WorldWideScience

Sample records for absorption line profiles

  1. Effect of a progressive sound wave on the profiles of spectral lines. 2: Asymmetry of faint Fraunhofer lines. [absorption spectra

    Science.gov (United States)

    Kostyk, R. I.

    1974-01-01

    The absorption coefficient profile was calculated for lines of different chemical elements in a medium with progressive sound waves. Calculations show that (1) the degree and direction of asymmetry depend on the atomic ionization potential and the potential of lower level excitation of the individual line; (2) the degree of asymmetry of a line decreases from the center toward the limb of the solar disc; and (3) turbulent motions 'suppress' the asymmetry.

  2. Integrative fitting of absorption line profiles with high accuracy, robustness, and speed

    Science.gov (United States)

    Skrotzki, Julian; Habig, Jan Christoph; Ebert, Volker

    2014-08-01

    The principle of the integrative evaluation of absorption line profiles relies on the numeric integration of absorption line signals to retrieve absorber concentrations, e.g., of trace gases. Thus, it is a fast and robust technique. However, previous implementations of the integrative evaluation principle showed shortcomings in terms of accuracy and the lack of a fit quality indicator. This has motivated the development of an advanced integrative (AI) fitting algorithm. The AI fitting algorithm retains the advantages of previous integrative implementations—robustness and speed—and is able to achieve high accuracy by introduction of a novel iterative fitting process. A comparison of the AI fitting algorithm with the widely used Levenberg-Marquardt (LM) fitting algorithm indicates that the AI algorithm has advantages in terms of robustness due to its independence from appropriately chosen start values for the initialization of the fitting process. In addition, the AI fitting algorithm shows speed advantages typically resulting in a factor of three to four shorter computational times on a standard personal computer. The LM algorithm on the other hand retains advantages in terms of a much higher flexibility, as the AI fitting algorithm is restricted to the evaluation of single absorption lines with precomputed line width. Comparing both fitting algorithms for the specific application of in situ laser hygrometry at 1,370 nm using direct tunable diode laser absorption spectroscopy (TDLAS) suggests that the accuracy of the AI algorithm is equivalent to that of the LM algorithm. For example, a signal-to-noise ratio of 80 and better typically yields a deviation of cloud chamber aerosol interactions and dynamics in the atmosphere (AIDA)—a unique large-scale facility to study atmospheric processes. The robustness of the AI fitting algorithm has been validated for typical AIDA conditions encompassing strong transmission fluctuations during the formation of droplet or ice

  3. Anomalies in resonant absorption line profiles of atoms with large hyperfine splitting

    International Nuclear Information System (INIS)

    Parkhomenko, A.I.; Pod'yachev, S.P.; Privalov, T.I.; Shalagin, A.M.

    1997-01-01

    We examine a monochromatic absorption line in the velocity-nonselective excitation of atoms when the components of the hyperfine stricture of the electronic ground states are optically pumped. We show that the absorption lines possess unusual substructures for some values of the hyperfine splitting of the ground state (which exceed the Doppler absorption linewidth severalfold). These substructures in the absorption spectrum are most apparent if the hyperfine structure of the excited electronic state is taken into account. We calculate the absorption spectra of monochromatic light near the D 1 and D 2 lines of atomic rubidium 85,87 Rb. With real hyperfine splitting taken into account, the D 1 and D 2 lines are modeled by 4- and 6-level diagrams, respectively. Finally, we show that atomic rubidium vapor can be successfully used to observe the spectral features experimentally

  4. Absorption line profiles in a moving atmosphere - A single scattering linear perturbation theory

    Science.gov (United States)

    Hays, P. B.; Abreu, V. J.

    1989-01-01

    An integral equation is derived which linearly relates Doppler perturbations in the spectrum of atmospheric absorption features to the wind system which creates them. The perturbation theory is developed using a single scattering model, which is validated against a multiple scattering calculation. The nature and basic properties of the kernels in the integral equation are examined. It is concluded that the kernels are well behaved and that wind velocity profiles can be recovered using standard inversion techniques.

  5. a High Resolution Spectroscopic Study of Absorption Line Profiles in the A-Band of Molecular Oxygen

    Science.gov (United States)

    Ritter, Kenneth James

    A study has been made of absorption line profiles in the A-band of molecular oxygen at 13120 cm('-1). High resolution spectra were obtained using a narrow linewidth tunable dye laser in conjunction with a multi-pass optical absorption cell, a photo-acoustic cell, and a variable temperature photo-acoustic cell. Line parameters were determined using a least-squares fitting routine which numerically adjusted parameters of certain standard line profile functions to obtain the best fit with the observed profiles. The standard line profiles used were the Voigt function, two Dicke-narrowed profiles, and a speed dependent Voigt profile. Clear deviations are shown between the observed and simple Voigt profiles, while the other three profiles were found to fit the observed profiles well. Line strengths, pressure broadening coefficients, and pressure induced frequency shifts were also determined from the measured profiles. Line strengths obtained from the absorption measurements are compared with expressions given by Childs and Mecke (1931), Schlapp (1932;1937), Tilford et al. (1965) and Watson (1968). The expressions of Tilford et al. (1965) and Watson (1968) are shown to be in closest agreement with the measurements. Self-broadening coefficients are compared with previous measurements made by other investigators as well as with theoretical calculations made using the semi-classical method of Smith and Giraud (1979). Pressure induced frequency shifts were determined by taking simultaneous spectra of two cells at different pressures. The pressure induced frequency shifts and broadening coefficients were measured in pure oxygen as a function of temperature ( -20(DEGREES)C to 100(DEGREES)C), as well as in air and the broadeners He, Ne, Ar, Kr, and Xe at ambient temperature. The measured gas broadening coefficients are shown to be in close agreement with values calculated using the method of Smith and Giraud (1979). It is also shown that the general behavior observed for the

  6. Atmospheric profiling via satellite to satellite occultations near water and ozone absorption lines for weather and climate

    Science.gov (United States)

    Kursinski, E. R.; Ward, D.; Otarola, A. C.; McGhee, J.; Stovern, M.; Sammler, K.; Reed, H.; Erickson, D.; McCormick, C.; Griggs, E.

    2016-05-01

    Significantly reducing weather and climate prediction uncertainty requires global observations with substantially higher information content than present observations provide. While GPS occultations have provided a major advance, GPS observations of the atmosphere are limited by wavelengths chosen specifically to minimize interaction with the atmosphere. Significantly more information can be obtained via satellite to satellite occultations made at wavelengths chosen specifically to characterize the atmosphere. Here we describe such a system that will probe cm- and mmwavelength water vapor absorption lines called the Active Temperature, Ozone and Moisture Microwave Spectrometer (ATOMMS). Profiling both the speed and absorption of light enables ATOMMS to profile temperature, pressure and humidity simultaneously, which GPS occultations cannot do, as well as profile clouds and turbulence. We summarize the ATOMMS concept and its theoretical performance. We describe field measurements made with a prototype ATOMMS instrument and several important capabilities demonstrated with those ground based measurements including retrieving temporal variations in path-averaged water vapor to 1%, in clear, cloudy and rainy conditions, up to optical depths of 17, remotely sensing turbulence and determining rain rates. We conclude with a vision of a future ATOMMS low Earth orbiting satellite constellation designed to take advantage of synergies between observational needs for weather and climate, ATOMMS unprecedented orbital remote sensing capabilities and recent cubesat technological innovations that enable a constellation of dozens of very small spacecraft to achieve many critical, but as yet unfulfilled, monitoring and forecasting needs.

  7. Monte Carlo simulations of the detailed iron absorption line profiles from thermal winds in X-ray binaries

    Science.gov (United States)

    Tomaru, Ryota; Done, Chris; Odaka, Hirokazu; Watanabe, Shin; Takahashi, Tadayuki

    2018-05-01

    Blueshifted absorption lines from highly ionized iron are seen in some high inclination X-ray binary systems, indicating the presence of an equatorial disc wind. This launch mechanism is under debate, but thermal driving should be ubiquitous. X-ray irradiation from the central source heats disc surface, forming a wind from the outer disc where the local escape velocity is lower than the sound speed. The mass-loss rate from each part of the disc is determined by the luminosity and spectral shape of the central source. We use these together with an assumed density and velocity structure of the wind to predict the column density and ionization state, then combine this with a Monte Carlo radiation transfer to predict the detailed shape of the absorption (and emission) line profiles. We test this on the persistent wind seen in the bright neutron star binary GX 13+1, with luminosity L/LEdd ˜ 0.5. We approximately include the effect of radiation pressure because of high luminosity, and compute line features. We compare these to the highest resolution data, the Chandra third-order grating spectra, which we show here for the first time. This is the first physical model for the wind in this system, and it succeeds in reproducing many of the features seen in the data, showing that the wind in GX13+1 is most likely a thermal-radiation driven wind. This approach, combined with better streamline structures derived from full radiation hydrodynamic simulations, will allow future calorimeter data to explore the detail wind structure.

  8. Monte-Carlo simulations of the detailed iron absorption line profiles from thermal winds in X-ray binaries

    Science.gov (United States)

    Tomaru, Ryota; Done, Chris; Odaka, Hirokazu; Watanabe, Shin; Takahashi, Tadayuki

    2018-02-01

    Blue-shifted absorption lines from highly ionised iron are seen in some high inclination X-ray binary systems, indicating the presence of an equatorial disc wind. This launch mechanism is under debate, but thermal driving should be ubiquitous. X-ray irradiation from the central source heats disc surface, forming a wind from the outer disc where the local escape velocity is lower than the sound speed. The mass loss rate from each part of the disc is determined by the luminosity and spectral shape of the central source. We use these together with an assumed density and velocity structure of the wind to predict the column density and ionisation state, then combine this with a Monte-Carlo radiation transfer to predict the detailed shape of the absorption (and emission) line profiles. We test this on the persistent wind seen in the bright neutron star binary GX 13+1, with luminosity L/LEdd ˜ 0.5. We approximately include the effect of radiation pressure because of high luminosity, and compute line features. We compare these to the highest resolution data, the Chandra third order grating spectra, which we show here for the first time. This is the first physical model for the wind in this system, and it succeeds in reproducing many of the features seen in the data, showing that the wind in GX13+1 is most likely a thermal-radiation driven wind. This approach, combined with better streamline structures derived from full radiation hydrodynamic simulations, will allow future calorimeter data to explore the detail wind structure.

  9. Infrared heterodyne spectroscopy of astronomical and laboratory sources at 8.5 micron. [absorption line profiles of nitrogen oxide and black body emission from Moon and Mars

    Science.gov (United States)

    Mumma, M.; Kostiuk, T.; Cohen, S.; Buhl, D.; Vonthuna, P. C.

    1974-01-01

    The first infrared heterodyne spectrometer using tuneable semiconductor (PbSe) diode lasers has been constructed and was used near 8.5 micron to measure absorption line profiles of N2O in the laboratory and black body emission from the Moon and from Mars. Spectral information was recorded over a 200 MHz bandwidth using an 8-channel filter bank. The resolution was 25 MHz and the minimum detectable (black body) power was 1 x 10 to the minus 16th power watts for 8 minutes of integration. The results demonstrate the usefulness of heterodyne spectroscopy for the study of remote and local sources in the infrared.

  10. SPECTRO-POLARIMETRIC SIMULATIONS OF THE SOLAR LIMB: ABSORPTION-EMISSION Fe I 6301.5 Å AND 6302.5 Å LINE PROFILES AND TORSIONAL FLOWS IN THE INTERGRANULAR MAGNETIC FLUX CONCENTRATIONS

    Energy Technology Data Exchange (ETDEWEB)

    Shelyag, S. [School of Mathematical Sciences, Monash University, Clayton, Victoria 3800 (Australia)

    2015-03-01

    Using radiative magnetohydrodynamic simulations of the magnetized solar photosphere and detailed spectro-polarimetric diagnostics with the Fe I 6301.5 Å and 6302.5 Å photospheric lines in the local thermodynamic equilibrium approximation, we model active solar granulation as if it was observed at the solar limb. We analyze general properties of the radiation across the solar limb, such as the continuum and the line core limb darkening and the granulation contrast. We demonstrate the presence of profiles with both emission and absorption features at the simulated solar limb, and pure emission profiles above the limb. These profiles are associated with the regions of strong linear polarization of the emergent radiation, indicating the influence of the intergranular magnetic fields on the line formation. We analyze physical origins of the emission wings in the Stokes profiles at the limb, and demonstrate that these features are produced by localized heating and torsional motions in the intergranular magnetic flux concentrations.

  11. Absorption line spectroscopy of the interstellar medium

    International Nuclear Information System (INIS)

    Jura, M.

    1983-01-01

    Absorption line studies of the interstellar medium are described. The discussion is in three parts. The first describes current views of diffuse interstellar clouds, while the second reports the results of recent extensive surveys of interstellar regions. The final part is an outline of possible future observations. (orig.)

  12. Narrow absorption lines complex I: one form of broad absorption line

    Science.gov (United States)

    Lu, Wei-Jian; Lin, Ying-Ru

    2018-03-01

    We discover that some of the broad absorption lines (BALs) are actually a complex of narrow absorption lines (NALs). As a pilot study of this type of BAL, we show this discovery through a typical example in this paper. Utilizing the two-epoch observations of J002710.06-094435.3 (hereafter J0027-0944) from the Sloan Digital Sky Survey (SDSS), we find that each of the C IV and Si IV BAL troughs contains at least four NAL doublets. By resolving the Si IV BAL into multiple NALs, we present the following main results and conclusions. First, all these NALs show coordinated variations between the two-epoch SDSS observations, suggesting that they all originate in the quasar outflow, and that their variations are due to global changes in the ionization condition of the absorbing gas. Secondly, a BAL consisting of a number of NAL components indicates that this type of BAL is basically the same as the intrinsic NAL, which tends to support the inclination model rather than the evolution model. Thirdly, although both the C IV and Si IV BALs originate from the same clumpy substructures of the outflow, they show different profile shapes: multiple absorption troughs for the Si IV BAL in a wider velocity range, while P-Cygni for the C IV BAL in a narrower velocity range. This can be interpreted by the substantial differences in fine structure and oscillator strength between the Si IVλλ1393, 1402 and C IVλλ1548, 1551 doublets. Based on the above conclusions, we consider that the decomposition of a BAL into NALs can serve as a way to resolve the clumpy structure for outflows, and it can be used to learn more about characteristics of the clumpy structure and to test the outflow model, when utilizing high-resolution spectra and photoionization model.

  13. Spectrophotometry of six broad absorption line QSOs

    Science.gov (United States)

    Junkkarinen, Vesa T.; Burbidge, E. Margaret; Smith, Harding E.

    1987-01-01

    Spectrophotometric observations of six broad absorption-line QSOs (BALQSOs) are presented. The continua and emission lines are compared with those in the spectra of QSOs without BALs. A statistically significant difference is found in the emission-line intensity ratio for (N V 1240-A)/(C IV 1549-A). The median value of (N V)/(C IV) for the BALQSOs is two to three times the median for QSOs without BALs. The absorption features of the BALQSOs are described, and the column densities and limits on the ionization structure of the BAL region are discussed. If the dominant ionization mechanism is photoionization, then it is likely that either the ionizing spectrum is steep or the abundances are considerably different from solar. Collisional ionization may be a significant factor, but it cannot totally dominate the ionization rate.

  14. Absorption lines, Faraday rotation, and magnetic field estimates for QSO absorption-line clouds

    International Nuclear Information System (INIS)

    Kronberg, P.P.; Perry, J.J.

    1982-01-01

    We have estimated the extragalactic component of Faraday rotation for a sample of 37 QSOs for which there is good absorption line data, which we have also analyzed. Statistical evidence is presented which suggests that we have isolated a component of Faraday rotation which is occurring in the absorption clouds of some QSOs

  15. Identification of Metal Absorption Lines on Quasar Spectra of SDSS ...

    Indian Academy of Sciences (India)

    Key words. Line: identification—quasars: absorption lines—quasars: general. 1. Motivation. Absorption lines are often observed on the quasar spectrum. The intrinsic absorption lines of quasars are often thought to originate in the ionized gas that are physically related with the corresponding quasars, while the intervening ...

  16. Monitoring the variability of intrinsic absorption lines in quasar spectra , ,

    Energy Technology Data Exchange (ETDEWEB)

    Misawa, Toru [School of General Education, Shinshu University, 3-1-1 Asahi, Matsumoto, Nagano 390-8621 (Japan); Charlton, Jane C.; Eracleous, Michael, E-mail: misawatr@shinshu-u.ac.jp [Department of Astronomy and Astrophysics, The Pennsylvania State University, University Park, PA 16802 (United States)

    2014-09-01

    We have monitored 12 intrinsic narrow absorption lines (NALs) in five quasars and seven mini-broad absorption lines (mini-BALs) in six quasars for a period of 4-12 yr (1-3.5 yr in the quasar rest-frame). We present the observational data and the conclusions that follow immediately from them, as a prelude to a more detailed analysis. We found clear variability in the equivalent widths (EWs) of the mini-BAL systems but no easily discernible changes in their profiles. We did not detect any variability in the NAL systems or in narrow components that are often located at the center of mini-BAL profiles. Variations in mini-BAL EWs are larger at longer time intervals, reminiscent of the trend seen in variable BALs. If we assume that the observed variations result from changes in the ionization state of the mini-BAL gas, we infer lower limits to the gas density ∼10{sup 3}-10{sup 5} cm{sup –3} and upper limits on the distance of the absorbers from the central engine of the order of a few kiloparsecs. Motivated by the observed variability properties, we suggest that mini-BALs can vary because of fluctuations of the ionizing continuum or changes in partial coverage while NALs can vary primarily because of changes in partial coverage.

  17. Interferometric measurement of lines shift in flames in connection with interpretation of lined absorption method in atomic absorption spectroscopy

    International Nuclear Information System (INIS)

    L'vov, B.V.; Polzik, L.K.; Katskov, D.A.; Kruglikova, L.P.

    1975-01-01

    This paper is concerned with interferometric measuring of the line shift in flames in the view of interpretation of absorption lines in the atomic absorption spectroscopy. The newly measured line shifts were compared to the known data on Lorentz broadening of the same lines obtained by methods free of the systematic errors. The resonant lines of the alkaline earth elements (Sr, Ca, Ba) were investigated. To reduce self-absorption in the flame the solutions with minimum concentrations of the elements were used. The computation scheme includes the spectrometer apparatus width and line broadening due to the self-absorption. Formulae are given for computing the values studied. Good agreement was observed between the computed and experimental results. Error analysis was performed. It was concluded that any line shifts in the hydrocarbons were correctly taken into an account in the absolute computations of absorption

  18. Atmospheric pressure and temperature profiling using near IR differential absorption lidar

    Science.gov (United States)

    Korb, C. L.; Schwemmer, G. K.; Dombrowski, M.; Weng, C. Y.

    1983-01-01

    The present investigation is concerned with differential absorption lidar techniques for remotely measuring the atmospheric temperature and pressure profile, surface pressure, and cloud top pressure-height. The procedure used in determining the pressure is based on the conduction of high-resolution measurements of absorption in the wings of lines in the oxygen A band. Absorption with respect to these areas is highly pressure sensitive in connection with the mechanism of collisional line broadening. The method of temperature measurement utilizes a determination of the absorption at the center of a selected line in the oxygen A band which originates from a quantum state with high ground state energy.

  19. Identification of Metal Absorption Lines on Quasar Spectra of SDSS ...

    Indian Academy of Sciences (India)

    . Baise 533000, China. 2Guangdong University of Technology, Guangzhou 510006, China. 3Centre for Astrophysics, Guangzhou University, Guangzhou 510006, China. ∗ e-mail: cysu@gdut.edu.cn. Abstract. Absorption lines are an important ...

  20. Extent and structure of intervening absorbers from absorption lines redshifted on quasar emission lines

    Science.gov (United States)

    Bergeron, J.; Boissé, P.

    2017-07-01

    Aims: We wish to study the extent and sub-parsec spatial structure of intervening quasar absorbers, mainly those involving cold neutral and molecular gas. Methods: We have selected quasar absorption systems with high spectral resolution and a good signal-to-noise ratio data, with some of their lines falling on quasar emission features. By investigating the consistency of absorption profiles seen for lines formed either against the quasar continuum source or on the much more extended (Lyα-N v, C iv or Lyβ-O vi) emission line region (ELR), we can probe the extent and structure of the foreground absorber over the extent of the ELR ( 0.3-1 pc). The spatial covering analysis provides constraints on the transverse size of the absorber and thus is complementary to variability or photoionisation modelling studies, which yield information on the absorber size along the line of sight. The methods we used to identify spatial covering or structure effects involve line profile fitting and curve-of-growth analysis. Results: We have detected three absorbers with unambiguous non-uniformity effects in neutral gas. For the extreme case of the Fe I absorber at zabs = 0.45206 towards HE 0001-2340, we derive a coverage factor of the ELR of at most 0.10 and possibly very close to zero; this implies an overall absorber size no larger than 0.06 pc. For the zabs = 2.41837 C I absorber towards QSO J1439+1117, absorption is significantly stronger towards the ELR than towards the continuum source in several C I and C I⋆ velocity components, pointing to spatial variations of their column densities of about a factor of two and to structures at the 100 au-0.1 pc scale. The other systems with firm or possible effects can be described in terms of a partial covering of the ELR, with coverage factors in the range 0.7-1. The overall results for cold neutral absorbers imply a transverse extent of about five times the ELR size or smaller, which is consistent with other known constraints. Although

  1. Searching for Variability of NV Intrinsic Narrow Absorption Line Systems

    Science.gov (United States)

    Rodruck, Michael; Charlton, Jane; Ganguly, Rajib

    2018-01-01

    The majority of quasar absorption line systems with NV detected are found within the associated region (within 5000 km/s of the quasar redshift) and many/most are believed to be related to the quasar accretion disk wind or outflows. The most definite evidence that these NV absorbers are "intrinsic" is partial covering of the quasar continuum source and/or broad line region. Over 75 quasars containing NV narrow absorption lines have observations obtained at different times with the Keck/HIRES and the VLT/UVES spectrographs at high resolution. The interval between these observations range from months to a decade in the quasar rest frame. While variability is common for intrinsic broad and mini-broad absorption lines, intrinsic narrow absorption lines have been found to be less likely to vary, though systematic studies with large, high quality datasets have been limited. The variability timescales are useful for deriving gas densities and thus the distances from the central engines. This is important in mapping the quasar surroundings, understanding the accretion disk wind mechanism, and assessing the effect the wind has on the galaxy surroundings. We report on the results of a systematic study of variability of NV NALs, exploiting the overlap of targets for observations in the archives of Keck and VLT, and discuss the consequences for interpretation of the origin of intrinsic narrow absorption lines.

  2. The XMM-Newton Iron Line Profile of NGC 3783

    Science.gov (United States)

    Reeves, J. N.; Nandra, K.; George, I. M.; Pounds, K. A.; Turner, T. J.; Yaqoob, T.

    2003-01-01

    We report on observations of the iron K line in the nearby Seyfert 1 galaxy, NGC 3783, obtained in a long, 2 orbit (approx. 240 ks) XMM-Newton observation. The line profile obtained exhibits two strong narrow peaks at 6.4 keV and at 7.0 keV, with measured line equivalent widths of 120 and 35 eV respectively. The 6.4 keV emission is the K(alpha) line from near neutral Fe, whilst the 7.0 keV feature probably originates from a blend of the neutral Fe K(beta) line and the Hydrogen-like line of Fe at 6.97 keV. The relatively narrow velocity width of the K(alpha) line (approx. less than 5000 km/s), its lack of response to the continuum emission on short timescales and the detection of a neutral Compton reflection component are all consistent with a distant origin in Compton-thick matter such as the putative molecular torus. A strong absorption line from highly ionized iron (at 6.67 keV) is detected in the time-averaged iron line profile, whilst the depth of the feature appears to vary with time, being strongest when the continuum flux is higher. The iron absorption line probably arises from the highest ionization component of the known warm absorber in NGC 3783, with an ionization of log xi approx 3 and column density of N(sub H) approx. 5 x 10(exp 22)/sq cm and may originate from within 0.1 pc of the nucleus. A weak red-wing to the iron K line profile is also detected below 6.4 keV. However when the effect of the highly ionized warm absorber on the underlying continuum is taken into account, the requirement for a relativistic iron line component from the inner disk is reduced.

  3. New Constraints on Quasar Broad Absorption and Emission Line Regions from Gravitational Microlensing

    Energy Technology Data Exchange (ETDEWEB)

    Hutsemékers, Damien; Braibant, Lorraine; Sluse, Dominique [Institut d' Astrophysique et de Géophysique, Université de Liège, Liège (Belgium); Anguita, Timo [Departamento de Ciencias Fisicas, Universidad Andres Bello, Santiago (Chile); Goosmann, René, E-mail: hutsemekers@astro.ulg.ac.be [Observatoire Astronomique de Strasbourg, Université de Strasbourg, Strasbourg (France)

    2017-09-29

    Gravitational microlensing is a powerful tool allowing one to probe the structure of quasars on sub-parsec scale. We report recent results, focusing on the broad absorption and emission line regions. In particular microlensing reveals the intrinsic absorption hidden in the P Cygni-type line profiles observed in the broad absorption line quasar H1413+117, as well as the existence of an extended continuum source. In addition, polarization microlensing provides constraints on the scattering region. In the quasar Q2237+030, microlensing differently distorts the Hα and CIV broad emission line profiles, indicating that the low- and high-ionization broad emission lines must originate from regions with distinct kinematical properties. We also present simulations of the effect of microlensing on line profiles considering simple but representative models of the broad emission line region. Comparison of observations to simulations allows us to conclude that the Hα emitting region in Q2237+030 is best represented by a Keplerian disk.

  4. Error analysis for mesospheric temperature profiling by absorptive occultation sensors

    Directory of Open Access Journals (Sweden)

    M. J. Rieder

    Full Text Available An error analysis for mesospheric profiles retrieved from absorptive occultation data has been performed, starting with realistic error assumptions as would apply to intensity data collected by available high-precision UV photodiode sensors. Propagation of statistical errors was investigated through the complete retrieval chain from measured intensity profiles to atmospheric density, pressure, and temperature profiles. We assumed unbiased errors as the occultation method is essentially self-calibrating and straight-line propagation of occulted signals as we focus on heights of 50–100 km, where refractive bending of the sensed radiation is negligible. Throughout the analysis the errors were characterized at each retrieval step by their mean profile, their covariance matrix and their probability density function (pdf. This furnishes, compared to a variance-only estimation, a much improved insight into the error propagation mechanism. We applied the procedure to a baseline analysis of the performance of a recently proposed solar UV occultation sensor (SMAS – Sun Monitor and Atmospheric Sounder and provide, using a reasonable exponential atmospheric model as background, results on error standard deviations and error correlation functions of density, pressure, and temperature profiles. Two different sensor photodiode assumptions are discussed, respectively, diamond diodes (DD with 0.03% and silicon diodes (SD with 0.1% (unattenuated intensity measurement noise at 10 Hz sampling rate. A factor-of-2 margin was applied to these noise values in order to roughly account for unmodeled cross section uncertainties. Within the entire height domain (50–100 km we find temperature to be retrieved to better than 0.3 K (DD / 1 K (SD accuracy, respectively, at 2 km height resolution. The results indicate that absorptive occultations acquired by a SMAS-type sensor could provide mesospheric profiles of fundamental variables such as temperature with

  5. Broad Absorption Line Quasar catalogues with Supervised Neural Networks

    International Nuclear Information System (INIS)

    Scaringi, Simone; Knigge, Christian; Cottis, Christopher E.; Goad, Michael R.

    2008-01-01

    We have applied a Learning Vector Quantization (LVQ) algorithm to SDSS DR5 quasar spectra in order to create a large catalogue of broad absorption line quasars (BALQSOs). We first discuss the problems with BALQSO catalogues constructed using the conventional balnicity and/or absorption indices (BI and AI), and then describe the supervised LVQ network we have trained to recognise BALQSOs. The resulting BALQSO catalogue should be substantially more robust and complete than BI-or AI-based ones.

  6. The low-ion QSO absorption-line systems

    International Nuclear Information System (INIS)

    Lanzetta, K.M.

    1988-01-01

    Various techniques are used to investigate the class of QSO absorption-line systems that exhibit low-ion absorption lines. Four separate investigations are conducted as follows: Spectroscopy of 32 QSOs at red wavelengths is presented and used to investigate intermediate-redshift MgII absorption. A total of 22 Mg II doublets are detected, from which properties of the Mg II absorbers are derived. Marginal evidence for intrinsic evolution of the number density of the Mg II absorbers with redshift is found. The data are combined with previous observations of C IV and C II seen in the same QSOs at blue wavelengths, and the properties of Mg II- and C IV-selected systems are compared. A sample is constructed of 129 QSOs for which are available published data suitable for detecting absorption-line systems that are optically thick to Lyman continuum radiation. A total of 53 such Lyman-limit systems are found, from which properties of the Lyman-limit systems are derived. It is found that the rate of incidence of the systems does not strongly evolved with redshift. This result is contrasted with the evolution found previously for systems selected on the basis of Mg II absorption. Spectroscopy at red wavelengths of eight QSOs with known damped Lyα absorption systems is presented. Spectroscopic and spectrophotometric observations aimed at detecting molecular hydrogen and dust in the z = 2.796 damped Lyα absorber toward Q1337 + 113 are presented

  7. The Sloan Digital Sky Survey QSO absorption line catalogue

    Science.gov (United States)

    York, Donald G.; vanden Berk, Daniel; Richards, Gordon T.; Crotts, Arlin P. S.; Khare, Pushpa; Lauroesch, James; Lemoine, Martin; Burles, Scott; Bernardi, Mariangela; Castander, Francisco J.; Frieman, Josh; Loveday, Jon; Meiksin, Avery; Nichol, Robert; Schlegel, David; Schneider, Donald P.; Subbarao, Mark; Stoughton, Chris; Szalay, Alex; Yanny, Brian; Alsayyad, Yusra; Kumar, Abhishek; Lundgren, Britt; Shanidze, Natela; Vanlandingham, Johnny; Wood, Matthew; Baugher, Britt; Brinkmann, Jon; Brunner, Robert; Fukugita, Masaaka; Hall, Patrick B.; Heckman, Timothy M.; Hobbs, Lewis M.; Hogan, Craig J.; Hui, Lam; Jenkins, Edward B.; Kunstz, Daniel; Menard, Brice; Nakamura, Osamu; Quashnock, Jean M.; Stein, Michael; Thakar, Aniruddha R.; Turnshek, David; Welty, Daniel E.; SDSS Collaboration

    2005-03-01

    The spectra of the Sloan Digital Sky Survey (SDSS) are being used to construct a catalogue of QSO absorption lines, for use in studies of abundances, relevant radiation fields, number counts as a function of redshift, and other matters, including the evolution of these parameters. The catalogue includes intervening, associated, and BAL absorbers, in order to allow a clearer definition of the relationships between these three classes. We describe the motivation for and the data products of the project to build the SDSS QSO absorption line catalogue.

  8. Extreme Variability in a Broad Absorption Line Quasar

    Energy Technology Data Exchange (ETDEWEB)

    Stern, Daniel; Jun, Hyunsung D. [Jet Propulsion Laboratory, California Institute of Technology, 4800 Oak Grove Drive, Mail Stop 169-221, Pasadena, CA 91109 (United States); Graham, Matthew J.; Djorgovski, S. G.; Donalek, Ciro; Drake, Andrew J.; Mahabal, Ashish A.; Steidel, Charles C. [California Institute of Technology, 1200 E. California Boulevard, Pasadena, CA 91125 (United States); Arav, Nahum; Chamberlain, Carter [Department of Physics, Virginia Tech, Blacksburg, VA 24061 (United States); Barth, Aaron J. [Department of Physics and Astronomy, 4129 Frederick Reines Hall, University of California, Irvine, CA 92697 (United States); Glikman, Eilat, E-mail: daniel.k.stern@jpl.nasa.gov [Department of Physics, Middlebury College, Middlebury, VT 05753 (United States)

    2017-04-20

    CRTS J084133.15+200525.8 is an optically bright quasar at z = 2.345 that has shown extreme spectral variability over the past decade. Photometrically, the source had a visual magnitude of V ∼ 17.3 between 2002 and 2008. Then, over the following five years, the source slowly brightened by approximately one magnitude, to V ∼ 16.2. Only ∼1 in 10,000 quasars show such extreme variability, as quantified by the extreme parameters derived for this quasar assuming a damped random walk model. A combination of archival and newly acquired spectra reveal the source to be an iron low-ionization broad absorption line quasar with extreme changes in its absorption spectrum. Some absorption features completely disappear over the 9 years of optical spectra, while other features remain essentially unchanged. We report the first definitive redshift for this source, based on the detection of broad H α in a Keck/MOSFIRE spectrum. Absorption systems separated by several 1000 km s{sup −1} in velocity show coordinated weakening in the depths of their troughs as the continuum flux increases. We interpret the broad absorption line variability to be due to changes in photoionization, rather than due to motion of material along our line of sight. This source highlights one sort of rare transition object that astronomy will now be finding through dedicated time-domain surveys.

  9. Lack of dust in quasar absorption line systems

    International Nuclear Information System (INIS)

    Jura, M.

    1977-01-01

    It is stated that the origin of absorption line systems in quasars is still uncertain. Most such systems apparently have atomic hydrogen column densities of the order of 10 19 /cm 2 , but at least two quasars, 1331 + 170 and PHL957, have such strong Lyman α absorption lines that atomic hydrogen column densities of the order of 10 21 /cm 2 are indicated. It should be possible to observe the dust produced 2,200 A extinction feature as it is red shifted into the visible, and to determine whether absorption line systems are produced in spiral galaxies where the dust content is similar to that in the interstellar medium. It has been argued that the emission line regions of quasars generally lack dust and that towards PHL957 the 2,200 A feature is absent. The present author argues that dust similar to that found in the interstellar medium is not found towards the quasars 1331 + 170 and PHL957. This could explain why H 2 is not found towards PHL957, and it indicates that the absorption line systems in quasars are not produced in spiral galaxies similar to our own. It seems from the analysis presented that the dust-to-gas ratio towards 1331 + 170 is at least a factor of 20 less than in the interstellar medium, and there is no reason to suppose that this lack of dust results from a lack of metals It is concluded that there seems to be a lack of normal dust towards PHL957 by at least a factor of two; and that the absorption region towards 1331 + 170 and probably the region towards PHL957 are lacking dust similar to that in our own galaxy. This can explain the lack of H 2 in these systems. (U.K.)

  10. Biophysical Profiling of Tumor Cell Lines

    Directory of Open Access Journals (Sweden)

    Frederick Coffman

    2011-01-01

    Full Text Available Despite significant differences in genetic profiles, cancer cells share common phenotypic properties, including membrane-associated changes that facilitate invasion and metastasis. The Corning Epic® optical biosensor was used to monitor dynamic mass rearrangements within and proximal to the cell membrane in tumor cell lines derived from cancers of the colon, bone, cervix, lung and breast. Data was collected in real time and required no exogenously added signaling moiety (signal-free technology. Cell lines displayed unique profiles over the time-courses: the time-courses all displayed initial signal increases to maximal values, but the rate of increase to those maxima and the value of those maxima were distinct for each cell line. The rate of decline following the maxima also differed among cell lines. There were correlations between the signal maxima and the observed metastatic behavior of the cells in xenograft experiments; for most cell types the cells that were more highly metastatic in mice had lower time-course maxima values, however the reverse was seen in breast cancer cells. The unique profiles of these cell lines and the correlation of at least one profile characteristic with metastatic behavior demonstrate the potential utility of biophysical tumor cell profiling in the study of cancer biology.

  11. Observations of Absorption Lines from Highly Ionized Atoms

    Science.gov (United States)

    Jenkins, E. B.

    1984-01-01

    In the ultraviolet spectra of hot stars, absorption lines can be seen from highly ionized species in the interstellar medium. Observations of these features which have been very influential in revising the perception of the medium's various physical states, are discussed. The pervasiveness of O 6 absorption lines, coupled with complementary observations of a diffuse background in soft X-rays and EUV radiation, shows that there is an extensive network of low density gas (n approx. fewX 0.001/cucm) existing at coronal temperatures, 5.3 or = log T or = 6.3. Shocks created by supernova explosions or mass loss from early-type stars can propagate freely through space and eventually transfer a large amount of energy to the medium. To create the coronal temperatures, the shocks must have velocities in excess of 150 km/sec; shocks at somewhat lower velocity 9v or = 100 km/sec) can be directly observed in the lines of Si3. Observations of other lines in the ultraviolet, such as Si 4V and C 5, may highlight the widespread presence of energetic uv radiation from very hot, dward stars. More advanced techniques in visible and X-ray astronomical spectroscopy may open up for inspection selected lines from atoms in much higher stages of ionization.

  12. Unshifted Metastable He I* Mini-broad Absorption Line System in the Narrow-line Type 1 Quasar SDSS J080248.18+551328.9

    Science.gov (United States)

    Ji, Tuo; Zhou, Hongyan; Jiang, Peng; Wang, Tinggui; Ge, Jian; Wang, Huiyuan; Komossa, S.; Hamann, Fred; Zuther, Jens; Liu, Wenjuan; Lu, Honglin; Zuo, Wenwen; Yang, Chenwei; Yuan, Weimin

    2015-02-01

    We report the identification of an unusual absorption-line system in the quasar SDSS J080248.18+551328.9 and present a detailed study of the system, incorporating follow-up optical and near-IR spectroscopy. A few tens of absorption lines are detected, including He I*, Fe II*, and Ni II*, which arise from metastable or excited levels, as well as resonant lines in Mg I, Mg II, Fe II, Mn II, and Ca II. All of the isolated absorption lines show the same profile of width Δv ~ 1500 km s-1 centered at a common redshift as that of the quasar emission lines, such as [O II], [S II], and hydrogen Paschen and Balmer series. With narrow Balmer lines, strong optical Fe II multiplets, and weak [O III] doublets, its emission-line spectrum is typical for that of a narrow-line Seyfert 1 galaxy (NLS1). We have derived reliable measurements of the gas-phase column densities of the absorbing ions/levels. Photoionization modeling indicates that the absorber has a density of n H ~ (1.0-2.5) × 105 cm-3 and a column density of N H ~ (1.0-3.2) × 1021 cm-2 and is located at R ~100-250 pc from the central supermassive black hole. The location of the absorber, the symmetric profile of the absorption lines, and the coincidence of the absorption- and emission-line centroid jointly suggest that the absorption gas originates from the host galaxy and is plausibly accelerated by stellar processes, such as stellar winds and/or supernova explosions. The implications for the detection of such a peculiar absorption-line system in an NLS1 are discussed in the context of coevolution between supermassive black hole growth and host galaxy buildup.

  13. Line-shape asymmetry of water vapor absorption lines in the 720-nm wavelength region

    Science.gov (United States)

    Grossmann, Benoist E.; Browell, Edward V.

    1991-01-01

    Spectral line-shape analyses were performed for water vapor lines broadened by argon, oxygen, and xenon in the 720-nm wavelength region. A line-shape asymmetry was observed, which is attributed to statistical dependence or correlation between velocity- and state-changing collisions. The generalized (asymmetric) Galatry profile, which results from the soft-collision profile and includes correlation between velocity- and state-changing collisions, was fitted to the observed line shapes and was found to compare favorably with the observed data. The most prominent asymmetries were observed with xenon as the buffer gas.

  14. Quasar outflow energetics from broad absorption line variability

    Science.gov (United States)

    McGraw, S. M.; Shields, J. C.; Hamann, F. W.; Capellupo, D. M.; Herbst, H.

    2018-03-01

    Quasar outflows have long been recognized as potential contributors to the co-evolution between supermassive black holes (SMBHs) and their host galaxies. The role of outflows in active galactic nucleus (AGN) feedback processes can be better understood by placing observational constraints on wind locations and kinetic energies. We utilize broad absorption line (BAL) variability to investigate the properties of a sample of 71 BAL quasars with P V broad absorption. The presence of P V BALs indicates that other BALs like C IV are saturated, such that variability in those lines favours clouds crossing the line of sight. We use these constraints with measurements of BAL variability to estimate outflow locations and energetics. Our data set consists of multiple-epoch spectra from the Sloan Digital Sky Survey and MDM Observatory. We detect significant (4σ) BAL variations from 10 quasars in our sample over rest-frame time-scales between ≤0.2-3.8 yr. Our derived distances for the 10 variable outflows are nominally ≲ 1-10 pc from the SMBH using the transverse-motion scenario, and ≲ 100-1000 pc from the central source using ionization-change considerations. These distances, in combination with the estimated high outflow column densities (i.e. NH ≳ 1022 cm-2), yield outflow kinetic luminosities between ˜ 0.001 and 1 times the bolometric luminosity of the quasar, indicating that many absorber energies within our sample are viable for AGN feedback.

  15. Identification of MgII Absorption Line Systems from SDSS Quasar ...

    Indian Academy of Sciences (India)

    Motivation. The quasar absorption lines are crucial to our understanding of the Universe since the absorption lines provide a wealth of information on the gaseous Universe from high redshift to present day. The absorption lines can also allow us to probe the metallicity and ionization state of the gas (Wild et al. 2008).

  16. A GAS TEMPERATURE PROFILE BY INFRARED EMISSION-ABSORPTION SPECTROSCOPY

    Science.gov (United States)

    Buchele, D. R.

    1994-01-01

    This computer program calculates the temperature profile of a flame or hot gas. Emphasis is on profiles found in jet engine or rocket engine exhaust streams containing water vapor or carbon dioxide as radiating gases. The temperature profile is assumed to be axisymmetric with a functional form controlled by two variable parameters. The parameters are calculated using measurements of gas radiation at two wavelengths in the infrared spectrum. Infrared emission and absorption measurements at two or more wavelengths provide a method of determining a gas temperature profile along a path through the gas by using a radiation source and receiver located outside the gas stream being measured. This permits simplified spectral scanning of a jet or rocket engine exhaust stream with the instrumentation outside the exhaust gas stream. This program provides an iterative-cyclic computation in which an initial assumed temperature profile is altered in shape until the computed emission and absorption agree, within specified limits, with the actual instrument measurements of emission and absorption. Temperature determination by experimental measurements of emission and absorption at two or more wavelengths is also provided by this program. Additionally, the program provides a technique for selecting the wavelengths to be used for determining the temperature profiles prior to the beginning of the experiment. By using this program feature, the experimenter has a higher probability of selecting wavelengths which will result in accurate temperature profile measurements. This program provides the user with a technique for determining whether this program will be sufficiently accurate for his particular application, as well as providing a means of finding the solution. The input to the program consists of four types of data: (1) computer program control constants, (2) measurements of gas radiance and transmittance at selected wavelengths, (3) tabulations from the literature of gas

  17. Impact of line parameter database and continuum absorption on GOSAT TIR methane retrieval

    Science.gov (United States)

    Yamada, A.; Saitoh, N.; Nonogaki, R.; Imasu, R.; Shiomi, K.; Kuze, A.

    2017-12-01

    The current methane retrieval algorithm (V1) at wavenumber range from 1210 cm-1 to 1360 cm-1 including CH4 ν 4 band from the thermal infrared (TIR) band of Thermal and Near-infrared Sensor for Carbon Observation Fourier Transform Spectrometer (TANSO-FTS) onboard Greenhouse Gases Observing Satellite (GOSAT) uses LBLRTM V12.1 with AER V3.1 line database and MT CKD 2.5.2 continuum absorption model to calculate optical depth. Since line parameter databases have been updated and the continuum absorption may have large uncertainty, the purpose of this study is to assess the impact on {CH}4 retrieval from the choice of line parameter databases and the uncertainty of continuum absorption. We retrieved {CH}4 profiles with replacement of line parameter database from AER V3.1 to AER v1.0, HITRAN 2004, HITRAN 2008, AER V3.2, or HITRAN 2012 (Rothman et al. 2005, 2009, and 2013. Clough et al., 2005), we assumed 10% larger continuum absorption coefficients and 50% larger temperature dependent coefficient of continuum absorption based on the report by Paynter and Ramaswamy (2014). We compared the retrieved CH4 with the HIPPO CH4 observation (Wofsy et al., 2012). The difference from HIPPO observation of AER V3.2 was the smallest and 24.1 ± 45.9 ppbv. The differences of AER V1.0, HITRAN 2004, HITRAN 2008, and HITRAN 2012 were 35.6 ± 46.5 ppbv, 37.6 ± 46.3 ppbv, 32.1 ± 46.1 ppbv, and 35.2 ± 46.0 ppbv, respectively. Maximum {CH}4 retrieval differences were -0.4 ppbv at the layer of 314 hPa when we used 10% larger absorption coefficients of {H}2O foreign continuum. Comparing AER V3.2 case to HITRAN 2008 case, the line coupling effect reduced difference by 8.0 ppbv. Line coupling effects were important for GOSAT TIR {CH}4 retrieval. Effects from the uncertainty of continuum absorption were negligible small for GOSAT TIR CH4 retrieval.

  18. Narrow line profiles and interacting gas flows in active galaxies

    International Nuclear Information System (INIS)

    Mardaljevic, J.; Raine, D.J.; Smith, M.D.

    1986-01-01

    The 'catapult model' of the narrow line region involves both infalling and outflowing clouds interacting with an outflowing wind. The emission line profiles in this model are derived and the results compared with observation. Supersonic and subsonic winds in the interaction zone produce distinct line profiles, both of which are observed. Flat-topped profiles, the presence of broad wings, asymmetry and line shifts are discussed. A relationship between profile shape and X-ray properties is predicted. (author)

  19. LINE-BY-LINE CALCULATION OF SPECTRA FROM DIATOMIC MOLECULES AND ATOMS ASSUMING A VOIGT LINE PROFILE

    Science.gov (United States)

    Whiting, E. E.

    1994-01-01

    This program predicts the spectra resulting from electronic transitions of diatomic molecules and atoms in local thermodynamic equilibrium. The program produces a spectrum by accounting for the contribution of each rotational and atomic line considered. The integrated intensity of each line is distributed in the spectrum by an approximate Voigt profile. The program can produce spectra for optically thin gases or for cases where simultaneous emission and absorption occurs. In addition, the program can compute the spectrum resulting from the absorption of incident radiation by a column of cold gas or the high-temperature, self-absorbed emission spectrum from a nonisothermal gas. The computed spectrum can be output directly or combined with a slit function and sensitivity calibration to predict the output of a grating spectrograph or a fixed wavelength radiometer. Specifically, the program has the capability to include the following features in any computations: (1) Parallel transitions, in which spin splitting and lambda doubling are ignored (ignoring spin splitting and/or lambda doubling means that the total multiple strength is assumed to reside in a single "effective" line), (2) Perpendicular transitions, in which spin splitting and lambda doubling are ignored, (3) Sigma Pi transitions, in which lambda doubling is ignored, (4) Atomic lines, (5) Option to terminate rotational line calculations when the molecule dissociates due to rotation, (6) Option to include the alternation of line intensities for homonuclear molecules, (7) Use of an approximate Voigt profile for the line shape, and (8) Radiative energy transport in a nonisothermal gas. The output options available in the program are: (1) Tabulation of the spontaneous emission spectrum (i.e., optically thin spectrum) for a 1.0 cm path length, (2) Tabulation of the "true" spectrum, which incorporates spontaneous emission, induced emission, absorption, and externally incident radiation through the equation of

  20. CIRCUMSTELLAR MOLECULAR LINE ABSORPTION AND EMISSION IN THE OPTICAL-SPECTRA OF POST-AGB STARS

    NARCIS (Netherlands)

    BAKKER, EJ; LAMERS, HJGLM; WATERS, LBFM; SCHOENMAKER, T

    We present a list of post-AGB stars showing molecular line absorption and emission in the optical spectrum. Two objects show CH+, one in emission and one in absorption, and 10 stars show C-2 and CN in absorption. The Doppler velocities of the C-2 lines and the rotational temperatures indicate that

  1. The influence of hyperfine structure on some manganese line profiles in the solar spectrum

    Science.gov (United States)

    Vitas, N.; Vince, I.

    Taking into account effects of hyperfine structure, we calculated the synthetic solar spectrum for wavelength intervals around nine neutral manganese lines. To estimate values of hyperfine components we used the Oxford total absorption oscillator strength measurements (Booth et al. 1983). We compared observed profiles (Photometric Atlas of the Solar Spectrum from 300 to 1000 nm (Delbouille et al. 1973)) of selected manganese lines with synthesized profiles in two cases: when hyperfine structure is not and when it is taken into account. By comparing the calculated with observed spectrum, we corrected the total oscillator strengths of all nine selected manganese lines.

  2. Line by Line Analysis of Carbon Dioxide Absorption for Predicting Global Warming

    Science.gov (United States)

    Smith, D. C.

    2010-12-01

    The anthropologic cause of global warming rests on the impact of CO2 on the green house effect. Previous derivations of the increase in the CO2 Forcing Function caused by doubling of atmospheric CO2 from 320 ppm to 640 ppm reported a value of 4 W/M2( Ramananathan,V,et al, J.of Geophysical Research Vol 84, C8,p4949, Aug.1979) This value leads to a calculated temperature rise of 1 deg.K (Charney,J. et al,”Carbon Dioxide and Climate: A Scientific Assessment”, National Academy of Science, Washington D.C., 1979). This increase in global temperature leads to an increase in water vapor if it is assumed that the relative humidity is constant. This ampflication leads to a calculated temperature rise of an additional 2 deg.K. Different arguments as to the effects of the earth’s albido change, clouds, and the oceans also impact the earths global warming with predictions of total temperature rise of as high as 6 deg.K { IPCC,2007 Summary for Policymakers. In: Climate Change 2007: The Physical Sciences Basis. Contributions of Working Group 1 to the Fourth Assessment Report of the IPCC [ Solomon,S,D. et al (eds)] Cambridge University Press, NY,USA}. Regardless of the other effects, the only way that man can be held responsible for global warming is by CO2 emissions and the resulting increase in the Forcing Function. This paper challenges the magnitude of the 4 W/M2 Forcing Function. The earth radiates in the 4 to 30 micron wavelength range. CO2 has absorption bands in the 4, 10, and 15 micron wavelengths (Hertzberg G. Molecular Spectra & Molecular Structure,Norstrand Co.,1960). McClatchey has tabulated the line stengths for all CO2 transitions and they are used to calculate the atmospheric absorption (McClatchey,R, et al “AFCRL Atmospheric Absorption Line Parameter Compilation”,AFCRL-TR-0096,1973). Detailed calculations of the CO2 line absorption in the 8 to 12 micron atmospheric window shows an increase of 0.3 W/M2 for CO2 doubling. The increase in absorbed fluence in

  3. Early pharmaceutical profiling to predict oral drug absorption

    DEFF Research Database (Denmark)

    Bergström, Christel A S; Holm, René; Jørgensen, Søren Astrup

    2014-01-01

    Preformulation measurements are used to estimate the fraction absorbed in vivo for orally administered compounds and thereby allow an early evaluation of the need for enabling formulations. As part of the Oral Biopharmaceutical Tools (OrBiTo) project, this review provides a summary of the pharmac......Preformulation measurements are used to estimate the fraction absorbed in vivo for orally administered compounds and thereby allow an early evaluation of the need for enabling formulations. As part of the Oral Biopharmaceutical Tools (OrBiTo) project, this review provides a summary...... and state-of-the art methodologies to study API properties impacting on oral absorption are reviewed. Assays performed during early development, i.e. physicochemical characterization, dissolution profiles under physiological conditions, permeability assays and the impact of excipients on these properties...

  4. Reddening and He i{sup ∗} λ 10830 Absorption Lines in Three Narrow-line Seyfert 1 Galaxies

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Shaohua; Zhou, Hongyan; Shi, Xiheng; Pan, Xiang; Ji, Tuo; Jiang, Peng; Wang, Shufen [Polar Research Institute of China, 451 Jinqiao Road, Shanghai, 200136 (China); Liu, Wenjuan [Key Laboratory for the Structure and Evolution of Celestial Objects, Yunnan Observatories, Chinese Academy of Sciences, Kunming, Yunnan 650011 (China); Jiang, Ning, E-mail: zhangshaohua@pric.org.cn, E-mail: zhouhongyan@pric.org.cn [Key Laboratory for Researches in Galaxies and Cosmology, Department of Astronomy, University of Sciences and Technology of China, Chinese Academy of Sciences, Hefei, Anhui, 230026 (China)

    2017-08-20

    We report the detection of heavy reddening and the He i* λ 10830 absorption lines at the active galactic nucleus (AGN) redshift in three narrow-line Seyfert 1 galaxies: SDSS J091848.61+211717.0, SDSS J111354.66+124439.0, and SDSS J122749.13+321458.9. They exhibit very red optical to near-infrared colors, narrow Balmer/Paschen broad emission lines and He i* λ 10830 absorption lines. The ultraviolet-optical-infrared nucleus continua are reddened by the SMC extinction law of E ( B − V ) ∼ 0.74, 1.17, and 1.24 mag for three objects, which are highly consistent with the values obtained from the broad-line Balmer decrements, but larger than those of narrow emission lines. The reddening analysis suggests that the extinction dust simultaneously obscures the accretion disk, the broad emission-line region, and the hot dust from the inner edge of the torus. It is possible that the dust obscuring the AGN structures is the dusty torus itself. Furthermore, the Cloudy analysis of the He i* λ 10830 absorption lines proposes the distance of the absorption materials to be the extend scale of the torus, which greatly increases probabilities of the obscure and absorption materials being the dusty torus.

  5. Discovery of carbon radio recombination lines in absorption towards Cygnus A

    NARCIS (Netherlands)

    Oonk, J.B.R.; et al., [Unknown; Alexov, A.; Hessels, J.W.T.; van der Horst, A.; van Leeuwen, J.; Markoff, S.; Miller-Jones, J.C.A.; Swinbank, J.; Wijers, R.A.M.J.

    2014-01-01

    We present the first detection of carbon radio recombination line absorption along the line of sight to Cygnus A. The observations were carried out with the Low Frequency Array in the 33-57 MHz range. These low-frequency radio observations provide us with a new line of sight to study the diffuse,

  6. Discovery of carbon radio recombination lines in absorption towards Cygnus A

    NARCIS (Netherlands)

    Oonk, J. B. R.; van Weeren, R. J.; Salgado, F.; Morabito, L. K.; Tielens, A. G. G. M.; Rottgering, H. J. A.; Asgekar, A.; White, G. J.; Alexov, A.; Anderson, J.; Avruch, I. M.; Batejat, F.; Beck, R.; Bell, M. E.; van Bemmel, I.; Bentum, M. J.; Bernardi, G.; Best, P.; Bonafede, A.; Breitling, F.; Brentjens, M.; Broderick, J.; Brüggen, M.; Butcher, H. R.; Ciardi, B.; Conway, J. E.; Corstanje, A.; de Gasperin, F.; de Geus, E.; de Vos, M.; Duscha, S.; Eislöffel, J.; Engels, D.; van Enst, J.; Falcke, H.; Fallows, R. A.; Fender, R.; Ferrari, C.; Frieswijk, W.; Garrett, M. A.; Grießmeier, J.; Hamaker, J. P.; Hassall, T. E.; Heald, G.; Hessels, J. W. T.; Hoeft, M.; Horneffer, A.; van der Horst, A.; Iacobelli, M.; Jackson, N. J.; Juette, E.; Karastergiou, A.; Klijn, W.; Kohler, J.; Kondratiev, V. I.; Kramer, M.; Kuniyoshi, M.; Kuper, G.; van Leeuwen, J.; Maat, P.; Macario, G.; Mann, G.; Markoff, S.; McKean, J. P.; Mevius, M.; Miller-Jones, J. C. A.; Mol, J. D.; Mulcahy, D. D.; Munk, H.; Norden, M. J.; Orru, E.; Paas, H.; Pandey-Pommier, M.; Pandey, V. N.; Pizzo, R.; Polatidis, A. G.; Reich, W.; Scaife, A. M. M.; Schoenmakers, A.; Schwarz, D.; Shulevski, A.; Sluman, J.; Smirnov, O.; Sobey, C.; Stappers, B. W.; Steinmetz, M.; Swinbank, J.; Tagger, M.; Tang, Y.; Tasse, C.; Veen, S. ter; Thoudam, S.; Toribio, C.; van Nieuwpoort, R.; Vermeulen, R.; Vocks, C.; Vogt, C.; Wijers, R. A. M. J.; Wise, M. W.; Wucknitz, O.; Yatawatta, S.; Zarka, P.; Zensus, A.

    We present the first detection of carbon radio recombination line absorption along the line of sight to Cygnus A. The observations were carried out with the Low Frequency Array in the 33-57 MHz range. These low-frequency radio observations provide us with a new line of sight to study the diffuse,

  7. Dependence of plasma profiles on ECH power absorption in Heliotron-E

    International Nuclear Information System (INIS)

    Nagasaki, Kazunobu; Mizuuchi, Tohru; Besshou, Sakae

    1998-01-01

    Dependence of plasma profiles on the power absorption of electron cyclotron heating is experimentally studied in the Heliotron-E helical device. A focused Gaussian beam with controllable polarization makes it possible to change the power absorption. The electron density and temperature profiles are sensitive to the single pass absorption rate. The electron temperature profile is peaked and the density profile is hollow as the single pass absorption increases. The resonance position is also important for determining their profiles. The electron temperature profile is changed from a peaked one to a hollow one, depending on the resonance position. The non-diffusive outward flow, which is necessary to form a hollow temperature profile, is estimated by using a simple heat transport model. (author)

  8. Radio line and continuum observations of quasar-galaxy pairs and the origin of low reshift quasar absorption line systems

    Science.gov (United States)

    Carilli, C. L.; Vangorkom, J. H.; Hauxthausen, E. M.; Stocke, J. T.; Salzer, J.

    1990-01-01

    There are a number of known quasars for which our line of sight to the high redshift quasar passes within a few Holmberg radii of a low redshift galaxy. In a few of these cases, spectra of the quasar reveal absorption by gas associated with the low redshift galaxy. A number of these pairs imply absorption by gas which lies well outside the optical disk of the associated galaxy, leading to models of galaxies with 'halos' or 'disks' of gas extending to large radii. The authors present observations of 4 such pairs. In three of the four cases, they find that the associated galaxy is highly disturbed, typically due to a gravitational interaction with a companion galaxy, while in the fourth case the absorption can be explained by clouds in the optical disk of the associated galaxy. They are led to an alternative hypothesis concerning the origin of the low redshift absorption line systems: the absorption is by gas clouds which have been gravitationally stripped from the associated galaxy. These galaxies are rapidly evolving, and should not be used as examples of absorption by clouds in halos of field spirals. The authors conclude by considering the role extended gas in interacting systems plays in the origin of higher redshift quasar absorption line systems.

  9. Variety of Polarized Line Profiles in Interacting Supernovae

    Science.gov (United States)

    Hoffman, Jennifer L.; Huk, L. N.; Peters, C. L.

    2013-01-01

    The dense circumstellar material that creates strong emission lines in the spectra of interacting supernovae also gives rise to complex line polarization behavior. Viewed in polarized light, the emission line profiles of these supernovae encode information about the geometrical and optical characteristics of their surrounding circumstellar material (CSM) that is inaccessible by other observational techniques. To facilitate quantitative interpretation of these spectropolarimetric signatures, we have created a large grid of model polarized line profiles using a three-dimensional radiative transfer code that simulates polarization via electron and resonant/fluorescent line scattering. The simulated polarized lines take on an array of profile shapes that vary with viewing angle and CSM properties. We present the major results from the grid and investigate the dependence of polarized line profiles on CSM characteristics including temperature, optical depth, and geometry. These results will allow more straightforward interpretation of polarized line profiles in interacting supernovae than has previously been possible. This research is supported by the National Science Foundation through the AAG program and the XSEDE collaboration, and uses the resources of the Texas Advanced Computing Center.

  10. Spectral line profiles in weakly turbulent plasmas

    International Nuclear Information System (INIS)

    Capes, H.; Voslamber, D.

    1976-07-01

    The unified theory of line broadening by electron perturbers is generalized to include the case of a weakly turbulent plasma. The collision operator in the line shape expression is shown to be the sum of two terms, both containing effects arising from the non-equilibrium nature of the plasma. One of the two terms represents the influence of individual atom-particle interactions occuring via the nonequilibrium dielectric plasma medium. The other term is due to the interaction of the atom with the turbulent waves. Both terms contain damping and diffusion effects arising from the plasma turbulence

  11. The dependence of C IV broad absorption line properties on accompanying Si IV and Al III absorption: relating quasar-wind ionization levels, kinematics, and column densities

    Energy Technology Data Exchange (ETDEWEB)

    Filiz Ak, N.; Brandt, W. N.; Schneider, D. P.; Trump, J. R. [Department of Astronomy and Astrophysics, Pennsylvania State University, University Park, PA 16802 (United States); Hall, P. B. [Department of Physics and Astronomy, York University, 4700 Keele Street, Toronto, Ontario M3J 1P3 (Canada); Anderson, S. F. [Astronomy Department, University of Washington, Seattle, WA 98195 (United States); Hamann, F. [Department of Astronomy, University of Florida, Gainesville, FL 32611-2055 (United States); Myers, Adam D. [Department of Physics and Astronomy, University of Wyoming, Laramie, WY 82071 (United States); Pâris, I. [Departamento de Astronomía, Universidad de Chile, Casilla 36-D, Santiago (Chile); Petitjean, P. [Institut d' Astrophysique de Paris, Universite Paris 6, F-75014 Paris (France); Ross, Nicholas P. [Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 94720 (United States); Shen, Yue [Carnegie Observatories, 813 Santa Barbara Street, Pasadena, CA 91101 (United States); York, Don, E-mail: nfilizak@astro.psu.edu [Department of Astronomy and Astrophysics, The University of Chicago, Chicago, IL 60637 (United States)

    2014-08-20

    We consider how the profile and multi-year variability properties of a large sample of C IV Broad Absorption Line (BAL) troughs change when BALs from Si IV and/or Al III are present at corresponding velocities, indicating that the line of sight intercepts at least some lower ionization gas. We derive a number of observational results for C IV BALs separated according to the presence or absence of accompanying lower ionization transitions, including measurements of composite profile shapes, equivalent width (EW), characteristic velocities, composite variation profiles, and EW variability. We also measure the correlations between EW and fractional-EW variability for C IV, Si IV, and Al III. Our measurements reveal the basic correlated changes between ionization level, kinematics, and column density expected in accretion-disk wind models; e.g., lines of sight including lower ionization material generally show deeper and broader C IV troughs that have smaller minimum velocities and that are less variable. Many C IV BALs with no accompanying Si IV or Al III BALs may have only mild or no saturation.

  12. Performance study of quadrupole with broken line profile pole tip

    International Nuclear Information System (INIS)

    Fan Mingwu; Zhang Tianjue; Chu Chengjie

    1997-01-01

    Most of quadrupole used for beam focusing possess hyperbola profile tip. To simplify machining processes and ensure the assembling accuracy, a broken line profile pole tip is adapted instead of hyperbola. The results of the magnetic field simulation codes and the tests show the good quality field generated by such configuration: not only more uniform field gradient, but also field more concentrated at useful area. These types of quadrupole are used at CYCIAE-30 cyclotron and HI-13 tandem transportation lines

  13. Discovery of Variable Hydrogen Balmer Absorption Lines with Inverse Decrement in PG 1411+442

    Energy Technology Data Exchange (ETDEWEB)

    Shi, Xi-Heng; Pan, Xiang; Zhang, Shao-Hua; Sun, Lu-Ming; Ji, Tuo; Liu, Bo; Zhou, Hong-Yan [Polar Research Institute of China, Jinqiao Road 451, Shanghai 200136 (China); Wang, Jian-Guo [Yunnan Observatories, Chinese Academy of Sciences, Kunming, Yunnan 650011 (China); Yang, Chen-Wei; Jiang, Ning, E-mail: zhouhongyan@pric.org.cn, E-mail: shixiheng@pric.org.cn [Key Laboratory for Research in Galaxies and Cosmology, Department of Astronomy, University of Science and Technology of China, Chinese Academy of Sciences, Hefei, Anhui 230026 (China)

    2017-07-01

    We present new optical spectra of the well-known broad absorption line (BAL) quasar PG 1411+442, using the DBSP spectrograph at the Palomar 200 inch telescope in 2014 and 2017 and the YFOSC spectrograph at the Lijiang 2.4 m telescope in 2015. A blueshifted narrow absorption line system is clearly revealed in 2014 and 2015 consisting of hydrogen Balmer series and metastable He i lines. The velocity of these lines is similar to the centroid velocity of the UV BALs, suggesting that both originate from the outflow. The Balmer lines vary significantly between the two observations and vanished in 2017. They were also absent in the archived spectra obtained before 2001. The variation is thought to be driven by photoionization change. Besides, the absorption lines show inversed Balmer decrement, i.e., the apparent optical depths of higher-order Balmer absorption lines are larger than those of lower-order lines, which is inconsistent with the oscillator strengths of the transitions. We suggest that such anomalous line ratios can be naturally explained by the thermal structure of a background accretion disk, which allows the obscured part of the disk to contribute differently to the continuum flux at different wavelengths. High-resolution spectroscopic and photometric monitoring would be very useful to probe the structure of the accretion disk as well as the geometry and physical conditions of the outflow.

  14. Discovery of Variable Hydrogen Balmer Absorption Lines with Inverse Decrement in PG 1411+442

    Science.gov (United States)

    Shi, Xi-Heng; Pan, Xiang; Zhang, Shao-Hua; Sun, Lu-Ming; Wang, Jian-Guo; Ji, Tuo; Yang, Chen-Wei; Liu, Bo; Jiang, Ning; Zhou, Hong-Yan

    2017-07-01

    We present new optical spectra of the well-known broad absorption line (BAL) quasar PG 1411+442, using the DBSP spectrograph at the Palomar 200 inch telescope in 2014 and 2017 and the YFOSC spectrograph at the Lijiang 2.4 m telescope in 2015. A blueshifted narrow absorption line system is clearly revealed in 2014 and 2015 consisting of hydrogen Balmer series and metastable He I lines. The velocity of these lines is similar to the centroid velocity of the UV BALs, suggesting that both originate from the outflow. The Balmer lines vary significantly between the two observations and vanished in 2017. They were also absent in the archived spectra obtained before 2001. The variation is thought to be driven by photoionization change. Besides, the absorption lines show inversed Balmer decrement, I.e., the apparent optical depths of higher-order Balmer absorption lines are larger than those of lower-order lines, which is inconsistent with the oscillator strengths of the transitions. We suggest that such anomalous line ratios can be naturally explained by the thermal structure of a background accretion disk, which allows the obscured part of the disk to contribute differently to the continuum flux at different wavelengths. High-resolution spectroscopic and photometric monitoring would be very useful to probe the structure of the accretion disk as well as the geometry and physical conditions of the outflow.

  15. C IV BROAD ABSORPTION LINE ACCELERATION IN SLOAN DIGITAL SKY SURVEY QUASARS

    Energy Technology Data Exchange (ETDEWEB)

    Grier, C. J.; Brandt, W. N.; Trump, J. R.; Schneider, D. P.; Sun, M.; Beatty, T. G. [Department of Astronomy and Astrophysics, The Pennsylvania State University, 525 Davey Laboratory, University Park, PA 16802 (United States); Hall, P. B. [Department of Physics and Astronomy, York University, Toronto, ON M3J 1P3 (Canada); Filiz Ak, N. [Faculty of Sciences, Department of Astronomy and Space Sciences, Erciyes University, 38039 Kayseri (Turkey); Anderson, S. F. [Department of Astronomy, University of Washington, Box 351580, Seattle, WA 98195 (United States); Green, Paul J. [Harvard Smithsonian Center for Astrophysics, 60 Garden St, Cambridge, MA 02138 (United States); Vivek, M.; Brownstein, Joel R. [Department of Physics and Astronomy, University of Utah, 115 S. 1400 E., Salt Lake City, UT 84112 (United States); Roman-Lopes, Alexandre, E-mail: grier@psu.edu [Departamento de Fisica, Facultad de Ciencias, Universidad de La Serena, Cisternas 1200, La Serena (Chile)

    2016-06-20

    We present results from the largest systematic investigation of broad absorption line (BAL) acceleration to date. We use spectra of 140 quasars from three Sloan Digital Sky Survey programs to search for global velocity offsets in BALs over timescales of ≈2.5–5.5 years in the quasar rest frame. We carefully select acceleration candidates by requiring monolithic velocity shifts over the entire BAL trough, avoiding BALs with velocity shifts that might be caused by profile variability. The C iv BALs of two quasars show velocity shifts consistent with the expected signatures of BAL acceleration, and the BAL of one quasar shows a velocity-shift signature of deceleration. In our two acceleration candidates, we see evidence that the magnitude of the acceleration is not constant over time; the magnitudes of the change in acceleration for both acceleration candidates are difficult to produce with a standard disk-wind model or via geometric projection effects. We measure upper limits to acceleration and deceleration for 76 additional BAL troughs and find that the majority of BALs are stable to within about 3% of their mean velocities. The lack of widespread acceleration/deceleration could indicate that the gas producing most BALs is located at large radii from the central black hole and/or is not currently strongly interacting with ambient material within the host galaxy along our line of sight.

  16. What Sets the Line Profiles in Tidal Disruption Events?

    Science.gov (United States)

    Roth, Nathaniel; Kasen, Daniel

    2018-03-01

    We investigate line formation in gas that is outflowing and optically thick to electron scattering, as may be expected following the tidal disruption of a star by a supermassive black hole. Using radiative transfer calculations, we show that the optical line profiles produced by expanding TDE outflows most likely are primarily emission features, rather than the P-Cygni profiles seen in most supernova spectra. This is a result of the high line excitation temperatures in the highly irradiated TDE gas. The outflow kinematics cause the emission peak to be blueshifted and have an asymmetric red wing. Such features have been observed in some TDE spectra, and we propose that these may be signatures of outflows. We also show that non-coherent scattering of hot electrons can broaden the emission lines by ∼10,000 km s‑1, such that the line width in some TDEs may be set by the electron scattering optical depth rather than the gas kinematics. The scattering-broadened line profiles produce distinct, wing-shaped profiles that are similar to those observed in some TDE spectra. The narrowing of the emission lines over time in these observed events may be related to a drop in density rather than a drop in line-of-sight velocity.

  17. Spectral line shapes in linear absorption and two-dimensional spectroscopy with skewed frequency distributions

    NARCIS (Netherlands)

    Farag, Marwa H.; Hoenders, Bernhard J.; Knoester, Jasper; Jansen, Thomas L. C.

    2017-01-01

    The effect of Gaussian dynamics on the line shapes in linear absorption and two-dimensional correlation spectroscopy is well understood as the second-order cumulant expansion provides exact spectra. Gaussian solvent dynamics can be well analyzed using slope line analysis of two-dimensional

  18. On the analysis of line profile variations: A statistical approach

    International Nuclear Information System (INIS)

    McCandliss, S.R.

    1988-01-01

    This study is concerned with the empirical characterization of the line profile variations (LPV), which occur in many of and Wolf-Rayet stars. The goal of the analysis is to gain insight into the physical mechanisms producing the variations. The analytic approach uses a statistical method to quantify the significance of the LPV and to identify those regions in the line profile which are undergoing statistically significant variations. Line positions and flux variations are then measured and subject to temporal and correlative analysis. Previous studies of LPV have for the most part been restricted to observations of a single line. Important information concerning the range and amplitude of the physical mechanisms involved can be obtained by simultaneously observing spectral features formed over a range of depths in the extended mass losing atmospheres of massive, luminous stars. Time series of a Wolf-Rayet and two of stars with nearly complete spectral coverage from 3940 angstrom to 6610 angstrom and with spectral resolution of R = 10,000 are analyzed here. These three stars exhibit a wide range of both spectral and temporal line profile variations. The HeII Pickering lines of HD 191765 show a monotonic increase in the peak rms variation amplitude with lines formed at progressively larger radii in the Wolf-Rayet star wind. Two times scales of variation have been identified in this star: a less than one day variation associated with small scale flickering in the peaks of the line profiles and a greater than one day variation associated with large scale asymmetric changes in the overall line profile shapes. However, no convincing period phenomena are evident at those periods which are well sampled in this time series

  19. LINE PROFILE ASYMMETRIES AND THE CHROMOSPHERIC FLARE VELOCITY FIELD

    Energy Technology Data Exchange (ETDEWEB)

    Kuridze, D.; Mathioudakis, M.; Kennedy, M.; Keenan, F. P. [Astrophysics Research Centre, School of Mathematics and Physics, Queen’s University Belfast BT7 1NN (United Kingdom); Simões, P. J. A.; Voort, L. Rouppe van der; Fletcher, L. [SUPA School of Physics and Astronomy, University of Glasgow, Glasgow G12 8QQ (United Kingdom); Carlsson, M.; Jafarzadeh, S. [Institute of Theoretical Astrophysics, University of Oslo, P.O. Box 1029 Blindern, NO-0315 Oslo (Norway); Allred, J. C.; Kowalski, A. F. [Department of Astronomy, University of Maryland, College Park, MD 20742 (United States); Graham, D. [INAF-Ossevatorio Astrofisico di Arcetri, I-50125 Firenze (Italy)

    2015-11-10

    The asymmetries observed in the line profiles of solar flares can provide important diagnostics of the properties and dynamics of the flaring atmosphere. In this paper the evolution of the Hα and Ca ii λ8542 lines are studied using high spatial, temporal, and spectral resolution ground-based observations of an M1.1 flare obtained with the Swedish 1 m Solar Telescope. The temporal evolution of the Hα line profiles from the flare kernel shows excess emission in the red wing (red asymmetry) before flare maximum and excess in the blue wing (blue asymmetry) after maximum. However, the Ca ii λ8542 line does not follow the same pattern, showing only a weak red asymmetry during the flare. RADYN simulations are used to synthesize spectral line profiles for the flaring atmosphere, and good agreement is found with the observations. We show that the red asymmetry observed in Hα is not necessarily associated with plasma downflows, and the blue asymmetry may not be related to plasma upflows. Indeed, we conclude that the steep velocity gradients in the flaring chromosphere modify the wavelength of the central reversal in the Hα line profile. The shift in the wavelength of maximum opacity to shorter and longer wavelengths generates the red and blue asymmetries, respectively.

  20. PG 1700 + 518 - a low-redshift, broad absorption line QSO

    International Nuclear Information System (INIS)

    Pettini, M.; Boksenberg, A.

    1985-01-01

    The first high-resolution optical spectra and lower resolution UV spectra of PG 1700 + 518, the only known broad-absorption-line (BAL) QSO at low emission redshift (0.288) are presented. The optical data were obtained with the Isaac Newton Telescope on the island of La Palma and the UV data with the International Ultraviolet Explorer satellite. The outstanding feature of the optical spectrum is a strong, broad Mg II absorption trough, detached from the Mg II emission line and indicative of ejection velocities of between 7000 and 18,000 km/s. Also detected were narrow (FWHM = 350 km/s) Mg II absorption lines at absolute z = 0.2698, which are probably related to the mass ejection phenomenon. It is concluded that the emission-line spectrum is similar to that of other low-redshift QSOs although there are some obvious differences from typical BAL QSOs, most notably in the unusually low level of ionization of both emission-line and broad absorption line gas. 21 references

  1. Radiatively driven winds for different power law spectra. [for explaining narrow and broad quasar absorption lines

    Science.gov (United States)

    Beltrametti, M.

    1980-01-01

    The analytic solutions for radiatively driven winds are given for the case in which the winds are driven by absorption of line and continuum radiation. The wind solutions are analytically estimated for different parameters of the central source and for different power law spectra. For flat spectra, three sonic points can exist; it is shown, however, that only one of these sonic points is physically realistic. Parameters of the central source are given which generate winds of further interest for explaining the narrow and broad absorption lines in quasars. For the quasar model presented here, winds which could give rise to the narrow absorption lines are generated by central sources with parameters which are not realistic for quasars.

  2. Observing broad-absorption line quasars with Spectrum-Rontgen-Gamma

    DEFF Research Database (Denmark)

    Singh, K.P.; Schnopper, H.W.; Westergaard, Niels Jørgen Stenfeldt

    1998-01-01

    Broad-absorption line quasars are found to have extremely weak soft X-ray emission when compared with other optically selected quasars. In the only example of PHL 5200 for which a detailed X-ray spectrum has been obtained with ASCA, strong absorption in the source appears to be responsible...... for the lack of soft Xray emission. Broad-band X-ray observations of a sample of BAL QSOs are proposed with a high throughput mission SPECTRUM-RONTGEN-GAMMA (SRG), to find out whether these sources are intrinsically weak over the entire bandwidth of X-rays or only in the soft X-rays due to absorption resulting...

