particular direction for the given CAD geometry is the most compute-intensive step in x-ray simulations. We have developed a GPU-accelerated method for real-time generation of depth maps of complex CAD geometries. We preprocess complex components designed using commercial CAD systems using a custom CAD module and convert them into a fine user-defined surface tessellation. Our CAD module can be used by different simulators as well as handle complex geometries, including those that arise from complex castings and composite structures. We then make use of a parallel algorithm that runs on a graphics processing unit (GPU) to convert the finely-tessellated CAD model to a voxelized representation. The voxelized representation can enable heterogeneous modeling of the volume enclosed by the CAD model by assigning heterogeneous material properties in specific regions. The depth maps are generated from this voxelized representation with the help of a GPU-accelerated ray-casting algorithm. The GPU-accelerated ray-casting method enables interactive (> 60 frames-per-second) generation of the depth maps of complex CAD geometries. This enables arbitrarily rotation and slicing of the CAD model, leading to better interpretation of the x-ray images by the user. In addition, the depth maps can be used to aid directly in CT reconstruction algorithms.

Lessons Learned From Dynamic Simulations of Advanced Fuel Cycles

International Nuclear Information System (INIS)

Piet, Steven J.; Dixon, Brent W.; Jacobson, Jacob J.; Matthern, Gretchen E.; Shropshire, David E.

2009-01-01

Years of performing dynamic simulations of advanced nuclear fuel cycle options provide insights into how they could work and how one might transition from the current once-through fuel cycle. This paper summarizes those insights from the context of the 2005 objectives and goals of the Advanced Fuel Cycle Initiative (AFCI). Our intent is not to compare options, assess options versus those objectives and goals, nor recommend changes to those objectives and goals. Rather, we organize what we have learned from dynamic simulations in the context of the AFCI objectives for waste management, proliferation resistance, uranium utilization, and economics. Thus, we do not merely describe 'lessons learned' from dynamic simulations but attempt to answer the 'so what' question by using this context. The analyses have been performed using the Verifiable Fuel Cycle Simulation of Nuclear Fuel Cycle Dynamics (VISION). We observe that the 2005 objectives and goals do not address many of the inherently dynamic discriminators among advanced fuel cycle options and transitions thereof

Numerical simulation of spin motion in circular accelerators using spinor formulation

International Nuclear Information System (INIS)

Nghiem, P.; Tkatchenko, A.

1992-07-01

A simple method is presented based on spinor algebra formalism for tracking the spin motion in circular accelerators. Using an analytical expression of the one-turn transformation matrix including the effects of perturbating fields or of siberian snakes, a simple and very fast numerical code has been written for studying spin motion in various circumstances. In particular, effects of synchrotron oscillations on final polarization after one isolated resonance crossing are simulated. Results of these calculations agree very well with those which have been obtained previously from analytical approaches or from other numerical-simulation programs. (author) 8 refs.; 14 figs

Linear Accelerators

International Nuclear Information System (INIS)

Vretenar, M

2014-01-01

The main features of radio-frequency linear accelerators are introduced, reviewing the different types of accelerating structures and presenting the main characteristics aspects of linac beam dynamics

Theory and simulation of ion acceleration with circularly polarized laser pulses; Theorie et simulation de l'acceleration des ions par impulsions laser a polarisation circulaire

Energy Technology Data Exchange (ETDEWEB)

Macchi, A. [CNR/INFM/polyLAB, Pisa (Italy); Macchi, A.; Tuveri, S.; Veghini, S. [Pisa Univ., Dept. of Physics E. Fermi (Italy); Liseikina, T.V. [Max Planck Institute for Nuclear Physics, Heidelberg (Germany)

2009-03-15

Ion acceleration driven by the radiation pressure of circularly polarized pulses is investigated via analytical modeling and particle-in-cell simulations. Both thick and thin targets, i.e. the 'hole boring' and 'light sail' regimes are considered. Parametric studies in one spatial dimension are used to determine the optimal thickness of thin targets and to address the effects of preformed plasma profiles and laser pulse ellipticity in thick targets. Three-dimensional (3D) simulations show that 'flat-top' radial profiles of the intensity are required to prevent early laser pulse breakthrough in thin targets. The 3D simulations are also used to address the issue of the conservation of the angular momentum of the laser pulse and its absorption in the plasma. (authors)

Dynamics of the relativistic acceleration of charged particles in space plasma while surfing the package electromagnetic waves

International Nuclear Information System (INIS)

Erokhin, N.S.; Zol'nikova, N.N.; Kuznetsov, E.A.; Mikhajlovskaya, L.A.

