WorldWideScience

Sample records for 3d computational analysis

  1. Advanced computational tools for 3-D seismic analysis

    Energy Technology Data Exchange (ETDEWEB)

    Barhen, J.; Glover, C.W.; Protopopescu, V.A. [Oak Ridge National Lab., TN (United States)] [and others

    1996-06-01

    The global objective of this effort is to develop advanced computational tools for 3-D seismic analysis, and test the products using a model dataset developed under the joint aegis of the United States` Society of Exploration Geophysicists (SEG) and the European Association of Exploration Geophysicists (EAEG). The goal is to enhance the value to the oil industry of the SEG/EAEG modeling project, carried out with US Department of Energy (DOE) funding in FY` 93-95. The primary objective of the ORNL Center for Engineering Systems Advanced Research (CESAR) is to spearhead the computational innovations techniques that would enable a revolutionary advance in 3-D seismic analysis. The CESAR effort is carried out in collaboration with world-class domain experts from leading universities, and in close coordination with other national laboratories and oil industry partners.

  2. Analysis of bite marks in foodstuffs by computer tomography (cone beam CT)--3D reconstruction.

    Science.gov (United States)

    Marques, Jeidson; Musse, Jamilly; Caetano, Catarina; Corte-Real, Francisco; Corte-Real, Ana Teresa

    2013-12-01

    The use of three-dimensional (3D) analysis of forensic evidence is highlighted in comparison with traditional methods. This three-dimensional analysis is based on the registration of the surface from a bitten object. The authors propose to use Cone Beam Computed Tomography (CBCT), which is used in dental practice, in order to study the surface and interior of bitten objects and dental casts of suspects. In this study, CBCT is applied to the analysis of bite marks in foodstuffs, which may be found in a forensic case scenario. 6 different types of foodstuffs were used: chocolate, cheese, apple, chewing gum, pizza and tart (flaky pastry and custard). The food was bitten into and dental casts of the possible suspects were made. The dental casts and bitten objects were registered using an x-ray source and the CBCT equipment iCAT® (Pennsylvania, EUA). The software InVivo5® (Anatomage Inc, EUA) was used to visualize and analyze the tomographic slices and 3D reconstructions of the objects. For each material an estimate of its density was assessed by two methods: HU values and specific gravity. All the used materials were successfully reconstructed as good quality 3D images. The relative densities of the materials in study were compared. Amongst the foodstuffs, the chocolate had the highest density (median value 100.5 HU and 1,36 g/cm(3)), while the pizza showed to have the lowest (median value -775 HU and 0,39 g/cm(3)), on both scales. Through tomographic slices and three-dimensional reconstructions it was possible to perform the metric analysis of the bite marks in all the foodstuffs, except for the pizza. These measurements could also be obtained from the dental casts. The depth of the bite mark was also successfully determined in all the foodstuffs except for the pizza. Cone Beam Computed Tomography has the potential to become an important tool for forensic sciences, namely for the registration and analysis of bite marks in foodstuffs that may be found in a crime

  3. Computer-assisted 3D kinematic analysis of all leg joints in walking insects.

    Directory of Open Access Journals (Sweden)

    John A Bender

    Full Text Available High-speed video can provide fine-scaled analysis of animal behavior. However, extracting behavioral data from video sequences is a time-consuming, tedious, subjective task. These issues are exacerbated where accurate behavioral descriptions require analysis of multiple points in three dimensions. We describe a new computer program written to assist a user in simultaneously extracting three-dimensional kinematics of multiple points on each of an insect's six legs. Digital video of a walking cockroach was collected in grayscale at 500 fps from two synchronized, calibrated cameras. We improved the legs' visibility by painting white dots on the joints, similar to techniques used for digitizing human motion. Compared to manual digitization of 26 points on the legs over a single, 8-second bout of walking (or 106,496 individual 3D points, our software achieved approximately 90% of the accuracy with 10% of the labor. Our experimental design reduced the complexity of the tracking problem by tethering the insect and allowing it to walk in place on a lightly oiled glass surface, but in principle, the algorithms implemented are extensible to free walking. Our software is free and open-source, written in the free language Python and including a graphical user interface for configuration and control. We encourage collaborative enhancements to make this tool both better and widely utilized.

  4. Computer Modelling of 3D Geological Surface

    CERN Document Server

    Kodge, B G

    2011-01-01

    The geological surveying presently uses methods and tools for the computer modeling of 3D-structures of the geographical subsurface and geotechnical characterization as well as the application of geoinformation systems for management and analysis of spatial data, and their cartographic presentation. The objectives of this paper are to present a 3D geological surface model of Latur district in Maharashtra state of India. This study is undertaken through the several processes which are discussed in this paper to generate and visualize the automated 3D geological surface model of a projected area.

  5. Computational Analysis of the Transonic Dynamics Tunnel Using FUN3D

    Science.gov (United States)

    Chwalowski, Pawel; Quon, Eliot; Brynildsen, Scott E.

    2016-01-01

    This paper presents results from an exploratory two-year effort of applying Computational Fluid Dynamics (CFD) to analyze the empty-tunnel flow in the NASA Langley Research Center Transonic Dynamics Tunnel (TDT). The TDT is a continuous-flow, closed circuit, 16- x 16-foot slotted-test-section wind tunnel, with capabilities to use air or heavy gas as a working fluid. In this study, experimental data acquired in the empty tunnel using the R-134a test medium was used to calibrate the computational data. The experimental calibration data includes wall pressures, boundary-layer profiles, and the tunnel centerline Mach number profiles. Subsonic and supersonic flow regimes were considered, focusing on Mach 0.5, 0.7 and Mach 1.1 in the TDT test section. This study discusses the computational domain, boundary conditions, and initial conditions selected and the resulting steady-state analyses using NASA's FUN3D CFD software.

  6. World's first ABWR start-up test analysis with 3-D transient computational code

    International Nuclear Information System (INIS)

    The Kashiwazaki-Kariwa Nuclear Power Station Unit 6, the world's first Advanced BWR (ABWR), began commercial operation from November 1996 following one year of start-up tests. A large number of variables which may be used to validate the advanced design features were obtained from transient tests. These test data are now being used for the qualification of TRACG, a BWR 3-D transient analysis code. Calculated results show that TRACG is fully capable of accurately predicting ABWR transient response and will be useful for application to future plant designs

  7. 3-D finite element computation and dynamic modal analysis on ultrasonic vibration systems

    Institute of Scientific and Technical Information of China (English)

    倪金刚; 张学仁; 聂景旭(Department of Jet Propulsion 405; Beijing University of Aeronautics and Astronautics; Beijing 100083; China)

    1996-01-01

    Stress and modal analyses are performed on an ultrasonic vibration system by means of a 3-dimensional finite element computation and dynamic modal analysis code "Algor" The system consists of an edge-cracked specimen linked elastically with one or two amplifying horns which come into resonant longitudinal vibration at 20kHz.Operating principle of the ultrasonic fatigue machines and experimental procedures for ultrasonic fatigue crack growth studies are briefly presented.

  8. Parametrizable cameras for 3D computational steering

    NARCIS (Netherlands)

    Mulder, J.D.; Wijk, J.J. van

    1997-01-01

    We present a method for the definition of multiple views in 3D interfaces for computational steering. The method uses the concept of a point-based parametrizable camera object. This concept enables a user to create and configure multiple views on his custom 3D interface in an intuitive graphical man

  9. [Computer-assisted 3D phonetography].