  3. Predicted sound absorption coefficients of absorber materials lined in a chamber

    Directory of Open Access Journals (Sweden)

    Farhad Forouharmajd

    2014-01-01

    Full Text Available Aims: The present study was aimed to measurement of sound absorption coefficient of mineral wool and determination of their absorption ability. Materials and Methods: Mineral wool was used to find noise absorption coefficient. Random and normal sound absorption coefficient values were predicted. Then, the measures of transmission loss calculated as an overall value, for applied absorbent material and bare sheet metal. Results: The measured values of noise with one octave band frequency demonstrated an attenuation of 5.5-7 dB for these frequencies. The absorption coefficients of materials showed that mineral wool had more normal sound coefficients than its random sound absorption coefficient values. Conclusion: It can be concluded that predicted normal sound absorption coefficients of used mineral wool materials were near to the areas of standard line. It seems that the amount or thickness of absorbent lining was a main reason of noise reduction in low band frequencies. Mineral wool has a higher density and can provide better acoustical and insulating results than fiberglass. Besides, mineral wool doesn′t lose its insulating value when wet and has an outstanding resistance to fire.

  4. Repetitive display system of line profiles for Doppler broadening measurement

    International Nuclear Information System (INIS)

    Mohri, A.; Narihara, K.; Haba, K.

    1982-10-01

    Line profiles of impurities in visible and ultraviolet regions are repetitively displayed on a CRT with an interval of 250 mu s or 500 mu s, using a system composed of a Czerny-Turner monochromator with 1 m F.L., a self-resonant optical scanner, a photomultiplier shielded against hard X-rays and electronic circuits. The profile resolution is 0.035 nm FWHM. This system can be used in the environment of strong hard X-rays. (author)

  5. VizieR Online Data Catalog: QSOs narrow absorption line variability (Hacker+, 2013)

    Science.gov (United States)

    Hacker, T. L.; Brunner, R. J.; Lundgren, B. F.; York, D. G.

    2013-06-01

    Catalogues of 2,522 QAL systems and 33 variable NAL systems detected in SDSS DR7 quasars with repeat observations. The object identifiers, position coordinates, and plate-MJD-fibre designations are taken from the SpecObjAll table in the SDSS Catalogue Archive Server (CAS) while the quasar redshifts (zqso) are from Hewett & Wild (2010, Cat. J/MNRAS/405/2302). The absorption system redshift (zabs), system grade, and detected lines are outputs of the York et al. (2013, in. prep.) QAL detection pipeline. Some absorption lines are flagged based on alternate identifications (a), proximity of masked pixels (b), or questionable continuum fits (c). (3 data files).

  6. An absorption profile centred at 78 megahertz in the sky-averaged spectrum

    Science.gov (United States)

    Bowman, Judd D.; Rogers, Alan E. E.; Monsalve, Raul A.; Mozdzen, Thomas J.; Mahesh, Nivedita

    2018-03-01

    After stars formed in the early Universe, their ultraviolet light is expected, eventually, to have penetrated the primordial hydrogen gas and altered the excitation state of its 21-centimetre hyperfine line. This alteration would cause the gas to absorb photons from the cosmic microwave background, producing a spectral distortion that should be observable today at radio frequencies of less than 200 megahertz. Here we report the detection of a flattened absorption profile in the sky-averaged radio spectrum, which is centred at a frequency of 78 megahertz and has a best-fitting full-width at half-maximum of 19 megahertz and an amplitude of 0.5 kelvin. The profile is largely consistent with expectations for the 21-centimetre signal induced by early stars; however, the best-fitting amplitude of the profile is more than a factor of two greater than the largest predictions. This discrepancy suggests that either the primordial gas was much colder than expected or the background radiation temperature was hotter than expected. Astrophysical phenomena (such as radiation from stars and stellar remnants) are unlikely to account for this discrepancy; of the proposed extensions to the standard model of cosmology and particle physics, only cooling of the gas as a result of interactions between dark matter and baryons seems to explain the observed amplitude. The low-frequency edge of the observed profile indicates that stars existed and had produced a background of Lyman-α photons by 180 million years after the Big Bang. The high-frequency edge indicates that the gas was heated to above the radiation temperature less than 100 million years later.

  7. White line structure in the x-ray Lsub(III) absorption edge of holmium

    International Nuclear Information System (INIS)

    Agarwal, B.K.; Agarwal, B.R.K.

    1978-01-01

    The white line at the Ho Lsub(III) absorption edge has been recorded in Ho metal, Ho 2 O 3 and HoCl 3 . The white line structure in Ho 2 O 3 has been analysed by regarding it as due to the transition into bound states of the Lsub(III) excited ion. The extended fine structure has been used to obtain information on the bond lengths in the compounds. (author)

  8. Non-LTE profiles of strong solar lines

    Science.gov (United States)

    Schneeberger, T. J.; Beebe, H. A.

    1976-01-01

    The complete linearization method is applied to the formation of strong lines in the solar atmosphere. Transitions in Na(I), Mg(I), Ca(I), Mg(II), and Ca(II) are computed with a standard atmosphere and microturbulent velocity model. The computed profiles are compared to observations at disk center.

  9. Occurrence and Global Properties of Narrow CIV lambda 1549 Absorption Lines in Moderate-Redshift Quasars

    DEFF Research Database (Denmark)

    Vestergaard, Marianne

    2003-01-01

    A statistical study is presented of (a) the frequency of narrow CIV lambda 1549 absorption lines in 1.5 ~50%) of narrow CIV absorbers is detected for the radio-quiet and radio-loud quasars, and a constant ~25% of all the quasars, irrespective of radio type display associated CIV absorbers stronger...... than a rest equivalent width of 0.5A. Both radio-quiet and radio-loud quasars with narrow absorption lines have systematically redder continua, especially strongly absorbed objects. There is evidence of inclination dependent dust reddening and absorption for the radio quasars. An additional key result...... is that the most strongly absorbed radio quasars have the largest radio source extent. This result is in stark contrast to a recent study of the low-frequency selected Molonglo survey in which a connection between the strength of the narrow absorbers and the (young) age of the radio source has been proposed...

  10. Absorption-line strengths of 18 late-type spiral galaxies observed with SAURON

    NARCIS (Netherlands)

    Ganda, Katia; Peletier, Reynier F.; McDermid, Richard M.; Falcon-Barroso, Jesus; de Zeeuw, P. T.; Bacon, Roland; Cappellari, Michele; Davies, Roger L.; Emsellem, Eric; Krajnovic, Davor; Kuntschner, Harald; Sarzi, Marc; van de Ven, Glenn

    2007-01-01

    We present absorption line strength maps for a sample of 18 Sb-Sd galaxies observed using the integral-field spectrograph SAURON operating at the William Herschel Telescope on La Palma, as part of a project devoted to the investigation of the kinematics and stellar populations of late-type spirals,

  11. Study of cancer cell lines with Fourier transform infrared (FTIR)/vibrational absorption (VA) spectroscopy

    DEFF Research Database (Denmark)

    Uceda Otero, E. P.; Eliel, G. S. N.; Fonseca, E. J. S.

    2013-01-01

    In this work we have used Fourier transform infrared (FTIR) / vibrational absorption (VA) spectroscopy to study two cancer cell lines: the Henrietta Lacks (HeLa) human cervix carcinoma and 5637 human bladder carcinoma cell lines. Our goal is to experimentally investigate biochemical changes...... and differences in these cells lines utilizing FTIR spectroscopy. We have used the chemometrical and statistical method principal component analysis (PCA) to investigate the spectral differences. We have been able to identify certain bands in the spectra which are so-called biomarkers for two types of cell lines......, three groups for the 5637 human bladder carcinoma cell line (5637A, 5637B and 5637C), and another one for the HeLa human cervix carcinoma cell line. The vibrational modes can be assigned to specific bands involving characteristic motions of the protein backbone. This work shows that infrared vibrational...

  12. line profile variability of seven southern Be stars

    International Nuclear Information System (INIS)

    Mennickent, R.E.

    1991-01-01

    The results of spectroscopic observations of six B0-B4e and one B7e stars at the Manuel Foster Observatory (Chile) during 1984-87 are reported. By means of photographic spectroscopy (20 A/mm), equivalent widths, peak separations and V/R ratios were obtained for a total of 106 Hβ and 7 Hγ line profiles. Emission episodes in Hβ were detected in 27 CMa and λ Pav, lasting at least 5 months and 18 days respectively. Significant variations in the equivalent width of the Hβ emission line W β in time scales of months were found in κ CMa, PP Car and QY Car

  13. Absorption and emission profiles of unresolved arrays near local thermodynamic equilibrium

    International Nuclear Information System (INIS)

    Busquet, M.; Klapisch, M.; Bar-Shalom, A.

    2003-01-01

    The absorption and emission arrays in the unresolved transition array (UTA) and super transition array (STA) models are usually assumed to have the same Gaussian spectral shape. It is shown, starting from a Boltzmann population distribution, that the assumption of profile identity for both absorption and emission is inconsistent with Kirchhoff's law. A correcting formula is established. It is extended to the cases where one or two effective population temperatures are involved. Examples are shown where the effect is noticeable

  14. Neutron absorption profile in a reactor moderated by different mixtures of light and heavy waters

    International Nuclear Information System (INIS)

    Nagy, Mohamed E.; Aly, Mohamed N.; Gaber, Fatma A.; Dorrah, Mahmoud E.

    2014-01-01

    Highlights: • We studied neutron absorption spectra in a mixed water moderated reactor. • Changing D 2 O% in moderator induced neutron energy spectral shift. • Most of the neutrons absorbed in control rods were epithermal. • Control rods worth changes were not proportional to changes of D 2 O% in moderator. • Control rod arrangement influenced the neutronic behavior of the reactor. - Abstract: A Monte-Carlo parametric study was carried out to investigate the neutron absorption profile in a model of LR-0 reactor when it is moderated by different mixtures of heavy/light waters at molecular ratios ranging from 0% up to 100% D 2 O at increments of 10% in D 2 O. The tallies included; neutron absorption profiles in control rods and moderator, and neutron capture profile in 238 U. The work focused on neutron absorption in control rods entailing; total mass of control rods needed to attain criticality, neutron absorption density and total neutron absorption in control rods at each of the studied mixed water moderators. The aim was to explore whether thermal neutron poisons are the most suitable poisons to be used in control rods of nuclear reactors moderated by mixed heavy/light water moderators

  15. Velocity profiles of high-excitation molecular hydrogen lines

    International Nuclear Information System (INIS)

    Moorhouse, A.; Brand, P.W.J.L.; Burton, M.G.

    1990-01-01

    Profiles of three lines of molecular hydrogen near 2.2 μm, originating from widely spaced energy levels, have been measured at a resolution of 32 km s -1 at Peak 1 in the Orion molecular outflow. The three lines [1 - O S(1), 2 - 1 S(1) and 3 - 2 S(3)] are found to have identical profiles. This result rules out any significant contribution to the population of the higher energy levels of molecular hydrogen at Peak 1 by fluorescence, is inconsistent with multiple C-shock models which produce higher excitation temperatures at larger shock velocities, and is generally consistent with emission from multiple J-type shocks. (author)

  16. Impact of line parameter database, continuum absorption, full grind configuration, and L1B update on GOSAT TIR methane retrieval

    Science.gov (United States)

    Yamada, A.; Saitoh, N.; Nonogaki, R.; Imasu, R.; Shiomi, K.; Kuze, A.

    2016-12-01

    The thermal infrared (TIR) band of Thermal and Near-infrared Sensor for Carbon Observation Fourier Transform Spectrometer (TANSO-FTS) onboard Greenhouse Gases Observing Satellite (GOSAT) observes CH4 profile at wavenumber range from 1210 cm-1 to 1360 cm-1 including CH4 ν4 band. The current retrieval algorithm (V1.0) uses LBLRTM V12.1 with AER V3.1 line database to calculate optical depth. LBLRTM V12.1 include MT_CKD 2.5.2 model to calculate continuum absorption. The continuum absorption has large uncertainty, especially temperature dependent coefficient, between BPS model and MT_CKD model in the wavenumber region of 1210-1250 cm-1(Paynter and Ramaswamy, 2014). The purpose of this study is to assess the impact on CH4 retrieval from the line parameter databases and the uncertainty of continuum absorption. We used AER v1.0 database, HITRAN2004 database, HITRAN2008 database, AER V3.2 database, and HITRAN2012 database (Rothman et al. 2005, 2009, and 2013. Clough et al., 2005). AER V1.0 database is based on HITRAN2000. The CH4 line parameters of AER V3.1 and V3.2 databases are developed from HITRAN2008 including updates until May 2009 with line mixing parameters. We compared the retrieved CH4 with the HIPPO CH4 observation (Wofsy et al., 2012). The difference of AER V3.2 was the smallest and 24.1 ± 45.9 ppbv. The differences of AER V1.0, HITRAN2004, HITRAN2008, and HITRAN2012 were 35.6 ± 46.5 ppbv, 37.6 ± 46.3 ppbv, 32.1 ± 46.1 ppbv, and 35.2 ± 46.0 ppbv, respectively. Compare AER V3.2 case to HITRAN2008 case, the line coupling effect reduced difference by 8.0 ppbv. Median values of Residual difference from HITRAN2008 to AER V1.0, HITRAN2004, AER V3.2, and HITRAN2012 were 0.6 K, 0.1 K, -0.08 K, and 0.08 K, respectively, while median values of transmittance difference were less than 0.0003 and transmittance differences have small wavenumber dependence. We also discuss the retrieval error from the uncertainty of the continuum absorption, the test of full grid

  17. Water in star-forming regions with Herschel (WISH) : IV. A survey of low-J H2O line profiles toward high-mass protostars

    NARCIS (Netherlands)

    van der Tak, F. F. S.; Chavarria, L.; Herpin, F.; Wyrowski, F.; Walmsley, C. M.; van Dishoeck, E. F.; Benz, A. O.; Bergin, E. A.; Caselli, P.; Hogerheijde, M. R.; Johnstone, D.; Kristensen, L. E.; Liseau, R.; Nisini, B.; Tafalla, M.

    Context. Water is a key constituent of star-forming matter, but the origin of its line emission and absorption during high-mass star formation is not well understood. Aims. We study the velocity profiles of low-excitation H2O lines toward 19 high-mass star-forming regions and search for trends with

  18. On the effects of rotation on interstellar molecular line profiles

    International Nuclear Information System (INIS)

    Adelson, L.M.; Chunming Leung

    1988-01-01

    Theoretical models are constructed to study the effects of systematic gas rotation on the emergent profiles of interstellar molecular lines, in particular the effects of optical depth and different velocity laws. Both rotational and radial motions (expansion or contraction) may produce similar asymmetric profiles, but the behaviour of the velocity centroid of the emergent profile over the whole cloud (iso-centroid maps) can be used to distinguish between these motions. Iso-centroid maps can also be used to determine the location and orientation of the rotation axis and of the equatorial axis. For clouds undergoing both radial and rotational motion, the component of the centroid due to the rotational motion can be separated from that due to the radial motion. Information on the form of the rotational velocity law can also be derived. (author)

  19. Semi-analytical model of laser resonance absorption in plasmas with a parabolic density profile

    International Nuclear Information System (INIS)

    Pestehe, S J; Mohammadnejad, M

    2010-01-01

    Analytical expressions for mode conversion and resonance absorption of electromagnetic waves in inhomogeneous, unmagnetized plasmas are required for laboratory and simulation studies. Although most of the analyses of this problem have concentrated on the linear plasma density profile, there are a few research works that deal with different plasma density profiles including the parabolic profile. Almost none of them could give clear analytical formulae for the electric and magnetic components of the electromagnetic field propagating through inhomogeneous plasmas. In this paper, we have considered the resonant absorption of laser light near the critical density of plasmas with parabolic electron density profiles followed by a uniform over-dense region and have obtained expressions for the electric and magnetic vectors of laser light propagating through the plasma. An estimation of the fractional absorption of laser energy has also been carried out. It has been shown that, in contrast to the linear density profile, the energy absorption depends explicitly on the value of collision frequency as well as on a new parameter, N, called the over-dense density order.

  20. Line strengths, A-factors and absorption cross-sections for fine structure lines in multiplets and hyperfine structure components in lines in atomic spectrometry - a user's guide

    International Nuclear Information System (INIS)

    Axner, Ove; Gustafsson, Joergen; Omenetto, Nicolo; Winefordner, James D.

    2004-01-01

    This work summarizes and elucidates a number of fundamental concepts in atomic spectrometry regarding the 'strengths' of transitions between various energy levels and states in atoms. Although several of the expressions and rules for line strengths of transitions reported here can be found, in one way or another, in various books dealing with atomic structure, atomic spectrometry or quantum mechanics, the treatment in such books can be variously complex and difficult to follow for a non-experienced reader. In addition, detailed information about transition-specific 'strengths' of transitions used to be restricted to line strengths, whereas most experiments rather need transition-specific A-factors or transition-specific absorption cross-sections. This work therefore aims at pointing out the most important aspects of the concept of 'strengths' of transitions between various energy levels and states in atoms by presenting explicit expressions for not only relative and absolute line strengths but also oscillator strengths (f-values), A-factors and absorption cross-sections, for transitions between fine structure levels within a multiplet as well as for hyperfine structure components within a line (i.e. between hyperfine structure levels), including their mutual relations, in a consistent and user-friendly manner. The work also recapitulates the most important summation rules for line strengths, oscillator strengths (f-values), A-factors and absorption cross-sections for lines within multiplets and hyperfine structure components within lines. Many of the expressions are illustrated with clear and intelligible examples. For the sake of clarity and completeness, the work also comprises a short review of the nomenclature for atomic structure and transitions

  1. Search for gravitational redshifted absorption lines in LMXB Serpens X-1

    Science.gov (United States)

    Yoneda, Hiroki; Done, Chris; Paerels, Frits; Takahashi, Tadayuki; Watanabe, Shin

    2018-04-01

    The equation of state for ultradense matter can be tested from observations of the ratio of mass to radius of neutron stars. This could be measured precisely from the redshift of a narrow line produced on the surface. X-rays bursts have been intensively searched for such features, but so far without detection. Here instead we search for redshifted lines in the persistent emission, where the accretion flow dominates over the surface emission. We discuss the requirements for narrow lines to be produced, and show that narrow absorption lines from highly ionized iron can potentially be observable in accreting low-mass X-ray binaries (LMXBs; low B field) that have either low spin or low inclination so that Doppler broadening is small. This selects Serpens X-1 as the only potential candidate persistent LMXB due to its low inclination. Including surface models in the broad-band accretion flow model predicts that the absorption line from He-like iron at 6.7 keV should be redshifted to ˜5.1-5.7 keV (10-15 km for 1.4 M⊙) and have an equivalent width of 0.8-8 eV for surface temperatures of 7-10 × 106 K. We use the high-resolution Chandra grating data to give a firm upper limit of 2-3 eV for an absorption line at ˜5 keV. We discuss possible reasons for this lack of detection (the surface temperature and the geometry of the boundary layer etc.). Future instruments with better sensitivity are required in order to explore the existence of such features.

  2. Evaluation of self-absorption coefficients of aluminum emission lines in laser-induced breakdown spectroscopy measurements

    International Nuclear Information System (INIS)

    El Sherbini, A.M.; El Sherbini, Th.M.; Hegazy, H.; Cristoforetti, G.; Legnaioli, S.; Palleschi, V.; Pardini, L.; Salvetti, A.; Tognoni, E.

    2005-01-01

    In quantitative Laser Induced Breakdown Spectroscopy (LIBS) measurements it is essential to account for the effect of self-absorption on the emission lines intensity. In order to quantify this effect, in this paper we propose a simple method for evaluating the ratio between the actual measured line intensity and the intensity expected in absence of self-absorption and, if necessary, correcting the effect of self-absorption on line intensity. The method, based on a homogeneous plasma model, is applicable when the plasma electron density is known and in particular to lines whose Stark broadening parameter is available

  3. Neutral atomic absorption lines and far-UV extinction: Possible implications for depletions and grain parameters

    Science.gov (United States)

    Welty, Daniel E.

    1990-01-01

    Researchers examine nine lines of sight within the Galaxy and one in the Large Magellanic Cloud (LMC) for which data on both neutral atomic absorption lines (Snow 1984; White 1986; Welty, Hobbs, and York 1989) and far UV extinction (Bless and Savage 1972; Jenkins, Savage, and Spitzer 1986) are available, in order to test the assumption that variations in gamma/alpha will cancel in taking ratios of the ionization balance equation, and to try to determine to what extent that assumption has affected the aforementioned studies of depletions and grain properties.

  4. The spatial and kinematic structure of QSO metal-line absorption systems

    Science.gov (United States)

    Lanzetta, Kenneth M.

    1992-01-01

    Recent attempts to infer the spatial and kinematic distributions of the material responsible for absorption lines observed in the spectra of background QSOs are presented. Current models of the absorbing regions are compared, and initial observational results are described. This research is expected to lead eventually to a detailed picture of the extended gaseous halo regions of galaxies at early evolutionary stages and to an understanding of the physical processes at work in these halos.

  5. UV spectroscopy including ISM line absorption: of the exciting star of Abell 35

    Science.gov (United States)

    Ziegler, M.; Rauch, T.; Werner, K.; Kruk, J. W.

    Reliable spectral analysis that is based on high-resolution UV observations requires an adequate, simultaneous modeling of the interstellar line absorption and reddening. In the case of the central star of the planetary nebula Abell 35, BD-22 3467, we demonstrate our current standard spectral-analysis method that is based on the Tübingen NLTE Model-Atmosphere Package (TMAP). We present an on- going spectral analysis of FUSE and HST/STIS observations of BD-22 3467.

  6. Observations of absorption lines from highly ionized atoms. [of interstellar medium

    Science.gov (United States)

    Jenkins, Edward B.

    1987-01-01

    In the ultraviolet spectra of hot stars, absorption lines can be seen from highly ionized species in the interstellar medium. Observations of these features which have been very influential in revising the perception of the medium's various physical states, are discussed. The pervasiveness of O 6 absorption lines, coupled with complementary observations of a diffuse background in soft X-rays and EUV radiation, shows that there is an extensive network of low density gas (n approx. few x 0.001/cu cm) existing at coronal temperatures log T = 5.3 or 6.3. Shocks created by supernova explosions or mass loss from early-type stars can propagate freely through space and eventually transfer a large amount of energy to the medium. To create the coronal temperatures, the shocks must have velocities in excess of 150 km/sec; shocks at somewhat lower velocity (v = 100 km/sec) can be directly observed in the lines of Si3. Observations of other lines in the ultraviolet, such as Si 4V and C 5, may highlight the widespread presence of energetic UV radiation from very hot, dwarf stars. More advanced techniques in visible and X-ray astronomical spectroscopy may open up for inspection selected lines from atoms in much higher stages of ionization.

  7. Wavelength Locking to CO2 Absorption Line-Center for 2-Micron Pulsed IPDA Lidar Application

    Science.gov (United States)

    Refaat, Tamer F.; Petros, Mulugeta; Antill, Charles W.; Singh, Upendra N.; Yu, Jirong

    2016-01-01

    An airborne 2-micron triple-pulse integrated path differential absorption (IPDA) lidar is currently under development at NASA Langley Research Center (LaRC). This IPDA lidar system targets both atmospheric carbon dioxide (CO2) and water vapor (H2O) column measurements. Independent wavelength control of each of the transmitted laser pulses is a key feature for the success of this instrument. The wavelength control unit provides switching, tuning and locking for each pulse in reference to a 2-micron CW (Continuous Wave) laser source locked to CO2 line-center. Targeting the CO2 R30 line center, at 2050.967 nanometers, a wavelength locking unit has been integrated using semiconductor laser diode. The CO2 center-line locking unit includes a laser diode current driver, temperature controller, center-line locking controller and CO2 absorption cell. This paper presents the CO2 center-line locking unit architecture, characterization procedure and results. Assessment of wavelength jitter on the IPDA measurement error will also be addressed by comparison to the system design.

  8. Transient C IV broad absorption lines in radio-detected QSOs

    Science.gov (United States)

    Vivek, M.; Srianand, R.; Gupta, N.

    2016-01-01

    We study the transient (I.e. emerging or disappearing) C IV broad absorption line (BAL) components in 50 radio-detected QSOs using multi-epoch spectra available in Sloan Digital Sky Survey Data Release-10. We report the detection of six BALQSOs having at least one distinct transient C IV absorption component. Based on the structure function analysis of optical light curves, we suggest that the transient absorption is unlikely to be triggered by continuum variations. Transient absorption components usually have low C IV equivalent widths (10 000 km s-1) and typically occur over rest-frame time-scales >800 d. The detection rate of transient C IV absorption seen in our sample is higher than that reported in the literature. Using a control sample of QSOs, we show that this difference is most likely due to the longer monitoring time-scale of sources in our sample while the effect of small number statistics cannot be ignored. Thus, in order to establish the role played by radio jets in driving the BAL outflows, we need a larger sample of radio-detected BALs monitored over more than 3 yr in the QSO's rest frame. We also find that the transient phenomenon in radio-detected and radio-quiet BALs does not depend on any of the QSO properties, I.e. the Eddington ratio, black hole mass, bolometric luminosity and optical-to-IR colours. All this suggests that transient BAL phenomenon is simply the extreme case of BAL variability.

  9. Atomic Data Revisions for Improving Absorption Line Studies of the Interstellar, Circumgalactic, and Intergalactic Medium

    Science.gov (United States)

    Cashman, Frances; Kulkarni, Varsha; Kisielius, Romas; Ferland, Gary; Bogdanovich, Pavel

    2018-01-01

    Surveying and studying galaxies at different epochs is essential to understanding how galaxies evolve. Atomic spectroscopy is used to study the gas in and around galaxies by means of the absorption features in the spectra of background quasars. Element abundances derived from the measurement of observed lines in these quasar absorption systems rely on accurate atomic data such as the oscillator strength of electric dipole transitions. We have produced a compilation of recommended oscillator strengths for 576 key transitions for wavelengths longward of 911.753 Angstroms (the H I Lyman limit). This compilation focuses on the recent findings from numerous theoretical and experimental physicists for ions of astrophysical interest that have been observed in the interstellar medium (ISM), the circumgalactic medium (CGM), and the intergalactic medium (IGM), for selected elements ranging from C to Pb. Differences between the former and the newly recommended values are greater than 25% for approximately 22% of lines with updated oscillator strength values. We encourage future absorption line studies of the ISM, CGM, and IGM medium to use this compilation.This work was supported in part by NSF-AST/1108830, NASA/STScI support for HST GO-12536, and a NASA/SC Space Grant graduate fellowship.

  10. Energy absorption and hardness of chair-side denture soft lining materials.

    Science.gov (United States)

    Tasopoulos, Theodorus; Jagger, Robert G; Jagger, Daryll C; Griffiths, Alex E

    2010-12-01

    The purpose of this study was to evaluate the hardness and energy absorption properties of four commercially available chairside silicone denture soft lining materials and to compare their properties with those of a heat-polymerized silicone denture liner. The denture lining materials investigated were four auto-polymerising silicone soft liners (GC Reline Soft, Ufigel SC, Elite Soft Relining and Tokuyama Sofreliner S) and a heat-polymerised silicone liner (Molloplast B). The soft liners were processed according to manufacturers' instructions. The specimens for hardness testing were 38 x 38 x 3 mm. The specimens for energy absorption test were 10 x 10 x 3 mm. In each test ten samples of each material were tested. There was strong evidence that Tokuyama Sofreliner S and, to a lesser extent, Ufigel SC, were less stiff and more resilient than Molloplast B. There was also strong evidence that both GC Reline Soft and Elite Soft Relining were harder than Molloplast B, while Ufigel SC and Tokuyama Sofreliner S were softer In conclusion differences existed between hardness and energy absorption properties of the soft lining materials.

  11. X-ray-selected broad absorption line quasi-stellar objects

    Science.gov (United States)

    Page, M. J.; Carrera, F. J.; Ceballos, M.; Corral, A.; Ebrero, J.; Esquej, P.; Krumpe, M.; Mateos, S.; Rosen, S.; Schwope, A.; Streblyanska, A.; Symeonidis, M.; Tedds, J. A.; Watson, M. G.

    2017-02-01

    We study a sample of six X-ray-selected broad absorption line (BAL) quasi-stellar objects (QSOs) from the XMM-Newton Wide Angle Survey. All six objects are classified as BALQSOs using the classic balnicity index, and together they form the largest sample of X-ray-selected BALQSOs. We find evidence for absorption in the X-ray spectra of all six objects. An ionized absorption model applied to an X-ray spectral shape that would be typical for non-BAL QSOs (a power law with energy index α = 0.98) provides acceptable fits to the X-ray spectra of all six objects. The optical to X-ray spectral indices, αOX, of the X-ray-selected BALQSOs, have a mean value of = 1.69 ± 0.05, which is similar to that found for X-ray-selected and optically selected non-BAL QSOs of a similar ultraviolet luminosity. In contrast, optically selected BALQSOs typically have much larger αOX and so are characterized as being X-ray weak. The results imply that X-ray selection yields intrinsically X-ray bright BALQSOs, but their X-ray spectra are absorbed by a similar degree to that seen in optically selected BALQSO samples; X-ray absorption appears to be ubiquitous in BALQSOs, but X-ray weakness is not. We argue that BALQSOs sit at one end of a spectrum of X-ray absorption properties in QSOs related to the degree of ultraviolet absorption in C IV 1550 Å.

  12. High-resolution H-band spectroscopy of Be stars with SDSS-III/apogee. I. New Be stars, line identifications, and line profiles

    International Nuclear Information System (INIS)

    Chojnowski, S. Drew; Majewski, Steven R.; Hall, Matthew; Beaton, Rachael; Burton, Adam; Damke, Guillermo; Wilson, John; Whelan, David G.; Wisniewski, John P.; Shetrone, Matthew; Eikenberry, Steve; Hasselquist, Sten; Holtzman, Jon A.; Brewington, Howard; Brinkmann, J.; Mészáros, Szabolcs; Nidever, David; Schneider, Donald P.; Zasowski, Gail; Bizyaev, Dmitry

    2015-01-01

    The Apache Point Observatory Galactic Evolution Experiment (APOGEE) has amassed the largest ever collection of multi-epoch, high-resolution (R∼22,500), H-band spectra for B-type emission line (Be) stars. These stars were targeted by APOGEE as telluric standard stars and subsequently identified via visual inspection as Be stars based on H i Brackett series emission or shell absorption in addition to otherwise smooth continua and occasionally non-hydrogen emission features. The 128/238 APOGEE Be stars for which emission had never previously been reported serve to increase the total number of known Be stars by ∼6%. Because the H band is relatively unexplored compared to other wavelength regimes, we focus here on identification of the H-band lines and analysis of the emission peak velocity separations (Δv p ) and emission peak intensity ratios (V/R) of the usually double-peaked H i and non-hydrogen emission lines. H i Br11 emission is found to preferentially form in the circumstellar disks at an average distance of ∼2.2 stellar radii. Increasing Δv p toward the weaker Br12–Br20 lines suggests these lines are formed interior to Br11. By contrast, the observed IR Fe ii emission lines present evidence of having significantly larger formation radii; distinctive phase lags between IR Fe ii and H i Brackett emission lines further supports that these species arise from different radii in Be disks. Several emission lines have been identified for the first time including C i 16895, a prominent feature in the spectra for almost a fifth of the sample and, as inferred from relatively large Δv p compared to the Br11–Br20, a tracer of the inner regions of Be disks. Emission lines at 15760 Å and 16781 Å remain unidentified, but usually appear along with and always have similar line profile morphology to Fe ii 16878. Unlike the typical metallic lines observed for Be stars in the optical, the H-band metallic lines, such as Fe ii 16878, never exhibit any evidence of

  13. Recovering the systemic redshift of galaxies from their Lyman-alpha line profile

    Science.gov (United States)

    Verhamme, A.; Garel, T.; Ventou, E.; Contini, T.; Bouché, N.; Herenz, E. C.; Richard, J.; Bacon, R.; Schmidt, K. B.; Maseda, M.; Marino, R. A.; Brinchmann, J.; Cantalupo, S.; Caruana, J.; Clément, B.; Diener, C.; Drake, A. B.; Hashimoto, T.; Inami, H.; Kerutt, J.; Kollatschny, W.; Leclercq, F.; Patrício, V.; Schaye, J.; Wisotzki, L.; Zabl, J.

    2018-04-01

    The Lyman alpha (Lyα) line of Hydrogen is a prominent feature in the spectra of star-forming galaxies, usually redshifted by a few hundreds of km s-1 compared to the systemic redshift. This large offset hampers follow-up surveys, galaxy pair statistics and correlations with quasar absorption lines when only Lyα is available. We propose diagnostics that can be used to recover the systemic redshift directly from the properties of the Lyα line profile. We use spectroscopic observations of Lyman-Alpha Emitters (LAEs) for which a precise measurement of the systemic redshift is available. Our sample contains 13 sources detected between z ≈ 3 and z ≈ 6 as part of various Multi Unit Spectroscopic Explorer (MUSE) Guaranteed Time Observations (GTO). We also include a compilation of spectroscopic Lyα data from the literature spanning a wide redshift range (z ≈ 0 - 8). First, restricting our analysis to double-peaked Lyα spectra, we find a tight correlation between the velocity offset of the red peak with respect to the systemic redshift, V_peak^red, and the separation of the peaks. Secondly, we find a correlation between V_peak^red and the full width at half maximum of the Lyα line. Fitting formulas, to estimate systemic redshifts of galaxies with an accuracy of ≤100 km s-1 when only the Lyα emission line is available, are given for the two methods.

  14. Intersstellar absorption lines between 2000 and 3000 A in nearby stars observed with BUSS. [Balloon Borne Ultraviolet Spectrophotometer

    Science.gov (United States)

    De Boer, K. S.; Lenhart, H.; Van Der Hucht, K. A.; Kamperman, T. M.; Kondo, Y.

    1986-01-01

    Spectra obtained between 2000 and 3000 A with the Balloon Borne Ultraviolet Spectrophotometer (BUSS) payload were examined for interstellar absorption lines. In bright stars, with spectral types between O9V and F5V, such lines were measured of Mg I, Mg II, Cr II, Mn II, Fe II and Zn II, with Cr II and Zn II data of especially high quality. Column densities were derived and interstellar abundances were determined for the above species. It was found that metal depletion increases with increasing E(B-V); Fe was most affected and Zn showed a small depletion for E(B-V) greater than 0.3 towards Sco-Oph. The metal column densities, derived for Alpha-And, Kappa-Dra, Alpha-Com, Alpha-Aql, and 29 Cyg were used to infer N(H I). It was shown that the ratio of Mg I to Na I is instrumental in determining the ionization structure along each line of sight. The spectra of Aql stars confirms the presence of large gas densities near Alpha-Oph. Moreover, data indicated that the Rho-Oph N(H I) value needs to be altered to 35 x 10 to the 20th/sq cm, based on observed ion ratios and analysis of the Copernicus L-alpha profile.

  15. Profiling biopharmaceutical deciding properties of absorption of lansoprazole enteric-coated tablets using gastrointestinal simulation technology.

    Science.gov (United States)

    Wu, Chunnuan; Sun, Le; Sun, Jin; Yang, Yajun; Ren, Congcong; Ai, Xiaoyu; Lian, He; He, Zhonggui

    2013-09-10

    The aim of the present study was to correlate in vitro properties of drug formulation to its in vivo performance, and to elucidate the deciding properties of oral absorption. Gastrointestinal simulation technology (GST) was used to simulate the in vivo plasma concentration-time curve and was implemented by GastroPlus™ software. Lansoprazole, a typical BCS class II drug, was chosen as a model drug. Firstly, physicochemical and pharmacokinetic parameters of lansoprazole were determined or collected from literature to construct the model. Validation of the developed model was performed by comparison of the predicted and the experimental plasma concentration data. We found that the predicted curve was in a good agreement with the experimental data. Then, parameter sensitivity analysis (PSA) was performed to find the key parameters of oral absorption. The absorption was particularly sensitive to dose, solubility and particle size for lansoprazole enteric-coated tablets. With a single dose of 30 mg and the solubility of 0.04 mg/ml, the absorption was complete. A good absorption could be achieved with lansoprazole particle radius down to about 25 μm. In summary, GST is a useful tool for profiling biopharmaceutical deciding properties of absorption of lansoprazole enteric-coated tablets and guiding the formulation optimization. Crown Copyright © 2013. Published by Elsevier B.V. All rights reserved.

  16. Infrared Spectroscopy of CO Ro-Vibrational Absorption Lines toward the Obscured AGN IRAS 08572+3915

    Science.gov (United States)

    Shirahata, Mai; Nakagawa, Takao; Usuda, Tomonori; Goto, Miwa; Suto, Hiroshi; Geballe, Thomas R.

    2013-02-01

    We present high-resolution spectroscopy of gaseous CO absorption in the fundamental ro-vibrational band toward the heavily obscured active galactic nucleus (AGN) IRAS 08572+3915. We have detected absorption lines up to highly excited rotational levels (J ≤ 17). The velocity profiles reveal three distinct components, the strongest and broadest (Δυ > 200 km s-1) of which is due to blueshifted (-160 km s-1) gas at a temperature of ˜270 K absorbing at velocities as high as -400 km s-1. A much weaker but even warmer (˜700 K) component, which is highly redshifted (+100 km s-1), is also detected, in addition to a cold (˜20 K) component centered at the systemic velocity of the galaxy. On the assumption of local thermodynamic equilibrium, the column density of CO in the 270 K component is NCO ˜4.5 × 1018 cm-2, which in fully molecular gas corresponds to an H2 column density of NH2 ˜ 2.5 × 1022 cm-2. The thermal excitation of CO up to the observed high rotational levels requires a density greater than nc (H2) > 2 × 107cm-3, implying that the thickness of the warm absorbing layer is extremely small (Δd warm components, as well as their temperatures, indicate that they originate in molecular clouds near the central engine of the AGN.

  17. THE SLOAN DIGITAL SKY SURVEY REVERBERATION MAPPING PROJECT: RAPID C iv BROAD ABSORPTION LINE VARIABILITY

    Energy Technology Data Exchange (ETDEWEB)

    Grier, C. J.; Brandt, W. N.; Trump, J. R.; Schneider, D. P. [Department of Astronomy and Astrophysics and Institute for Gravitation and the Cosmos, The Pennsylvania State University, 525 Davey Laboratory, University Park, PA 16802 (United States); Hall, P. B. [Department of Physics and Astronomy, York University, Toronto, ON M3J 1P3 (Canada); Shen, Yue [Carnegie Observatories, 813 Santa Barbara Street, Pasadena, CA 91101 (United States); Vivek, M.; Dawson, K. S. [Department of Physics and Astronomy, University of Utah, Salt Lake City, UT 84112 (United States); Ak, N. Filiz [Faculty of Sciences, Department of Astronomy and Space Sciences, Erciyes University, 38039 Kayseri (Turkey); Chen, Yuguang [Department of Astronomy, School of Physics, Peking University, Beijing 100871 (China); Denney, K. D.; Kochanek, C. S.; Peterson, B. M. [Department of Astronomy, The Ohio State University, 140 West 18th Avenue, Columbus, OH 43210 (United States); Green, Paul J. [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, Cambridge, MA 02138 (United States); Jiang, Linhua [Kavli Institute for Astronomy and Astrophysics, Peking University, Beijing 100871 (China); McGreer, Ian D. [Steward Observatory, The University of Arizona, 933 North Cherry Avenue, Tucson, AZ 85721-0065 (United States); Pâris, I. [INAF-Osservatorio Astronomico di Trieste, Via G. B. Tiepolo 11, I-34131 Trieste (Italy); Tao, Charling [Centre de Physique des Particules de Marseille, Aix-Marseille Universite, CNRS /IN2P3, 163, avenue de Luminy, Case 902, F-13288 Marseille Cedex 09 (France); Wood-Vasey, W. M. [PITT PACC, Department of Physics and Astronomy, University of Pittsburgh, 3941 O’Hara Street, Pittsburgh, PA 15260 (United States); Bizyaev, Dmitry, E-mail: grier@psu.edu [Apache Point Observatory and New Mexico State University, P.O. Box 59, Sunspot, NM, 88349-0059 (United States); and others

    2015-06-10

    We report the discovery of rapid variations of a high-velocity C iv broad absorption line trough in the quasar SDSS J141007.74+541203.3. This object was intensively observed in 2014 as a part of the Sloan Digital Sky Survey Reverberation Mapping Project, during which 32 epochs of spectroscopy were obtained with the Baryon Oscillation Spectroscopic Survey spectrograph. We observe significant (>4σ) variability in the equivalent width (EW) of the broad (∼4000 km s{sup −1} wide) C iv trough on rest-frame timescales as short as 1.20 days (∼29 hr), the shortest broad absorption line variability timescale yet reported. The EW varied by ∼10% on these short timescales, and by about a factor of two over the duration of the campaign. We evaluate several potential causes of the variability, concluding that the most likely cause is a rapid response to changes in the incident ionizing continuum. If the outflow is at a radius where the recombination rate is higher than the ionization rate, the timescale of variability places a lower limit on the density of the absorbing gas of n{sub e} ≳ 3.9 × 10{sup 5} cm{sup −3}. The broad absorption line variability characteristics of this quasar are consistent with those observed in previous studies of quasars, indicating that such short-term variability may in fact be common and thus can be used to learn about outflow characteristics and contributions to quasar/host-galaxy feedback scenarios.

  18. Chirped pulse generation of a narrow absorption line in a Tm 3+:YAG crystal

    Science.gov (United States)

    de Sèze, F.; Lavielle, V.; Lorgeré, I.; Le Gouët, J.-L.

    2003-08-01

    We examine the coherent aspects of the swept CW laser spectral hole burning procedure, exploring their connection with rapid adiabatic passage (RAP). We take advantage of the well-known RAP robustness against control parameter variations. Considering uniform excitation of all the absorbing centers over a given spectral range, we propose a new scheme to exclude a single-frequency subset of centers from excitation. As the excited centers decay to a shelving state, one is left with nothing but the subset of unexcited centers that will behave like a narrow absorption line sample. Preliminary experimental results are presented.

  19. On-line determination of manganese in solid seafood samples by flame atomic absorption spectrometry

    International Nuclear Information System (INIS)

    Yebra, M.C.; Moreno-Cid, A.

    2003-01-01

    Manganese is extracted on-line from solid seafood samples by a simple continuous ultrasound-assisted extraction system (CUES). This system is connected to an on-line manifold, which permits the flow-injection flame atomic absorption spectrometric determination of manganese. Optimisation of the continuous leaching procedure is performed by an experimental design. The proposed method allows the determination of manganese with a relative standard deviation of 0.9% for a sample containing 23.4 μg g -1 manganese (dry mass). The detection limit is 0.4 μg g -1 (dry mass) for 30 mg of sample and the sample throughput is ca. 60 samples per hour. Accurate results are obtained by measuring TORT-1 certified reference material. The procedure is finally applied to mussel, tuna, sardine and clams samples

  20. Line Profile Measurements of the Lunar Exospheric Sodium

    Science.gov (United States)

    Oliversen, Ronald J.; Mierkiewicz, Edwin J.; Line, Michael R.; Roesler, Fred L.; Lupie, Olivia L.

    2012-01-01

    We report ongoing results of a program to measure the lunar sodium exospheric line profile from near the lunar limb out to two lunar radii (approx 3500 km). These observations are conducted from the National Solar Observatory McMath-Pierce telescope using a dual-etalon Fabry-Perot spectrometer with a resolving power of 180,600 (1.7 km/s) to measure line widths and velocity shifts of the Na D2 (5889 950 A) emission line in equatorial and polar regions at different lunar phases. The typical field of view (FOV) is 3 arcmin (approx 360 km) with an occasional smaller 1 arcmin FOV used right at the limb edge. The first data were obtained from full Moon to 3 days following full Moon (waning phase) in March 2009 as part of a demonstration run aimed at establishing techniques for a thorough study of temperatures and velocity variations in the lunar sodium exosphere. These data indicate velocity displacements from different locations off the lunar limb range between 150 and 600 m/s from the lunar rest velocity with a precision of +/- 20 to +/- 50 m/s depending on brightness. The measured Doppler line widths for observations within 10.5 arcmin of the east and south lunar limbs for observations between 5 deg and 40 deg lunar phase imply temperatures ranging decreasing from 3250 +/- 260K to 1175 +/- 150K. Additional data is now being collected on a quarterly basis since March 2011 and preliminary results will be reported.

  1. Differential absorption lidars for remote sensing of atmospheric pressure and temperature profiles

    Science.gov (United States)

    Korb, C. Laurence; Schwemmer, Geary K.; Famiglietti, Joseph; Walden, Harvey; Prasad, Coorg

    1995-01-01

    A near infrared differential absorption lidar technique is developed using atmospheric oxygen as a tracer for high resolution vertical profiles of pressure and temperature with high accuracy. Solid-state tunable lasers and high-resolution spectrum analyzers are developed to carry out ground-based and airborne measurement demonstrations and results of the measurements presented. Numerical error analysis of high-altitude airborne and spaceborne experiments is carried out, and system concepts developed for their implementation.

  2. XMM-Newton Spectroscopy of the X-ray Detected Broad Absorption Line QSO CSO 755

    Science.gov (United States)

    Brandt, Niel

    2005-01-01

    We present the results from XMM-Newton observations of the highly optically polarized broad absorption line quasar (BALQSO) CSO 755. By analyzing its X-ray spectrum with a total of approximately 3000 photons we find that this source has an X-ray continuum of "typical" radio-quiet quasars, with a photon index of Gamma=1.83, and a rather flat (X-ray bright) intrinsic optical-to-X-ray spectral slope of alpha_ox=- 1.51. The source shows evidence for intrinsic absorption, and fitting the spectrum with a neutral-absorption model gives a column density of N_H approximately 1.2x10^22 cm^{-2}; this is among the lowest X-ray columns measured for BALQSOs. We do not detect, with high significance, any other absorption features in the X-ray spectrum. Upper limits we place on the rest-frame equivalent width of a neutral (ionized) Fe K-alpha line, less than =180 eV (less than =120 eV), and on the Compton-reflection component parameter, R less than =0.2, suggest that most of the X-rays from the source are directly observed rather than being scattered or reflected; this is also supported by the relatively flat intrinsic alpha ox we measure. The possibility that most of the X-ray flux is scattered due to the high level of UV-optical polarization is ruled out. Considering data for 46 BALQSOs from the literature, including CSO 755, we have found that the UV-optical continuum polarization level of BALQSOs is not correlated with any of their X-ray properties. A lack of significant short-term and long-term X-ray flux variations in the source may be attributed to a large black-hole mass in CSO 755. We note that another luminous BALQSO, PG 2112+059, has both similar shallow C IV BALs and moderate X-ray absorption.

  3. Water-vapor absorption line measurements in the 940-nm band by using a Raman-shifted dye laser

    Science.gov (United States)

    Chu, Zhiping; Wilkerson, Thomas D.; Singh, Upendra N.

    1993-01-01

    We report water-vapor absorption line measurements that are made by using the first Stokes radiation (930-982 nm) with HWHM 0.015/cm generated by a narrow-linewidth, tunable dye laser. Forty-five absorption line strengths are measured with an uncertainty of 6 percent and among them are fourteen strong lines that are compared with previous measurements for the assessment of spectral purity of the light source. Thirty air-broadened linewidths are measured with 8 percent uncertainty at ambient atmospheric pressure with an average of 0.101/cm. The lines are selected for the purpose of temperature-sensitive or temperature-insensitive lidar measurements. Results for these line strengths and linewidths are corrected for broadband radiation and finite laser linewidth broadening effects and compared with the high-resolution transmission molecular absorption.

  4. Early pharmaceutical profiling to predict oral drug absorption: current status and unmet needs.

    Science.gov (United States)

    Bergström, Christel A S; Holm, René; Jørgensen, Søren Astrup; Andersson, Sara B E; Artursson, Per; Beato, Stefania; Borde, Anders; Box, Karl; Brewster, Marcus; Dressman, Jennifer; Feng, Kung-I; Halbert, Gavin; Kostewicz, Edmund; McAllister, Mark; Muenster, Uwe; Thinnes, Julian; Taylor, Robert; Mullertz, Anette

    2014-06-16

    Preformulation measurements are used to estimate the fraction absorbed in vivo for orally administered compounds and thereby allow an early evaluation of the need for enabling formulations. As part of the Oral Biopharmaceutical Tools (OrBiTo) project, this review provides a summary of the pharmaceutical profiling methods available, with focus on in silico and in vitro models typically used to forecast active pharmaceutical ingredient's (APIs) in vivo performance after oral administration. An overview of the composition of human, animal and simulated gastrointestinal (GI) fluids is provided and state-of-the art methodologies to study API properties impacting on oral absorption are reviewed. Assays performed during early development, i.e. physicochemical characterization, dissolution profiles under physiological conditions, permeability assays and the impact of excipients on these properties are discussed in detail and future demands on pharmaceutical profiling are identified. It is expected that innovative computational and experimental methods that better describe molecular processes involved in vivo during dissolution and absorption of APIs will be developed in the OrBiTo. These methods will provide early insights into successful pathways (medicinal chemistry or formulation strategy) and are anticipated to increase the number of new APIs with good oral absorption being discovered. Copyright © 2013 Elsevier B.V. All rights reserved.

  5. VizieR Online Data Catalog: Sgr B2 los molecular absorption line spectra (Corby+, 2018)

    Science.gov (United States)

    Corby, J. F.; McGuire, B. A.; Herbst, E.; Remijan, A. J.

    2017-11-01

    Spectra covering transitions of c-C3H2, c-H1 SO, CCS, H2CS, HCS+, OH, SiO, 29SiO, H2CO, H2(13C)O, l-C3H, and l-C3H+ with line-of-sight absorption observed in the 1-50 GHz data from the PRebiotic Interstellar MOlecular Survey (PRIMOS) taken with the Robert C. Byrd Green Bank Telescope (GBT). Data were observed between 2001 and 2014, with the majority of the data obtained in 2007 in GBT Key Science project ID GBT07A-051. Spectra have been baseline-subtracted using best fit polynomials as described in the paper, and normalized by the continuum, so that the y-axis represents (T/TC-1). Data are provided in the FITS format; each FITS file contains all lines of a single molecule that are observed to have foreground absorption. Please refer to Table 1 of the paper to obtain molecular transition rest frequencies, energies, GBT beam sizes, and transition quantum numbers. (2 data files).

  6. High-resolution spectroscopy for Cepheids distance determination. IV. Time series of Hα line profiles

    Science.gov (United States)

    Nardetto, N.; Groh, J. H.; Kraus, S.; Millour, F.; Gillet, D.

    2008-10-01

    Context: In recent years, infrared interferometry has revealed the presence of faint dusty circumstellar envelopes (CSE) around Cepheids. However the size, shape, chemical nature, and the interaction of the CSE with the star itself are still under investigation. The presence of a CSE might have an effect on the angular diameter estimates used in the interferometric Baade-Wesselink and surface-brightness methods of determining the distance of Cepheids. Aims: By studying Hα profiles as a function of the period, we investigate the permanent mass loss and the CSE around Cepheids. Our high spectral- and time-resolution data, combined with a very good S/N, will be useful in constraining future hydrodynamical models of Cepheids atmosphere and their close environment. Methods: We present HARPS (High Accuracy Radial velocity Planetary Search project developed by the European Southern Observatory.) high-resolution spectroscopy (R = 120 000) of eight galactic Cepheids: R Tra, S Cru, Y Sgr, β Dor, zeta Gem, RZ Vel, ell Car, and RS Pup, providing a good period sampling (P = 3.39 d to P = 41.52 d). The Hα line profiles are described for all stars using a 2D (wavelength versus pulsation phase) representation. For each star, an average spectral line profile is derived, together with its first moment (γ-velocity) and its asymmetry (γ-asymmetry). Results: Short-period Cepheids show Hα line profiles following the pulsating envelope of the star, while long-period Cepheids show very complex line profiles and, in particular, large asymmetries. We find a new relationship between the period of Cepheids and their γ-velocities and -asymmetries. These results may be related to the dynamical structure of the atmosphere and to a permanent mass loss of Cepheids. In particular, we confirm for ell Car a dominant absorption component whose velocity is constant and nearly of zero km s-1 in the stellar rest frame. This component is attributed to the presence of circumstellar envelope

  7. The SAURON project : XVII. Stellar population analysis of the absorption line strength maps of 48 early-type galaxies

    NARCIS (Netherlands)

    Kuntschner, Harald; Emsellem, Eric; Bacon, Roland; Cappellari, Michele; Davies, Roger L.; de Zeeuw, P. Tim; Falcon-Barroso, Jesus; Krajnovic, Davor; McDermid, Richard M.; Peletier, Reynier F.; Sarzi, Marc; Shapiro, Kristen L.; van den Bosch, Remco C. E.; van de Ven, Glenn; Krajnović, Davor

    2010-01-01

    We present a stellar population analysis of the absorption line strength maps for 48 early-type galaxies from the SAURON sample. Using the line strength index maps of H beta, Fe5015 and Mgb, measured in the Lick/IDS system and spatially binned to a constant signal-to-noise ratio, together with

  8. The SAURON project - XVII. Stellar population analysis of the absorption line strength maps of 48 early-type galaxies

    NARCIS (Netherlands)

    Kuntschner, Harald; Emsellem, Eric; Bacon, Roland; Cappellari, Michele; Davies, Roger L.; de Zeeuw, P. Tim; Falcón-Barroso, Jesús; Krajnović, Davor; McDermid, Richard M.; Peletier, Reynier F.; Sarzi, Marc; Shapiro, Kristen L.; van den Bosch, Remco C. E.; van de Ven, Glenn

    2010-01-01

    We present a stellar population analysis of the absorption line strength maps for 48 early-type galaxies from the SAURON sample. Using the line strength index maps of Hβ, Fe5015 and Mgb, measured in the Lick/IDS system and spatially binned to a constant signal-to-noise ratio, together with

  9. The velocity distribution of interstellar gas observed in strong UV absorption lines

    Science.gov (United States)

    Cowie, L. L.; York, D. G.

    1978-01-01

    Observations of three strong interstellar UV absorption lines of N I (1199 A), N II (1083 A), and Si III (1206 A) in 47 stars of widely varying distance and a variety of spectral types are analyzed to obtain a velocity distribution function for the interstellar gas. A technique based on the maximum and minimum velocities observed along a line of sight is adopted because of heavy line blending, and results are discussed for both power-law and exponential distribution functions. The expected distribution of radiative-phase supernova remnants (SNRs) in the interstellar medium is calculated as a function of SNR birthrate and of the interstellar density in which they evolve. The results are combined with observed distance estimates, and it is shown that an interstellar density in excess of 0.1 per cu cm would be required to keep the SNRs sufficiently confined so that their cross sections are consistent with the observed number of components. The alternative possibility is considered that SNRs do not enter the radiative phase before escaping from the Galaxy or colliding with neighboring remnants.

  10. Measurement and modeling of nitrogen resonance line profiles from an electrodeless discharge lamp

    International Nuclear Information System (INIS)

    Wood, D.R.; Skinner, G.B.; Lifshitz, A.

    1987-01-01

    Experimental profiles of the 1200 A resonance triplet of atomic nitrogen were measured for a variety of operating conditions of an end-on electrodeless lamp, and corresponding absorption curves were calculated. Each source profile was determined by fitting parameters to an empirical two-layer model, then convoluting with the instrumental function for comparison with experimental data. Each three-component profile was fitted with three adjustable parameters: an absorption parameter for each of the two layers and a third absorption parameter to adjust for radiation trapping. Curves of absorption as a function of atom concentration, calculated from these profiles, are very similar to the shock tube calibrations of Thielen and Roth in which a source of similar design has been used

  11. Stratospheric and Mesospheric Pressure-Temperature Profiles from the Rotational Analysis of CO subscript2 Lines

    Science.gov (United States)

    Gunson, M.; Lowes, L.; Abrams, M.; Raper, O.; Farmer, C.; Stiller, G.; Zander, R.; Rinsland, C.

    1994-01-01

    A simple, classical, and expedient method for the retrieval of atmospheric pressure-temperature profiles has been applied to the high-resolution infrared solar absorption spectra obtained with the Atmospheric Trace Molecule Spectroscopy (ATMOS) instrument.

  12. Metal Absorption Lines as Probes of the Intergalactic Medium Prior to the Reionization Epoch

    Science.gov (United States)

    Furlanetto, Steven R.; Loeb, Abraham

    2003-05-01

    Winds from star-forming galaxies provide the most promising explanation for the enrichment of the intergalactic medium with heavy elements. Theoretical and observational arguments indicate that the pollution may have occurred at z>~6 however, direct observational tests of such a scenario are needed. We model starburst winds in the high-redshift universe and find that the fraction of space filled by enriched material varies strongly with the assumed star formation efficiency f* and the fraction of supernova energy powering each wind fesc. We show that metals carried by these winds can be seen in absorption against bright background sources, such as quasars or gamma-ray bursts, in narrow lines with characteristic equivalent widths ~0.5Åcoolant in the early universe and to study the initial mass function of stars at high redshifts.

  13. Correlation between the variation of the ionizing continuum and broad absorption lines

    Science.gov (United States)

    Lu, Wei-Jian; Lin, Ying-Ru; Qin, Yi-Ping

    2018-01-01

    In this Letter, we present an analysis of the relation between the variability of broad absorption lines (BALs) and that of the continuum. Our sample is multi-epoch observations of 483 quasars by the Sloan Digital Sky Survey-I/II/III (SDSS-I/II/III). We derive the fractional flux variations of the continuum and fractional equivalent width (EW) variations for C IV and Si IV BALs, and explore the correlations between the three. Our results reveal moderate anticorrelations with high significance level between the fractional flux variations of the continuum and fractional EW variations for both C IV and Si IV BALs. We also prove a significant positive correlation between the fractional EW variations for C IV and Si IV BALs, which is in agreement with several previous studies. Our discoveries can serve as evidence for the idea: Change of an ionizing continuum is the primary driver of BAL variability.

  14. Testing Accretion Disk Wind Models of Broad Absorption Line Quasars with SDSS Spectra

    Science.gov (United States)

    Lindgren, Sean; Gabel, Jack

    2017-06-01

    We present an investigation of a large sample of broad absorption line (BAL) quasars (QSO) from the Sloan Digital Sky Survey (SDSS) Data Release 5 (DR5). Properties of the BALs, such as absorption equivalent width, outflow velocities, and depth of BAL, are obtained from analysis by Gibson et al. We perform correlation analysis on these data to test the predictions made by the radiation driven, accretion disk streamline model of Murray and Chiang. We find the CIV BAL maximum velocity and the continuum luminosity are correlated, consistent with radiation driven models. The mean minimum velocity of CIV is lower in low ionization BALs (LoBALs), than highly ionized BALs (HiBALS), suggesting an orientation effect consistent with the Murray and Chiang model. Finally, we find that HiBALs greatly outnumber LoBALs in the general BAL population, supporting prediction of the Murray and Chiang model that HiBALs have a greater global covering factor than LoBALs.

  15. Phenolic Acids from Wheat Show Different Absorption Profiles in Plasma: A Model Experiment with Catheterized Pigs

    DEFF Research Database (Denmark)

    Nørskov, Natalja; Hedemann, Mette Skou; Theil, Peter Kappel

    2013-01-01

    consumed. Benzoic acid derivatives showed low concentration in the plasma (diets. The exception was p-hydroxybenzoic acid, with a plasma concentration (4 ± 0.4 μM), much higher than the other plant phenolic acids, likely because it is an intermediate in the phenolic acid metabolism......The concentration and absorption of the nine phenolic acids of wheat were measured in a model experiment with catheterized pigs fed whole grain wheat and wheat aleurone diets. Six pigs in a repeated crossover design were fitted with catheters in the portal vein and mesenteric artery to study....... It was concluded that plant phenolic acids undergo extensive interconversion in the colon and that their absorption profiles reflected their low bioavailability in the plant matrix....

  16. Quasar 2175 Å dust absorbers - II. Correlation analysis and relationship with other absorption line systems

    Science.gov (United States)

    Ma, Jingzhe; Ge, Jian; Prochaska, J. Xavier; Zhang, Shaohua; Ji, Tuo; Zhao, Yinan; Zhou, Hongyan; Lu, Honglin; Schneider, Donald P.

    2018-03-01

    We present the cold neutral content (H I and C I gas) of 13 quasar 2175 Å dust absorbers (2DAs) at z = 1.6-2.5 to investigate the correlation between the presence of the UV extinction bump with other physical characteristics. These 2DAs were initially selected from the Sloan Digital Sky Surveys I-III and followed up with the Keck-II telescope and the Multiple Mirror Telescope as detailed in our Paper I. We perform a correlation analysis between metallicity, redshift, depletion level, velocity width, and explore relationships between 2DAs and other absorption line systems. The 2DAs on average have higher metallicity, higher depletion levels, and larger velocity widths than Damped Lyman α absorbers (DLAs) or subDLAs. The correlation between [Zn/H] and [Fe/Zn] or [Zn/H] and logΔV90 can be used as alternative stellar mass estimators based on the well-established mass-metallicity relation. The estimated stellar masses of the 2DAs in this sample are in the range of ˜109 to ˜2 × 1011 M⊙ with a median value of ˜2 × 1010 M⊙. The relationship with other quasar absorption line systems can be described as (1) 2DAs are a subset of Mg II and Fe II absorbers, (2) 2DAs are preferentially metal-strong DLAs/subDLAs, (3) More importantly, all of the 2DAs show C I detections with logN(C I) > 14.0 cm-2, and (4) 2DAs can be used as molecular gas tracers. Their host galaxies are likely to be chemically enriched, evolved, massive (more massive than typical DLA/subDLA galaxies), and presumably star-forming galaxies.

  17. Profiles of the Hα line by means of the analogical television system

    International Nuclear Information System (INIS)

    Andrillat, Y.; Fehrenbach, Ch.

    1981-01-01

    High resolution profiles of the Hα line are derived for about thirty Be stars and several bright stars by means of the analogical television system. The profiles obtained with this method fairly agree with the theoretical ones (α Lyrae). (Auth.)

  18. XMM-Newton Survey of Local O VII Absorption Lines in the Spectra of Galactic X-Ray Sources

    Science.gov (United States)

    Luo, Yang; Fang, Taotao; Ma, Renyi

    2018-04-01

    The detection of highly ionized metal absorption lines in the X-ray spectra of the Galactic X-ray binaries (XRBs) implies the distribution of hot gas along the sightline toward the background sources. However, the origin of this hot gas is still unclear: it can arise in the hot interstellar medium (ISM), or is intrinsic to the XRBs. In this paper, we present an XMM-Newton survey of the O VII absorption lines in the spectra of Galactic XRBs. A total of 33 XRBs were selected, with 29 low-mass XRBs and 4 high-mass XRBs. At a more than 3σ threshold, O VII absorption line was detected in 16 targets, among which 4 were newly discovered in this work. The average line equivalent width is centered around ∼20 mÅ. Additionally, we do not find strong correlations between the O VII EWs and the Galactic neutral absorption N H, the Galactic coordinates, or the distance of background targets. Such non-correlation may suggest contamination of the circumstellar material, or a lack of constraints on the line Doppler-b parameter. We also find that regardless of the direction of the XRBs, the O VII absorption lines are always detected when the flux of the background XRBs reaches a certain level, suggesting a uniform distribution of this hot gas. We estimate a ratio of 0.004–0.4 between the hot and neutral phases of the ISM. This is the second paper in the series following Fang et al. (2015), in which we focused on the local O VII absorption lines detected in the background AGN spectra. Detailed modeling of the hot ISM distribution will be investigated in a future paper.

  19. Stratospheric and mesospheric pressure-temperature profiles from rotational analysis of CO2 lines in atmospheric trace molecule spectroscopy/ATLAS 1 infrared solar occultation spectra

    Science.gov (United States)

    Stiller, G. P.; Gunson, M. R.; Lowes, L. L.; Abrams, M. C.; Raper, O. F.; Farmer, C. B.; Zander, R.; Rinsland, C. P.

    1995-01-01

    A simple, classical, and expedient method for the retrieval of atmospheric pressure-temperature profiles has been applied to the high-resolution infrared solar absorption spectra obtained with the atmospheric trace molecule spectroscopy (ATMOS) instrument. The basis for this method is a rotational analysis of retrieved apparent abundances from CO2 rovibrational absorption lines, employing existing constituent concentration retrieval software used in the analysis of data returned by ATMOS. Pressure-temperature profiles derived from spectra acquired during the ATLAS 1 space shuttle mission of March-April 1992 are quantitatively evaluated and compared with climatological and meteorological data as a means of assessing the validity of this approach.

  20. Amino Acid Profiling of Zinc Resistant Prostate Cancer Cell Lines: Associations With Cancer Progression.

    Science.gov (United States)

    Kratochvilova, Monika; Raudenska, Martina; Heger, Zbynek; Richtera, Lukas; Cernei, Natalia; Adam, Vojtech; Babula, Petr; Novakova, Marie; Masarik, Michal; Gumulec, Jaromir

    2017-05-01

    Failure in intracellular zinc accumulation is a key process in prostate carcinogenesis. Nevertheless, epidemiological studies of zinc administration have provided contradicting results. In order to examine the impact of the artificial intracellular increase of zinc(II) ions on prostate cancer metabolism, PNT1A, 22Rv1, and PC-3 prostatic cell lines-depicting different stages of cancer progression-and their zinc-resistant counterparts were used. To determine "benign" and "malignant" metabolic profiles, amino acid patterns, gene expression, and antioxidant capacity of these cell lines were assessed. Amino acid profiles were examined using an ion-exchange liquid chromatography. Intracellular zinc content was measured by atomic absorption spectrometry. Metallothionein was quantified using differential pulse voltammetry. The content of reduced glutathione was determined using high performance liquid chromatography coupled with an electrochemical detector. Cellular antioxidant capacity was determined by the ABTS test and gene expression analysis was performed by qRT-PCR. Long-term zinc treatment was shown to reroute cell metabolism from benign to more malignant type. Long-term application of high concentration of zinc(II) significantly enhanced cisplatin resistance, invasiveness, cellular antioxidant capacity, synthesis of glutathione, and expression of treatment resistance- and stemness-associated genes (SOX2, POU5F1, BIRC5). Tumorous cell lines universally displayed high accumulation of aspartate and sarcosine and depletion of essential amino acids. Increased aspartate/threonine, aspartate/methionine, and sarcosine/serine ratios were associated with cancer phenotype with high levels of sensitivity and specificity. Prostate 77: 604-616, 2017. © 2017 Wiley Periodicals, Inc. © 2017 Wiley Periodicals, Inc.

  1. Non-LTE profiles of the Al I autoionization lines. [for solar model atmospheres

    Science.gov (United States)

    Finn, G. D.; Jefferies, J. T.

    1974-01-01

    A non-LTE formulation is given for the transfer of radiation in the autoionizing lines of neutral aluminum at 1932 and 1936 A through both the Bilderberg and Harvard-Smithsonian model atmospheres. Numerical solutions for the common source function of these lines and their theoretical line profiles are calculated and compared with the corresponding LTE profiles. The results show that the non-LTE profiles provide a better match with the observations. They also indicate that the continuous opacity of the standard solar models should be increased in this wavelength region if the center-limb variations of observed and theoretical profiles of these lines are to be in reasonable agreement.

  2. AN INFRARED EXCESS IDENTIFIED IN RADIO-LOUD BROAD ABSORPTION LINE QUASARS

    Energy Technology Data Exchange (ETDEWEB)

    DiPompeo, M. A.; Runnoe, J. C.; Brotherton, M. S.; Myers, A. D. [Department of Physics and Astronomy 3905, University of Wyoming, 1000 East University, Laramie, WY 82071 (United States)

    2013-01-10

    If broad absorption line (BAL) quasars represent a high-covering-fraction evolutionary state (even if this is not the sole factor governing the presence of BALs), it is expected that they should show an excess of mid-infrared radiation compared to normal quasars. Some previous studies have suggested that this is not the case. We perform the first analysis of the IR properties of radio-loud BAL quasars, using IR data from WISE and optical (rest-frame ultraviolet) data from SDSS, and compare the BAL quasar sample with a well-matched sample of unabsorbed quasars. We find a statistically significant excess in the mid- to near-infrared luminosities of BAL quasars, particularly at rest-frame wavelengths of 1.5 and 4 {mu}m. Our sample was previously used to show that BALs are observed along many lines of sight toward quasars, but with an overabundance of more edge-on sources, suggesting that orientation factors into the appearance of BALs. The evidence here-of a difference in IR luminosities between BAL quasars and unabsorbed quasars-can be ascribed to evolution. This suggests that a merging of the current BAL paradigms is needed to fully describe the class.

  3. BROAD ABSORPTION LINE DISAPPEARANCE ON MULTI-YEAR TIMESCALES IN A LARGE QUASAR SAMPLE

    Energy Technology Data Exchange (ETDEWEB)

    Filiz Ak, N.; Brandt, W. N.; Schneider, D. P. [Department of Astronomy and Astrophysics, Pennsylvania State University, University Park, PA 16802 (United States); Hall, P. B. [Department of Physics and Astronomy, York University, 4700 Keele St., Toronto, Ontario M3J 1P3 (Canada); Anderson, S. F.; Gibson, R. R. [Astronomy Department, University of Washington, Seattle, WA 98195 (United States); Lundgren, B. F. [Department of Physics, Yale University, New Haven, CT 06511 (United States); Myers, A. D. [Department of Physics and Astronomy, University of Wyoming, Laramie, WY 82071 (United States); Petitjean, P. [Institut d' Astrophysique de Paris, Universite Paris 6, F-75014, Paris (France); Ross, Nicholas P. [Lawrence Berkeley National Laboratory, 1 Cyclotron Road, Berkeley, CA 92420 (United States); Shen Yue [Harvard-Smithsonian Center for Astrophysics, 60 Garden Street, MS-51, Cambridge, MA 02138 (United States); York, D. G. [Department of Astronomy and Astrophysics, and Enrico Fermi Institute, University of Chicago, 5640 S. Ellis Ave., Chicago, IL 60637 (United States); Bizyaev, D.; Brinkmann, J.; Malanushenko, E.; Oravetz, D. J.; Pan, K.; Simmons, A. E. [Apache Point Observatory, P.O. Box 59, Sunspot, NM 88349-0059 (United States); Weaver, B. A., E-mail: nfilizak@astro.psu.edu [Center for Cosmology and Particle Physics, New York University, New York, NY 10003 (United States)

    2012-10-01

    We present 21 examples of C IV broad absorption line (BAL) trough disappearance in 19 quasars selected from systematic multi-epoch observations of 582 bright BAL quasars (1.9 < z < 4.5) by the Sloan Digital Sky Survey-I/II (SDSS-I/II) and SDSS-III. The observations span 1.1-3.9 yr rest-frame timescales, longer than have been sampled in many previous BAL variability studies. On these timescales, Almost-Equal-To 2.3% of C IV BAL troughs disappear and Almost-Equal-To 3.3% of BAL quasars show a disappearing trough. These observed frequencies suggest that many C IV BAL absorbers spend on average at most a century along our line of sight to their quasar. Ten of the 19 BAL quasars showing C IV BAL disappearance have apparently transformed from BAL to non-BAL quasars; these are the first reported examples of such transformations. The BAL troughs that disappear tend to be those with small-to-moderate equivalent widths, relatively shallow depths, and high outflow velocities. Other non-disappearing C IV BALs in those nine objects having multiple troughs tend to weaken when one of them disappears, indicating a connection between the disappearing and non-disappearing troughs, even for velocity separations as large as 10,000-15,000 km s{sup -1}. We discuss possible origins of this connection including disk-wind rotation and changes in shielding gas.

  4. Comparative QSAR studies on PAMPA/modified PAMPA for high throughput profiling of drug absorption potential with respect to Caco-2 cells and human intestinal absorption

    Science.gov (United States)

    Verma, Rajeshwar P.; Hansch, Corwin; Selassie, Cynthia D.

    2007-01-01

    Despite the dramatic increase in speed of synthesis and biological evaluation of new chemical entities, the number of compounds that survive the rigorous processes associated with drug development is low. Thus, an increased emphasis on thorough ADMET (absorption, distribution, metabolism, excretion and toxicity) studies based on in vitro and in silico approaches allows for early evaluation of new drugs in the development phase. Artificial membrane permeability measurements afford a high throughput, relatively low cost but labor intensive alternative for in vitro determination of drug absorption potential; parallel artificial membrane permeability assays have been extensively utilized to determine drug absorption potentials. The present study provides comparative QSAR analysis on PAMPA/modified PAMPA for high throughput profiling of drugs with respect to Caco-2 cells and human intestinal absorption.

  5. C IV Broad Absorption Line Variability in QSO Spectra from SDSS Surveys

    Directory of Open Access Journals (Sweden)

    Demetra De Cicco

    2017-12-01

    Full Text Available Broad absorption lines (BALs in the spectra of quasi-stellar objects (QSOs are thought to arise from outflowing winds along our line of sight; winds, in turn, are thought to originate from the accretion disk, in the very surroundings of the central supermassive black hole (SMBH, and they likely affect the accretion process onto the SMBH, as well as galaxy evolution. BALs can exhibit variability on timescales typically ranging from months to years. We analyze such variability and, in particular, BAL disappearance, with the aim of investigating QSO physics and structure. We search for disappearing C IV BALs in the spectra of 1,319 QSOs from different programs from the Sloan Digital Sky Survey (SDSS; the analyzed time span covers 0.28–4.9 year (rest frame, and the source redshifts are in the range 1.68–4.27. This is to date the largest sample ever used for such a study. We find 67 sources (5.1-0.6+0.7% of the sample with 73 disappearing BALs in total (3.9-0.5+0.5% of the total number of C iv BALs detected; some sources have more than one BAL that disappears. We compare the sample of disappearing BALs to the whole sample of BALs, and investigate the correlation in the variability of multiple troughs in the same spectrum. We also derive estimates of the average lifetime of a BAL trough and of the BAL phase along our line of sight.

  6. A far wing line shape theory and its application to the foreign-broadened water continuum absorption. III

    Science.gov (United States)

    Ma, Q.; Tipping, R. H.

    1992-01-01

    The far wing line shape theory developed previously and applied to the calculation of the continuum absorption of pure water vapor is extended to foreign-broadened continua. Explicit results are presented for H2O-N2 and H2O-CO2 in the frequency range from 0 to 10,000/cm. For H2O-N2 the positive and negative resonant frequency average line shape functions and absorption coefficients are computed for a number of temperatures between 296 and 430 K for comparison with available laboratory data. In general the agreement is very good.

  7. Measurement of atmospheric NO2 profile using three-wavelength dual-differential absorption lidar

    Science.gov (United States)

    Liu, Qiuwu; Chen, Yafeng; Wang, Jie; Huang, Jian; Hu, Shunxing

    2017-11-01

    Lidar instruments are efficient detectors of air pollutants such as nitrogen dioxide (NO2). However, the measurement errors are not negligible due to the influence of the aerosol in the atmosphere. We present a novel lidar for measuring tropospheric NO2 vertical profiles. For improving the received powers, the emitter unit consists of two pulsed pump laser - dye laser combination, and use three wavelengths of 448.10nm, 447.20nm and 446.60 nm corresponding to the strong, medium and weak absorption of NO2 respectively. The effects of aerosol on tropospheric NO2 measurements by three - wavelength (448.10 -447.20 -446.60 nm) dual differential absorption lidar (dual-DIAL) and conventional two - wave length (448.10- 446.60nm) differential absorption lidar (DIAL) are theoretical analyzed, and their system err are computer simulated. Experimental results show that the three - wavelength dual - DIAL method is more effective to reduce the effects of aerosol than the two - wavelength DIAL method, and its system error is no more than 4% without correcting the aerosol effect.