2010-01-01

Based on numerical calculations considered the relativistic acceleration of charged particles in space plasma when surfing on the spatially localized package of electromagnetic waves. The problem is reduced to the study of unsteady, nonlinear equation for the wave phase at the carrier frequency at the location of the accelerated charge, which is solved numerically. We study the temporal dynamics of the relativistic factor, the component of momentum and velocity of the particle, its trajectory is given gyro-rotation in an external magnetic field after the departure of the effective potential well. Dependence of the dynamics of a particle interacting with the wave of the sign of the velocity of the charge along the wave front. We formulate the optimal conditions of the relativistic particle acceleration wave packet, indicate the possibility of again (after a number gyro-turnover) charge trapping wave with an additional relativistic acceleration.

Monte Carlo simulation of the Varian Clinac 600C accelerator dynamic and physical wedges

Energy Technology Data Exchange (ETDEWEB)

Soares, S [Universidade da Beira Interior, Av. Marques d' Avila e Bolama, Covilha 6201-001 (Portugal); Chaves, A [Instituto Portugues de Oncologia Doutor Francisco Gentil (IPO), Av. Bissaya Barreto, Coimbra 3000-075 (Portugal); Peralta, L [Laboratorio de Instrumentacao e Fisica Experimental de PartIculas (LIP), Av. Elias Garcia no14 1o, Lisbon 1000-149 (Portugal); Lopes, Mc [Faculdade de Ciencias da Universidade de Lisboa, Campo Grande EdifIcio C5, Lisbon 1149-016 (Portugal)

2007-06-15

The present paper describes the study done on the dosimetric characteristics of the Varian Clinac 600C dynamic wedges (DW) and their comparison with the physical wedges (PW) in terms of the differences affecting the dose distributions, beam spectra, energy fluence and angular distributions. The geometry of the 4 MV photon beam and the dose distributions in a water phantom were simulated with GEANT3 and DPM Monte Carlo code systems. The DW was modelled through the constant movement of the upper jaws. The depth dose distributions and lateral profiles for the DW, PW and open fields were measured and compared with the Monte Carlo simulations and the global agreement was found to be within 3%. It was also found that the effects of a DW on beam spectral and angular distributions are much less significant than those produced by a PW. For example, in our study we found out that the 45{sup 0}PW, when compared with the corresponding open field, can introduce a 30% increase in the mean photon energy due to the beam hardening effect and that it can also introduce a 4.5% dose reduction in the build-up region because of the reduction of the contaminated electrons by the PW. For the DW neither this mean-energy increase nor such dose reduction was found. The PW, when compared to the DW, significantly alters the photon-beam spectrum and these dosimetric differences are significant and further investigation must be performed to quantify the impact in clinical use of these beams.

Computational plasticity algorithm for particle dynamics simulations

Science.gov (United States)

Krabbenhoft, K.; Lyamin, A. V.; Vignes, C.

2018-01-01

The problem of particle dynamics simulation is interpreted in the framework of computational plasticity leading to an algorithm which is mathematically indistinguishable from the common implicit scheme widely used in the finite element analysis of elastoplastic boundary value problems. This algorithm provides somewhat of a unification of two particle methods, the discrete element method and the contact dynamics method, which usually are thought of as being quite disparate. In particular, it is shown that the former appears as the special case where the time stepping is explicit while the use of implicit time stepping leads to the kind of schemes usually labelled contact dynamics methods. The framing of particle dynamics simulation within computational plasticity paves the way for new approaches similar (or identical) to those frequently employed in nonlinear finite element analysis. These include mixed implicit-explicit time stepping, dynamic relaxation and domain decomposition schemes.