    Science.gov (United States)

    Neuschaefer-Rube, C; Klajman, S

    1996-10-01

    Profiles of fundamental frequency sound pressure levels and voice duration are measured separately in clinical practice. It was the aim of the present study to combine the two examinations, in order to estimate the relationship between pitch, sound pressure level and voice duration and to develop a new computer-assisted graph. A three-dimensional (3D) wireframe phonogram was constructed based on SPL profiles to obtain a general view of the parameters recorded. We have termed this "phonetography". Variable further projections were selected for the analysis of different aspects of parametric relationships. The results in 21 healthy volunteers and 4 patients with hyperfunctional dysphonias demonstrated that there were three typical figures of the 3D phonograms produced, depending on the relationship between voice duration when soft ("piano") compared to loud ("forte"). In one-third of the healthy volunteers, the values of the piano voice duration were greater than those of forte for almost all pitches examined. In two-thirds of the healthy subjects the values of forte voice duration were partly greater, as were those of piano voice duration. All of the patients showed voice duration values greater for forte than for piano. The results of the study demonstrate that the 3D phonogram is a useful tool for obtaining new insights into various relationships of voice parameters.

  10. Fatigue of multiscale composites with secondary nanoplatelet reinforcement: 3D computational analysis

    DEFF Research Database (Denmark)

    Dai, Gaoming; Mishnaevsky, Leon, Jr.

    2014-01-01

    3D numerical simulations of fatigue damage of multiscale fiber reinforced polymer composites with secondary nanoclay reinforcement are carried out. Macro–micro FE models of the multiscale composites are generated automatically using Python based software. The effect of the nanoclay reinforcement...... (localized in the fiber/matrix interface (fiber sizing) and distributed throughout the matrix) on the crack path, damage mechanisms and fatigue behavior is investigated in numerical experiments. It was observed that the composites with secondary nanoreinforcement localized in the fiber sizing ensure higher...

  11. Computing and monitoring potential of public spaces by shading analysis using 3d lidar data and advanced image analysis

    Science.gov (United States)

    Zwolinski, A.; Jarzemski, M.

    2015-04-01

    The paper regards specific context of public spaces in "shadow" of tall buildings located in European cities. Majority of tall buildings in European cities were built in last 15 years. Tall buildings appear mainly in city centres, directly at important public spaces being viable environment for inhabitants with variety of public functions (open spaces, green areas, recreation places, shops, services etc.). All these amenities and services are under direct impact of extensive shading coming from the tall buildings. The paper focuses on analyses and representation of impact of shading from tall buildings on various public spaces in cities using 3D city models. Computer environment of 3D city models in cityGML standard uses 3D LiDAR data as one of data types for definition of 3D cities. The structure of cityGML allows analytic applications using existing computer tools, as well as developing new techniques to estimate extent of shading coming from high-risers, affecting life in public spaces. These measurable shading parameters in specific time are crucial for proper functioning, viability and attractiveness of public spaces - finally it is extremely important for location of tall buildings at main public spaces in cities. The paper explores impact of shading from tall buildings in different spatial contexts on the background of using cityGML models based on core LIDAR data to support controlled urban development in sense of viable public spaces. The article is prepared within research project 2TaLL: Application of 3D Virtual City Models in Urban Analyses of Tall Buildings, realized as a part of Polish-Norway Grants.

  12. 3D face modeling, analysis and recognition

    CERN Document Server

    Daoudi, Mohamed; Veltkamp, Remco

    2013-01-01

    3D Face Modeling, Analysis and Recognition presents methodologies for analyzing shapes of facial surfaces, develops computational tools for analyzing 3D face data, and illustrates them using state-of-the-art applications. The methodologies chosen are based on efficient representations, metrics, comparisons, and classifications of features that are especially relevant in the context of 3D measurements of human faces. These frameworks have a long-term utility in face analysis, taking into account the anticipated improvements in data collection, data storage, processing speeds, and application s

  13. Petrophysical analysis of limestone rocks by nuclear logging and 3D high-resolution X-ray computed microtomography

    International Nuclear Information System (INIS)

    This study presents the pore-space system analysis of the 2-ITAB-1-RJ well cores, which were drilled in the Sao Jose do Itaborai Basin, in the state of Rio de Janeiro, Brasil. The analysis presented herein has been developed based on two techniques: nuclear logging and 3D high-resolution X-ray computed microtomography. Nuclear logging has been proven to be the technique that provides better quality and more quantitative information about the porosity using radioactive sources. The Density Gamma Probe and the Neutron Sonde used in this work provide qualitative information about bulk density variations and compensated porosity of the geological formation. The samples obtained from the well cores were analyzed by microtomography. The use of this technique in sedimentary rocks allows quantitative evaluation of pore system and generates high-resolution 3D images (∼microns order). The images and data obtained by microtomography were integrated with the response obtained by nuclear logging. The results obtained by these two techniques allow the understanding of the pore-size distribution and connectivity, as well as the porosity values. Both techniques are important and they complement each other.

  14. Infra Red 3D Computer Mouse

    DEFF Research Database (Denmark)

    Harbo, Anders La-Cour; Stoustrup, Jakob

    2000-01-01

    The infra red 3D mouse is a three dimensional input device to a computer. It works by determining the position of an arbitrary object (like a hand) by emitting infra red signals from a number of locations and measuring the reflected intensities. To maximize stability, robustness, and use...

  15. 3D Cameras: 3D Computer Vision of Wide Scope

    OpenAIRE

    May, Stefan; Pervoelz, Kai; Surmann, Hartmut

    2007-01-01

    First of all, a short comparison of range sensors and their underlying principles was given. The chapter further focused on 3D cameras. The latest innovations have given a significant improvement for the measurement accuracy, wherefore this technology has attracted attention in the robotics community. This was also the motivation for the examination in this chapter. On this account, several applications were presented, which represents common problems in the domain of autonomous robotics. For...

  16. 3-D computational model of poly (lactic acid)/halloysite nanocomposites: Predicting elastic properties and stress analysis

    DEFF Research Database (Denmark)

    De Silva, R. T.; Pasbakhsh, Pooria; Goh, K. L.;

    2014-01-01

    A real-structure based 3-D micromechanical computational model of poly (lactic acid) nanocomposites reinforced by randomly oriented halloysite nanotubes (HNTs) was developed and compared with an idealized model (conventional model) and experimental results. The developed idealized model consists ...... and aspect ratios. Numerical studies were validated with experimental investigations and the developed real-structure based model gave more accurate results than idealized and analytical models. (C) 2014 Elsevier Ltd. All rights reserved....

  17. SURVEY AND ANALYSIS OF 3D STEGANOGRAPHY

    Directory of Open Access Journals (Sweden)

    K .LAKSHMI

    2011-01-01

    Full Text Available Steganography is the science that involves communicating secret data in an appropriate multimedia carrier, eg., images, audio, and video files. The remarkable growth in computational power, increase in current security approaches and techniques are often used together to ensures security of the secret message. Steganography’s ultimate objectives, which are capacity and invisibility, are the main factors that separate it from related techniques. In this paper we focus on 3D models of steganography and conclude with some review analysis of high capacity data hiding and low-distortion 3D models.

  18. High-throughput analysis of horse sperms' 3D swimming patterns using computational on-chip imaging.

    Science.gov (United States)

    Su, Ting-Wei; Choi, Inkyum; Feng, Jiawen; Huang, Kalvin; Ozcan, Aydogan

    2016-06-01

    Using a high-throughput optical tracking technique that is based on partially-coherent digital in-line holography, here we report a detailed analysis of the statistical behavior of horse sperms' three-dimensional (3D) swimming dynamics. This dual-color and dual-angle lensfree imaging platform enables us to track individual 3D trajectories of ∼1000 horse sperms at sub-micron level within a sample volume of ∼9μL at a frame rate of 143 frames per second (FPS) and collect thousands of sperm trajectories within a few hours for statistical analysis of their 3D dynamics. Using this high-throughput imaging platform, we recorded >17,000 horse sperm trajectories that can be grouped into six major categories: irregular, linear, planar, helical, ribbon, and hyperactivated, where the hyperactivated swimming patterns can be further divided into four sub-categories, namely hyper-progressive, hyper-planar, hyper-ribbon, and star-spin. The large spatio-temporal statistics that we collected with this 3D tracking platform revealed that irregular, planar, and ribbon trajectories are the dominant 3D swimming patterns observed in horse sperms, which altogether account for >97% of the trajectories that we imaged in plasma-free semen extender medium. Through our experiments we also found out that horse seminal plasma in general increases sperms' straightness in their 3D trajectories, enhancing the relative percentage of linear swimming patterns and suppressing planar swimming patterns, while barely affecting the overall percentage of ribbon patterns. PMID:26826909

  19. CASTLE3D - A Computer Aided System for Labelling Archaeological Excavations in 3D

    Science.gov (United States)

    Houshiar, H.; Borrmann, D.; Elseberg, J.; Nüchter, A.; Näth, F.; Winkler, S.