  8. Absorption and emission line shapes in the O(2) atmospheric bands: Theoretical model and limb viewing simulations.

    Science.gov (United States)

    Abreu, V J; Bucholtz, A; Hays, P B; Ortland, D; Skinner, W R; Yee, J H

    1989-06-01

    A multiple scattering radiative transfer model has been developed to carry out a line by line calculation of the absorption and emission limb measurements that will be made by the High Resolution Doppler Imager to be flown on the Upper Atmosphere Research Satellite. The multiple scattering model uses the doubling and adding methods to solve the radiative transfer equation, modified to take into account a spherical inhomogeneous atmosphere. Representative absorption and emission line shapes in the O(2)((1)Sigma(+)(g)-(3)Sigma(-)(g)) atmospheric bands (A, B, and gamma) and their variation with altitude are presented. The effects of solar zenith angle, aerosol loading, surface albedo, and cloud height on the line shapes are also discussed.

  9. In-line evanescent-wave microfluidic absorption sensor based on an embedded optical microfiber coil

    OpenAIRE

    Lorenzi, R.; Jung, Y.; Brambilla, G.

    2011-01-01

    We present the absorption spectra collected with an evanescent-field absorption sensor. The device comprises an active fluidic channel with an embedded microfiber coil resonator. Deviations from Beer-Lambert law will be discussed in terms of adsorption mechanism.

  10. Laboratory Measurements of the 940, 1130, and 1370 nm Water Vapor Absorption Band Profiles

    Science.gov (United States)

    Giver, Lawrence P.; Gore, Warren J.; Pilewskie, P.; Freedman, R. S.; Chackerian, C., Jr.; Varanasi, P.

    2001-01-01

    We have used the solar spectral flux radiometer (SSFR) flight instrument with the Ames 25 meter base-path White cell to obtain about 20 moderate resolution (8 nm) pure water vapor spectra from 650 to 1650 nm, with absorbing paths from 806 to 1506 meters and pressures up to 14 torr. We also obtained a set at 806 meters with several different air-broadening pressures. Model simulations were made for the 940, 1130, and 1370 nm absorption bands for some of these laboratory conditions using the Rothman, et al HITRAN-2000 linelist. This new compilation of HITRAN includes new intensity measurements for the 940 nm region. We compared simulations for our spectra of this band using HITRAN-2000 with simulations using the prior HITRAN-1996. The simulations of the 1130 nm band show about 10% less absorption than we measured. There is some evidence that the total intensity of this band is about 38% stronger than the sum of the HITRAN line intensities in this region. In our laboratory conditions the absorption depends approximately on the square root of the intensity. Thus, our measurements agree that the band is stronger than tabulated in HITRAN, but by about 20%, substantially less than the published value. Significant differences have been shown between Doppler-limited resolution spectra of the 1370 nm band obtained at the Pacific Northwest National Laboratory and HITRAN simulations. Additional new intensity measurements in this region are continuing to be made. We expect the simulations of our SSFR lab data of this band will show the relative importance of improving the HITRAN line intensities of this band for atmospheric measurements.

  11. Solar line Lsub(α) profile and an interstellar wind dynamics

    International Nuclear Information System (INIS)

    Burgin, M.S.

    1978-01-01

    Analytical theory of interstellar hydrogen atom motion into the region of solar Lsub(α)-radiation is given. Hydrogen distribution in the Solar system is calculated with an account of the Lsub(α) solar line profile difference from a flat one. The effect of the profile form on the scattered radiation intensity is estimated. Calculation errors of the scattered radiation intensity, connected with the difference between a line profile and a flat one, do not exceed 5% for the real Lsub(α) solar line profile

  12. Ion temperature profile measurements using the far line wings of Hα

    International Nuclear Information System (INIS)

    Bengtson, R.D.; Boedo, J.; Rowan, W.L.

    1986-01-01

    This paper presents ion temperature profiles for the outer half of the TEXT plasma using the Doppler broadened far line wings of the H α line profile. The technique depends on the assumption that the hydrogen neutrals have equilibrated with the ions through charge exchange collisions. Data reduction depends upon going far enough out on the line wing that the intensity profile is characteristic of the hottest portion of the plasma along the line of sight, thus removing the need for an inversion procedure. A Fabry-Perot interferometer is used to measure the line profiles because of its superior instrumental profile. This technique is compared with the charge exchange technique and Doppler broadening of impurities. The application to ion temperature measurements using a diagnostic neutral beam is also discussed

  13. The SAURON project - XI. Stellar populations from absorption-line strength maps of 24 early-type spirals

    NARCIS (Netherlands)

    Peletier, Reynier F.; Falcon-Barroso, Jesus; Bacon, Roland; Cappellari, Michele; Davies, Roger L.; de Zeeuw, P. T.; Emsellem, Eric; Ganda, Katia; Krajnovic, Davor; Kuntschner, Harald; McDermid, Richard M.; Sarzi, Marc; van de Ven, Glenn

    2007-01-01

    We present absorption-line strength maps of a sample of 24 representative early-type spiral galaxies, mostly of type Sa, obtained as part of the SAURON (Spectrographic Areal Unit for Research on Optical Nebulae) survey of nearby galaxies using our custom-built integral-field spectrograph. Using

  14. On-line Zeeman atomic absorption spectroscopy for mercury analysis in oil shale gases. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Girvin, D.C.; Fox, J.P.

    1979-08-01

    The technique utilizes ZAA for on-line measurement of mercury in the presence of smoke, organic vapors, and oil mist in offgases from oil shale processing plants. The spectrometer utilizes a new flow-through stainless steel (SS) furnace maintained at 900/sup 0/C by joule heating. Corrosion of the furnace by H/sub 2/S in the sample gas is minimized by diffusion of Al into the surface of the SS. Corrosion tests with 2% (v/v) H/sub 2/S at 1093/sup 0/C gave an estimated furnace lifetime of three days. The instrumental response with this furnace is characterized by a detection limit (DL) of 2 ppB, a linear response up to 100 ppB, and a precision of +- 7% or better. In the 50 ppB to 1.6 ppM range a furnace with a 5 cm optical absorption tube yields a DL of 10 ppB, a linear response up to 800 ppB, and a precision of +- 10% or better. Sample gas flow rates can be varied between 400 and 4000 scc/min for either furance.

  15. NARROW Na AND K ABSORPTION LINES TOWARD T TAURI STARS: TRACING THE ATOMIC ENVELOPE OF MOLECULAR CLOUDS

    Energy Technology Data Exchange (ETDEWEB)

    Pascucci, I.; Simon, M. N. [Lunar and Planetary Laboratory, The University of Arizona, Tucson, AZ 85721 (United States); Edwards, S. [Five College Astronomy Department, Smith College, Northampton, MA 01063 (United States); Heyer, M. [Department of Astronomy, University of Massachusetts, Amherst, MA 01003-9305 (United States); Rigliaco, E. [Institute for Astronomy, ETH Zurich, Wolfgang-Pauli-Strasse 27, CH-8093 Zurich (Switzerland); Hillenbrand, L. [Department of Astronomy, California Institute of Technology, Pasadena, CA 91125 (United States); Gorti, U.; Hollenbach, D., E-mail: pascucci@lpl.arizona.edu [SETI Institute, Mountain View, CA 94043 (United States)

    2015-11-20

    We present a detailed analysis of narrow Na i and K i absorption resonance lines toward nearly 40 T Tauri stars in Taurus with the goal of clarifying their origin. The Na i λ5889.95 line is detected toward all but one source, while the weaker K i λ7698.96 line is detected in about two-thirds of the sample. The similarity in their peak centroids and the significant positive correlation between their equivalent widths demonstrate that these transitions trace the same atomic gas. The absorption lines are present toward both disk and diskless young stellar objects, which excludes cold gas within the circumstellar disk as the absorbing material. A comparison of Na i and CO detections and peak centroids demonstrates that the atomic gas and molecular gas are not co-located, the atomic gas being more extended than the molecular gas. The width of the atomic lines corroborates this finding and points to atomic gas about an order of magnitude warmer than the molecular gas. The distribution of Na i radial velocities shows a clear spatial gradient along the length of the Taurus molecular cloud filaments. This suggests that absorption is associated with the Taurus molecular cloud. Assuming that the gradient is due to cloud rotation, the rotation of the atomic gas is consistent with differential galactic rotation, whereas the rotation of the molecular gas, although with the same rotation axis, is retrograde. Our analysis shows that narrow Na i and K i absorption resonance lines are useful tracers of the atomic envelope of molecular clouds. In line with recent findings from giant molecular clouds, our results demonstrate that the velocity fields of the atomic and molecular gas are misaligned. The angular momentum of a molecular cloud is not simply inherited from the rotating Galactic disk from which it formed but may be redistributed by cloud–cloud interactions.

  16. NARROW Na AND K ABSORPTION LINES TOWARD T TAURI STARS: TRACING THE ATOMIC ENVELOPE OF MOLECULAR CLOUDS

    International Nuclear Information System (INIS)

    Pascucci, I.; Simon, M. N.; Edwards, S.; Heyer, M.; Rigliaco, E.; Hillenbrand, L.; Gorti, U.; Hollenbach, D.

    2015-01-01

    We present a detailed analysis of narrow Na i and K i absorption resonance lines toward nearly 40 T Tauri stars in Taurus with the goal of clarifying their origin. The Na i λ5889.95 line is detected toward all but one source, while the weaker K i λ7698.96 line is detected in about two-thirds of the sample. The similarity in their peak centroids and the significant positive correlation between their equivalent widths demonstrate that these transitions trace the same atomic gas. The absorption lines are present toward both disk and diskless young stellar objects, which excludes cold gas within the circumstellar disk as the absorbing material. A comparison of Na i and CO detections and peak centroids demonstrates that the atomic gas and molecular gas are not co-located, the atomic gas being more extended than the molecular gas. The width of the atomic lines corroborates this finding and points to atomic gas about an order of magnitude warmer than the molecular gas. The distribution of Na i radial velocities shows a clear spatial gradient along the length of the Taurus molecular cloud filaments. This suggests that absorption is associated with the Taurus molecular cloud. Assuming that the gradient is due to cloud rotation, the rotation of the atomic gas is consistent with differential galactic rotation, whereas the rotation of the molecular gas, although with the same rotation axis, is retrograde. Our analysis shows that narrow Na i and K i absorption resonance lines are useful tracers of the atomic envelope of molecular clouds. In line with recent findings from giant molecular clouds, our results demonstrate that the velocity fields of the atomic and molecular gas are misaligned. The angular momentum of a molecular cloud is not simply inherited from the rotating Galactic disk from which it formed but may be redistributed by cloud–cloud interactions

  17. Progress towards an Autonomous Field Deployable Diode-Laser-Based Differential Absorption Lidar (DIAL for Profiling Water Vapor in the Lower Troposphere

    Directory of Open Access Journals (Sweden)

    Kevin S. Repasky

    2013-11-01

    Full Text Available A laser transmitter has been developed and incorporated into a micro-pulse differential absorption lidar (DIAL for water vapor profiling in the lower troposphere as an important step towards long-term autonomous field operation. The laser transmitter utilizes two distributed Bragg reflector (DBR diode lasers to injection seed a pulsed tapered semiconductor optical amplifier (TSOA, and is capable of producing up to 10 mJ of pulse energy with a 1 ms pulse duration and a 10 kHz pulse repetition frequency. The on-line wavelength of the laser transmitter can operate anywhere along the water vapor absorption feature centered at 828.187 nm (in vacuum depending on the prevailing atmospheric conditions, while the off-line wavelength operates at 828.287 nm. This laser transmitter has been incorporated into a DIAL instrument utilizing a 35.6 cm Schmidt-Cassegrain telescope and fiber coupled avalanche photodiode (APD operating in the photon counting mode. The performance of the DIAL instrument was demonstrated over a ten-day observation period. During this observation period, data from radiosondes were used to retrieve water vapor number density profiles for comparisons with the number density profiles retrieved from the DIAL data.

  18. Impact of broadened laser line-shape on retrievals of atmospheric species from lidar sounding absorption spectra.

    Science.gov (United States)

    Chen, Jeffrey R; Numata, Kenji; Wu, Stewart T

    2015-02-09

    We examine the impact of broadened laser line-shape on retrievals of atmospheric species from lidar-sounding absorption spectra. The laser is assumed to be deterministically modulated into a stable, nearly top-hat frequency comb to suppress the stimulated Brillouin scattering, allowing over 10-fold pulse energy increase without adding measurement noise. Our model remains accurate by incorporating the laser line-shape factor into the effective optical depth. Retrieval errors arising from measurement noise and model bias are analyzed parametrically and numerically to provide deeper insight. The stable laser line-shape broadening minimally degrades the column-averaged retrieval, but can significantly degrade the multiple-layer retrievals.

  19. The absorption spectrum of acetylene near 1 μm (9280-10740 cm-1) (I): Line positions

    Science.gov (United States)

    Lyulin, O. M.; Béguier, S.; Hu, S. M.; Campargue, A.

    2018-03-01

    The high-resolution absorption spectrum of acetylene is studied by Fourier-transform spectroscopy (FTS) in the 9280-10740 cm-1 region dominated by the 3ν3 band near 9640 cm-1. Line positions and intensities of 1899 12C2H2 and 151 12C13CH2 absorption lines are retrieved from a spectrum recorded at room temperature (298.5 K) with a pressure of 87.6 hPa and a path length of 105 m. The measured 12C2H2 lines belong to thirty-three bands, twelve of them being newly assigned. The lines of 12C13CH2 in normal abundance (2.2%) belong to seven bands. For comparison the HITRAN database in the same region includes 301 lines of four 12C2H2 bands. Spectroscopic parameters of the upper vibrational levels are derived from band-by-band fits of the line positions (typical rms values are on the order of 0.002 cm-1). The comparison to the HITRAN line list and to results obtained using the global effective operator approach reveals a number of significant deviations. The occurrence of local rovibrational perturbations affecting a number of the analyzed bands is illustrated by the case of the strong 3ν3 band.

  20. Noninvasive monitoring of glucose concentration using differential absorption low-coherence interferometry based on rapid scanning optical delay line

    Energy Technology Data Exchange (ETDEWEB)

    Zhou Yong; Zeng Nan; He Yonghong, E-mail: heyh@sz.tsinghua.edu.cn [Laboratory of Optical Imaging and Sensing, Graduate School at Shenzhen, Tsinghua University, Shenzhen, 518055 (China)

    2011-01-01

    A non-invasive method of detecting glucose concentration using differential absorption low-coherence interferometry (DALCI) based on rapid scanning optical delay line is presented. Two light sources, one centered within (1625 nm) a glucose absorption band, while the other outside (1310 nm) the glucose absorption band, are used in the experiment. The low-coherence interferometry (LCI) is employed to obtain the signals back-reflecting from the iris which carries the messages of material concentration in anterior chamber. Using rapid scanning optical delay line (RSOD) as the reference arm, we can detect the signals in a very short time. Therefore the glucose concentration can be monitored in real-time, which is very important for the detection in vivo. In our experiments, the cornea and aqueous humor can be treated as nearly non-scattering substance. The difference in the absorption coefficient is much larger than the difference in the scattering coefficient, so the influence of scattering can be neglected. By subtracting the algorithmic low-coherence interference signals of the two wavelengths, the absorption coefficient can be calculated which is proportional to glucose concentration. To reduce the speckle noise, a 30 variation of signals were used before the final calculation of the glucose concentration. The improvements of our experiment are also discussed in the article. The method has a potential application for noninvasive detection of glucose concentration in vivo and in real-time.

  1. Metabolite Depletion Affects Flux Profiling of Cell Lines

    DEFF Research Database (Denmark)

    Nilsson, A.; Haanstra, J. R.; Teusink, B.

    2018-01-01

    Quantifying the rate of consumption and release of metabolites (i.e., flux profiling) has become integral to the study of cancer. The fluxes as well as the growth of the cells may be affected by metabolite depletion during cultivation.......Quantifying the rate of consumption and release of metabolites (i.e., flux profiling) has become integral to the study of cancer. The fluxes as well as the growth of the cells may be affected by metabolite depletion during cultivation....

  2. Infrared Spectroscopy of CO Ro-vibrational Absorption Lines toward the Obscured AGN IRAS 08572+3915

    OpenAIRE

    Shirahata, Mai; Nakagawa, Takao; Usuda, Tomonori; Goto, Miwa; Suto, Hiroshi; Geballe, T. R.

    2012-01-01

    We present high-resolution spectroscopy of gaseous CO absorption in the fundamental ro-vibrational band toward the heavily obscured active galactic nucleus (AGN) IRAS 08572+3915. We have detected absorption lines up to highly excited rotational levels (J 200 km s-1) of which is due to blueshifted (-160 km s-1) gas at a temperature of ~ 270 K absorbing at velocities as high as -400 km s-1. A much weaker but even warmer (~ 700 K) component, which is highly redshifted (+100 km s-1), is also dete...

  3. A multiwavelength continuum characterization of high-redshift broad absorption line quasars

    Science.gov (United States)

    Tuccillo, D.; Bruni, G.; DiPompeo, M. A.; Brotherton, M. S.; Pasetto, A.; Kraus, A.; González-Serrano, J. I.; Mack, K.-H.

    2017-06-01

    We present the results of a multiwavelength study of a sample of high-redshift radio-loud (RL) broad absorption line (BAL) quasars. This way, we extend to higher redshift previous studies on the radio properties and broad-band optical colours of these objects. We have selected a sample of 22 RL BAL quasars with 3.6 ≤ z ≤ 4.8 cross-correlating the FIRST radio survey with the Sloan Digital Sky Survey (SDSS). Flux densities between 1.25 and 9.5 GHz have been collected with the Jansky Very Large Array and Effelsberg-100 m telescopes for 15 BAL and 14 non-BAL quasars used as a comparison sample. We determine the synchrotron peak frequency, constraining their age. A large number of gigahertz peaked spectrum and high-frequency peakers sources have been found in both samples (80 per cent for BAL and 71 per cent for non-BAL quasars), not suggesting a younger age for BAL quasars. The spectral index distribution provides information about the orientation of these sources, and we find statistically similar distributions for the BAL and non-BAL quasars in contrast to work done on lower redshift samples. Our sample may be too small to convincingly find the same effect, or might represent a real evolutionary effect based on the large fraction of young sources. We also study the properties of broad-band colours in both optical (SDSS) and near- and mid-infrared (UK Infrared Telescope Deep Sky Survey and Wide-field Infrared Survey Explorer - WISE) bands, finding that also at high-redshift BAL quasars tend to be optically redder than non-BAL quasars. However, these differences are no more evident at longer wavelength, when comparing colours of the two samples by mean of the WISE survey.

  4. Aerosol absorption profiling from the synergy of lidar and sun-photometry: the ACTRIS-2 campaigns in Germany, Greece and Cyprus

    Directory of Open Access Journals (Sweden)

    Tsekeri Alexandra

    2018-01-01

    Full Text Available Aerosol absorption profiling is crucial for radiative transfer calculations and climate modelling. Here, we utilize the synergy of lidar with sun-photometer measurements to derive the absorption coefficient and single scattering albedo profiles during the ACTRIS-2 campaigns held in Germany, Greece and Cyprus. The remote sensing techniques are compared with in situ measurements in order to harmonize and validate the different methodologies and reduce the absorption profiling uncertainties.

  5. Determination of self-absorption in emission lines from some optically thick plasmas

    International Nuclear Information System (INIS)

    Pianarosa, P.; Gagne, J.M.; Larin, G.; Saint-Dizier, J.P.

    1982-01-01

    We present a relatively simple method by which the amount of self-absorption in laboratory-produced plasmas can be evaluated. As an illustration we apply it here to the evaluation of self-absorption of a U I resonance transition from a hollow-cathode-generated plasma. The method can be generalized to include more-complex situations

  6. XRAYL: a program for producing idealized powder diffraction line profiles from overlapped powder patterns

    Energy Technology Data Exchange (ETDEWEB)

    Hubbard, C.R.; Morosin, B. [Sandia National Labs., Albuquerque, NM (United States); Stewart, J.M. [Maryland Univ., College Park, MD (United States)

    1996-09-01

    The X-ray diffraction patterns of samples of polycrystalline materials are used to identify and characterize phases. Very often the total (or composite) profile consists of a series of overlapping profiles. In many applications it is necessary to separate the component profiles from the total profile. (In this document the terms {ital profile, line}, and {ital peak} are used interchangeably to represent these features of X-ray or neutron diffraction patterns.) A computer program, XRAYL, first developed in the 1980s and subsequently enlarged and improved, allows the fitting of analytical functions to powder diffraction lines. The fitting process produces parameters of chosen profile functions, diffraction line by diffraction line. The resulting function parameters may then be used to generate ``idealized`` powder diffraction lines as counts at steps in 2{Omega}. The generated lines are effectively free of statistical noise and contributions from overlapping lines. Each separated line extends to background on both sides of the generated profile. XRAYL may, therefore, be used in X-ray powder diffraction profile analysis as a preprocessor program that is, separating peaks and feeding the ``resolved`` data to subsequent analysis programs. This self- contained document includes: (1) a description of the fitting functions coded into XRAYL, (2) an outline of the least-squares algorithm used in fitting the profile function, (3) the file formats and contents utilized by the computer code, (4) the user options and their presentation requirements for execution of the program, (5) an example of input and output for a test case, and (6) source code listings on a diskette.

  7. Estimation of Mass-Loss Rates from Emission Line Profiles in the UV Spectra of Cool Stars

    Science.gov (United States)

    Carpenter, K. G.; Robinson, R. D.; Harper, G. M.

    1999-01-01

    The photon-scattering winds of cool, low-gravity stars (K-M giants and supergiants) produce absorption features in the strong chromospheric emission lines. This provides us with an opportunity to assess important parameters of the wind, including flow and turbulent velocities, the optical depth of the wind above the region of photon creation, and the star's mass-loss rate. We have used the Lamers et al. Sobolev with Exact Integration (SEI) radiative transfer code along with simple models of the outer atmospheric structure to compute synthetic line profiles for comparison with the observed line profiles. The SEI code has the advantage of being computationally fast and allows a great number of possible wind models to be examined. We therefore use it here to obtain initial first-order estimates of the wind parameters. More sophisticated, but more time-consuming and resource intensive calculations will be performed at a later date, using the SEI-deduced wind parameters as a starting point. A comparison of the profiles over a range of wind velocity laws, turbulence values, and line opacities allows us to constrain the wind parameters, and to estimate the mass-loss rates. We have applied this analysis technique (using lines of Mg II, 0 I, and Fe II) so far to four stars: the normal K5-giant alpha Tau, the hybrid K-giant gamma Dra, the K5 supergiant lambda Vel, and the M-giant gamma Cru. We present in this paper a description of the technique, including the assumptions which go into its use, an assessment of its robustness, and the results of our analysis.

  8. MGN V RSS LINE OF SIGHT ACCELERATION PROFILES V1.0

    Data.gov (United States)

    National Aeronautics and Space Administration — Line of Sight Acceleration Profile Data Records (LOSAPDR) consist of data from Doppler tracking of the orbiting spacecraft. The relative motion of the spacecraft and...

  9. LP L RSS LINE OF SIGHT ACCELERATION PROFILES V1.0

    Data.gov (United States)

    National Aeronautics and Space Administration — Line of Sight Acceleration Profile Data Records (LOSAPDR) consist of data from Doppler tracking of the orbiting spacecraft. The relative motion of the spacecraft and...

  10. Study of an intense proton beam profiler based on laser absorption; Etude d'un profileur optique de faisceaux intenses de protons par absorption laser

    Energy Technology Data Exchange (ETDEWEB)

    Pottin, B

    2001-10-01

    Among the challenges of high current proton accelerators, the development of new beam diagnostics is of major importance. The main difficulty for these instruments, is the beam power which deteriorates any instruments used to catch it. The chosen detectors are therefore 'non-interceptive systems. After an introduction concerning characteristics of the used accelerator (chapter I), parameters defining a beam of particles are presented (chapter II). Among these ones, the profile is an important beam characteristic for its transport. After the description of the different types of beam profilers, their problematic application to intense beams is discussed. New physical phenomena have to be used for profilers. Thus, we have prospected optical luminescence phenomena. The light produced during the interaction of protons with the residual gas and/or locally injected is a source of informations on beam characteristics. In chapters III and IV, there is an experimental and theoretical analysis of the luminescence. Chapter V is a direct application of spectroscopic measurements to estimate the output of protons with a non-interceptive technique. With the spectral analysis, the idea of a profiler based on laser absorption is developed. This presentation is both theoretical and experimental (chapters 6 and 7). The laser absorption needs the use of metastable states we define in the chapter 6. The evolution of the metastable states, with time and space, has been rigorously studied to discuss the concept of an optical profiler. Chapter VII presents all the necessary instrumentation for the use of a laser and the first measurements with the beam. At the thesis end, the first recorded profile is presented. An experimental critic is presented with a description of the different sources of errors and the proposed cures. (author)

  11. Effect of photoelectric fluorescence on the formation of x-ray absorption lines in laser-plasma experiments

    International Nuclear Information System (INIS)

    Epstein, R.; Yaakobi, B.

    1991-01-01

    In laser-plasma experiments, conditions in an embedded layer in a target shell can be inferred from the spectral attenuation of x-ray continuum radiation by the layer [B. Yaakobi et al., Opt. Commun. 34, 213 (1980)]. In such experiments, absorption lines are formed by 1s-2p absorption transitions in heliumlike through fluorinelike species of certain ions in the layer to be diagnosed. The areal density of each species can be inferred from the attenuation in the spectrum within its respective band, provided the average 1s-2p absorption cross sections for each species are known and provided competing line-forming mechanisms are taken into account. In photoelectric fluorescence, which is one such potentially important competing mechanism, the formation of a 1s vacancy by photoionization is followed by 2p-1s spontaneous emission within the same spectral range as the 1s-2p absorption band of the same ion. The importance of photoelectric fluorescence depends on the supply of ionizing photons, which is sensitive to the design of the experiment. This process should be considered when analyzing experiments where the continuum is hardened by high core temperatures, by opacity effects, or by core components that radiate efficiently at ionizing energies

  12. On-line Zeeman atomic-absorption spectroscopy for mercury analysis in oil-shale gases. Final report

    Energy Technology Data Exchange (ETDEWEB)

    Girvin, D.C.; Fox, J.P.

    1981-03-01

    This report describes an instrumental technique to continuously measure total mercury in gas streams on a real-time basis. The technique utilizes Zeeman atomic absorption spectroscopy (ZAA) for on-line measurement of mercury in the presence of smoke, organic vapors, and oil mist which are typically present in offgases from oil shale processing plants. The accuracy of the ZAA background correction technique enables analytical measurement of mercury with up to 95% attenuation of the 2537A analytical line by broadband uv absorption. Furnaces with optical absorption tubes of different lengths are used depending upon the mercury concentration. Between 5 and 250 ppB (nanomoles Hg/mole of gas) of mercury in an 18-cm furnace is used. The instrumental response with this furnace is characterized by a detection limit (DL) of 2 ppB, a linear response up to 100 ppB, and a precision of +- 7% or better. In the 50 ppB to 1.6 ppM range, a furnace with a 5-cm optical absorption tube yields a DL of 10 ppB, a linear response up to 800 ppB, and a precision of +- 10% or better. Sample gas flow rates can be varied between 400 and 4000 scc/min for either furnace. 35 figures, 3 tables.

  13. Possible evidence for a variable fine-structure constant from QSO absorption lines: motivations, analysis and results

    Science.gov (United States)

    Murphy, M. T.; Webb, J. K.; Flambaum, V. V.; Dzuba, V. A.; Churchill, C. W.; Prochaska, J. X.; Barrow, J. D.; Wolfe, A. M.

    2001-11-01

    An experimental search for variation in the fundamental coupling constants is strongly motivated by modern high-energy physics theories. Comparison of quasar (QSO) absorption-line spectra with laboratory spectra provides a sensitive probe for variability of the fine-structure constant, α, over cosmological time-scales. We have previously developed and applied a new method providing an order-of-magnitude gain in precision over previous optical astrophysical constraints. Here we extend that work by including new quasar spectra of damped Lyman-α absorption systems. We also reanalyse our previous lower-redshift data and confirm our initial results. The constraints on α come from simultaneous fitting of absorption lines of subsets of the following species: Mgi, Mgii, Alii, Aliii, Siii, Crii, Feii, Niii and Znii. We present a detailed description of our methods and results based on an analysis of 49 quasar absorption systems (towards 28 QSOs) covering the redshift range [formmu2]0.5quote above is the raw value, not corrected for any of these systematic effects. The only significant systematic effects so far identified, if removed from our data, would lead to a more significant deviation of [formmu5]Δα/α from zero.

  14. Use of electrothermal atomic absorption spectrometry for size profiling of gold and silver nanoparticles.

    Science.gov (United States)

    Panyabut, Teerawat; Sirirat, Natnicha; Siripinyanond, Atitaya

    2018-02-13

    Electrothermal atomic absorption spectrometry (ETAAS) was applied to investigate the atomization behaviors of gold nanoparticles (AuNPs) and silver nanoparticles (AgNPs) in order to relate with particle size information. At various atomization temperatures from 1400 °C to 2200 °C, the time-dependent atomic absorption peak profiles of AuNPs and AgNPs with varying sizes from 5 nm to 100 nm were examined. With increasing particle size, the maximum absorbance was observed at the longer time. The time at maximum absorbance was found to linearly increase with increasing particle size, suggesting that ETAAS can be applied to provide the size information of nanoparticles. With the atomization temperature of 1600 °C, the mixtures of nanoparticles containing two particle sizes, i.e., 5 nm tannic stabilized AuNPs with 60, 80, 100 nm citrate stabilized AuNPs, were investigated and bimodal peaks were observed. The particle size dependent atomization behaviors of nanoparticles show potential application of ETAAS for providing size information of nanoparticles. The calibration plot between the time at maximum absorbance and the particle size was applied to estimate the particle size of in-house synthesized AuNPs and AgNPs and the results obtained were in good agreement with those from flow field-flow fractionation (FlFFF) and transmission electron microscopy (TEM) techniques. Furthermore, the linear relationship between the activation energy and the particle size was observed. Copyright © 2017 Elsevier B.V. All rights reserved.

  15. Higher‐order mode absorption measurement of X-band choke-mode cavities in a radial line structure

    Energy Technology Data Exchange (ETDEWEB)

    Zha, Hao [Department of Engineering Physics, Tsinghua University, Beijing CN-100086 (China); Key Laboratory of Particle and Radiation Imaging, Tsinghua University, Ministry of Education, Beijing (China); The European Organization for Nuclear Research, Geneva CH-1211 (Switzerland); Shi, Jiaru, E-mail: shij@mail.tsinghua.edu.cn [Department of Engineering Physics, Tsinghua University, Beijing CN-100086 (China); Key Laboratory of Particle and Radiation Imaging, Tsinghua University, Ministry of Education, Beijing (China); The European Organization for Nuclear Research, Geneva CH-1211 (Switzerland); Wu, Xiaowei; Chen, Huaibi [Department of Engineering Physics, Tsinghua University, Beijing CN-100086 (China); Key Laboratory of Particle and Radiation Imaging, Tsinghua University, Ministry of Education, Beijing (China)

    2016-04-01

    An experiment is presented to study the higher-order mode (HOM) suppression of X-band choke-mode structures with a vector network analyzer (VNA). Specific radial line disks were built to test the reflection from the corresponding damping load and different choke geometries. The mismatch between the radial lines and the VNA was calibrated through a special multi-short-load calibration method. The measured reflections of different choke geometries showed good agreement with the theoretical calculations and verified the HOM absorption feature of each geometric design.

  16. Higher-order mode absorption measurement of X-band choke-mode cavities in a radial line structure

    Science.gov (United States)

    Zha, Hao; Shi, Jiaru; Wu, Xiaowei; Chen, Huaibi

    2016-04-01

    An experiment is presented to study the higher-order mode (HOM) suppression of X-band choke-mode structures with a vector network analyzer (VNA). Specific radial line disks were built to test the reflection from the corresponding damping load and different choke geometries. The mismatch between the radial lines and the VNA was calibrated through a special multi-short-load calibration method. The measured reflections of different choke geometries showed good agreement with the theoretical calculations and verified the HOM absorption feature of each geometric design.

  17. Absorption lines from magnetically driven winds in X-ray binaries

    Science.gov (United States)

    Chakravorty, S.; Petrucci, P.-O.; Ferreira, J.; Henri, G.; Belmont, R.; Clavel, M.; Corbel, S.; Rodriguez, J.; Coriat, M.; Drappeau, S.; Malzac, J.

    2016-05-01

    Context. High resolution X-ray spectra of black hole X-ray binaries (BHBs) show blueshifted absorption lines suggesting the presence of outflowing winds. Furthermore, observations show that the disk winds are equatorial and they occur in the Softer (disk dominated) states of the outburst and are less prominent or absent in the Harder (power-law dominated) states. Aims: We want to test whether the self-similar magneto-hydrodynamic (MHD) accretion-ejection models can explain the observational results for accretion disk winds in BHBs. In our models, the density at the base of the outflow from the accretion disk is not a free parameter. This mass loading is determined by solving the full set of dynamical MHD equations without neglecting any physical term. Thus, the physical properties of the outflow depend on and are controlled by the global structure of the disk. Methods: We studied different MHD solutions characterized by different values of the disk aspect ratio (ɛ) and the ejection efficiency (p). We also generate two kinds of MHD solutions depending on the absence (cold solution) or presence (warm solution) of heating at the disk surface. Such heating could be either from dissipation of energy due to MHD turbulence in the disk or from illumination of the disk surface. Warm solutions can have large (>0.1) values of p, which would imply larger wind mass loading at the base of the outflow. We use each of these MHD solutions to predict the physical parameters (distance, density, velocity, magnetic field, etc.) of an outflow. Motivated by observational results, we have put limits on the ionization parameter (ξ), column density, and timescales. Further constraints were derived for the allowed values of ξ from thermodynamic instability considerations, particularly for the Hard SED. These physical constraints were imposed on each of these outflows to select regions within it, which are consistent with the observed winds. Results: The cold MHD solutions are found to be

  18. Internet Teaching By Style: Profiling the On-line Professor

    Directory of Open Access Journals (Sweden)

    Sharon Strand

    2000-01-01

    Full Text Available The goal of this article is to offer the results of a pilot study which examined the personality type and teaching style preferences of faculty who elected to teach an on-line course. The article will present a description of personality assessments, including the Myers-Briggs Type Indicator (MBTI and Anthony Gregorc's Transaction Ability Inventory used to determine teaching tendencies and styles. In addition, a structured written questionnaire developed by the researchers was used to assess teacher satisfaction with worldwide web-based instruction. Utilizing the results of these psychological assessments, a preliminary analysis of the personal characteristics of college professors who chose to teach on line will be presented. This pilot study found that some preferred teaching styles may be more compatible with the dynamics of distance learning formats. By determining successful teaching styles for on-line courses, we can develop more effective faculty development programs to assist others in successfully transitioning into the cyber-teaching and learning environment.

  19. Stokes profile analysis and vector magnetic fields. I. Inversion of photospheric lines

    International Nuclear Information System (INIS)

    Skumanich, A.; Lites, B.W.

    1987-01-01

    Improvements are proposed for the Auer et al. (1977) method for the analytic inversion of Stokes profiles via nonlinear least squares. The introduction of additional physics into the Mueller absorption matrix (by including damping wings and magnetooptical birefringence, and by decoupling the intensity profile from the three-vector polarization profile in the analysis) is found to result in a more robust inversion method, providing more reliable and accurate estimates of sunspot vector magnetic fields without significant loss of economy. The method is applied to sunspot observations obtained with the High Altitude Observatory polarimeter. 29 references

  20. Microbial Community Profile of a Lead Service Line Removed from a Drinking Water Distribution System▿

    Science.gov (United States)

    White, Colin; Tancos, Matthew; Lytle, Darren A.

    2011-01-01

    A corroded lead service line was removed from a drinking water distribution system, and the microbial community was profiled using 16S rRNA gene techniques. This is the first report of the characterization of a biofilm on the surface of a corroded lead drinking water service line. The majority of phylotypes have been linked to heavy-metal-contaminated environments. PMID:21652741

  1. Quantitative depth profiling of photoacid generators in photoresist materials by near-edge X-ray absorption fine structure spectroscopy

    International Nuclear Information System (INIS)

    Prabhu, Vivek M.; Sambasivan, Sharadha; Fischer, Daniel; Sundberg, Linda K.; Allen, Robert D.

    2006-01-01

    Near-edge X-ray absorption fine structure (NEXAFS) spectroscopy was used to quantify the surface composition and depth profiling of photoacid generators in thin film photoresist materials by varying the entrance-grid bias of a partial electron yield detector. By considering model compositional profiles, NEXAFS distinguishes the surface molar excess within the top 6 nm from the bulk. A surface enriched system, triphenylsulfonium perfluorooctanesulfonate, is contrasted with a perfluorobutanesulfonate photoacid generator, which displays an appreciable surface profile within a 6 nm segregation length scale. These results, while applied to 193-nm photoresist materials, highlight a general approach to quantify NEXAFS partial electron yield data

  2. The evolution of HI and CIV quasar absorption line systems at 1.9 < z < 3.2

    OpenAIRE

    Kim, Tae-Sun; Partl, Adrian M.; Carswell, Robert F.; Müller, Volker

    2013-01-01

    We have investigated the distribution and evolution of ~3100 intergalactic HI absorbers with HI column densities log N(HI) = [12.75, 17.0] at 1.9 < z < 3.2, using 18 high resolution, high S/N quasar spectra obtained from the ESO VLT/UVES archive. We used two sets of Voigt profile fitting analysis, one including all the available high-order Lyman lines to obtain reliable HI column densities of saturated lines, and another using only the Ly-alpha lines. There is no significant difference betwee...

  3. Interstellar absorption lines in high-resolution IUE spectra of cataclysmic variables

    International Nuclear Information System (INIS)

    Mauche, C.W.; Raymond, J.C.; Cordova, F.A.

    1988-01-01

    High-resolution ultraviolet spectra of five cataclysmic variables obtained with the IUE are used to investigate the character of the interstellar medium in the vicinity of the sun. These spectra reveal narrow absorption features of neutral and singly ionized interstellar species, and, in SS Cyg, narrow velocity-shifted absorption features of C IV, Si IV, and Si III. Using the column densities implied by the absorption features of the neutral and singly ionized species, values for the depletion of Si, Mg, Mn, and Fe from the gas phase of the interstellar medium in the vicinity of the sun are obtained. These hydrogen column densities are of particular importance in constraining the soft X-ray luminosity of cataclysmic variables because of the severe attenuation of the soft X-ray flux of cataclysmic variables by photoelectric absorption in the interstellar medium. In addition, using the column densities implied by the absorption features of C IV, Si IV, and Si III in the spectrum of SS Cyg, the existence of an expanding H II region of interstellar gas photoionized by he EUV and soft X-ray flux of this cataclysmic variable are inferred. 78 references

  4. Potential and electric field profiles for transmission line insulators

    Energy Technology Data Exchange (ETDEWEB)

    Reddy, S.B.; Kumar, U. [Indian Inst. of Science, Bangalore (India). Dept. of Electrical Engineering, High Voltage Laboratory

    2008-07-01

    Overhead transmission lines are used to transmit bulk power at high voltages over very long distances. The objective of this study was to deduce accurate quantitative data on electrical stress distribution on 6 commonly used porcelain insulator strings. Both single disc and 15 disc strings corresponding to 220 kV line were considered. Both volume and surface electrical stresses along the porcelain-to-air and cement-to-air interfaces were deduced. The prevailing stress during laboratory pollution tests was also evaluated. A quantitative comparison of the stresses across commonly used insulators was also carried out. A numerical approach was used since the use of analytical methods for the required field solution was impractical because the geometry does not fit into any of the orthogonal curvilinear coordinates. In this study, the governing field was electrostatic under clean conditions and steady conduction under polluted conditions. Therefore the governing field equation was Laplacian, with complex permittivity for combined fields. 12 refs., 2 tabs., 13 figs.

  5. Beam profile monitor system for the bevalac transfer line

    International Nuclear Information System (INIS)

    Stover, G.

    1985-01-01

    Incorporated in the current Bevalac transfer line upgrade project is a proposal for a new electronic beam monitoring system. It will be designed to amplify, convert, and transmit the signals of twelve 16 by 16 multi-wire grids to a central computer located in the Bevatron control room. Each station will contain interface amplifiers and a local microprocessor to convert wire grid currents into digitized values which will then be transmitted via a serial data channel to the main computer. The system will have a large dynamic range (1 nano to 1 milli-ampere of beam current), be designed for distributed operation, and will be easily expandable. This paper describes the basic electronic hardware and software components of the proposed system

  6. Time-dependent excitation and ionization modelling of absorption-line variability due to GRB080310

    DEFF Research Database (Denmark)

    Vreeswijk, P.M.; De Cia, A.; Jakobsson, P.

    2013-01-01

    We model the time-variable absorption of Feii, Feiii, Siii, Cii and Crii detected in Ultraviolet and Visual Echelle Spectrograph (UVES) spectra of gamma-ray burst (GRB) 080310, with the afterglow radiation exciting and ionizing the interstellar medium in the host galaxy at a redshift of z = 2.427...

  7. Narrow CIV lambda 1549A Absorption Lines in Moderate-Redshift Quasars

    DEFF Research Database (Denmark)

    Vestergaard, Marianne

    2002-01-01

    A large, high-quality spectral data base of well-selected, moderate-redshift radio-loud and radio-quiet quasars is used to characterize the incidence of narrow associated CIV lambda 1549 absorption, and how this may depend on some quasar properties, including radio-type. Preliminary results...

  8. Two Photon Absorption Laser Induced Fluorescence for Neutral Hydrogen Profile Measurements

    International Nuclear Information System (INIS)

    Scime, Earl E.

    2016-01-01

    The magnitude and spatial dependence of neutral density in magnetic confinement fusion experiments is a key physical parameter, particularly in the plasma edge. Modeling codes require precise measurements of the neutral density to calculate charge-exchange power losses and drag forces on rotating plasmas. However, direct measurements of the neutral density are problematic. In this work, we proposed to construct a laser-based diagnostic capable of providing spatially resolved measurements of the neutral density in the edge of plasma in the DIII-D tokamak. The diagnostic concept is based on two-photon absorption laser induced fluorescence (TALIF). By injecting two beams of 205 nm light (co or counter propagating), ground state hydrogen (or deuterium or tritium) can be excited from the n = 1 level to the n = 3 level at the location where the two beams intersect. Individually, the beams experience no absorption, and therefore have no difficulty penetrating even dense plasmas. After excitation, a fraction of the hydrogen atoms decay from the n = 3 level to the n = 2 level and emit photons at 656 nm (the H α line). Calculations based on the results of previous TALIF experiments in magnetic fusion devices indicated that a laser pulse energy of approximately 3 mJ delivered in 5 ns would provide sufficient signal-to-noise for detection of the fluorescence. In collaboration with the DIII-D engineering staff and experts in plasma edge diagnostics for DIII-D from Oak Ridge National Laboratory (ORNL), WVU researchers designed a TALIF system capable of providing spatially resolved measurements of neutral deuterium densities in the DIII-D edge plasma. The laser systems were specified, purchased, and assembled at WVU. The TALIF system was tested on a low-power hydrogen discharge at WVU and the plan was to move the instrument to DIII-D for installation in collaboration with ORNL researchers. After budget cuts at DIII-D, the DIII-D facility declined to support installation on their

  9. Two Photon Absorption Laser Induced Fluorescence for Neutral Hydrogen Profile Measurements

    Energy Technology Data Exchange (ETDEWEB)

    Scime, Earl E. [West Virginia Univ., Morgantown, WV (United States)

    2016-09-23

    The magnitude and spatial dependence of neutral density in magnetic confinement fusion experiments is a key physical parameter, particularly in the plasma edge. Modeling codes require precise measurements of the neutral density to calculate charge-exchange power losses and drag forces on rotating plasmas. However, direct measurements of the neutral density are problematic. In this work, we proposed to construct a laser-based diagnostic capable of providing spatially resolved measurements of the neutral density in the edge of plasma in the DIII-D tokamak. The diagnostic concept is based on two-photon absorption laser induced fluorescence (TALIF). By injecting two beams of 205 nm light (co or counter propagating), ground state hydrogen (or deuterium or tritium) can be excited from the n = 1 level to the n = 3 level at the location where the two beams intersect. Individually, the beams experience no absorption, and therefore have no difficulty penetrating even dense plasmas. After excitation, a fraction of the hydrogen atoms decay from the n = 3 level to the n = 2 level and emit photons at 656 nm (the Hα line). Calculations based on the results of previous TALIF experiments in magnetic fusion devices indicated that a laser pulse energy of approximately 3 mJ delivered in 5 ns would provide sufficient signal-to-noise for detection of the fluorescence. In collaboration with the DIII-D engineering staff and experts in plasma edge diagnostics for DIII-D from Oak Ridge National Laboratory (ORNL), WVU researchers designed a TALIF system capable of providing spatially resolved measurements of neutral deuterium densities in the DIII-D edge plasma. The laser systems were specified, purchased, and assembled at WVU. The TALIF system was tested on a low-power hydrogen discharge at WVU and the plan was to move the instrument to DIII-D for installation in collaboration with ORNL researchers. After budget cuts at DIII-D, the DIII-D facility declined to support

  10. An upper limit for water dimer absorption in the 750 nm spectral region and a revised water line list

    Directory of Open Access Journals (Sweden)

    A. J. L. Shillings

    2011-05-01

    Full Text Available Absorption of solar radiation by water dimer molecules in the Earth's atmosphere has the potential to act as a positive feedback effect for climate change. There seems little doubt from the results of previous laboratory and theoretical studies that significant concentrations of the water dimer should be present in the atmosphere, yet attempts to detect water dimer absorption signatures in atmospheric field studies have so far yielded inconclusive results. Here we report spectral measurements in the near-infrared around 750 nm in the expected region of the | 0〈f | 4〉b|0 〉 overtone of the water dimer's hydrogen-bonded OH stretching vibration. The results were obtained using broadband cavity ringdown spectroscopy (BBCRDS, a methodology that allows absorption measurements to be made under controlled laboratory conditions but over absorption path lengths representative of atmospheric conditions. In order to account correctly and completely for the overlapping absorption of monomer molecules in the same spectral region, we have also constructed a new list of spectral data (UCL08 for the water monomer in the 750–20 000 cm−1 (13 μm–500 nm range.

    Our results show that the additional lines included in the UCL08 spectral database provide an improved representation of the measured water monomer absorption in the 750 nm region. No absorption features other than those attributable to the water monomer were detected in BBCRDS experiments performed on water vapour samples containing dimer concentrations up to an order of magnitude greater than expected in the ambient atmosphere. The absence of detectable water dimer features leads us to conclude that, in the absence of significant errors in calculated dimer oscillator strengths or monomer/dimer equilibrium constants, the widths of any water dimer absorption features present around 750 nm are of the order of 100 cm−1 HWHM, and certainly greater

  11. The effect of an homogeneous magnetic field on the line profiles of hydrogen

    International Nuclear Information System (INIS)

    Nguyen, H.; Herman, L.; Drawin, H.W.

    1966-01-01

    The profiles of the hydrogen lines have been calculated taking into account the intermolecular electric field, the electronic collisions, and an external homogeneous magnetic field in which the plasma is imbedded. We considered electron densities N within the range 10 15 ≤ N ≤ 10 18 cm -3 and magnetic field strengths 5 gauss. These values cover practically most of the experimental conditions in which one is interested in the present state of research. In the present paper we only present the numerical results for the lines Ly-α, Ly-β and H-α. For very small magnetic fields our calculated line profiles coincide with the pure Stark profiles recently calculated by GRIEM, KOLB and SHEN (1960). With increasing magnetic fields, important deviations appear. The essential parameters for these deviations are, firstly: the direction of observation with regard to the direction of the magnetic field, and secondly: the ratio between the Zeeman splitting in a magnetic field only and the Stark splitting due to the mean intermolecular electric field. Experimental line profiles have been obtained using a linear discharge tube surrounded by an induction coil, the comparison of tie theoretical profiles with the experimental ones shows a satisfying agreement. The results for the lines originating from higher principal quantum numbers are actually exploited and will be communicated soon. (author) [fr

  12. Observation-based Model of Evolution of the Lyman-Alpha Line Profile During the Solar Cycle

    Science.gov (United States)

    Kowalska-Leszczyńska, I.; Bzowski, M.; Sokol, J. M.; Kubiak, M. A.

    2017-12-01

    Recent studies of interstellar neutral (ISN) hydrogen observed by the Interstellar Boundary Explorer (IBEX) suggested that present understanding of the radiation pressure acting on hydrogen atoms in the heliosphere should be revised. There is a significant discrepancy between theoretical predictions of the ISN H signal based on the currently used model of the solar Lyman-alpha profile and the signal due to interstellar neutral H observed by IBEX-Lo in energy range from 0.01 to 0.07 keV. We have developed a new model of evolution of the solar Lyman-alpha profile that takes into account all available observations of the full-disk solar Lyman-alpha profiles from SUMER/SOHO, provided by Lemaire et al. 2015, and covering practically the entire solar cycle. The model has three components that reproduce different features of the profile. The main shape of the emission line that is produced in the chromosphere is modelled by the Kappa function; the central reversal due to absorption in the transition region is modelled by the Gauss function; the spectral background is represented by the linear function. We verified that with this model, all of the individual profiles can be reproduced quite accurately. The profile for an arbitrary day is parameterized by just one parameter either the composite Lyman-alpha flux available from LASP or alternatively by the F10.7 solar radio flux, however we have noticed that the agreement of the model with the data is a little worse but still within the uncertainties of the data for the latter one The new model features potentially important differences in comparison with the model by Tarnopolski & Bzowski 2007, which was based on a limited set of observations. In addition to the model itself, we will demonstrate some consequences resulting from this model on predicted distributions of interstellar hydrogen in the inner heliosphere, as well as on probabilities of survival calculated for heliospheric energetic neutral atoms.

  13. Identification of MgII Absorption Line Systems from SDSS Quasar ...

    Indian Academy of Sciences (India)

    In the first step, the SDSS spectra are corrected for the Galactic extinction using the reddening map of Schlegel et al. (1998) and then shifted to its rest wave- length. In order to measure line parameters reliably, we choose those wavelength ranges as pseudo-continua, which are not affected by prominent emission lines.

  14. On the Origin of the Wide HI Absorption Line towards Sgr A

    Indian Academy of Sciences (India)

    2016-01-27

    Jan 27, 2016 ... The position-velocity diagrams do not reveal any diffuse feature which could be attributed to a large number of HI clouds along the line of sight to Sgr A*. Consequently, the wide line has no implications either to a global population of shocked HI clouds in the Galaxy or to the energetics of the interstellar ...

  15. On-line Incorporation of Cloud Point Extraction in Flame Atomic Absorption Spectrometric Determination of Silver

    OpenAIRE

    DALALI, Nasser; JAVADI, Nasrin; AGRAWAL, Yadvendra KUMAR

    2008-01-01

    A cloud point extraction method was incorporated into a flow injection system, coupled with flame atomic absorption spectrometry, for determination of trace amounts of silver. The analyte in the aqueous solution was acidified with 0.2 mol L-1 sulfuric acid and complexed with dithizone. The cloud point extraction was performed using the non-ionic surfactant Triton X-114. After obtaining the cloud point, the surfactant-rich phase containing the dithizonate complex was collected in a m...

  16. Spatial Variability in the Ratio of Interstellar Atomic Deuterium to Hydrogen. II. Observations toward γ2 Velorum and ζ Puppis by the Interstellar Medium Absorption Profile Spectrograph

    Science.gov (United States)

    Sonneborn, George; Tripp, Todd M.; Ferlet, Roger; Jenkins, Edward B.; Sofia, U. J.; Vidal-Madjar, Alfred; Woźniak, Prezemysław R.

    2000-12-01

    High-resolution far-ultraviolet spectra of the early-type stars γ2 Vel and ζ Pup were obtained to measure the interstellar deuterium abundances in these directions. The observations were made with the Interstellar Medium Absorption Profile Spectrograph (IMAPS) during the ORFEUS-SPAS II mission in 1996. IMAPS spectra cover the wavelength range 930-1150 Å with λ/Δλ~80,000. The interstellar D I features are resolved and cleanly separated from interstellar H I in the Lyδ and Lyɛ profiles of both sight lines and also in the Lyγ profile of ζ Pup. The D I profiles were modeled using a velocity template derived from several N I lines in the IMAPS spectra recorded at higher signal-to-noise ratio. To find the best D I column density, we minimized χ2 for model D I profiles that included not only the N(D I) as a free parameter, but also the effects of several potential sources of systematic error, which were allowed to vary as free parameters. H I column densities were measured by analyzing Lyα absorption profiles in a large number of IUE high-dispersion spectra for each of these stars and applying this same χ2-minimization technique. Ultimately we found that D/H=2.18+0.36-0.31×10-5 for γ2 Vel and 1.42+0.25-0.23×10-5 for ζ Pup, values that contrast markedly with D/H derived in Paper I for δ Ori A (the stated errors are 90% confidence limits). Evidently, the atomic D/H ratio in the ISM, averaged over path lengths of 250-500 pc, exhibits significant spatial variability. Furthermore, the observed spatial variations in D/H do not appear to be anticorrelated with N/H, one measure of heavy-element abundances. We briefly discuss some hypotheses to explain the D/H spatial variability. Within the framework of standard big bang nucleosynthesis, the large value of D/H found toward γ2 Vel is equivalent to a cosmic baryon density of ΩBh2=0.023+/-0.002, which we regard as an upper limit since there is no correction for the destruction of deuterium in stars. This paper is

  17. Intercomparison of ozone profiles measurements by a differential absorption lidar system and satellites at Buenos Aires, Argentina

    Science.gov (United States)

    Pazmino, Andrea F.; Wolfram, Elian; Quel, Eduardo J.; Lavorato, Mario; Piacentini, Ruben; Godin-Beekmann, Sophie M.; Porteneuve, Jacques; Megie, Gerard J.

    2001-08-01

    A ground-based differential Absorption Lidar (DIAL) system has been implemented at CEILAP laboratory, located in the Buenos Aires industrial suburbs, The goal was to perform measurements of the stratospheric ozone layer. Since early 199 systematic measurements of zone concentration profiles from approximately 18 to 35 km altitude are performed. Our measurements are carried out in 5 hours in average during the night and in cloudless conditions. The DIAL system allows us to calculate directly the ozone profile from the lidar backscattering radiation since it is a self- calibrating technique. The signals processing takes into account the influence of the temperature profile on the ozone cross section. The temperature data is obtained from the radiosondes measurements performed at Ezeira International Airport. The evolution of the stratospheric ozone profile is studied for different months. Results are compared with the data obtained by different satellites like SAGE II and HALOE. The spatial and temporal range of the satellites must be taken into account.

  18. On-line monitoring of odorant in natural gas mixtures of different composition by the infrared absorption spectroscopy method

    Science.gov (United States)

    Kireev, S. V.; Shnyrev, S. L.

    2018-03-01

    This paper reports on the results of research aimed at solving the problem of on-line monitoring of odorant in natural gas mixtures in order to make the odorization process effective and ensure the safety of main gas pipeline exploitation. Our results show that using the infrared absorption spectroscopy method is promising for this purpose. Using radiation sources operating in the spectral range 6–15 µm allows us to obtain an odorant detection sensitivity of approximately 5 ppm in gas mixtures of different composition.

  19. Digital signal processor-based high-precision on-line Voigt lineshape fitting for direct absorption spectroscopy.

    Science.gov (United States)

    Xu, Lijun; Liu, Chang; Zheng, Deyan; Cao, Zhang; Cai, Weiwei

    2014-12-01

    To realize on-line high-accuracy measurement in direct absorption spectroscopy (DAS), a system-on-chip, high-precision digital signal processor-based on-line Voigt lineshape fitting implementation is introduced in this paper. Given that the Voigt lineshape is determined by the Gauss full width at half maximum (FWHM) and Lorentz FWHM, a look-up table, which covers a range of combinations of both, is first built to achieve rapid and accurate calculation of Voigt lineshape. With the look-up table and raw absorbance data in hand, Gauss-Newton nonlinear fitting module is implemented to obtain the parameters including both the Gauss and Lorentz FWHMs, which can be used to calculate the integrated absorbance. To realize the proposed method in hardware, a digital signal processor (DSP) is adopted to fit the Voigt lineshape in a real-time DAS measurement system. In experiment, temperature and H2O concentration of a flat flame are recovered from the transitions of 7444.36 cm(-1) and 7185.6 cm(-1) by the DSP-based on-line Voigt lineshape fitting and on-line integral of the raw absorbance, respectively. The results show that the proposed method can not only fit the Voigt lineshape on-line but also improve the measurement accuracy compared with those obtained from the direct integral of the raw absorbance.

  20. BELINDA: Broadband Emission Lidar with Narrowband Determination of Absorption. A new concept for measuring water vapor and temperature profiles

    Science.gov (United States)

    Theopold, F. A.; Weitkamp, C.; Michaelis, W.

    1992-01-01

    We present a new concept for differential absorption lidar measurements of water vapor and temperature profiles. The idea is to use one broadband emission laser and a narrowband filter system for separation of the 'online' and 'offline' return signals. It is shown that BELINDA offers improvements as to laser emission shape and stability requirements, background suppression, and last and most important a significant reduction of the influence of Rayleigh scattering. A suitably designed system based on this concept is presented, capable of measuring water vapor or temperature profiles throughout the planetary boundary layer.

  1. A model for the vertical sound speed and absorption profiles in Titan's atmosphere based on Cassini-Huygens data.

    Science.gov (United States)

    Petculescu, Andi; Achi, Peter

    2012-05-01

    Measurements of thermodynamic quantities in Titan's atmosphere during the descent of Huygens in 2005 are used to predict the vertical profiles for the speed and intrinsic attenuation (or absorption) of sound. The calculations are done using one author's previous model modified to accommodate non-ideal equations of state. The vertical temperature profile places the tropopause about 40 km above the surface. In the model, a binary nitrogen-methane composition is assumed for Titan's atmosphere, quantified by the methane fraction measured by the gas chromatograph/mass spectrometer (GCMS) onboard Huygens. To more accurately constrain the acoustic wave number, the variation of thermophysical properties (specific heats, viscosity, and thermal conductivity) with altitude is included via data extracted from the NIST Chemistry WebBook [URL webbook.nist.gov, National Institute of Standards and Technology Chemistry WebBook (Last accessed 10/20/2011)]. The predicted speed of sound profile fits well inside the spread of the data recorded by Huygens' active acoustic sensor. In the N(2)-dominated atmosphere, the sound waves have negligible relaxational dispersion and mostly classical (thermo-viscous) absorption. The cold and dense environment of Titan can sustain acoustic waves over large distances with relatively small transmission losses, as evidenced by the small absorption. A ray-tracing program is used to assess the bounds imposed by the zonal wind-measured by the Doppler Wind Experiment on Huygens-on long-range propagation.

  2. Observations of far-infrared line profiles in the Orion-KL region

    International Nuclear Information System (INIS)

    Crawford, M.K.; Lugten, J.B.; Fitelson, W.; Genzel, R.; Melnick, G.; Harvard-Smithsonian Center for Astrophysics, Cambridge, MA)

    1986-01-01

    Measurements of several far-infrared emission line profiles in the Orion-KL region are reported. The emission from the CO, OH, and forbidden O I emission lines toward the BN-KL and H2 peak 1 positions probably comes from dense, hot molecular gas in the Orion-KL shock. The CO and forbidden O I lines have similar profiles, suggesting that the high-velocity forbidden O I emission also arises in magnetohydrodynamic cloud shocks. The velocity centroids of the lines are somewhat blueshifted. The far-infrared data thus support the interpretation that the blue asymmetry of the H2 2 micron lines is not mainly due to differential dust extinction, but rather to the kinematics and geometry of the shocked gas in the Orion-KL outflow. The forbidden O I and CO lines, however, have significantly less extreme blueshifted emission than the H2 lines. Both the forbidden O I 63 micron and forbidden C II 158 micron lines have features strongly supporting a common origin near the surface of the Orion molecular cloud. 28 references

  3. WEAK HARD X-RAY EMISSION FROM TWO BROAD ABSORPTION LINE QUASARS OBSERVED WITH NuSTAR: COMPTON-THICK ABSORPTION OR INTRINSIC X-RAY WEAKNESS?

    Energy Technology Data Exchange (ETDEWEB)

    Luo, B.; Brandt, W. N. [Department of Astronomy and Astrophysics, 525 Davey Lab, The Pennsylvania State University, University Park, PA 16802 (United States); Alexander, D. M.; Hickox, R. [Department of Physics, Durham University, South Road, Durham DH1 3LE (United Kingdom); Harrison, F. A.; Fuerst, F.; Grefenstette, B. W.; Madsen, K. K. [Cahill Center for Astronomy and Astrophysics, California Institute of Technology, Pasadena, CA 91125 (United States); Stern, D. [Jet Propulsion Laboratory, California Institute of Technology, Pasadena, CA 91109 (United States); Bauer, F. E. [Departamento de Astronomia y Astrofisica, Pontificia Universidad Catolica de Chile, Casilla 306, Santiago 22 (Chile); Boggs, S. E.; Craig, W. W. [Space Sciences Laboratory, University of California, Berkeley, CA 94720 (United States); Christensen, F. E. [DTU Space-National Space Institute, Technical University of Denmark, Elektrovej 327, DK-2800 Lyngby (Denmark); Comastri, A. [INAF-Osservatorio Astronomico di Bologna, Via Ranzani 1, I-40127 Bologna (Italy); Fabian, A. C. [Institute of Astronomy, Madingley Road, Cambridge CB3 0HA (United Kingdom); Farrah, D. [Department of Physics, Virginia Tech, Blacksburg, VA 24061 (United States); Fiore, F. [Osservatorio Astronomico di Roma, via Frascati 33, I-00040 Monteporzio Catone (Italy); Hailey, C. J. [Columbia Astrophysics Laboratory, Columbia University, New York, NY 10027 (United States); Matt, G. [Dipartimento di Matematica e Fisica, Universita degli Studi Roma Tre, via della Vasca Navale 84, I-00146 Roma (Italy); Ogle, P. [IPAC, California Institute of Technology, Mail Code 220-6, Pasadena, CA 91125 (United States); and others

    2013-08-01

    We present Nuclear Spectroscopic Telescope Array (NuSTAR) hard X-ray observations of two X-ray weak broad absorption line (BAL) quasars, PG 1004+130 (radio loud) and PG 1700+518 (radio quiet). Many BAL quasars appear X-ray weak, probably due to absorption by the shielding gas between the nucleus and the accretion-disk wind. The two targets are among the optically brightest BAL quasars, yet they are known to be significantly X-ray weak at rest-frame 2-10 keV (16-120 times fainter than typical quasars). We would expect to obtain Almost-Equal-To 400-600 hard X-ray ({approx}> 10 keV) photons with NuSTAR, provided that these photons are not significantly absorbed (N{sub H} {approx}< 10{sup 24} cm{sup -2}). However, both BAL quasars are only detected in the softer NuSTAR bands (e.g., 4-20 keV) but not in its harder bands (e.g., 20-30 keV), suggesting that either the shielding gas is highly Compton-thick or the two targets are intrinsically X-ray weak. We constrain the column densities for both to be N{sub H} Almost-Equal-To 7 Multiplication-Sign 10{sup 24} cm{sup -2} if the weak hard X-ray emission is caused by obscuration from the shielding gas. We discuss a few possibilities for how PG 1004+130 could have Compton-thick shielding gas without strong Fe K{alpha} line emission; dilution from jet-linked X-ray emission is one likely explanation. We also discuss the intrinsic X-ray weakness scenario based on a coronal-quenching model relevant to the shielding gas and disk wind of BAL quasars. Motivated by our NuSTAR results, we perform a Chandra stacking analysis with the Large Bright Quasar Survey BAL quasar sample and place statistical constraints upon the fraction of intrinsically X-ray weak BAL quasars; this fraction is likely 17%-40%.

  4. The role of radiative acceleration in outflows from broad absorption line QSOs. 1: Comparison with O star winds

    Science.gov (United States)

    Arav, Nahum; Li, Zhi-Yun

    1994-01-01

    We investigate the role of radiation pressure in accelerating the broad absorption line (BAL) outflows in QSOs by comparing their properties with those of radiatively driven O star winds. We find that, owing to their lower column densities and higher velocity spreads, BAL outflows have only a few tens of strong resonance lines that are dynamically important, as compared with 10(exp 3) - 10(exp 4) lines in O star winds. We show that the combined radiative force (the 'force multiplier') declines more rapidly as a function of column density for BAL outflows than for O star winds. This is mainly attributed to the absence of lines from excited states in the BAL region. The absorbing gas in BAL outflows must have a small filling factor in order for radiative acceleration to be important dynamically. This allows the absorbing material to remain at a high enough density to maintain the ion species necessary for efficient radiative acceleration as well (as those responsible for the observed absorption), without the average flow density becoming so large that the absorbing matter cannot be accelerated by an increment larger than its own sound speed. The latter condition is necessary if the outflow is to tap a large portion of the incident photon momentum. Once a small filling factor is assumed, radiative acceleration can be more efficient in BAL outflows than in O stars. We show that terminal velocities of a few times 10(exp 4) km/sec can be expected, provided that the absorbing matter does not have to drag with it a much heavier substrate.

  5. STRONG FIELD EFFECTS ON EMISSION LINE PROFILES: KERR BLACK HOLES AND WARPED ACCRETION DISKS

    International Nuclear Information System (INIS)

    Wang Yan; Li Xiangdong

    2012-01-01

    If an accretion disk around a black hole is illuminated by hard X-rays from non-thermal coronae, fluorescent iron lines will be emitted from the inner region of the accretion disk. The emission line profiles will show a variety of strong field effects, which may be used as a probe of the spin parameter of the black hole and the structure of the accretion disk. In this paper, we generalize the previous relativistic line profile models by including both the black hole spinning effects and the non-axisymmetries of warped accretion disks. Our results show different features from the conventional calculations for either a flat disk around a Kerr black hole or a warped disk around a Schwarzschild black hole by presenting, at the same time, multiple peaks, rather long red tails, and time variations of line profiles with the precession of the disk. We show disk images as seen by a distant observer, which are distorted by the strong gravity. Although we are primarily concerned with the iron K-shell lines in this paper, the calculation is general and is valid for any emission lines produced from a warped accretion disk around a black hole.

  6. Indium determination by spectral overlappings of lines in atomic absorption spectrometry

    International Nuclear Information System (INIS)

    Gomez, J.J.; Huicque, L. d'; Garcia Vior, L.O.

    1991-01-01

    A molybdenum hollow-cathode lamp filled with neon can be used to determine indium. Characteristic concentration for this element is 4.5 mg/L in the 325 nm spectral region for the Mo(I) 325.621 nm line. In addition, values of 0.4 mg/L and 0.3 mg/L are obtained with the Mo(I) 410.215 nm and Ne(I) 451.151 nm lines, respectively. These spectral overlappings allow the determination of indium in silver-cadmium-indium alloys. (Author) [es

  7. On-line determination of thermophysical properties in an absorption calorimeter

    Science.gov (United States)

    Otieno, F. O.; Kola, B. O.; Onyango, F. N.

    1997-03-01

    A Microsoft FORTRAN 77 algorithm for calculation of the thermal absorptance 0957-0233/8/3/004/img1 and emittance 0957-0233/8/3/004/img2 of materials for solar photothermal applications is presented. It replaces the Mathematica software package used for an earlier paper and uses data from sample heating and cooling histories obtained in an absorption calorimeter. The calorimeter is automated with a Z80 microprocessor system, which has an operating system (OS) and control programs resident in a block of type 2716 EPROMs with a working memory comprising Hitachi type 6116 static RAMs. The 0957-0233/8/3/004/img3 system acquires data from the sample through thermocouples, filters, amplifiers and analogue-to-digital signal converters (ADCs) for temporary storage in the on-board RAM. The raw data are uploaded to an IBM PS/2 microcomputer for display and processing. Solutions of heat balance equations of the calorimeter are computed from the transient temperature history data using analytical and numerical methods. Results obtained for commercial copper and aluminium samples using a 60 W tungsten - halogen lamp are discussed. They compare well with those from the Mathematica package.

  8. Investigating the reasons of variability in Si IV and C IV broad absorption line troughs of quasars

    Science.gov (United States)

    Stathopoulos, Dimitrios; Lyratzi, Evangelia; Danezis, Emmanuel; Antoniou, Antonios; Tzimeas, Dimitrios

    2017-09-01

    In this paper we analyze the C IV and Si IV broad absorption troughs of two BALQSOs (J101056.69+355833.3, J114548.38+393746.6) to the individual components they consist of. By analyzing a BAL trough to its components we have the advantage to study the variations of the individual absorbing systems in the line of sight and not just the variations of the whole absorption trough or the variations of selected portions of BAL troughs exhibiting changes. We find that the velocity shifts and FWHMs (Full Width at Half Maximum) of the individual components do not vary between an interval of six years. All variable components show changes in the optical depths at line centers which are manifested as variations in the EW (Equivalent Width) of the components. In both BALQSOs, over corresponding velocities, Si IV has higher incidence of variability than C IV. From our analysis, evidence is in favour of different covering fractions between C IV and Si IV. Finally, although most of our results favour the crossing cloud scenario as the cause of variability, there is also strong piece of evidence indicating changing ionization as the source of variability. Thus, a mixed situation where both physical mechanisms contribute to BAL variability is the most possible scenario.

  9. A High Galactic Latitude HI 21 cm-line Absorption Survey using the ...

    Indian Academy of Sciences (India)

    R. Narasimhan (Krishtel eMaging) 1461 1996 Oct 15 13:05:22

    observed radial velocity arising from Galaxy's rotation is unknown. Therefore, the lower Galactic latitudes are not .... In the figure, the lower panel is the Galactic rotation curve for the given line of sight obtained from the Galactic rotation model by Brand ... We thank the staff of the GMRT who made these observations possible.

  10. The SLUGGS survey: globular cluster stellar population trends from weak absorption lines in stacked spectra

    Science.gov (United States)

    Usher, Christopher; Forbes, Duncan A.; Brodie, Jean P.; Romanowsky, Aaron J.; Strader, Jay; Conroy, Charlie; Foster, Caroline; Pastorello, Nicola; Pota, Vincenzo; Arnold, Jacob A.

    2015-01-01

    As part of the SAGES Legacy Unifying Globulars and GalaxieS (SLUGGS) survey, we stack 1137 Keck DEIMOS (Deep Imaging Multi-Object Spectrograph) spectra of globular clusters from 10 galaxies to study their stellar populations in detail. The stacked spectra have median signal-to-noise ratios of ˜90 Å-1. Besides the calcium triplet, we study weaker sodium, magnesium, titanium and iron lines as well as the Hα and higher order Paschen hydrogen lines. In general, the stacked spectra are consistent with old ages and a Milky Way-like initial mass function. However, we see different metal line index strengths at fixed colour and magnitude, and differences in the calcium triplet-colour relation from galaxy to galaxy. We interpret this as strong evidence for variations in the globular cluster colour-metallicity relation between galaxies. Two possible explanations for the colour-metallicity relation variations are that the average ages of globular clusters vary from galaxy to galaxy or that the average abundances of light elements (i.e. He, C, N and O) differ between galaxies. Stacking spectra by magnitude, we see that the colours become redder and metal line indices stronger with brighter magnitudes. These trends are consistent with the previously reported `blue tilts' being mass-metallicity relations.

  11. A Two-Line Absorption Instrument for Scramjet Temperature and Water Vapor Concentration Measurement in HYPULSE

    Science.gov (United States)

    Tsai, C. Y.

    1998-01-01

    A three beam water vapor sensor system has been modified to provide for near simultaneous temperature measurement. The system employs a tunable diode laser to scan spectral line of water vapor. The application to measurements in a scramjet combustor environment of a shock tunnel facility is discussed. This report presents and discusses die initial calibration of the measurement system.

  12. H α and H β Raman scattering line profiles of the symbiotic star AG Pegasi

    Science.gov (United States)

    Lee, Seong-Jae; Hyung, Siek

    2018-04-01

    The H α and H β line profiles of the symbiotic star AG Pegasi, observed in 1998 September (phase ϕ = 10.24), display top narrow double Gaussian components and bottom broad components (FWHM = 200-400 km s-1). The photoionization model indicates that the ionized zone, responsible for the hydrogen Balmer and Lyman lines, is radiation-bounded, with a hydrogen gas number density of nH ˜ 109.85 cm-3 and a gas temperature of Te = 12 000-15 000 K. We have carried out Monte Carlo simulations to fit the Raman scattering broad wings, assuming that the hydrogen Ly β and Ly γ lines emitted within the radiation-bounded H II zone around a white dwarf have the same double Gaussian line profile shape as the hydrogen Balmer lines. The simulation shows that the scattering H I zones are attached to (or located just outside) the inner H II shells. The best fit to the observed broad H I line profiles indicates that the column density of the scattering neutral zone is NH ≃ 3-5 × 1019 cm-2. We have examined whether the geometrical structure responsible for the observed H α and H β line profiles is a bipolar conical shell structure, consisting of the radiation-bounded ionized zone and the outer material bounded neutral zone. The expanding bipolar structure might be two opposite regions of the common envelope or the outer shell of the Roche lobe around the hot white dwarf, formed through the mass inflows from the giant star and pushed out by the fast winds from the hot white dwarf.

  13. OBSERVATIONS AND SIMULATIONS OF THE Na i D{sub 1} LINE PROFILES IN AN M-CLASS SOLAR FLARE

    Energy Technology Data Exchange (ETDEWEB)

    Kuridze, D.; Mathioudakis, M.; Jess, D. B.; Grant, S. D. T.; Kawate, T.; Keenan, F. P. [Astrophysics Research Centre, School of Mathematics and Physics, Queen’s University Belfast, Belfast BT7 1NN (United Kingdom); Christian, D. J. [Department of Physics and Astronomy, California State University, Northridge, CA 91330 (United States); Kowalski, A. F.; Allred, J. C. [NASA/Goddard Space Flight Center, Code 671, Greenbelt, MD 20771 (United States); Simões, P. J. A. [SUPA School of Physics and Astronomy, University of Glasgow, Glasgow G12 8QQ (United Kingdom)

    2016-12-01

    We study the temporal evolution of the Na i D{sub 1} line profiles in the M3.9 flare SOL2014-06-11T21:03 UT, using observations at high spectral resolution obtained with the Interferometric Bidimensional Spectrometer instrument on the Dunn Solar Telescope combined with radiative hydrodynamic simulations. Our results show a significant increase in the intensities of the line core and wings during the flare. The analysis of the line profiles from the flare ribbons reveals that the Na i D{sub 1} line has a central reversal with excess emission in the blue wing (blue asymmetry). We combine RADYN and RH simulations to synthesize Na i D{sub 1} line profiles of the flaring atmosphere and find good agreement with the observations. Heating with a beam of electrons modifies the radiation field in the flaring atmosphere and excites electrons from the ground state 3s {sup 2}S to the first excited state 3p {sup 2}P, which in turn modifies the relative population of the two states. The change in temperature and the population density of the energy states make the sodium line profile revert from absorption into emission. Furthermore, the rapid changes in temperature break the pressure balance between the different layers of the lower atmosphere, generating upflow/downflow patterns. Analysis of the simulated spectra reveals that the asymmetries of the Na i D{sub 1} flare profile are produced by the velocity gradients in the lower solar atmosphere.

  14. Gene expression profile of colon cancer cell lines treated with SN-38

    DEFF Research Database (Denmark)

    Wallin, A; Francis, P; Nilbert, M

    2010-01-01

    the incidence in fact has increased. To improve chemotherapy and enable personalised treatment, the need of biomarkers is of great significance. In this study, we evaluated the gene expression profiles of the colon cancer cell lines treated with SN-38, the active metabolite of topoisomerase-1 inhibitor...

  15. Temporal Variation of Ca–K Line Profile of the Sun during the Solar ...

    Indian Academy of Sciences (India)

    2016-01-27

    Jan 27, 2016 ... We obtained the Ca–K line profile of the Sun as a star since 1969 at the Kodaikanal Observatory (KO) and analysis of the data showed the need to delineate the role of different chromospheric features to the variations of solar irradiance. We, therefore, initiated a new methodology to make observations of ...

  16. Protein profile of human hepatocarcinoma cell line SMMC-7721: Identification and functional analysis

    OpenAIRE

    Feng, Yi; Tian, Zhong-Min; Wan, Ming-Xi; Zheng, Zhao-Bin

    2007-01-01

    AIM: To investigate the protein profile of human hepatocarcinoma cell line SMMC-7721, to analyze the specific functions of abundant expressed proteins in the processes of hepatocarcinoma genesis, growth and metastasis, to identify the hepatocarcinoma-specific biomarkers for the early prediction in diagnosis, and to explore the new drug targets for liver cancer therapy.