Complex approach of beam dynamic investigation in SC LINAC

International Nuclear Information System (INIS)

Samoshin, A.V.

2012-01-01

Beam dynamic investigation is difficult for superconducting linac consisting from periodic sequences of independently phased accelerating cavities and focusing solenoids. The matrix calculation was preferably used for previous estimate of accelerating structure parameters. The matrix calculation does not allow properly investigate the longitudinal motion. The smooth approximation can be used to investigate the nonlinear ion beam dynamics in such accelerating structure and to calculate the longitudinal and transverse acceptances. The potential function and equation of motion in the Hamiltonian form are devised by the smooth approximation. The advantages and disadvantages of each method will describe, the results of investigation will compare. Application package for ion beam dynamic analysis will create. A numerical simulation of beam dynamics in the full field will carry out for the different variants of the accelerator structure based on analytically obtained results.

Accelerating cardiac bidomain simulations using graphics processing units.

Science.gov (United States)

Neic, A; Liebmann, M; Hoetzl, E; Mitchell, L; Vigmond, E J; Haase, G; Plank, G

2012-08-01

Anatomically realistic and biophysically detailed multiscale computer models of the heart are playing an increasingly important role in advancing our understanding of integrated cardiac function in health and disease. Such detailed simulations, however, are computationally vastly demanding, which is a limiting factor for a wider adoption of in-silico modeling. While current trends in high-performance computing (HPC) hardware promise to alleviate this problem, exploiting the potential of such architectures remains challenging since strongly scalable algorithms are necessitated to reduce execution times. Alternatively, acceleration technologies such as graphics processing units (GPUs) are being considered. While the potential of GPUs has been demonstrated in various applications, benefits in the context of bidomain simulations where large sparse linear systems have to be solved in parallel with advanced numerical techniques are less clear. In this study, the feasibility of multi-GPU bidomain simulations is demonstrated by running strong scalability benchmarks using a state-of-the-art model of rabbit ventricles. The model is spatially discretized using the finite element methods (FEM) on fully unstructured grids. The GPU code is directly derived from a large pre-existing code, the Cardiac Arrhythmia Research Package (CARP), with very minor perturbation of the code base. Overall, bidomain simulations were sped up by a factor of 11.8 to 16.3 in benchmarks running on 6-20 GPUs compared to the same number of CPU cores. To match the fastest GPU simulation which engaged 20 GPUs, 476 CPU cores were required on a national supercomputing facility.

Monte Carlo simulation of a clinical linear accelerator

International Nuclear Information System (INIS)

Lin, S.-Y.; Chu, T.-C.; Lin, J.-P.

2001-01-01

The effects of the physical parameters of an electron beam from a Siemens PRIMUS clinical linear accelerator (linac) on the dose distribution in water were investigated by Monte Carlo simulation. The EGS4 user code, OMEGA/BEAM, was used in this study. Various incident electron beams, for example, with different energies, spot sizes and distances from the point source, were simulated using the detailed linac head structure in the 6 MV photon mode. Approximately 10 million particles were collected in the scored plane, which was set under the reticle to form the so-called phase space file. The phase space file served as a source for simulating the dose distribution in water using DOSXYZ. Dose profiles at D max (1.5 cm) and PDD curves were calculated following simulating about 1 billion histories for dose profiles and 500 million histories for percent depth dose (PDD) curves in a 30x30x30 cm 3 water phantom. The simulation results were compared with the data measured by a CEA film and an ion chamber. The results show that the dose profiles are influenced by the energy and the spot size, while PDD curves are primarily influenced by the energy of the incident beam. The effect of the distance from the point source on the dose profile is not significant and is recommended to be set at infinity. We also recommend adjusting the beam energy by using PDD curves and, then, adjusting the spot size by using the dose profile to maintain the consistency of the Monte Carlo results and measured data

The electron accelerator for the AWAKE experiment at CERN

Energy Technology Data Exchange (ETDEWEB)