    2015-08-01

    Documentation of archaeological excavation sites with conventional methods and tools such as hand drawings, measuring tape and archaeological notes is time consuming. This process is prone to human errors and the quality of the documentation depends on the qualification of the archaeologist on site. Use of modern technology and methods in 3D surveying and 3D robotics facilitate and improve this process. Computer-aided systems and databases improve the documentation quality and increase the speed of data acquisition. 3D laser scanning is the state of the art in modelling archaeological excavation sites, historical sites and even entire cities or landscapes. Modern laser scanners are capable of data acquisition of up to 1 million points per second. This provides a very detailed 3D point cloud of the environment. 3D point clouds and 3D models of an excavation site provide a better representation of the environment for the archaeologist and for documentation. The point cloud can be used both for further studies on the excavation and for the presentation of results. This paper introduces a Computer aided system for labelling archaeological excavations in 3D (CASTLE3D). Consisting of a set of tools for recording and georeferencing the 3D data from an excavation site, CASTLE3D is a novel documentation approach in industrial archaeology. It provides a 2D and 3D visualisation of the data and an easy-to-use interface that enables the archaeologist to select regions of interest and to interact with the data in both representations. The 2D visualisation and a 3D orthogonal view of the data provide cuts of the environment that resemble the traditional hand drawings. The 3D perspective view gives a realistic view of the environment. CASTLE3D is designed as an easy-to-use on-site semantic mapping tool for archaeologists. Each project contains a predefined set of semantic information that can be used to label findings in the data. Multiple regions of interest can be joined under

  20. 3D analysis methods - Study and seminar

    International Nuclear Information System (INIS)

    The first part of the report results from a study that was performed as a Nordic co-operation activity with active participation from Studsvik Scandpower and Westinghouse Atom in Sweden, and VTT in Finland. The purpose of the study was to identify and investigate the effects rising from using the 3D transient com-puter codes in BWR safety analysis, and their influence on the transient analysis methodology. One of the main questions involves the critical power ratio (CPR) calculation methodology. The present way, where the CPR calculation is per-formed with a separate hot channel calculation, can be artificially conservative. In the investigated cases, no dramatic minimum CPR effect coming from the 3D calculation is apparent. Some cases show some decrease in the transient change of minimum CPR with the 3D calculation, which confirms the general thinking that the 1D calculation is conservative. On the other hand, the observed effect on neutron flux behaviour is quite large. In a slower transient the 3D effect might be stronger. The second part of the report is a summary of a related seminar that was held on the 3D analysis methods. The seminar was sponsored by the Reactor Safety part (NKS-R) of the Nordic Nuclear Safety Research Programme (NKS). (au)

  1. Practical algorithms for 3D computer graphics

    CERN Document Server

    Ferguson, R Stuart

    2013-01-01

    ""A valuable book to accompany any course that mixes the theory and practice of 3D graphics. The book's web site has many useful programs and code samples.""-Karen Rafferty, Queen's University, Belfast""The topics covered by this book are backed by the OpenFX modeling and animation software. This is a big plus in that it provides a practical perspective and encourages experimentation. … [This] will offer students a more interesting and hands-on learning experience, especially for those wishing to pursue a career in computer game development.""-Naganand Madhavapeddy, GameDeveloper>

  2. Computational technology for analysis of 3D meso-structure effects on damage and failure of concrete

    OpenAIRE

    Wang, X.; Zhang, M.; Jivkov, A. P.

    2016-01-01

    Methodology for analysis of meso-structure effects on longer-scale mechanical response of concrete is developed. Efficient algorithms for particle generation and packing are proposed to represent 3D meso-structures as collections of discrete features distributed randomly in a continuous phase. Specialised to concrete, the continuous phase represents mortar, while the features are aggregates and voids. Intra- and inter-phase cohesive zones are used for failure initiation and crack propagation....

  3. Reconstruction and analysis of shapes from 3D scans

    NARCIS (Netherlands)

    ter Haar, F.B.

    2009-01-01

    In this thesis we use 3D laser range scans for the acquisition, reconstruction, and analysis of 3D shapes. 3D laser range scanning has proven to be a fast and effective way to capture the surface of an object in a computer. Thousands of depth measurements represent a part of the surface geometry as

  4. Computational Biomodelling and Analysis of 3D Structure of HUMAN Proto-oncogene c-Rel: A Tumorigenesis Activator Protein

    Directory of Open Access Journals (Sweden)

    Atala Bihari Jena

    2013-09-01

    Full Text Available With the advent of biomedical research in the field of human science several protein are found in human body acts s a health hazard. The proto-oncogene c-Rel protein is mostly found in human is encoded by the REL gene and belongs to the Rel/NF- kB transcription factor family, which regulates a large variety of cellular functions. Proto-oncogene involved and plays a great role in differentiation and lymphopoiesis. Proto-oncogene may be harmful and cause cancer when they are mutated. To understand the operational mechanism of HUMAN Proto-oncogene c-Rel protein, it is imperative to understand the structural model of that particular protein but the three dimensional (3D structure has not yet been reported in Protein Data Bank (PDB. In the present study a complete structural analysis and 3-D modelling of HUMAN Proto-oncogene c-Rel of Homosapiens.Based on the PDB Blast report three dimensional structure of the Proto-oncogenec-Rel protein, was predicted by using the SWISS MODEL. Predicted model was further assessed by SAVES (PROCHEK, VERIFY 3D, ERRAT and Ramachandran Server, which show with acceptable scores and the reliability of final refined model. The overall result provides the evidence of good quality of model and furnishes an adequate foundation for functional analysis of experimentally derived crystal structures and also helps in cancer research with furnishes a novel starting point for structure based drug design of proto-oncogene c-Rel protein.

  5. Simulation of dynamic behaviour of a digital displacement motor using transient 3d computational fluid dynamics analysis

    DEFF Research Database (Denmark)

    Rømer, Daniel; Johansen, Per; Pedersen, Henrik C.;

    2013-01-01

    A fast rotating 1500 rpm radial piston digital displacement motor connected to a 350 bar high pressure manifold is simulated by means of transient 3D CFD analysis of a single pressure chamber. The analysis includes dynamic piston and valve movement, influencing the boundaries of the fluid domain...... of the CFD analysis, the dynamic response of the pressure chamber and valve movement of a digital displacement motor is presented, along with the total efficiency of a multi-chamber motor at full and partial displacement. Simulation predicts that pressure over- and undershoot may be reduced to a few percent....... Movement of the low and high pressure valves is coupled to fluid forces and valve actuation is included to control the valve movement according to the pressure cycle of the digital displacement motor. The fluid domain is meshed using a structured/unstructured non-conformal mesh, which is updated throughout...