  17. X-Raying the Ultraluminous Infrared Starburst Galaxy and Broad Absorption Line QSO Markarian 231 with Chandra

    Science.gov (United States)

    Gallagher, S. C.; Brandt, W. N.; Chartas, G.; Garmire, G. P.; Sambruna, R. M.

    2002-01-01

    With 40 ks of Clzandra ACIS-S3 exposure, new information on both the starburst and QSO components of the X-ray emission of Markarian 231, an ultraluminous infrared galaxy and broad absorption line QSO, has been obtained. The bulk of the X-ray luminosity is emitted from an unresolved nuclear point source, and the spectrum is remarkably hard, with the majority of the flux emitted above 2 keV. Most notably, significant nuclear variability (a decrease of -45% in approximately 6 hr) at energies above 2 keV indicates that Chuizdra has probed within light-hours of the central black hole. Although we concur with Maloney & Reynolds that the direct continuum is not observed, this variability coupled with the 188 eV upper limit on the equivalent width of the Fe K o emission line argues against the reflection-dominated model put forth by these authors based on their ASCA data. Instead, we favor a model in which a small, Compton-thick absorber blocks the direct X-rays, and only indirect, scattered X-rays from multiple lines of sight can reach the observer. Extended soft, thermal emission encompasses the optical extent of the galaxy and exhibits resolved structure. An off-nuclear X-ray source with a 0.35-8.0 keV luminosity of Lx = 7 x 10 sup39 ergs s sup -1 , consistent with the ultraluminous X-ray sources in other nearby starbursts, is detected. We also present an unpublished Faint Object Spectrograph spectrum from the Hirhhle Spuce Telescope archive showing the broad C IV absorption.

  18. Line profiles of hydrogenic ions from high-temperature and high-density plasmas

    International Nuclear Information System (INIS)

    Hou Qing; Li Jianming

    1991-01-01

    Applying the Hooper's first-order theory, the authors calculate the static micro-electric field distributions in plasmas containing various multiply-charged ions. The influences of the impurity concentrations on the micro electric field distributions and on the Lyman profiles (n→1) from hydrogenic ions are analysed. Based on the optical-thin line profiles, the radiation transfer equation in sphere plasmas with various optical depths is solved. The results confirm that the opacity-broadening of the line profiles has almost no effect on the separation of Lyman β splitted peaks. Such separation is determined by electric field at which the static micro-electric field distribution has a maximum. The separation can be utilized for spatially resolved and temporally resolved density diagnostic of fusion plasmas

  19. Absorption Profile of (PolyPhenolic Compounds after Consumption of Three Food Supplements Containing 36 Different Fruits, Vegetables, and Berries

    Directory of Open Access Journals (Sweden)

    Letizia Bresciani

    2017-02-01

    Full Text Available The market of plant-based nutraceuticals and food supplements is continuously growing due to the increased consumer demand. The introduction of new products with relevant nutritional characteristics represents a new way of providing bioactive compounds and (polyphenols to consumers, becoming a strategy to ideally guarantee the health benefits attributed to plant foodstuffs and allowing the increase of daily bioactive compound intake. A paramount step in the study of nutraceuticals is the evaluation of the bioavailability and metabolism of their putatively active components. Therefore, the aim of the present study was to investigate the absorption profile of the (polyphenolic compounds contained in three different plant-based food supplements, made of 36 different plant matrices, which were consumed by 20 subjects in an open one-arm study design. Blood samples were collected at baseline and 1, 2, 5, and 10 h after capsule intake. Twenty quantifiable metabolites deriving from different (polyphenolic compounds were identified. Results showed that the consumption of the three capsules allowed the effective absorption of several (polyphenolic compounds and metabolites appearing at different times in plasma, thereby indicating different absorption profiles. The capsules thus ensured potential health-promoting molecules to be potentially available to target tissues and organs.

  20. Absorption Profile of (Poly)Phenolic Compounds after Consumption of Three Food Supplements Containing 36 Different Fruits, Vegetables, and Berries.

    Science.gov (United States)

    Bresciani, Letizia; Martini, Daniela; Mena, Pedro; Tassotti, Michele; Calani, Luca; Brigati, Giacomo; Brighenti, Furio; Holasek, Sandra; Malliga, Daniela-Eugenia; Lamprecht, Manfred; Del Rio, Daniele

    2017-02-26

    The market of plant-based nutraceuticals and food supplements is continuously growing due to the increased consumer demand. The introduction of new products with relevant nutritional characteristics represents a new way of providing bioactive compounds and (poly)phenols to consumers, becoming a strategy to ideally guarantee the health benefits attributed to plant foodstuffs and allowing the increase of daily bioactive compound intake. A paramount step in the study of nutraceuticals is the evaluation of the bioavailability and metabolism of their putatively active components. Therefore, the aim of the present study was to investigate the absorption profile of the (poly)phenolic compounds contained in three different plant-based food supplements, made of 36 different plant matrices, which were consumed by 20 subjects in an open one-arm study design. Blood samples were collected at baseline and 1, 2, 5, and 10 h after capsule intake. Twenty quantifiable metabolites deriving from different (poly)phenolic compounds were identified. Results showed that the consumption of the three capsules allowed the effective absorption of several (poly)phenolic compounds and metabolites appearing at different times in plasma, thereby indicating different absorption profiles. The capsules thus ensured potential health-promoting molecules to be potentially available to target tissues and organs.

  1. High resolution measurements and modeling of auroral hydrogen emission line profiles

    Directory of Open Access Journals (Sweden)

    B. S. Lanchester

    2003-07-01

    Full Text Available Measurements in the visible wavelength range at high spectral resolution (1.3 Å have been made at Longyearbyen, Svalbard (15.8 E,78.2 N during an interval of intense proton precipitation. The shape and Doppler shift of hydrogen Balmer beta line profiles have been compared with model line profiles, using as input ion energy spectra from almost coincident passes of the FAST and DMSP spacecraft. The comparison shows that the simulation contains the important physical processes that produce the profiles, and confirms that measured changes in the shape and peak wave-length of the hydrogen profiles are the result of changing energy input. This combination of high resolution measurements with modeling provides a method of estimating the incoming energy and changes in flux of precipitating protons over Svalbard, for given energy and pitch-angle distributions. Whereas for electron precipitation, information on the incident particles is derived from brightness and brightness ratios which require at least two spectral windows, for proton precipitation the Doppler profile of resulting hydrogen emission is directly related to the energy and energy flux of the incident energetic protons and can be used to gather information about the source region. As well as the expected Doppler shift to shorter wavelengths, the measured profiles have a significant red-shifted component, the result of upward flowing emitting hydrogen atoms.Key words. Ionosphere (auroral ionosphere; particle precipitation – Magnetospheric physics (auroral phenomena

  2. High resolution measurements and modeling of auroral hydrogen emission line profiles

    Directory of Open Access Journals (Sweden)

    B. S. Lanchester

    Full Text Available Measurements in the visible wavelength range at high spectral resolution (1.3 Å have been made at Longyearbyen, Svalbard (15.8 E,78.2 N during an interval of intense proton precipitation. The shape and Doppler shift of hydrogen Balmer beta line profiles have been compared with model line profiles, using as input ion energy spectra from almost coincident passes of the FAST and DMSP spacecraft. The comparison shows that the simulation contains the important physical processes that produce the profiles, and confirms that measured changes in the shape and peak wave-length of the hydrogen profiles are the result of changing energy input. This combination of high resolution measurements with modeling provides a method of estimating the incoming energy and changes in flux of precipitating protons over Svalbard, for given energy and pitch-angle distributions. Whereas for electron precipitation, information on the incident particles is derived from brightness and brightness ratios which require at least two spectral windows, for proton precipitation the Doppler profile of resulting hydrogen emission is directly related to the energy and energy flux of the incident energetic protons and can be used to gather information about the source region. As well as the expected Doppler shift to shorter wavelengths, the measured profiles have a significant red-shifted component, the result of upward flowing emitting hydrogen atoms.

    Key words. Ionosphere (auroral ionosphere; particle precipitation – Magnetospheric physics (auroral phenomena

  3. Study of the Many Fluorescent Lines and the Absorption Variability in GX 301-2 with XMM-Newton

    Science.gov (United States)

    Fuerst, F.; Suchy, S.; Kreykenbohm, I.; Barragan, L.; Wilms, J.; Pottschmidt, K.; Caballero, I.; Kretschmar, P.; Ferrigno, C.; Rothschild, R. E.

    2011-01-01

    We present an in-depth study of the High Mass X-ray Binary (HMXB) GX 301-2 during its pre-periastron flare using data from the XMM-Newton satellite. The energy spectrum shows a power law continuum absorbed by a large equivalent hydrogen column on the order of 10(exp 24)/ sq cm and a prominent Fe K-alpha fluorescent emission line. Besides the Fe K-alpha line, evidence for Fe K-Beta, Ni K-alpha, Ni K-Beta, S K-alpha, Ar K-alpha, Ca K-alpha, and Cr K-alpha fluorescent lines is found. The observed line strengths are consistent with fluorescence in a cold absorber. This is the first time that Cr K-alpha is seen in emission in the X-ray spectrum of a HMXB. In addition to the modulation by the strong pulse period of approx 685 sec the source is highly variable and shows different states of activity. We perform time-resolved as well as pulse-to-pulse resolved spectroscopy to investigate differences between these states of activity. We find that fluorescent line fluxes are strongly variable and generally follow the overall flux. The N-H value is variable by a factor of 2, but not correlated to continuum normalization. We find an interval of low flux in the light curve in which the pulsations cease almost completely, without any indication of an increasing absorption column. We investigate this dip in detail and argue that it is most likely that during the dip the accretion ceased and the afterglow of the fluorescent iron accounted for the main portion of the X-ray flux. A similar dip was found earlier in RXTE data, and we compare our findings to these results.

  4. Modelling High Resolution Absorption Spectra with ExoMolLine Lists: NH3and CH4

    DEFF Research Database (Denmark)

    Barton, E. J.; Yurchenko, S. N.; Tennyson, J.

    The conditions, chemical reactions and gas mixing in industrial progresses involving gasification or combustion can be monitored by in situ measurement of gas temperature and gas composition. This can be done spectroscopically, though the result is highly dependent on the quality of reference data...... [1]. For this reason, a smart collaboration has been established between Optical Diagnostics Group at DTU and ExoMol, to combine high resolution spectra measured at elevated temperatures and empirically tuned ab initio methods to produce suitable molecular line lists for modelling molecules...

  5. In-Line Capacitance Sensor for Real-Time Water Absorption Measurements

    Science.gov (United States)

    Nurge, Mark A.; Perusich, Stephen A.

    2010-01-01

    A capacitance/dielectric sensor was designed, constructed, and used to measure in real time the in-situ water concentration in a desiccant water bed. Measurements were carried out with two experimental setups: (1) passing nitrogen through a humidity generator and allowing the gas stream to become saturated at a measured temperature and pressure, and (2) injecting water via a syringe pump into a nitrogen stream. Both water vapor generating devices were attached to a downstream vertically-mounted water capture bed filled with 19.5 g of Moisture Gone desiccant. The sensor consisted of two electrodes: (1) a 1/8" dia stainless steel rod placed in the middle of the bed and (2) the outer shell of the stainless steel bed concentric with the rod. All phases of the water capture process (background, heating, absorption, desorption, and cooling) were monitored with capacitance. The measured capacitance was found to vary linearly with the water content in the bed at frequencies above 100 kHz indicating dipolar motion dominated the signal; below this frequency, ionic motion caused nonlinearities in the water concentration/capacitance relationship. The desiccant exhibited a dielectric relaxation whose activation energy was lowered upon addition of water indicating either a less hindered rotational motion or crystal reorientation.

  6. What's in the Wind? Determining the Properties of Outflowing Gas in Powerful Broad Absorption Line Quasars

    Science.gov (United States)

    Leighly, Karen

    2017-08-01

    A significant fraction of quasars exhibits blueshifted broadabsorption lines (BALs) in their rest-UV spectra, indicating powerfuloutflows emerging from the central engine. These outflows may removeangular momentum to enable black hole growth, enrich the intergalacticmedium with metals, and trigger quenching of star formation ingalaxies. Despite years of study, the physical conditions of theoutflowing gas are poorly understood. The handful of objects that havebeen subjected to detailed analysis are atypical and characterized byrelatively narrow lines where blending is unimportant. However,investigating more powerful BAL quasars will give us better insightinto the types of outflows much more likely to impact galaxyevolution.SimBAL is a novel spectral synthesis fitting method for BAL quasarsthat uses Bayesian model calibration to compare synthetic to observedspectra. With the model inputs of ionization parameter, columndensity, and covering fraction specified, the gas properties givingrise to the BAL features can be determined. We propose to applySimBAL to archival spectra of a sample of 14 luminous BAL quasars to characterize their bulk outflow properties as a function of velocityfor the first time. Our results will show the range of parameterstypical of powerful outflows, an essential step towards constrainingthe physics behind quasar winds and thus their impact on theirenvironments.

  7. First Time Rapid and Accurate Detection of Massive Number of Metal Absorption Lines in the Early Universe Using Deep Neural Network

    Science.gov (United States)

    Zhao, Yinan; Ge, Jian; Yuan, Xiaoyong; Li, Xiaolin; Zhao, Tiffany; Wang, Cindy

    2018-01-01

    Metal absorption line systems in the distant quasar spectra have been used as one of the most powerful tools to probe gas content in the early Universe. The MgII λλ 2796, 2803 doublet is one of the most popular metal absorption lines and has been used to trace gas and global star formation at redshifts between ~0.5 to 2.5. In the past, machine learning algorithms have been used to detect absorption lines systems in the large sky survey, such as Principle Component Analysis, Gaussian Process and decision tree, but the overall detection process is not only complicated, but also time consuming. It usually takes a few months to go through the entire quasar spectral dataset from each of the Sloan Digital Sky Survey (SDSS) data release. In this work, we applied the deep neural network, or “ deep learning” algorithms, in the most recently SDSS DR14 quasar spectra and were able to randomly search 20000 quasar spectra and detect 2887 strong Mg II absorption features in just 9 seconds. Our detection algorithms were verified with previously released DR12 and DR7 data and published Mg II catalog and the detection accuracy is 90%. This is the first time that deep neural network has demonstrated its promising power in both speed and accuracy in replacing tedious, repetitive human work in searching for narrow absorption patterns in a big dataset. We will present our detection algorithms and also statistical results of the newly detected Mg II absorption lines.

  8. DNA methylation profiles of organic anion transporting polypeptide 1B3 in cancer cell lines.

    Science.gov (United States)

    Ichihara, Sayaka; Kikuchi, Ryota; Kusuhara, Hiroyuki; Imai, Satoki; Maeda, Kazuya; Sugiyama, Yuichi

    2010-03-01

    Multispecific organic anion transporter, OATP1B3/SLCO1B3, is expressed in several cancer cell lines as well as tumor tissues, and its expression sensitizes the cells to some anti-cancer agents. The present study was aimed to characterize the DNA methylation profiles around the transcriptional start site (TSS) of OATP1B3 and correlate them with the mRNA expression in cancer and immortalized cell lines. The mRNA expression and DNA methylation profiles of OATP1B3 were determined by RT-PCR and bisulfite sequencing, respectively. The expression of OATP1B3 mRNA was detected in DLD-1, TFK-1, PK-8, and PK-45P cells, but below the limit of detection in HepG2, Caco-2, and HEK293 cells. Bisulfite sequencing demonstrated that CpG dinucleotides around the TSS are differentially methylated among cell lines and partly associated with the mRNA expression profile of OATP1B3. Furthermore, treatment with 5-aza-2'-deoxycytidine, an inhibitor of DNA methyltransferase, significantly increased the mRNA expression of OATP1B3 in HepG2 and Caco-2 cells by 18- and 14-fold, respectively, but not in DLD-1 and TFK-1 cells. DNA methylation-dependent gene silencing is at least partly involved in the regulation of OATP1B3 expression in cancer/immortalized cell lines.

  9. Thermal Boundary Layer Effects on Line-of-Sight Tunable Diode Laser Absorption Spectroscopy (TDLAS) Gas Concentration Measurements.

    Science.gov (United States)

    Qu, Zhechao; Werhahn, Olav; Ebert, Volker

    2018-01-01

    The effects of thermal boundary layers on tunable diode laser absorption spectroscopy (TDLAS) measurement results must be quantified when using the line-of-sight (LOS) TDLAS under conditions with spatial temperature gradient. In this paper, a new methodology based on spectral simulation is presented quantifying the LOS TDLAS measurement deviation under conditions with thermal boundary layers. The effects of different temperature gradients and thermal boundary layer thickness on spectral collisional widths and gas concentration measurements are quantified. A CO 2 TDLAS spectrometer, which has two gas cells to generate the spatial temperature gradients, was employed to validate the simulation results. The measured deviations and LOS averaged collisional widths are in very good agreement with the simulated results for conditions with different temperature gradients. We demonstrate quantification of thermal boundary layers' thickness with proposed method by exploitation of the LOS averaged the collisional width of the path-integrated spectrum.

  10. Ultraviolet and Optical Line Profile Variations in the Spectrum of ɛ Persei

    Science.gov (United States)

    Gies, D. R.; Kambe, E.; Josephs, T. S.; Bagnuolo, W. G., Jr.; Choi, Y. J.; Gudehus, D.; Guyton, K. M.; Hartkopf, W. I.; Hildebrand, J. L.; Kaye, A. B.; Mason, B. D.; Riddle, R. L.; Sowers, J. W.; Turner, N. H.; Wilson, J. W.; Xiong, Y.

    1999-11-01

    The rapid variable star, ɛ Per (B0.5 IV-III), displays the largest amplitude profile fluctuations known among the growing number of massive, spectrum-variable stars. Here we present an analysis of a continuous 5 day run of IUE UV spectroscopy, and we show for the first time that the systematic, blue-to-red moving patterns observed in high-quality optical spectra are also present in the UV photospheric lines. We present cross-correlation functions of the individual spectra with that of a narrow-lined standard that produce a high signal-to-noise ratio representation of the blue-to-red moving bump patterns found in individual lines. We then use time series analysis methods to determine the periodic components of the profile variations (after reregistering the spectra to correct for binary motion). There are at least six periods present (ranging from 8.46 to 2.27 hr), and most of these signals are also found in optical line variations observed in 1986 (although the relative amplitudes have changed significantly). Furthermore, analysis of a shorter time series of IUE spectra from 1984 shows that similar periods were present then. We also present Hα and He I λ6678 profiles obtained with the Georgia State University Multi-Telescope Telescope, which were made simultaneously with IUE, and we show that the profile variations are essentially identical in the UV and optical ranges. We rule out rotational modulation and circumstellar gas obscuration as possible causes, and we suggest instead that the variations are the result of photospheric nonradial pulsations of relatively low degree (l=3-5). There were significant changes (~10%) in the equivalent widths of the UV stellar wind lines during the IUE run, and we suggest that wind strengthening events are related to episodes of large-amplitude, constructive interference between the NRP modes. Thus, intermode beating may play an important role in promoting wind loss from massive stars.

  11. The pharmacokinetic profile of tamsulosin oral controlled absorption system (OCAS((R)))

    NARCIS (Netherlands)

    Michel, M. C.; Korstanje, C.; Krauwinkel, W.; Kuipers, M.

    2005-01-01

    Context: A new formulation of tamsulosin for the treatment of lower urinary tract symptoms suggestive of benign prostatic hyperplasia (LUTS/BPH) has been developed. This formulation uses the proprietary oral controlled absorption system (OCAS(R)) technology which has the potential to better control

  12. Calculated Resonance Line Profiles of [Mg II], [C II], and [Si IV] in the Solar Atmosphere

    Science.gov (United States)

    Avrett, E.; Landi, E.; McKillop, S.

    2013-12-01

    NASA's Interface Region Imaging Spectrograph space mission, launched 2013 June 27, is intended to study the structure of the solar chromosphere and the transition region between the chromosphere and corona. The spectral lines to be observed include the Mg II k line at 2796.5 Å, the C II 1334.5 Å line, and the Si IV line at 1393.8 Å, which are formed in the middle chromosphere, the upper chromosphere, and the lower transition region, respectively. Here we calculate the profiles of these lines from four models of the solar atmosphere, intended to represent the faint and mean internetwork, a network lane, and bright network. We show how the profiles change from the center of the solar disk toward the limb of the Sun and in response to outflows and inflows. These results are intended to cover the range of expected quiet-Sun observations and assist in their interpretation. We expect that the observations will lead to improvements in the models, which can then be used to estimate the required non-radiative heating in the different regions.

  13. Calculated resonance line profiles of [Mg II], [C II], and [Si IV] in the solar atmosphere

    International Nuclear Information System (INIS)

    Avrett, E.; McKillop, S.; Landi, E.

    2013-01-01

    NASA's Interface Region Imaging Spectrograph space mission, launched 2013 June 27, is intended to study the structure of the solar chromosphere and the transition region between the chromosphere and corona. The spectral lines to be observed include the Mg II k line at 2796.5 Å, the C II 1334.5 Å line, and the Si IV line at 1393.8 Å, which are formed in the middle chromosphere, the upper chromosphere, and the lower transition region, respectively. Here we calculate the profiles of these lines from four models of the solar atmosphere, intended to represent the faint and mean internetwork, a network lane, and bright network. We show how the profiles change from the center of the solar disk toward the limb of the Sun and in response to outflows and inflows. These results are intended to cover the range of expected quiet-Sun observations and assist in their interpretation. We expect that the observations will lead to improvements in the models, which can then be used to estimate the required non-radiative heating in the different regions.

  14. Uncertainty of Integrated Intensity Following Line Profile Fitting of Multiline Spectra.

    Science.gov (United States)

    Surmick, David M; Boukari, Hacene; Woodward, Jonathan; Stowe, Ashley C; Melikechi, Noureddine

    2018-01-01

    A novel method of determining the total uncertainty in the integrated intensity of fitted emission lines in multipeaked emission spectra is presented. The proposed method does not require an assumption of the type of line profile to be specified. The absolute difference between a fit and measured spectrum defines the uncertainty of the integrated signal intensity and is subsequently decomposed to determine the uncertainty of each peak in multiline fits. Decomposition relies on tabulating a weighting factor, which describes how each peak contributes to the total integral uncertainty. Applications of this method to quantitative approaches in laser-induced breakdown spectroscopy analysis are described.

  15. AN STIS ATLAS OF Ca II TRIPLET ABSORPTION LINE KINEMATICS IN GALACTIC NUCLEI

    International Nuclear Information System (INIS)

    Batcheldor, D.; Mandalou, J.; Axon, D.; Valluri, M.; Merritt, D.

    2013-01-01

    The relations observed between supermassive black holes and their host galaxies suggest a fundamental link in the processes that cause these two objects to evolve. A more comprehensive understanding of these relations could be gained by increasing the number of supermassive black hole mass (M . ) measurements. This can be achieved, in part, by continuing to model the stellar dynamics at the centers of galactic bulges using data of the highest possible spatial resolution. Consequently, we present here an atlas of galaxies in the Space Telescope Imaging Spectrograph (STIS) data archive that may have spectra suitable for new M . estimates. Archived STIS G750M data for all non-barred galactic bulges are co-aligned and combined, where appropriate, and the radial signal-to-noise ratios calculated. The line-of-sight velocity distributions from the Ca II triplet are then determined using a maximum penalized likelihood method. We find 19 out of 42 galaxies may provide useful new M . estimates since they are found to have data that is comparable in quality with data that has been used in the past to estimate M . . However, we find no relation between the signal-to-noise ratio in the previously analyzed spectra and the uncertainties of the black hole masses derived from the spectra. We also find that there is a very limited number of appropriately observed stellar templates in the archive from which to estimate the effects of template mismatching

  16. Primary orbit and the absorption lines of HDE 226868 (Cygnus X-1)

    International Nuclear Information System (INIS)

    Ninkov, Z.; Walker, G.A.H.; Yang, S.

    1987-01-01

    From Reticon spectra of about 1 A resolution taken between 1980 and 1984, the radial velocity curve of HDE 226868 is found to be characteristic of a single-line spectroscopic binary with K = 75.0 + or - 1.0 km/s and e = 0.0. Combining historical velocities from the literature with present data and applying a period-folding analysis, a period of 5.59964 + or - 0.00001 days is found. These values agree well with those published by Gies and Bolton (1982). The value of v sin i is estimated to be 94.3 + or - 5 km/s from CFHT Reticon spectra taken at 0.1 A resolution. Assuming that the rotation of the primary is synchronized to the orbital revolution of the secondary gives a primary to secondary mass ratio between 1.5 and 2.3. An absolute magnitude of -6.5 + or - 0.2 is derived from the equivalent width of H-gamma (1.5 + or - 0.1 A) and the calibration of Walker and Millward (1985), which is consistent with the spectral classification of O9.7 Iab. Assuming 20 solar masses as a reasonable estimate for the mass of the primary implies a mass of 10 + or - 1 solar masses for the secondary. 62 references

  17. Brush border membrane vesicle and Caco-2 cell line: Two experimental models for evaluation of absorption enhancing effects of saponins, bile salts, and some synthetic surfactants.

    Science.gov (United States)

    Moghimipour, Eskandar; Tabassi, Sayyed Abolghassem Sajadi; Ramezani, Mohammad; Handali, Somayeh; Löbenberg, Raimar

    2016-01-01

    The aim of this study was to investigate the influence of absorption enhancers in the uptake of hydrophilic compounds. The permeation of the two hydrophilic drug models gentamicin and 5 (6)-carboxyfluorescein (CF) across the brush border membrane vesicles and Caco-2 cell lines were evaluated using total saponins of Acanthophyllum squarrosum, Quillaja saponaria, sodium lauryl sulfate, sodium glycocholate, sodium taurodeoxycholate, and Tween 20 as absorption enhancers. Transepithelial electrical resistance (TEER) measurement was utilized to assess the paracellular permeability of cell lines. Confocal laser scanning microscopy (CLSM) was performed to obtain images of the distribution of CF in Caco-2 cells. These compounds were able to loosen tight junctions, thus increasing paracellular permeability. CLSM confirmed the effect of these absorption enhancers on CF transport across Caco-2 lines and increased the Caco-2 permeability via transcellular route. It was also confirmed that the decrease in TEER was transient and reversible after removal of permeation enhancers.

  18. Brush border membrane vesicle and Caco-2 cell line: Two experimental models for evaluation of absorption enhancing effects of saponins, bile salts, and some synthetic surfactants

    Directory of Open Access Journals (Sweden)

    Eskandar Moghimipour

    2016-01-01

    Full Text Available The aim of this study was to investigate the influence of absorption enhancers in the uptake of hydrophilic compounds. The permeation of the two hydrophilic drug models gentamicin and 5 (6-carboxyfluorescein (CF across the brush border membrane vesicles and Caco-2 cell lines were evaluated using total saponins of Acanthophyllum squarrosum, Quillaja saponaria, sodium lauryl sulfate, sodium glycocholate, sodium taurodeoxycholate , and Tween 20 as absorption enhancers. Transepithelial electrical resistance (TEER measurement was utilized to assess the paracellular permeability of cell lines. Confocal laser scanning microscopy (CLSM was performed to obtain images of the distribution of CF in Caco-2 cells. These compounds were able to loosen tight junctions, thus increasing paracellular permeability. CLSM confirmed the effect of these absorption enhancers on CF transport across Caco-2 lines and increased the Caco-2 permeability via transcellular route. It was also confirmed that the decrease in TEER was transient and reversible after removal of permeation enhancers.

  19. Brush border membrane vesicle and Caco-2 cell line: Two experimental models for evaluation of absorption enhancing effects of saponins, bile salts, and some synthetic surfactants

    Science.gov (United States)

    Moghimipour, Eskandar; Tabassi, Sayyed Abolghassem Sajadi; Ramezani, Mohammad; Handali, Somayeh; Löbenberg, Raimar

    2016-01-01

    The aim of this study was to investigate the influence of absorption enhancers in the uptake of hydrophilic compounds. The permeation of the two hydrophilic drug models gentamicin and 5 (6)-carboxyfluorescein (CF) across the brush border membrane vesicles and Caco-2 cell lines were evaluated using total saponins of Acanthophyllum squarrosum, Quillaja saponaria, sodium lauryl sulfate, sodium glycocholate, sodium taurodeoxycholate, and Tween 20 as absorption enhancers. Transepithelial electrical resistance (TEER) measurement was utilized to assess the paracellular permeability of cell lines. Confocal laser scanning microscopy (CLSM) was performed to obtain images of the distribution of CF in Caco-2 cells. These compounds were able to loosen tight junctions, thus increasing paracellular permeability. CLSM confirmed the effect of these absorption enhancers on CF transport across Caco-2 lines and increased the Caco-2 permeability via transcellular route. It was also confirmed that the decrease in TEER was transient and reversible after removal of permeation enhancers. PMID:27429925

  20. Cytostatic resistance profile of the sulfur mustard resistant keratinocyte cell line HaCaT/SM.

    Science.gov (United States)

    Schmidt, Annette; Wolf, Markus; Rothmiller, Simone; Worek, Franz; Steinritz, Dirk; Thiermann, Horst

    2018-03-15

    The cell line HaCaT/SM was developed as a sulfur mustard (SM) resistant cell line from the human keratinocyte cell line HaCaT. This cell line was established to learn more about the effect of SM and possible therapeutic approaches to counteract the cytotoxic effects of SM. The aim of this study was to clarify whether the SM-resistant cell line HaCaT/SM exhibit also resistance to other alkylating agents or cytotoxic drugs with different mechanism of action. The chemosensitivity of SM-resistant human keratinocyte cell line HaCaT/SM and the original cell line HaCaT were tested using the XTT assay. Nine cytotoxic drugs from five different substance groups were investigated. HaCaT/SM showed a significant increase in resistance against all tested drugs. From the substance class of the alkylating agents, HaCaT/SM showed the strongest resistance increase against chlorambucil (1.7 fold increase). Whereas over all substances strongest increase was observed against cisplatin (5.1 fold increase). The highest resistance was observed for cisplatin. The SM resistant cells revealed changes in the miRNA profile as described before. The resistance to cisplatin is also connected to a specific miRNA profile. Interestingly, changes of miRNA-203 and miRNA-21 levels were found in HaCaT/SM as well as in cisplatin resistant cells. It is therefore conceivable that the same resistance pathways are involved for both substances. Copyright © 2018 Elsevier B.V. All rights reserved.

  1. Modification of UV absorption profile of polymer film reflectors to increase solar-weighted reflectance

    Science.gov (United States)

    Jorgensen, Gary; Gee, Randall C.; White, David

    2017-05-02

    Provided are reflective thin film constructions including a reduced number of layers, which provides for increased solar-weighted hemispherical reflectance and durability. Reflective films include those comprising an ultraviolet absorbing abrasion resistant coating over a metal layer. Also provided are ultraviolet absorbing abrasion resistant coatings and methods for optimizing the ultraviolet absorption of an abrasion resistant coating. Reflective films disclosed herein are useful for solar reflecting, solar collecting, and solar concentrating applications, such as for the generation of electrical power.

  2. Gene expression profiles of human promyelocytic leukemia cell lines exposed to volatile organic compounds.

    Science.gov (United States)

    Sarma, Sailendra Nath; Kim, Youn-Jung; Ryu, Jae-Chun

    2010-05-27

    Benzene, toluene, o-xylene, ethylbenzene, trichloroethylene and dichloromethane are the most widely used volatile organic compounds (VOCs), and their toxic mechanisms are still undefined. This study analyzed the genome-wide expression profiles of human promyelocytic leukemia HL-60 cells exposed to VOCs using a 35-K whole human genome oligonucleotide microarray to ascertain potential biomarkers. Genes with a significantly increased expression levels (over 1.5-fold and p-values lines to VOC exposure.

  3. Detection method of proximal caries using line profile in digital intra-oral radiography

    International Nuclear Information System (INIS)

    Choi, Yong Suk; Kim, Gyu Tae; Hwang, Eui Hwan; Lee, Min Ja; Choi, Sam Jin; Park, Hun Kuk; Park, Jeong Hoon

    2009-01-01

    The purpose of this study was to investigate how to detect proximal caries using line profile and validate linear measurements of proximal caries lesions by basic digital manipulation of radiographic images. The X-ray images of control group (15) and caries teeth (15) from patients were used. For each image, the line profile at the proximal caries-susceptible zone was calculated. To evaluate the contrast as a function of line profile to detect proximal caries, a difference coefficient (D) that indicates the relative difference between caries and sound dentin or intact enamel was measured. Mean values of D were 0.0354 ± 0.0155 in non-caries and 0.2632 ± 0.0982 in caries (p<0.001). The mean values of caries group were higher than non-caries group and there was correlation between proximal dental caries and D. It is demonstrated that the mean value of D from caries group was higher than that of control group. From the result, values of D possess great potentiality as a new detection parameter for proximal dental caries.

  4. Detection method of proximal caries using line profile in digital intra-oral radiography

    Energy Technology Data Exchange (ETDEWEB)

    Choi, Yong Suk; Kim, Gyu Tae; Hwang, Eui Hwan; Lee, Min Ja; Choi, Sam Jin; Park, Hun Kuk [Department of Oral and Maxillofacial Radiology, School of Dentistry and Institute of Oral Biology, Kyung Hee University, Seoul (Korea, Republic of); Park, Jeong Hoon [Department of Biomedical Engineering, College of Medicine, Kyung Hee University, Seoul (Korea, Republic of)

    2009-12-15

    The purpose of this study was to investigate how to detect proximal caries using line profile and validate linear measurements of proximal caries lesions by basic digital manipulation of radiographic images. The X-ray images of control group (15) and caries teeth (15) from patients were used. For each image, the line profile at the proximal caries-susceptible zone was calculated. To evaluate the contrast as a function of line profile to detect proximal caries, a difference coefficient (D) that indicates the relative difference between caries and sound dentin or intact enamel was measured. Mean values of D were 0.0354 {+-} 0.0155 in non-caries and 0.2632 {+-} 0.0982 in caries (p<0.001). The mean values of caries group were higher than non-caries group and there was correlation between proximal dental caries and D. It is demonstrated that the mean value of D from caries group was higher than that of control group. From the result, values of D possess great potentiality as a new detection parameter for proximal dental caries.

  5. Intercomparison of ozone profiles measurements by a differential absorption lidar system and satellite instruments at Buenos Aires, Argentina

    Science.gov (United States)

    Pazmiño, Andrea; Godin, Sophie; Wolfram, Elian; Lavorato, Mario; Porteneuve, Jacques; Quel, Eduardo; Mégie, Gérard

    2003-07-01

    A ground-based DIfferential Absorption Lidar (DIAL) system has been implemented at CEILAP (CITEFA-CONICET) laboratory (34°33'S, 58°30'W), located in the Buenos Aires industrial suburbs. The goal is to perform measurements of the stratospheric ozone layer. Systematic measurements of ozone concentration profiles from ˜18 to ˜35 km altitude are performed since early 1999. Our measurements are carried out in 5 h in average during the night and in cloudless conditions. The DIAL system allows us to calculate directly the ozone profile from the lidar backscattering radiation since it is a self-calibrating technique. The signal processing takes into account the influence of the temperature profile on the ozone cross section. The temperature data are obtained from the radiosondes measurements performed at Ezeiza International Airport (34°30'S, 58°18'W), 27 km from DIAL station. The evolution of the stratospheric ozone profile is studied for different months. Results are compared with the data obtained by different satellites SAGE II, HALOE and GOME. The comparisons between our DIAL system and the satellite measurements show an agreement better than 20% for 20-35 km altitude range.

  6. Plasticity and X-ray Line Profile Analysis of the semicrystalline polymer poly(3-hydroxybutyrate)

    Energy Technology Data Exchange (ETDEWEB)

    Spieckermann, F; Wilhelm, H; Schafler, E; Kerber, M; Zehetbauer, M J [Research Group Physics of Nanostructured Materials, Faculty of Physics, University of Vienna, Boltzmanngasse 5, Wien (Austria); Bernstorff, S [Sincrotrone ELETTRA Trieste, Strada Statale 14 - km 163.5 in AREA Science Park, 34012 Basovizza, Trieste (Italy)

    2010-07-01

    The evolution of the microstructure during compressive deformation of the biodegradable polymer poly(3-hydroxybutyrate) (P3HB) was investigated in-situ via X-ray diffraction using synchrotron radiation. Flow curves were measured in-situ together with X-ray profiles for several degrees of deformation. The profiles were analysed using Multi-Reflection X-ray Line Profile Analysis (MXPA) adapted by the authors for semicrystalline polymers providing lamella thickness, crystallinity, and the presence and density of dislocations as a function of the deformation. In contrast to previous investigations in {alpha} crystallised isotactic polypropylene ({alpha}-iPP), P3HB does not exhibit a deformation induced increase of the dislocation density which suggests mechanisms other than dislocations to be involved in plastic deformation of P3HB.

  7. Linking Signatures of Accretion with Magnetic Field Measurements–Line Profiles are not Significantly Different in Magnetic and Non-magnetic Herbig Ae/Be Stars

    Science.gov (United States)

    Reiter, Megan; Calvet, Nuria; Thanathibodee, Thanawuth; Kraus, Stefan; Cauley, P. Wilson; Monnier, John; Rubinstein, Adam; Aarnio, Alicia; Harries, Tim J.

    2018-01-01

    Herbig Ae/Be stars are young, pre-main-sequence stars that sample the transition in structure and evolution between low- and high-mass stars, providing a key test of accretion processes in higher-mass stars. Few Herbig Ae/Be stars have detected magnetic fields, calling into question whether the magnetospheric accretion paradigm developed for low-mass stars can be scaled to higher masses. We present He I 10830 Å line profiles for 64 Herbig Ae/Be stars with a magnetic field measurement in order to test magnetospheric accretion in the physical regime where its efficacy remains uncertain. Of the five stars with a magnetic field detection, one shows redshifted absorption, indicative of infall, and two show blueshifted absorption, tracing mass outflow. The fraction of redshifted and blueshifted absorption profiles in the non-magnetic Herbig Ae/Be stars is remarkably similar, suggesting that the stellar magnetic field does not affect gas kinematics traced by He I 10830 Å. Line profile morphology does not correlate with the luminosity, rotation rate, mass accretion rate, or disk inclination. Only the detection of a magnetic field and a nearly face-on disk inclination show a correlation (albeit for a few sources). This provides further evidence for weaker dipoles and more complex field topologies as stars develop a radiative envelope. The small number of magnetic Herbig Ae/Be stars has already called into question whether magnetospheric accretion can be scaled to higher masses; accretion signatures are not substantially different in magnetic Herbig Ae/Be stars, casting further doubt that they accrete in the same manner as classical T Tauri stars.

  8. Large-Scale Profiling of Kinase Dependencies in Cancer Cell Lines.

    Science.gov (United States)

    Campbell, James; Ryan, Colm J; Brough, Rachel; Bajrami, Ilirjana; Pemberton, Helen N; Chong, Irene Y; Costa-Cabral, Sara; Frankum, Jessica; Gulati, Aditi; Holme, Harriet; Miller, Rowan; Postel-Vinay, Sophie; Rafiq, Rumana; Wei, Wenbin; Williamson, Chris T; Quigley, David A; Tym, Joe; Al-Lazikani, Bissan; Fenton, Timothy; Natrajan, Rachael; Strauss, Sandra J; Ashworth, Alan; Lord, Christopher J

    2016-03-15

    One approach to identifying cancer-specific vulnerabilities and therapeutic targets is to profile genetic dependencies in cancer cell lines. Here, we describe data from a series of siRNA screens that identify the kinase genetic dependencies in 117 cancer cell lines from ten cancer types. By integrating the siRNA screen data with molecular profiling data, including exome sequencing data, we show how vulnerabilities/genetic dependencies that are associated with mutations in specific cancer driver genes can be identified. By integrating additional data sets into this analysis, including protein-protein interaction data, we also demonstrate that the genetic dependencies associated with many cancer driver genes form dense connections on functional interaction networks. We demonstrate the utility of this resource by using it to predict the drug sensitivity of genetically or histologically defined subsets of tumor cell lines, including an increased sensitivity of osteosarcoma cell lines to FGFR inhibitors and SMAD4 mutant tumor cells to mitotic inhibitors. Copyright © 2016 The Authors. Published by Elsevier Inc. All rights reserved.

  9. Large-Scale Profiling of Kinase Dependencies in Cancer Cell Lines

    Directory of Open Access Journals (Sweden)

    James Campbell

    2016-03-01

    Full Text Available One approach to identifying cancer-specific vulnerabilities and therapeutic targets is to profile genetic dependencies in cancer cell lines. Here, we describe data from a series of siRNA screens that identify the kinase genetic dependencies in 117 cancer cell lines from ten cancer types. By integrating the siRNA screen data with molecular profiling data, including exome sequencing data, we show how vulnerabilities/genetic dependencies that are associated with mutations in specific cancer driver genes can be identified. By integrating additional data sets into this analysis, including protein-protein interaction data, we also demonstrate that the genetic dependencies associated with many cancer driver genes form dense connections on functional interaction networks. We demonstrate the utility of this resource by using it to predict the drug sensitivity of genetically or histologically defined subsets of tumor cell lines, including an increased sensitivity of osteosarcoma cell lines to FGFR inhibitors and SMAD4 mutant tumor cells to mitotic inhibitors.

  10. Tunable diode laser absorption spectroscopy-based tomography system for on-line monitoring of two-dimensional distributions of temperature and H2O mole fraction

    Science.gov (United States)

    Xu, Lijun; Liu, Chang; Jing, Wenyang; Cao, Zhang; Xue, Xin; Lin, Yuzhen

    2016-01-01

    To monitor two-dimensional (2D) distributions of temperature and H2O mole fraction, an on-line tomography system based on tunable diode laser absorption spectroscopy (TDLAS) was developed. To the best of the authors' knowledge, this is the first report on a multi-view TDLAS-based system for simultaneous tomographic visualization of temperature and H2O mole fraction in real time. The system consists of two distributed feedback (DFB) laser diodes, a tomographic sensor, electronic circuits, and a computer. The central frequencies of the two DFB laser diodes are at 7444.36 cm-1 (1343.3 nm) and 7185.6 cm-1 (1391.67 nm), respectively. The tomographic sensor is used to generate fan-beam illumination from five views and to produce 60 ray measurements. The electronic circuits not only provide stable temperature and precise current controlling signals for the laser diodes but also can accurately sample the transmitted laser intensities and extract integrated absorbances in real time. Finally, the integrated absorbances are transferred to the computer, in which the 2D distributions of temperature and H2O mole fraction are reconstructed by using a modified Landweber algorithm. In the experiments, the TDLAS-based tomography system was validated by using asymmetric premixed flames with fixed and time-varying equivalent ratios, respectively. The results demonstrate that the system is able to reconstruct the profiles of the 2D distributions of temperature and H2O mole fraction of the flame and effectively capture the dynamics of the combustion process, which exhibits good potential for flame monitoring and on-line combustion diagnosis.

  11. Differential absorption and Raman lidar for water vapor profile measurements - A review

    Science.gov (United States)

    Grant, William B.

    1991-01-01

    Differential absorption lidar and Raman lidar have been applied to the range-resolved measurements of water vapor density for more than 20 years. Results have been obtained using both lidar techniques that have led to improved understanding of water vapor distributions in the atmosphere. This paper reviews the theory of the measurements, including the sources of systematic and random error; the progress in lidar technology and techniques during that period, including a brief look at some of the lidar systems in development or proposed; and the steps being taken to improve such lidar systems.

  12. Two-dimensional temperature and carbon dioxide concentration profiles in atmospheric laminar diffusion flames measured by mid-infrared direct absorption spectroscopy at 4.2 μm

    Science.gov (United States)

    Liu, Xunchen; Zhang, Guoyong; Huang, Yan; Wang, Yizun; Qi, Fei

    2018-04-01

    We present a multi-line flame thermometry technique based on mid-infrared direct absorption spectroscopy of carbon dioxide at its v_3 fundamental around 4.2 μm that is particularly suitable for sooting flames. Temperature and concentration profiles of gas phase molecules in a flame are important characteristics to understand its flame structure and combustion chemistry. One of the standard laboratory flames to analyze polycyclic aromatic hydrocarbons (PAH) and soot formation is laminar non-premixed co-flow flame, but PAH and soot introduce artifact to most non-contact optical measurements. Here we report an accurate diagnostic method of the temperature and concentration profiles of CO2 in ethylene diffusion flames by measuring its v_3 vibrational fundamental. An interband cascade laser was used to probe the R-branch bandhead at 4.2 μm, which is highly sensitive to temperature change, free from soot interference and ambient background. Calibration measurement was carried out both in a low-pressure Herriott cell and an atmospheric pressure tube furnace up to 1550 K to obtain spectroscopic parameters for high-temperature spectra. In our co-flow flame measurement, two-dimensional line-of-sight optical depth of an ethylene/N2 laminar sooting flame was recorded by dual-beam absorption scheme. The axially symmetrical attenuation coefficient profile of CO2 in the co-flow flame was reconstructed from the optical depth by Abel inversion. Spatially resolved flame temperature and in situ CO2 volume fraction profiles were derived from the calibrated CO2 spectroscopic parameters and compared with temperature profiles measured by two-line atomic fluorescence.

  13. Average extinction curves and relative abundances for quasi-stellar object absorption-line systems at 1 <=zabs < 2

    Science.gov (United States)

    York, Donald G.; Khare, Pushpa; Vanden Berk, Daniel; Kulkarni, Varsha P.; Crotts, Arlin P. S.; Lauroesch, James T.; Richards, Gordon T.; Schneider, Donald P.; Welty, Daniel E.; Alsayyad, Yusra; Kumar, Abhishek; Lundgren, Britt; Shanidze, Natela; Smith, Tristan; Vanlandingham, Johnny; Baugher, Britt; Hall, Patrick B.; Jenkins, Edward B.; Menard, Brice; Rao, Sandhya; Tumlinson, Jason; Turnshek, David; Yip, Ching-Wa; Brinkmann, Jon

    2006-04-01

    We have studied a sample of 809 MgII absorption systems with 1.0 <=zabs<= 1.86 in the spectra of Sloan Digital Sky Survey quasi-stellar objects (QSOs), with the aim of understanding the nature and abundance of the dust and the chemical abundances in the intervening absorbers. Normalized, composite spectra were derived, for abundance measurements, for the full sample and several subsamples, chosen on the basis of the line strengths and other absorber and QSO properties. Average extinction curves were obtained for the subsamples by comparing their geometric mean spectra with those of matching samples of QSOs without absorbers in their spectra. There is clear evidence for the presence of dust in the intervening absorbers. The 2175-Å feature is not present in the extinction curves, for any of the subsamples. The extinction curves are similar to the Small Magellanic Cloud (SMC) extinction curve with a rising ultraviolet (UV) extinction below 2200 Å. The absorber rest-frame colour excess, E(B-V), derived from the extinction curves, depends on the absorber properties and ranges from <0.001 to 0.085 for various subsamples. The column densities of MgII, AlII, SiII, CaII, TiII, CrII, MnII, FeII, CoII, NiII and ZnII do not show such a correspondingly large variation. The overall depletions in the high E(B-V) samples are consistent with those found for individual damped Lyman α systems, the depletion pattern being similar to halo clouds in the Galaxy. Assuming an SMC gas-to-dust ratio, we find a trend of increasing abundance with decreasing extinction; systems with NHI~ 1020cm-2 show solar abundance of Zn. The large velocity spread of strong MgII systems seems to be mimicked by weak lines of other elements. The ionization of the absorbers, in general appears to be low: the ratio of the column densities of AlIII to AlII is always less than 1/2. QSOs with absorbers are, in general, at least three times as likely to have highly reddened spectra as compared to QSOs without any

  14. Application of Physiologically Based Absorption Modeling to Characterize the Pharmacokinetic Profiles of Oral Extended Release Methylphenidate Products in Adults.

    Directory of Open Access Journals (Sweden)

    Xiaoxia Yang

    Full Text Available A previously presented physiologically-based pharmacokinetic model for immediate release (IR methylphenidate (MPH was extended to characterize the pharmacokinetic behaviors of oral extended release (ER MPH formulations in adults for the first time. Information on the anatomy and physiology of the gastrointestinal (GI tract, together with the biopharmaceutical properties of MPH, was integrated into the original model, with model parameters representing hepatic metabolism and intestinal non-specific loss recalibrated against in vitro and in vivo kinetic data sets with IR MPH. A Weibull function was implemented to describe the dissolution of different ER formulations. A variety of mathematical functions can be utilized to account for the engineered release/dissolution technologies to achieve better model performance. The physiological absorption model tracked well the plasma concentration profiles in adults receiving a multilayer-release MPH formulation or Metadate CD, while some degree of discrepancy was observed between predicted and observed plasma concentration profiles for Ritalin LA and Medikinet Retard. A local sensitivity analysis demonstrated that model parameters associated with the GI tract significantly influenced model predicted plasma MPH concentrations, albeit to varying degrees, suggesting the importance of better understanding the GI tract physiology, along with the intestinal non-specific loss of MPH. The model provides a quantitative tool to predict the biphasic plasma time course data for ER MPH, helping elucidate factors responsible for the diverse plasma MPH concentration profiles following oral dosing of different ER formulations.

  15. Comprehensive expression profiling of tumor cell lines identifies molecular signatures of melanoma progression.

    Directory of Open Access Journals (Sweden)

    Byungwoo Ryu

    2007-07-01

    Full Text Available Gene expression profiling has revolutionized our ability to molecularly classify primary human tumors and significantly enhanced the development of novel tumor markers and therapies; however, progress in the diagnosis and treatment of melanoma over the past 3 decades has been limited, and there is currently no approved therapy that significantly extends lifespan in patients with advanced disease. Profiling studies of melanoma to date have been inconsistent due to the heterogeneous nature of this malignancy and the limited availability of informative tissue specimens from early stages of disease.In order to gain an improved understanding of the molecular basis of melanoma progression, we have compared gene expression profiles from a series of melanoma cell lines representing discrete stages of malignant progression that recapitulate critical characteristics of the primary lesions from which they were derived. Here we describe the unsupervised hierarchical clustering of profiling data from melanoma cell lines and melanocytes. This clustering identifies two distinctive molecular subclasses of melanoma segregating aggressive metastatic tumor cell lines from less-aggressive primary tumor cell lines. Further analysis of expression signatures associated with melanoma progression using functional annotations categorized these transcripts into three classes of genes: 1 Upregulation of activators of cell cycle progression, DNA replication and repair (CDCA2, NCAPH, NCAPG, NCAPG2, PBK, NUSAP1, BIRC5, ESCO2, HELLS, MELK, GINS1, GINS4, RAD54L, TYMS, and DHFR, 2 Loss of genes associated with cellular adhesion and melanocyte differentiation (CDH3, CDH1, c-KIT, PAX3, CITED1/MSG-1, TYR, MELANA, MC1R, and OCA2, 3 Upregulation of genes associated with resistance to apoptosis (BIRC5/survivin. While these broad classes of transcripts have previously been implicated in the progression of melanoma and other malignancies, the specific genes identified within each class

  16. BEYOND THE STANDARD MODEL OF THE DISC–LINE SPECTRAL PROFILES FROM BLACK HOLE ACCRETION DISCS

    Directory of Open Access Journals (Sweden)

    Vjaceslav Sochora

    2014-08-01

    Full Text Available The strong gravitational field of a black hole has distinct effects on the observed profile of a spectral line from an accretion disc near a black hole. The observed profile of the spectral line is broadened and skewed by a fast orbital motion and redshifted by a gravitational field. These effects can help us to constrain the parameters of a system with a black hole, both in active galactic nuclei and in a stellar-mass black hole. Here we explore the fact that an accretion disc emission can be mathematically imagined as a superposition of radiating accretion rings that extend from the inner edge to the outer rim of the disc, with some radially varying emissivity. In our work, we show that a characteristic double-horn profile of several radially confined (relatively narrow accretion rings or belts could be recognized by the planned instruments onboard future satellites (such as the proposed ESA Large Observatory for X-ray Timing.

  17. Feasibility of tropospheric water vapor profiling using infrared heterodyne differential absorption lidar

    Energy Technology Data Exchange (ETDEWEB)

    Grund, C.J.; Hardesty, R.M. [National Oceanic and Atmospheric Administration Environmental Technology Laboratoy, Boulder, CO (United States); Rye, B.J. [Univ. of Colorado, Boulder, CO (United States)

    1996-04-01

    The development and verification of realistic climate model parameterizations for clouds and net radiation balance and the correction of other site sensor observations for interferences due to the presence of water vapor are critically dependent on water vapor profile measurements. In this study, we develop system performance models and examine the potential of infrared differential absoroption lidar (DIAL) to determine the concentration of water vapor.

  18. Histone modification profiling in breast cancer cell lines highlights commonalities and differences among subtypes.

    Science.gov (United States)

    Xi, Yuanxin; Shi, Jiejun; Li, Wenqian; Tanaka, Kaori; Allton, Kendra L; Richardson, Dana; Li, Jing; Franco, Hector L; Nagari, Anusha; Malladi, Venkat S; Coletta, Luis Della; Simper, Melissa S; Keyomarsi, Khandan; Shen, Jianjun; Bedford, Mark T; Shi, Xiaobing; Barton, Michelle C; Lee Kraus, W; Li, Wei; Dent, Sharon Y R

    2018-02-20

    Epigenetic regulators are frequently mutated or aberrantly expressed in a variety of cancers, leading to altered transcription states that result in changes in cell identity, behavior, and response to therapy. To define alterations in epigenetic landscapes in breast cancers, we profiled the distributions of 8 key histone modifications by ChIP-Seq, as well as primary (GRO-seq) and steady state (RNA-Seq) transcriptomes, across 13 distinct cell lines that represent 5 molecular subtypes of breast cancer and immortalized human mammary epithelial cells. Using combinatorial patterns of distinct histone modification signals, we defined subtype-specific chromatin signatures to nominate potential biomarkers. This approach identified AFAP1-AS1 as a triple negative breast cancer-specific gene associated with cell proliferation and epithelial-mesenchymal-transition. In addition, our chromatin mapping data in basal TNBC cell lines are consistent with gene expression patterns in TCGA that indicate decreased activity of the androgen receptor pathway but increased activity of the vitamin D biosynthesis pathway. Together, these datasets provide a comprehensive resource for histone modification profiles that define epigenetic landscapes and reveal key chromatin signatures in breast cancer cell line subtypes with potential to identify novel and actionable targets for treatment.

  19. The profile of attention differs between locations orthogonal to and in line with reach direction.

    Science.gov (United States)

    Stewart, Emma E M; Ma-Wyatt, Anna

    2017-11-01

    People make movements in a variety of directions when interacting with the world around them. It has been well documented that attention shifts to the goal of an upcoming movement, whether the movement is a saccade or a reach. However, recent evidence suggests that the direction of a movement may influence the spatial spread of attention (Stewart & Ma-Wyatt, 2015, Journal of Vision, 15(5), 10). We investigated whether the spatiotemporal profile of attention differs depending on where that location is situated relative to the direction of movement, and if this pattern is consistent across different movement effectors. We compared attentional facilitation at locations in line with or orthogonal to the movement, for reach-only, reach-plus-saccade, and saccade-only conditions. Results show that the spatiotemporal profile of attention differs across different movement combinations, and is also different at target locations orthogonal to and in line with the movement direction. Specifically, when a reach alone was made, there was a general decrease in attention at all locations during the movement and a general increase in attention at all locations with a saccade only. However, the concurrent reach and saccade condition showed a premovement attentional facilitation at locations orthogonal to movement direction, but not those in line with the movement direction. These results suggest attentional guidance may be more important at differing time points, depending on the type of movement.

  20. Distortion of absorption-line velocity curves due to x-ray heating in x-ray binaries

    International Nuclear Information System (INIS)

    Milgrom, M.

    1976-01-01

    The effects of X-ray heating on the measured absorption line velocities, in X-ray binaries with low X-rays to optical luminosities ratio are considered. These effects may be appreciable even for such binaries where the effect of X-ray heating on the light-curve is negligible. The effects are studied qualitatively and suggest possible ways to partially eliminate the systematic errors introduced by them. The individual systems Cyg x-1 and SMC x-1 are treated and the results of numerical calculations are presented for them. For Cyg x-1 it is found that the effect is detectable during the X-ray 'high' state in all regions of the spectrum. During the 'low' state it may be important in the red region of the spectrum. The results for the case in which soft X-ray fluxes (E < or approximately .4 keV, suggested by theoretical models) are present are also given. For SMC x-1 a strong effect for Hα, Hβ, Hγ had been found. This effect may be responsible for the observed variable velocity curve. We also find for SMC x-1 that the average X-ray intensity falling on the primary must be considerably smaller than what is derived from the detected flux, or else the effect is too large. (author)

  1. On-line preconcentration and determination of mercury in biological and environmental samples by cold vapor-atomic absorption spectrometry

    International Nuclear Information System (INIS)

    Ferrua, N.; Cerutti, S.; Salonia, J.A.; Olsina, R.A.; Martinez, L.D.

    2007-01-01

    An on-line procedure for the determination of traces of total mercury in environmental and biological samples is described. The present methodology combines cold vapor generation associated to atomic absorption spectrometry (CV-AAS) with preconcentration of the analyte on a minicolumn packed with activated carbon. The retained analyte was quantitatively eluted from the minicolumn with nitric acid. After that, volatile specie of mercury was generated by merging the acidified sample and sodium tetrahydroborate(III) in a continuous flow system. The gaseous analyte was subsequently introduced via a stream of Ar carrier into the atomizer device. Optimizations of both, preconcentration and mercury volatile specie generation variables were carried out using two level full factorial design (2 3 ) with 3 replicates of the central point. Considering a sample consumption of 25 mL, an enrichment factor of 13-fold was obtained. The detection limit (3σ) was 10 ng L -1 and the precision (relative standard deviation) was 3.1% (n = 10) at the 5 μg L -1 level. The calibration curve using the preconcentration system for mercury was linear with a correlation coefficient of 0.9995 at levels near the detection limit up to at least 1000 μg L -1 . Satisfactory results were obtained for the analysis of mercury in tap water and hair samples

  2. Crowdsourcing Broad Absorption Line Properties and Other Features of Quasar Outflow Using Zooniverse Citizen Science Project Platform

    Science.gov (United States)

    Crowe, Cassie; Lundgren, Britt; Grier, Catherine

    2018-01-01

    The Sloan Digital Sky Survey (SDSS) regularly publishes vast catalogs of quasars and other astronomical objects. Previously, the SDSS collaboration has used visual inspection to check quasar redshift validity and flag instances of broad absorption lines (BALs). This information helps researchers to easily single out the quasars with BAL properties and study their outflows and other intervening gas clouds. Due to the ever-growing number of new SDSS quasar observations, visual inspections are no longer possible using previous methods. Currently, BAL information is being determined entirely computationally, and the accuracy of that information is not precisely known. This project uses the Zooniverse citizen science platform to visually inspect quasar spectra for BAL properties, to check the accuracy of the current autonomous methods, and to flag multi-phase outflows and find candidates for in-falling gas into the quasar central engine. The layout and format of a Zooniverse project provides an easier way to inspect and record data on each spectrum and share the workload via crowdsourcing. Work done by the SDSS collaboration members is serving as a beta test for a public project upon the official release of the DR14 quasar catalog by SDSS.

  3. Predicting the profile of nutrients available for absorption: from nutrient requirement to animal response and environmental impact.

    Science.gov (United States)

    Dijkstra, J; Kebreab, E; Mills, J A N; Pellikaan, W F; López, S; Bannink, A; France, J

    2007-02-01

    Current feed evaluation systems for dairy cattle aim to match nutrient requirements with nutrient intake at pre-defined production levels. These systems were not developed to address, and are not suitable to predict, the responses to dietary changes in terms of production level and product composition, excretion of nutrients to the environment, and nutrition related disorders. The change from a requirement to a response system to meet the needs of various stakeholders requires prediction of the profile of absorbed nutrients and its subsequent utilisation for various purposes. This contribution examines the challenges to predicting the profile of nutrients available for absorption in dairy cattle and provides guidelines for further improved prediction with regard to animal production responses and environmental pollution.The profile of nutrients available for absorption comprises volatile fatty acids, long-chain fatty acids, amino acids and glucose. Thus the importance of processes in the reticulo-rumen is obvious. Much research into rumen fermentation is aimed at determination of substrate degradation rates. Quantitative knowledge on rates of passage of nutrients out of the rumen is rather limited compared with that on degradation rates, and thus should be an important theme in future research. Current systems largely ignore microbial metabolic variation, and extant mechanistic models of rumen fermentation give only limited attention to explicit representation of microbial metabolic activity. Recent molecular techniques indicate that knowledge on the presence and activity of various microbial species is far from complete. Such techniques may give a wealth of information, but to include such findings in systems predicting the nutrient profile requires close collaboration between molecular scientists and mathematical modellers on interpreting and evaluating quantitative data. Protozoal metabolism is of particular interest here given the paucity of quantitative data

  4. Correlations between RNA and protein expression profiles in 23 human cell lines

    Directory of Open Access Journals (Sweden)

    Pontén Fredrik

    2009-08-01

    Full Text Available Abstract Background The Central Dogma of biology holds, in famously simplified terms, that DNA makes RNA makes proteins, but there is considerable uncertainty regarding the general, genome-wide correlation between levels of RNA and corresponding proteins. Therefore, to assess degrees of this correlation we compared the RNA profiles (determined using both cDNA- and oligo-based microarrays and protein profiles (determined immunohistochemically in tissue microarrays of 1066 gene products in 23 human cell lines. Results A high mean correlation coefficient (0.52 was obtained from the pairwise comparison of RNA levels determined by the two platforms. Significant correlations, with correlation coefficients exceeding 0.445, between protein and RNA levels were also obtained for a third of the specific gene products. However, the correlation coefficients between levels of RNA and protein products of specific genes varied widely, and the mean correlations between the protein and corresponding RNA levels determined using the cDNA- and oligo-based microarrays were 0.25 and 0.20, respectively. Conclusion Significant correlations were found in one third of the examined RNA species and corresponding proteins. These results suggest that RNA profiling might provide indirect support to antibodies' specificity, since whenever a evident correlation between the RNA and protein profiles exists, this can sustain that the antibodies used in the immunoassay recognized their cognate antigens.

  5. Performance comparison of digital microRNA profiling technologies applied on human breast cancer cell lines.

    Directory of Open Access Journals (Sweden)

    Erik Knutsen

    Full Text Available MicroRNA profiling represents an important first-step in deducting individual RNA-based regulatory function in a cell, tissue, or at a specific developmental stage. Currently there are several different platforms to choose from in order to make the initial miRNA profiles. In this study we investigate recently developed digital microRNA high-throughput technologies. Four different platforms were compared including next generation SOLiD ligation sequencing and Illumina HiSeq sequencing, hybridization-based NanoString nCounter, and miRCURY locked nucleic acid RT-qPCR. For all four technologies, full microRNA profiles were generated from human cell lines that represent noninvasive and invasive tumorigenic breast cancer. This study reports the correlation between platforms, as well as a more extensive analysis of the accuracy and sensitivity of data generated when using different platforms and important consideration when verifying results by the use of additional technologies. We found all the platforms to be highly capable for microRNA analysis. Furthermore, the two NGS platforms and RT-qPCR all have equally high sensitivity, and the fold change accuracy is independent of individual miRNA concentration for NGS and RT-qPCR. Based on these findings we propose new guidelines and considerations when performing microRNA profiling.

  6. Applications of the Warren-Averbach method of X-ray diffraction line profile analysis

    International Nuclear Information System (INIS)

    Ichikawa, Rodrigo Uchida

    2013-01-01

    The objective of this work was to develop and implement a methodology of X-ray Line Profile Analysis (XLPA) for the study and determination of the mean crystallite sizes and microstrains in materials. A computer program was developed to speed up the treatment of diffraction peaks and perform the deconvolution utilizing the Stokes method to correct the instrumental contribution in the X-ray diffraction measurements. The XLPA methods used were the Scherrer, Williamson-Hall and Single-Line methods, which can be called real space methods, and the Fourier space method of Warren-Averbach. Furthermore, considering a mathematical modelling it was possible to calculate the crystallite size distribution, considering the log-normal distribution and spherical crystallites. It was possible to demonstrate the proposed theory can provide reliable results evaluating a dispersion parameter. The methodologies described above were applied in two distinct materials: in the alloy Zircaloy-4 and in ZnO. (author)

  7. Gain Enhancement of Low-Profile, Electrically Small Capacitive Feed Antennas Using Stacked Meander Lines

    Directory of Open Access Journals (Sweden)

    Kazuki Ide

    2010-01-01

    Full Text Available The present paper describes the gain enhancement of a small and low-profile linear antenna with capacitive feed (C-feed using three metallic layers. The antenna has very small leakage current on the outer conductor of the coaxial cable and can easily control the imaginary part of the input impedance. The gain of the stacked three-layer meander line antenna, with the meander line in the middle layer being opposite to that of the other two layers, has increased by around 7 dB compared to the single layered C-feed antenna. The antenna gain is discussed based on simulated and measured results, which demonstrates that the antenna has successfully achieved the acceptable impedance and sufficient gain for mobile terminals and RFID tags.

  8. Sizes of flaring kernels in various parts of the Hα line profile

    Directory of Open Access Journals (Sweden)

    K. Radziszewski

    2008-10-01

    Full Text Available In this paper we present new results of spectra-photometrical investigations of the flaring kernels' sizes and their intensities measured simultaneously in various parts of the Hα line profile. Our investigations were based on the very high temporal resolution spectral-imaging observations of the solar flares collected with Large Coronagraph (LC, Multi-channel Subtractive Double Pass Spectrograph and Solar Eclipse Coronal Imaging System (MSDP-SECIS at Białkow Observatory (University of Wrocław, Poland.

    We have found that the areas of the investigated individual flaring kernels vary in time and in wavelengths, as well as the intensities and areas of the Hα flaring kernels decreased systematically when observed in consecutive wavelengths toward the wings of the Hα line. Our result could be explained as an effect of the cone-shaped lower parts of the magnetic loops channeling high energy particle beams exciting chromospheric plasma.

  9. Gene expression profile of colon cancer cell lines treated with SN-38

    DEFF Research Database (Denmark)

    Wallin, A; Francis, P; Nilbert, M

    2010-01-01

    the incidence in fact has increased. To improve chemotherapy and enable personalised treatment, the need of biomarkers is of great significance. In this study, we evaluated the gene expression profiles of the colon cancer cell lines treated with SN-38, the active metabolite of topoisomerase-1 inhibitor......Colorectal cancer is the third most common form of cancer in the industrial countries. Due to advances regarding the treatments, primarily development of improved surgical methods and the ability to make the earlier diagnosis, the mortality has remained constant during the past decades even though...

  10. mRNA expression profile in DLD-1 and MOLT-4 cancer cell lines cultured under Microgravity

    Data.gov (United States)

    National Aeronautics and Space Administration — DLD-1 and MOLT-4 cell lines were cultured in a Rotating cell culture system to simulate microgravity and mRNA expression profile was observed in comparison to Static...

  11. Deep seismic profiling using off-line recorders, Miura Peninsula, Kanto, Japan.

    Science.gov (United States)

    Kawamura, T.; Hirata, N.; Sato, H.; Onishi, M.; Noda, K.

    2003-12-01

    The deep seismic profiling around Metropolitan Tokyo (Kanto area) began from 2002 under the project named . The deep seismic profiling was performed along the Tokyo Bay (Tokyo Bay 2003) from July to August in 2003, to obtain an image of the source fault of the Kanto earthquake of 1923 (M7.9), and deeper extension of inland active faults in Miura Peninsula. In the Tokyo Bay 2003, seismic reflection data were acquired along a 71-km-long seismic line from the Miura Peninsula to Tokyo Bay, using digital-telemetry cable system, including ocean bottom cables. However, this seismic line at Miura Peninsula passes through the densely populated area and due to the cultural noise the low S/N ratio was expected. Keeping away from the noise along the cable-type receiver line, 51 off-line recorders with a 4.5 Hz and 3-compornent geophone were deployed at carefully selected, quiet receiver points. During 90 days continuous recording, seismic signals produced by four vibroseis trucks at 195 locations and air-guns (1500 cu. inch) at 4280 locations were recorded including ca. 150 of earthquakes. Judging from the preliminary receiver gathers, two later phases (A and B) are recognized. The later phase A, located at TWT (Two-way travel time) 4 to 5.5 sec., is interpreted as a reflection from the top of the Philippine Sea Plate. The later phase B at TWT 7 to 8 sec. corresponds to the deeper reflection under the Philippine Sea Plate, respectively.

  12. Methane line shapes and spectral line parameters in the 5647 - 6164 cm-1 region

    Science.gov (United States)

    Kochanov, V. P.; Morino, I.

    2018-02-01

    Approximately seventy isolated and overlapping methane absorption lines in the 5647 - 6164 cm-1 spectral region were processed with seven line profiles accounting for all main line shape forming physical mechanisms in different combinations. It was shown that at low methane pressures the conventional Nelkin-Ghatak line profile gives satisfactory results in retrieving line parameters as opposed to the Voigt profile. It was found that most of the considered lines do not interfere. The FTS instrumental function elimination technique based on Doppler-broadened line's records was applied, and its applicability was proved.

  13. In-line height profiling metrology sensor for zero defect production control

    Science.gov (United States)

    Snel, Rob; Winters, Jasper; Liebig, Thomas; Jonker, Wouter

    2017-06-01

    Contemporary production systems of mechanical precision parts show challenges as increased complexity, tolerances shrinking to sub-microns and yield losses that must be mastered to the extreme. More advanced automation and process control is required to accomplish this task. Often a solution based on feedforward/feedback control is chosen requiring innovative and more advanced in line metrology. This article concentrates first on the context of in line metrology for process control and then on the development of a specific in line height profiling sensor. The novel sensor technology is based on full field time domain white light interferometry which is well know from the quality lab. The novel metrology system is to be mounted close to the production equipment, as required to minimize time delay in the control loop, and is thereby fully exposed to vibrations. This sensor is innovated to perform in line with an orders of magnitude faster throughput than laboratory instruments; it's robust to withstand the rigors of workshops and has a height resolution that is in the nanometer range.

  14. SNP array profiling of mouse cell lines identifies their strains of origin and reveals cross-contamination and widespread aneuploidy.

    Science.gov (United States)

    Didion, John P; Buus, Ryan J; Naghashfar, Zohreh; Threadgill, David W; Morse, Herbert C; de Villena, Fernando Pardo-Manuel

    2014-10-03

    The crisis of Misidentified and contaminated cell lines have plagued the biological research community for decades. Some repositories and journals have heeded calls for mandatory authentication of human cell lines, yet misidentification of mouse cell lines has received little publicity despite their importance in sponsored research. Short tandem repeat (STR) profiling is the standard authentication method, but it may fail to distinguish cell lines derived from the same inbred strain of mice. Additionally, STR profiling does not reveal karyotypic changes that occur in some high-passage lines and may have functional consequences. Single nucleotide polymorphism (SNP) profiling has been suggested as a more accurate and versatile alternative to STR profiling; however, a high-throughput method for SNP-based authentication of mouse cell lines has not been described. We have developed computational methods (Cell Line Authentication by SNP Profiling, CLASP) for cell line authentication and copy number analysis based on a cost-efficient SNP array, and we provide a reference database of commonly used mouse strains and cell lines. We show that CLASP readily discriminates among cell lines of diverse taxonomic origins, including multiple cell lines derived from a single inbred strain, intercross or wild caught mouse. CLASP is also capable of detecting contaminants present at concentrations as low as 5%. Of the 99 cell lines we tested, 15 exhibited substantial divergence from the reported genetic background. In all cases, we were able to distinguish whether the authentication failure was due to misidentification (one cell line, Ba/F3), the presence of multiple strain backgrounds (five cell lines), contamination by other cells and/or the presence of aneuploid chromosomes (nine cell lines). Misidentification and contamination of mouse cell lines is potentially as widespread as it is in human cell culture. This may have substantial implications for studies that are dependent on the

  15. Theoretical investigation of the broad one-photon absorption line-shape of a flexible symmetric carbazole derivative.

    Science.gov (United States)

    Liu, Yanli; Cerezo, Javier; Santoro, Fabrizio; Rizzo, Antonio; Lin, Na; Zhao, Xian

    2016-08-17

    The one-photon absorption spectrum of a carbazole derivative has been studied by employing density functional response theory combined with a mixed quantum/classical (QC) approach to simulate the spectral shape. In a first step of our analysis we employed the vertical gradient (VG) vibronic model to investigate the role of Franck-Condon (FC) profiles of the first ten electronic excited states of the system, underlying most of the range of the experimental spectrum. We then focussed on the first six excited states covering the low-energy region of the spectrum, and investigated the effect of inter-state electronic couplings on the spectral shapes within Herzberg-Teller (HT) theory. Furthermore, in order to introduce the broadening effects due to the two inter-ring torsions, we employed a QC approach, adopting VG vibronic models for high-frequency modes and computing the contribution of the torsions to the spectrum from the distribution of the excitation energies along a two-dimensional relaxed potential energy. Finally, we estimated the solvent inhomogeneous broadening by computing the solvent reorganization energy using a polarizable continuum model. Our calculations allow us to obtain a non-phenomenological description of the low-energy part of the spectrum in semi-quantitative agreement with experiment and to dissect the relative importance of solvent, torsional flexibility, FC vibronic progressions, and inter-state couplings in determining its broad spectral shapes and the modulation of its intensity. Our analysis also clearly highlights that the investigated carbazole represents a big challenge for available methodologies due to the existence of many close-lying excited electronic states coupled by internal low-frequency and high-frequency motions and by solvent fluctuations. The study of their impact on the spectra at the HT level is only approximate and more refined treatments would require a fully quantum-dynamical calculation on the manifold of the coupled

  16. Numerical Evaluation of Parameter Correlation in the Hartmann-Tran Line Profile

    Science.gov (United States)

    Adkins, Erin M.; Reed, Zachary; Hodges, Joseph T.

    2017-06-01

    The partially correlated quadratic, speed-dependent hard-collision profile (pCqSDHCP), for simplicity referred to as the Hartmann-Tran profile (HTP), has been recommended as a generalized lineshape for high resolution spectroscopy. The HTP parameterizes complex collisional effects such as Dicke narrowing, speed dependent narrowing, and correlations between velocity-changing and dephasing collisions, while also simplifying to simpler profiles that are widely used, such as the Voigt profile. As advanced lineshape profiles are adopted by more researchers, it is important to understand the limitations that data quality has on the ability to retrieve physically meaningful parameters using sophisticated lineshapes that are fit to spectra of finite signal-to-noise ratio. In this work, spectra were simulated using the HITRAN Application Programming Interface (HAPI) across a full range of line parameters. Simulated spectra were evaluated to quantify the precision with which fitted lineshape parameters can be determined at a given signal-to-noise ratio, focusing on the numerical correlation between the retrieved Dicke narrowing frequency and the velocity-changing and dephasing collisions correlation parameter. Tran, H., N. Ngo, and J.-M. Hartmann, Journal of Quantitative Spectroscopy and Radiative Transfer 2013. 129: p. 89-100. Tennyson, et al., Pure Appl. Chem. 2014, 86: p. 1931-1943. Kochanov, R.V., et al., Journal of Quantitative Spectroscopy and Radiative Transfer 2016. 177: p. 15-30. Tran, H., N. Ngo, and J.-M. Hartmann, Journal of Quantitative Spectroscopy and Radiative Transfer 2013. 129: p. 199-203.