Pepitone, K., E-mail: kevin.pepitone@cern.ch [CERN, Geneva (Switzerland); Doebert, S., E-mail: steffen.doebert@cern.ch [CERN, Geneva (Switzerland); Burt, G. [The University of Lancaster, Lancaster (United Kingdom); Chevallay, E.; Chritin, N.; Delory, C.; Fedosseev, V.; Hessler, Ch.; McMonagle, G. [CERN, Geneva (Switzerland); Mete, O. [The University of Manchester, Manchester (United Kingdom); Verzilov, V. [Triumf, Vancouver (Canada); Apsimon, R. [The University of Lancaster, Lancaster (United Kingdom)

2016-09-01

The AWAKE collaboration prepares a proton driven plasma wakefield acceleration experiment using the SPS beam at CERN. A long proton bunch extracted from the SPS interacts with a high power laser and a 10 m long rubidium vapour plasma cell to create strong wakefields allowing sustained electron acceleration. The electron bunch to probe these wakefields is supplied by a 20 MeV electron accelerator. The electron accelerator consists of an RF-gun and a short booster structure. This electron source should provide beams with intensities between 0.1 and 1 nC, bunch lengths between 0.3 and 3 ps and an emittance of the order of 2 mm mrad. The wide range of parameters should cope with the uncertainties and future prospects of the planned experiments. The layout of the electron accelerator, its instrumentation and beam dynamics simulations are presented.

GPU accelerated manifold correction method for spinning compact binaries

Science.gov (United States)

Ran, Chong-xi; Liu, Song; Zhong, Shuang-ying

2018-04-01

The graphics processing unit (GPU) acceleration of the manifold correction algorithm based on the compute unified device architecture (CUDA) technology is designed to simulate the dynamic evolution of the Post-Newtonian (PN) Hamiltonian formulation of spinning compact binaries. The feasibility and the efficiency of parallel computation on GPU have been confirmed by various numerical experiments. The numerical comparisons show that the accuracy on GPU execution of manifold corrections method has a good agreement with the execution of codes on merely central processing unit (CPU-based) method. The acceleration ability when the codes are implemented on GPU can increase enormously through the use of shared memory and register optimization techniques without additional hardware costs, implying that the speedup is nearly 13 times as compared with the codes executed on CPU for phase space scan (including 314 × 314 orbits). In addition, GPU-accelerated manifold correction method is used to numerically study how dynamics are affected by the spin-induced quadrupole-monopole interaction for black hole binary system.

Accelerated Testing of Polymeric Composites Using the Dynamic Mechanical Analyzer

Science.gov (United States)

Abdel-Magid, Becky M.; Gates, Thomas S.

2000-01-01

Creep properties of IM7/K3B composite material were obtained using three accelerated test methods at elevated temperatures. Results of flexural creep tests using the dynamic mechanical analyzer (DMA) were compared with results of conventional tensile and compression creep tests. The procedures of the three test methods are described and the results are presented. Despite minor differences in the time shift factor of the creep compliance curves, the DMA results compared favorably with the results from the tensile and compressive creep tests. Some insight is given into establishing correlations between creep compliance in flexure and creep compliance in tension and compression. It is shown that with careful consideration of the limitations of flexure creep, a viable and reliable accelerated test procedure can be developed using the DMA to obtain the viscoelastic properties of composites in extreme environments.

Detailed spectral simulations in support of PBFA-Z dynamic hohlraum Z-pinch experiments

International Nuclear Information System (INIS)

MacFarlane, J.J.; Wang, P.; Derzon, M.S.; Haill, A.; Nash, T.J.; Peterson, D.L.

1997-01-01

In PBFA-Z dynamic hohlraum Z-pinch experiments, 16--18 MA of current is delivered to a load comprises of a tungsten wire array surrounding a low-density cylindrical CH foam. The magnetic field accelerates the W plasma radially inward at velocities ∼ 40--60 cm/micros. The W plasma impacts into the foam, generating a high T R radiation field which diffuses into the foam. The authors are investigating several types of spectral diagnostics which can be used to characterize the time-dependent conditions in the foam. In addition, they are examining the potential ramifications of axial jetting on the interpretation of axial x-ray diagnostics. In the analysis, results from 2-D radiation-magnetohydrodynamics simulations are post-processed using a hybrid spectral analysis code in which low-Z material is treated using a detailed collisional-radiative atomic model, while high-Z material is modeled using LTE UTA (unresolved transition array) opacities. They will present results from recent simulations and discuss ramifications for x-ray diagnostics

ELEGANT: A flexible SDDS-compliant code for accelerator simulation

International Nuclear Information System (INIS)

Borland, M.