  6. Confirmatory analysis of the AP1000 passive residual heat removal heat exchanger with 3-D computational fluid dynamic analysis

    International Nuclear Information System (INIS)

    The AP1000 is an 1100 MWe advanced nuclear power plant that uses passive safety features to enhance plant safety and to provide significant and measurable improvements in plant simplification, reliability, investment protection and plant costs. The AP1000 received final design approval from the US-NRC in 2004. The AP1000 design is based on the AP600 design that received final design approval in 1999. Wherever possible, the AP1000 plant configuration and layout was kept the same as AP600 to take advantage of the maturity of the design and to minimize new design efforts. As a result, the two-loop configuration was maintained for AP1000, and the containment vessel diameter was kept the same. It was determined that this significant power up-rate was well within the capability of the passive safety features, and that the safety margins for AP1000 were greater than those of operating PWRs. A key feature of the passive core cooling system is the passive residual heat removal heat exchanger (PRHR HX) that provides decay heat removal for postulated LOCA and non-LOCA events. The PRHR HX is a C-tube heat exchanger located in the in-containment refueling water storage tank (IRWST) above the core promoting natural circulation heat removal between the reactor cooling system and the tank. Component testing was performed for the AP600 PRHR HX to determine the heat transfer characteristics and to develop correlations to be used for the AP1000 safety analysis codes. The data from these tests were confirmed by subsequent integral tests at three separate facilities including the ROSA facility in Japan. Owing to the importance of this component, an independent analysis has been performed using the ATHOS-based computational fluid dynamics computer code PRHRCFD. Two separate models of the PRHR HX and IRWST have been developed representing the ROSA test geometry and the AP1000 plant geometry. Confirmation of the ROSA test results were used to validate PRHRCFD, and the AP1000 plant model

  7. Technical and functional analysis of Albolafia waterwheel (Cordoba, Spain): 3D modeling, computational-fluid dynamics simulation and finite-element analysis

    International Nuclear Information System (INIS)

    Highlights: • Technical and functional analysis of the Albolafia waterwheel (Córdoba, Spain). • Spatial distribution of speeds using computational-fluid dynamics simulation (CFD). • Finite-element analysis (FEA) of the waterwheel. • Dynamic simulation of the waterwheel using Computer-Aided Engineering (CAE) techniques. • Validation of the operation of the waterwheel. - Abstract: A detailed study has been made of a vertical waterwheel, the wheel of Albolafia situated on the Guadalquivir river near the city of Cordoba (Spain). We propose a methodology for ad hoc research based on three aspects: 3D geometric modeling, analysis with computational fluid-dynamics techniques and dynamic simulation of the whole and its finite-element analysis. The results show the correct operation of the waterwheel with an initial moment of inertia of 90,800 N m and a range of water-flow speeds of between 0.91 and 1.01 m/s. These values are related to the average flow of the river, which allowed the wheel to operate at least 124 days per year. The spatial distribution of stresses has shown that the full buckets created an imbalance compared with the empty ones, and that the star-shaped polygon reinforcement effectively absorbed these tensions. In addition, the oak wood used in the construction of the waterwheel proved highly resistant, as the maximum working stress has never been surpassed, reflecting the effectiveness of the materials used at the time

  8. A study of different approaches for multi-scale sensitivity analysis of the TALL-3D experiment using thermal-hydraulic computer codes

    International Nuclear Information System (INIS)

    In the context of the FP7 European THINS Project, complex thermal-hydraulic phenomena relevant for the Generation IV of nuclear reactors are investigated. KTH (Sweden) built the TALL-3D facility to investigate the transition from forced to natural circulation of the Lead-Bismuth Eutectic (LBE) in a pool connected to a 3-leg primary circuit with two heaters and a heat exchanger. The simulation of such 3D phenomena is a challenging task. GRS (Germany) developed the coupling between the Computational Fluid Dynamics (CFD) code ANSYS CFX and the System Analysis code ATHLET. Such coupled codes combine the advantages of CFD, which allow a fine resolution of 3D phenomena, and of System Analysis codes, which are fast running. TUM (Germany) is responsible for the Uncertainty and Sensitivity Analysis of the coupled ATHLET-CFX model in the THINS Project. The influence of modeling uncertainty on simulation results needs to be assessed to characterize and to improve the model and, eventually, to assess its performance against experimental data. TUM has developed a computational framework capable of propagating model input uncertainty through coupled codes. This framework can also be used to apply different approaches for the assessment of the influence of the uncertain input parameters on the model output (Sensitivity Analysis). The work reported in this paper focuses on three methods for the assessment of the sensitivity of the results to the modeling uncertainty. The first method (Morris) allows for the computation of the Elementary Effects resulting from the input parameters. This method is widely used to perform Screening Analysis. The second method (Spearman's rank correlation) relies on regression-based non-parametric measures. This method is suitable if the relation between the input and the output variables is at least monotonic, with the advantage of a low computational cost. The last method (Sobol') computes so-called total effect indices which account for

  9. TRIO a general computer code for reactor 3-D flows analysis. Application to a LMFBR hot plenum

    International Nuclear Information System (INIS)

    TRIO is a code developed at CEA to investigate general incompressible 2D and 3D viscous flows. Two calculations are presented: the lid driven cubic cavity at Re=400; steady state (velocity and temperature field) of a LMFBR hot plenum, carried out in order to prepare the calculation of a cold shock consecutive to a reactor scram. 8 refs., 26 figs.

  10. Automated analysis of 3D echocardiography

    NARCIS (Netherlands)

    Stralen, Marijn van

    2009-01-01

    In this thesis we aim at automating the analysis of 3D echocardiography, mainly targeting the functional analysis of the left ventricle. Manual analysis of these data is cumbersome, time-consuming and is associated with inter-observer and inter-institutional variability. Methods for reconstruction o

  11. Hybrid 3-D rocket trajectory program. Part 1: Formulation and analysis. Part 2: Computer programming and user's instruction. [computerized simulation using three dimensional motion analysis

    Science.gov (United States)

    Huang, L. C. P.; Cook, R. A.

    1973-01-01

    Models utilizing various sub-sets of the six degrees of freedom are used in trajectory simulation. A 3-D model with only linear degrees of freedom is especially attractive, since the coefficients for the angular degrees of freedom are the most difficult to determine and the angular equations are the most time consuming for the computer to evaluate. A computer program is developed that uses three separate subsections to predict trajectories. A launch rail subsection is used until the rocket has left its launcher. The program then switches to a special 3-D section which computes motions in two linear and one angular degrees of freedom. When the rocket trims out, the program switches to the standard, three linear degrees of freedom model.

  12. Computer animation for articulated 3D characters

    NARCIS (Netherlands)

    Kiss, S.

    2002-01-01

    We present a review of the computer animation literature, mainly concentrating on articulated characters and at least some degree of interactivity or real time simulation. Advances in dierent techniques such as key-frame, motion capture (also known as mocap), dynamics, inverse kinematics (IK), contr

  13. Automotive Underhood Thermal Management Analysis Using 3-D Coupled Thermal-Hydrodynamic Computer Models: Thermal Radiation Modeling

    Energy Technology Data Exchange (ETDEWEB)

    Pannala, S; D' Azevedo, E; Zacharia, T

    2002-02-26

    The goal of the radiation modeling effort was to develop and implement a radiation algorithm that is fast and accurate for the underhood environment. As part of this CRADA, a net-radiation model was chosen to simulate radiative heat transfer in an underhood of a car. The assumptions (diffuse-gray and uniform radiative properties in each element) reduce the problem tremendously and all the view factors for radiation thermal calculations can be calculated once and for all at the beginning of the simulation. The cost for online integration of heat exchanges due to radiation is found to be less than 15% of the baseline CHAD code and thus very manageable. The off-line view factor calculation is constructed to be very modular and has been completely integrated to read CHAD grid files and the output from this code can be read into the latest version of CHAD. Further integration has to be performed to accomplish the same with STAR-CD. The main outcome of this effort is to obtain a highly scalable and portable simulation capability to model view factors for underhood environment (for e.g. a view factor calculation which took 14 hours on a single processor only took 14 minutes on 64 processors). The code has also been validated using a simple test case where analytical solutions are available. This simulation capability gives underhood designers in the automotive companies the ability to account for thermal radiation - which usually is critical in the underhood environment and also turns out to be one of the most computationally expensive components of underhood simulations. This report starts off with the original work plan as elucidated in the proposal in section B. This is followed by Technical work plan to accomplish the goals of the project in section C. In section D, background to the current work is provided with references to the previous efforts this project leverages on. The results are discussed in section 1E. This report ends with conclusions and future scope of

  14. 3D Surface Analysis and Classification in Neuroimaging Segmentation

    OpenAIRE

    Žagar, Martin; Mlinarić, Hrvoje; Knezović, Josip

    2011-01-01

    This work emphasizes new algorithms for 3D edge and corner detection used in surface extraction and new concept of image segmentation in neuroimaging based on multidimensional shape analysis and classification. We propose using of NifTI standard for describing input data which enables interoperability and enhancement of existing computing tools used widely in neuroimaging research. In methods section we present our newly developed algorithm for 3D edge and corner detection, togeth...