  17. A CpG island hypermethylation profile of primary colorectal carcinomas and colon cancer cell lines

    Directory of Open Access Journals (Sweden)

    Rognum Torleiv O

    2004-10-01

    Full Text Available Abstract Background Tumor cell lines are commonly used as experimental tools in cancer research, but their relevance for the in vivo situation is debated. In a series of 11 microsatellite stable (MSS and 9 microsatellite unstable (MSI colon cancer cell lines and primary colon carcinomas (25 MSS and 28 MSI with known ploidy stem line and APC, KRAS, and TP53 mutation status, we analyzed the promoter methylation of the following genes: hMLH1, MGMT, p16INK4a (CDKN2A α-transcript, p14ARF (CDKN2A β-transcript, APC, and E-cadherin (CDH1. We compared the DNA methylation profiles of the cell lines with those of the primary tumors. Finally, we examined if the epigenetic changes were associated with known genetic markers and/or clinicopathological variables. Results The cell lines and primary tumors generally showed similar overall distribution and frequencies of gene methylation. Among the cell lines, 15%, 50%, 75%, 65%, 20% and 15% showed promoter methylation for hMLH1, MGMT, p16INK4a, p14ARF, APC, and E-cadherin, respectively, whereas 21%, 40%, 32%, 38%, 32%, and 40% of the primary tumors were methylated for the same genes. hMLH1 and p14ARF were significantly more often methylated in MSI than in MSS primary tumors, whereas the remaining four genes showed similar methylation frequencies in the two groups. Methylation of p14ARF, which indirectly inactivates TP53, was seen more frequently in tumors with normal TP53 than in mutated samples, but the difference was not statistically significant. Methylation of p14ARF and p16INK4a was often present in the same primary tumors, but association to diploidy, MSI, right-sided location and female gender was only significant for p14ARF. E-cadherin was methylated in 14/34 tumors with altered APC further stimulating WNT signaling. Conclusions The present study shows that colon cancer cell lines are in general relevant in vitro models, comparable with the in vivo situation, as the cell lines display many of the same

  18. The profiles of Fe K α line from the inhomogeneous accretion flow

    Science.gov (United States)

    Yu, Xiao-Di; Ma, Ren-Yi; Li, Ya-Ping; Zhang, Hui; Fang, Tao-Tao

    2018-05-01

    The clumpy disc, or inhomogeneous accretion flow, has been proposed to explain the properties of accreting black hole systems. However, the observational evidence remains to be explored. In this work, we calculate the profiles of Fe K α lines emitted from the inhomogeneous accretion flow through the ray-tracing technique, in order to find possible observable signals of the clumps. Compared with the skewed double-peaked profile of the continuous standard accretion disc, the lines show a multipeak structure when the emissivity index is not very steep. The peaks and wings are affected by the position and size of the cold clumps. When the clump is small and is located in the innermost region, due to the significant gravitational redshift, the blue wing can overlap with the red wing of the outer cold disc/clump, forming a fake peak or greatly enhancing the red peak. Given high enough resolution, it is easier to constrain the clumps around the supermassive black holes than the clumps in stellar mass black holes due to the thermal Doppler effect.

  19. The Profiles of Fe Kα Line From the Inhomogeneous Accretion Flow

    Science.gov (United States)

    Yu, Xiao-Di; Ma, Ren-Yi; Li, Ya-Ping; Zhang, Hui; Fang, Tao-Tao

    2018-02-01

    The clumpy disc, or inhomogeneous accretion flow, has been proposed to explain the properties of accreting black hole systems. However, the observational evidences remain to be explored. In this work, we calculate the profiles of Fe Kα lines emitted from the inhomogeneous accretion flow through the ray-tracing technique, in order to find possible observable signals of the clumps. Compared with the skewed double-peaked profile of the continuous standard accretion disc, the lines show a multi-peak structure when the emissivity index is not very steep. The peaks and wings are affected by the position and size of the cold clumps. When the clump is small and is located in the innermost region, due to the significant gravitational redshift, the blue wing can overlap with the red wing of the outer cold disc/clump, forming a fake peak or greatly enhancing the red peak. Given high enough resolution, it is easier to constrain the clumps around the supermassive black holes than the clumps in stellar mass black holes due to the thermal Doppler effect.

  20. Broad absorption line disappearance and emergence using multiple-epoch spectroscopy from the Sloan Digital Sky Survey

    Science.gov (United States)

    McGraw, S. M.; Brandt, W. N.; Grier, C. J.; Filiz Ak, N.; Hall, P. B.; Schneider, D. P.; Anderson, S. F.; Green, P. J.; Hutchinson, T. A.; Macleod, C. L.; Vivek, M.

    2017-08-01

    We investigate broad absorption line (BAL) disappearance and emergence using a 470 BAL-quasar sample over ≤0.10-5.25 rest-frame years with at least three spectroscopic epochs for each quasar from the Sloan Digital Sky Survey. We identify 14 disappearing BALs over ≤1.73-4.62 rest-frame years and 18 emerging BALs over ≤1.46-3.66 rest-frame years associated with the C IV λλ1548,1550 and/or Si IV λλ1393,1402 doublets, and report on their variability behaviour. BAL quasars in our data set exhibit disappearing/emerging C IV BALs at a rate of 2.3^{+0.9}_{-0.7} and 3.0^{+1.0}_{-0.8} per cent, respectively, and the frequency for BAL to non-BAL quasar transitions is 1.7^{+0.8}_{-0.6} per cent. We detect four re-emerging BALs over ≤3.88 rest-frame years on average and three re-disappearing BALs over ≤4.15 rest-frame years on average, the first reported cases of these types. We infer BAL lifetimes along the line of sight to be nominally ≲ 100-1000 yr using disappearing C IV BALs in our sample. Interpretations of (re-)emerging and (re-)disappearing BALs reveal evidence that collectively supports both transverse-motion and ionization-change scenarios to explain BAL variations. We constrain a nominal C IV/Si IV BAL-outflow location of ≲ 100 pc from the central source and a radial size of ≳ 1× 10-7 pc (0.02 au) using the ionization-change scenario, and constrain a nominal outflow location of ≲ 0.5 pc and a transverse size of ˜0.01 pc using the transverse-motion scenario. Our findings are consistent with previous work, and provide evidence in support of BALs tracing compact flow geometries with small filling factors.

  1. The Stellar Initial Mass Function in Early-type Galaxies from Absorption Line Spectroscopy. I. Data and Empirical Trends

    Science.gov (United States)

    van Dokkum, Pieter G.; Conroy, Charlie

    2012-11-01

    The strength of gravity-sensitive absorption lines in the integrated light of old stellar populations is one of the few direct probes of the stellar initial mass function (IMF) outside of the Milky Way. Owing to the advent of fully depleted CCDs with little or no fringing it has recently become possible to obtain accurate measurements of these features. Here, we present spectra covering the wavelength ranges 0.35-0.55 μm and 0.72-1.03 μm for the bulge of M31 and 34 early-type galaxies from the SAURON sample, obtained with the Low Resolution Imaging Spectrometer on Keck. The signal-to-noise ratio is >~ 200 Å-1 out to 1 μm, which is sufficient to measure gravity-sensitive features for individual galaxies and to determine how they depend on other properties of the galaxies. Combining the new data with previously obtained spectra for globular clusters in M31 and the most massive elliptical galaxies in the Virgo cluster, we find that the dwarf-sensitive Na I λ8183, 8195 doublet and the FeH λ9916 Wing-Ford band increase systematically with velocity dispersion, while the giant-sensitive Ca II λ8498, 8542, 8662 triplet decreases with dispersion. These trends are consistent with a varying IMF, such that galaxies with deeper potential wells have more dwarf-enriched mass functions. In a companion paper, we use a comprehensive stellar population synthesis model to demonstrate that IMF effects can be separated from age and abundance variations and quantify the IMF variation among early-type galaxies.

  2. THE STELLAR INITIAL MASS FUNCTION IN EARLY-TYPE GALAXIES FROM ABSORPTION LINE SPECTROSCOPY. I. DATA AND EMPIRICAL TRENDS

    International Nuclear Information System (INIS)

    Van Dokkum, Pieter G.; Conroy, Charlie

    2012-01-01

    The strength of gravity-sensitive absorption lines in the integrated light of old stellar populations is one of the few direct probes of the stellar initial mass function (IMF) outside of the Milky Way. Owing to the advent of fully depleted CCDs with little or no fringing it has recently become possible to obtain accurate measurements of these features. Here, we present spectra covering the wavelength ranges 0.35-0.55 μm and 0.72-1.03 μm for the bulge of M31 and 34 early-type galaxies from the SAURON sample, obtained with the Low Resolution Imaging Spectrometer on Keck. The signal-to-noise ratio is ∼> 200 Å –1 out to 1 μm, which is sufficient to measure gravity-sensitive features for individual galaxies and to determine how they depend on other properties of the galaxies. Combining the new data with previously obtained spectra for globular clusters in M31 and the most massive elliptical galaxies in the Virgo cluster, we find that the dwarf-sensitive Na I λ8183, 8195 doublet and the FeH λ9916 Wing-Ford band increase systematically with velocity dispersion, while the giant-sensitive Ca II λ8498, 8542, 8662 triplet decreases with dispersion. These trends are consistent with a varying IMF, such that galaxies with deeper potential wells have more dwarf-enriched mass functions. In a companion paper, we use a comprehensive stellar population synthesis model to demonstrate that IMF effects can be separated from age and abundance variations and quantify the IMF variation among early-type galaxies.

  3. Evidence for ultra-fast outflows in radio-quiet AGNs. I. Detection and statistical incidence of Fe K-shell absorption lines

    Science.gov (United States)

    Tombesi, F.; Cappi, M.; Reeves, J. N.; Palumbo, G. G. C.; Yaqoob, T.; Braito, V.; Dadina, M.

    2010-10-01

    Context. Blue-shifted Fe K absorption lines have been detected in recent years between 7 and 10 keV in the X-ray spectra of several radio-quiet AGNs. The derived blue-shifted velocities of the lines can often reach mildly relativistic values, up to 0.2-0.4c. These findings are important because they suggest the presence of a previously unknown massive and highly ionized absorbing material outflowing from their nuclei, possibly connected with accretion disk winds/outflows. Aims: The scope of the present work is to statistically quantify the parameters and incidence of the blue-shifted Fe K absorption lines through a uniform analysis on a large sample of radio-quiet AGNs. This allows us to assess their global detection significance and to overcome any possible publication bias. Methods: We performed a blind search for narrow absorption features at energies greater than 6.4 keV in a sample of 42 radio-quiet AGNs observed with XMM-Newton. A simple uniform model composed by an absorbed power-law plus Gaussian emission and absorption lines provided a good fit for all the data sets. We derived the absorption lines parameters and calculated their detailed detection significance making use of the classical F-test and extensive Monte Carlo simulations. Results: We detect 36 narrow absorption lines on a total of 101 XMM-Newton EPIC pn observations. The number of absorption lines at rest-frame energies higher than 7 keV is 22. Their global probability to be generated by random fluctuations is very low, less than 3 × 10-8, and their detection have been independently confirmed by a spectral analysis of the MOS data, with associated random probability UFOs) those highly ionized absorbers with outflow velocities higher than 104 km s-1, then the majority of the lines are consistent with being associated to UFOs and the fraction of objects with detected UFOs in the whole sample is at least ~35%. This fraction is similar for type 1 and type 2 sources. The global covering fraction of

  4. Radiation Changes the Metabolic Profiling of Melanoma Cell Line B16.

    Directory of Open Access Journals (Sweden)

    Lige Wu

    Full Text Available Radiation therapy can be an effective way to kill cancer cells using ionizing radiation, but some tumors are resistant to radiation therapy and the underlying mechanism still remains elusive. It is therefore necessary to establish an appropriate working model to study and monitor radiation-mediated cancer therapy. In response to cellular stress, the metabolome is the integrated profiling of changes in all metabolites in cells, which can be used to investigate radiation tolerance mechanisms and identify targets for cancer radiation sensibilization. In this study, using 1H nuclear magnetic resonance for untargeted metabolic profiling in radiation-tolerant mouse melanoma cell line B16, we comprehensively investigated changes in metabolites and metabolic network in B16 cells in response to radiation. Principal component analysis and partial least squares discriminant analysis indicated the difference in cellular metabolites between the untreated cells and X-ray radiated cells. In radiated cells, the content of alanine, glutamate, glycine and choline was increased, while the content of leucine, lactate, creatine and creatine phosphate was decreased. Enrichment analysis of metabolic pathway showed that the changes in metabolites were related to multiple metabolic pathways including the metabolism of glycine, arginine, taurine, glycolysis, and gluconeogenesis. Taken together, with cellular metabolome study followed by bioinformatic analysis to profile specific metabolic pathways in response to radiation, we deepened our understanding of radiation-resistant mechanisms and radiation sensibilization in cancer, which may further provide a theoretical and practical basis for personalized cancer therapy.

  5. Differential Expression Profiles of the Transcriptome in Breast Cancer Cell Lines Revealed by Next Generation Sequencing

    Directory of Open Access Journals (Sweden)

    Yu Shi

    2017-11-01

    Full Text Available Background/Aims: As MCF-7 and MDA-MB-231 cells are the typical cell lines of two clinical breast tumour subtypes, the aim of the present study was to elucidate the transcriptome differences between MCF-7 and MDA-MB-231 breast cancer cell lines. Methods: The mRNA, miRNA (MicroRNA and lncRNA (Long non-coding RNA expression profiles were examined using NGS (next generation sequencing instrument Illumina HiSeq-2500. GO (Gene Ontology and KEGG (Kyoto Encyclopedia of Genes and Genomes pathway analyses were performed to identify the biological functions of differentially expressed coding RNAs. Subsequently, we constructed an mRNA-ncRNA (non-coding RNA targeting regulatory network. Finally, we performed RT-qPCR (real-time quantitative PCR to confirm the NGS results. Results: There are sharp distinctions of the coding and non-coding RNA profiles between MCF-7 and MDA-MB-231 cell lines. Among the mRNAs and ncRNAs with the most differential expression, SLPI, SOD2, miR-7, miR-143 and miR-145 were highly expressed in MCF-7 cells, while CD55, KRT17, miR-21, miR-10b, miR-9, NEAT1 and PICSAR were over-expressed in MDA-MB-231 cells. Differentially expressed mRNAs are primarily involved in biological processes of locomotion, biological adhesion, ECM-receptor interaction pathway and focal adhesion. In the targeting regulatory network of differentially expressed RNAs, mRNAs and miRNAs are primarily associated with tumour metastasis, but the functions of lncRNAs remain uncharacterized. Conclusion: These results provide a basis for future studies of breast cancer metastasis and drug resistance.

  6. Analysis on Energy Conversion of Screw Centrifugal Pump in Impeller Domain Based on Profile Lines

    Directory of Open Access Journals (Sweden)

    Hui Quan

    2013-01-01

    Full Text Available In order to study the power capability of impeller and energy conversion mechanism of screw centrifugal pump, the methods of theoretical analysis and numerical simulation by computational fluid dynamics theory (CFD were adopted, specifically discussing the conditions of internal flow such as velocity, pressure, and concentration. When the medium is sand-water two-phase flow and dividing the rim of the lines and wheel lines of screw centrifugal pump to segments to analyze energy conversion capabilities which along the impeller profile lines with the dynamic head and hydrostatic head changer, the results show that the energy of fluid of the screw centrifugal pump is provided by helical segment, and the helical segment of the front of the impeller has played the role of multilevel increasing energy; the sand-water two phases move at different speeds because the different force field and the impeller propeller and centrifugal effect. As liquid phase is the primary phase, the energy conversion is mainly up to the change of liquid energy, the solid phase flows under the wrapped action of liquid, and solid energy is carried out through liquid indirectly.

  7. Multi-omic profiling of MYCN-amplified neuroblastoma cell-lines

    Directory of Open Access Journals (Sweden)

    Erik Dassi

    2015-12-01

    Full Text Available Neuroblastoma is the most common pediatric cancer, arising from the neural crest cells of the sympathetic nervous system. Its most aggressive subtype, characterized by the amplification of the MYCN oncogene, has a dismal prognosis and no effective treatment is available. Understanding the alterations induced by the tumor on the various layers of gene expression is therefore important for a complete characterization of this neuroblastoma subtype and for the discovery of new therapeutic opportunities. Here we describe the profiling of 13 MYCN-amplified neuroblastoma cell lines at the genome (copy number, transcriptome, translatome and miRome levels (GEO series GSE56654, GSE56552 and GSE56655. We provide detailed experimental and data analysis procedures by means of which we derived the results described in [1].

  8. Intensity radial profiles of VUV line radiation near the solid target in a hot plasma

    Science.gov (United States)

    Piffl, V.; Weinzettl, V.; Burdakov, A.; Polosatkin, S. V.

    2004-03-01

    An investigation of hot plasma interaction with solid target is carried out at the CASTOR tokamak (IPP Prague) and the GOL-3 multi-mirror magnetic trap faccility (Budker Institute, Novosibirsk) [1], [5]. In both experiments, the Imaging Seya-Namioka Spectrometer based on a spherical dispersion grating has been upraded to monitor the radial profiles of the chord-integrated low- Z impurity line intensities in VUV spectral range. Such spatial resolved intensity monitoring in radial direction together with application of the radiation code simulation allows obtaining a radial distribution of ions of different ionization stages near the target immersed in edge plasma. The energy release from plasma to the target is order of 100 J/m2 in the CASTOR tokamak and 30 MJ/m2 int he GOL-3 magnetic open confinement system.

  9. Experimental study of the variation of spectrum line profiles with time (1962)

    International Nuclear Information System (INIS)

    Laval, G.; Pellat, R.

    1962-01-01

    This study relates to a device conceived by C. BRETON, M. CAPET and F. WAELBROECK and submitted at the Fifth International Conference on Ionization Phenomena in Gases (Munich 1961). To calibrate the device and to know its accurate possibilities, noise in photomultipliers had to be investigated. For weak light signals this investigation has shown that the Schottky effect explains this noise and that there is a strict relation between the time resolution and the accuracy of the results. These results are applied to measurements of Stark Effect broadening of the Dβ line emitted by the plasma of an electrode-less-gun. The densities calculated from the experimental profiles are in good agreement with the densities calculated from magnetic measurements. (authors) [fr

  10. Hydrogen Balmer alpha intensity distributions and line profiles from multiple scattering theory using realistic geocoronal models

    Science.gov (United States)

    Anderson, D. E., Jr.; Meier, R. R.; Hodges, R. R., Jr.; Tinsley, B. A.

    1987-01-01

    The H Balmer alpha nightglow is investigated by using Monte Carlo models of asymmetric geocoronal atomic hydrogen distributions as input to a radiative transfer model of solar Lyman-beta radiation in the thermosphere and atmosphere. It is shown that it is essential to include multiple scattering of Lyman-beta radiation in the interpretation of Balmer alpha airglow data. Observations of diurnal variation in the Balmer alpha airglow showing slightly greater intensities in the morning relative to evening are consistent with theory. No evidence is found for anything other than a single sinusoidal diurnal variation of exobase density. Dramatic changes in effective temperature derived from the observed Balmer alpha line profiles are expected on the basis of changing illumination conditions in the thermosphere and exosphere as different regions of the sky are scanned.

  11. Leptosphaeria maculans Alters Glucosinolate Profiles in Blackleg Disease–Resistant and -Susceptible Cabbage Lines

    Directory of Open Access Journals (Sweden)

    Arif Hasan Khan Robin

    2017-10-01

    Full Text Available Blackleg, a fungal disease caused by Leptosphaeria maculans, is one of the most devastating diseases of Brassica crops worldwide. Despite notable progress elucidating the roles of glucosinolates in pathogen defense, the complex interaction between B. oleracea (cabbage and L. maculans infection that leads to the selective induction of genes involved in glucosinolate production and subsequent modulation of glucosinolate profiles remains to be fully understood. The current study was designed to identify glucosinolate-biosynthesis genes induced by L. maculans and any associated alterations in glucosinolate profiles to explore their roles in blackleg resistance in 3-month-old cabbage plants. The defense responses of four cabbage lines, two resistant and two susceptible, were investigated using two L. maculans isolates, 03–02 s and 00–100 s. A simultaneous increase in the aliphatic glucosinolates glucoiberverin (GIV and glucoerucin (GER and the indolic glucosinolates glucobrassicin (GBS and neoglucobrassicin (NGBS was associated with complete resistance. An increase in either aliphatic (GIV or indolic (GBS and MGBS glucosinolates was associated with moderate resistance. Indolic glucobrassicin (GBS and neoglucobrassicin (NGBS were increased in both resistant and susceptible interactions. Pearson correlation showed positive association between GER content with GSL-OH (Bol033373 expression. Expressions of MYB34 (Bol007760, ST5a (Bol026200, and CYP81F2 (Bol026044 were positively correlated with the contents of both GBS and MGBS. Our results confirm that L. maculans infection induces glucosinolate-biosynthesis genes in cabbage, with concomitant changes in individual glucosinolate contents. In resistant lines, both aliphatic and indolic glucosinolates are associated with resistance, with aliphatic GIV and GER and indolic MGBS glucosinolates particularly important. The association between the genes, the corresponding glucosinolates, and plant resistance

  12. Metrology of variable-line-spacing x-ray gratings using the APS Long Trace Profiler

    Science.gov (United States)

    Sheung, Janet; Qian, Jun; Sullivan, Joseph; Thomasset, Muriel; Manton, Jonathan; Bean, Sunil; Takacs, Peter; Dvorak, Joseph; Assoufid, Lahsen

    2017-09-01

    As resolving power targets have increased with each generation of beamlines commissioned in synchrotron radiation facilities worldwide, diffraction gratings are quickly becoming crucial optical components for meeting performance targets. However, the metrology of variable-line-spacing (VLS) gratings for high resolution beamlines is not widespread; in particular, no metrology facility at any US DOE facility is currently equipped to fully characterize such gratings. To begin to address this issue, the Optics Group at the Advanced Photon Source at Argonne, in collaboration with SOLEIL and with support from Brookhaven National Laboratory (BNL), has developed an alternative beam path addition to the Long Trace Profiler (LTP) at Argonne's Advanced Photon Source. This significantly expands the functionality of the LTP not only to measure mirrors surface slope profile at normal incidence, but also to characterize the groove density of VLS diffraction gratings in the Littrow incidence up to 79°, which covers virtually all diffraction gratings used at synchrotrons in the first order. The LTP light source is a 20mW HeNe laser, which yields enough signal for diffraction measurements to be performed on low angle blazed gratings optimized for soft X-ray wavelengths. We will present the design of the beam path, technical requirements for the optomechanics, and our data analysis procedure. Finally, we discuss challenges still to be overcome and potential limitations with use of the LTP to perform metrology on diffraction gratings.

  13. Gene expression profiles in asbestos-exposed epithelial and mesothelial lung cell lines

    Directory of Open Access Journals (Sweden)

    Kaski Samuel

    2007-03-01

    Full Text Available Abstract Background Asbestos has been shown to cause chromosomal damage and DNA aberrations. Exposure to asbestos causes many lung diseases e.g. asbestosis, malignant mesothelioma, and lung cancer, but the disease-related processes are still largely unknown. We exposed the human cell lines A549, Beas-2B and Met5A to crocidolite asbestos and determined time-dependent gene expression profiles by using Affymetrix arrays. The hybridization data was analyzed by using an algorithm specifically designed for clustering of short time series expression data. A canonical correlation analysis was applied to identify correlations between the cell lines, and a Gene Ontology analysis method for the identification of enriched, differentially expressed biological processes. Results We recognized a large number of previously known as well as new potential asbestos-associated genes and biological processes, and identified chromosomal regions enriched with genes potentially contributing to common responses to asbestos in these cell lines. These include genes such as the thioredoxin domain containing gene (TXNDC and the potential tumor suppressor, BCL2/adenovirus E1B 19kD-interacting protein gene (BNIP3L, GO-terms such as "positive regulation of I-kappaB kinase/NF-kappaB cascade" and "positive regulation of transcription, DNA-dependent", and chromosomal regions such as 2p22, 9p13, and 14q21. We present the complete data sets as Additional files. Conclusion This study identifies several interesting targets for further investigation in relation to asbestos-associated diseases.

  14. Non-Maxwellian Analysis of the Transition-region Line Profiles Observed by the Interface Region Imaging Spectrograph

    Energy Technology Data Exchange (ETDEWEB)

    Dudík, Jaroslav; Dzifčáková, Elena [Astronomical Institute of the Czech Academy of Sciences, Fričova 298, 251 65 Ondřejov (Czech Republic); Polito, Vanessa; Testa, Paola [Smithsonian Astrophysical Observatory, 60 Garden Street, MS 58, Cambridge, MA 02138 (United States); Zanna, Giulio Del, E-mail: dudik@asu.cas.cz [Department of Applied Mathematics and Theoretical Physics, CMS, University of Cambridge, Wilberforce Road, Cambridge CB3 0WA (United Kingdom)

    2017-06-10

    We investigate the nature of the spectral line profiles for transition-region (TR) ions observed with the Interface Region Imaging Spectrograph (IRIS) . In this context, we analyzed an active-region observation performed by IRIS in its 1400 Å spectral window. The TR lines are found to exhibit significant wings in their spectral profiles, which can be well fitted with a non-Maxwellian κ distribution. The fit with a κ distribution can perform better than a double-Gaussian fit, especially for the strongest line, Si iv 1402.8 Å. Typical values of κ found are about 2, occurring in a majority of spatial pixels where the TR lines are symmetric, i.e., the fit can be performed. Furthermore, all five spectral lines studied (from Si iv, O iv, and S iv) appear to have the same full-width at half-maximum irrespective of whether the line is an allowed or an intercombination transition. A similar value of κ is obtained for the electron distribution by the fitting of the line intensities relative to Si iv 1402.8 Å, if photospheric abundances are assumed. The κ distributions, however, do not remove the presence of non-thermal broadening. Instead, they actually increase the non-thermal width. This is because, for κ distributions, TR ions are formed at lower temperatures. The large observed non-thermal width lowers the opacity of the Si iv line sufficiently enough for this line to become optically thin.

  15. Face-to-Face vs On-line: An analysis of Profile, Learning, Performance and Satisfaction among Post Graduate Students

    OpenAIRE

    Ortega-Maldonado, Alberto; Llorens, Susana; Acosta Antognoni, Hedy; Coo Calcagni, Cristian

    2017-01-01

    The aim of this study is to explore the differences between face-to-face and on-line students in a post graduate education program. The variables considered are Post Graduate Student's profile, competences and learning outcomes, academic performance and satisfaction. The sample was composed by 47 students (64% face-to-face). Analysis of variance (ANOVA) and student's t utilizing SPPS Statistics 22.0 were performed. Results showed differences in all variables: (i) Regarding student profile, fa...

  16. The morphologies of breast cancer cell lines in three-dimensionalassays correlate with their profiles of gene expression

    Energy Technology Data Exchange (ETDEWEB)

    Kenny, Paraic A.; Lee, Genee Y.; Myers, Connie A.; Neve, RichardM.; Semeiks, Jeremy R.; Spellman, Paul T.; Lorenz, Katrin; Lee, Eva H.; Barcellos-Hoff, Mary Helen; Petersen, Ole W.; Gray, Joe W.; Bissell, MinaJ.

    2007-01-31

    3D cell cultures are rapidly becoming the method of choice for the physiologically relevant modeling of many aspects of non-malignant and malignant cell behavior ex vivo. Nevertheless, only a limited number of distinct cell types have been evaluated in this assay to date. Here we report the first large scale comparison of the transcriptional profiles and 3D cell culture phenotypes of a substantial panel of human breast cancer cell lines. Each cell line adopts a colony morphology of one of four main classes in 3D culture. These morphologies reflect, at least in part, the underlying gene expression profile and protein expression patterns of the cell lines, and distinct morphologies were also associated with tumor cell invasiveness and with cell lines originating from metastases. We further demonstrate that consistent differences in genes encoding signal transduction proteins emerge when even tumor cells are cultured in 3D microenvironments.

  17. Multicomponent Analysis of the UV Si IV and C IV Broad Absorption ...

    Indian Academy of Sciences (India)

    2016-01-27

    density enhancements) that move radially and intercept the line-of-sight to the central continuum source. Using our method, we find the number of absorption components needed to simulate the BAL profiles, which means the ...

  18. Energy Absorption of Distribution Line Arresters due to Lightning Back Flow Current and Ground Potential Rise for Lightning Hit to Wind Turbine Generator System

    Science.gov (United States)

    Okamoto, Hiroshi; Sekioka, Shozo; Ebinuma, Yasumitsu; Yamamoto, Kazuo; Yasuda, Yoh; Funabashi, Toshihisa; Yokoyama, Shigeru

    In the coast of the Japan Sea which has many good places for wind turbine generator system, winter lightning occurs frequently. Many results of investigation have been reported not only damages of wind turbine generator system itself but also failures of distribution line arresters caused by part of the lightning current which flows into distribution lines when the customer's structure is struck by lightning. The lightning back flow current and ground potential rise are also important factors for a lightning protection design of distribution line arresters, which are connected to the wind turbine generator system struck by lightning. This paper describes simulation results of the energy absorption to estimate the lightning damages in the arresters considering the back flow current and the ground potential rise using the EMTP.

  19. Probing autoionizing states of molecular oxygen with XUV transient absorption: Electronic-symmetry-dependent line shapes and laser-induced modifications

    Science.gov (United States)

    Liao, Chen-Ting; Li, Xuan; Haxton, Daniel J.; Rescigno, Thomas N.; Lucchese, Robert R.; McCurdy, C. William; Sandhu, Arvinder

    2017-04-01

    We used extreme ultraviolet (XUV) transient absorption spectroscopy to study the autoionizing Rydberg states of oxygen in an electronically- and vibrationally-resolved fashion. XUV pulse initiates molecular polarization and near-infrared pulse perturbs its evolution. Transient absorption spectra show positive optical-density (OD) change in the case of n s σg and n d πg autoionizing states of oxygen and negative OD change for n d σg states. Multiconfiguration time-dependent Hartree-Fock (MCTDHF) calculations are used to simulate the transient absorption and the resulting spectra and temporal evolution agree with experimental observations. We model the effect of near-infrared perturbation on molecular polarization and find that the laser-induced phase-shift model agrees with the experimental and MCTDHF results, while the laser-induced attenuation model does not. We relate the electronic-state-symmetry-dependent sign of the OD change to the Fano parameters of the static absorption line shapes.

  20. Measurement of the electron temperature profiles in the F-1 cold gas blanket experiment by hydrogen line-spectroscopy

    International Nuclear Information System (INIS)

    Kuthy, A.

    1981-01-01

    Radial profiles of the electron temperature in the F-1 device were determined by measurements of the hydrogen Balmer β-line intensity. The F-1 device produces plasmas in the parameter range of cold gas blankets. The measured temperatures were in agreement with earlier theoretical estimates. The temperature amplitudes and profile shapes were strongly dependent on the power input. The neutral penetration length was dominated by temperature profile effects. The temperature of the ionization zone was essentially constant at 2.5 eV independent of the peak temperature. (orig.)

  1. MISALIGNMENT OF THE JET AND THE NORMAL TO THE DUSTY TORUS IN THE BROAD ABSORPTION LINE QSO FIRST J155633.8+351758

    International Nuclear Information System (INIS)

    Reynolds, Cormac; Punsly, Brian; O'Dea, Christopher P.

    2013-01-01

    We performed Very Long Baseline Array observations of the broad absorption line quasar FIRST J155633.8+351758, ''the first radio loud BALQSO''. Our observations at 15.3 GHz partially resolved a secondary component at position angle (P.A.) ≈35°. We combine this determination of the radio jet projection on the sky plane, with the constraint that the jet is viewed within 14.°3 of the line of sight (as implied by the high variability brightness temperature) and with the P.A. of the optical/UV continuum polarization in order to study the quasar geometry. Within the context of the standard model, the data indicates a ''dusty torus'' (scattering surface) with a symmetry axis tilted relative to the accretion disk normal and a polar broad absorption line outflow aligned with the accretion disk normal. We compare this geometry to that indicated by the higher resolution radio data, brightness temperature, and optical/UV continuum polarization P.A. of a similar high optical polarization BALQSO, Mrk 231. A qualitatively similar geometry is found in these two polar BALQSOs; the continuum polarization is determined primarily by the tilt of the dusty torus

  2. Accurate Theoretical Methane Line Lists in the Infrared up to 3000 K and Quasi-continuum Absorption/Emission Modeling for Astrophysical Applications

    Science.gov (United States)

    Rey, Michael; Nikitin, Andrei V.; Tyuterev, Vladimir G.

    2017-10-01

    Modeling atmospheres of hot exoplanets and brown dwarfs requires high-T databases that include methane as the major hydrocarbon. We report a complete theoretical line list of 12CH4 in the infrared range 0-13,400 cm-1 up to T max = 3000 K computed via a full quantum-mechanical method from ab initio potential energy and dipole moment surfaces. Over 150 billion transitions were generated with the lower rovibrational energy cutoff 33,000 cm-1 and intensity cutoff down to 10-33 cm/molecule to ensure convergent opacity predictions. Empirical corrections for 3.7 million of the strongest transitions permitted line position accuracies of 0.001-0.01 cm-1. Full data are partitioned into two sets. “Light lists” contain strong and medium transitions necessary for an accurate description of sharp features in absorption/emission spectra. For a fast and efficient modeling of quasi-continuum cross sections, billions of tiny lines are compressed in “super-line” libraries according to Rey et al. These combined data will be freely accessible via the TheoReTS information system (http://theorets.univ-reims.fr, http://theorets.tsu.ru), which provides a user-friendly interface for simulations of absorption coefficients, cross-sectional transmittance, and radiance. Comparisons with cold, room, and high-T experimental data show that the data reported here represent the first global theoretical methane lists suitable for high-resolution astrophysical applications.

  3. Changes in protein expression profiles between a low phytic acid rice ( Oryza sativa L. Ssp. japonica) line and its parental line: a proteomic and bioinformatic approach.

    Science.gov (United States)

    Emami, Kaveh; Morris, Nicholas J; Cockell, Simon J; Golebiowska, Gabriela; Shu, Qing-Yao; Gatehouse, Angharad M R

    2010-06-09

    The seed proteome of a low phytic acid (lpa) rice line (Os-lpa-XS110-1), developed as a novel food source, was compared to that of its parental line, Xiushui 110 (XS-110). Analysis by surfaced enhanced laser desorption ionization-time-of-flight mass spectrometry (SELDI-TOF MS) and two-dimensional gel electrophoresis (2-DE) allowed the detection of a potential low molecular weight biomarker and identification of 23 differentially expressed proteins that include stress-related proteins, storage proteins, and potential allergens. Bioinformatic analyses revealed that triose phosphate isomerase (TPI) and fructose bisphosphatealdolase (FBA), two major differentially expressed proteins, are involved in myo-inositol metabolism. Accumulation of globulin was also significantly decreased in the lpa line. This study demonstrates the potential of proteomic and bioinformatic profiling techniques for safety assessment of novel foods. Furthermore, these techniques provide powerful tools for studying functional genomics due to the possibility of identifying genes related to the mutated traits.

  4. New developments in velocity profile measurement and pipe wall wear monitoring for hydrotransport lines

    Energy Technology Data Exchange (ETDEWEB)

    O' Keefe, C.; Maron, R.J. [CiDRA Minerals Processing Inc., Wallingford, CT (United States); Fernald, M.; Bailey, T. [CiDRA Corporate Services, Wallingford, CT (United States); Van der Spek, A. [ZDOOR, Rotterdam (Netherlands)

    2009-07-01

    Sonar array flow measurement technology was initially developed a decade ago with the goal of non-invasively measuring multi-phase flows in the petroleum industry. The same technology was later adapted to the mineral processing industry where it has been rapidly adopted. The specific sensor technology, based on piezoelectric film sensors, provides unique measurement capabilities, including the ability to non-invasively measure localized strains in the walls of pipes. Combined with sonar array processing algorithms, an axial array of such sensors can measure flow velocities within a pipe. The sensors are useful for monitoring and managing slurry flow in horizontal pipes since they provide real-time velocity profiles measurement. The information is useful in determining the approach and onset of solid deposition on the bottom of the pipe. The sensors also provide a non-invasive measurement of pipe wear on slurry lines. Such measurements are currently made by hand-held portable ultrasonic thickness gages. The shortfalls associated with this manual method are overcome with a set of permanently or semi-permanently installed transducers clamped onto the outside of the pipe, where sensors measure the thickness of the pipe. This system and approach results in better repeatability and accuracy compared to manual methods. It also decreases inspection labor costs and pipe access requirements. It was concluded that the potential impact on personnel safety and environmental savings will be significant. 3 refs., 20 figs.

  5. Face-to-Face vs On-Line: An Analysis of Profile, Learning, Performance and Satisfaction among Post Graduate Students

    Science.gov (United States)

    Ortega-Maldonado, Alberto; Llorens, Susana; Acosta, Hedy; Coo, Cristián

    2017-01-01

    The aim of this study is to explore the differences between face-to-face and on-line students in a post graduate education program. The variables considered are Post Graduate Student's profile, competences and learning outcomes, academic performance and satisfaction. The sample was composed by 47 students (64% face-to-face). Analysis of variance…

  6. Theoretical Emission-Line Profiles of Active Galactic Nuclei and the Unified Model. I. The Face-on Torus

    Science.gov (United States)

    Quintilio, R.; Viegas, S. M.

    1997-01-01

    Theoretical emission-line profiles are obtained for active galactic nuclei (AGNs) taking into account the presence of an obscuring torus around the central energy source. For the sake of simplicity, the torus is represented by a cylindrical shell characterized by the inner and outer radius and the opening angle. In this paper we discuss the results with angle of sight equal to 0, i.e., for a face-on torus. Different line profiles are obtained following the torus parameters. The line profiles may show more than one peak and bumps, depending on the torus dimensions. The main parameter determining the number of peaks or bumps is the opening angle. Thus, the observed line shape may be a good indicator of the torus characteristics. As an example, the fit to the observed [O III] λ5007 emission line of NGC 4151 is presented. The model reproduces the FWHM and the asymmetrical bumps observed. Partially supported by the Fundação de Amparo à Pesquisa do Estado de São Paulo (FAPESP) under Grant 92/4335-9.

  7. Cell Line Derived 5-FU and Irinotecan Drug-Sensitivity Profiles Evaluated in Adjuvant Colon Cancer Trial Data

    DEFF Research Database (Denmark)

    Buhl, Ida Kappel; Gerster, Sarah; Delorenzi, Mauro

    2016-01-01

    PURPOSE: This study evaluates whether gene signatures for chemosensitivity for irinotecan and 5-fluorouracil (5-FU) derived from in vitro grown cancer cell lines can predict clinical sensitivity to these drugs. METHODS: To test if an irinotecan signature and a SN-38 signature could identify...... patients who benefitted from the addition of irinotecan to 5-FU, we used gene expression profiles based on cell lines and clinical tumor material. These profiles were applied to expression data obtained from pretreatment formalin fixed paraffin embedded (FFPE) tumor tissue from 636 stage III colon cancer...... patients enrolled in the PETACC-3 prospective randomized clinical trial. A 5-FU profile developed similarly was assessed by comparing the PETACC-3 cohort with a cohort of 359 stage II colon cancer patients who underwent surgery but received no adjuvant therapy. RESULTS: There was no statistically...

  8. Two-photon-absorption line strengths for nitric oxide: Comparison of theory and sub-Doppler, laser-induced fluorescence measurements

    Science.gov (United States)

    Kulatilaka, Waruna D.; Lucht, Robert P.

    2017-03-01

    We discuss the results of high-resolution, sub-Doppler two-photon-absorption laser-induced fluorescence (TPALIF) spectroscopy of nitric oxide at low pressure and room temperature. The measurements were performed using the single-longitudinal mode output of a diode-laser-seeded optical parametric generator (OPG) system with a measured frequency bandwidth of 220 MHz. The measurements were performed using a counter-propagating pump beam geometry, resulting in sub-Doppler TPALIF spectra of NO for various rotational transitions in the (0,0) vibrational band of the A2Σ+ - X2Π electronic transition. The experimental results are compared with the results of a perturbative treatment of the rotational line strengths for the 20 different rotational branches of the X2Π(v″ = 0) → A2Σ+(v' = 0) two-photon absorption band. In the derivation of the expressions for the two-photon transition absorption strength, the closure relation is used for rotational states in the intermediate levels of the two-photon transition in analogy with the Placzek treatment of Raman transitions. The theoretical treatment of the effect of angular momentum coupling on the two-photon rotational line strengths features the use of irreducible spherical tensors and 3j symbols. The final results are expressed in terms of the Hund's case (a) coupling coefficients aJ and bJ for the X2Π(v″ = 0) rotational level wavefunctions, which are intermediate between Hund's case (a) and case (b). Considerable physical insight is provided by this final form of the equations for the rotational line strengths. Corrections to the two-photon absorption rotational line strength for higher order effects such as centrifugal stretching can be included in a straightforward fashion in the analysis by incorporating higher order terms in these coupling coefficients aJ and bJ, although these corrections are essentially negligible for J satellite transitions are in excellent agreement with our experimental measurements.

  9. Studies of the $\\beta$-decay of Sr nuclei on and near the N=Z Line with a Total Absorption Gamma-ray Spectrometer

    CERN Multimedia

    Marechal, F; Caballero ontanaya, L

    2002-01-01

    In the framework of the investigation of the shapes of the ground states of the parent nucleus, we propose to carry out measurements of the complete Gamow-Teller strength distribution for the $^{76-80}$Sr isotopes, with a new Total Absorption Gamma Spectrometer installed on a new beam line. The results will be compared with theoretical calculations based on the mean field approach. A brief report on the IS370 experiment on $^{72-75}$Kr decay, which was recently performed at ISOLDE, will be given and the performance of the sum spectrometer will be presented.

  10. Solar Flare Termination Shock and Synthetic Emission Line Profiles of the Fe xxi 1354.08 Å Line

    Energy Technology Data Exchange (ETDEWEB)

    Guo, Lijia [Lockheed Martin Solar and Astrophysics Laboratory, Palo Alto, CA (United States); Li, Gang [Department of Space Science and CSPAR, University of Alabama in Huntsville, Huntsville, AL (United States); Reeves, Kathy; Raymond, John, E-mail: gang.li@uah.edu [Harvard-Smithsonian Center for Astrophysics, Boston, MA (United States)

    2017-09-01

    Solar flares are among the most energetic phenomena that occur in the solar system. In the standard solar flare model, a fast mode shock, often referred to as the flare termination shock (TS), can exist above the loop-top source of hard X-ray emissions. The existence of the TS has been recently related to spectral hardening of a flare’s hard X-ray spectra at energies >300 keV. Observations of the Fe xxi 1354.08 Å line during solar flares by the Interface Region Imaging Spectrograph ( IRIS ) spacecraft have found significant redshifts with >100 km s{sup −1}, which is consistent with a reconnection downflow. The ability to detect such a redshift with IRIS suggests that one may be able to use IRIS observations to identify flare TSs. Using a magnetohydrodynamic simulation to model magnetic reconnection of a solar flare and assuming the existence of a TS in the downflow of the reconnection plasma, we model the synthetic emission of the Fe xxi 1354.08 line in this work. We show that the existence of the TS in the solar flare may manifest itself in the Fe xxi 1354.08 Å line.

  11. Development of an automated sequential injection on-line solvent extraction-back extraction procedure as demonstrated for the determination of cadmium with detection by electrothermal atomic absorption spectrometry

    DEFF Research Database (Denmark)

    Wang, Jianhua; Hansen, Elo Harald

    2002-01-01

    An automated sequential injection (SI) on-line solvent extraction-back extraction separation/preconcentration procedure is described. Demonstrated for the assay of cadmium by electrothermal atomic absorption spectrometry (ETAAS), the analyte is initially complexed with ammonium pyrrolidinedithioc......An automated sequential injection (SI) on-line solvent extraction-back extraction separation/preconcentration procedure is described. Demonstrated for the assay of cadmium by electrothermal atomic absorption spectrometry (ETAAS), the analyte is initially complexed with ammonium...

  12. Comparative Analysis of Genome Wide DNA Methylation Profiles for the Genic Male Sterile Cabbage Line 01-20S and Its Maintainer Line

    Science.gov (United States)

    Han, Fengqing; Zhang, Xiaoli; Liu, Xing; Su, Henan; Kong, Congcong; Fang, Zhiyuan; Yang, Limei; Zhuang, Mu; Zhang, Yangyong; Liu, Yumei; Li, Zhansheng; Lv, Honghao

    2017-01-01

    Methylation modifications play an important role in multiple biological processes. Several studies have reported altered methylation patterns in male sterile plants such as rice and wheat, but little is known about the global methylation profiles and their possible roles in the cabbage (Brassica oleracea) male sterile line. In this study, single-base-resolution bisulfite sequencing (BS-Seq) was adopted to identify the pattern and degree of cytosine methylation in the male sterile line 01-20S and its near-isogenic fertile line 01-20F. Similar methylation patterns were profiled, with some changes observed in local positions. In total, 505 differentially methylated genomic regions (DMRs) and 106 DMR-associated genes were detected. Nine genes related to pollen development were discovered and further validated by a quantitative reverse-transcription polymerase chain reaction (qRT-PCR). Among these, four were downregulated in 01-20S. In particular, Bol039180 (an invertase/pectin methylesterase inhibitor family protein) is likely involved in pectin degradation, and might play an important role in the pollen separation defects of 01-20S. This study facilitates a better understanding of DNA methylation alterations and their possible roles in genic male sterility in cabbages. PMID:28621722

  13. Study on the microstructure of recycled zircaloy by X-ray diffraction line profile analysis

    International Nuclear Information System (INIS)

    Ichikawa, Rodrigo U.; Pereira, Luiz A.T.; Imakuma, Kengo; Martinez, Luis G.; Turrillas, Xavier

    2013-01-01

    In the fabrication of nuclear fuel elements parts, Zircaloy machining chips are generated and, as this material is high-valued and controlled, its recycling presents high interest not only in economic aspects but also for environmental reasons and due to its strategic role in nuclear technology. Two processes for the recovery of these Zircaloy chips are being studied at IPEN-CNEN/SP. One of the processes is by conventional remelting of the material in a VAR (Vacuum Arc Remelting) furnace for producing solid ingots. Concurrently it is being studied an alternative process, by powder metallurgy methods, by which the chips are hydrided in order to become brittle and be grinded. The resulting ground powder is then compacted and finally vacuum-dehydrided and sintered in one step to form solid pieces. The VAR-remelted samples were also submitted to heat treatments in order to refine their microstructures, resulting in three different samples named 'as cast', 'annealed' and 'tempered'. The microstructures resulting from both processes and also from heat treatments were studied by metallography and X-ray diffraction (XRD). In this work, results of a XRD study are presented applying X-ray diffraction Line Profile Analysis (XLPA) methods in order to determine the mean crystallite sizes and the RMS microstrains on these samples. Additionally, a study for verify the influence of different standard materials used for the correction of the instrumental breadth in the XLPA was developed. The XLPA results show the influence of the processes and also of heat treatments on mean crystallite sizes and microstrains of the samples and were compared to their metallographic study and hardness. (author)

  14. Comparisons between direct and inverse approaches in problems of recovering the true profile of a spectral line

    CERN Document Server

    Mijovic, S

    2003-01-01

    Computer-supported techniques are introduced in the evaluation of experimental data and obtaining the real profile of spectral lines. The direct and inverse approaches were used. The MINUIT program from the packets of CERN's library was used to solve direct problems. Tikhonov's regularization method was also applied to solve the same problems in an inverse manner. Model functions were introduced to check the applicability limitation of these methods and make a comparison between them as well. The advantages and disadvantages of these approaches were shown. The procedures were applied to the measured profiles of He II's spectral lines in a pulsed low-pressure arc. The chosen lines are He II Paschen-alpha (468.6 nm) in the visible region and Balmer-beta (121.5 nm) in the VUV spectral region. The range of experimental errors was determined where both approaches have given reliable results. It was found that we can obtain the real profile of He II 468.6 nm and He II 121.5 nm spectral lines, using the regularizati...

  15. Determination of Ultra-Trace Amounts of Selenium(IV) by Flow Injection Hydride Generation Atomic Absorption Spectrometry with On-line Preconcentration by Co-precipitation with Lanthanium Hydroxide. Part II. On-line Addition of Coprecipating Agent

    DEFF Research Database (Denmark)

    Nielsen, Steffen; Sloth, Jens Jørgen; Hansen, Elo Harald

    1996-01-01

    A flow injection procedure for the determination of ultra-trace amounts of selenium(IV) is described, which combines hydride generation atomic absorption spectrometry (HGAAS) with on-line preconcentration of the analyte by co-precipitation-dissolution in a filterless knotted Microline reactor...... with hydrochloric acid, allowing an ensuing determination via hydride generation. At different sample flow rates, i.e., 4.8, 6.4 and 8.8 ml/min, enrichment factors of 30, 40 and 46, respectively, were obtained at a sampling frequency of 33 samples/h. The detection limit (3s) was 0.005 µg/l at a sample flow rate...

  16. On-line dynamic two-dimensional admicelles solvent extraction coupled to electrothermal atomic absorption spectrometry for determination of chromium(VI) in drinking water

    International Nuclear Information System (INIS)

    Nan Jing; Yan Xiuping

    2005-01-01

    An on-line dynamic two-dimensional admicelles solvent extraction system was coupled to electrothermal atomic absorption spectrometry (ETAAS) for determination of Cr(VI) in drinking water. As a two-dimensional solvent, admicelles were on-line-prepared by passing cetyltrimethylammonium bromide (CTAB) through a microcolumn packed with silica gel. The analyte Cr(VI) was on-line-complexed with pyrrolidine dithiocarbamate (PDC), and the resulting Cr(VI)-PDC was effectively adsolubilized in the admicelles of the microcolumn, and then quantitatively eluted with 30 μl of acetonitrile for ETAAS determination. All the procedures including the formation and decomposition of admicelles and ETAAS determination were performed on-line, ensuring automatic determination of Cr(VI) in drinking water with a high precision. With a consumption of 2.1 ml sample solution, a detection limit (3σ) of 3.0 ng l -1 , and an enhancement factor of 32 were obtained at a sample throughput of 31 samples h -1 . The precision (R.S.D.) for 11 replicate measurements of 50 ng l -1 Cr(VI) was 2.5%. The developed methodology was demonstrated to be reliable and sensitive for automatic determination of ultratrace Cr(VI) in bottled drinking water samples

  17. LINES

    Directory of Open Access Journals (Sweden)

    Minas Bakalchev

    2015-10-01

    Full Text Available The perception of elements in a system often creates their interdependence, interconditionality, and suppression. The lines from a basic geometrical element have become the model of a reductive world based on isolation according to certain criteria such as function, structure, and social organization. Their traces are experienced in the contemporary world as fragments or ruins of a system of domination of an assumed hierarchical unity. How can one release oneself from such dependence or determinism? How can the lines become less “systematic” and forms more autonomous, and less reductive? How is a form released from modernistic determinism on the new controversial ground? How can these elements or forms of representation become forms of action in the present complex world? In this paper, the meaning of lines through the ideas of Le Corbusier, Leonidov, Picasso, and Hitchcock is presented. Spatial research was made through a series of examples arising from the projects of the architectural studio “Residential Transformations”, which was a backbone for mapping the possibilities ranging from playfulness to exactness, as tactics of transformation in the different contexts of the contemporary world.

  18. Barriers to internal rotation from relative intensity measurements as a function of temperature on microwave absorption lines

    NARCIS (Netherlands)

    Ruitenberg, G.

    A variant is presented of the relative intensity method (RIM) in microwave spectroscopy to determine barriers to internal rotation. In this method torsional energies are determined directly from the slope of the straight line relating the logarithm of the intensity ratio and the reciprocal of the

  19. ATOMIC DATA FOR ABSORPTION-LINES FROM THE GROUND-LEVEL AT WAVELENGTHS GREATER-THAN-228-ANGSTROM

    NARCIS (Netherlands)

    VERNER, DA; BARTHEL, PD; TYTLER, D

    1994-01-01

    We list wavelengths, statistical weigths and oscillator strengths for 2249 spectral lines arising from the ground states of atoms and ions. The compilation covers all wavelengths longward of the HeII Lyman limit at 227.838 Angstrom and all the ion states of all elements from hydrogen to bismuth (Z =

  20. Assessment of cadmium and iron adsorption in sediment, employing a flow injection analysis system with on line filtration and detection by flame atomic absorption spectrometry and thermospray flame furnace atomic absorption spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Oliveira, Fagner Moreira de; Marchioni, Camila; Barros, Juan A. V de A. [Universidade Federal de Alfenas (UNIFAL-MG), Instituto de Química, Rua GabrielMonteiro da Silva, 714, CEP 37130-000, Alfenas-MG (Brazil); Lago, Ayla Campos do [Universidade Federal de São Carlos (UFSCar-SP), Departamento de Química, 10Rodovia Washington Luís, Km 235-SP 310, CEP 16565-905, São Carlos-SP (Brazil); Wisniewski, Célio [Universidade Federal de Alfenas (UNIFAL-MG), Instituto de Química, Rua GabrielMonteiro da Silva, 714, CEP 37130-000, Alfenas-MG (Brazil); Luccas, Pedro Orival, E-mail: pedro.luccas@unifal-mg.edu.br [Universidade Federal de Alfenas (UNIFAL-MG), Instituto de Química, Rua GabrielMonteiro da Silva, 714, CEP 37130-000, Alfenas-MG (Brazil)

    2014-01-27

    Graphical abstract: -- Highlights: •A FIA system with on-line filtration for isotherms adsorption studies was proposed. •Isotherms for iron and cadmium elements in bottom lake sediment were done. •Inferences about adsorption/desorption mechanisms were feasible. •The proposed method turns the isotherm studies fast and reliable. -- Abstract: This work presents an evaluation of iron and cadmium adsorption in sediment of the Furnas Hydroelectric Plant Reservatory located in Alfenas, Minas Gerais (Brazil). The metal determination was done employing a flow injection analysis (FIA) with an on-line filtering system. As detection techniques, flame atomic absorption spectrometry (FAAS) for iron and thermospray flame furnace atomic absorption spectrometry (TS-FF-AAS) for cadmium determinations were used. The developed methodology presented good limits of detection, being 190 μg L{sup −1} for iron and 1.36 μg L{sup −1} for cadmium, and high sampling frequency for both metals 144 and 60 readings h{sup −1} for iron and cadmium, respectively. Both metals obey the Langmuir model, with maximum adsorptive capacity of 0⋅169 mg g{sup −1} for iron and 7⋅991 mg g{sup −1} for cadmium. For iron, a pseudo-first-order kinetic model was obtained with a theoretical Q{sub e} = 9⋅8355 mg g{sup −1} (experimental Q{sub e} = 9⋅5432 mg g{sup −1}), while for cadmium, a pseudo-second-order kinetic model was obtained, with a theoretical Q{sub e} = 0.3123 mg g{sup −1} (experimental Q{sub e} = 0⋅3052 mg g{sup −1})

  1. Achieving an Accurate Surface Profile of a Photonic Crystal for Near-Unity Solar Absorption in a Super Thin-Film Architecture.

    Science.gov (United States)

    Kuang, Ping; Eyderman, Sergey; Hsieh, Mei-Li; Post, Anthony; John, Sajeev; Lin, Shawn-Yu

    2016-06-28

    In this work, a teepee-like photonic crystal (PC) structure on crystalline silicon (c-Si) is experimentally demonstrated, which fulfills two critical criteria in solar energy harvesting by (i) its Gaussian-type gradient-index profile for excellent antireflection and (ii) near-orthogonal energy flow and vortex-like field concentration via the parallel-to-interface refraction effect inside the structure for enhanced light trapping. For the PC structure on 500-μm-thick c-Si, the average reflection is only ∼0.7% for λ = 400-1000 nm. For the same structure on a much thinner c-Si ( t = 10 μm), the absorption is near unity (A ∼ 99%) for visible wavelengths, while the absorption in the weakly absorbing range (λ ∼ 1000 nm) is significantly increased to 79%, comparing to only 6% absorption for a 10-μm-thick planar c-Si. In addition, the average absorption (∼94.7%) of the PC structure on 10 μm c-Si for λ = 400-1000 nm is only ∼3.8% less than the average absorption (∼98.5%) of the PC structure on 500 μm c-Si, while the equivalent silicon solid content is reduced by 50 times. Furthermore, the angular dependence measurements show that the high absorption is sustained over a wide angle range (θinc = 0-60°) for teepee-like PC structure on both 500 and 10-μm-thick c-Si.

  2. A multi-epoch spectroscopic study of the BAL quasar APM 08279+5255. II. Emission- and absorption-line variability time lags

    Science.gov (United States)

    Saturni, F. G.; Trevese, D.; Vagnetti, F.; Perna, M.; Dadina, M.

    2016-03-01

    Context. The study of high-redshift bright quasars is crucial to gather information about the history of galaxy assembly and evolution. Variability analyses can provide useful data on the physics of quasar processes and their relation with the host galaxy. Aims: In this study, we aim to measure the black hole mass of the bright lensed BAL QSO APM 08279+5255 at z = 3.911 through reverberation mapping, and to update and extend the monitoring of its C IV absorption line variability. Methods: We perform the first reverberation mapping of the Si IV and C IV emission lines for a high-luminosity quasar at high redshift with the use of 138 R-band photometric data and 30 spectra available over 16 years of observations. We also cross-correlate the C IV absorption equivalent width variations with the continuum light curve to estimate the recombination time lags of the various absorbers and infer the physical conditions of the ionised gas. Results: We find a reverberation-mapping time lag of ~900 rest-frame days for both Si IV and C IV emission lines. This is consistent with an extension of the BLR size-to-luminosity relation for active galactic nuclei up to a luminosity of ~1048 erg s-1, and implies a black hole mass of 1010 M⊙. Additionally, we measure a recombination time lag of ~160 days in the rest frame for the C IV narrow absorption system, which implies an electron density of the absorbing gas of ~2.5 × 104 cm-3. Conclusions: The measured black hole mass of APM 08279+5255 indicates that the quasar resides in an under-massive host-galaxy bulge with Mbulge ~ 7.5MBH, and that the lens magnification is lower than ~8. Finally, the inferred electron density of the narrow-line absorber implies a distance of the order of 10 kpc of the absorbing gas from the quasar, placing it within the host galaxy.

  3. Accurate Theoretical Methane Line Lists in the Infrared up to 3000 K and Quasi-continuum Absorption/Emission Modeling for Astrophysical Applications

    Energy Technology Data Exchange (ETDEWEB)

    Rey, Michael; Tyuterev, Vladimir G. [Groupe de Spectrométrie Moléculaire et Atmosphérique, UMR CNRS 7331, BP 1039, F-51687, Reims Cedex 2 (France); Nikitin, Andrei V., E-mail: michael.rey@univ-reims.fr [Laboratory of Theoretical Spectroscopy, Institute of Atmospheric Optics, SB RAS, 634055 Tomsk (Russian Federation)

    2017-10-01

    Modeling atmospheres of hot exoplanets and brown dwarfs requires high- T databases that include methane as the major hydrocarbon. We report a complete theoretical line list of {sup 12}CH{sub 4} in the infrared range 0–13,400 cm{sup −1} up to T {sub max} = 3000 K computed via a full quantum-mechanical method from ab initio potential energy and dipole moment surfaces. Over 150 billion transitions were generated with the lower rovibrational energy cutoff 33,000 cm{sup −1} and intensity cutoff down to 10{sup −33} cm/molecule to ensure convergent opacity predictions. Empirical corrections for 3.7 million of the strongest transitions permitted line position accuracies of 0.001–0.01 cm{sup −1}. Full data are partitioned into two sets. “Light lists” contain strong and medium transitions necessary for an accurate description of sharp features in absorption/emission spectra. For a fast and efficient modeling of quasi-continuum cross sections, billions of tiny lines are compressed in “super-line” libraries according to Rey et al. These combined data will be freely accessible via the TheoReTS information system (http://theorets.univ-reims.fr, http://theorets.tsu.ru), which provides a user-friendly interface for simulations of absorption coefficients, cross-sectional transmittance, and radiance. Comparisons with cold, room, and high- T experimental data show that the data reported here represent the first global theoretical methane lists suitable for high-resolution astrophysical applications.

  4. Magnitude Differences in Bioactive Compounds, Chemical Functional Groups, Fatty Acid Profiles, Nutrient Degradation and Digestion, Molecular Structure, and Metabolic Characteristics of Protein in Newly Developed Yellow-Seeded and Black-Seeded Canola Lines.

    Science.gov (United States)

    Theodoridou, Katerina; Zhang, Xuewei; Vail, Sally; Yu, Peiqiang

    2015-06-10

    Recently, new lines of yellow-seeded (CS-Y) and black-seeded canola (CS-B) have been developed with chemical and structural alteration through modern breeding technology. However, no systematic study was found on the bioactive compounds, chemical functional groups, fatty acid profiles, inherent structure, nutrient degradation and absorption, or metabolic characteristics between the newly developed yellow- and black-seeded canola lines. This study aimed to systematically characterize chemical, structural, and nutritional features in these canola lines. The parameters accessed include bioactive compounds and antinutrition factors, chemical functional groups, detailed chemical and nutrient profiles, energy value, nutrient fractions, protein structure, degradation kinetics, intestinal digestion, true intestinal protein supply, and feed milk value. The results showed that the CS-Y line was lower (P ≤ 0.05) in neutral detergent fiber (122 vs 154 g/kg DM), acid detergent fiber (61 vs 99 g/kg DM), lignin (58 vs 77 g/kg DM), nonprotein nitrogen (56 vs 68 g/kg DM), and acid detergent insoluble protein (11 vs 35 g/kg DM) than the CS-B line. There was no difference in fatty acid profiles except C20:1 eicosenoic acid content (omega-9) which was in lower in the CS-Y line (P makeup and conformation between the two lines. In terms of energy values, there were significant differences in total digestible nutrient (TDN; 149 vs 133 g/kg DM), metabolizable energy (ME; 58 vs 52 MJ/kg DM), and net energy for lactation (NEL; 42 vs 37 MJ/kg DM) between CS-Y and CS-B lines. For in situ rumen degradation kinetics, the two lines differed in soluble fraction (S; 284 vs 341 g/kg CP), potential degradation fraction (D; 672 vs 590 g/kg CP), and effective degraded organic matter (EDOM; 710 vs 684 g/kg OM), but no difference in degradation rate. CS-Y had higher digestibility of rumen bypass protein in the intestine than CS-B (566 vs 446 g/kg of RUP, P < 0.05). Modeling nutrient supply results

  5. Simultaneous measure of a spectral line profile and the apparatus function of a Fabry-Perot spectrometer when continuous background is present

    International Nuclear Information System (INIS)

    Moreno, J.M.; Quintanilla, M.; Mar, S.

    1978-01-01

    A deconvolution method of registered profile on a Fabry-Perot spectrometer is developed, when the actual profile of the source is a Voigt pattern together with a continuous background. The reliability and accuracy of the method is tested with theoreticaly simulated profiles. The method is applied both to measure the real line profiles and to find the Fabry-Perot parameters, as a test of its validity on studies of experimental profiles. Both measure types -source profile and apparatus function- are made simultaneously by means of analysis of the variations of registered profile, at 6438.5A Cd line and 6328A He-Ne laser line, varying the optical path between interferometer mirrors. (author) [es

  6. Microstructure of calcite deformed by high-pressure torsion: An X-ray line profile study

    Science.gov (United States)

    Schuster, Roman; Schafler, Erhard; Schell, Norbert; Kunz, Martin; Abart, Rainer

    2017-11-01

    Calcite aggregates were deformed to high strain using high-pressure torsion and applying confining pressures of 1-6 GPa and temperatures between room temperature and 450 °C. The run products were characterized by X-ray diffraction, and key microstructural parameters were extracted employing X-ray line profile analysis. The dominant slip system was determined as r { 10 1 bar 4 } ⟨ 2 bar 021 ⟩ with edge dislocation character. The resulting dislocation density and the size of the coherently scattering domains (CSD) exhibit a systematic dependence on the P-T conditions of deformation. While high pressure generally impedes recovery through reducing point defect mobility, the picture is complicated by pressure-induced phase transformations in the CaCO3 system. Transition from the calcite stability field to those of the high-pressure polymorphs CaCO3-II, CaCO3-III and CaCO3-IIIb leads to a change of the microstructural evolution with deformation. At 450 °C and pressures within the calcite stability field, dislocation densities and CSD sizes saturate at shear strains exceeding 10 in agreement with earlier studies at lower pressures. In the stability field of CaCO3-II, the dislocation density exhibits a more complex behavior. Furthermore, at a given strain and strain rate, the dislocation density increases and the CSD size decreases with increasing pressure within the stability fields of either calcite or of the high-pressure polymorphs. There is, however, a jump from high dislocation densities and small CSDs in the upper pressure region of the calcite stability field to lower dislocation densities and larger CSDs in the low-pressure region of the CaCO3-II stability field. This jump is more pronounced at higher temperatures and less so at room temperature. The pressure influence on the deformation-induced evolution of dislocation densities implies that pressure variations may change the rheology of carbonate rocks. In particular, a weakening is expected to occur at

  7. Non-Maxwellian Analysis of the Transition-region Line Profiles Observed by the Interface Region Imaging Spectrograph

    Czech Academy of Sciences Publication Activity Database

    Dudík, Jaroslav; Polito, V.; Dzifčáková, Elena; Del Zanna, G.; Testa, P.

    2017-01-01

    Roč. 842, č. 1 (2017), 1/1-1/18 ISSN 0004-637X R&D Projects: GA ČR(CZ) GA16-18495S; GA ČR(CZ) GA17-16447S Institutional support: RVO:67985815 Keywords : line profiles * data analysis * radiation mechanisms Subject RIV: BN - Astronomy, Celestial Mechanics, Astrophysics OBOR OECD: Astronomy (including astrophysics,space science) Impact factor: 5.533, year: 2016

  8. Assesment of spineless safflower (Carthamus tinctorius, L.) mutant lines for seed oil content and fatty acid profiles

    International Nuclear Information System (INIS)

    Ragab, A.I.; Kassem, M.; Moustafa, H.A.M.

    2008-01-01

    This study was conducted to assess the new spineless mutants that previously induced through gamma radiation and hybridization techniques in the advanced generation for seed oil content and fatty acid profiles The obtained results cleared that oil percentages of all seven safflower mutants were increased than local variety Giza (1) and the new mutant hybrid 2 line (white petals) had the highest increase value of oil percentage (10%) but the mutant line M14 (dark red petals) had the lowest increase value of oil percentage (3.1 %) The mutant line M7 (yellow petals) had the highest value of total saturated fatty acid (40.38%), because it had the highest value of palmitic fatty acid (25.16%), comparing to 10.01% value for local variety Giza (1), followed by mutant line hybrid 2 (white petals) which had (39.88%) because it had the highest value of caprylic, capric, lauric, myristic and stearic fatty acids. All safflower mutant lines had higher value of oleic fatty acid than that of the local variety Giza (1) the two new safflower mutant lines M7 (yellow petals) and hybrid 2 (white petal) had the highest value of oleic fatty acid 41.22% and 39.88% respectively in comparison with 13.5% for local variety Giza (1), the obtained results are indicating to seed oil content negative correlation between oleic and linoleic acids

  9. Gene expression profiling in chemoresistant variants of three cell lines of different origin

    DEFF Research Database (Denmark)

    Johnsson, Anders; Vallon-Christensson, Johan; Strand, Carina

    2005-01-01

    . Several genes encoding ABC transporters were highly up-regulated, most notably ABCB1 (MDR1) and ABCB4 in several cell lines and ABCG2 (MXR) specifically in MX-resistant cell lines. A pronounced down-regulation of several histones was noted in the MCF-7-derived resistant sublines. Altered expression...

  10. Neonatal Cytokine Profile in the Airway Mucosal Lining Fluid Is Skewed by Maternal Atopy

    DEFF Research Database (Denmark)

    Folsgaard, Nilofar V.; Chawes, Bo L.; Rasmussen, Morten A.

    2012-01-01

    on the cytokines and chemokines in the upper airway mucosal lining fluid of healthy neonates. Objectives: To study parental atopic imprinting on the cytokines and chemokines in the upper airway mucosal lining fluid of healthy neonates. Methods: Eighteen cytokines and chemokines were quantified in nasal mucosal...

  11. Time Ordering Effects on Hydrogen Zeeman-Stark Line Profiles in Low-Density Magnetized Plasmas

    Directory of Open Access Journals (Sweden)

    J. Rosato

    2010-01-01

    Full Text Available Stark broadening of hydrogen lines is investigated in low-density magnetized plasmas, at typical conditions of magnetic fusion experiments. The role of time ordering is assessed numerically, by using a simulation code accounting for the evolution of the microscopic electric field generated by the charged particles moving at the vicinity of the atom. The Zeeman effect due to the magnetic field is also retained. Lyman lines with a low principal quantum number n are first investigated, for an application to opacity calculations; next Balmer lines with successively low and high principal quantum numbers are considered for diagnostic purposes. It is shown that neglecting time ordering results in a dramatic underestimation of the Stark effect on the low-n lines. Another conclusion is that time ordering becomes negligible only when ion dynamics effects vanish, as shown in the case of high-n lines.

  12. Beam profile control of line focus for x-ray laser experiment

    Energy Technology Data Exchange (ETDEWEB)

    Yoon, G.Y.; Jitsuno, T.; Nakatsuka, M.; Daido, H.; Kato, Y.; Nakai, S. [Osaka Univ., Suita, Osaka (Japan). Inst. of Laser Engineering

    1995-12-31

    A high aspect ratio line focus on a target for the x-ray laser experiments is required for obtaining a high gain-length product. A new line focus system is developed to generate a uniform line focus. The system consists of a deformable mirror of a continuous faceplate type which provides an appropriate wavefront distribution for compensating an aberration of a line focus optics. The width and intensity distribution of 18.2mm long line focus have been improved on 2 times diffraction limit. As other application, a rectangular beam shaping from a circular defocused beam is investigated by the experiment and the diffraction calculation. The controllability of intensity distribution of laser beam by deformable mirror has been demonstrated.

  13. On-line preconcentration of cobalt in drinking water using a minicolumn packed with activated carbon coupled to electrothermal atomic absorption spectrometric determination

    Energy Technology Data Exchange (ETDEWEB)

    Cerutti, Soledad; Moyano, Susana; Gasquez, Jose A.; Stripeikis, Jorge; Olsina, Roberto A.; Martinez, Luis D. E-mail: ldm@unsl.edu.ar

    2003-11-21

    An on-line flow injection preconcentration-electrothermal atomic absorption spectrometry method is developed for trace determination of cobalt in drinking water samples by sorption on a conical minicolumn packed with activated carbon at pH 9.5. The cobalt was eluted from the minicolumn with 10% (v/v) nitric acid. An enrichment factor of 190-fold for a sample volume of 10 ml was obtained. The detection limit (DL) value for the preconcentration method proposed was 5 ng l{sup -1}. The precision for 10 replicate determinations at the 50 ng l{sup -1} Co level was 4.7% relative standard deviation. The calibration graph using the preconcentration system for cobalt was linear with a correlation coefficient of 0.9993 at levels near the DLs up to at least 0.35 {mu}g l{sup -1}. The method was successfully applied to the determination of cobalt in drinking water samples.

  14. Speciation of four selenium compounds using high performance liquid chromatography with on-line detection by inductively coupled plasma mass spectrometry or flame atomic absorption spectrometry

    DEFF Research Database (Denmark)

    Pedersen, Gitte Alsing; Larsen, Erik Huusfeldt

    1997-01-01

    with an aqueous solution of 6 mmol L-1 of salicylate ion at pH 8.5 as the mobile phase which allowed the isocratic separation of the four selenium analytes within 8 minutes. The separated selenium species were detected on-line by flame atomic absorption spectrometry (FAAS) or inductively coupled plasma mass......An analytical method for the speciation of selenomethionine, selenocystine, selenite and selenate by high performance liquid chromatography (HPLC) with atomic spectrometric detection is presented. An organic polymeric strong anion exchange column was used as the stationary phase in combination...... spectrometry (ICP-MS). The signal-to-noise ratio of the FAAS detector was optimized using a hydrogen-argon entrained-air flame and a slotted-tube atom trap (STAT) in the flame. The limit of detection (3 sigma) achieved by the HPLC-FAAS system was 1 mg L-1 of selenium (100 mu L injections) for each of the four...

  15. Immobilized stearic acid as a new sorbent for on-line preconcentration and determination of lead by flow injection flame atomic absorption spectrometry

    Directory of Open Access Journals (Sweden)

    Dadfarnia Shayessteh

    2006-01-01

    Full Text Available The present study examines the possibility of immobilization of stearic acid on microcrystalline naphthalene for preparation of microcolumn and evaluation of its potential for adsorption and preconcentration of trace amounts of metal ions. It was found that this sorbent has high affinity for lead. Consequently, a rapid on-line preconcentration technique for the determination of lead by Flow Injection Flame Atomic Absorption Spectrometry had been devised. Preconcentration was based on accumulation of analyte on immobilized stearic acid microcolumn and subsequent elution by injection of a small volume of nitric acid (250 µL of 1 mol L-1. A sample volume of 20 mL resulted in a preconcentration factor of 84, and relative standard deviations for solutions containing 40 and 200 µg L-1 were 5.1 and 1.2%, respectively. The procedure was applied to tap water, river water, sea water, apple juice, beet leaf, urine, and certified stainless steel. The accuracy was proved by performing recovery experiments, Graphite Furnace Atomic Absorption Spectrometry measurements, and analysis of a stainless steel certified reference material.

  16. Beam Profile Measurement in MTA Beam Line for High Pressure RF Cavity Beam Test

    International Nuclear Information System (INIS)

    Jana, M.R.; Bross, A.; Chung, M.; Greer, S.; Johnstone, C.; Kobilarcik, T.; Koizumi, G.; Leonova, M.; Moretti, A.; Popovic, M.; Schwartz, T.

    2012-01-01

    Recent High Pressure RF (HPRF) cavity experiment at MuCool Test Area (MTA) has used 400 MeV Linac proton beam to study the beam loading effect. When the energetic proton beam passes through the cavity, it ionizes the inside gas and produces the electrons. These electrons consume RF power inside the cavity. Number of electrons produced per cm inside the cavity (at 950 psi Hydrogen gas) per incident proton is ∼ 1200. The measurement of beam position and profile are necessary. MTA is flammable gas (Hydrogen) hazard zone so we have developed a passive beam diagnostic instrument using Chromox-6 scintillation screen and CCD camera. This paper presents quantitative information about beam position and beam profile. Neutral density filter was used to avoid saturation of CCD camera. Image data is filtered and fitted with Gaussian function to compute the beam size. The beam profile obtained from scintillation screen shall be compared with multi-wire beam profile.

  17. Studying the complex BAL profiles in the BALQSOs spectra

    Energy Technology Data Exchange (ETDEWEB)

    Lyratzi, E; Danezis, E; Popovic, L C; Antoniou, A; Dimitrijevic, M S; Stathopoulos, D, E-mail: elyratzi@phys.uoa.gr

    2010-11-01

    Most of Broad Absorption Lines (BALs) in quasars (QSOs) present very complex profiles. This means that we cannot fit them with a known physical distribution. An idea to explain these profiles is that the dynamical systems of Broad Line Regions (BLRs) are not homogeneous but consist of a number of density regions or ion populations with different physical parameters. Each one of these density regions gives us an independent classical absorption line. If the regions that give rise to such lines rotate with large velocities and move radially with small velocities, the produced lines have large widths and small shifts. As a result they are blended among themselves as well as with the main spectral line and thus they are not discrete. Based on this idea we study the BALs of UV C IV resonance lines in the spectra of a group of Hi ionization Broad Absorption Line Quasars (Hi BALQSOs) using the Gauss-Rotation model (GR model).

  18. The molecular chemistry of diffuse and translucent clouds in the line-of-sight to Sgr B2: Absorption by simple organic and inorganic molecules in the GBT PRIMOS survey

    Science.gov (United States)

    Corby, J. F.; McGuire, B. A.; Herbst, E.; Remijan, A. J.