2000-01-01

ELEGANT (ELEctron Generation ANd Tracking) is the principle accelerator simulation code used at the Advanced Photon Source (APS) for circular and one-pass machines. Capabilities include 6-D tracking using matrices up to third order, canonical integration, and numerical integration. Standard beamline elements are supported, as well as coherent synchrotron radiation, wakefields, rf elements, kickers, apertures, scattering, and more. In addition to tracking with and without errors, ELEGANT performs optimization of tracked properties, as well as computation and optimization of Twiss parameters, radiation integrals, matrices, and floor coordinates. Orbit/trajectory, tune, and chromaticity correction are supported. ELEGANT is fully compliant with the Self Describing Data Sets (SDDS) file protocol, and hence uses the SDDS Toolkit for pre- and post-processing. This permits users to prepare scripts to run the code in a flexible and automated fashion. It is particularly well suited to multistage simulation and concurrent simulation on many workstations. Several examples of complex projects performed with ELEGANT are given, including top-up safety analysis of the APS and design of the APS bunch compressor

Two-phase flow dynamics in a model steam generator under vertical acceleration oscillation field

International Nuclear Information System (INIS)

Ishida, T.; Teshima, N.; Sakurai, S.

1992-01-01

The influence of periodically varying acceleration on hydrodynamic response has been studied experimentally using an experimental rig which models a marine reactor subject to vertical motion. The effect on the primary loop is small, but the effect on the secondary loop is large. The variables of the secondary loop, such as circulation flow rate and water level, oscillate with acceleration. The variation of gains in frequency response is analysed. The variations of flow in the secondary loop and in the downcome water level, increase in proportion to the acceleration. The effect of the flow resistance in the secondary loop on the two-phase flow dynamics is clarified. (7 figures) (Author)

Accelerator Technology Program. Status report, October 1983-March 1984

International Nuclear Information System (INIS)

Jameson, R.A.

1985-01-01

This report covers major projects in the Accelerator Technology (AT) Division of the Los Alamos National Laboratory. The first sections highlight activities related to beam dynamics, inertial fusion, structure development, the racetrack microtron, and the CERN high-energy physics experiment NA-12. Discussed next is the Fusion Materials Irradiation Test Facility, followed by a summary of progress on the Proton Storage Ring and activities of the Theory and Simulation Group. The report concludes with a discussion of the H- accelerator program and a listing of papers published by AT-Division personnel during this reporting period

Molecular dynamics simulation of a phospholipid membrane

NARCIS (Netherlands)

Egberts, Egbert; Marrink, Siewert-Jan; Berendsen, Herman J.C.

We present the results of molecular dynamics (MD) simulations of a phospholipid membrane in water, including full atomic detail. The goal of the simulations was twofold: first we wanted to set up a simulation system which is able to reproduce experimental results and can serve as a model membrane in

Extended-Term Dynamic Simulations with High Penetrations of Photovoltaic Generation.

Energy Technology Data Exchange (ETDEWEB)

Concepcion, Ricky James [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Elliott, Ryan Thomas [Sandia National Lab. (SNL-NM), Albuquerque, NM (United States); Donnelly, Matt [Montana Tech., Butte, MT (United States); Sanchez-Gasca, Juan [GE Energy, Schenectady, NY (United States)