  15. COMPUTER MODELING IN DEFORM-3D FOR ANALYSIS OF PLASTIC FLOW IN HIGH-SPEED HOT EXTRUSION OF BIMETALLIC FORMATIVE PARTS OF DIE TOOLING

    Directory of Open Access Journals (Sweden)

    I. V. Kachanov

    2015-01-01

    Full Text Available The modern development of industrial production is closely connected with the use of science-based and high technologies to ensure competitiveness of the manufactured products on the world market. There is also much tension around an energy- and resource saving problem which can be solved while introducing new technological processes and  creation of new materials that provide productivity increase through automation and improvement of tool life. Development and implementation of such technologies are rather often considered as time-consuming processes  which are connected with complex calculations and experimental investigations. Implementation of a simulation modelling for materials processing using modern software products serves an alternative to experimental and theoretical methods of research.The aim of this paper is to compare experimental results while obtaining bimetallic samples of a forming tool through the method of speed hot extrusion and the results obtained with the help of computer simulation using DEFORM-3D package and a finite element method. Comparative analysis of plastic flow of real and model samples has shown that the obtained models provide high-quality and reliable picture of plastic flow during high-speed hot extrusion. Modeling in DEFORM-3D make it possible to eliminate complex calculations and significantly reduce a number of experimental studies while developing new technological processes.

  16. Computation of 3D form factors in complex environments

    International Nuclear Information System (INIS)

    The calculation of radiant interchange among opaque surfaces in a complex environment poses the general problem of determining the visible and hidden parts of the environment. In many thermal engineering applications, surfaces are separated by radiatively non-participating media and may be idealized as diffuse emitters and reflectors. Consenquently the net radiant energy fluxes are intimately related to purely geometrical quantities called form factors, that take into account hidden parts: the problem is reduced to the form factor evaluation. This paper presents the method developed for the computation of 3D form factors in the finite-element module of the system TRIO, which is a general computer code for thermal and fluid flow analysis. The method is derived from an algorithm devised for synthetic image generation. A comparison is performed with the standard contour integration method also implemented and suited to convex geometries. Several illustrative examples of finite-element thermal calculations in radiating enclosures are given

  17. 3D surface analysis and classification in neuroimaging segmentation.

    Science.gov (United States)

    Zagar, Martin; Mlinarić, Hrvoje; Knezović, Josip

    2011-06-01

    This work emphasizes new algorithms for 3D edge and corner detection used in surface extraction and new concept of image segmentation in neuroimaging based on multidimensional shape analysis and classification. We propose using of NifTI standard for describing input data which enables interoperability and enhancement of existing computing tools used widely in neuroimaging research. In methods section we present our newly developed algorithm for 3D edge and corner detection, together with the algorithm for estimating local 3D shape. Surface of estimated shape is analyzed and segmented according to kernel shapes. PMID:21755723

  18. 3D motion analysis via energy minimization

    Energy Technology Data Exchange (ETDEWEB)

    Wedel, Andreas

    2009-10-16

    This work deals with 3D motion analysis from stereo image sequences for driver assistance systems. It consists of two parts: the estimation of motion from the image data and the segmentation of moving objects in the input images. The content can be summarized with the technical term machine visual kinesthesia, the sensation or perception and cognition of motion. In the first three chapters, the importance of motion information is discussed for driver assistance systems, for machine vision in general, and for the estimation of ego motion. The next two chapters delineate on motion perception, analyzing the apparent movement of pixels in image sequences for both a monocular and binocular camera setup. Then, the obtained motion information is used to segment moving objects in the input video. Thus, one can clearly identify the thread from analyzing the input images to describing the input images by means of stationary and moving objects. Finally, I present possibilities for future applications based on the contents of this thesis. Previous work in each case is presented in the respective chapters. Although the overarching issue of motion estimation from image sequences is related to practice, there is nothing as practical as a good theory (Kurt Lewin). Several problems in computer vision are formulated as intricate energy minimization problems. In this thesis, motion analysis in image sequences is thoroughly investigated, showing that splitting an original complex problem into simplified sub-problems yields improved accuracy, increased robustness, and a clear and accessible approach to state-of-the-art motion estimation techniques. In Chapter 4, optical flow is considered. Optical flow is commonly estimated by minimizing the combined energy, consisting of a data term and a smoothness term. These two parts are decoupled, yielding a novel and iterative approach to optical flow. The derived Refinement Optical Flow framework is a clear and straight-forward approach to

  19. Design for scalability in 3D computer graphics architectures

    DEFF Research Database (Denmark)

    Holten-Lund, Hans Erik

    2002-01-01

    This thesis describes useful methods and techniques for designing scalable hybrid parallel rendering architectures for 3D computer graphics. Various techniques for utilizing parallelism in a pipelines system are analyzed. During the Ph.D study a prototype 3D graphics architecture named Hybris has...... been developed. Hybris is a prototype rendering architeture which can be tailored to many specific 3D graphics applications and implemented in various ways. Parallel software implementations for both single and multi-processor Windows 2000 system have been demonstrated. Working hardware...

  20. Plasma-material interactions: A Langmuir probe analysis of a cylindrical SiO(2) deposition system and a computational study using VFTRIM3D

    Science.gov (United States)

    Turkot, Robert Bruce, Jr.

    This dissertation is broken into two sections describing, first, a computer code simulating ion-surface interactions, VFTRIM3D, and, second, an experimental Langmuir probe analysis of a cylindrical SiOsb2 deposition system. VFTRIM3D is a 3-dimensional, Monte-Carlo, binary collision code employing fractal algorithms used to simulate atomic-scale surface roughness. This work applies this code to studies of incident ion energies in the 10's to 100's of eV on various targets and comparisons to experimental data prove its dependability for such simulations. The experimental portion of this thesis includes the development and investigation of a cylindrical SiOsb2 deposition system used to deposit gas permeation barrier thin films onto PET bottles. The plasma analysis is done utilizing time- and spatially resolved Langmuir probe techniques. In order to study the characteristics of the dielectric deposition plasma, a "hot" Langmuir probe was developed to acquire typical Langmuir probe data during SiOsb2 deposition. The SiOsb2 films deposited in this system are analyzed for their gas permeation qualities and are correlated to the plasma properties gathered using Langmuir probes as well as the gas, pressure, and time recipes used to produce them. It is found in this work that the application of SiOsb2 films onto flexible PET bottles using the fashion explained herein results in a decrease in the gas permeation characteristics of the SiOsb2-PET membrane as desired, but is found to be independent of the thickness of the SiOsb2 present. This limit is found to be caused by cracks and pinhole defects across the SiOsb2 film that permit uninhibited gas flow directly to the PET bottle.

  1. Use of short roll C-arm computed tomography and fully automated 3D analysis tools to guide transcatheter aortic valve replacement.