    2018-02-01

    The 1-50 GHz PRebiotic Interstellar MOlecular Survey (PRIMOS) contains 50 molecular absorption lines observed in clouds located in the line-of-sight to Sgr B2(N). The line-of-sight material is associated with diffuse and translucent clouds located in the Galactic center, bar, and spiral arms in the disk. We measured the column densities and estimate abundances, relative to H2, of 11 molecules and additional isotopologues observed in this material. We used absorption by optically thin transitions of c-C3H2 to estimate the molecular hydrogen columns, and argue that this method is preferable to more commonly used methods. We discuss the kinematic structure and abundance patterns of small molecules including the sulfur-bearing species CS, SO, CCS, H2CS, and HCS+; oxygen-bearing molecules OH, SiO, and H2CO; and simple hydrocarbon molecules c-C3H2, l-C3H, and l-C3H+. Finally, we discuss the implications of the observed chemistry for the structure of the gas and dust in the ISM. Highlighted results include the following. First, whereas gas in the disk has a molecular hydrogen fraction of 0.65, clouds on the outer edge of the Galactic bar and in or near the Galactic center have molecular fractions of 0.85 and >0.9, respectively. Second, we observe trends in isotope ratios with Galactocentric distance; while carbon and silicon show enhancement of the rare isotopes at low Galactocentric distances, sulfur exhibits no trend with Galactocentric distance. We also determine that the ratio of c-C3H2/c-H13CCCH provides a good estimate of the 12C/13C ratio, whereas H2CO/H213CO exhibits fractionation. Third, we report the presence of l-C3H+ in diffuse clouds for the first time. Finally, we suggest that CS has an enhanced abundance within higher density clumps of material in the disk, and therefore may be diagnostic of cloud conditions. If this holds, the diffuse clouds in the Galactic disk contain multiple embedded hyperdensities in a clumpy structure, and the density profile is not

  19. Systematic Blueshift of Line Profiles in the Type IIn Supernova 2010jl: Evidence for Post-shock Dust Formation?

    Science.gov (United States)

    Smith, Nathan; Silverman, Jeffrey M.; Filippenko, Alexei V.; Cooper, Michael C.; Matheson, Thomas; Bian, Fuyan; Weiner, Benjamin J.; Comerford, Julia M.

    2012-01-01

    Type IIn supernovae (SNe) show spectral evidence for strong interaction between their blast wave and dense circumstellar material (CSM) around the progenitor star. SN 2010jl was the brightest core-collapse supernova in 2010, and it was a Type IIn explosion with strong CSM interaction. Andrews et al. recently reported evidence for an infrared (IR) excess in SN 2010jl, indicating either new dust formation or the heating of CSM dust in an IR echo. Here we report multi-epoch spectra of SN 2010jl that reveal the tell-tale signature of new dust formation: emission-line profiles becoming systematically more blueshifted as the red side of the line is blocked by increasing extinction. The effect is seen clearly in the intermediate-width (400-4000 km s-1) component of Hα beginning roughly 30 days after explosion. Moreover, we present near-IR spectra demonstrating that the asymmetry in the hydrogen-line profiles is wavelength dependent, appearing more pronounced at shorter wavelengths. This evidence suggests that new dust grains had formed quickly in the post-shock shell of SN 2010jl arising from CSM interaction. Since the observed dust temperature has been attributed to an IR echo and not to new dust, either (1) IR excess emission at λ sensitive tracer of new dust formation in SNe, or (2) some assumptions about expected dust temperatures might require further study. Lastly, we discuss one possible mechanism other than dust that might lead to increasingly blueshifted line profiles in SNe IIn, although the wavelength dependence of the asymmetry argues against this hypothesis in the case of SN 2010jl.

  20. 24-hour human urine and serum profiles of bisphenol A: Evidence against sublingual absorption following ingestion in soup

    International Nuclear Information System (INIS)

    Teeguarden, Justin G.; Twaddle, Nathan C.; Churchwell, Mona I.; Yang, Xiaoxia; Fisher, Jeffrey W.; Seryak, Liesel M.; Doerge, Daniel R.

    2015-01-01

    Extensive first-pass metabolism of ingested bisphenol A (BPA) in the gastro-intestinal tract and liver restricts blood concentrations of bioactive BPA to < 1% of total BPA in humans and non-human primates. Absorption of ingested BPA through non-metabolizing tissues of the oral cavity, recently demonstrated in dogs, could lead to the higher serum BPA concentrations reported in some human biomonitoring studies. We hypothesized that the extensive interaction with the oral mucosa by a liquid matrix, like soup, relative to solid food or capsules, might enhance absorption through non-metabolizing oral cavity tissues in humans, producing higher bioavailability and higher serum BPA concentrations. Concurrent serum and urine concentrations of d6-BPA, and its glucuronide and sulfate conjugates, were measured over a 24 hour period in 10 adult male volunteers following ingestion of 30 μg d6-BPA/kg body weight in soup. Absorption of d6-BPA was rapid (t 1/2 = 0.45 h) and elimination of the administered dose was complete 24 h post-ingestion, evidence against any tissue depot for BPA. The maximum serum d6-BPA concentration was 0.43 nM at 1.6 h after administration and represented < 0.3% of total d6-BPA. Pharmacokinetic parameters, pharmacokinetic model simulations, and the significantly faster appearance half-life of d6-BPA-glucuronide compared to d6-BPA (0.29 h vs 0.45 h) were evidence against meaningful absorption of BPA in humans through any non-metabolizing tissue (< 1%). This study confirms that typical exposure to BPA in food produces picomolar to subpicomolar serum BPA concentrations in humans, not nM concentrations reported in some biomonitoring studies.

  1. Gene expression profiling in chemoresistant variants of three cell lines of different origin

    DEFF Research Database (Denmark)

    Johnsson, Anders; Vallon-Christensson, Johan; Strand, Carina

    2005-01-01

    lines (K562 leukemia, MCF-7 breast cancer and S1 colon cancer) with acquired resistance against five cytostatic drugs; daunorubicin (DNR), doxorubicin (DOX), vincristine (VCR), etoposide (VP) and mitoxantrone (MX). RESULTS: The resistant cell lines clustered together based on their type of origin...... was also seen in, e.g., GSTs, topoisomerases, caveolins, annexins and CD44. CONCLUSION: These results will constitute a platform for further studies on specific pathways and biological processes involved in chemotherapy resistance....

  2. Vitamin B 12 absorption: correction of intestinal retention by whole-body profile activity of vitamin B 12-58 cobalt and by double tracer technique

    International Nuclear Information System (INIS)

    Goncalves, M.R. Bencke; Gheldof, R.; Paternot, L. van Tricht; Delmotte, E.; Verschaeren, A.; Martin, P.; Verhas, M.; Universidade Federal, Rio de Janeiro, RJ

    1997-01-01

    Full text. Intestinal retention could give false negative results in determining the whole-body retention of vitamin B 12 absorption (WBC B12-58Co). After having validate the WBC B12-58Co, taking the Schilling test as reference, we have studied the feasibility to evaluate the intestinal contamination by measurement of the profile activity distribution of vitamin B12-58Co and by a double tracer technique (WBC B12-58Co/ WBC 51 Cr Cl3). Methodology: twenty five patients were studied for the setting up of the new methodology. For eleven of them the WBC B12-58 Co retention was measured at the 7th day after the oral administration of 37KBq of B12-58Co using a four detectors whole body counter. One week later, a Schilling test was performed after the oral absorption of 18,5 KBq B12-57Co. Results were expressed as %ID. In these patients, one single peak of hepatic activity was observed on the whole body profile and thus no further intestinal correction was needed. In order to evaluate the intestinal contribution, we made in nine other patients the profile of the whole body distribution of activity at 1 h, 1 week and two weeks after the oral administration of B12-58Co. For five other patients a double tracer technique was used for intestinal correction after the simultaneous oral administration of 37 KBq of B12-58Co and 1,85 MBq of 51 Cr Cl3. The B12-58Co absorption was evaluated after intestinal correction based on subtraction of the 51Cr Cl3 contribution after the formula: B12-58Co(%ID) = WBC B12-58Co - WBC 51 Cr Cl3/1 - WBC 51 Cr Cl3. Results: the correlation with the Schilling test was found excellent: r=0,94 (n=11). The normality for WBC retention (n=7) was define as 53,2 +-12,4% ID (SD). For nine patients studied at the 7th day, the presence of a double peak (hepatic and intestinal peaks) allowed the subtraction by exponential extrapolation; the correction range was 4,4% to 37,2%. With the exception of one observation there was no difference in the measure of vitamin

  3. Comparison of the gene expression profile of undifferentiated human embryonic stem cell lines and differentiating embryoid bodies

    Directory of Open Access Journals (Sweden)

    Rao Mahendra S

    2005-10-01

    Full Text Available Abstract Background The identification of molecular pathways of differentiation of embryonic stem cells (hESC is critical for the development of stem cell based medical therapies. In order to identify biomarkers and potential regulators of the process of differentiation, a high quality microarray containing 16,659 seventy base pair oligonucleotides was used to compare gene expression profiles of undifferentiated hESC lines and differentiating embryoid bodies. Results Previously identified "stemness" genes in undifferentiated hESC lines showed down modulation in differentiated cells while expression of several genes was induced as cells differentiated. In addition, a subset of 194 genes showed overexpression of greater than ≥ 3 folds in human embryoid bodies (hEB. These included 37 novel and 157 known genes. Gene expression was validated by a variety of techniques including another large scale array, reverse transcription polymerase chain reaction, focused cDNA microarrays, massively parallel signature sequencing (MPSS analysis and immunocytochemisty. Several novel hEB specific expressed sequence tags (ESTs were mapped to the human genome database and their expression profile characterized. A hierarchical clustering analysis clearly depicted a distinct difference in gene expression profile among undifferentiated and differentiated hESC and confirmed that microarray analysis could readily distinguish them. Conclusion These results present a detailed characterization of a unique set of genes, which can be used to assess the hESC differentiation.

  4. Comparison of the gene expression profile of undifferentiated human embryonic stem cell lines and differentiating embryoid bodies.

    Science.gov (United States)

    Bhattacharya, Bhaskar; Cai, Jingli; Luo, Youngquan; Miura, Takumi; Mejido, Josef; Brimble, Sandii N; Zeng, Xianmin; Schulz, Thomas C; Rao, Mahendra S; Puri, Raj K

    2005-10-05

    The identification of molecular pathways of differentiation of embryonic stem cells (hESC) is critical for the development of stem cell based medical therapies. In order to identify biomarkers and potential regulators of the process of differentiation, a high quality microarray containing 16,659 seventy base pair oligonucleotides was used to compare gene expression profiles of undifferentiated hESC lines and differentiating embryoid bodies. Previously identified "stemness" genes in undifferentiated hESC lines showed down modulation in differentiated cells while expression of several genes was induced as cells differentiated. In addition, a subset of 194 genes showed overexpression of greater than > or = 3 folds in human embryoid bodies (hEB). These included 37 novel and 157 known genes. Gene expression was validated by a variety of techniques including another large scale array, reverse transcription polymerase chain reaction, focused cDNA microarrays, massively parallel signature sequencing (MPSS) analysis and immunocytochemisty. Several novel hEB specific expressed sequence tags (ESTs) were mapped to the human genome database and their expression profile characterized. A hierarchical clustering analysis clearly depicted a distinct difference in gene expression profile among undifferentiated and differentiated hESC and confirmed that microarray analysis could readily distinguish them. These results present a detailed characterization of a unique set of genes, which can be used to assess the hESC differentiation.

  5. Quantitative profiling of housekeeping and Epstein-Barr virus gene transcription in Burkitt lymphoma cell lines using an oligonucleotide microarray

    Directory of Open Access Journals (Sweden)

    Niggli Felix K

    2006-06-01

    Full Text Available Abstract Background The Epstein-Barr virus (EBV is associated with lymphoid malignancies, including Burkitt's lymphoma (BL, and can transform human B cells in vitro. EBV-harboring cell lines are widely used to investigate lymphocyte transformation and oncogenesis. Qualitative EBV gene expression has been extensively described, but knowledge of quantitative transcription is lacking. We hypothesized that transcription levels of EBNA1, the gene essential for EBV persistence within an infected cell, are similar in BL cell lines. Results To compare quantitative gene transcription in the BL cell lines Namalwa, Raji, Akata, Jijoye, and P3HR1, we developed an oligonucleotide microarray chip, including 17 housekeeping genes, six latent EBV genes (EBNA1, EBNA2, EBNA3A, EBNA3C, LMP1, LMP2, and four lytic EBV genes (BZLF1, BXLF2, BKRF2, BZLF2, and used the cell line B95.8 as a reference for EBV gene transcription. Quantitative polymerase chain reaction assays were used to validate microarray results. We found that transcription levels of housekeeping genes differed considerably among BL cell lines. Using a selection of housekeeping genes with similar quantitative transcription in the tested cell lines to normalize EBV gene transcription data, we showed that transcription levels of EBNA1 were quite similar in very different BL cell lines, in contrast to transcription levels of other EBV genes. As demonstrated with Akata cells, the chip allowed us to accurately measure EBV gene transcription changes triggered by treatment interventions. Conclusion Our results suggest uniform EBNA1 transcription levels in BL and that microarray profiling can reveal novel insights on quantitative EBV gene transcription and its impact on lymphocyte biology.

  6. Metabolism and fatty acid profile in fat and lean rainbow trout lines fed with vegetable oil: effect of carbohydrates.

    Directory of Open Access Journals (Sweden)

    Biju Sam Kamalam

    Full Text Available The present study investigated the effect of dietary carbohydrates on metabolism, with special focus on fatty acid bioconversion and flesh lipid composition in two rainbow trout lines divergently selected for muscle lipid content and fed with vegetable oils. These lines were chosen based on previously demonstrated potential differences in LC-PUFA synthesis and carbohydrate utilization. Applying a factorial study design, juvenile trout from the lean (L and the fat (F line were fed vegetable oil based diets with or without gelatinised starch (17.1% for 12 weeks. Blood, liver, muscle, intestine and adipose tissue were sampled after the last meal. Feed intake and growth was higher in the L line than the F line, irrespective of the diet. Moderate postprandial hyperglycemia, strong induction of hepatic glucokinase and repressed glucose-6-phosphatase transcripts confirmed the metabolic response of both lines to carbohydrate intake. Further at the transcriptional level, dietary carbohydrate in the presence of n-3 LC-PUFA deficient vegetable oils enhanced intestinal chylomicron assembly, disturbed hepatic lipid metabolism and importantly elicited a higher response of key desaturase and elongase enzymes in the liver and intestine that endorsed our hypothesis. PPARγ was identified as the factor mediating this dietary regulation of fatty acid bioconversion enzymes in the liver. However, these molecular changes were not sufficient to modify the fatty acid composition of muscle or liver. Concerning the genotype effect, there was no evidence of substantial genotypic difference in lipid metabolism, LC-PUFA synthesis and flesh fatty acid profile when fed with vegetable oils. The minor reduction in plasma glucose and triglyceride levels in the F line was linked to potentially higher glucose and lipid uptake in the muscle. Overall, these data emphasize the importance of dietary macro-nutrient interface in evolving fish nutrition strategies.

  7. Profile reconstruction method adopting parameterized re-projection errors of laser lines generated from bi-cuboid references.

    Science.gov (United States)

    Xu, Guan; Yuan, Jing; Li, Xiaotao; Su, Jian

    2017-11-27

    A flexible reconstruction method, which is based on the line re-projection errors of the laser plane, is presented for the profile recovery. The bi-cuboid references are designed to cover the large view-field of the camera. The local intrinsic and extrinsic parameter matrices of the camera are initially contributed by the RQ decomposition. Then the balance model is demonstrated to obtain the global parameter matrices in view of the refined projection in the camera coordinate system. The flexible laser plane is solved by the Plücker matrices of the projection laser lines that are generated from the homographies of the cubical references and the global parameter matrices. Furthermore, the laser plane and global parameter matrices are improved by the cost function that is constructed by the re-projection errors of the parameterized laser lines on the references. The reconstruction experiments are performed to verify the validity and the accuracy of the optimization method and the initial method. The impact factors of the measurement distance, the reference distance and the test distance are investigated in the experiments. The average reconstruction errors are 1.14 mm, 1.13 mm, 1.15 mm and 1.17 mm in the four groups of experiments, which shows the good application prospect of the profile reconstructions.

  8. Development of on-line single-drop micro-extraction sequential injection system for electrothermal atomic absorption spectrometric determination of trace metals

    International Nuclear Information System (INIS)

    Anthemidis, Aristidis N.; Adam, Ibrahim S.I.

    2009-01-01

    A novel automatic sequential injection (SI) single-drop micro-extraction (SDME) system is proposed as versatile approach for on-line metal preconcentration and/or separation. Coupled to electrothermal atomic absorption spectrometry (ETAAS) the potentials of this SI scheme are demonstrated for trace cadmium determination in water samples. A non-charged complex of cadmium with ammonium diethyldithiophosphate (DDPA) was produced and extracted on-line into a 60 μL micro-drop of di-isobutyl ketone (DIBK). The extraction procedure was performed into a newly designed flow-through extraction cell coupled on a sequential injection manifold. As the complex Cd(II)-DDPA flowed continuously around the micro-droplet, the analyte was extracting into the solvent micro-drop. All the critical parameters were optimized and offered good performance characteristics and high preconcentration ratios. For 600 s micro-extraction time, the enhancement factor was 10 and the sampling frequency was 6 h -1 . The detection limit was 0.01 μg L -1 and the precision (RSD at 0.1 μg L -1 of cadmium) was 3.9%. The proposed method was evaluated by analyzing certified reference material

  9. Evaluation of polychlorotrifluoroethylene as sorbent material for on-line solid phase extraction systems: determination of copper and lead by flame atomic absorption spectrometry in water samples.

    Science.gov (United States)

    Anthemidis, Aristidis N; Ioannou, Kallirroy-Ioanna G

    2006-08-04

    Polychlorotrifluoroethylene (PCTFE) in the form of beads was applied, as packing material for flow injection on-line column preconcentration and separation systems coupled with flame atomic absorption spectrometry (FAAS). Its performance characteristics were evaluated for trace copper determination in environmental samples. The on-line formed complex of metal with diethyldithiophosphate (DDPA) was sorbed on the PCTFE surface. Isobutyl methyl ketone (IBMK) at a flow rate of 2.8 mL min(-1) was used to elute the analyte complex directly into the nebulizer-burner system of spectrophotometer. The proposed sorbent material reveal, excellent chemical and mechanical resistance, fast adsorption kinetics permitting the use of high sample flow rates up to 15 mL min(-1) without loss of retention efficiency. For copper determination, with 90 s preconcentration time the sample frequency was 30 h(-1), the enhancement factor was 250, which could be further improved by increasing the loading (preconcentration) time. The detection limit (3s) was c(L)=0.07 microg L(-1), and the precision (R.S.D.) was 1.8%, at the 2.0 microg L(-1) Cu(II) level. For lead determination, the detection limit was c(L)=2.7 microg L(-1), and the precision (R.S.D.) 2.2%, at the 40.0 microg L(-1) Pb(II) level. The accuracy of the developed method was evaluated by analyzing certified reference materials and by recovery measurements on spiked natural water samples.

  10. An automated flow injection system for metal determination by flame atomic absorption spectrometry involving on-line fabric disk sorptive extraction technique.

    Science.gov (United States)

    Anthemidis, A; Kazantzi, V; Samanidou, V; Kabir, A; Furton, K G

    2016-08-15

    A novel flow injection-fabric disk sorptive extraction (FI-FDSE) system was developed for automated determination of trace metals. The platform was based on a minicolumn packed with sol-gel coated fabric media in the form of disks, incorporated into an on-line solid-phase extraction system, coupled with flame atomic absorption spectrometry (FAAS). This configuration provides minor backpressure, resulting in high loading flow rates and shorter analytical cycles. The potentials of this technique were demonstrated for trace lead and cadmium determination in environmental water samples. The applicability of different sol-gel coated FPSE media was investigated. The on-line formed complex of metal with ammonium pyrrolidine dithiocarbamate (APDC) was retained onto the fabric surface and methyl isobutyl ketone (MIBK) was used to elute the analytes prior to atomization. For 90s preconcentration time, enrichment factors of 140 and 38 and detection limits (3σ) of 1.8 and 0.4μgL(-1) were achieved for lead and cadmium determination, respectively, with a sampling frequency of 30h(-1). The accuracy of the proposed method was estimated by analyzing standard reference materials and spiked water samples. Copyright © 2016 Elsevier B.V. All rights reserved.

  11. Line profile analyses of a martensitic steel during continuous and stepwise tensile deformations

    Science.gov (United States)

    Kawasaki, T.; Harjo, S.; Gong, W.; Aizawa, K.

    2016-09-01

    Dislocation characteristics in an as-quenched 22SiMn2TiB martensitic steel during tensile deformation were monitored by in-situ time-of-flight neutron diffraction combined with the Convolutional Multiple Whole Profile fitting analysis. Two loading conditions, continuous and stepwise followed by unloading, were adopted in the experiments. The diffraction patterns both in the loading (axial) and the transversal directions were measured simultaneously. The dislocation densities obtained from the experiments behaved differently in two loading conditions and in two measured directions, respectively. The different behaviour was mainly due to the increase of intergranular strains with the increase of deformation, and the profiles measured in the axial direction in the loading condition of stepwise followed by unloading gave most reliable dislocation characteristics among the profiles measured in other conditions.

  12. The inclusion of Duroc breed in maternal line affects pork quality and fatty acid profile.

    Science.gov (United States)

    Alonso, Verónica; Muela, Erica; Gutiérrez, Beatriz; Calanche, Juan Benito; Roncalés, Pedro; Beltrán, José A

    2015-09-01

    The aim of this study was to evaluate the effect of including different percentages of Duroc (D) breed in maternal line [Landrace (LR) × Large White (LW); LR × (LW × D); LR × D] and gender on meat quality and intramuscular (IMF) and subcutaneous (SCF) fatty acid composition. No significant differences were found among dam lines in ultimate pH, L* values and drip and cooking losses. There were higher percentages of saturated fatty acids in LR × D and LR × (LW × D) lines and higher percentages of polyunsaturated fatty acids in LR × LW line in IMF and SCF. Also, LR × D line produced pork with a lower Warner-Bratzler shear force values and higher IMF content and potential of lipid oxidation. Furthermore, the L*, a* and b* values and drip loss were greater in pork from entire males than females. The IMF and SCF of females were more monounsaturated and less polyunsaturated than those from entire males. Copyright © 2015 Elsevier Ltd. All rights reserved.

  13. Vison guidance of a laser profiler for monitoring refractory lining wear in steel mills

    Science.gov (United States)

    Ailisto, Heikki J.; Mitikka, Risto S.; Moring, Ilkka; Jokinen, Hannu

    1995-09-01

    A laser rangefinder-based optical coordinate measurement system used for monitoring refractory lining wear in steel mills has been equipped with a vision system to improve its operative and performance characteristics. The 3D shape of the refractory lining is measured after renewal at the beginning of a campaign and these data are stored as a reference. During the campaign the lining is measured and the results are compared against the reference data in order to minimize risks and optimize lining life. To make the results measured at different times comparable, they must be accurately and reliably transformed to the same coordinate system. This makes the coordinate system setup phase critical for the success of the lining wear monitoring. Other important aspects are the amount of expensive process time taken up by the measurements and work safety aspects. The experimental vision system has been tesetd for automating the corrdinate system setup phase, and improved repeatability and faster operation compared with manual setup was achieved. Tentative tests at a steel mill proved promising, and further development of the vision system is going on.

  14. On-line sequential injection dispersive liquid-liquid microextraction system for flame atomic absorption spectrometric determination of copper and lead in water samples.

    Science.gov (United States)

    Anthemidis, Aristidis N; Ioannou, Kallirroy-Ioanna G

    2009-06-30

    A simple, sensitive and powerful on-line sequential injection (SI) dispersive liquid-liquid microextraction (DLLME) system was developed as an alternative approach for on-line metal preconcentration and separation, using extraction solvent at microlitre volume. The potentials of this novel schema, coupled to flame atomic absorption spectrometry (FAAS), were demonstrated for trace copper and lead determination in water samples. The stream of methanol (disperser solvent) containing 2.0% (v/v) xylene (extraction solvent) and 0.3% (m/v) ammonium diethyldithiophosphate (chelating agent) was merged on-line with the stream of sample (aqueous phase), resulting a cloudy mixture, which was consisted of fine droplets of the extraction solvent dispersed entirely into the aqueous phase. By this continuous process, metal chelating complexes were formed and extracted into the fine droplets of the extraction solvent. The hydrophobic droplets of organic phase were retained into a microcolumn packed with PTFE-turnings. A portion of 300 microL isobutylmethylketone was used for quantitative elution of the analytes, which transported directly to the nebulizer of FAAS. All the critical parameters of the system such as type of extraction solvent, flow-rate of disperser and sample, extraction time as well as the chemical parameters were studied. Under the optimum conditions the enhancement factor for copper and lead was 560 and 265, respectively. For copper, the detection limit and the precision (R.S.D.) were 0.04 microg L(-1) and 2.1% at 2.0 microg L(-1) Cu(II), respectively, while for lead were 0.54 microg L(-1) and 1.9% at 30.0 microg L(-1) Pb(II), respectively. The developed method was evaluated by analyzing certified reference material and applied successfully to the analysis of environmental water samples.

  15. Determination of Ultra-trace Amounts of Arsenic(III) by Flow Injection Hydride Generation Atomic Absorption Spectrometry with On-line Preconcentration by Coprecipitation with Lanthanum Hydroxide or Hafnium Hydroxide

    DEFF Research Database (Denmark)

    Nielsen, Steffen; Sloth, Jens Jørgen; Hansen, Elo Harald

    1996-01-01

    A time-based flow-injection (FI) procedure for the determination of ultra-trace amounts of inorganic arsenic(III) is described, which combines hydride generation atomic absorption spectrometry (HG-AAS) with on-line preconcentration of the analyte by inorganic coprecipitation-dissolution in a filt......A time-based flow-injection (FI) procedure for the determination of ultra-trace amounts of inorganic arsenic(III) is described, which combines hydride generation atomic absorption spectrometry (HG-AAS) with on-line preconcentration of the analyte by inorganic coprecipitation...

  16. Modification of SOL profiles and fluctuations with line-average density and divertor flux expansion in TCV

    Science.gov (United States)

    Vianello, N.; Tsui, C.; Theiler, C.; Allan, S.; Boedo, J.; Labit, B.; Reimerdes, H.; Verhaegh, K.; Vijvers, W. A. J.; Walkden, N.; Costea, S.; Kovacic, J.; Ionita, C.; Naulin, V.; Nielsen, A. H.; Rasmussen, J. Juul; Schneider, B.; Schrittwieser, R.; Spolaore, M.; Carralero, D.; Madsen, J.; Lipschultz, B.; Militello, F.; The TCV Team; The EUROfusion MST1 Team

    2017-11-01

    A set of Ohmic density ramp experiments addressing the role of parallel connection length in modifying scrape off layer (SOL) properties has been performed on the TCV tokamak. The parallel connection length has been modified by varying the poloidal flux expansion f x . It will be shown that this modification does not influence neither the detachment density threshold, nor the development of a flat SOL density profile which instead depends strongly on the increase of the core line average density. The modification of the SOL upstream profile, with the appearance of what is generally called a density shoulder, has been related to the properties of filamentary blobs. Blob size increases with density, without any dependence on the parallel connection length both in the near and far SOL. The increase of the density decay length, corresponding to a profile flattening, has been related to the variation of the divertor normalized collisionality Λ_div (Myra et al 2006 Phys. Plasmas 13 112502, Carralero et al, ASDEX Upgrade Team, JET Contributors and EUROfusion MST1 Team 2015 Phys. Rev. Let. 115 215002), showing that in TCV the increase of Λ_div is not sufficient to guarantee the SOL upstream profile flattening.

  17. PROFILES AND PREFERENCES OF ON-LINE MILLENIAL SHOPPERS IN BULGARIA

    OpenAIRE

    Patricia R. Loubeau; Robert Jantzen; Elitsa Alexander

    2014-01-01

    This research seeks to develop a better understanding of the factors affecting on-line purchasing behavior among Generation Y (Gen Y) consumers in Bulgaria. Also called millenials and born between the mid-1970s and late 1990s, this generation is especially active on-line and will be a dominant influence shaping e-commerce. An empirical study was conducted based on a written survey of a sample consisting of 367 high school and university students in Bulgaria. The most important reason why Bulg...

  18. Comparison of lung cancer cell lines representing four histopathological subtypes with gene expression profiling using quantitative real-time PCR

    Directory of Open Access Journals (Sweden)

    Kawaguchi Makoto

    2010-01-01

    Full Text Available Abstract Background Lung cancers are the most common type of human malignancy and are intractable. Lung cancers are generally classified into four histopathological subtypes: adenocarcinoma (AD, squamous cell carcinoma (SQ, large cell carcinoma (LC, and small cell carcinoma (SC. Molecular biological characterization of these subtypes has been performed mainly using DNA microarrays. In this study, we compared the gene expression profiles of these four subtypes using twelve human lung cancer cell lines and the more reliable quantitative real-time PCR (qPCR. Results We selected 100 genes from public DNA microarray data and examined them by DNA microarray analysis in eight test cell lines (A549, ABC-1, EBC-1, LK-2, LU65, LU99, STC 1, RERF-LC-MA and a normal control lung cell line (MRC-9. From this, we extracted 19 candidate genes. We quantified the expression of the 19 genes and a housekeeping gene, GAPDH, with qPCR, using the same eight cell lines plus four additional validation lung cancer cell lines (RERF-LC-MS, LC-1/sq, 86-2, and MS-1-L. Finally, we characterized the four subtypes of lung cancer cell lines using principal component analysis (PCA of gene expression profiling for 12 of the 19 genes (AMY2A, CDH1, FOXG1, IGSF3, ISL1, MALL, PLAU, RAB25, S100P, SLCO4A1, STMN1, and TGM2. The combined PCA and gene pathway analyses suggested that these genes were related to cell adhesion, growth, and invasion. S100P in AD cells and CDH1 in AD and SQ cells were identified as candidate markers of these lung cancer subtypes based on their upregulation and the results of PCA analysis. Immunohistochemistry for S100P and RAB25 was closely correlated to gene expression. Conclusions These results show that the four subtypes, represented by 12 lung cancer cell lines, were well characterized using qPCR and PCA for the 12 genes examined. Certain genes, in particular S100P and CDH1, may be especially important for distinguishing the different subtypes. Our results

  19. Property profiling of biosimilar mucus in a novel mucus-containing in vitro model for assessment of intestinal drug absorption

    DEFF Research Database (Denmark)

    Bøgh, Marie; Baldursdóttir, Stefania G; Müllertz, Anette

    2014-01-01

    to establish a more representative in vitro model for the intestinal mucosa. The rheological profile of a biosimilar mucus mixture composed of purified gastric mucin, lipids and protein in buffer was optimized by supplementing with an anionic polymer to display viscoelastic properties and a microstructure...

  20. Dietary hemoglobin rescues young piglets from severe iron deficiency anemia: Duodenal expression profile of genes involved in heme iron absorption.

    Directory of Open Access Journals (Sweden)

    Robert Staroń

    Full Text Available Heme is an efficient source of iron in the diet, and heme preparations are used to prevent and cure iron deficiency anemia in humans and animals. However, the molecular mechanisms responsible for heme absorption remain only partially characterized. Here, we employed young iron-deficient piglets as a convenient animal model to determine the efficacy of oral heme iron supplementation and investigate the pathways of heme iron absorption. The use of bovine hemoglobin as a dietary source of heme iron was found to efficiently counteract the development of iron deficiency anemia in piglets, although it did not fully rebalance their iron status. Our results revealed a concerted increase in the expression of genes responsible for apical and basolateral heme transport in the duodenum of piglets fed a heme-enriched diet. In these animals the catalytic activity of heme oxygenase 1 contributed to the release of elemental iron from the protoporphyrin ring of heme within enterocytes, which may then be transported by the strongly expressed ferroportin across the basolateral membrane to the circulation. We hypothesize that the well-recognized high bioavailability of heme iron may depend on a split pathway mediating the transport of heme-derived elemental iron and intact heme from the interior of duodenal enterocytes to the bloodstream.

  1. Estimating genetic parameters for fertility in dairy cows from in-line milk progesterone profiles

    NARCIS (Netherlands)

    Tenghe, A.M.M.; Bouwman, A.C.; Berglund, B.; Strandberg, E.; Blom, J.; Veerkamp, R.F.

    2015-01-01

    The aim of this study was to define endocrine fertility traits from in-line milk progesterone (P4) records and to estimate genetic parameters for these traits. Correlations of classical fertility (calving interval and calving to first service) and milk production traits with endocrine fertility

  2. Tunable diode laser absorption spectroscopy-based tomography system for on-line monitoring of two-dimensional distributions of temperature and H{sub 2}O mole fraction

    Energy Technology Data Exchange (ETDEWEB)

    Xu, Lijun, E-mail: lijunxu@buaa.edu.cn; Liu, Chang; Jing, Wenyang; Cao, Zhang [School of Instrument Science and Opto-Electronic Engineering, Beihang University, Beijing 100191 (China); Ministry of Education’s Key Laboratory of Precision Opto-Mechatronics Technology, Beijing 100191 (China); Xue, Xin; Lin, Yuzhen [School of Energy and Power Engineering, Beihang University, Beijing 100191 (China)

    2016-01-15

    To monitor two-dimensional (2D) distributions of temperature and H{sub 2}O mole fraction, an on-line tomography system based on tunable diode laser absorption spectroscopy (TDLAS) was developed. To the best of the authors’ knowledge, this is the first report on a multi-view TDLAS-based system for simultaneous tomographic visualization of temperature and H{sub 2}O mole fraction in real time. The system consists of two distributed feedback (DFB) laser diodes, a tomographic sensor, electronic circuits, and a computer. The central frequencies of the two DFB laser diodes are at 7444.36 cm{sup −1} (1343.3 nm) and 7185.6 cm{sup −1} (1391.67 nm), respectively. The tomographic sensor is used to generate fan-beam illumination from five views and to produce 60 ray measurements. The electronic circuits not only provide stable temperature and precise current controlling signals for the laser diodes but also can accurately sample the transmitted laser intensities and extract integrated absorbances in real time. Finally, the integrated absorbances are transferred to the computer, in which the 2D distributions of temperature and H{sub 2}O mole fraction are reconstructed by using a modified Landweber algorithm. In the experiments, the TDLAS-based tomography system was validated by using asymmetric premixed flames with fixed and time-varying equivalent ratios, respectively. The results demonstrate that the system is able to reconstruct the profiles of the 2D distributions of temperature and H{sub 2}O mole fraction of the flame and effectively capture the dynamics of the combustion process, which exhibits good potential for flame monitoring and on-line combustion diagnosis.

  3. Saturated two-photon absorption by atoms in a perturber gas

    International Nuclear Information System (INIS)

    Nienhuis, G.

    1980-01-01

    We derive a general expression for the two-photon absorption spectrum of a three-state atom excited by two mono-chromatic radiation fields. Collisional line-broadening effects are incorporated, and the result allows inclusion of profiles with a validity outside the impact limit. Results of previous work are recovered in the appropriate limits. Saturation affects the different lines in the two-photon absorption spectrum in a different fashion. (orig.)

  4. Alterations in gene expression profiles correlated with cisplatin cytotoxicity in the glioma U343 cell line

    OpenAIRE

    Patricia Oliveira Carminati; Stephano Spano Mello; Ana Lucia Fachin; Cristina Moraes Junta; Paula Sandrin-Garcia; Carlos Gilberto Carlotti; Eduardo Antonio Donadi; Geraldo Aleixo Silva Passos; Elza Tiemi Sakamoto-Hojo

    2010-01-01

    Gliomas are the most common tumors in the central nervous system, the average survival time of patients with glioblastoma multiforme being about 1 year from diagnosis, in spite of harsh therapy. Aiming to study the transcriptional profiles displayed by glioma cells undergoing cisplatin treatment, gene expression analysis was performed by the cDNA microarray method. Cell survival and apoptosis induction following treatment were also evaluated. Drug concentrations of 12.5 to 300 μM caused ...

  5. On the line-shape analysis of Compton profiles and its application to neutron scattering

    International Nuclear Information System (INIS)

    Romanelli, G.; Krzystyniak, M.

    2016-01-01

    Analytical properties of Compton profiles are used in order to simplify the analysis of neutron Compton scattering experiments. In particular, the possibility to fit the difference of Compton profiles is discussed as a way to greatly decrease the level of complexity of the data treatment, making the analysis easier, faster and more robust. In the context of the novel method proposed, two mathematical models describing the shapes of differenced Compton profiles are discussed: the simple Gaussian approximation for harmonic and isotropic local potential, and an analytical Gauss–Hermite expansion for an anharmonic or anisotropic potential. The method is applied to data collected by VESUVIO spectrometer at ISIS neutron and muon pulsed source (UK) on Copper and Aluminium samples at ambient and low temperatures. - Highlights: • A new method to analyse neutron Compton scattering data is presented. • The method allows many corrections on the experimental data to be avoided. • The number of needed fitting parameters is drastically reduced using the new method. • Mass-selective analysis is facilitated with parametric studies benefiting the most. • Observables linked to anisotropic momentum distribution are obtained analytically.

  6. EVIDENCE FOR ULTRA-FAST OUTFLOWS IN RADIO-QUIET ACTIVE GALACTIC NUCLEI. II. DETAILED PHOTOIONIZATION MODELING OF Fe K-SHELL ABSORPTION LINES

    International Nuclear Information System (INIS)

    Tombesi, F.; Cappi, M.; Dadina, M.; Reeves, J. N.; Palumbo, G. G. C.; Braito, V.

    2011-01-01

    X-ray absorption line spectroscopy has recently shown evidence for previously unknown Ultra-fast Outflows (UFOs) in radio-quiet active galactic nuclei (AGNs). These have been detected essentially through blueshifted Fe XXV/XXVI K-shell transitions. In the previous paper of this series we defined UFOs as those highly ionized absorbers with an outflow velocity higher than 10,000 km s –1 and assessed the statistical significance of the associated blueshifted absorption lines in a large sample of 42 local radio-quiet AGNs observed with XMM-Newton. The present paper is an extension of that work. First, we report a detailed curve of growth analysis of the main Fe XXV/XXVI transitions in photoionized plasmas. Then, we estimate an average spectral energy distribution for the sample sources and directly model the Fe K absorbers in the XMM-Newton spectra with the detailed Xstar photoionization code. We confirm that the frequency of sources in the radio-quiet sample showing UFOs is >35% and that the majority of the Fe K absorbers are indeed associated with UFOs. The outflow velocity distribution spans from ∼10,000 km s –1 (∼0.03c) up to ∼100,000 km s –1 (∼0.3c), with a peak and mean value of ∼42,000 km s –1 (∼0.14c). The ionization parameter is very high and in the range log ξ ∼ 3-6 erg s –1 cm, with a mean value of log ξ ∼ 4.2 erg s –1 cm. The associated column densities are also large, in the range N H ∼ 10 22 -10 24 cm –2 , with a mean value of N H ∼ 10 23 cm –2 . We discuss and estimate how selection effects, such as those related to the limited instrumental sensitivity at energies above 7 keV, may hamper the detection of even higher velocities and higher ionization absorbers. We argue that, overall, these results point to the presence of extremely ionized and possibly almost Compton-thick outflowing material in the innermost regions of AGNs. This also suggests that UFOs may potentially play a significant role in the expected

  7. Evidence for Ultra-fast Outflows in Radio-quiet Active Galactic Nuclei. II. Detailed Photoionization Modeling of Fe K-shell Absorption Lines

    Science.gov (United States)

    Tombesi, F.; Cappi, M.; Reeves, J. N.; Palumbo, G. G. C.; Braito, V.; Dadina, M.

    2011-11-01

    X-ray absorption line spectroscopy has recently shown evidence for previously unknown Ultra-fast Outflows (UFOs) in radio-quiet active galactic nuclei (AGNs). These have been detected essentially through blueshifted Fe XXV/XXVI K-shell transitions. In the previous paper of this series we defined UFOs as those highly ionized absorbers with an outflow velocity higher than 10,000 km s-1 and assessed the statistical significance of the associated blueshifted absorption lines in a large sample of 42 local radio-quiet AGNs observed with XMM-Newton. The present paper is an extension of that work. First, we report a detailed curve of growth analysis of the main Fe XXV/XXVI transitions in photoionized plasmas. Then, we estimate an average spectral energy distribution for the sample sources and directly model the Fe K absorbers in the XMM-Newton spectra with the detailed Xstar photoionization code. We confirm that the frequency of sources in the radio-quiet sample showing UFOs is >35% and that the majority of the Fe K absorbers are indeed associated with UFOs. The outflow velocity distribution spans from ~10,000 km s-1 (~0.03c) up to ~100,000 km s-1 (~0.3c), with a peak and mean value of ~42,000 km s-1 (~0.14c). The ionization parameter is very high and in the range log ξ ~ 3-6 erg s-1 cm, with a mean value of log ξ ~ 4.2 erg s-1 cm. The associated column densities are also large, in the range N H ~ 1022-1024 cm-2, with a mean value of N H ~ 1023 cm-2. We discuss and estimate how selection effects, such as those related to the limited instrumental sensitivity at energies above 7 keV, may hamper the detection of even higher velocities and higher ionization absorbers. We argue that, overall, these results point to the presence of extremely ionized and possibly almost Compton-thick outflowing material in the innermost regions of AGNs. This also suggests that UFOs may potentially play a significant role in the expected cosmological feedback from AGNs and their study can

  8. Evidence for Ultra-Fast Outflows in Radio-Quiet AGNs. 2; Detailed Photoionization Modeling of Fe K-Shell Absorption Lines

    Science.gov (United States)

    Tombesi, Francesco; Clapp, M.; Reeves, J. N.; Palumbo, G. G. C.; Braito, V.; Dadina, M.

    2011-01-01

    X-ray absorption line spectroscopy has recently shown evidence for previously unknown Ultra-fast Outflows (UFOs) in radio-quiet AGNs. In the previous paper of this series we defined UFOs as those absorbers with an outflow velocity higher than 10,000km/s and assessed the statistical significance of the associated blue shifted FeK absorption lines in a large sample of 42 local radio-quiet AGNs observed with XMM-Newton. In the present paper we report a detailed curve of growth analysis and directly model the FeK absorbers with the Xstar photo-ionization code. We confirm that the frequency of sources in the radio-quiet sample showing UFOs is >35%. The outflow velocity distribution spans from \\sim10,000km/s (\\sim0.03c) up to \\siml00,000kmis (\\sim0.3c), with a peak and mean value of\\sim42,000km/s (\\sim0.14c). The ionization parameter is very high and in the range log\\xi 3-6 erg s/cm, with a mean value of log\\xi 4.2 erg s/cm. The associated column densities are also large, in the range N_H\\siml0(exp 22)-10(exp 24)/sq cm, with a mean value of N_H\\siml0(exp23)/sq cm. We discuss and estimate how selection effects, such as those related to the limited instrumental sensitivity at energies above 7keV, may hamper the detection of even higher velocities and higher ionization absorbers. We argue that, overall, these results point to the presence of extremely ionized and possibly almost Compton thick outflowing material in the innermost regions of AGNs. This also suggests that UFOs may potentially play a significant role in the expected cosmological feedback from AGNs and their study can provide important clues on the connection between accretion disks, winds and jets.

  9. MiRNA Profiles in Lymphoblastoid Cell Lines of Finnish Prostate Cancer Families.

    Directory of Open Access Journals (Sweden)

    Daniel Fischer

    Full Text Available Heritable factors are evidently involved in prostate cancer (PrCa carcinogenesis, but currently, genetic markers are not routinely used in screening or diagnostics of the disease. More precise information is needed for making treatment decisions to distinguish aggressive cases from indolent disease, for which heritable factors could be a useful tool. The genetic makeup of PrCa has only recently begun to be unravelled through large-scale genome-wide association studies (GWAS. The thus far identified Single Nucleotide Polymorphisms (SNPs explain, however, only a fraction of familial clustering. Moreover, the known risk SNPs are not associated with the clinical outcome of the disease, such as aggressive or metastasised disease, and therefore cannot be used to predict the prognosis. Annotating the SNPs with deep clinical data together with miRNA expression profiles can improve the understanding of the underlying mechanisms of different phenotypes of prostate cancer.In this study microRNA (miRNA profiles were studied as potential biomarkers to predict the disease outcome. The study subjects were from Finnish high risk prostate cancer families. To identify potential biomarkers we combined a novel non-parametrical test with an importance measure provided from a Random Forest classifier. This combination delivered a set of nine miRNAs that was able to separate cases from controls. The detected miRNA expression profiles could predict the development of the disease years before the actual PrCa diagnosis or detect the existence of other cancers in the studied individuals. Furthermore, using an expression Quantitative Trait Loci (eQTL analysis, regulatory SNPs for miRNA miR-483-3p that were also directly associated with PrCa were found.Based on our findings, we suggest that blood-based miRNA expression profiling can be used in the diagnosis and maybe even prognosis of the disease. In the future, miRNA profiling could possibly be used in targeted screening

  10. Deep seismic reflection profiling in the Swiss Alps: Explosion seismology results for line NFP 20-East

    Science.gov (United States)

    Pfiffner, 0. A.; Frei, W.; Finckh, P.; Valasek, P.

    1988-11-01

    In September 1986, a 120-km-long seismic line was recorded through the Swiss Alps. The line traverses major units involved in thin- and thick-skinned Alpine tectonics. Our preliminary interpretation indicates that (1) lithologic boundaries such as basement-cover contacts, although severely deformed during the Alpine orogeny, can be identified on the seismic sections; (2) the top of the Aar massif, an external basement massif, extends deep into the Alpine orogen; (3) the upper and lower parts of the crust are more or less transparent, but are separated by a swarm of reflectors at mid-crustal level; (4) these mid-crustal reflectors might be related to trapped fluids from Alpine metamorphism; and (5) the Moho appears as a bright reflection that steepens from the north toward the south and terminates abruptly near the center of the Alpine chain, perhaps because of Alpine deformation.

  11. Soil N mineralization profiles of co-existing woody vegetation islands at the alpine tree line

    Czech Academy of Sciences Publication Activity Database

    Wang, L.; Godbold, Douglas

    2017-01-01

    Roč. 136, 5-6 (2017), s. 881-892 ISSN 1612-4669 R&D Projects: GA MŠk(CZ) LO1415 Institutional support: RVO:67179843 Keywords : Tree line * Soil N mineralization * in situ field incubation * Soil N availability * Resin capsule * Woody vegetation islands Subject RIV: DF - Soil Science OBOR OECD: Soil science Impact factor: 2.017, year: 2016

  12. De novo-based transcriptome profiling of male-sterile and fertile watermelon lines.

    Science.gov (United States)

    Rhee, Sun-Ju; Kwon, Taehyung; Seo, Minseok; Jang, Yoon Jeong; Sim, Tae Yong; Cho, Seoae; Han, Sang-Wook; Lee, Gung Pyo

    2017-01-01

    The whole-genome sequence of watermelon (Citrullus lanatus (Thunb.) Matsum. & Nakai), a valuable horticultural crop worldwide, was released in 2013. Here, we compared a de novo-based approach (DBA) to a reference-based approach (RBA) using RNA-seq data, to aid in efforts to improve the annotation of the watermelon reference genome and to obtain biological insight into male-sterility in watermelon. We applied these techniques to available data from two watermelon lines: the male-sterile line DAH3615-MS and the male-fertile line DAH3615. Using DBA, we newly annotated 855 watermelon transcripts, and found gene functional clusters predicted to be related to stimulus responses, nucleic acid binding, transmembrane transport, homeostasis, and Golgi/vesicles. Among the DBA-annotated transcripts, 138 de novo-exclusive differentially-expressed genes (DEDEGs) related to male sterility were detected. Out of 33 randomly selected newly annotated transcripts and DEDEGs, 32 were validated by RT-qPCR. This study demonstrates the usefulness and reliability of the de novo transcriptome assembly in watermelon, and provides new insights for researchers exploring transcriptional blueprints with regard to the male sterility.

  13. Inositol Pyrophosphate Profiling of Two HCT116 Cell Lines Uncovers Variation in InsP8 Levels.

    Directory of Open Access Journals (Sweden)

    Chunfang Gu

    Full Text Available The HCT116 cell line, which has a pseudo-diploid karotype, is a popular model in the fields of cancer cell biology, intestinal immunity, and inflammation. In the current study, we describe two batches of diverged HCT116 cells, which we designate as HCT116NIH and HCT116UCL. Using both gel electrophoresis and HPLC, we show that HCT116UCL cells contain 6-fold higher levels of InsP8 than HCT116NIH cells. This observation is significant because InsP8 is one of a group of molecules collectively known as 'inositol pyrophosphates' (PP-InsPs-highly 'energetic' and conserved regulators of cellular and organismal metabolism. Variability in the cellular levels of InsP8 within divergent HCT116 cell lines could have impacted the phenotypic data obtained in previous studies. This difference in InsP8 levels is more remarkable for being specific; levels of other inositol phosphates, and notably InsP6 and 5-InsP7, are very similar in both HCT116NIH and HCT116UCL lines. We also developed a new HPLC procedure to record 1-InsP7 levels directly (for the first time in any mammalian cell line; 1-InsP7 comprised <2% of total InsP7 in HCT116NIH and HCT116UCL lines. The elevated levels of InsP8 in the HCT116UCL lines were not due to an increase in expression of the PP-InsP kinases (IP6Ks and PPIP5Ks, nor to a decrease in the capacity to dephosphorylate InsP8. We discuss how the divergent PP-InsP profiles of the newly-designated HCT116NIH and HCT116UCL lines should be considered an important research opportunity: future studies using these two lines may uncover new features that regulate InsP8 turnover, and may also yield new directions for studying InsP8 function.

  14. Correlation of antinuclear antibody immunofluorescence patterns with immune profile using line immunoassay in the Indian scenario

    Directory of Open Access Journals (Sweden)

    Sebastian Wendy

    2010-07-01

    Full Text Available Background: Immunity status, individual response to disease and types of antibodies produced are well known to vary from person to person, place to place and probably from population to population. A broad spectrum of specific auto antibodies that have so far been associated with specific rheumatic diseases, as noted in Western literature, has been well taken as a reference standard all over the world. There is neither research work nor any data correlating the auto antibodies and their antinuclear antibody (ANA patterns with the immunoprofile in the Indian population to date. Aims: To understand a definite association between ANA patterns and specific antibodies in the serum in the Indian study population and to document similarities / differences with the West. Settings and Design: This prospective and retrospective double blind study was undertaken on the South Indian population referred for ANA testing by Indirect Immunofluorescence method and by immunoline methods. Materials and Methods: Serum samples of patients from a random South Indian population who sought medical help for rheumatic disease were subjected for ANA testing by indirect immunofluorescence (IIF method and line immunoassay during the study period of 27 months. Serum samples were processed in dilution of 1:100 using HEp - 2010 / liver biochip (Monkey (EUROIMMUN AG. The serum samples which were further processed for line immunoassay were treated in 1:100 dilution on nylon strips coated with recombinant and purified antigens as discrete lines with plastic backing (EUROIMMUN AG coated with antigens nRNP / Sm, Sm, SSA, Ro-52, SSB, Scl-70, PM-Scl, PCNA, Jo-1, CENP-B, dsDNA, nucleosomes, histones, ribosomal protein-P, anti-mitochondrial antibodies (AMA-M2 along with a control band. The analysis was done by comparing the intensity of the reaction with positive control line by image analysis. Results: The antinuclear antibody indirect immunofluorescence (ANA - IIF patterns obtained

  15. Accumulation Profiles of Embryonic Salt-Soluble Proteins in Maize Hybrids and Parental Lines Indicate Matroclinous Inheritance: A Proteomic Analysis

    Directory of Open Access Journals (Sweden)

    Fen Ning

    2017-10-01

    Full Text Available Maize is one of the most widely cultivated crops. It accumulates a large quantity of seed storage proteins, which are important for seed development and germination, and contribute to the nutritional quality of seeds. Based on solubility, the storage proteins are divided into albumins (water-soluble, globulins (salt-soluble, prolamins (alcohol-soluble, and glutelins (acid- or alkali-soluble. Maize hybrids are cultivated due to the superior performance of F1 hybrids than that of their parents, a phenomenon known as heterosis. However, the accumulation patterns of seed storage proteins in maize embryos between the hybrids and their parental inbred lines have not been compared. In the present study, two elite inbred lines of China, Zheng 58 and Chang 7-2, and their reciprocal hybrids (Zheng 58 × Chang 7-2 and Chang 7-2 × Zheng 58 were used to explore parental influences on the accumulation patterns of seed storage proteins in maize embryos. For this purpose, we focused on seed salt-soluble proteins (SSPs in our experiments. The SSPs were selectively extracted from maize mature embryos after extensive removal of water-soluble albumin and separated using two-dimensional gel electrophoresis (2-DE, followed by mass spectrometry analysis. Our results indicated that the 2-DE SSP profiles of hybrids closely resembled those of their maternal parent rather than the paternal parent. In other words, 2-DE SSP profiles of Zheng 58 × Chang 7-2 were more similar those of Zheng 58 whereas such profiles of Chang 7-2 × Zheng 58 were more similar to those of Chang 7-2 although the 2-DE profiles of all four maize types were quite similar. In total, 12 relatively abundant SSPs spots representing five kinds of proteins were identified, of which nine protein spots displayed non-additive accumulation in at least one hybrid. This study provided additional data on dominance and partial dominance effects on maize hybrids embryos. Besides, earlier studies on accumulation

  16. Modification of SOL profiles and fluctuations with line-average density and divertor flux expansion in TCV

    DEFF Research Database (Denmark)

    Vianello, N.; Tsui, C.; Theiler, C.

    2017-01-01

    A set of Ohmic density ramp experiments addressing the role of parallel connection length in modifying scrape off layer (SOL) properties has been performed on the TCV tokamak. The parallel connection length has been modified by varying the poloidal flux expansion fx. It will be shown that this mo......A set of Ohmic density ramp experiments addressing the role of parallel connection length in modifying scrape off layer (SOL) properties has been performed on the TCV tokamak. The parallel connection length has been modified by varying the poloidal flux expansion fx. It will be shown...... that this modification does not influence neither the detachment density threshold, nor the development of a flat SOL density profile which instead depends strongly on the increase of the core line average density. The modification of the SOL upstream profile, with the appearance of what is generally called a density...... shoulder, has been related to the properties of filamentary blobs. Blob size increases with density, without any dependence on the parallel connection length both in the near and far SOL. The increase of the density decay length, corresponding to a profile flattening, has been related to the variation...

  17. Separation of seven arsenic compounds by high-performance liquid chromatography with on-line detection by hydrogen–argon flame atomic absorption spectrometry and inductively coupled plasma mass spectrometry

    DEFF Research Database (Denmark)

    Hansen, S. H.; Larsen, E. H.; Pritzl, G.

    1992-01-01

    Seven molecular forms of arsenic were separated by anion- and cation-exchange high-performance liquid chromatography (HPLC) with on-line detection by flame atomic absorption spectrometry (FAAS). The interfacing was established by a vented poly(tetrafluoroethylene) capillary tubing connecting the ...

  18. Sequential injection on-line matrix removal and trace metal preconcentration using a PTFE beads packed column as demonstrated for the determination of cadmium by electrothermal atomic absorption spectrometry

    DEFF Research Database (Denmark)

    Wang, Jianhua; Hansen, Elo Harald

    2002-01-01

    A sequential injection (SI) on-line matrix removal and trace metal preconcentration procedure by using a novel microcolumn packed with PTFE beads is described, and demonstrated for trace cadmium analysis with detection by electrothermal atomic absorption spectrometry (ETAAS). The analyte...

  19. Determination of trace metal ions via on-line separation and preconcentration by means of chelating Sepharose beads in a sequential injection lab-on-valve (SI-LOV) system coupled to electrothermal atomic absorption spectrometric detection

    DEFF Research Database (Denmark)

    Long, Xiangbao; Hansen, Elo Harald; Miró, Manuel

    2005-01-01

    The analytical performance of an on-line sequential injection lab-on-valve (SI-LOV) system using chelating Sepharose beads as sorbent material for the determination of ultra trace levels of Cd(II), Pb(II) and Ni(II) by electrothermal atomic absorption spectrometry (ETAAS) is described and discussed...

  20. Determination of As(III) and As(V) by Flow Injection-Hydride Generation-Atomic Absorption Spectrometry via On-line Reduction of As(V) by KI

    DEFF Research Database (Denmark)

    Nielsen, Steffen; Hansen, Elo Harald

    1997-01-01

    A volume-based flow injection (FI) procedure is described for the determination and speciation of trace inorganic arsenic, As(III) and As(V), via hydride generation-atomic absorption spectrometry (HG-AAS) of As(III). The determination of total arsenic is obtained by on-line reduction of As(V) to As...

  1. On-line preconcentration system using a microcolumn packed with Alizarin Red S-modified alumina for zinc determination by flame atomic absorption spectrometry

    Directory of Open Access Journals (Sweden)

    A.M. Haji Shabani

    2009-01-01

    Full Text Available A simple and sensitive on-line flow injection system for determination of zinc with FAAS has been described. The method is based on the separation and preconcentration of zinc on a microcolumn of immobilized Alizarin Red S on alumina. The adsorbed analyte is then eluted with 250 µL of nitric acid (1 mol L-1 and is transported to flame atomic absorption spectrometer for quantification. The effect of pH, sample and eluent flow rates and presence of various cations and anions on the retention of zinc was investigated. The sorption of zinc was quantitative in the pH range of 5.5-8.5. For a sample volume of 25 mL an enrichment factor of 144 and a detection limit (3S of 0.2 µg L-1 was obtained. The precision (RSD, n=7 was 3.0% at the 20 µg L-1 level. The developed system was successfully applied to the determination of zinc in water samples, hair, urine and saliva.

  2. A novel fiber-packed column for on-line preconcentration and speciation analysis of chromium in drinking water with flame atomic absorption spectrometry.

    Science.gov (United States)

    Monasterio, Romina P; Altamirano, Jorgelina C; Martínez, Luis D; Wuilloud, Rodolfo G

    2009-02-15

    A novel on-line preconcentration and determination system based on a fiber-packed column was developed for speciation analysis of Cr in drinking water samples prior to its determination by flame atomic absorption spectrometry (FAAS). All variables involved in the development of the preconcentration method including, pH, eluent type, sample and eluent flow rates, interfering effects, etc., were studied in order to achieve the best analytical performance. A preconcentration factor of 32 was obtained for Cr(VI) and Cr(III). The levels of Cr(III) species were calculated by difference of total Cr and Cr(VI) levels. Total Cr was determined after oxidation of Cr(III) to Cr(VI) with hydrogen peroxide. The calibration graph was linear with a correlation coefficient of 0.999 at levels near the detection limit and up to at least 50 microg L(-1). The relative standard deviation (R.S.D.) was 4.3% (C=5 microg L(-1) Cr(VI), n=10, sample volume=25 mL). The limit of detection (LOD) for both Cr(III) and Cr(VI) species was 0.3 microg L(-1). Verification of the accuracy was carried out by the analysis of a standard reference material (NIST SRM 1643e "Trace elements in natural water"). The method was successfully applied to the determination of Cr(III) and Cr(VI) species in drinking water samples.

  3. Development of an x-ray beam line at the NSLS for studies in materials science using x-ray absorption spectroscopy: Annual progress report

    International Nuclear Information System (INIS)

    Sayers, D.E.

    1986-01-01

    Although only in operation since May, 1985, the X-11 participation research team (PRT) at the NSLS has already demonstrated that it is one of the leading centers of x-ray absorption spectroscopy (XAS). During this time, results have been obtained and programs initiated in a number of areas, for example: interfaces, including deposited metal-metal and metal-semiconductor systems, multilayers and ion implanted layers; electrochemical systems, including Pt electrode fuel cells, Ni oxide battery electrodes, conducting polymers, passivation and corrosion; catalysts, including highly-dispersed supported metal catalysts and zeolite systems; quasi-crystals, heavy fermion systems, uranium and neptunium compounds, rare gas clusters, disordered metals and semiconductors, ferroelectric transition; and, biological systems and related models, including synthetic porphyrins and a number of metalloproteins. In concert with these scientific results have been a number of developments involving the technique itself. These include implementation of unique optical systems on both the A and B lines for optical performance over their designed energy ranges, advances in experimental capability, particular in glancing angle studies, optimization of ion chambers for surface studies, the improvement of electron yield detectors, and improved software for data acquisition and analysis. This report emphasizes some of the research highlights and significant developments of our PRT which occurred during the past year. A detailed bibliography of papers and talks resulting from work done at our beamline and the progress reports for our PRT which were in the 1985 NSLS Annual Report are appended

  4. On-line micro-volume introduction system developed for lower density than water extraction solvent and dispersive liquid-liquid microextraction coupled with flame atomic absorption spectrometry.

    Science.gov (United States)

    Anthemidis, Aristidis N; Mitani, Constantina; Balkatzopoulou, Paschalia; Tzanavaras, Paraskevas D

    2012-07-06

    A simple and fast preconcentration/separation dispersive liquid-liquid micro extraction (DLLME) method for metal determination based on the use of extraction solvent with lower density than water has been developed. For this purpose a novel micro-volume introduction system was developed enabling the on-line injection of the organic solvent into flame atomic absorption spectrometry (FAAS). The effectiveness and efficiency of the proposed system were demonstrated for lead and copper preconcentration in environmental water samples using di-isobutyl ketone (DBIK) as extraction solvent. Under the optimum conditions the enhancement factor for lead and copper was 187 and 310 respectively. For a sample volume of 10 mL, the detection limit (3 s) and the relative standard deviation were 1.2 μg L(-1) and 3.3% for lead and 0.12 μg L(-1) and 2.9% for copper respectively. The developed method was evaluated by analyzing certified reference material and it was applied successfully to the analysis of environmental water samples. Copyright © 2012 Elsevier B.V. All rights reserved.

  5. Suppression subtractive hybridization profiles of radial growth phase and metastatic melanoma cell lines reveal novel potential targets

    Directory of Open Access Journals (Sweden)

    Espreafico Enilza M

    2008-01-01

    Full Text Available Abstract Background Melanoma progression occurs through three major stages: radial growth phase (RGP, confined to the epidermis; vertical growth phase (VGP, when the tumor has invaded into the dermis; and metastasis. In this work, we used suppression subtractive hybridization (SSH to investigate the molecular signature of melanoma progression, by comparing a group of metastatic cell lines with an RGP-like cell line showing characteristics of early neoplastic lesions including expression of the metastasis suppressor KISS1, lack of αvβ3-integrin and low levels of RHOC. Methods Two subtracted cDNA collections were obtained, one (RGP library by subtracting the RGP cell line (WM1552C cDNA from a cDNA pool from four metastatic cell lines (WM9, WM852, 1205Lu and WM1617, and the other (Met library by the reverse subtraction. Clones were sequenced and annotated, and expression validation was done by Northern blot and RT-PCR. Gene Ontology annotation and searches in large-scale melanoma expression studies were done for the genes identified. Results We identified 367 clones from the RGP library and 386 from the Met library, of which 351 and 368, respectively, match human mRNA sequences, representing 288 and 217 annotated genes. We confirmed the differential expression of all genes selected for validation. In the Met library, we found an enrichment of genes in the growth factors/receptor, adhesion and motility categories whereas in the RGP library, enriched categories were nucleotide biosynthesis, DNA packing/repair, and macromolecular/vesicular trafficking. Interestingly, 19% of the genes from the RGP library map to chromosome 1 against 4% of the ones from Met library. Conclusion This study identifies two populations of genes differentially expressed between melanoma cell lines from two tumor stages and suggests that these sets of genes represent profiles of less aggressive versus metastatic melanomas. A search for expression profiles of melanoma in

  6. Suppression subtractive hybridization profiles of radial growth phase and metastatic melanoma cell lines reveal novel potential targets

    International Nuclear Information System (INIS)

    Sousa, Josane F; Espreafico, Enilza M

    2008-01-01

    Melanoma progression occurs through three major stages: radial growth phase (RGP), confined to the epidermis; vertical growth phase (VGP), when the tumor has invaded into the dermis; and metastasis. In this work, we used suppression subtractive hybridization (SSH) to investigate the molecular signature of melanoma progression, by comparing a group of metastatic cell lines with an RGP-like cell line showing characteristics of early neoplastic lesions including expression of the metastasis suppressor KISS1, lack of αvβ3-integrin and low levels of RHOC. Two subtracted cDNA collections were obtained, one (RGP library) by subtracting the RGP cell line (WM1552C) cDNA from a cDNA pool from four metastatic cell lines (WM9, WM852, 1205Lu and WM1617), and the other (Met library) by the reverse subtraction. Clones were sequenced and annotated, and expression validation was done by Northern blot and RT-PCR. Gene Ontology annotation and searches in large-scale melanoma expression studies were done for the genes identified. We identified 367 clones from the RGP library and 386 from the Met library, of which 351 and 368, respectively, match human mRNA sequences, representing 288 and 217 annotated genes. We confirmed the differential expression of all genes selected for validation. In the Met library, we found an enrichment of genes in the growth factors/receptor, adhesion and motility categories whereas in the RGP library, enriched categories were nucleotide biosynthesis, DNA packing/repair, and macromolecular/vesicular trafficking. Interestingly, 19% of the genes from the RGP library map to chromosome 1 against 4% of the ones from Met library. This study identifies two populations of genes differentially expressed between melanoma cell lines from two tumor stages and suggests that these sets of genes represent profiles of less aggressive versus metastatic melanomas. A search for expression profiles of melanoma in available expression study databases allowed us to point to a

  7. Altered Baseline and Nicotine-Mediated Behavioral and Cholinergic Profiles in ChAT-Cre Mouse Lines.

    Science.gov (United States)

    Chen, Edison; Lallai, Valeria; Sherafat, Yasmine; Grimes, Nickolas P; Pushkin, Anna N; Fowler, J P; Fowler, Christie D

    2018-02-28

    baseline and/or nicotine-mediated behavioral profiles were discovered in transgenic mice from the ChAT (BAC) -Cre and ChAT (IRES) -Cre lines. Given that these cre-expressing mice have become increasingly used by the scientific community, either independently with chemicogenetic and optogenetic viral vectors or crossed with other transgenic lines, the current studies highlight important considerations for the interpretation of data from previous and future experimental investigations. Moreover, the current findings detail the behavioral effects of either increased or decreased baseline cholinergic signaling mechanisms on locomotor, anxiety, learning/memory, and intravenous nicotine self-administration behaviors. Copyright © 2018 the authors 0270-6474/18/382177-12$15.00/0.

  8. Profiling polyphenols of two diploid strawberry (Fragaria vesca) inbred lines using UHPLC-HRMS(n.).

    Science.gov (United States)

    Sun, Jianghao; Liu, Xianjin; Yang, Tianbao; Slovin, Janet; Chen, Pei

    2014-03-01

    Phenolic compounds in the fruits of two diploid strawberries (Fragaria vesca f. semperflorens) inbred lines-Ruegen F7-4 (a red-fruited genotype) and YW5AF7 (a yellow-fruited genotype) were characterised using ultra-high-performance liquid chromatography coupled with tandem high-resolution mass spectrometry (UHPLC-HRMS(n)). The changes of anthocyanin composition during fruit development and between Ruegen F7-4 and YW5AF7 were studied. About 67 phenolic compounds, including taxifolin 3-O-arabinoside, glycosides of quercetin, kaempferol, cyanidin, pelargonidin, peonidin, ellagic acid derivatives, and other flavonols were identified in these two inbred lines. Compared to the regular octoploid strawberry, unique phenolic compounds were found in F. vesca fruits, such as taxifolin 3-O-arabinoside (both) and peonidin 3-O-malonylglucoside (Ruegen F7-4). The results provide the basis for comparative analysis of polyphenolic compounds in yellow and red diploid strawberries, as well as with the cultivated octoploid strawberries. Published by Elsevier Ltd.

  9. Zeeman atomic absorption spectroscopy

    International Nuclear Information System (INIS)

    Loos-Vollebregt, M.T.C. de.

    1980-01-01

    A new method of background correction in atomic absorption spectroscopy has recently been introduced, based on the Zeeman splitting of spectral lines in a magnetic field. A theoretical analysis of the background correction capability observed in such instruments is presented. A Zeeman atomic absorption spectrometer utilizing a 50 Hz sine wave modulated magnetic field is described. (Auth.)

  10. High intensity beam profile monitors for the LAMPF primary beam lines

    International Nuclear Information System (INIS)

    Hoffman, E.W.; Macek, R.J.; van Dyck, O.; Lee, D.; Harvey, A.; Bridge, J.; Cainet, J.

    1979-01-01

    Two types of beam profile monitors are in use at LAMPF to measure the properties of the 800 MeV, 500 μA proton beam external to the linac. Both types use secondary electron emission from a wire to produce a current signal proportional to the amount of proton beam that intercepts the wire. The wire scanner system uses a pair of orthogonal wires which are passed through the beam and the harp system uses two fixed planes of parallel wires. Most of the harps are not retractable and are exposed continuously to the primary beam. The high beam intensities available lead to a number of technical problems for instruments that intercept the beam or are close to primary beam targets. The thermal, electrical, radiation-damage, and material selection problems encountered, and some solutions which have been implemented are discussed

  11. C IV LINE-WIDTH ANOMALIES

    DEFF Research Database (Denmark)

    Denney, Kelly Dianne; Pogge, R.W.; Assef, R.J.

    2013-01-01

    Comparison of six high-redshift quasar spectra obtained with the Large Binocular Telescope with previous observations from the Sloan Digital Sky Survey shows that failure to correctly identify absorption and other problems with accurate characterization of the CIV emission line profile in low S/N...

  12. Alterations in gene expression profiles between radioresistant and radiosensitive cell lines

    International Nuclear Information System (INIS)

    Zhou Fuxiang; Zhou Yunfeng; Xie Conghua; Dai Jing; Cao Zhen; Yu Haijun; Liao Zhengkai; Luo Zhiguo

    2007-01-01

    Objective: To study the-difference of gene expressions by the contrastive model including the cells with same pathological origin and genetic background, but definitely different radioresponse, and to find the main molecular targets related to radiosensitivity. Methods: Human larynx squamous carcinoma cell, Hep -2 was irradiated with dose of 637 cGy repeatedly to establish a radioresistant daughter cell line. The radiobiology characteristics were obtained using clone forming assay. The difference of gene expression between parent and daughter cells was detected by cDNA microarray using two different arrays including 14000 genes respectively. Results: A radioresistant cell strain Hep-2R was isolated from its parental strain Hep-2 cell. The SF 2 , D 0 , α, β for Hep-2R cell line were 0.6798, 3.24, 0.2951 and 0.0363, respectively, while 0.4148, 2.06, 0.1074 and 0.0405 for Hep-2, respectively (for SF 2 , χ 2 =63.957, P<0.001). Compared with Hep-2 cells, the expressions of 41 genes were significantly altered in the radioresistant Hep-2R cells, including 22 genes up-regulated and 19 genes down-regulated, which were involved in DNA repair, regulation of the cell cycle, cell proliferation, cytoskeleton, protein synthesis, cellular metabolism and especially apoptosis which is responsible for the different radiosensitivity between these two larynx cancer cells. The telomere protection protein gene, POT1, was the mostly up-regulated by 3.348 times. Conclusions: There is difference of gene expression between the radioresistant contrastive models. POT1 gene may be the target of radiosensitization. (authors)

  13. Small RNA Profiles of the Rice PTGMS Line Wuxiang S Reveal miRNAs Involved in Fertility Transition.

    Science.gov (United States)

    Zhang, Hongyuan; Hu, Jihong; Qian, Qian; Chen, Hao; Jin, Jing; Ding, Yi

    2016-01-01

    MicroRNAs (miRNAs) play key roles in the regulation of plant growth and developmental processes. In this study, RNA-seq was used to examine the expression profiles of miRNAs in a novel, photo-thermosensitive genic male sterile (PTGMS) rice line, Wuxiang S (WXS), during fertility transition. A total of 497 known miRNAs and 273 novel miRNAs were identified. In a differential expression analysis, 26 miRNAs exhibited significant differential expression between WXS (Sterile, S) and WXS (Fertile, F). Some of these miRNAs were validated by quantitative real-time PCR. Among these miRNAs, 11 showed decreased expression levels, and 15 showed increased expression levels in WXS (S) compared to WXS (F). Some of these miRNAs, such as osa-miR156a-j, osa-miR164d, and osa-miR528, were shown to be negatively correlated with their targets. These targets have previously been reported to be related to pollen development and male sterility, suggesting that these miRNAs may be involved in the regulation of pollen development in the rice PTGMS line WXS. Furthermore, miRNA-mediated editing events were also observed. In this study, a possible model for the control of signaling pathways during the process of fertility transition in the rice PTGMS line WXS by miRNAs was developed. These findings contribute to our understanding of the roles of miRNAs during anther development in PTGMS lines in rice.

  14. CONTINUUM INTENSITY AND [O i] SPECTRAL LINE PROFILES IN SOLAR 3D PHOTOSPHERIC MODELS: THE EFFECT OF MAGNETIC FIELDS

    Energy Technology Data Exchange (ETDEWEB)

    Fabbian, D.; Moreno-Insertis, F., E-mail: damian@iac.es, E-mail: fmi@iac.es [Instituto de Astrofísica de Canarias (IAC), E-38205 La Laguna, Tenerife (Spain)

    2015-04-01

    The importance of magnetic fields in three-dimensional (3D) magnetoconvection models of the Sun’s photosphere is investigated in terms of their influence on the continuum intensity at different viewing inclination angles and on the intensity profile of two [O i] spectral lines. We use the RH numerical radiative transfer code to perform a posteriori spectral synthesis on the same time series of magnetoconvection models used in our publications on the effect of magnetic fields on abundance determination. We obtain a good match of the synthetic disk-center continuum intensity to the absolute continuum values from the Fourier Transform Spectrometer (FTS) observational spectrum; the match of the center-to-limb variation synthetic data to observations is also good, thanks, in part, to the 3D radiation transfer capabilities of the RH code. The different levels of magnetic flux in the numerical time series do not modify the quality of the match. Concerning the targeted [O i] spectral lines, we find, instead, that magnetic fields lead to nonnegligible changes in the synthetic spectrum, with larger average magnetic flux causing both of the lines to become noticeably weaker. The photospheric oxygen abundance that one would derive if instead using nonmagnetic numerical models would thus be lower by a few to several centidex. The inclusion of magnetic fields is confirmed to be important for improving the current modeling of the Sun, here in particular in terms of spectral line formation and of deriving consistent chemical abundances. These results may shed further light on the still controversial issue regarding the precise value of the solar oxygen abundance.

  15. Polyphenolic Profile and Targeted Bioactivity of Methanolic Extracts from Mediterranean Ethnomedicinal Plants on Human Cancer Cell Lines

    Directory of Open Access Journals (Sweden)

    Antonino Pollio

    2016-03-01

    Full Text Available The methanol extracts of the aerial part of four ethnomedicinal plants of Mediterranean region, two non-seed vascular plants, Equisetum hyemale L. and Phyllitis scolopendrium (L. Newman, and two Spermatophyta, Juniperus communis L. (J. communis and Cotinus coggygria Scop. (C. coggygria, were screened against four human cells lines (A549, MCF7, TK6 and U937. Only the extracts of J. communis and C. coggygria showed marked cytotoxic effects, affecting both cell morphology and growth. A dose-dependent effect of these two extracts was also observed on the cell cycle distribution. Incubation of all the cell lines in a medium containing J. communis extract determined a remarkable accumulation of cells in the G2/M phase, whereas the C. coggygria extract induced a significant increase in the percentage of G1 cells. The novelty of our findings stands on the observation that the two extracts, consistently, elicited coherent effects on the cell cycle in four cell lines, independently from their phenotype, as two of them have epithelial origin and grow adherent and two are lymphoblastoid and grow in suspension. Even the expression profiles of several proteins regulating cell cycle progression and cell death were affected by both extracts. LC-MS investigation of methanol extract of C. coggygria led to the identification of twelve flavonoids (compounds 1–11, 19 and eight polyphenols derivatives (12–18, 20, while in J. communis extract, eight flavonoids (21–28, a α-ionone glycoside (29 and a lignin (30 were found. Although many of these compounds have interesting individual biological activities, their natural blends seem to exert specific effects on the proliferation of cell lines either growing adherent or in suspension, suggesting potential use in fighting cancer.

  16. Study of the roles of chemical modifiers in determining boron using graphite furnace atomic absorption spectrometry and optimization of the temperature profile during atomization.