2016-01-01

The uncontrolled intermittent availability of renewable energy sources makes integration of such devices into today's grid a challenge. Thus, it is imperative that dynamic simulation tools used to analyze power system performance are able to support systems with high amounts of photovoltaic (PV) generation. Additionally, simulation durations expanding beyond minutes into hours must be supported. This report aims to identify the path forward for dynamic simulation tools to accom- modate these needs by characterizing the properties of power systems (with high PV penetration), analyzing how these properties affect dynamic simulation software, and offering solutions for po- tential problems. We present a study of fixed time step, explicit numerical integration schemes that may be more suitable for these goals, based on identified requirements for simulating high PV penetration systems. We also present the alternative of variable time step integration. To help determine the characteristics of systems with high PV generation, we performed small signal sta- bility studies and time domain simulations of two representative systems. Along with feedback from stakeholders and vendors, we identify the current gaps in power system modeling including fast and slow dynamics and propose a new simulation framework to improve our ability to model and simulate longer-term dynamics.

Probing Cellular Dynamics with Mesoscopic Simulations

DEFF Research Database (Denmark)

Shillcock, Julian C.

2010-01-01

Cellular processes span a huge range of length and time scales from the molecular to the near-macroscopic. Understanding how effects on one scale influence, and are themselves influenced by, those on lower and higher scales is a critical issue for the construction of models in Systems Biology....... Advances in computing hardware and software now allow explicit simulation of some aspects of cellular dynamics close to the molecular scale. Vesicle fusion is one example of such a process. Experiments, however, typically probe cellular behavior from the molecular scale up to microns. Standard particle...... soon be coupled to Mass Action models allowing the parameters in such models to be continuously tuned according to the finer resolution simulation. This will help realize the goal of a computational cellular simulation that is able to capture the dynamics of membrane-associated processes...

The GENGA code: gravitational encounters in N-body simulations with GPU acceleration

International Nuclear Information System (INIS)

Grimm, Simon L.; Stadel, Joachim G.

2014-01-01

We describe an open source GPU implementation of a hybrid symplectic N-body integrator, GENGA (Gravitational ENcounters with Gpu Acceleration), designed to integrate planet and planetesimal dynamics in the late stage of planet formation and stability analyses of planetary systems. GENGA uses a hybrid symplectic integrator to handle close encounters with very good energy conservation, which is essential in long-term planetary system integration. We extended the second-order hybrid integration scheme to higher orders. The GENGA code supports three simulation modes: integration of up to 2048 massive bodies, integration with up to a million test particles, or parallel integration of a large number of individual planetary systems. We compare the results of GENGA to Mercury and pkdgrav2 in terms of energy conservation and performance and find that the energy conservation of GENGA is comparable to Mercury and around two orders of magnitude better than pkdgrav2. GENGA runs up to 30 times faster than Mercury and up to 8 times faster than pkdgrav2. GENGA is written in CUDA C and runs on all NVIDIA GPUs with a computing capability of at least 2.0.

The GENGA code: gravitational encounters in N-body simulations with GPU acceleration

Energy Technology Data Exchange (ETDEWEB)

Grimm, Simon L.; Stadel, Joachim G., E-mail: sigrimm@physik.uzh.ch [Institute for Computational Science, University of Zürich, Winterthurerstrasse 190, CH-8057 Zürich (Switzerland)

2014-11-20

We describe an open source GPU implementation of a hybrid symplectic N-body integrator, GENGA (Gravitational ENcounters with Gpu Acceleration), designed to integrate planet and planetesimal dynamics in the late stage of planet formation and stability analyses of planetary systems. GENGA uses a hybrid symplectic integrator to handle close encounters with very good energy conservation, which is essential in long-term planetary system integration. We extended the second-order hybrid integration scheme to higher orders. The GENGA code supports three simulation modes: integration of up to 2048 massive bodies, integration with up to a million test particles, or parallel integration of a large number of individual planetary systems. We compare the results of GENGA to Mercury and pkdgrav2 in terms of energy conservation and performance and find that the energy conservation of GENGA is comparable to Mercury and around two orders of magnitude better than pkdgrav2. GENGA runs up to 30 times faster than Mercury and up to 8 times faster than pkdgrav2. GENGA is written in CUDA C and runs on all NVIDIA GPUs with a computing capability of at least 2.0.

A eural etwork Model for Dynamics Simulation

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