    Science.gov (United States)

    Kim, Michael S; Bracken, John; Eshuis, Peter; Chen, S Y James; Fullerton, David; Cleveland, Joseph; Messenger, John C; Carroll, John D

    2016-07-01

    Determination of the coplanar view is a critical component of transcatheter aortic valve replacement (TAVR). The safety and accuracy of a novel reduced angular range C-arm computed tomography (CACT) approach coupled with a fully automated 3D analysis tool package to predict the coplanar view in TAVR was evaluated. Fifty-seven patients with severe symptomatic aortic stenosis deemed prohibitive-risk for surgery and who underwent TAVR were enrolled. Patients were randomized 2:1 to CACT vs. angiography (control) in estimating the coplanar view. These approaches to determine the coplanar view were compared quantitatively. Radiation doses needed to determine the coplanar view were recorded for both the CACT and control patients. Use of CACT offered good agreement with the actual angiographic view utilized during TAVR in 34 out of 41 cases in which a CACT scan was performed (83 %). For these 34 cases, the mean angular magnitude difference, taking into account both oblique and cranial/caudal angulation, was 1.3° ± 0.4°, while the maximum difference was 7.3°. There were no significant differences in the mean total radiation dose delivered to patients between the CACT and control groups as measured by either dose area product (207.8 ± 15.2 Gy cm(2) vs. 186.1 ± 25.3 Gy cm(2), P = 0.47) or air kerma (1287.6 ± 117.7 mGy vs. 1098.9 ± 143.8 mGy, P = 0.32). Use of reduced-angular range CACT coupled with fully automated 3D analysis tools is a safe, practical, and feasible method by which to determine the optimal angiographic deployment view for guiding TAVR procedures. PMID:27091735

  2. Axial stent strut angle influences wall shear stress after stent implantation: analysis using 3D computational fluid dynamics models of stent foreshortening

    Directory of Open Access Journals (Sweden)

    Warltier David C

    2005-10-01

    Full Text Available Abstract Introduction The success of vascular stents in the restoration of blood flow is limited by restenosis. Recent data generated from computational fluid dynamics (CFD models suggest that the vascular geometry created by an implanted stent causes local alterations in wall shear stress (WSS that are associated with neointimal hyperplasia (NH. Foreshortening is a potential limitation of stent design that may affect stent performance and the rate of restenosis. The angle created between axially aligned stent struts and the principal direction of blood flow varies with the degree to which the stent foreshortens after implantation. Methods In the current investigation, we tested the hypothesis that stent foreshortening adversely influences the distribution of WSS and WSS gradients using time-dependent 3D CFD simulations of normal arteries based on canine coronary artery measurements of diameter and blood flow. WSS and WSS gradients were calculated using conventional techniques in ideal (16 mm and progressively foreshortened (14 and 12 mm stented computational vessels. Results Stent foreshortening increased the intrastrut area of the luminal surface exposed to low WSS and elevated spatial WSS gradients. Progressive degrees of stent foreshortening were also associated with strut misalignment relative to the direction of blood flow as indicated by analysis of near-wall velocity vectors. Conclusion The current results suggest that foreshortening may predispose the stented vessel to a higher risk of neointimal hyperplasia.

  3. Practical rendering and computation with Direct3D 11

    CERN Document Server

    Zink, Jason; Hoxley, Jack

    2011-01-01

    Practical Rendering and Computation with Direct3D 11 packs in documentation and in-depth coverage of basic and high-level concepts related to using Direct 3D 11 and is a top pick for any serious programming collection. … perfect for a wide range of users. Any interested in computation and multicore models will find this packed with examples and technical applications.-Midwest Book Review, October 2011The authors have generously provided us with an optimal blend of concepts and philosophy, illustrative figures to clarify the more difficult points, and source code fragments to make the ideas con

  4. A spherical harmonics intensity model for 3D segmentation and 3D shape analysis of heterochromatin foci.

    Science.gov (United States)

    Eck, Simon; Wörz, Stefan; Müller-Ott, Katharina; Hahn, Matthias; Biesdorf, Andreas; Schotta, Gunnar; Rippe, Karsten; Rohr, Karl

    2016-08-01

    The genome is partitioned into regions of euchromatin and heterochromatin. The organization of heterochromatin is important for the regulation of cellular processes such as chromosome segregation and gene silencing, and their misregulation is linked to cancer and other diseases. We present a model-based approach for automatic 3D segmentation and 3D shape analysis of heterochromatin foci from 3D confocal light microscopy images. Our approach employs a novel 3D intensity model based on spherical harmonics, which analytically describes the shape and intensities of the foci. The model parameters are determined by fitting the model to the image intensities using least-squares minimization. To characterize the 3D shape of the foci, we exploit the computed spherical harmonics coefficients and determine a shape descriptor. We applied our approach to 3D synthetic image data as well as real 3D static and real 3D time-lapse microscopy images, and compared the performance with that of previous approaches. It turned out that our approach yields accurate 3D segmentation results and performs better than previous approaches. We also show that our approach can be used for quantifying 3D shape differences of heterochromatin foci. PMID:27037463

  5. 3D Printing device adaptable to Computer Numerical Control (CNC)

    OpenAIRE

    Gardan, Julien; DANESI, Frédéric; Roucoules, Lionel; Schneider, A

    2014-01-01

    This article presents the development of a 3D printing device for the additive manufacturing adapted to a CNC machining. The application involves the integration of a specific printing head. Additive manufacturing technology is most commonly used for modeling, prototyping, tooling through an exclusive machine or 3D printer. A global review and analysis of technologies show the additive manufacturing presents little independent solutions [6][9]. The problem studied especially the additive manu...

  6. Education System Using Interactive 3D Computer Graphics (3D-CG) Animation and Scenario Language for Teaching Materials

    Science.gov (United States)

    Matsuda, Hiroshi; Shindo, Yoshiaki

    2006-01-01

    The 3D computer graphics (3D-CG) animation using a virtual actor's speaking is very effective as an educational medium. But it takes a long time to produce a 3D-CG animation. To reduce the cost of producing 3D-CG educational contents and improve the capability of the education system, we have developed a new education system using Virtual Actor.…

  7. 3D analysis of craniofacial growth and tooth eruption

    DEFF Research Database (Denmark)

    Kreiborg, Sven

    The 9th International Congress on Cleft Palate and Related Craniofacial Anomalies, 3D analysis, craniofacial growth, tooth eruption......The 9th International Congress on Cleft Palate and Related Craniofacial Anomalies, 3D analysis, craniofacial growth, tooth eruption...

  8. Skeleton-Sectional Structural Analysis for 3D Printing

    Institute of Scientific and Technical Information of China (English)

    Wen-Peng Xu; Wei Li; Li-Gang Liu

    2016-01-01

    3D printing has become popular and has been widely used in various applications in recent years. More and more home users have motivation to design their own models and then fabricate them using 3D printers. However, the printed objects may have some structural or stress defects as the users may be lack of knowledge on stress analysis on 3D models. In this paper, we present an approach to help users analyze a model’s structural strength while designing its shape. We adopt sectional structural analysis instead of conventional FEM (Finite Element Method) analysis which is computationally expensive. Based on sectional structural analysis, our approach imports skeletons to assist in integrating mesh designing, strength computing and mesh correction well. Skeletons can also guide sections building and load calculation for analysis. For weak regions with high stress over a threshold value in the model from analysis result, our system corrects them by scaling the corresponding bones of skeleton so as to make these regions stiff enough. A number of experiments have demonstrated the applicability and practicability of our approach.

  9. Dynamic 3D computed tomography scanner for vascular imaging

    Science.gov (United States)

    Lee, Mark K.; Holdsworth, David W.; Fenster, Aaron

    2000-04-01

    A 3D dynamic computed-tomography (CT) scanner was developed for imaging objects undergoing periodic motion. The scanner system has high spatial and sufficient temporal resolution to produce quantitative tomographic/volume images of objects such as excised arterial samples perfused under physiological pressure conditions and enables the measurements of the local dynamic elastic modulus (Edyn) of the arteries in the axial and longitudinal directions. The system was comprised of a high resolution modified x-ray image intensifier (XRII) based computed tomographic system and a computer-controlled cardiac flow simulator. A standard NTSC CCD camera with a macro lens was coupled to the electro-optically zoomed XRII to acquire dynamic volumetric images. Through prospective cardiac gating and computer synchronized control, a time-resolved sequence of 20 mm thick high resolution volume images of porcine aortic specimens during one simulated cardiac cycle were obtained. Performance evaluation of the scanners illustrated that tomographic images can be obtained with resolution as high as 3.2 mm-1 with only a 9% decrease in the resolution for objects moving at velocities of 1 cm/s in 2D mode and static spatial resolution of 3.55 mm-1 with only a 14% decrease in the resolution in 3D mode for objects moving at a velocity of 10 cm/s. Application of the system for imaging of intact excised arterial specimens under simulated physiological flow/pressure conditions enabled measurements of the Edyn of the arteries with a precision of +/- kPa for the 3D scanner. Evaluation of the Edyn in the axial and longitudinal direction produced values of 428 +/- 35 kPa and 728 +/- 71 kPa, demonstrating the isotropic and homogeneous viscoelastic nature of the vascular specimens. These values obtained from the Dynamic CT systems were not statistically different (p less than 0.05) from the values obtained by standard uniaxial tensile testing and volumetric measurements.