    Science.gov (United States)

    Yamamoto, Yuhei; Shirasaki, Toshihiro; Yonetani, Akira; Imai, Shoji

    2015-01-01

    The measurement conditions for determining boron using graphite furnace-atomic absorption spectrometry (GF-AAS) were investigated. Differences in the boron absorbance profiles were found using three different commercially available GF-AAS instruments when the graphite atomizers in them were not tuned. The boron absorbances found with and without adjusting the graphite atomizers suggested that achieving an adequate absorbance for the determination of boron requires a sharp temperature profile that overshoots the target temperature during the atomization process. Chemical modifiers that could improve the boron absorbance without the need for using coating agents were tested. Calcium carbonate improved the boron absorbance but did not suppress variability in the peak height. Improvement of boron absorbance was comparatively less using iron nitrate or copper nitrate than using calcium carbonate, but variability in the peak height was clearly suppressed using iron nitrate or copper nitrate. The limit of detection was 0.0026 mg L(-1) when iron nitrate was used. It appears that iron nitrate is a useful new chemical modifier for the quick and simple determination of boron using GF-AAS.

  17. Molecular portrait of cisplatin induced response in human testis cancer cell lines based on gene expression profiles

    Directory of Open Access Journals (Sweden)

    Soderlund Erik J

    2007-08-01

    Full Text Available Abstract Background Testicular germ cell tumors (TGCTs respond well to cisplatin-based chemotherapy and show a low incidence of acquired resistance compared to most somatic tumors. The reasons for these specific characteristics are not known in detail but seem to be multifactorial. We have studied gene expression profiles of testicular and colon cancer derived cell lines treated with cisplatin. The main goal of this study was to identify novel gene expression profiles with their functional categories and the biochemical pathways that are associated with TGCT cells' response to cisplatin. Results Genes that were differentially expressed between the TGCT cell lines vs the (somatic HCT116 cell line, after cisplatin treatment, were identified using the significance analysis of microarrays (SAM method. The response of TGCT cells was strikingly different from that of HCT116, and we identified 1794 genes that were differentially expressed. Functional classification of these genes showed that they participate in a variety of different and widely distributed functional categories and biochemical pathways. Database mining showed significant association of genes (n = 41 induced by cisplatin in our study, and genes previously reported to by expressed in differentiated TGCT cells. We identified 37 p53-responsive genes that were altered after cisplatin exposure. We also identified 40 target genes for two microRNAs, hsa-mir-372 and 373 that may interfere with p53 signaling in TGCTs. The tumor suppressor genes NEO1 and LATS2, and the estrogen receptor gene ESR1, all have binding sites for p53 and hsa-mir-372/373. NEO1 and LATS2 were down-regulated in TGCT cells following cisplatin exposure, while ESR1 was up-regulated in TGCT cells. Cisplatin-induced genes associated with terminal growth arrest through senescence were identified, indicating associations which were not previously described for TGCT cells. Conclusion By linking our gene expression data to

  18. Line-profile tomography of exoplanet transits - II. A gas-giant planet transiting a rapidly rotating A5 star

    Science.gov (United States)

    Collier Cameron, A.; Guenther, E.; Smalley, B.; McDonald, I.; Hebb, L.; Andersen, J.; Augusteijn, Th.; Barros, S. C. C.; Brown, D. J. A.; Cochran, W. D.; Endl, M.; Fossey, S. J.; Hartmann, M.; Maxted, P. F. L.; Pollacco, D.; Skillen, I.; Telting, J.; Waldmann, I. P.; West, R. G.

    2010-09-01

    Most of our knowledge of extrasolar planets rests on precise radial-velocity measurements, either for direct detection or for confirmation of the planetary origin of photometric transit signals. This has limited our exploration of the parameter space of exoplanet hosts to solar- and later-type, sharp-lined stars. Here we extend the realm of stars with known planetary companions to include hot, fast-rotating stars. Planet-like transits have previously been reported in the light curve obtained by the SuperWASP survey of the A5 star HD15082 (WASP-33 V = 8.3, v sini = 86 km s-1). Here we report further photometry and time-series spectroscopy through three separate transits, which we use to confirm the existence of a gas-giant planet with an orbital period of 1.22d in orbit around HD15082. From the photometry and the properties of the planet signal travelling through the spectral line profiles during the transit, we directly derive the size of the planet, the inclination and obliquity of its orbital plane and its retrograde orbital motion relative to the spin of the star. This kind of analysis opens the way to studying the formation of planets around a whole new class of young, early-type stars, hence under different physical conditions and generally in an earlier stage of formation than in sharp-lined late-type stars. The reflex orbital motion of the star caused by the transiting planet is small, yielding an upper mass limit of 4.1MJupiter on the planet. We also find evidence of a third body of substellar mass in the system, which may explain the unusual orbit of the transiting planet. In HD 15082, the stellar line profiles also show evidence of non-radial pulsations, clearly distinct from the planetary transit signal. This raises the intriguing possibility that tides raised by the close-in planet may excite or amplify the pulsations in such stars. Based on observations at Tautenburg Observatory, McDonald Observatory and the Nordic Optical Telescope. E-mail: acc4@st-and.ac.uk

  19. Analysis of miRNA expression profiles in melatonin-exposed GC-1 spg cell line.

    Science.gov (United States)

    Zhu, Xiaoling; Chen, Shuxiong; Jiang, Yanwen; Xu, Ying; Zhao, Yun; Chen, Lu; Li, Chunjin; Zhou, Xu

    2018-02-05

    Melatonin is an endocrine neurohormone secreted by pinealocytes in the pineal gland. It exerts diverse physiological effects, such as circadian rhythm regulator and antioxidant. However, the functional importance of melatonin in spermatogenesis regulation remains unclear. The objectives of this study are to: (1) detect melatonin affection on miRNA expression profiles in GC-1 spg cells by miRNA deep sequencing (DeepSeq) and (2) define melatonin affected miRNA-mRNA interactions and associated biological processes using bioinformatics analysis. GC-1 spg cells were cultured with melatonin (10 -7 M) for 24h. DeepSeq data were validated using quantitative real-time reverse transcription polymerase chain reaction analysis (qRT-PCR). A total of 176 miRNA expressions were found to be significantly different between two groups (fold change of >2 or melatonin could regulate the expression of miRNA to perform its physiological effects in GC-1 spg cells. These results should be useful to investigate the biological function of miRNAs regulated by melatonin in spermatogenesis and testicular germ cell tumor. Copyright © 2017 Elsevier B.V. All rights reserved.

  20. Determination of dislocation density by electron backscatter diffraction and X-ray line profile analysis in ferrous lath martensite

    International Nuclear Information System (INIS)

    Berecz, Tibor; Jenei, Péter; Csóré, András; Lábár, János; Gubicza, Jenő

    2016-01-01

    The microstructure and the dislocation density in as-quenched ferrous lath martensite were studied by different methods. The blocks, packets and variants formed due to martensitic transformation were identified and their sizes were determined by electron backscatter diffraction (EBSD). Concomitant transmission electron microscopy (TEM) investigation revealed that the laths contain subgrains with the size between 50 and 100 nm. A novel evaluation procedure of EBSD images was elaborated for the determination of the density and the space distribution of geometrically necessary dislocations from the misorientation distribution. The total dislocation density obtained by X-ray diffraction line profile analysis was in good agreement with the value determined by EBSD, indicating that the majority of dislocations formed due to martensitic transformation during quenching are geometrically necessary dislocations.

  1. Multiplex flow cytometry barcoding and antibody arrays identify surface antigen profiles of primary and metastatic colon cancer cell lines.

    Directory of Open Access Journals (Sweden)

    Kumar Sukhdeo

    Full Text Available Colon cancer is a deadly disease affecting millions of people worldwide. Current treatment challenges include management of disease burden as well as improvements in detection and targeting of tumor cells. To identify disease state-specific surface antigen signatures, we combined fluorescent cell barcoding with high-throughput flow cytometric profiling of primary and metastatic colon cancer lines (SW480, SW620, and HCT116. Our multiplexed technique offers improvements over conventional methods by permitting the simultaneous and rapid screening of cancer cells with reduced effort and cost. The method uses a protein-level analysis with commercially available antibodies on live cells with intact epitopes to detect potential tumor-specific targets that can be further investigated for their clinical utility. Multiplexed antibody arrays can easily be applied to other tumor types or pathologies for discovery-based approaches to target identification.

  2. Profiles

    International Nuclear Information System (INIS)

    2004-01-01

    Profiles is a synthetic overview of more than 100 national energy markets in the world, providing insightful facts and key energy statistics. A Profile is structured around 6 main items and completed by key statistics: Ministries, public agencies, energy policy are concerned; main companies in the oil, gas, electricity and coal sectors, status, shareholders; reserve, production, imports and exports, electricity and refining capacities; deregulation of prices, subsidies, taxes; consumption trends by sector, energy market shares; main energy projects, production and consumption prospects. Statistical Profiles are present in about 3 pages the main data and indicators on oil, gas, coal and electricity. (A.L.B.)

  3. Proteomic profiling of a robust Wolbachia infection in an Aedes albopictus mosquito cell line.

    Science.gov (United States)

    Baldridge, Gerald D; Baldridge, Abigail S; Witthuhn, Bruce A; Higgins, LeeAnn; Markowski, Todd W; Fallon, Ann M

    2014-11-01

    Wolbachia pipientis, a widespread vertically transmitted intracellular bacterium, provides a tool for insect control through manipulation of host-microbe interactions. We report proteomic characterization of wStr, a Wolbachia strain associated with a strong cytoplasmic incompatibility phenotype in its native host, Laodelphax striatellus. In the Aedes albopictus C/wStr1 mosquito cell line, wStr maintains a robust, persistent infection. MS/MS analyses of gel bands revealed a protein 'footprint' dominated by Wolbachia-encoded chaperones, stress response and cell membrane proteins, including the surface antigen WspA, a peptidoglycan-associated lipoprotein and a 73 kDa outer membrane protein. Functional classifications and estimated abundance levels of 790 identified proteins suggested that expression, stabilization and secretion of proteins predominate over bacterial genome replication and cell division. High relative abundances of cysteine desulphurase, serine/glycine hydroxymethyl transferase, and components of the α-ketoglutarate dehydrogenase complex in conjunction with above average abundances of glutamate dehydrogenase and proline utilization protein A support Wolbachia genome-based predictions for amino acid metabolism as a primary energy source. wStr expresses 15 Vir proteins of a Type IV secretion system and its transcriptional regulator. Proteomic characterization of a robust insect-associated Wolbachia strain provides baseline information that will inform further development of in vitro protocols for Wolbachia manipulation. © 2014 John Wiley & Sons Ltd.

  4. [Influence of hepatocyte cell adhesion molecule on gene expression profile of human bladder transitional cell carcinoma cell line].

    Science.gov (United States)

    Wang, Qiu-ju; Lv, Chang-kun; Tao, Jia; Du, Hong-fei; Fan, Yan-ru; Song, Xue-dong; Luo, Chun-li

    2013-04-01

    To investigate the changes of gene expression file in transitional cell carcinoma of bladder after hepatocyte cell adhesion molecule(hepaCAM) overexpression. Affymetrix Human Genome U133 Plus 2.0 Array was used to investigate the changes of gene expression profile between adenovirus-green fluorescent protein(GFP) -hepaCAM group and GFP group in transitional cell carcinoma of bladder EJ cells.Significant Analysis of Microarray(SAM) was used to screen the differentially expressed genes, DAVID software was used to conduct gene ontology analysis and wikiPathway analysis based on the differentially expressed genes. Reverse transcription-polymerase chain reaction and Western blot were applied to verify microarray data. Compared with the GFP group, a total of 2469 genes were up-regulated or down-regulated by more than 2 times in the GFP-hepaCAM group. Among these genes, 1602 genes were up-regulated and 867 were down-regulated.Most of the differentially expressed genes were involved in the function of cell proliferation and cell cycle regulation. The mRNA expressions of nibrin, liver kinase B1, and cyclin D1 detected by reverse transcription-polymerase chain reaction in three different bladder cancer cell lines were consistent with the microarray data.The protein expressions of nibrin and liver kinase B1 in these three cell lines measured by Western blot were consistent with the mRNA expression. HepaCAM can alter the gene expression profile of bladder cancer EJ cells. The well-known anti-tumor effect of hepaCAM may be mediated by regulating the gene expression via multiple pathways.

  5. IDENTIFIKASI PROFIL DASAR LAUT MENGGUNAKAN INSTRUMEN SIDE SCAN SONAR DENGAN METODE BEAM PATTERN DISCRETE-EQUI-SPACED UNSHADED LINE ARRAY

    Directory of Open Access Journals (Sweden)

    Muhammad Zainuddin Lubis

    2017-05-01

    Full Text Available Laut Punggur merupakan laut yang terletak di Batam, Kepulauan Riau yang mempunyai beragam habitat objek,dan bentuk struktur bawah laut yang memiliki dinamika laut yang sangat tinggi. Side scan sonar (SSS merupakan instrumen pengembangan sistem sonar yang mampu menunjukkan dalam gambar dua dimensional permukaan dasar laut dengan kondisi kontur, topografi, dan target secara bersamaan. Metode Beam Pattern Discrete-Equi-Spaced Unshaded Line Array digunakan untuk menghitung beam pattern dua dimensi yang tergantung pada sudut dari gelombang suara yang masuk dari sumbu array yang diterima tergantung pada sudut di mana sinar suara pada array. Penelitian ini dilakukan pada Desember 2016 di laut Punggur,Batam, Kepulauan Riau-Indonesia, dengan koordinat 104 ° 08,7102 E dan 1° 03,2448 N sampai 1 ° 03.3977 N dan 104 ° 08,8133 E, menggunakan instrumen Side Scan Sonar C-Max CM2 Tow fish dengan frekuensi 325 kHz. Hasil yang diperoleh dari perekaman terdapat 7 target, dan Beam pattern dari metode Beam Discrete-Equi-Spaced Unshaded Line Array target 4 memiliki nilai tertinggi pada directivity Pattern yaitu 21.08 dB. Hasil model beam pattern ini memiliki nilai pusat pada incidence angle (o terhadap Directivity pattern (dB tidak berada di nilai 0 ataupun pada pusat beam pattern yang dihasilkan pada target 6 dengan nilai incident angle -1.5 o dan 1.5o mengalami penurunan hingga -40 dB. Karakteristik sedimen dasar perairan di laut punggur ditemukan lebih banyak pasir. Hasil metode Beam Discrete-Equi-Spaced Unshaded Line Array ditemukan bangkai kapal tenggelam.Kata Kunci: Side Scan Sonar, Beam Pattern Discrete-Equi-Spaced Unshaded Line Array, Incidence angle, Directivity pattern IDENTIFICATION OF SEABED PROFILE USING SIDE SCAN SONAR INSTRUMENT WITH PATTERN DISCRETE-EQUI-SPACED UNSHADED LINE ARRAY METHODRiau Islands is an island that has a variety of habitat objects, and forms of submarine structures that have a very high ocean dynamics, Punggur Sea is the sea

  6. Induced Mutagenesis in UGT74S1 Gene Leads to Stable New Flax Lines with Altered Secoisolariciresinol Diglucoside (SDG Profiles

    Directory of Open Access Journals (Sweden)

    Bourlaye Fofana

    2017-09-01

    Full Text Available Flax secoisolariciresinol (SECO diglucoside (SDG lignan is an emerging natural product purported to prevent chronic diseases in humans. SECO, the aglycone form of SDG, has shown higher intestinal cell absorption but it is not accumulated naturally in planta. Recently, we have identified and characterized a UDP-glucosyltransferase gene, UGT74S1, that glucosylates SECO into its monoglucoside (SMG and SDG forms when expressed in yeast. However, whether this gene is unique in controlling SECO glucosylation into SDG in planta is unclear. Here, we report on the use of UGT74S1 in reverse and forward genetics to characterize an ethyl methane sulfonate (EMS mutagenized flax population from cultivar CDC Bethune and consisting of 1996 M2 families. EMS mutagenesis generated 73 SNP variants causing 79 mutational events in the UGT74S1 exonic regions of 93 M2 families. The mutation frequency in the exonic regions was determined to be one per 28 Kb. Of these mutations, 13 homozygous missense mutations and two homozygous nonsense mutations were observed and all were transmitted into the M3 and M4 generations. Forward genetics screening of the population showed homozygous nonsense mutants completely lacking SDG biosynthesis while the production of SMG was observed only in a subset of the M4 lines. Heterozygous or homozygous M4 missense mutants displayed a wide range of SDG levels, some being greater than those of CDC Bethune. No additional deleterious mutations were detected in these mutant lines using a panel of 10 other genes potentially involved in the lignan biosynthesis. This study provides further evidence that UGT74S1 is unique in controlling SDG formation from SECO and this is the first report of non-transgenic flax germplasm with simultaneous knockout of SDG and presence of SMG in planta.

  7. Cytokine profiling of MCF-7 cell line 2D, progressive 3D, and 3D revert cultures.

    Science.gov (United States)

    Subramaniyan, Aishwarya; Maddaly, Ravi

    2018-02-01

    Cancer cytokines are known to mediate several complex cancer cell physiologies. Also, cancer cells themselves are known to secrete cytokines whose expressions and net inducible results are controlled by a variety of factors. We profiled a few cytokines secreted by 2D, 3D aggregates, and the 3DRs of MCF-7 cell line at various time points. Several cytokines were seen more expressed by 3D cultures on the 4th day and IL-10 peaked on the day 1 of 3D cultures while TNF-α level peaked on the 7th day. α-Defensin, SDF-7, and TGF-β also showed markedly higher levels. There was a reduced expression of IL-6 and IL-17 by the 3DRs. TGF-β did not show much change among the 2D, progressive 3D, and 3DR cultures. Utilizing 3DRs as study material will be a significant extension of the ways cells lines can be used for research. © 2017 Wiley Periodicals, Inc.

  8. Small RNA profiles of the rice PTGMS line Wuxiang S reveal miRNAs involved in the fertility transition

    Directory of Open Access Journals (Sweden)

    Yi eDing

    2016-04-01

    Full Text Available MicroRNAs (miRNAs play key roles in the regulation of plant growth and developmental processes. In this study, the RNA-seq technique was employed to examine the expression profiles of miRNAs in a novel rice photo-thermo sensitive generic male sterile (PTGMS line Wuxiang S (WXS during the fertility transition. A total of 497 known miRNAs and 273 novel miRNAs were identified. By means of the differentially expression analysis, a total of 26 miRNAs were discovered to be significant difference expression between WXS (Sterility, S and WXS (Fertility, F. And some of these miRNAs were validated by quantitative real-time PCR. Among these miRNAs, eleven of which were decreased, and fifteen of which were increased in the expression levels of genes when WXS (S compared with WXS (F, respectively. Some of these miRNAs such as osa-miR156a-j, osa-miR164d and osa-miR528, were showed to be negatively correlated with their targets. These targets have previously been reported to be related with pollen development and male sterility, suggesting that these miRNAs might be involved in the regulation of pollen development in the rice PTGMS line WXS. Furthermore, the miRNAs editing events were also observed. A possible control model of miRNAs and signaling pathway was proposed in the process of fertility transition of rice PTGMS line WXS in this study. These findings contribute to our understanding of the roles of miRNAs during anther development of PTGMS occurrence in rice.

  9. Metabolic Profile of Oral Squamous Carcinoma Cell Lines Relies on a Higher Demand of Lipid Metabolism in Metastatic Cells

    Directory of Open Access Journals (Sweden)

    Ana Carolina B. Sant’Anna-Silva

    2018-02-01

    Full Text Available Tumor cells are subjected to a broad range of selective pressures. As a result of the imposed stress, subpopulations of surviving cells exhibit individual biochemical phenotypes that reflect metabolic reprograming. The present work aimed at investigating metabolic parameters of cells displaying increasing degrees of metastatic potential. The metabolites present in cell extracts fraction of tongue fibroblasts and of cell lines derived from human tongue squamous cell carcinoma lineages displaying increasing metastatic potential (SCC9 ZsG, LN1 and LN2 were analyzed by 1H NMR (nuclear magnetic resonance spectroscopy. Living, intact cells were also examined by the non-invasive method of fluorescence lifetime imaging microscopy (FLIM based on the auto fluorescence of endogenous NADH. The cell lines reproducibly exhibited distinct metabolic profiles confirmed by Partial Least-Square Discriminant Analysis (PLS-DA of the spectra. Measurement of endogenous free and bound NAD(PH relative concentrations in the intact cell lines showed that ZsG and LN1 cells displayed high heterogeneity in the energy metabolism, indicating that the cells would oscillate between glycolysis and oxidative metabolism depending on the microenvironment’s composition. However, LN2 cells appeared to have more contributions to the oxidative status, displaying a lower NAD(PH free/bound ratio. Functional experiments of energy metabolism, mitochondrial physiology, and proliferation assays revealed that all lineages exhibited similar energy features, although resorting to different bioenergetics strategies to face metabolic demands. These differentiated functions may also promote metastasis. We propose that lipid metabolism is related to the increased invasiveness as a result of the accumulation of malonate, methyl malonic acid, n-acetyl and unsaturated fatty acids (CH2n in parallel with the metastatic potential progression, thus suggesting that the NAD(PH reflected the lipid catabolic

  10. MULTIMAGNON ABSORPTION IN MNF2-OPTICAL ABSORPTION SPECTRUM.

    Science.gov (United States)

    The absorption spectrum of MnF2 at 4.2K in the 3900A region was measured in zero external fields and in high fields. Exciton lines with magnon ...sidebands are observed, accompanied by a large number of weak satellite lines. Results on the exciton and magnon absorptions are similar to those of...McClure et al. The satellite lines are interpreted as being multi- magnon absorptions, and it is possible to fit the energy of all the absorptions with

  11. Partial dust obscuration in active galactic nuclei as a cause of broad-line profile and lag variability, and apparent accretion disc inhomogeneities

    Science.gov (United States)

    Gaskell, C. Martin; Harrington, Peter Z.

    2018-04-01

    The profiles of the broad emission lines of active galactic nuclei (AGNs) and the time delays in their response to changes in the ionizing continuum ("lags") give information about the structure and kinematics of the inner regions of AGNs. Line profiles are also our main way of estimating the masses of the supermassive black holes (SMBHs). However, the profiles often show ill-understood, asymmetric structure and velocity-dependent lags vary with time. Here we show that partial obscuration of the broad-line region (BLR) by outflowing, compact, dusty clumps produces asymmetries and velocity-dependent lags similar to those observed. Our model explains previously inexplicable changes in the ratios of the hydrogen lines with time and velocity, the lack of correlation of changes in line profiles with variability of the central engine, the velocity dependence of lags, and the change of lags with time. We propose that changes on timescales longer than the light-crossing time do not come from dynamical changes in the BLR, but are a natural result of the effect of outflowing dusty clumps driven by radiation pressure acting on the dust. The motion of these clumps offers an explanation of long-term changes in polarization. The effects of the dust complicate the study of the structure and kinematics of the BLR and the search for sub-parsec SMBH binaries. Partial obscuration of the accretion disc can also provide the local fluctuations in luminosity that can explain sizes deduced from microlensing.

  12. Determination of As(III) and total inorganic As in water samples using an on-line solid phase extraction and flow injection hydride generation atomic absorption spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Sigrist, Mirna, E-mail: msigrist@fiq.unl.edu.ar [Laboratorio Central, Facultad de Ingenieria Quimica, Universidad Nacional del Litoral, Santiago del Estero 2654-Piso 6, (3000) Santa Fe (Argentina); Albertengo, Antonela; Beldomenico, Horacio [Laboratorio Central, Facultad de Ingenieria Quimica, Universidad Nacional del Litoral, Santiago del Estero 2654-Piso 6, (3000) Santa Fe (Argentina); Tudino, Mabel [Laboratorio de Analisis de Trazas, Departamento de Quimica Inorganica, Analitica y Quimica Fisica/INQUIMAE, Facultad de Ciencias Exactas y Naturales, Pabellon II, Ciudad Universitaria (1428), Buenos Aires (Argentina)

    2011-04-15

    A simple and robust on-line sequential injection system based on solid phase extraction (SPE) coupled to a flow injection hydride generation atomic absorption spectrometer (FI-HGAAS) with a heated quartz tube atomizer (QTA) was developed and optimized for the determination of As(III) in groundwater without any kind of sample pretreatment. The method was based on the selective retention of inorganic As(V) that was carried out by passing the filtered original sample through a cartridge containing a chloride-form strong anion exchanger. Thus the most toxic form, inorganic As(III), was determined fast and directly by AsH{sub 3} generation using 3.5 mol L{sup -1} HCl as carrier solution and 0.35% (m/v) NaBH{sub 4} in 0.025% NaOH as the reductant. Since the uptake of As(V) should be interfered by several anions of natural occurrence in waters, the effect of Cl{sup -}, SO{sub 4}{sup 2-}, NO{sub 3}{sup -}, HPO{sub 4}{sup 2-}, HCO{sub 3}{sup -} on retention was evaluated and discussed. The total soluble inorganic arsenic concentration was determined on aliquots of filtered samples acidified with concentrated HCl and pre-reduced with 5% KI-5% C{sub 6}H{sub 8}O{sub 6} solution. The concentration of As(V) was calculated by difference between the total soluble inorganic arsenic and As(III) concentrations. Detection limits (LODs) of 0.5 {mu}g L{sup -1} and 0.6 {mu}g L{sup -1} for As(III) and inorganic total As, respectively, were obtained for a 500 {mu}L sample volume. The obtained limits of detection allowed testing the water quality according to the national and international regulations. The analytical recovery for water samples spiked with As(III) ranged between 98% and 106%. The sampling throughput for As(III) determination was 60 samples h{sup -1}. The device for groundwater sampling was especially designed for the authors. Metallic components were avoided and the contact between the sample and the atmospheric oxygen was carried to a minimum. On-field arsenic species

  13. Determination of As(III) and total inorganic As in water samples using an on-line solid phase extraction and flow injection hydride generation atomic absorption spectrometry

    International Nuclear Information System (INIS)

    Sigrist, Mirna; Albertengo, Antonela; Beldomenico, Horacio; Tudino, Mabel

    2011-01-01

    A simple and robust on-line sequential injection system based on solid phase extraction (SPE) coupled to a flow injection hydride generation atomic absorption spectrometer (FI-HGAAS) with a heated quartz tube atomizer (QTA) was developed and optimized for the determination of As(III) in groundwater without any kind of sample pretreatment. The method was based on the selective retention of inorganic As(V) that was carried out by passing the filtered original sample through a cartridge containing a chloride-form strong anion exchanger. Thus the most toxic form, inorganic As(III), was determined fast and directly by AsH 3 generation using 3.5 mol L -1 HCl as carrier solution and 0.35% (m/v) NaBH 4 in 0.025% NaOH as the reductant. Since the uptake of As(V) should be interfered by several anions of natural occurrence in waters, the effect of Cl - , SO 4 2- , NO 3 - , HPO 4 2- , HCO 3 - on retention was evaluated and discussed. The total soluble inorganic arsenic concentration was determined on aliquots of filtered samples acidified with concentrated HCl and pre-reduced with 5% KI-5% C 6 H 8 O 6 solution. The concentration of As(V) was calculated by difference between the total soluble inorganic arsenic and As(III) concentrations. Detection limits (LODs) of 0.5 μg L -1 and 0.6 μg L -1 for As(III) and inorganic total As, respectively, were obtained for a 500 μL sample volume. The obtained limits of detection allowed testing the water quality according to the national and international regulations. The analytical recovery for water samples spiked with As(III) ranged between 98% and 106%. The sampling throughput for As(III) determination was 60 samples h -1 . The device for groundwater sampling was especially designed for the authors. Metallic components were avoided and the contact between the sample and the atmospheric oxygen was carried to a minimum. On-field arsenic species separation was performed through the employ of a serial connection of membrane filters and

  14. Fugitive coke oven gas emission profile by continuous line averaged open-path Fourier transform infrared monitoring.

    Science.gov (United States)

    Lin, Chitsan; Liou, Naiwei; Chang, Pao-Erh; Yang, Jen-Chin; Sun, Endy

    2007-04-01

    Although most coke oven research is focused on the emission of polycyclic aromatic hydrocarbons, well-known carcinogens, little has been done on the emission of volatile organic compounds, some of which are also thought to be hazardous to workers and the environment. To profile coke oven gas (COG) emissions, we set up an open-path Fourier transform infrared (OP-FTIR) system on top of a battery of coke ovens at a steel mill located in Southern Taiwan and monitored average emissions in a coke processing area for 16.5 hr. Nine COGs were identified, including ammonia, CO, methane, ethane, ethylene, acetylene, propylene, cyclohexane, and O-xylene. Time series plots indicated that the type of pollutants differed over time, suggesting that different emission sources (e.g., coke pushing, quench tower, etc.) were involved at different times over the study period. This observation was confirmed by the low cross-correlation coefficients of the COGs. It was also found that, with the help of meteorological analysis, the data collected by the OP-FTIR system could be analyzed effectively to characterize differences in the location of sources. Although the traditional single-point samplings of emissions involves sampling various sources in a coke processing area at several different times and is a credible profiling of emissions, our findings strongly suggest that they are not nearly as efficient or as cost-effective as the continuous line average method used in this study. This method would make it easier and cheaper for engineers and health risk assessors to identify and to control fugitive volatile organic compound emissions and to improve environmental health.

  15. Gene expression profile in response to doxorubicin-rapamycin combined treatment of HER-2-overexpressing human mammary epithelial cell lines.

    Science.gov (United States)

    Trapé, Adriana Priscila; Katayama, Maria Lucia Hirata; Roela, Rosimeire Aparecida; Brentani, Helena; Ravacci, Graziela Rosa; de Araujo Lima, Leandro; Brentani, Maria Mitzi

    2012-02-01

    HER-2-positive breast cancers frequently sustain elevated AKT/mTOR signaling, which has been associated with resistance to doxorubicin treatment. Here, we investigated whether rapamycin, an mTOR inhibitor, increased the sensitivity to doxorubicin therapy in two HER-2-overexpressing cell lines: C5.2, which was derived from the parental HB4a by transfection with HER-2 and SKBR3, which exhibits HER-2 amplification. The epithelial mammary cell line HB4a was also analyzed. The combined treatment using 20 nmol/L of rapamycin and 30 nmol/L of doxorubicin arrested HB4a and C5.2 cells in S to G(2)-M, whereas SKBR3 cells showed an increase in the G(0)-G(1) phase. Rapamycin increased the sensitivity to doxorubicin in HER-2-overexpressing cells by approximately 2-fold, suggesting that the combination displayed a more effective antiproliferative action. Gene expression profiling showed that these results might reflect alterations in genes involved in canonical pathways related to purine metabolism, oxidative phosphorylation, protein ubiquitination, and mitochondrial dysfunction. A set of 122 genes modulated by the combined treatment and specifically related to HER-2 overexpression was determined by finding genes commonly regulated in both C5.2 and SKBR3 that were not affected in HB4a cells. Network analysis of this particular set showed a smaller subgroup of genes in which coexpression pattern in HB4a cells was disrupted in C5.2 and SKBR3. Altogether, our data showed a subset of genes that might be more robust than individual markers in predicting the response of HER-2-overexpressing breast cancers to doxorubicin and rapamycin combination.

  16. Cotton fiber elongation network revealed by expression profiling of longer fiber lines introgressed with different Gossypium barbadense chromosome segments.

    Science.gov (United States)

    Fang, Lei; Tian, Ruiping; Li, Xinghe; Chen, Jiedan; Wang, Sen; Wang, Peng; Zhang, Tianzhen

    2014-10-02

    Cotton fiber, a highly elongated, thickened single cell of the seed epidermis, is a powerful cell wall research model. Fiber length, largely determined during the elongation stage, is a key property of fiber quality. Several studies using expressed sequence tags and microarray analysis have identified transcripts that accumulate preferentially during fiber elongation. To further show the mechanism of fiber elongation, we used Digital Gene Expression Tag Profiling to compare transcriptome data from longer fiber chromosome introgressed lines (CSILs) containing segments of various Gossypium barbadense chromosomes with data from its recurrent parent TM-1 during fiber elongation (from 5 DPA to 20 DPA). A large number of differentially expressed genes (DEGs) involved in carbohydrate, fatty acid and secondary metabolism, particularly cell wall biosynthesis, were highly upregulated during the fiber elongation stage, as determined by functional enrichment and pathway analysis. Furthermore, DEGs related to hormone responses and transcription factors showed upregulated expression levels in the CSILs. Moreover, metabolic and regulatory network analysis indicated that the same pathways were differentially altered, and distinct pathways exhibited altered gene expression, in the CSILs. Interestingly, mining of upregulated DEGs in the introgressed segments of these CSILs based on D-genome sequence data showed that these lines were enriched in glucuronosyltransferase, inositol-1, 4, 5-trisphosphate 3-kinase and desulfoglucosinolate sulfotransferase activity. These results were similar to the results of transcriptome analysis. This report provides an integrative network about the molecular mechanisms controlling fiber length, which are mainly tied to carbohydrate metabolism, cell wall biosynthesis, fatty acid metabolism, secondary metabolism, hormone responses and Transcription factors. The results of this study provide new insights into the critical factors associated with cell

  17. The consequences of chromosomal aneuploidy on gene expression profiles in a cell line model for prostate carcinogenesis.

    Science.gov (United States)

    Phillips, J L; Hayward, S W; Wang, Y; Vasselli, J; Pavlovich, C; Padilla-Nash, H; Pezullo, J R; Ghadimi, B M; Grossfeld, G D; Rivera, A; Linehan, W M; Cunha, G R; Ried, T

    2001-11-15

    Here we report the genetic characterization of immortalized prostate epithelial cells before and after conversion to tumorigenicity using molecular cytogenetics and microarray technology. We were particularly interested to analyze the consequences of acquired chromosomal aneuploidies with respect to modifications of gene expression profiles. Compared with nontumorigenic but immortalized prostate epithelium, prostate tumor cell lines showed high levels of chromosomal rearrangements that led to gains of 1p, 5, 11q, 12p, 16q, and 20q and losses of 1pter, 11p, 17, 20p, 21, 22, and Y. Of 5700 unique targets on a 6.5K cDNA microarray, approximately 3% were subject to modification in expression levels; these included GRO-1, -2, IAP-1,- 2, MMP-9, and cyclin D1, which showed increased expression, and TRAIL, BRCA1, and CTNNA, which showed decreased expression. Thirty % of expression changes occurred in regions the genomic copy number of which remained balanced. Of the remainder, 42% of down-regulated and 51% of up-regulated genes mapped to regions present in decreased or increased genomic copy numbers, respectively. A relative gain or loss of a chromosome or chromosomal arm usually resulted in a statistically significant increase or decrease, respectively, in the average expression level of all of the genes on the chromosome. However, of these genes, very few (e.g., 5 of 101 genes on chromosome 11q), and in some instances only two genes (MMP-9 and PROCR on chromosome 20q), were overexpressed by > or =1.7-fold when scored individually. Cluster analysis by gene function suggests that prostate tumorigenesis in these cell line models involves alterations in gene expression that may favor invasion, prevent apoptosis, and promote growth.

  18. Quality properties and expression profiling of protein disulfide isomerase genes during grain development of three spring wheat near isogenic lines

    Directory of Open Access Journals (Sweden)

    Dong Liwei

    2016-01-01

    Full Text Available Three wheat glutenin near isogenic lines (NILs CB037A, CB037B and CB037C were used to investigate their quality properties and the transcriptional expression profiles of PDI gene family during grain development. Our purpose is to understand the relationships between the dynamic expression of different PDI genes and glutenin allelic compositions related to gluten quality. The results showed that glutenin allelic variations had no significant effects on main agronomic traits and yield performance, but resulted in clear gluten quality changes. CB037B with 5+10 subunits had higher glutenin macropolymer (GMP content and better breadmaking quality than CB037A with 2+12 while the lack of Glu-B3h encoding one abundant B-subunit in CB037C significantly reduced GMP content, dough strength and breadmaking quality. The dynamic expression patterns of eight protein disulfide isomerase (PDI genes during grain development detected by quantitative real-time polymerase chain reaction (qRT-PCR showed the close correlations between higher expression levels of PDI3-1, PDI5-1 and PDI8-1 and the presence of 5+10 subunits. Meanwhile, Glu-B3h silence resulted in significant decrease of expression levels of five PDI genes (PDI3-1, PDI5-1, PDI6-1, PDI7-2 and PDI8-1, suggesting the vital roles of certain PDI genes in glutenin and GMP synthesis and gluten quality formation.

  19. Transcriptome Profiling of Caco-2 Cancer Cell Line following Treatment with Extracts from Iodine-Biofortified Lettuce (Lactuca sativa L..

    Directory of Open Access Journals (Sweden)

    Aneta A Koronowicz

    Full Text Available Although iodization of salt is the most common method used to obtain iodine-enriched food, iodine deficiency disorders are still a global health problem and profoundly affect the quality of human life. Iodine is required for the synthesis of thyroid hormones, which are crucial regulators of human metabolism, cell growth, proliferation, apoptosis and have been reported to be involved in carcinogenesis. In this study, for the first time, we evaluated the effect of iodine-biofortified lettuce on transcriptomic profile of Caco-2 cancer cell line by applying the Whole Human Genome Microarray assay. We showed 1326 differentially expressed Caco-2 transcripts after treatment with iodine-biofortified (BFL and non-fortified (NFL lettuce extracts. We analysed pathways, molecular functions, biological processes and protein classes based on comparison between BFL and NFL specific genes. Iodine, which was expected to act as a free ion (KI-NFL or at least in part to be incorporated into lettuce macromolecules (BFL, differently regulated pathways of numerous transcription factors leading to different cellular effects. In this study we showed the inhibition of Caco-2 cells proliferation after treatment with BFL, but not potassium iodide (KI, and BFL-mediated induction of mitochondrial apoptosis and/or cell differentiation. Our results showed that iodine-biofortified plants can be effectively used by cells as an alternative source of this trace element. Moreover, the observed differences in action of both iodine sources may suggest a potential of BFL in cancer treatment.

  20. Alterations to the protein profile of bladder carcinoma cell lines induced by plant extract MINA-05 in vitro.

    Science.gov (United States)

    Nguyen-Khuong, Terry; White, Melanie Y; Hung, Tzong-Tyng; Seeto, Shona; Thomas, Melissa L; Fitzgerald, Anna M; Martucci, Carlos E; Luk, Sharon; Pang, Shiu-Fu; Russell, Pamela J; Walsh, Bradley J

    2009-04-01

    Bladder cancer (BLCa) is a severe urological cancer of both men and women that commonly recurs and once invasive, is difficult to treat. MINA-05 (CK Life Sciences Int'l, Hong Kong) is a derivative of complex botanical extracts, shown to reduce cellular proliferation of bladder and prostate carcinomas. We tested the effects of MINA-05 against human BLCa cell sublines, B8, B8-RSP-GCK, B8-RSP-LN and C3, from a transitional cell carcinoma, grade IV, to determine the molecular targets of treatment by observing the cellular protein profile. Cells were acclimatised for 48 h then treated for 72 h with concentrations of MINA-05 reflecting 1/2 IC(50), IC(50) and 2 x IC(50) (n = 3) or with vehicle, (0.5% DMSO). Dose-dependant changes in protein abundance were detected and characterised using 2-dimensional electrophoresis and MS. We identified 10 proteins that underwent changes in abundance, pI and/or molecular mass in response to treatment. MINA-05 was shown to influence proteins across numerous functional classes including cytoskeletal proteins, energy metabolism proteins, protein degradation proteins and tumour suppressors, suggesting a global impact on these cell lines. This study implies that the ability of MINA-05 to retard cellular proliferation is attributed to its ability to alter cell cycling, metabolism, protein degradation and the cancer cell environment.

  1. Water vapor spectroscopy in the 815-nm wavelength region for Differential Absorption Lidar measurements

    Science.gov (United States)

    Ponsardin, Patrick; Browell, Edward V.

    1995-01-01

    The differential absorption lidar (DIAL) technique was first applied to the remote measurement of atmospheric water vapor profiles from airborne platforms in 1981. The successful interpretation of the lidar profiles relies strongly on an accurate knowledge of specific water vapor absorption line parameters: line strength, pressure broadening coefficient, pressure-induced shift coefficient and the respective temperature-dependence factors. NASA Langley Research Center has developed and is currently testing an autonomous airborne water vapor lidar system: LASE (Lidar Atmospheric Sensing Experiment). This DIAL system uses a Nd:YAG-pumped Ti:Sapphire laser seeded by a diode laser as a lidar transmitter. The tunable diode has been selected to operate in the 813-818 nm wavelength region. This 5-nm spectral interval offers a large distribution of strengths for temperature-insensitive water vapor absorption lines. In support of the LASE project, a series of spectroscopic measurements were conducted for the 16 absorption lines that have been identified for use in the LASE measurements. Prior to this work, the experimental data for this water vapor absorption band were limited - to our knowledge - to the line strengths and to the line positions.

  2. A SEMI-ANALYTICAL LINE TRANSFER MODEL TO INTERPRET THE SPECTRA OF GALAXY OUTFLOWS

    International Nuclear Information System (INIS)

    Scarlata, C.; Panagia, N.

    2015-01-01

    We present a semi-analytical line transfer model, (SALT), to study the absorption and re-emission line profiles from expanding galactic envelopes. The envelopes are described as a superposition of shells with density and velocity varying with the distance from the center. We adopt the Sobolev approximation to describe the interaction between the photons escaping from each shell and the remainder of the envelope. We include the effect of multiple scatterings within each shell, properly accounting for the atomic structure of the scattering ions. We also account for the effect of a finite circular aperture on actual observations. For equal geometries and density distributions, our models reproduce the main features of the profiles generated with more complicated transfer codes. Also, our SALT line profiles nicely reproduce the typical asymmetric resonant absorption line profiles observed in starforming/starburst galaxies whereas these absorption profiles cannot be reproduced with thin shells moving at a fixed outflow velocity. We show that scattered resonant emission fills in the resonant absorption profiles, with a strength that is different for each transition. Observationally, the effect of resonant filling depends on both the outflow geometry and the size of the outflow relative to the spectroscopic aperture. Neglecting these effects will lead to incorrect values of gas covering fraction and column density. When a fluorescent channel is available, the resonant profiles alone cannot be used to infer the presence of scattered re-emission. Conversely, the presence of emission lines of fluorescent transitions reveals that emission filling cannot be neglected

  3. Ultrasonic absorption

    International Nuclear Information System (INIS)

    Beyer, R.T.

    1985-01-01

    The paper reviews studies of ultrasonic absorption in liquid alkali metals. The experimental methods to measure the absorption coefficients are briefly described. Experimental results reported for the liquid metals: sodium, potassium, rubidium and caesium, at medium temperatures, are presented, as well as data for liquid alloys. Absorption losses due to the presence of an external magnetic field, and the effects of viscosity on the absorption in metals, are both discussed. (U.K.)

  4. Water absorption lines, 931-961 nm - Selected intensities, N2-collision-broadening coefficients, self-broadening coefficients, and pressure shifts in air

    Science.gov (United States)

    Giver, L. P.; Gentry, B.; Schwemmer, G.; Wilkerson, T. D.

    1982-01-01

    Intensities were measured for 97 lines of H2O vapor between 932 and 961 nm. The lines were selected for their potential usefulness for remote laser measurements of H2O vapor in the earth's atmosphere. The spectra were obtained with several different H2O vapor abundances and N2 broadening gas pressures; the spectral resolution was 0.046/cm FWHM. Measured H2O line intensities range from 7 x 10 to the -25th to 7 x 10 to the -22nd/cm per (molecules/sq cm). H2O self-broadening coefficients were measured for 13 of these strongest lines; the mean value was 0.5/cm per atm. N2-collision-broadening coefficients were measured for 73 lines, and the average was 0.11 cm per atm HWHM. Pressure shifts in air were determined for a sample of six lines between 948 and 950 nm; these lines shift to lower frequency by an amount comparable to 0.1 of the collision-broadened widths measured in air or N2. The measured intensities of many lines of 300-000 band are much larger than expected from prior computations, in some cases by over an order of magnitude. Coriolis interactions with the stronger 201-000 band appear to be the primary cause of the enhancement of these line intensities.

  5. On-line monitoring of Soxhlet extraction by chromatography and mass spectrometry to reveal temporal extract profiles.

    Science.gov (United States)

    Chen, Ssu-Ying; Urban, Pawel L

    2015-06-30

    Soxhlet extraction is a popular sample preparation technique used in chemical analysis. It enables liberation of molecules embedded in complex matrices (for example, plant tissues, foodstuffs). In most protocols, samples are analyzed after the extraction process is complete. However, in order to optimize extraction conditions and enable comparisons between different types of extraction, it would be desirable to monitor it in real time. The main development of this work is the design and construction of the interface between Soxhlet extractor and GC-MS as well as ESI-MS system. The temporal extract profiles, obtained in the course of real-time GC-MS monitoring, have been fitted with mathematical functions to analyze extraction kinetics of different analytes. For example, the mass transfer coefficients of pinene, limonene and terpinene in lemon sample, estimated using the first-order kinetic model, are 0.540h(-1), 0.507h(-1) and 0.722h(-1), respectively. On the other hand, the Peleg model provides the following extraction rates of pinene, limonene and terpinene: 0.370nMh(-1), 0.216nMh(-1) and 0.596nMh(-1), respectively. The results suggest that both first-order kinetic and Peleg equations can be used to describe the progress of Soxhlet extraction. On-line monitoring of Soxhlet extraction reveals extractability of various analytes present in natural samples (plant tissue), and can potentially facilitate optimization of the extraction process. Copyright © 2015 Elsevier B.V. All rights reserved.

  6. A high resolution atlas of Mg II profiles

    Science.gov (United States)

    Ewald, R.; Nichols-Bohlin, Joy Y.; Kondo, Yoji

    1990-01-01

    An atlas of high dispersion Mg II profiles for standard stars of spectral types B0 through G9 is presented. The atlas contains plots of the Mg II profiles for approximately 65 stars and associated equivalent width measurements for both absorption and emission components, and the subordinate lines. The atlas is used to investigate systematic behavior of the Mg II profiles and correlation of the behavior with spectral classification.

  7. Bursal transcriptome profiling of different inbred chicken lines reveals key differentially expressed genes at 3 days post-infection with very virulent infectious bursal disease virus.

    Science.gov (United States)

    Farhanah, Mohd Isa; Yasmin, Abd Rahaman; Mat Isa, Nurulfiza; Hair-Bejo, Mohd; Ideris, Aini; Powers, Claire; Oladapo, Omobolanle; Nair, Venugopal; Khoo, Jia-Shiun; Ghazali, Ahmad-Kamal; Yee, Wai-Yan; Omar, Abdul Rahman

    2018-01-01

    Infectious bursal disease is a highly contagious disease in the poultry industry and causes immunosuppression in chickens. Genome-wide regulations of immune response genes of inbred chickens with different genetic backgrounds, following very virulent infectious bursal disease virus (vvIBDV) infection are poorly characterized. Therefore, this study aims to analyse the bursal tissue transcriptome of six inbred chicken lines 6, 7, 15, N, O and P following infection with vvIBDV strain UK661 using strand-specific next-generation sequencing, by highlighting important genes and pathways involved in the infected chicken during peak infection at 3 days post-infection. All infected chickens succumbed to the infection without major variations among the different lines. However, based on the viral loads and bursal lesion scoring, lines P and 6 can be considered as the most susceptible lines, while lines 15 and N were regarded as the least affected lines. Transcriptome profiling of the bursa identified 4588 genes to be differentially expressed, with 2985 upregulated and 1642 downregulated genes, in which these genes were commonly or uniquely detected in all or several infected lines. Genes that were upregulated are primarily pro-inflammatory cytokines, chemokines and IFN-related. Various genes that are associated with B-cell functions and genes related to apoptosis were downregulated, together with the genes involved in p53 signalling. In conclusion, bursal transcriptome profiles of different inbred lines showed differential expressions of pro-inflammatory cytokines and chemokines, Th1 cytokines, JAK-STAT signalling genes, MAPK signalling genes, and their related pathways following vvIBDV infection.

  8. The spectral-line moment-based (SLMB) modeling of the wide band and global blackbody-weighted transmission function and cumulative distribution function of the absorption coefficient in uniform gaseous media

    Energy Technology Data Exchange (ETDEWEB)

    Andre, Frederic [Centre de Thermique de Lyon (CETHIL, CNRS-INSA Lyon-UCBL), Bat. Sadi Carnot, INSA-Lyon, Lyon F-69621 (France)], E-mail: frederic.andre@insa-lyon.fr; Vaillon, Rodolphe [Centre de Thermique de Lyon (CETHIL, CNRS-INSA Lyon-UCBL), Bat. Sadi Carnot, INSA-Lyon, Lyon F-69621 (France)

    2008-09-15

    The spectral-line moment-based (SLMB) modeling is proposed for the calculation of radiative properties of gases on any spectral width. The associated mathematical formulation is obtained by applying several concepts of the k-distribution methods such as the reordering of the wavenumber scale by monotonic variations of the absorption coefficient, together with the application of the k-moment method's principles. This approach gives both a general formula for the BTF and a simple and readily applicable approximation for the blackbody-weighted cumulated k-distribution function of the absorption coefficient. The model is applied for the computation of wide band BTFs and cumulative k-distributions for uniform columns of CO{sub 2} and H{sub 2}O in the temperature range (300-2400 K) at atmospheric pressure. Model parameters are deduced from line-by-line (LBL) spectra calculated using the HITEMP database. Comparisons with LBL reference data as well as with contemporary modeling approaches (SLW, FSK, SNB) are performed and discussed.

  9. Dislocation density and Burgers vector population in fiber-textured Ni thin films determined by high-resolution X-ray line profile analysis

    DEFF Research Database (Denmark)

    Csiszár, Gábor; Pantleon, Karen; Alimadadi, Hossein

    2012-01-01

    distribution are determined by high-resolution X-ray diffraction line profile analysis. The substructure parameters are correlated with the strength of the films by using the combined Taylor and Hall-Petch relations. The convolutional multiple whole profile method is used to obtain the substructure parameters......Nanocrystalline Ni thin films have been produced by direct current electrodeposition with different additives and current density in order to obtain 〈100〉, 〈111〉 and 〈211〉 major fiber textures. The dislocation density, the Burgers vector population and the coherently scattering domain size...

  10. Profile of Human TERT and P73 in Oral Squamous Cell Carcinoma Cell Lines Compared to Normal Human Oral Mucosa: a Preliminary Study

    Directory of Open Access Journals (Sweden)

    Ambar Kusuma Astuti

    2013-05-01

    Full Text Available Genetic alteration on p53 allows cellular immortalization and predisposes cells to neoplastic transformation. This immortalization is related to telomere length maintenance by telomerase. Human TERT is a key compo-nent of telomerase, which activity is suppressed by p53. The p73, the homolog of p53, has a similar ability in tumor suppression. The P73 is expressed at a different level in various cancer cells and normal tissues. Profile of human TERT and P73 in mutant p53 OSCC cell line and normal human oral mucosa have not been known. Objective: To observe human TERT and P73 profile in mutant p53 OSCC cell lines and normal human oral mucosa. Methods: The extracted protein of HSC-3 and HSC-4 cell lines and normal mucosal tissues were ana-lyzed with SDS PAGE to detect human TERT and p73 expression based on the molecular weight. Results: The HSC-3 cell line showed thicker band density of P73 compared to its density of HSC-4. Only 50% of normal oral mucosa tissue showed thick P73 band density. The human TERT band was clearly shown in HSC-3 and HSC-4 cell lines but not in normal oral mucosa. Conclusion: Different profile of human TERT and P73 in OSCC cell lines and normal oral mucosa might be cell-type specific and influenced by the status of p53. Analy-sis of the role of p73 in these cancers might need further research to determine possible p73 substitution for p53 function.DOI: 10.14693/jdi.v18i1.55

  11. Saturated two-photon absorption by atoms in a perturber gas

    NARCIS (Netherlands)

    Nienhuis, G.

    We derive a general expression for the two-photon absorption spectrum of a state-atom excited by two monochromatic radiation fields. Collisional line-brodening effects are incorporated, and the result allows inclusion of profiles with a validity outside the impact limit. Results of previous work are

  12. Development of an x-ray beam line at the NSLS for studies in materials science using x-ray absorption spectroscopy: Annual progress report

    International Nuclear Information System (INIS)

    Sayers, D.E.

    1987-01-01

    The research programs reported span virtually the entire range of condensed matter studies involving the fields of solid state physics, chemistry, electrochemistry, materials science and biochemistry. Results are discussed for various groups. Topics reported include work on amorphous chalcogenide semiconductors, particularly photostructural changes, kinetics of structural changes and rapid quenching, bond strengths, force constants and phonons. Also reported are temperature dependent EXAFS studies of bonding in high temperature alloys, amorphous systems, disordered alloys and studies of resolve electronic structure, EXAFS and XANES studies of permanent magnet systems based on Nd 2 Fe 14 B, glancing angle EXAFS study of Nb/Al and Nb/Si interfacial systems, x-ray absorption of krypton-implanted solids and high dose implants into silicon, and x-ray absorption and EXAFS studies of superconducting oxide compounds of Cu and related magnetic systems. Work is also reported on XAFS measurements on the icosahedral phase

  13. Calculated Hanle transmission and absorption spectra of the 87Rb D1 line with residual magnetic field for arbitrarily polarized light

    International Nuclear Information System (INIS)

    Noh, Heung-Ryoul; Moon, Han Seb

    2010-01-01

    This paper reports a theoretical study on the transmission spectra of an arbitrarily polarized laser beam through a rubidium cell with or without a buffer gas in Hanle-type coherent population trapping (CPT). This study examined how laser polarization, transverse magnetic field, and collisions with buffer gas affects the spectrum. The transmission spectrum due to CPT and the absorption spectrum due to the level crossing absorption (LCA) were calculated according to the laser polarization. The results show that the LCA is strongly dependent on the transverse magnetic field and interaction time of the atoms with a laser light via collisions with the buffer gas. In addition, the spectral shape of the calculated Hanle spectrum is closely related to the direction between the (stray) transverse magnetic field and polarization of the laser.

  14. Profiling of polyunsaturated fatty acids in human serum using off-line and on-line solid phase extraction-nano-liquid chromatography-quadrupole-time-of-flight mass spectrometry.

    Science.gov (United States)

    Gu, Wan-Yi; Liu, Mei-Xian; Sun, Bao-Qing; Guo, Ming-Quan; Wu, Jian-Lin; Li, Na

    2018-02-16

    Polyunsaturated fatty acids (PUFAs) play a pivotal role in the biological effects, and are the potential biomarkers for some diseases. However, the structural diversity and similarity, the low concentration, and the interference of high abundant endogenous components challenge the PUFAs profiling. Herein, a novel analytical approach, off-line and on-line solid phase extraction-nano-liquid chromatography-quadrupole-time-of-flight mass spectrometry (off-line and on-line SPE-nano-LC-Q-TOF-MS), was established to monitor the PUFAs. The combination of off-line and on-line SPE removed most of impurities, and the recoveries ranged from 80.1% to 93.0% and the matrix effects were from 85.1% to 92.8%. Using this method, 51 PUFAs could be separated well and quantified with the limits of quantification between 0.006 and 2.2 pg. Finally, this developed method was applied successfully to simultaneously qualify and quantify the potential biomarkers in the allergic patients. 21 PUFAs including LTB 4, 5S-, 11S-, 15S-HETE and 15S-HEPE showed significant differences. Our study indicated that the established method has the potential to sensitively and accurately determine the PUFAs in biological samples. Copyright © 2018 Elsevier B.V. All rights reserved.

  15. Genome wide profiling of human embryonic stem cells (hESCs, their derivatives and embryonal carcinoma cells to develop base profiles of U.S. Federal government approved hESC lines

    Directory of Open Access Journals (Sweden)

    Baker Shawn C

    2006-05-01

    Full Text Available Abstract Background In order to compare the gene expression profiles of human embryonic stem cell (hESC lines and their differentiated progeny and to monitor feeder contaminations, we have examined gene expression in seven hESC lines and human fibroblast feeder cells using Illumina® bead arrays that contain probes for 24,131 transcript probes. Results A total of 48 different samples (including duplicates grown in multiple laboratories under different conditions were analyzed and pairwise comparisons were performed in all groups. Hierarchical clustering showed that blinded duplicates were correctly identified as the closest related samples. hESC lines clustered together irrespective of the laboratory in which they were maintained. hESCs could be readily distinguished from embryoid bodies (EB differentiated from them and the karyotypically abnormal hESC line BG01V. The embryonal carcinoma (EC line NTera2 is a useful model for evaluating characteristics of hESCs. Expression of subsets of individual genes was validated by comparing with published databases, MPSS (Massively Parallel Signature Sequencing libraries, and parallel analysis by microarray and RT-PCR. Conclusion we show that Illumina's bead array platform is a reliable, reproducible and robust method for developing base global profiles of cells and identifying similarities and differences in large number of samples.

  16. Genome wide profiling of human embryonic stem cells (hESCs), their derivatives and embryonal carcinoma cells to develop base profiles of U.S. Federal government approved hESC lines.

    Science.gov (United States)

    Liu, Ying; Shin, Soojung; Zeng, Xianmin; Zhan, Ming; Gonzalez, Rodolfo; Mueller, Franz-Josef; Schwartz, Catherine M; Xue, Haipeng; Li, Huai; Baker, Shawn C; Chudin, Eugene; Barker, David L; McDaniel, Timothy K; Oeser, Steffen; Loring, Jeanne F; Mattson, Mark P; Rao, Mahendra S

    2006-05-03

    In order to compare the gene expression profiles of human embryonic stem cell (hESC) lines and their differentiated progeny and to monitor feeder contaminations, we have examined gene expression in seven hESC lines and human fibroblast feeder cells using Illumina bead arrays that contain probes for 24,131 transcript probes. A total of 48 different samples (including duplicates) grown in multiple laboratories under different conditions were analyzed and pairwise comparisons were performed in all groups. Hierarchical clustering showed that blinded duplicates were correctly identified as the closest related samples. hESC lines clustered together irrespective of the laboratory in which they were maintained. hESCs could be readily distinguished from embryoid bodies (EB) differentiated from them and the karyotypically abnormal hESC line BG01V. The embryonal carcinoma (EC) line NTera2 is a useful model for evaluating characteristics of hESCs. Expression of subsets of individual genes was validated by comparing with published databases, MPSS (Massively Parallel Signature Sequencing) libraries, and parallel analysis by microarray and RT-PCR. we show that Illumina's bead array platform is a reliable, reproducible and robust method for developing base global profiles of cells and identifying similarities and differences in large number of samples.

  17. Flow injection analysis-flame atomic absorption spectrometry system for indirect determination of sulfite after on-line reduction of solid-phase manganese (IV) dioxide reactor.

    Science.gov (United States)

    Zare-Dorabei, Rouholah; Boroun, Shokoufeh; Noroozifar, Meissam

    2018-02-01

    A new and simple flow injection method followed by atomic absorption spectrometry was developed for indirect determination of sulfite. The proposed method is based on the oxidation of sulfite to sulphate ion using solid-phase manganese dioxide (30% W/W suspended on silica gel beads) reactor. MnO 2 will be reduced to Mn(II) by sample injection in to the column under acidic carrier stream of HNO 3 (pH 2) with flow rate of 3.5mLmin -1 at room temperature. Absorption measurement of Mn(II) which is proportional to the concentration of sulfite in the sample was carried out by atomic absorption spectrometry. The calibration curve was linear up to 25mgL -1 with a detection limit (DL) of 0.08mgL -1 for 400µL injection sample volume. The presented method is efficient toward sulfite determination in sugar and water samples with a relative standard deviation (RSD) less than 1.2% and a sampling rate of about 60h -1 . Copyright © 2017 Elsevier B.V. All rights reserved.

  18. Nonlinear effects in collective absorption

    International Nuclear Information System (INIS)

    Uenoyama, Takeshi; Mima, Kunioki; Watanabe, Tsuguhiro.

    1981-01-01

    The collective absorption of high intensity laser radiation is analyzed numerically. Density profile modification due to the ponderomotive force associating laser radiation and the excited electron plasma waves is self-consistently taken into account, and the intensity dependences of the absorption efficiency are obtained. In the high intensity regime, the absorption efficiency is found to be strongly enhanced in the plasma without flow, but reduced with supersonic flow. (author)

  19. Comparative transcript profiling of alloplasmic male-sterile lines revealed altered gene expression related to pollen development in rice (Oryza sativa L.).

    Science.gov (United States)

    Hu, Jihong; Chen, Guanglong; Zhang, Hongyuan; Qian, Qian; Ding, Yi

    2016-08-05

    Cytoplasmic male sterility (CMS) is an ideal model for investigating the mitochondrial-nuclear interaction and down-regulated genes in CMS lines which might be the candidate genes for pollen development in rice. In this study, a set of rice alloplasmic sporophytic CMS lines was obtained by successive backcrossing of Meixiang B, with three different cytoplasmic types: D62A (D type), ZS97A (WA type) and XQZ-A (DA type). Using microarray, the anther transcript profiles of the three indica rice CMS lines revealed 622 differentially expressed genes (DEGs) in each of the three CMS lines compared with the maintainer line Meixiang B. GO and MapMan analysis indicated that these DEGs were mainly involved in lipid metabolism and cell wall organization. Compared with the gene expression of sporophytic and gametophytic CMS lines, 303 DEGs were identified and 56 of them were down-regulated in all the CMS lines of rice. These down-regulated DEGs in the CMS lines were found to be involved in tapetum or cell wall formation and their suppressed expression might be related to male sterility. Weighted gene co-expression network analysis (WGCNA) revealed that two modules were significantly associated with male sterility and many hub genes that were differentially expressed in the CMS lines. A large set of putative genes involved in anther development was identified in the present study. The results will give some information for the nuclear gene regulation by different cytoplasmic genotypes and provide a rich resource for further functional research on the pollen development in rice.

  20. SELF-ABSORPTION IN THE SOLAR TRANSITION REGION

    International Nuclear Information System (INIS)

    Yan, Limei; He, Jiansen; Wang, Linghua; Tu, Chuanyi; Zhang, Lei; Peter, Hardi; Chen, Feng; Barczynski, Krzysztof; Tian, Hui; Xia, Lidong

    2015-01-01

    Transient brightenings in the transition region of the Sun have been studied for decades and are usually related to magnetic reconnection. Recently, absorption features due to chromospheric lines have been identified in transition region emission lines raising the question of the thermal stratification during such reconnection events. We analyze data from the Interface Region Imaging Spectrograph in an emerging active region. Here the spectral profiles show clear self-absorption features in the transition region lines of Si iv. While some indications existed that opacity effects might play some role in strong transition region lines, self-absorption has not been observed before. We show why previous instruments could not observe such self-absorption features, and discuss some implications of this observation for the corresponding structure of reconnection events in the atmosphere. Based on this we speculate that a range of phenomena, such as explosive events, blinkers or Ellerman bombs, are just different aspects of the same reconnection event occurring at different heights in the atmosphere

  1. Deformation of Sr and Rb isotopes close to the N=Z line via β-decay studies using the total absorption technique

    OpenAIRE

    Pérez-Cerdán, Ana Belén; Rubio, Berta; Gelletly, W.; Algora, Alejandro; Agramunt, Jorge; Nácher, Enrique; Taín, José Luis; Sarriguren, Pedro; Fraile, Luis M.; García Borge, María José; Caballero Ontanaya, Luis; Dessagne, Ph.; Jungclaus, Andrea; Heitz, G.; Maréchal, F.

    2013-01-01

    A study of the Gamow-Teller strength distributions B(GT) in the beta decay of 78Sr and 76,78Rb has been made using a total absorption spectrometer (TAS). Following the success in deducing the sign of the deformation for 76Sr, a similar approach is adopted for 78Sr based on a comparison of the measured B(GT) with quasiparticle random-phase approximation calculations. This work confirms its previously expected prolate deformation in the ground state. Conclusions about the structure of the odd-o...

  2. Absorption studies

    International Nuclear Information System (INIS)

    Ganatra, R.D.

    1992-01-01

    Absorption studies were once quite popular but hardly anyone does them these days. It is easier to estimate the blood level of the nutrient directly by radioimmunoassay (RIA). However, the information obtained by estimating the blood levels of the nutrients is not the same that can be obtained from the absorption studies. Absorption studies are primarily done to find out whether some of the essential nutrients are absorbed from the gut or not and if they are absorbed, to determine how much is being absorbed. In the advanced countries, these tests were mostly done to detect pernicious anaemia where vitamin B 12 is not absorbed because of the lack of the intrinsic factor in the stomach. In the tropical countries, ''malabsorption syndrome'' is quire common. In this condition, several nutrients like fat, folic acid and vitamin B 12 are not absorbed. It is possible to study absorption of these nutrients by radioisotopic absorption studies

  3. Sequential injection on-line matrix removal and trace metal preconcentration using a PTFE beads packed column as demonstrated for the determination of cadmium by electrothermal atomic absorption spectrometry

    DEFF Research Database (Denmark)

    Wang, Jianhua; Hansen, Elo Harald

    2002-01-01

    A sequential injection (SI) on-line matrix removal and trace metal preconcentration procedure by using a novel microcolumn packed with PTFE beads is described, and demonstrated for trace cadmium analysis with detection by electrothermal atomic absorption spectrometry (ETAAS). The analyte is initi......A sequential injection (SI) on-line matrix removal and trace metal preconcentration procedure by using a novel microcolumn packed with PTFE beads is described, and demonstrated for trace cadmium analysis with detection by electrothermal atomic absorption spectrometry (ETAAS). The analyte...... is initially complexed with diethyldithiophosphate (DDPA) and adsorbed onto the column, which is afterwards eluted with 50 mul of ethanol and subsequently introduced via air segmentation into the graphite tube for quantification. The ETAAS determination is synchronized with sample pre-treatment in the SI....../h, quantitative adsorption of cadmium (99% retention efficiency) and an enrichment factor of 59.4 were obtained, as compared with only 46.7% and 28.0 by using a knotted reactor of similar internal surface area as the packed column. The detection limits and precision (RSD, 0.1 mug/l Cd) are at the same levels, i...

  4. Stellar Absorption Line Analysis of Local Star-forming Galaxies: The Relation between Stellar Mass, Metallicity, Dust Attenuation, and Star Formation Rate

    International Nuclear Information System (INIS)

    Jabran Zahid, H.; Kudritzki, Rolf-Peter; Ho, I-Ting; Conroy, Charlie; Andrews, Brett

    2017-01-01

    We analyze the optical continuum of star-forming galaxies in the Sloan Digital Sky Survey by fitting stacked spectra with stellar population synthesis models to investigate the relation between stellar mass, stellar metallicity, dust attenuation, and star formation rate. We fit models calculated with star formation and chemical evolution histories that are derived empirically from multi-epoch observations of the stellar mass–star formation rate and the stellar mass–gas-phase metallicity relations, respectively. We also fit linear combinations of single-burst models with a range of metallicities and ages. Star formation and chemical evolution histories are unconstrained for these models. The stellar mass–stellar metallicity relations obtained from the two methods agree with the relation measured from individual supergiant stars in nearby galaxies. These relations are also consistent with the relation obtained from emission-line analysis of gas-phase metallicity after accounting for systematic offsets in the gas-phase metallicity. We measure dust attenuation of the stellar continuum and show that its dependence on stellar mass and star formation rate is consistent with previously reported results derived from nebular emission lines. However, stellar continuum attenuation is smaller than nebular emission line attenuation. The continuum-to-nebular attenuation ratio depends on stellar mass and is smaller in more massive galaxies. Our consistent analysis of stellar continuum and nebular emission lines paves the way for a comprehensive investigation of stellar metallicities of star-forming and quiescent galaxies.

  5. Radial Profile of the 3.5 kev Line Out to R200 in the Perseus Cluster

    Science.gov (United States)

    Franse, Jeroen; Bulbul, Esra; Foster, Adam; Boyarsky, Alexey; Markevitch, Maxim; Bautz, Mark; Lakubovskyi, Dmytro; Loewenstein, Michael; McDonald, Michael; Miller, Eric; hide

    2016-01-01

    The recent discovery of the unidentified emission line at 3.5 keV in galaxies and clusters has attracted great interest from the community. As the origin of the line remains uncertain, we study the surface brightness distribution of the line in the Perseus cluster since that information can be used to identify its origin. We examine the flux distribution of the 3.5 keV line in the deep Suzaku observations of the Perseus cluster in detail. The 3.5 keV line is observed in three concentric annuli in the central observations, although the observations of the outskirts of the cluster did not reveal such a signal. We establish that these detections and the upper limits from the non-detections are consistent with a dark matter decay origin. However, absence of positive detection in the outskirts is also consistent with some unknown astrophysical origin of the line in the dense gas of the Perseus core, as well as with a dark matter origin with a steeper dependence on mass than the dark matter decay. We also comment on several recently published analyses of the 3.5 keV line.

  6. Genome Wide Expression Profiling of Cancer Cell Lines Cultured in Microgravity Reveals Significant Dysregulation of Cell Cycle and MicroRNA Gene Networks.

    Directory of Open Access Journals (Sweden)

    Prasanna Vidyasekar

    Full Text Available Zero gravity causes several changes in metabolic and functional aspects of the human body and experiments in space flight have demonstrated alterations in cancer growth and progression. This study reports the genome wide expression profiling of a colorectal cancer cell line-DLD-1, and a lymphoblast leukemic cell line-MOLT-4, under simulated microgravity in an effort to understand central processes and cellular functions that are dysregulated among both cell lines. Altered cell morphology, reduced cell viability and an aberrant cell cycle profile in comparison to their static controls were observed in both cell lines under microgravity. The process of cell cycle in DLD-1 cells was markedly affected with reduced viability, reduced colony forming ability, an apoptotic population and dysregulation of cell cycle genes, oncogenes, and cancer progression and prognostic markers. DNA microarray analysis revealed 1801 (upregulated and 2542 (downregulated genes (>2 fold in DLD-1 cultures under microgravity while MOLT-4 cultures differentially expressed 349 (upregulated and 444 (downregulated genes (>2 fold under microgravity. The loss in cell proliferative capacity was corroborated with the downregulation of the cell cycle process as demonstrated by functional clustering of DNA microarray data using gene ontology terms. The genome wide expression profile also showed significant dysregulation of post transcriptional gene silencing machinery and multiple microRNA host genes that are potential tumor suppressors and proto-oncogenes including MIR22HG, MIR17HG and MIR21HG. The MIR22HG, a tumor-suppressor gene was one of the highest upregulated genes in the microarray data showing a 4.4 log fold upregulation under microgravity. Real time PCR validated the dysregulation in the host gene by demonstrating a 4.18 log fold upregulation of the miR-22 microRNA. Microarray data also showed dysregulation of direct targets of miR-22, SP1, CDK6 and CCNA2.

  7. Interstellar Gas-phase Element Depletions in the Small Magellanic Cloud: A Guide to Correcting for Dust in QSO Absorption Line Systems

    Science.gov (United States)

    Jenkins, Edward B.; Wallerstein, George

    2017-04-01

    We present data on the gas-phase abundances for 9 different elements in the interstellar medium of the Small Magellanic Cloud (SMC), based on the strengths of ultraviolet absorption features over relevant velocities in the spectra of 18 stars within the SMC. From this information and the total abundances defined by the element fractions in young stars in the SMC, we construct a general interpretation on how these elements condense into solid form onto dust grains. As a group, the elements Si, S, Cr, Fe, Ni, and Zn exhibit depletion sequences similar to those in the local part of our Galaxy defined by Jenkins. The elements Mg and Ti deplete less rapidly in the SMC than in the Milky Way, and Mn depletes more rapidly. We speculate that these differences might be explained by the different chemical affinities to different existing grain substrates. For instance, there is evidence that the mass fractions of polycyclic aromatic hydrocarbons in the SMC are significantly lower than those in the Milky Way. We propose that the depletion sequences that we observed for the SMC may provide a better model for interpreting the element abundances in low-metallicity Damped Lyman Alpha (DLA) and sub-DLA absorption systems that are recorded in the spectra of distant quasars and gamma-ray burst afterglows. Based on observations with the NASA/ESA Hubble Space Telescope and additional data obtained from the Data Archive at the Space Telescope Science Institute, which is operated by the Associations of Universities for Research in Astronomy, Incorporated, under NASA contract NAS5-26555. These observations are associated with program nr. 13778.

  8. Expression Profiling of Glucosinolate Biosynthetic Genes in Brassica oleracea L. var. capitata Inbred Lines Reveals Their Association with Glucosinolate Content

    Directory of Open Access Journals (Sweden)

    Arif Hasan Khan Robin

    2016-06-01

    Full Text Available Glucosinolates are the biochemical compounds that provide defense to plants against pathogens and herbivores. In this study, the relative expression level of 48 glucosinolate biosynthesis genes was explored in four morphologically-different cabbage inbred lines by qPCR analysis. The content of aliphatic and indolic glucosinolate molecules present in those cabbage lines was also estimated by HPLC analysis. The possible association between glucosinolate accumulation and related gene expression level was explored by principal component analysis (PCA. The genotype-dependent variation in the relative expression level of different aliphatic and indolic glucosinolate biosynthesis genes is the novel result of this study. A total of eight different types of glucosinolates, including five aliphatic and three indolic glucosinolates, was detected in four cabbage lines. Three inbred lines BN3383, BN4059 and BN4072 had no glucoraphanin, sinigrin and gluconapin detected, but the inbred line BN3273 had these three aliphatic glucosinolate compounds. PCA revealed that a higher expression level of ST5b genes and lower expression of GSL-OH was associated with the accumulation of these three aliphatic glucosinolate compounds. PCA further revealed that comparatively higher accumulation of neoglucobrassicin in the inbred line, BN4072, was associated with a high level of expression of MYB34 (Bol017062 and CYP81F1 genes. The Dof1 and IQD1 genes probably trans-activated the genes related to biosynthesis of glucoerucin and methoxyglucobrassicin for their comparatively higher accumulation in the BN4059 and BN4072 lines compared to the other two lines, BN3273 and BN3383. A comparatively higher progoitrin level in BN3273 was probably associated with the higher expression level of the GSL-OH gene. The cabbage inbred line BN3383 accounted for the significantly higher relative expression level for the 12 genes out of 48, but this line had comparatively lower total

  9. Folate absorption

    International Nuclear Information System (INIS)

    Baker, S.J.

    1976-01-01

    Folate is the generic term given to numerous compounds of pteroic acid with glutamic acid. Knowledge of absorption is limited because of the complexities introduced by the variety of compounds and because of the inadequacy of investigational methods. Two assay methods are in use, namely microbiological and radioactive. Techniques used to study absorption include measurement of urinary excretion, serum concentration, faecal excretion, intestinal perfusion, and haematological response. It is probably necessary to test absorption of both pteroylmonoglutamic acid and one or more polyglutamates, and such tests would be facilitated by availability of synthesized compounds labelled with radioactive tracers at specifically selected sites. (author)

  10. Delineation of high water line and seasonal beach profiling at Kalbadevi Bay, Maharashtra, central west coast of India

    Digital Repository Service at National Institute of Oceanography (India)

    Ganesan, P.

    shown on the aerial photography or on remote sensing maps, are highly dynamic and hence less reliable indicators of shoreline position (Robert A. Morton et al., 1999). The present report analyses the results of high tide line changes and beach... : Proceedings for Marine GeoSciences in India. 3. Ganeshan, P. 2003. Delineation of high tide line using Laser Trak and DGPS Instruments: With special reference to mapping techniques. NIO / TR / 5 / 2003. 4. Robert A. Morton and F. Michael...

  11. Narrative absorption

    DEFF Research Database (Denmark)

    Narrative Absorption brings together research from the social sciences and Humanities to solve a number of mysteries: Most of us will have had those moments, of being totally absorbed in a book, a movie, or computer game. Typically we do not have any idea about how we ended up in such a state. Nor...... do we fully realize how we might have changed as we return for the fictional worlds we have visited. The feeling of being absorbed is one of the most illusive and transient feelings, but also one that motivates audiences to spend considerable amounts of time in narrative worlds, and one...... that is central to our understanding of the effects of narratives on beliefs and behavior. Key specialists inform the reader of this book about the nature of the peculiar state of consciousness during episodes of absorption, the perception of absorption in history, the role of absorption in meaningful experiences...

  12. The effect of formulation additives on in vitro dissolution-absorption profile and in vivo bioavailability of telmisartan from brand and generic formulations.