  10. 3D face analysis for demographic biometrics

    Energy Technology Data Exchange (ETDEWEB)

    Tokola, Ryan A [ORNL; Mikkilineni, Aravind K [ORNL; Boehnen, Chris Bensing [ORNL

    2015-01-01

    Despite being increasingly easy to acquire, 3D data is rarely used for face-based biometrics applications beyond identification. Recent work in image-based demographic biometrics has enjoyed much success, but these approaches suffer from the well-known limitations of 2D representations, particularly variations in illumination, texture, and pose, as well as a fundamental inability to describe 3D shape. This paper shows that simple 3D shape features in a face-based coordinate system are capable of representing many biometric attributes without problem-specific models or specialized domain knowledge. The same feature vector achieves impressive results for problems as diverse as age estimation, gender classification, and race classification.

  11. Multifractal modelling and 3D lacunarity analysis

    Energy Technology Data Exchange (ETDEWEB)

    Hanen, Akkari, E-mail: bettaieb.hanen@topnet.t [Laboratoire de biophysique, TIM, Faculte de Medecine (Tunisia); Imen, Bhouri, E-mail: bhouri_imen@yahoo.f [Unite de recherche ondelettes et multifractals, Faculte des sciences (Tunisia); Asma, Ben Abdallah, E-mail: asma.babdallah@cristal.rnu.t [Laboratoire de biophysique, TIM, Faculte de Medecine (Tunisia); Patrick, Dubois, E-mail: pdubois@chru-lille.f [INSERM, U 703, Lille (France); Hedi, Bedoui Mohamed, E-mail: medhedi.bedoui@fmm.rnu.t [Laboratoire de biophysique, TIM, Faculte de Medecine (Tunisia)

    2009-09-28

    This study presents a comparative evaluation of lacunarity of 3D grey level models with different types of inhomogeneity. A new method based on the 'Relative Differential Box Counting' was developed to estimate the lacunarity features of grey level volumes. To validate our method, we generated a set of 3D grey level multifractal models with random, anisotropic and hierarchical properties. Our method gives a lacunarity measurement correlated with the theoretical one and allows a better model classification compared with a classical approach.

  12. Computing Radiative Transfer in a 3D Medium

    Science.gov (United States)

    Von Allmen, Paul; Lee, Seungwon

    2012-01-01

    A package of software computes the time-dependent propagation of a narrow laser beam in an arbitrary three- dimensional (3D) medium with absorption and scattering, using the transient-discrete-ordinates method and a direct integration method. Unlike prior software that utilizes a Monte Carlo method, this software enables simulation at very small signal-to-noise ratios. The ability to simulate propagation of a narrow laser beam in a 3D medium is an improvement over other discrete-ordinate software. Unlike other direct-integration software, this software is not limited to simulation of propagation of thermal radiation with broad angular spread in three dimensions or of a laser pulse with narrow angular spread in two dimensions. Uses for this software include (1) computing scattering of a pulsed laser beam on a material having given elastic scattering and absorption profiles, and (2) evaluating concepts for laser-based instruments for sensing oceanic turbulence and related measurements of oceanic mixed-layer depths. With suitable augmentation, this software could be used to compute radiative transfer in ultrasound imaging in biological tissues, radiative transfer in the upper Earth crust for oil exploration, and propagation of laser pulses in telecommunication applications.

  13. 3D artefact for concurrent scale calibration in Computed Tomography

    DEFF Research Database (Denmark)

    Stolfi, Alessandro; De Chiffre, Leonardo

    2016-01-01

    A novel artefact for calibration of the scale in 3D X-ray Computed Tomography (CT) is presented. The artefact comprises a carbon fibre tubular structure on which a number of reference ruby spheres are glued. The artefact is positioned and scanned together with the workpiece inside the CT scanner...... providing a reference system for measurement. The artefact allows a considerable reduction of time by compressing the full process of calibration, scanning, measurement, and re-calibration, into a single process. The method allows a considerable reduction of the amount of data generated from CT scanning...

  14. Effect of coordinate rotation on 3D molecular descriptors computed by DragonX

    CERN Document Server

    Hechinger, Manuel

    2012-01-01

    Quantitative structure-property relations (QSPR) employing descriptors derived from the 3D molecular structure are frequently applied for property prediction in various fields of research. In particular, DragonX is one of the most widely used software packages for descriptor calculation. The reliability of 3D molecular descriptors computed by DragonX has lately been investigated, thereby focusing on the effect of computational methods used for molecular structure optimization on the accuracy of the resulting molecular descriptors. The present contribution extends the analysis to a more intrinsic problem of DragonX descriptor evaluation resulting from the sensitivity of the computed 3D descriptors on the coordinate system used for molecule description. Evaluating several 3D descriptors for converged molecular structures rotated around all 3 spatial axes (affine coordinate transformations) yields systematically varying descriptor values. Since this unphysical behavior severely affects the descriptor reliability...

  15. A 3D image analysis tool for SPECT imaging

    Science.gov (United States)

    Kontos, Despina; Wang, Qiang; Megalooikonomou, Vasileios; Maurer, Alan H.; Knight, Linda C.; Kantor, Steve; Fisher, Robert S.; Simonian, Hrair P.; Parkman, Henry P.

    2005-04-01

    We have developed semi-automated and fully-automated tools for the analysis of 3D single-photon emission computed tomography (SPECT) images. The focus is on the efficient boundary delineation of complex 3D structures that enables accurate measurement of their structural and physiologic properties. We employ intensity based thresholding algorithms for interactive and semi-automated analysis. We also explore fuzzy-connectedness concepts for fully automating the segmentation process. We apply the proposed tools to SPECT image data capturing variation of gastric accommodation and emptying. These image analysis tools were developed within the framework of a noninvasive scintigraphic test to measure simultaneously both gastric emptying and gastric volume after ingestion of a solid or a liquid meal. The clinical focus of the particular analysis was to probe associations between gastric accommodation/emptying and functional dyspepsia. Employing the proposed tools, we outline effectively the complex three dimensional gastric boundaries shown in the 3D SPECT images. We also perform accurate volume calculations in order to quantitatively assess the gastric mass variation. This analysis was performed both with the semi-automated and fully-automated tools. The results were validated against manual segmentation performed by a human expert. We believe that the development of an automated segmentation tool for SPECT imaging of the gastric volume variability will allow for other new applications of SPECT imaging where there is a need to evaluate complex organ function or tumor masses.

  16. 3D ultrasound computer tomography: update from a clinical study

    Science.gov (United States)

    Hopp, T.; Zapf, M.; Kretzek, E.; Henrich, J.; Tukalo, A.; Gemmeke, H.; Kaiser, C.; Knaudt, J.; Ruiter, N. V.

    2016-04-01

    Ultrasound Computer Tomography (USCT) is a promising new imaging method for breast cancer diagnosis. We developed a 3D USCT system and tested it in a pilot study with encouraging results: 3D USCT was able to depict two carcinomas, which were present in contrast enhanced MRI volumes serving as ground truth. To overcome severe differences in the breast shape, an image registration was applied. We analyzed the correlation between average sound speed in the breast and the breast density estimated from segmented MRIs and found a positive correlation with R=0.70. Based on the results of the pilot study we now carry out a successive clinical study with 200 patients. For this we integrated our reconstruction methods and image post-processing into a comprehensive workflow. It includes a dedicated DICOM viewer for interactive assessment of fused USCT images. A new preview mode now allows intuitive and faster patient positioning. We updated the USCT system to decrease the data acquisition time by approximately factor two and to increase the penetration depth of the breast into the USCT aperture by 1 cm. Furthermore the compute-intensive reflectivity reconstruction was considerably accelerated, now allowing a sub-millimeter volume reconstruction in approximately 16 minutes. The updates made it possible to successfully image first patients in our ongoing clinical study.