    Science.gov (United States)

    Borbás, Enikő; Nagy, Zsombor K; Nagy, Brigitta; Balogh, Attila; Farkas, Balázs; Tsinman, Oksana; Tsinman, Konstantin; Sinkó, Bálint

    2018-03-01

    In this study, brand and four generic formulations of telmisartan, an antihypertensive drug, were used in in vitro simultaneous dissolution-absorption, investigating the effect of different formulation additives on dissolution and on absorption through an artificial membrane. The in vitro test was found to be sensitive enough to show even small differences between brand and generic formulations caused by the use of different excipients. By only changing the type of filler from sorbitol to mannitol in the formulation, the flux through the membrane was reduced by approximately 10%. Changing the salt forming agent as well resulted in approximately 20% of flux reduction compared to the brand formulation. This significant difference was clearly shown in the published in vivo results as well. The use of additional lactose monohydrate in the formulation also leads to approximately 10% reduction in flux. The results show that by changing excipients, the dissolution of telmisartan was not altered significantly, but the flux through the membrane was found to be significantly changed. These results pointed out the limitations of traditional USP dissolution tests and emphasized the importance of simultaneously measuring dissolution and absorption, which allows the complex effect of formulation excipients on both processes to be measured. Moreover, the in vivo predictive power of the simultaneous dissolution-absorption test was demonstrated by comparing the in vitro fluxes to in vivo bioequivalence study results. Copyright © 2018 Elsevier B.V. All rights reserved.

  13. New accurate theoretical line lists of 12CH4 and 13CH4 in the 0-13400 cm-1 range: Application to the modeling of methane absorption in Titan's atmosphere

    Science.gov (United States)

    Rey, Michaël; Nikitin, Andrei V.; Bézard, Bruno; Rannou, Pascal; Coustenis, Athena; Tyuterev, Vladimir G.

    2018-03-01

    The spectrum of methane is very important for the analysis and modeling of Titan's atmosphere but its insufficient knowledge in the near infrared, with the absence of reliable absorption coefficients, is an important limitation. In order to help the astronomer community for analyzing high-quality spectra, we report in the present work the first accurate theoretical methane line lists (T = 50-350 K) of 12CH4 and 13CH4 up to 13400 cm-1 ( > 0.75 μm). These lists are built from extensive variational calculations using our recent ab initio potential and dipole moment surfaces and will be freely accessible via the TheoReTS information system (http://theorets.univ-reims.fr, http://theorets.tsu.ru). Validation of these lists is presented throughout the present paper. For the sample of lines where upper energies were available from published analyses of experimental laboratory 12CH4 spectra, small empirical corrections in positions were introduced that could be useful for future high-resolution applications. We finally apply the TheoRetS line list to model Titan spectra as observed by VIMS and by DISR, respectively onboard Cassini and Huygens. These data are used to check that the TheoReTS line lists are able to model observations. We also make comparisons with other experimental or theoretical line lists. It appears that TheoRetS gives very reliable results better than ExoMol and even than HITRAN2012, except around 1.6 μm where it gives very similar results. We conclude that TheoReTS is suitable to be used for the modeling of planetary radiative transfer and photometry. A re-analysis of spectra recorded by the DISR instrument during the descent of the Huygens probe suggests that the CH4 mixing ratio decreases with altitude in Titan's stratosphere, reaching a value of ∼10-2 above the 110 km altitude.

  14. The absorption effect of the Lα-line Supplement to the paper 'On the Correlation Between the Hα-line emission rate and the ablation rate of a hydrogen pellet in tokamak discharges' – Nuclear Fusion 24 (1984) 697

    DEFF Research Database (Denmark)

    Chang, C. T.; Thomsen, Kenneth

    1985-01-01

    Several assumptions made in a previous study of the correlation between the Hα-line emission rate and the ablation rate of a hydrogen pellet injected into a tokamak discharge showed that the emission layer of the ablatant as optically thin with respect to all levels of the principal quantum numbe...

  15. On-line electrochemically controlled in-tube solid phase microextraction of inorganic selenium followed by hydride generation atomic absorption spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Asiabi, Hamid [Department of Chemistry, Tarbiat Modares University, P.O. Box 14115-175, Tehran (Iran, Islamic Republic of); Yamini, Yadollah, E-mail: yyamini@modares.ac.ir [Department of Chemistry, Tarbiat Modares University, P.O. Box 14115-175, Tehran (Iran, Islamic Republic of); Seidi, Shahram [Department of Analytical Chemistry, Faculty of Chemistry, K.N. Toosi University of Technology, Tehran (Iran, Islamic Republic of); Shamsayei, Maryam; Safari, Meysam; Rezaei, Fatemeh [Department of Chemistry, Tarbiat Modares University, P.O. Box 14115-175, Tehran (Iran, Islamic Republic of)

    2016-05-30

    In this work, for the first time, a rapid, simple and sensitive microextraction procedure is demonstrated for the matrix separation, preconcentration and determination of inorganic selenium species in water samples using an electrochemically controlled in-tube solid phase microextraction (EC-in-tube SPME) followed by hydride generation atomic absorption spectrometry (HG-AAS). In this approach, in which EC-in-tube SPME and HG-AAS system were combined, the total analysis time, was decreased and the accuracy, repeatability and sensitivity were increased. In addition, to increases extraction efficiency, a novel nanostructured composite coating consisting of polypyrrole (PPy) doped with ethyleneglycol dimethacrylate (EGDMA) was prepared on the inner surface of a stainless-steel tube by a facile electrodeposition method. To evaluate the offered setup and the new PPy-EGDMA coating, it was used to extract inorganic selenium species in water samples. Extraction of inorganic selenium species was carried out by applying a positive potential through the inner surface of coated in-tube under flow conditions. Under the optimized conditions, selenium was detected in amounts as small as 4.0 parts per trillion. The method showed good linearity in the range of 0.012–200 ng mL{sup −1}, with coefficients of determination better than 0.9996. The intra- and inter-assay precisions (RSD%, n = 5) were in the range of 2.0–2.5% and 2.7–3.2%, respectively. The validated method was successfully applied for the analysis of inorganic selenium species in some water samples and satisfactory results were obtained. - Graphical abstract: An electrochemically controlled in-tube solid phase microextraction followed by hydride generation atomic absorption spectrometry was developed for extraction and determination ultra-trace amounts of Se in aqueous solutions. - Highlights: • A nanostructured composite coating consisting of PPy doped with EGDMA was prepared. • The coating was

  16. Cryogenic-temperature profiling of high-power superconducting lines using local and distributed optical-fiber sensors

    CERN Document Server

    Chiuchiolo, Antonella; Consales, Marco; Giordano, Michele; Borriello, Anna; Bajas, Hugues; Galtarossa, Andrea; Bajko, Marta; Cusano, Andrea

    2015-01-01

    This contribution presents distributed and multi-point fiber-optic monitoring of cryogenic temperatures along a superconducting power transmission line down to 30 K and over 20 m distance. Multi-point measurements were conducted using fiber Bragg gratings sensors coated with two different functional overlays (epoxy and PMMA) demonstrating cryogenic operation in the range 300 – 4.2 K. Distributed measurements exploited optical frequency-domain reflectometry to analyze the Rayleigh scattering along two concatenated fibers with different coatings (acrylate and polyimide). The integrated system has been placed along the 20 m long cryostat of a superconducting power transmission line, which is currently being tested at the European Organization for Nuclear Research (CERN). Cool-down events from 300 K to 30 K have been successfully measured in space and time, confirming the viability of these approaches to the monitoring of cryogenic temperatures along a superconducting transmission line.

  17. Transcriptome profiling of differentially expressed genes in floral buds and flowers of male sterile and fertile lines in watermelon.

    Science.gov (United States)

    Rhee, Sun-Ju; Seo, Minseok; Jang, Yoon-Jeong; Cho, Seoae; Lee, Gung Pyo

    2015-11-09

    Male sterility is an important mechanism for the production of hybrid seeds in watermelon. Although fruit development has been studied extensively in watermelon, there are no reports on gene expression in floral organs. In this study, RNA-sequencing (RNA-seq) was performed in two near-isogenic watermelon lines (genic male sterile [GMS] line, DAH3615-MS and male fertile line, DAH3615) to identify the differentially expressed genes (DEGs) related to male sterility. DEG analysis showed that 1259 genes were significantly associated with male sterility at a FDR P-value of watermelon. This analysis revealed essential genes responsible for stamen development, including pollen development and pollen tube elongation, and allowed their functional classification. These results provided new information on global mechanisms related to male sterility in watermelon.

  18. Determination of antimony by electrochemical hydride generation atomic absorption spectrometry in samples with high iron content using chelating resins as on-line removal system

    International Nuclear Information System (INIS)

    Bolea, E.; Arroyo, D.; Laborda, F.; Castillo, J.R.

    2006-01-01

    A method for the removal of the interference caused by iron on electrochemical generation of stibine is proposed. It consists of a chelating resin Chelex 100 column integrated into a flow injection system and coupled to the electrochemical hydride generator quartz tube atomic absorption spectrometer (EcHG-QT-AAS). Iron, as Fe(II), is retained in the column with high efficiency, close to 99.9% under optimal conditions. No significant retention was observed for Sb(III) under same conditions and a 97 ± 5% signal recovery was achieved. An electrochemical hydride generator with a concentric configuration and a reticulated vitreous carbon cathode was employed. The system is able to determine antimony concentrations in the range of ng ml -1 in presence of iron concentrations up to 400 mg l -1 . The procedure was validated by analyzing PACS-2 marine sediments reference material with a 4% (w/w) iron content and a [Fe]:[Sb] ratio of 4000:1, which caused total antimony signal suppression on the electrochemical hydride generation system. A compost sample with high iron content (0.7%, w/w), was also analyzed. A good agreement was found on both samples with the certified value and the antimony concentration determined by ICP-MS, respectively

  19. Continuous ultrasound-assisted extraction of cadmium from legumes and dried fruit samples coupled with on-line preconcentration-flame atomic absorption spectrometry

    Energy Technology Data Exchange (ETDEWEB)

    Yebra, M.C.; Cancela, S. [University of Santiago de Compostela, Department of Analytical Chemistry, Nutrition and Bromatology, Santiago de Compostela (Spain)

    2005-06-01

    Cadmium was continuously extracted with diluted nitric acid from legumes and dried fruit samples using a simple, rapid and continuous ultrasound-assisted extraction system. A minicolumn packed with a chelating resin (Chelite P, with aminomethylphosphoric acid groups) was placed between the extraction unit and the detector for cadmium preconcentration. The cadmium content in the acid extract was retained into the minicolumn, and elution was carried out with hydrochloric acid, with this trace metal continuously monitored by flame atomic absorption spectrometry. An experimental design (Plackett-Burman 2{sup 6} x 3/16) was used to optimize the continuous leaching procedure and the preconcentration step. The method allowed a total sampling frequency of 10 and 14 samples per hour for legumes and dried fruit, respectively. The procedure displayed good precision (2.0 and 2.5%, respectively, expressed as relative standard deviations) for samples containing 0.202{+-}0.005 {mu}g g{sup -1} Cd (broad bean) and 0.239{+-}0.004 {mu}g g{sup -1} Cd (peanut). Detection limits of 0.014 {mu}g g{sup -1} Cd for 60 mg of legume samples and 0.011 {mu}g g{sup -1} Cd for 80 mg of dried fruit samples were obtained. The method was successfully applied to the determination of trace amounts of cadmium in legumes and dried fruit samples. (orig.)

  20. On-line preconcentration of ultra-trace thallium(I in water samples with titanium dioxide nanoparticles and determination by graphite furnace atomic absorption spectrometry

    Directory of Open Access Journals (Sweden)

    Saeid Asadpour

    2016-11-01

    Full Text Available A new method has been developed for the determination of Tl(I based on simultaneous sorption and preconcentration with a microcolumn packed with TiO2 nanoparticle with a high specific surface area prepared by Sonochemical synthesis prior to its determination by graphite furnace atomic absorption spectrometry (GFAAS. The optimum experimental parameters for preconcentration of thallium, such as elution condition, pH, and sample volume and flow rate have been investigated. Tl(I can be quantitatively retained by TiO2 nanoparticles at pH 9.0, then eluted completely with 1.0 mol L−1 HCl. The adsorption capacity of TiO2 nanoparticles for Tl(I was found to be 25 mg g−1. Also detection limit, precision (RSD, n = 8 and enrichment factor for Tl(I were 87 ng L−1, 6.4% and 100, respectively. The method has been applied for the determination of trace amounts of Tl(I in some environmental water samples with satisfactory results.

  1. Iron K Lines from Accretion Disks: Models for Line Production and Spectroscopic Constraints

    Science.gov (United States)

    Kallman, Timothy; Palmeri, Patrick

    2004-01-01

    Measured profiles of the iron K lines provide important dynamical information about emitting matrial in compact objects. However, much of the modeling work which has been used to infer the location and origin of line observed from AGN and galactic black hole sources is based on highly simplified assumptions about the microphysics of K line emission. In particular, many of the intrinsic line energies, widths and emissivities are based on central-field atomic calculations. We present the results of new calculations of the quantities for the entire iron isonuclear sequence, and demonstrate that the intrinsic K line spectra contain considerably more complexity than has been previously considered. We also present calculations of iron K emission and absorption spectra which include the new data, including the local spectrum radiated from an X-ray illuminated accretion disk. The implications for the interpretation of observed iron K lines from black hole sources will be discussed.

  2. Profiling of gene expression regulated by 17β-estradiol and tamoxifen in estrogen receptor-positive and estrogen receptor-negative human breast cancer cell lines

    Directory of Open Access Journals (Sweden)

    Rangel N

    2017-09-01

    Full Text Available Nelson Rangel,1,2 Victoria E Villegas,2 Milena Rondón-Lagos3 1Department of Medical Sciences, University of Turin, Turin, Italy; 2Faculty of Natural Sciences and Mathematics, Universidad del Rosario, Bogotá, Colombia; 3School of Biological Sciences, Universidad Pedagógica y Tecnológica de Colombia, Tunja, Colombia Abstract: One area of great importance in breast cancer (BC research is the study of gene expression regulated by both estrogenic and antiestrogenic agents. Although many studies have been performed in this area, most of them have only addressed the effects of 17β-estradiol (E2 and tamoxifen (TAM on MCF7 cells. This study aimed to determine the effect of low doses of E2 and TAM on the expression levels of 84 key genes, which are commonly involved in breast carcinogenesis, in four BC cell lines differentially expressing estrogen receptor (ER α and HER2 (MCF7, T47D, BT474, and SKBR3. The results allowed us to determine the expression patterns modulated by E2 and TAM in ERα+ and ERα− cell lines, as well as to identify differences in expression patterns. Although the MCF7 cell line is the most frequently used model to determine gene expression profiles in response to E2 and TAM, the changes in gene expression patterns identified in ERα+ and ERα− cell lines could reflect distinctive properties of these cells. Our results could provide important markers to be validated in BC patient samples, and subsequently used for predicting the outcome in ERα+ and ERα− tumors after TAM or hormonal therapy. Considering that BC is a molecularly heterogeneous disease, it is important to understand how well, and which cell lines, best model that diversity. Keywords: breast cancer, cell lines, 17β-estradiol, tamoxifen, ERα+, ERα−, qPCR

  3. Line profiles of water for the photon dominated region and embedded sources in the S140 region

    NARCIS (Netherlands)

    Poelman, D. R.; Spaans, M.

    H(2)O is a key ingredient in many interstellar environments, like photon dominated regions and star forming clouds. It plays an important role in the oxygen chemistry and can act as a coolant in dense interstellar clouds and shocks. Observations and modelling of water lines thus provide powerful

  4. Determination of tellurium at ultra-trace levels in drinking water by on-line solid phase extraction coupled to graphite furnace atomic absorption spectrometer

    International Nuclear Information System (INIS)

    Pedro, Juana; Stripekis, Jorge; Bonivardi, Adrian; Tudino, Mabel

    2008-01-01

    In this paper, two time-based flow injection (FI) separation pre-concentration systems coupled to graphite furnace atomic absorption spectrometry (GFAAS) for tellurium determination are studied and compared. The first alternative involves the pre-concentration of the analyte onto Dowex 1X8 employed as packaging material of a micro-column inserted in the flow system. The second set-up is based on the co-precipitation of tellurium with La(OH) 3 followed by retention onto XAD resins. Both systems are compared in terms of limit of detection, linear range, RSD%, sample throughput, micro-columns lifetime and aptitude for fully automatic operation. The features of the Dowex system are: 37% efficiency of retention and an enhancement factor of 42 for a pre-concentration time of 180 seconds (sample flow rate = 3 ml min -1 ) with acetic acid elution volumes of 80 μl. The detection limit (3 s) is 7 ng l -1 and the relative standard deviation (n = 7200 ng l -1 ) is 5.8%. The analytical performance of the XAD system is: 72% efficiency of retention and an enhancement factor of 25 for a pre-concentration time of 180 s (sample flow rate = 3 ml min -1 ) with nitric acid elution volumes of 300 μl. The detection limit is 66 ng l -1 and the relative standard deviation (n = 7200 ng l -1 ) is 8.3%. Applications to the determination of tellurium in tap water and the validation of the analytical methodology employing SRM 1643e as certified reference material are shown

  5. On-line preconcentration using a resin functionalized with 3,4-dihydroxybenzoic acid for the determination of trace elements in biological samples by thermospray flame furnace atomic absorption spectrometry

    International Nuclear Information System (INIS)

    Lemos, Valfredo A.; Bezerra, Marcos A.; Amorim, Fabio A.C.

    2008-01-01

    In the present paper, an on-line preconcentration procedure for determination of cadmium, copper and zinc by thermospray flame furnace atomic absorption spectrometry (TS-FF-AAS) is proposed. Amberlite XAD-4 functionalized with 3,4-dihydroxybenzoic acid (XAD4-DHB) packed in a minicolumn was used as sorbent material. The metals were retained on the XAD-DHB resin, from which it could be eluted directly to the thermospray flame furnace system. The detection limits were 28 (Cd), 100 (Cu) and 77 ng L -1 (Zn) for 60 s preconcentration time, at a sample flow rate of 7.0 mL min -1 . Enrichment factors were 102, 91 and 62, for cadmium, copper and zinc, respectively. The procedure has been applied successfully to metal determination in biological standard reference materials

  6. Development of an x-ray beam line at the NSLS for studies in materials science using x-ray absorption spectroscopy. Progress report

    International Nuclear Information System (INIS)

    Sayers, D.E.

    1985-01-01

    This has been an exciting year for our PRT, highlighted by the running of the NSLS x-ray ring in an operational mode beginning in May of this year. Our line X-11A was the first to obtain an experimental spectrum and the first to publish a paper with results from the x-ray ring. These early successes have allowed us to run in an operational mode during the entire time that the x-raying ring itself has been operational. In addition to a number of exciting initial scientific results described, the initial results, particularly in the four crystal mode, have verified our original optical design and demonstrated an improved resolution using the four crystals. This will have a significant impact on near edge (XANES) studies

  7. Baicalin pharmacokinetic profile of absorption process using novel in-vitro model: cytochrome P450 3A4-induced Caco-2 cell monolayers combined with rat intestinal rinse fluids.

    Science.gov (United States)

    Morisaki, Tomoko; Hou, Xiao-Long; Takahashi, Kyoko; Takahashi, Koichi

    2013-10-01

    This study was designed to investigate baicalin (BG) pharmacokinetic profile in absorption process using a new model and evaluate the potentiality as a new model. The effects of BG on intestinal cytochrome P450 3A4 (CYP3A) protein/mRNA expression, activity and permeability glycoprotein (P-gp) were evaluated in CYP3A4-induced Caco-2 cell monolayers or rats. Intestinal rinse fluids (IF) were obtained from rat were added to modified Caco-2 monolayers. Orally administered BG (7 days pretreatment) inhibited intestinal CYP3A activity and protein expression. Baicalein (B) converted from BG by IF was detected in the upper jejunum in a portion-dependent manner. Subsequently, most BG were converted to B in the caecum. In modified Caco-2 monolayers, BG exhibited no effect on CYP3A4 activity or mRNA, whereas B and BG treated with IF inhibited CYP3A4 transcription and activity. Intestinal CYP3A was inhibited following oral administration of BG to rat. Correspondingly, BG-mediated CYP3A inhibition was shown in vitro using modified Caco-2 monolayers treated with IF. Hence, in-vivo intestinal absorption pharmacokinetic was reproduced in vitro. IF is a key determinant of intestinal absorption, and it facilitated inhibition of CYP3A by B, not BG. © 2013 Royal Pharmaceutical Society.

  8. On the front line of primary health care: the profile of community health workers in rural Quechua communities in Peru

    Directory of Open Access Journals (Sweden)

    Zumaran Adriana

    2006-05-01

    Full Text Available Abstract Objective To describe the profile of community health workers – health promoters, traditional birth attendants and traditional healers – in rural Quechua communities from Ayacucho, Peru. Methods Basic quantitative and qualitative information was gathered as part of a community health project implemented between 1997 and 2002 in 40 Andean communities with information from questionnaires, personal interviews and group discussions. Results The majority of current community health workers are men with limited education who are primarily Quechua speakers undertaking their work on a voluntary basis. Health promoters are mostly young, male, high school graduates. There exists a high drop-out rate among these workers. In contrast, traditional healers and traditional birth attendants possess an almost diametrically opposite profile in terms of age, education and drop-out rates, though males still predominate. At the community level the health promoters are the most visible community health workers. Conclusion It is very important to consider and to be aware of the profile of community health workers in order to provide appropriate alternatives when working with these groups as well as with the indigenous population, particularly in terms of culture, language and gender issues.

  9. Properties of QSO Metal-line Absorption Systems at High Redshifts: Nature and Evolution of the Absorbers and New Evidence on Escape of Ionizing Radiation from Galaxies

    Science.gov (United States)

    Boksenberg, Alec; Sargent, Wallace L. W.

    2015-05-01

    Using Voigt-profile-fitting procedures on Keck High Resolution Spectrograph spectra of nine QSOs, we identify 1099 C IV absorber components clumped in 201 systems outside the Lyman forest over 1.6 associated Si IV, C II, Si II and N V where available, we investigate the bulk statistical and ionization properties of the components and systems and find no significant change in redshift for C IV and Si IV while C II, Si II and N V change substantially. The C IV components exhibit strong clustering, but no clustering is detected for systems on scales from 150 km s-1 out to 50,000 km s-1. We conclude that the clustering is due entirely to the peculiar velocities of gas present in the circumgalactic media of galaxies. Using specific combinations of ionic ratios, we compare our observations with model ionization predictions for absorbers exposed to the metagalactic ionizing radiation background augmented by proximity radiation from their associated galaxies and find that the generally accepted means of radiative escape by transparent channels from the internal star-forming sites is spectrally not viable for our stronger absorbers. We develop an active scenario based on runaway stars with resulting changes in the efflux of radiation that naturally enable the needed spectral convergence, and in turn provide empirical indicators of morphological evolution in the associated galaxies. Together with a coexisting population of relatively compact galaxies indicated by the weaker absorbers in our sample, the collective escape of radiation is sufficient to maintain the intergalactic medium ionized over the full range 1.9 National Aeronautics and Space Administration. The Observatory was made possible by the generous financial support of the W. M. Keck Foundation.

  10. Exploring the Time Evolution of Cool Metallic Absorption Features in UV Burst Spectra

    Science.gov (United States)

    Belmes, K.; Madsen, C. A.; DeLuca, E.

    2017-12-01

    UV bursts are compact brightenings in active regions that appear in UV images. They are identified through three spectroscopic features: (1) broadening and intensification of NUV/FUV emission lines, (2) the presence of optically thin Si IV emission, and (3) the presence of absorption features from cool metallic ions. Properties (2) and (3) imply that bursts exist at transition region temperatures (≥ 80,000 K) but are located in the cooler lower chromosphere ( 5,000 K). Their energetic and dynamical properties remain poorly constrained. Improving our understanding of this phenomena could help us further constrain the energetic and dynamical properties of the chromosphere, as well as give us insight into whether or not UV bursts contribute to chromospheric and/or coronal heating. We analyzed the time evolution of UV bursts using spectral data from the Interface Region Imaging Spectrograph (IRIS). We inspected Si IV 1393.8 Å line profiles for Ni II 1393.3 Å absorption features to look for signs of heating. Weakening of absorption features over time could indicate heating of the cool ions above the burst, implying that thermal energy from the burst could rapidly conduct upward through the chromosphere. To detect the spectral profiles corresponding to bursts, we applied a four-parameter Gaussian fit to every profile in each observation and took cuts in parameter space to isolate the bursts. We then manually reviewed the remaining profiles by looking for a statistically significant appearance of Ni II 1393.3 Å absorption. We quantified these absorption features by normalizing the Si IV 1393.8 Å emission profiles and measuring the maximum fractional extinction in each. Our preliminary results indicate that Ni II 1393.3 Å absorption may undergo a cycle of strengthening and weakening throughout a burst's lifetime. However, further investigation is needed for confirmation. This work is supported by the NSF-REU solar physics program at SAO, grant number AGS-1560313.

  11. Possibilities of LA-ICP-MS technique for the spatial elemental analysis of the recent fish scales: Line scan vs. depth profiling

    Energy Technology Data Exchange (ETDEWEB)

    Hola, Marketa [Department of Chemistry, Masaryk University of Brno, Kamenice 5, 625 00 Brno (Czech Republic); Kalvoda, Jiri, E-mail: jkalvoda@centrum.cz [Department of Geological Sciences, Masaryk University of Brno, Kotlarska 2, 611 37 Brno (Czech Republic); Novakova, Hana [Department of Chemistry, Masaryk University of Brno, Kamenice 5, 625 00 Brno (Czech Republic); Skoda, Radek [Department of Geological Sciences, Masaryk University of Brno, Kotlarska 2, 611 37 Brno (Czech Republic); Kanicky, Viktor [Department of Chemistry, Masaryk University of Brno, Kamenice 5, 625 00 Brno (Czech Republic)

    2011-01-01

    LA-ICP-MS and solution based ICP-MS in combination with electron microprobe are presented as a method for the determination of the elemental spatial distribution in fish scales which represent an example of a heterogeneous layered bone structure. Two different LA-ICP-MS techniques were tested on recent common carp (Cyprinus carpio) scales: (a)A line scan through the whole fish scale perpendicular to the growth rings. The ablation crater of 55 {mu}m width and 50 {mu}m depth allowed analysis of the elemental distribution in the external layer. Suitable ablation conditions providing a deeper ablation crater gave average values from the external HAP layer and the collagen basal plate. (b)Depth profiling using spot analysis was tested in fish scales for the first time. Spot analysis allows information to be obtained about the depth profile of the elements at the selected position on the sample. The combination of all mentioned laser ablation techniques provides complete information about the elemental distribution in the fish scale samples. The results were compared with the solution based ICP-MS and EMP analyses. The fact that the results of depth profiling are in a good agreement both with EMP and PIXE results and, with the assumed ways of incorporation of the studied elements in the HAP structure, suggests a very good potential for this method.

  12. New on-line method for water isotope analysis of fluid inclusions in speleothems using laser absorption spectroscopy: Application to stalagmites from Borneo and Switzerland

    Science.gov (United States)

    Affolter, Stéphane; Fleitmann, Dominik; Nele Meckler, Anna; Leuenberger, Markus

    2014-05-01

    Speleothems are recognised as key continental archives for paleoclimate reconstructions. They contain fluid inclusions representing past drip water trapped in the calcite structure. Speleothem can be precisely dated and therefore the oxygen (δ18O) and hydrogen (δD) isotopes of fluid inclusions constitute powerful proxies for paleotemperature or to investigate changes in the moisture source over several interglacial-glacial cycles. To liberate fluid inclusion water and to analyse its isotopic composition, a new online extraction method developed at Bern is used. The principle can be summarised as follows: Prior to crushing, the sample is placed into a copper tube, fixed to the line previously heated to 140° C and flushed with a nitrogen and standard water mixture. Thereafter, the speleothem sample is crushed using a simple hydraulic crushing device and the released water from fluid inclusions is transferred by the nitrogen-standard water mixture flow to a Picarro L1102-i isotopic liquid water and water vapor analyser. The measuring principle is based on wavelength-scanned cavity ring-down spectroscopy (WS-CRDS) technology that allows us to simultaneously monitor hydrogen and oxygen isotopes. Reproducibility of standard water measurements is typically better than 1.5 o for δD and 0.4 o for δ18O. With this method, we successfully analysed δD and δ18O isotopic composition of a stalagmite from Northern Borneo (tropical West Pacific) covering almost two glacial-interglacial cycles from MIS 12 to early MIS 9 (460-330 ka) as well as recent samples from Switzerland and Borneo. These results are used in combination with calcite δ18O to reconstruct paleotemperature. Currently, we are measuring a stalagmite from Milandre cave (Jura, Switzerland) covering the Bølling-Allerød, Younger Dryas cold phase and the Holocene.

  13. Curcumin Effect on the Expressional Profile of OCT4, Nanog and Nucleostemin Genes in AGS (Adenocarcinoma Cancer Cell Line

    Directory of Open Access Journals (Sweden)

    Fahmideh Bagrezaei

    2016-07-01

    Full Text Available Background Curcumin is the natural yellow pigment in turmeric isolated from the rhizome of the plant Curcuma longa. Curcumin inhibits formation and invasive cancer cells and destroys cancer cells resistant to chemotherapeutic drugs. Objectives The purpose of this study was the survey of effects of different concentrations of alcoholic curcumin on the octamer-binding transcription factor 4 (OCT4 Nanog and Nucleostemin genes in the AGS (human gastric adenocarcinoma cell line. Materials and Methods In this experimental study the AGS cell line was cultured in RPMI-1640, supplemented with penicillin/streptomycin (100 U/mL and 100 mg/mL, respectively and 10% fetal bovine serum, at 37°C in a humidified atmosphere of 5% CO2. In 60 - 70% cell confluence, the cells were treated with curcumin concentration (20, 40, 100 μL and incubated for 24, 48 and 72 hours. Finally, total RNA were extracted and cDNA were synthesized and the expression of mentioned genes was detected. The data were analyzed by excel software. Results Expression rate of OCT4A, OCT4B, Nanog and Nucleostemin (GLN3 at concentrations less than 20 μg/mL were reduced but OCT4B1 expression showed increased by hours respectively. Conclusions The results showed that curcumin inhibited cell division; also, this study could be the basis for more extensive studies on the anti-cancer effect of the combined plants.

  14. Drug resistance in colorectal cancer cell lines is partially associated with aneuploidy status in light of profiling gene expression

    DEFF Research Database (Denmark)

    Guo, Jiao; Xu, Shaohang; Huang, Xuanlin

    2016-01-01

    A priority in solving the problem of drug resistance is to understand the molecular mechanism of how a drug induces the resistance response within cells. Because many cancer cells exhibit chromosome aneuploidy, we explored whether changes of aneuploidy status result in drug resistance. Two typical...... colorectal cancer cells, HCT116 and LoVo, were cultured with the chemotherapeutic drugs irinotecan (SN38) or oxaliplatin (QxPt), and the non- and drug-resistant cell lines were selected. Whole exome sequencing (WES) was employed to evaluate the aneuploidy status of these cells, and RNAseq and LC-MS/MS were...... the aneuploidy status in cancer cells, which was partially associated with the acquired drug resistance....

  15. Agronomic characteristics and phytochemical profiles of advanced June-bearing strawberry lines for the northern Canadian climate

    Directory of Open Access Journals (Sweden)

    Zhichun Xie

    2014-02-01

    Full Text Available Eleven advanced strawberry lines (‘SJ011‑10’, ‘SJ0440‑2’, ‘SJ061‑8’, ‘SJ066‑3’, ‘SJ069‑3’, ‘SJ069‑12’, ‘SJ0814‑37’, ‘SJ8518‑11’, ‘K04‑12’, ‘LL0220‑10’ and ‘V151’ were evaluated for their yield, fruit quality, total phenolic content, total antioxidant capacity, and phenolic composition, and were compared with a commercial cultivar (‘Wendy’. The results showed that ‘SJ069‑3’ had excellent soluble solids content, mid-level titratable acidity, low weight loss, and the best firmness among all the cultivars. Higher total antioxidant capacity was found in ‘SJ069‑3’, according to ferric reducing antioxidant power and oxygen radical absorbance capacity assays, an indication that ‘SJ069‑3’ is a promising new cultivar for the fresh market. In addition to rich individual phenolics, ‘SJ061‑8’ had the highest total antioxidant capacity, which was significantly different from the other genotypes, suggesting the potential use of this line as parent material in breeding or as a functional food ingredient. There was a strong relationship between total antioxidant capacity and total phenolic content, according to Folin–Ciocalteu, ferric reducing antioxidant power, and oxygen radical absorbance capacity assays. This study confirms that anthocyanins are major phenolic compounds contributing to the main antioxidant power of strawberries.

  16. Profiling of glycan receptors for minute virus of mice in permissive cell lines towards understanding the mechanism of cell recognition.

    Directory of Open Access Journals (Sweden)

    Sujata Halder

    Full Text Available The recognition of sialic acids by two strains of minute virus of mice (MVM, MVMp (prototype and MVMi (immunosuppressive, is an essential requirement for successful infection. To understand the potential for recognition of different modifications of sialic acid by MVM, three types of capsids, virus-like particles, wild type empty (no DNA capsids, and DNA packaged virions, were screened on a sialylated glycan microarray (SGM. Both viruses demonstrated a preference for binding to 9-O-methylated sialic acid derivatives, while MVMp showed additional binding to 9-O-acetylated and 9-O-lactoylated sialic acid derivatives, indicating recognition differences. The glycans recognized contained a type-2 Galβ1-4GlcNAc motif (Neu5Acα2-3Galβ1-4GlcNAc or 3'SIA-LN and were biantennary complex-type N-glycans with the exception of one. To correlate the recognition of the 3'SIA-LN glycan motif as well as the biantennary structures to their natural expression in cell lines permissive for MVMp, MVMi, or both strains, the N- and O-glycans, and polar glycolipids present in three cell lines used for in vitro studies, A9 fibroblasts, EL4 T lymphocytes, and the SV40 transformed NB324K cells, were analyzed by MALDI-TOF/TOF mass spectrometry. The cells showed an abundance of the sialylated glycan motifs recognized by the viruses in the SGM and previous glycan microarrays supporting their role in cellular recognition by MVM. Significantly, the NB324K showed fucosylation at the non-reducing end of their biantennary glycans, suggesting that recognition of these cells is possibly mediated by the Lewis X motif as in 3'SIA-Le(X identified in a previous glycan microarray screen.

  17. Profiles of spectral lines, magnetic fields and thermodynamical conditions in the X17.2/4B solar flare of October 28, 2003

    Science.gov (United States)

    Lozitsky, V. G.; Baranovsky, E. A.; Lozitska, N. I.; Tarashchuk, V. P.

    2018-03-01

    We analyse the peak phase of the exclusively powerful solar proton flare of October 28, 2003 which had originated in the active region NOAA 0486. For studying the physical conditions in the flare, we used twelve spectral lines including lines from FeI, FeII, and the Hα, Hβ, Hγ, Hδ lines observed with the Echelle spectrograph of the horizontal solar telescope of the Astronomical Observatory of the Taras Shevchenko National University of Kyiv. We found that this flare had a unique Balmer decrement, with the record ratio I (Hβ) / I(Hα) = 1.68 of Hβ and Hα intensities, which is unprecedented for all flares observed. In a place outside sunspots, the effective magnetic field measured by splitting `center of gravity' I ± V profiles was found within the range of 0-200 G in the middle photosphere, till 1200 G in the upper photosphere and the temperature minimum zone and up to 500 G in the chromosphere. The essential broadening of the FeI 5250.2 line versus the FeI 5247.1 one was found indicating the presence of a strong (800-1100 G) `turbulent' field in the middle photosphere. A semi-empirical model of the chromosphere constructed using the algorithms in PANDORA code has an interesting peculiarity, namely, three discrete layers with an increased concentration and / or temperature, including a very dense and thin layer with the following parameters: the concentration of hydrogen nH = 1018 cm3, the thickness Δh = 3-5 km, and a height of h ≈ 1200 km above the photosphere.

  18. Comparison of growth inhibition profiles and mechanisms of apoptosis induction in human colon cancer cell lines by isothiocyanates and indoles from Brassicaceae

    Energy Technology Data Exchange (ETDEWEB)

    Pappa, Gerlinde [Division of Toxicology and Cancer Risk Factors, German Cancer Research Center (DKFZ), 69120 Heidelberg (Germany); Lichtenberg, Maike [Division of Toxicology and Cancer Risk Factors, German Cancer Research Center (DKFZ), 69120 Heidelberg (Germany); Iori, Renato [Consiglio per la Ricerca e la Sperimentazione in Agricoltura, Istituto Sperimentale Colture Industriali, 40129 Bologna (Italy); Barillari, Jessica [Consiglio per la Ricerca e la Sperimentazione in Agricoltura, Istituto Sperimentale Colture Industriali, 40129 Bologna (Italy); Bartsch, Helmut [Division of Toxicology and Cancer Risk Factors, German Cancer Research Center (DKFZ), 69120 Heidelberg (Germany); Gerhaeuser, Clarissa [Division of Toxicology and Cancer Risk Factors, German Cancer Research Center (DKFZ), 69120 Heidelberg (Germany)]. E-mail: c.gerhauser@dkfz.de

    2006-07-25

    The isothiocyanates sulforaphane and PEITC ({beta}-phenethyl isothiocyanate) as well as the indoles indole-3-carbinol and its condensation product 3,3'-diindolylmethane are known to inhibit cancer cell proliferation and induce apoptosis. In this study, we compared the cell growth inhibitory potential of the four compounds on the p53 wild type human colon cancer cell line 40-16 (p53{sup +/+}) and its p53 knockout derivative 379.2 (p53{sup -/-}) (both derived from HCT116). Using sulforhodamin B staining to assess cell proliferation, we found that the isothiocyanates were strongly cytotoxic, whereas the indoles inhibited cell growth in a cytostatic manner. Half-maximal inhibitory concentrations of all four compounds in both cell lines ranged from 5-15 {mu}M after 24, 48 and 72 h of treatment. Apoptosis induction was analyzed by immunoblotting of poly(ADP-ribose)polymerase (PARP). Treatment with sulforaphane (15 {mu}M), PEITC (10 {mu}M), indole-3-carbinol (10 {mu}M) and 3,3'-diindolylmethane (10 {mu}M) induced PARP cleavage after 24 and 48 h in both 40-16 and the 379.2 cell lines, suggestive of a p53-independent mechanism of apoptosis induction. In cultured 40-16 cells, activation of caspase-9 and -7 detected by Western blotting indicated involvement of the mitochondrial pathway. We detected time- and concentration-dependent changes in protein expression of anti-apoptotic Bcl-x{sub L} as well as pro-apoptotic Bax and Bak proteins. Of note is that for sulforaphane only, ratios of pro- to anti-apoptotic Bcl-2 family protein levels directly correlated with apoptosis induction measured by PARP cleavage. Taken together, we demonstrated that the glucosinolate breakdown products investigated in this study have distinct profiles of cell growth inhibition, potential to induce p53-independent apoptosis and to modulate Bcl-2 family protein expression in human colon cancer cell lines.

  19. Optical Analysis of the Oils Obtained from Acrocomia aculeata (Jacq. Lodd: Mapping Absorption-Emission Profiles in an Induced Oxidation Process

    Directory of Open Access Journals (Sweden)

    Ivan P. de Oliveira

    2017-01-01

    Full Text Available Acrocomia aculeata is a palm tree typical of the Brazilian savanna. Oils extracted from the pulp and kernel of Acrocomia aculeata fruits have gained considerable attention mainly due to their nutritional and medicinal features. Despite their potential applications, a detailed analysis of their oxidative stability is still needed. The present study shows a close analysis of the oxidative stability of the oils obtained from the kernel and pulp of Acrocomia aculeata fruits, evaluating the influence of the intrinsic antioxidants and the fatty acid composition on the oil’s thermal stability. A complete characterization of the physical-chemical and optical properties of the oils was performed. The results showed that 66% of the fatty acids present in the pulp oil are unsaturated, while 75% are saturated in the kernel oil. A higher content of intrinsic antioxidants was obtained in the pulp oil, and an induction period (at 110 °C of 65 and 43 h was determined for the pulp and kernel oil, respectively. Additionally, oil absorption increases due to the formation of degradation products, and a new fluorescent compound was formed during the oil oxidation process at 110 °C. Even though the pulp presented a high content of unsaturated fatty acids, the pulp oil was more stable than the kernel oil due to its higher content of intrinsic antioxidant, especially carotenoids. The results also demonstrated that oil oxidation can be optically determined by analyzing the absorption at 232 and 270 nm, as well as the emission at 424 nm.

  20. Correlation between the sub-structure parameters and the manufacturing technologies of metal threads in historical textiles using X-ray line profile analysis

    Energy Technology Data Exchange (ETDEWEB)

    Csiszar, Gabor; Ungar, Tamas [Eoetvoes University Budapest, Department of Materials Physics, Budapest (Hungary); Jaro, Marta [Hungarian National Museum, Budapest (Hungary)

    2013-06-15

    Micro-structure can talk when documentation is missing. In ancient Roman or medieval periods, kings, queens, or just rich people decorated their clothes or even their horse covers richly with miniature jewels or metal threads. The origin or the fabrication techniques of these ancient threads is often unknown. Thirteen thread samples made of gold or gilt silver manufactured during the last sixteen hundred years are investigated for the micro-structure in terms of dislocation density, crystallite size, and planar defects. In a few cases, these features are compared with sub-structure of similar metallic threads prepared in modern, twentieth century workshops. The sub-structure is determined by X-ray line profile analysis, using high resolution diffractograms with negligible instrumental broadening. On the basis of the sub-structure parameters, we attempt to assess the metal-threads manufacturing procedures on samples stemming from the fourth century A.D. until now. (orig.)

  1. Dose-response relationships in gene expression profiles in a harbor seal B lymphoma cell line exposed to 17α-ethinyl estradiol

    Directory of Open Access Journals (Sweden)

    Christine Kleinert

    2017-05-01

    Full Text Available The determination of changes in gene expression profiles with xenobiotic dose will allow identifying biomarkers and modes of toxicant action. The harbor seal (Phoca vitulina 11B7501 B lymphoma cell line was exposed to 1, 10, 100, 1000, 10,000, or 25,000 μg/L 17α-ethinyl estradiol (EE2, the active compound of the contraceptive pill for 24 h. Following exposure, RNA was extracted and transformed into cDNA. Transcript expression in exposed vs. control lymphocytes was analyzed via RT-qPCR to identify genes with altered expression. Our analysis indicates that gene expression for all but the reference gene varied with dose, suggesting that different doses induce distinct physiological responses. These findings demonstrate that RT-qPCR could be used to identify immunotoxicity and relative dose in harbor seal leukocytes.

  2. Comparative Analysis of Anther Transcriptome Profiles of Two Different Rice Male Sterile Lines Genotypes under Cold Stress

    Directory of Open Access Journals (Sweden)

    Bin Bai

    2015-05-01

    Full Text Available Rice is highly sensitive to cold stress during reproductive developmental stages, and little is known about the mechanisms of cold responses in rice anther. Using the HiSeq™ 2000 sequencing platform, the anther transcriptome of photo thermo sensitive genic male sterile lines (PTGMS rice Y58S and P64S (Pei’ai64S were analyzed at the fertility sensitive stage under cold stress. Approximately 243 million clean reads were obtained from four libraries and aligned against the oryza indica genome and 1497 and 5652 differentially expressed genes (DEGs were identified in P64S and Y58S, respectively. Both gene ontology (GO and Kyoto Encyclopedia of Genes and Genomes (KEGG analyses were conducted for these DEGs. Functional classification of DEGs was also carried out. The DEGs common to both genotypes were mainly involved in signal transduction, metabolism, transport, and transcriptional regulation. Most of the DEGs were unique for each comparison group. We observed that there were more differentially expressed MYB (Myeloblastosis and zinc finger family transcription factors and signal transduction components such as calmodulin/calcium dependent protein kinases in the Y58S comparison group. It was also found that ribosome-related DEGs may play key roles in cold stress signal transduction. These results presented here would be particularly useful for further studies on investigating the molecular mechanisms of rice responses to cold stress.

  3. Characterization of the glycosylation profiles of Alzheimer's beta -secretase protein Asp-2 expressed in a variety of cell lines.

    Science.gov (United States)

    Charlwood, J; Dingwall, C; Matico, R; Hussain, I; Johanson, K; Moore, S; Powell, D J; Skehel, J M; Ratcliffe, S; Clarke, B; Trill, J; Sweitzer, S; Camilleri, P

    2001-05-18

    Amyloid 39-42 beta -peptides are the main components of amyloid plaques found in the brain of Alzheimer's disease patients. Amyloid 39-42 beta-peptide is formed from amyloid precursor protein by the sequential action of beta- and gamma-secretases. Asp-2 is a transmembrane aspartic protease expressed in the brain, shown to have beta-secretase activity. Mature Asp-2 has four N-glycosylation sites. In this report we have characterized the carbohydrate structures in this glycoprotein expressed in three different cell lines, namely Chinese hamster ovary, CV-1 origin of SV40, and baculovirus-infected SF9 cells. Biantennary and triantennary oligosaccharides of the "complex" type were released from glycoprotein expressed in the mammalian cells, whereas mannose-rich glycans were identified from glycoprotein synthesized in the baculovirus-infected cells. Site-directed mutagenesis of the asparagine residues at amino acid positions 153, 172, 223, and 354 demonstrate that the protease activity of Asp-2 is dependent on its glycosylation.

  4. Proteomic profiling of eggs from a hybrid abalone and its parental lines: Haliotis discus hannai Ino and Haliotis gigantea.

    Science.gov (United States)

    Di, Guilan; Luo, Xuan; Huang, Miaoqin; Chen, Jun; Kong, Xianghui; Miao, Xiulian; Ke, Caihuan

    2015-12-01

    Proteomic analysis was performed on the eggs of hybrid abalone and their corresponding parental lines. A total of 915 ± 19 stained protein spots were detected from Haliotis discus hannai♀ × H. discus hannai♂ (DD), 935 ± 16 from H. gigantea♀ × H. gigantea♂ (GG) and 923 ± 13 from H. gigantea♀ × H. discus hannai♂ (GD). The spots from DD and GD were clustered together. The distance between DD and GG was maximal by hierarchical cluster analysis. A total of 112 protein gel spots were identified; of these, 59 were abalone proteins. The proteins were involved in major biological processes including energy metabolism, proliferation, apoptosis, signal transduction, immunity, lipid metabolism, electron carrier proteins, protein biosynthesis and decomposition, and cytoskeletal structure. Three of 20 differential expression protein spots involved in energy metabolism exhibited as upregulated in GD, 13 spots exhibited additivity, and four spots exhibited as downregulated in the offspring. Eleven protein spots were expressed at the highest level in DD. The proteins involved in stress responses included superoxide dismutase, peroxiredoxin 6, thioredoxin peroxidase and glutathione-S-transferase. Two of seven differential expression protein spots involved in response to stress exhibited as upregulated in GD, three exhibited additivity, and two exhibited as downregulated. These results might suggest that proteomic approaches are suitable for the analysis of hybrids and the functional prediction of abalone hybridization. © 2015 Stichting International Foundation for Animal Genetics.

  5. Photoelectron spectra of N2 +: Rotational line profiles studied with He;I endash excited angle-resolved spectroscopy and with synchrotron radiation

    International Nuclear Information System (INIS)

    Oehrwall, G.; Baltzer, P.; Bozek, J.

    1999-01-01

    We have recorded angle-resolved He I photoelectron spectra of the three outermost valence states in N 2 + , with high enough resolution to observe rotational line profiles. For the two Σ states, the X 2 Σ g + and the B 2 Σ u + , we found that the rotational branches corresponding to different changes in rotational quantum number can differ dramatically in β value. The well-known difference in β value for the ν=0 and ν=1 vibrations of the X 2 Σ g + state was found to be due to different rotational branching ratios and also different β values of the rotational branches. For the ν=0 endash 2 vibrations of the A 2 Π u state, the β value difference between rotational branches is much less pronounced than in the X and B states. We have also recorded synchrotron-radiation-excited photoelectron spectra of the ν=0 vibrational peaks of the X 2 Σ g + and B 2 Σ u + states where rotational line profiles are resolved. The intensities of the rotational branches were studied as function of photon energy, the X state between 23 and 65 eV, and the B state between 23 and 45 eV. The results for the X state have recently been presented in a Letter [G. Oehrwall, P. Baltzer, and J. Bozek, Phys. Rev. Lett. 81, 546, 1998]. The rotational branching ratios of the two states have very different behaviors as functions of photon energy. The relative intensities of the rotational branches in the X state change significantly over the studied energy range. The 3σ g →kσ u shape resonance apparently gives rise to a non-Franck-Condon-like behavior for the rotational branching ratio of the X state. In the B state, the rotational branching ratios remain essentially constant over the studied energy range. copyright 1999 The American Physical Society

  6. Evaluation of alternate lines of Fe for sequential multi-element determination of Cu, Fe, Mn and Zn in soil extracts by high-resolution continuum source flame atomic absorption spectrometry

    International Nuclear Information System (INIS)

    Luiz Raposo, Jorge; Ruella de Oliveira, Silvana; Caldas, Naise Mary; Neto, Jose Anchieta Gomes

    2008-01-01

    The usefulness of the secondary line at 252.744 nm and the approach of side pixel registration were evaluated for the development of a method for sequential multi-element determination of Cu, Fe, Mn and Zn in soil extracts by high-resolution continuum source flame atomic absorption spectrometry (HR-CS FAAS). The influence of side pixel registration on the sensitivity and linearity was investigated by measuring at wings (248.325, 248.323, 248.321, 248.329, and 248.332 nm) of the main line for Fe at 248.327 nm. For the secondary line at 252.744 nm or side pixel registration at 248.325 nm, main lines for Cu (324.754 nm), Mn (279.482 nm) and Zn (213.875 nm), sample flow-rate of 5.0 mL min -1 and calibration by matrix matching, analytical curves in the 0.2-1.0 mg L -1 Cu, 1.0-20.0 mg L -1 Fe, 0.2-2.0 mg L -1 Mn, 0.1-1.0 mg L -1 Zn ranges were obtained with linear correlations better than 0.998. The proposed method was applied to seven soil samples and two soil reference materials (IAC 277; IAC 280). Results were in agreement at a 95% confidence level (paired t-test) with reference values. Recoveries of analytes added to soil extracts containing 0.15 and 0.30 mg L -1 Cu, 7.0 and 14 mg L -1 Fe, 0.60 and 1.20 mg L -1 Mn, 0.07 and 0.15 mg L -1 Zn, varied within the 94-99, 92-98, 93-101, and 93-103% intervals, respectively. The relative standard deviations (n = 12) were 2.7% (Cu), 1.4% (Fe - 252.744 nm), 5.7% (Fe - 248.325 nm), 3.2% (Mn) and 2.8% (Zn) for an extract containing 0.35 mg L -1 Cu, 14 mg L -1 Fe, 1.1 mg L -1 Mn and 0.12 mg L -1 Zn. Detection limits were 5.4 μg L -1 Cu, 55 μg L -1 Fe (252.744 nm), 147 μg L -1 Fe (248.325 nm), 3.0 μg L -1 Mn and 4.2 μg L -1 Zn

  7. Induced Mutagenesis inUGT74S1Gene Leads to Stable New Flax Lines with Altered Secoisolariciresinol Diglucoside (SDG) Profiles.

    Science.gov (United States)

    Fofana, Bourlaye; Ghose, Kaushik; Somalraju, Ashok; McCallum, Jason; Main, David; Deyholos, Michael K; Rowland, Gordon G; Cloutier, Sylvie

    2017-01-01

    Flax secoisolariciresinol (SECO) diglucoside (SDG) lignan is an emerging natural product purported to prevent chronic diseases in humans. SECO, the aglycone form of SDG, has shown higher intestinal cell absorption but it is not accumulated naturally in planta . Recently, we have identified and characterized a UDP-glucosyltransferase gene, UGT74S1 , that glucosylates SECO into its monoglucoside (SMG) and SDG forms when expressed in yeast. However, whether this gene is unique in controlling SECO glucosylation into SDG in planta is unclear. Here, we report on the use of UGT74S1 in reverse and forward genetics to characterize an ethyl methane sulfonate (EMS) mutagenized flax population from cultivar CDC Bethune and consisting of 1996 M2 families. EMS mutagenesis generated 73 SNP variants causing 79 mutational events in the UGT74S1 exonic regions of 93 M2 families. The mutation frequency in the exonic regions was determined to be one per 28 Kb. Of these mutations, 13 homozygous missense mutations and two homozygous nonsense mutations were observed and all were transmitted into the M3 and M4 generations. Forward genetics screening of the population showed homozygous nonsense mutants completely lacking SDG biosynthesis while the production of SMG was observed only in a subset of the M4 lines. Heterozygous or homozygous M4 missense mutants displayed a wide range of SDG levels, some being greater than those of CDC Bethune. No additional deleterious mutations were detected in these mutant lines using a panel of 10 other genes potentially involved in the lignan biosynthesis. This study provides further evidence that UGT74S1 is unique in controlling SDG formation from SECO and this is the first report of non-transgenic flax germplasm with simultaneous knockout of SDG and presence of SMG in planta .

  8. Differential protein expression profile in the hypothalamic GT1-7 cell line after exposure to anabolic androgenic steroids.

    Science.gov (United States)

    Martínez-Rivera, Freddyson J; Pérez-Laspiur, Juliana; Santiago-Gascot, María E; Alemán-Reyes, Abner G; García-Santiago, Emanuel; Rodríguez-Pérez, Yolanda; Calo-Guadalupe, Cristhian; Otero-Pagán, Inelia; Ayala-Pagán, Roxsana N; Martínez, Magdiel; Cantres-Rosario, Yisel M; Meléndez, Loyda M; Barreto-Estrada, Jennifer L

    2017-01-01

    The abuse of anabolic androgenic steroids (AAS) has been considered a major public health problem during decades. Supraphysiological doses of AAS may lead to a variety of neuroendocrine problems. Precisely, the hypothalamic-pituitary-gonadal (HPG) axis is one of the body systems that is mainly influenced by steroidal hormones. Fluctuations of the hormonal milieu result in alterations of reproductive function, which are made through changes in hypothalamic neurons expressing gonadotropin-releasing hormone (GnRH). In fact, previous studies have shown that AAS modulate the activity of these neurons through steroid-sensitive afferents. To increase knowledge about the cellular mechanisms induced by AAS in GnRH neurons, we performed proteomic analyses of the murine hypothalamic GT1-7 cell line after exposure to 17α-methyltestosterone (17α-meT; 1 μM). These cells represent a good model for studying regulatory processes because they exhibit the typical characteristics of GnRH neurons, and respond to compounds that modulate GnRH in vivo. Two-dimensional difference in gel electrophoresis (2D-DIGE) and mass spectrometry analyses identified a total of 17 different proteins that were significantly affected by supraphysiological levels of AAS. Furthermore, pathway analyses showed that modulated proteins were mainly associated to glucose metabolism, drug detoxification, stress response and cell cycle. Validation of many of these proteins, such as GSTM1, ERH, GAPDH, PEBP1 and PDIA6, were confirmed by western blotting. We further demonstrated that AAS exposure decreased expression of estrogen receptors and GnRH, while two important signaling pathway proteins p-ERK, and p-p38, were modulated. Our results suggest that steroids have the capacity to directly affect the neuroendocrine system by modulating key cellular processes for the control of reproductive function.

  9. Differential protein expression profile in the hypothalamic GT1-7 cell line after exposure to anabolic androgenic steroids.

    Directory of Open Access Journals (Sweden)

    Freddyson J Martínez-Rivera

    Full Text Available The abuse of anabolic androgenic steroids (AAS has been considered a major public health problem during decades. Supraphysiological doses of AAS may lead to a variety of neuroendocrine problems. Precisely, the hypothalamic-pituitary-gonadal (HPG axis is one of the body systems that is mainly influenced by steroidal hormones. Fluctuations of the hormonal milieu result in alterations of reproductive function, which are made through changes in hypothalamic neurons expressing gonadotropin-releasing hormone (GnRH. In fact, previous studies have shown that AAS modulate the activity of these neurons through steroid-sensitive afferents. To increase knowledge about the cellular mechanisms induced by AAS in GnRH neurons, we performed proteomic analyses of the murine hypothalamic GT1-7 cell line after exposure to 17α-methyltestosterone (17α-meT; 1 μM. These cells represent a good model for studying regulatory processes because they exhibit the typical characteristics of GnRH neurons, and respond to compounds that modulate GnRH in vivo. Two-dimensional difference in gel electrophoresis (2D-DIGE and mass spectrometry analyses identified a total of 17 different proteins that were significantly affected by supraphysiological levels of AAS. Furthermore, pathway analyses showed that modulated proteins were mainly associated to glucose metabolism, drug detoxification, stress response and cell cycle. Validation of many of these proteins, such as GSTM1, ERH, GAPDH, PEBP1 and PDIA6, were confirmed by western blotting. We further demonstrated that AAS exposure decreased expression of estrogen receptors and GnRH, while two important signaling pathway proteins p-ERK, and p-p38, were modulated. Our results suggest that steroids have the capacity to directly affect the neuroendocrine system by modulating key cellular processes for the control of reproductive function.

  10. Models of Emission-Line Profiles and Spectral Energy Distributions to Characterize the Multi-Frequency Properties of Active Galactic Nuclei

    Directory of Open Access Journals (Sweden)

    Giovanni La Mura

    2017-11-01

    Full Text Available The spectra of active galactic nuclei (AGNs are often characterized by a wealth of emission lines with different profiles and intensity ratios that lead to a complicated classification. Their electromagnetic radiation spans more than 10 orders of magnitude in frequency. In spite of the differences between various classes, the origin of their activity is attributed to a combination of emitting components, surrounding an accreting supermassive black hole (SMBH, in the unified model. Currently, the execution of sky surveys, with instruments operating at various frequencies, provides the possibility to detect and to investigate the properties of AGNs on very large statistical samples. As a result of the spectroscopic surveys that allow the investigation of many objects, we have the opportunity to place new constraints on the nature and evolution of AGNs. In this contribution, we present the results obtained by working on multi-frequency data, and we discuss their relations with the available optical spectra. We compare our findings with the AGN unified model predictions, and we present a revised technique to select AGNs of different types from other line-emitting objects. We discuss the multi-frequency properties in terms of the innermost structures of the sources.

  11. High-temperature measurements of methane and acetylene using quantum cascade laser absorption near 8μm

    KAUST Repository

    Sajid, M.B.

    2015-04-01

    The mid-infrared wavelength region near 8 mu m contains absorption bands of several molecules such as water vapor, hydrogen peroxide, nitrous oxide, methane and acetylene. A new laser absorption sensor based on the v(4) band of methane and the v(4)+v(5) band of acetylene is reported for interference-free, time-resolved measurements under combustion-relevant conditions. A detailed line-selection procedure was used to identify optimum transitions. Methane and acetylene were measured at the line centers of Q12 (1303.5 cm(-1)) and P23 (1275.5 cm(-1)) transitions, respectively. High-temperature absorption cross sections of methane and acetylene were measured at peaks (on-line) and valleys (off-line) of the selected absorption transitions. The differential absorption strategy was employed to eliminate interference absorption from large hydrocarbons. Experiments were performed behind reflected shock waves over a temperature range of 1200-2200 K, between pressures of 1-4 atm. The diagnostics were then applied to measure the respective species time-history profiles during the shock-heated pyrolysis of n-pentane. (C) 2015 Elsevier Ltd. All rights reserved.

  12. Application of Box-Behnken design in the optimisation of an on-line pre-concentration system using knotted reactor for cadmium determination by flame atomic absorption spectrometry

    International Nuclear Information System (INIS)

    Souza, Anderson S.; Santos, Walter N.L. dos; Ferreira, Sergio L.C.

    2005-01-01

    The present paper proposes an on-line pre-concentration system for cadmium determination in drinking water using flame atomic absorption spectrometry (FAAS). Cadmium(II) ions are retained as 1-(2-pyridylazo)-2-naphthol (PAN) complex at the walls of a knotted reactor, followed of elution using hydrochloric acid solution. The optimization was performed in two steps using factorial design for preliminary evaluation and a Box-Behnken design for determination of the critical experimental conditions. The variables involved were: sampling flow-rate, reagent concentration, pH and buffer concentration, and as response the analytical signal (absorbance). The validation process was performed considering the parameters: linearity and other characteristics of the calibration curve, analytical features of on-line pre-concentration system, precision, effect of other ions in the pre-concentration system and accuracy. Using the optimized experimental conditions, the procedure allows cadmium determination with a detection limit (3 σ / S) of 0.10 μg L -1 , a quantification limit (10 σ / S) of 0.33 μg L -1 , and a precision, calculated as relative standard deviation (RSD) of 2.7% (n = 7) and 2.4% (n = 7) for cadmium concentrations of 5 and 25 μg L -1 , respectively. A pre-concentration factor of 18 and a sampling frequency of 48 h -1 were obtained. The recovery for cadmium in the presence of several ions demonstrated that this procedure could be applied for the analysis of water samples. The method was applied for cadmium determination in drinking water samples collected in Salvador City, Brazil. The cadmium concentrations found in five samples were lower than the maximum permissible levels established by the World Health Organization

  13. Differentially expressed genes during spontaneous lytic switch of Marek's disease virus in lymphoblastoid cell lines determined by global gene expression profiling.

    Science.gov (United States)

    Mwangi, William N; Vasoya, Deepali; Kgosana, Lydia B; Watson, Mick; Nair, Venugopal

    2017-04-01

    Marek's disease virus (MDV), an alphaherpesvirus of poultry, causes Marek's disease and is characterized by visceral CD4+TCRαβ+ T-cell lymphomas in susceptible hosts. Immortal cell lines harbouring the viral genome have been generated from ex vivo cultures of MD tumours. As readily available sources of large numbers of cells, MDV-transformed lymphoblastoid cell lines (LCLs) are extremely valuable for studies of virus-host interaction. While the viral genome in most cells is held in a latent state, minor populations of cells display spontaneous reactivation identifiable by the expression of lytic viral genes. Spontaneous reactivation in these cells presents an opportunity to investigate the biological processes involved in the virus reactivation. For detailed characterization of the molecular events associated with reactivation, we used two lymphoblastoid cell lines derived from lymphomas induced by pRB1B-UL47eGFP, a recombinant MDV engineered to express enhanced green fluorescent protein (EGFP) fused with the UL47. We used fluorescence-activated cell sorting to purify the low-frequency EGFP-positive cells with a spontaneously activating viral genome from the majority EGFP-negative cells and analysed their gene expression profiles by RNA-seq using Illumina HiSeq2500. Ingenuity pathway analysis on more than 2000 differentially expressed genes between the lytically infected (EGFP-positive) and latently infected (EGFP-negative) cell populations identified the biological pathways involved in the reactivation. Virus-reactivating cells exhibited differential expression of a significant number of viral genes, with hierarchical differences in expression levels. Downregulation of a number of host genes including those directly involved in T-cell activation, such as CD3, CD28, ICOS and phospholipase C, was also noticed in the LCL undergoing lytic switch.

  14. Gene expression profiling of breast tumor cell lines to predict for therapeutic response to microtubule-stabilizing agents.

    Science.gov (United States)

    Kadra, Gais; Finetti, Pascal; Toiron, Yves; Viens, Patrice; Birnbaum, Daniel; Borg, Jean-Paul; Bertucci, François; Gonçalves, Anthony

    2012-04-01

    Microtubule-targeting agents, including taxanes (Tax) and ixabepilone (Ixa), are important components of modern breast cancer chemotherapy regimens, but no molecular parameter is currently available that can predict for their efficiency. We sought to develop pharmacogenomic predictors of Tax- and Ixa-response from a large panel of human breast tumor cell lines (BTCL), then to evaluate their performance in clinical samples. Thirty-two BTCL, representative of the molecular diversity of breast cancers (BC), were treated in vitro with Tax (paclitaxel (Pac), docetaxel (Doc)), and ixabepilone (Ixa), then classified as drug-sensitive or resistant according to their 50% inhibitory concentrations (IC50s). Baseline gene expression data were obtained using Affymetrix U133 Plus 2.0 human oligonucleotide microarrays. Gene expression set (GES) predictors of response to taxanes were derived, then tested for validation internally and in publicly available gene expression datasets. In vitro IC50s of Pac and Doc were almost identical, whereas some Tax-resistant BTCL retained sensitivity to Ixa. GES predictors for Tax-sensitivity (333 genes) and Ixa-sensitivity (79 genes) were defined. They displayed a limited number of overlapping genes. Both were validated by leave-n-out cross-validation (n = 4; for overall accuracy (OA), P = 0.028 for Tax, and P = 0.0005 for Ixa). The GES predictor of Tax-sensitivity was tested on publicly available external datasets and significantly predicted Pac-sensitivity in 16 BTCL (P = 0.04 for OA), and pathological complete response to Pac-based neoadjuvant chemotherapy in BC patients (P = 0.0045 for OA). Applying Tax and Ixa-GES to a dataset of clinically annotated early BC patients identified subsets of tumors with potentially distinct phenotypes of drug sensitivity: predicted Ixa-sensitive/Tax-resistant BC were significantly (P Tax-sensitive BC. Genomic predictors for Tax- and Ixa-sensitivity can be derived from BTCL and may be helpful for better

  15. The End of the Lines for OX 169: No Binary Broad-Line Region

    Science.gov (United States)

    Halpern, J. P.; Eracleous, M.

    2000-03-01

    We show that unusual Balmer emission-line profiles of the quasar OX 169, frequently described as either self-absorbed or double peaked, are actually neither. The effect is an illusion resulting from two coincidences. First, the forbidden lines are quite strong and broad. Consequently, the [N II] λ6583 line and the associated narrow-line component of Hα present the appearance of twin Hα peaks. Second, the redshift of 0.2110 brings Hβ into coincidence with Na I D at zero redshift, and ISM absorption in Na I D divides the Hβ emission line. In spectra obtained over the past decade, we see no substantial change in the character of the line profiles and no indication of intrinsic double-peaked structure. The Hγ, Mg II, and Lyα emission lines are single peaked, and all of the emission-line redshifts are consistent once they are correctly attributed to their permitted and forbidden-line identifications. A systematic shift of up to 700 km s-1 between broad and narrow lines is seen, but such differences are common and could be due to gravitational and transverse redshift in a low-inclination disk. Stockton & Farnham had called attention to an apparent tidal tail in the host galaxy of OX 169 and speculated that a recent merger had supplied the nucleus with a coalescing pair of black holes that was now revealing its existence in the form of two physically distinct broad-line regions. Although there is no longer any evidence for two broad emission-line regions in OX 169, binary black holes should form frequently in galaxy mergers, and it is still worthwhile to monitor the radial velocities of emission lines that could supply evidence of their existence in certain objects.

  16. Novel preconcentration technique for on-line coupling to high-speed narrow-bore capillary gas chromatography: sample enrichment by equilibrium (ab)sorption. II. Coupling to a portable micro gas chromatograph.

    Science.gov (United States)

    Tuan, H P; Janssen, H G; Cramers, C A; Mussche, P; Lips, J; Wilson, N; Handley, A

    1997-12-12

    The technique of equilibrium (ab)sorption has been proven to be a powerful method for preconcentration of gaseous samples for high-speed narrow-bore capillary gas chromatography (GC) in general and field-portable GC instruments, often referred as micro GCs, in particular. Using a simple experimental set-up equipped with an open-tubular enrichment column it is possible to produce a homogeneously enriched sample plug, allowing reproducible injections of an enriched sample into the micro GC. Using a non-polar trapping column enrichment factors found for n-alkanes in the range of C7 to C10 ranged from 15 to 150 and agree well with calculated values. Using a highly retentive Thermocap column, the enrichment factor observed for heptane was above 500. As the use of this new preconcentration method requires only minimum modification of the micro GC, the chromatographic performance of the instrument was not compromised by direct coupling to the preconcentration device. Examples of on-line enrichment with portable micro GC analysis of VOCs from air are shown. These examples clearly demonstrate the potentials of the new method in field analysis.

  17. Nucleation and growth of surfactant-passivated CdS and HgS nanoparticles: Time-dependent absorption and luminescence profiles

    Science.gov (United States)

    Mehta, S. K.; Kumar, Sanjay; Chaudhary, Savita; Bhasin, K. K.

    2010-01-01

    In this study, we have monitored the formation of CdS and HgS nanoparticles (NPs) using a precipitation method in the presence of surface-active agents. Three surfactants were tested to analyze the dependence of various parameters such as size, growth rate, photoluminescence (PL) emission and polydispersity of NPs on surfactant structure. Optical absorption spectroscopy was mainly used to estimate the optical bandgap and the size of NPs. The surfactant-induced quenching of PL intensity was found to be consistent with the different tendencies of the surfactants to act as Lewis acids towards these surfaces. The time-evolution of the absorbance suggested that the nucleation and growth rates markedly vary in a first-order fashion w.r.t. Cd2+ and Hg2+ salt concentration in excess of sulfide ions. The differences in the stabilization ability of the surfactants are discussed in reference to their structure-dependent adsorption behavior onto the particles. The comparative aspects of the different properties of CdS and HgS NPs prepared with identical methodology are presented in terms of metal cation-surfactant interactions. Changes in UV-vis and PL spectra during nucleation and growth of NPs were used to establish the possible mechanisms for the adsorption of surfactant molecules on the particle surface to restrict the unlimited growth.In this study, we have monitored the formation of CdS and HgS nanoparticles (NPs) using a precipitation method in the presence of surface-active agents. Three surfactants were tested to analyze the dependence of various parameters such as size, growth rate, photoluminescence (PL) emission and polydispersity of NPs on surfactant structure. Optical absorption spectroscopy was mainly used to estimate the optical bandgap and the size of NPs. The surfactant-induced quenching of PL intensity was found to be consistent with the different tendencies of the surfactants to act as Lewis acids towards these surfaces. The time-evolution of the absorbance

  18. O Star Wind Mass-Loss Rates and Shock Physics from X-ray Line Profiles in Archival XMM RGS Data

    Science.gov (United States)

    Cohen, David

    O stars are characterized by their dense, supersonic stellar winds. These winds are the site of X-ray emission from shock-heated plasma. By analyzing high-resolution X-ray spectra of these O stars, we can learn about the wind-shock heating and X-ray production mechanism. But in addition, the X-rays can also be used to measure the mass-loss rate of the stellar wind, which is a key observational quantity whose value affects stellar evolution and energy, momentum, and mass input to the Galactic interstellar medium. We make this X-ray based mass-loss measurement by analyzing the profile shapes of the X-ray emission lines observed at high resolution with the Chandra and XMM-Newton grating spectrometers. One advantage of our method is that it is insensitive to small-scale clumping that affects density-squared diagnostics. We are applying this analysis technique to O stars in the Chandra archive, and are finding mass-loss rates lower than those traditionally assumed for these O stars, and in line with more recent independent determinations that do account for clumping. By extending this analysis to the XMM RGS data archive, we will make significant contributions to the understanding of both X-ray production in O stars and to addressing the issue of the actual mass-loss rates of O stars. The XMM RGS data archive provides several extensions and advantages over the smaller Chandra HETGS archive: (1) there are roughly twice as many O and early B stars in the XMM archive; (2) the longer wavelength response of the RGS provides access to diagnostically important lines of nitrogen and carbon; (3) the very long, multiple exposures of zeta Pup provide the opportunity to study this canonical O supergiant's X-ray spectrum in unprecedented detail, including looking at the time variability of X-ray line profiles. Our research team has developed a sophisticated empirical line profile model as well as a computational infrastructure for fitting the model to high-resolution X-ray spectra

  19. Comparative study on intestinal metabolism and absorption in vivo of ginsenosides in sulphur-fumigated and non-fumigated ginseng by ultra performance liquid chromatography quadruple time-of-flight mass spectrometry based chemical profiling approach.

    Science.gov (United States)

    Zhu, He; Shen, Hong; Xu, Jun; Xu, Jin-Di; Zhu, Ling-Ying; Wu, Jie; Chen, Hu-Biao; Li, Song-Lin

    2015-04-01

    Our previous study indicated that sulphur-fumigation of ginseng in post-harvest handling processes could induce chemical transformation of ginsenosides to generate multiple ginsenoside sulphur derivatives. In this study, the influence of sulphur-fumigation on intestinal metabolism and absorption in vivo of ginsenosides in ginseng was sequentially studied. The intestinal metabolic and absorbed profiles of ginsenosides in rats after intra-gastric (i.g.) administration of sulphur-fumigated ginseng (SFG) and non-fumigated ginseng (NFG) were comparatively characterized by a newly established ultra performance liquid chromatography quadruple time-of-flight mass spectrometry (UPLC-QTOF-MS/MS) with electrospray ionization negative (ESI-) mode. A novel strategy based on the characteristic product ions and fragmentation pathways of different types of aglycones (saponin skeletons) and glycosyl moieties was proposed and successfully applied to rapid structural identification of ginsenoside sulphur derivatives and relevant metabolites. In total, 18 ginsenoside sulphur derivatives and 26 ginsenoside sulphur derivative metabolites in the faeces together with six ginsenoside sulphur derivatives in the plasma were identified in the SFG-administrated group but not in the NFG-administrated group. The results clearly demonstrated that the intestinal metabolic and absorbed profiles of ginsenosides in sulphur-fumigated and non-fumigated ginseng were quite different, which inspired that sulphur-fumigation of ginseng should not be recommended before the bioactivity and toxicity of the ginsenoside sulphur derivatives were systematically evaluated. Copyright © 2014 John Wiley & Sons, Ltd.

  20. Rapidly variable relatvistic absorption

    Science.gov (United States)

    Parker, M.; Pinto, C.; Fabian, A.; Lohfink, A.; Buisson, D.; Alston, W.; Jiang, J.

    2017-10-01

    I will present results from the 1.5Ms XMM-Newton observing campaign on the most X-ray variable AGN, IRAS 13224-3809. We find a series of nine absorption lines with a velocity of 0.24c from an ultra-fast outflow. For the first time, we are able to see extremely rapid variability of the UFO features, and can link this to the X-ray variability from the inner accretion disk. We find a clear flux dependence of the outflow features, suggesting that the wind is ionized by increasing X-ray emission.

  1. Metabolic profiling of two maize (Zea mays L.) inbred lines inoculated with the nitrogen fixing plant-interacting bacteria Herbaspirillum seropedicae and Azospirillum brasilense.

    Science.gov (United States)

    Brusamarello-Santos, Liziane Cristina; Gilard, Françoise; Brulé, Lenaïg; Quilleré, Isabelle; Gourion, Benjamin; Ratet, Pascal; Maltempi de Souza, Emanuel; Lea, Peter J; Hirel, Bertrand

    2017-01-01

    Maize roots can be colonized by free-living atmospheric nitrogen (N2)-fixing bacteria (diazotrophs). However, the agronomic potential of non-symbiotic N2-fixation in such an economically important species as maize, has still not been fully exploited. A preliminary approach to improve our understanding of the mechanisms controlling the establishment of such N2-fixing associations has been developed, using two maize inbred lines exhibiting different physiological characteristics. The bacterial-plant interaction has been characterized by means of a metabolomic approach. Two established model strains of Nif+ diazotrophic bacteria, Herbaspirillum seropedicae and Azospirillum brasilense and their Nif- couterparts defficient in nitrogenase activity, were used to evaluate the impact of the bacterial inoculation and of N2 fixation on the root and leaf metabolic profiles. The two N2-fixing bacteria have been used to inoculate two genetically distant maize lines (FV252 and FV2), already characterized for their contrasting physiological properties. Using a well-controlled gnotobiotic experimental system that allows inoculation of maize plants with the two diazotrophs in a N-free medium, we demonstrated that both maize lines were efficiently colonized by the two bacterial species. We also showed that in the early stages of plant development, both bacterial strains were able to reduce acetylene, suggesting that they contain functional nitrogenase activity and are able to efficiently fix atmospheric N2 (Fix+). The metabolomic approach allowed the identification of metabolites in the two maize lines that were representative of the N2 fixing plant-bacterial interaction, these included mannitol and to a lesser extend trehalose and isocitrate. Whilst other metabolites such as asparagine, although only exhibiting a small increase in maize roots following bacterial infection, were specific for the two Fix+ bacterial strains, in comparison to their Fix- counterparts. Moreover, a number

  2. Comparative transcriptome profiling of the fertile and sterile flower buds of a dominant genic male sterile line in sesame (Sesamum indicum L.).

    Science.gov (United States)

    Liu, Hongyan; Tan, Mingpu; Yu, Haijuan; Li, Liang; Zhou, Fang; Yang, Minmin; Zhou, Ting; Zhao, Yingzhong

    2016-11-10

    Sesame (Sesamu