  17. Ground truth evaluation of computer vision based 3D reconstruction of synthesized and real plant images

    DEFF Research Database (Denmark)

    Nielsen, Michael; Andersen, Hans Jørgen; Slaughter, David;

    2007-01-01

    There is an increasing interest in using 3D computer vision in precision agriculture. This calls for better quantitative evaluation and understanding of computer vision methods. This paper proposes a test framework using ray traced crop scenes that allows in-depth analysis of algorithm performanc...

  18. Computational Modelling of Piston Ring Dynamics in 3D

    Directory of Open Access Journals (Sweden)

    Dlugoš Jozef

    2014-12-01

    Full Text Available Advanced computational models of a piston assembly based on the level of virtual prototypes require a detailed description of piston ring behaviour. Considering these requirements, the piston rings operate in regimes that cannot, in general, be simplified into an axisymmetric model. The piston and the cylinder liner do not have a perfect round shape, mainly due to machining tolerances and external thermo-mechanical loads. If the ring cannot follow the liner deformations, a local loss of contact occurs resulting in blow-by and increased consumption of lubricant oil in the engine. Current computational models are unable to implement such effects. The paper focuses on the development of a flexible 3D piston ring model based on the Timoshenko beam theory using the multibody system (MBS. The MBS model is compared to the finite element method (FEM solution.

  19. An Approach to Computer Modeling of Geological Faults in 3D and an Application

    Institute of Scientific and Technical Information of China (English)

    ZHU Liang-feng; HE Zheng; PAN Xin; WU Xin-cai

    2006-01-01

    3D geological modeling, one of the most important applications in geosciences of 3D GIS, forms the basis and is a prerequisite for visualized representation and analysis of 3D geological data. Computer modeling of geological faults in 3D is currently a topical research area. Structural modeling techniques of complex geological entities containing reverse faults are discussed and a series of approaches are proposed. The geological concepts involved in computer modeling and visualization of geological fault in 3D are explained, the type of data of geological faults based on geological exploration is analyzed, and a normative database format for geological faults is designed. Two kinds of modeling approaches for faults are compared: a modeling technique of faults based on stratum recovery and a modeling technique of faults based on interpolation in subareas. A novel approach, called the Unified Modeling Technique for stratum and fault, is presented to solve the puzzling problems of reverse faults, syn-sedimentary faults and faults terminated within geological models. A case study of a fault model of bed rock in the Beijing Olympic Green District is presented in order to show the practical result of this method. The principle and the process of computer modeling of geological faults in 3D are discussed and a series of applied technical proposals established. It strengthens our profound comprehension of geological phenomena and the modeling approach, and establishes the basic techniques of 3D geological modeling for practical applications in the field of geosciences.

  20. Preprint Big City 3D Visual Analysis

    OpenAIRE

    Lv, Zhihan; Li, Xiaoming; Zhang, Baoyun; Wang, Weixi; Feng, Shengzhong; Hu, Jinxing

    2015-01-01

    This is the preprint version of our paper on EUROGRAPHICS 2015. A big city visual analysis platform based on Web Virtual Reality Geographical Information System (WEBVRGIS) is presented. Extensive model editing functions and spatial analysis functions are available, including terrain analysis, spatial analysis, sunlight analysis, traffic analysis, population analysis and community analysis.

  1. Glasses for 3D ultrasound computer tomography: phase compensation

    Science.gov (United States)

    Zapf, M.; Hopp, T.; Ruiter, N. V.

    2016-03-01

    Ultrasound Computer Tomography (USCT), developed at KIT, is a promising new imaging system for breast cancer diagnosis, and was successfully tested in a pilot study. The 3D USCT II prototype consists of several hundreds of ultrasound (US) transducers on a semi-ellipsoidal aperture. Spherical waves are sequentially emitted by individual transducers and received in parallel by many transducers. Reflectivity volumes are reconstructed by synthetic aperture focusing (SAFT). However, straight forward SAFT imaging leads to blurred images due to system imperfections. We present an extension of a previously proposed approach to enhance the images. This approach includes additional a priori information and system characteristics. Now spatial phase compensation was included. The approach was evaluated with a simulation and clinical data sets. An increase in the image quality was observed and quantitatively measured by SNR and other metrics.

  2. Error Analysis Of 3d Polygonal Model:A Survey

    Directory of Open Access Journals (Sweden)

    Devendra Singh Rajput

    2012-05-01

    Full Text Available Various applications of computer graphics, (like animation, scientific visualization, and virtual reality involve the manipulation of geometric models. They are generally represented by triangular meshes due to its wide acceptance to process on rendering systems. The need of realism and high visual fidelity and the latest advances on scanning devices has increased complexity and size of triangular meshes. The original 3D model gets modified because of activities like approximation, transmission, processing and storage etc. Mostly the modification occurs due to simplification approaches which primarily use geometric distance metric as their simplification criteria. But it is hard to measure a small distance error accurately whereas other geometric or appearance error (like high curvature, thin region, color, texture, normals and volumetric has greater importance. Hence it is essential to understand the applicability of various parameters to evaluate the quality of 3D model. This paper briefly surveys the various errors analysis techniques, error metrics and tools to assess the quality of 3D mesh models.

  3. Protein 3D structure computed from evolutionary sequence variation.

    Directory of Open Access Journals (Sweden)

    Debora S Marks

    Full Text Available The evolutionary trajectory of a protein through sequence space is constrained by its function. Collections of sequence homologs record the outcomes of millions of evolutionary experiments in which the protein evolves according to these constraints. Deciphering the evolutionary record held in these sequences and exploiting it for predictive and engineering purposes presents a formidable challenge. The potential benefit of solving this challenge is amplified by the advent of inexpensive high-throughput genomic sequencing.In this paper we ask whether we can infer evolutionary constraints from a set of sequence homologs of a protein. The challenge is to distinguish true co-evolution couplings from the noisy set of observed correlations. We address this challenge using a maximum entropy model of the protein sequence, constrained by the statistics of the multiple sequence alignment, to infer residue pair couplings. Surprisingly, we find that the strength of these inferred couplings is an excellent predictor of residue-residue proximity in folded structures. Indeed, the top-scoring residue couplings are sufficiently accurate and well-distributed to define the 3D protein fold with remarkable accuracy.We quantify this observation by computing, from sequence alone, all-atom 3D structures of fifteen test proteins from different fold classes, ranging in size from 50 to 260 residues, including a G-protein coupled receptor. These blinded inferences are de novo, i.e., they do not use homology modeling or sequence-similar fragments from known structures. The co-evolution signals provide sufficient information to determine accurate 3D protein structure to 2.7-4.8 Å C(α-RMSD error relative to the observed structure, over at least two-thirds of the protein (method called EVfold, details at http://EVfold.org. This discovery provides insight into essential interactions constraining protein evolution and will facilitate a comprehensive survey of the universe of

  4. Computational analysis for antimicrobial active pyrano[2,3-d]pyrimidine derivatives on the basis of theoretical and experimental ground

    Directory of Open Access Journals (Sweden)

    Ajmal R. Bhat

    2016-06-01

    Full Text Available Annulated pyrano[2,3-d]pyrimidine derivatives were synthesized with methoxy, hydroxyl, nitrile and bromine substituents in its skeleton and correlated by electronic effect of substituents on the magnitude of antimicrobial activity. The different electron donating and electron withdrawing substituents of the pyrano[2,3-d]pyrimidine derivatives exerted positive influence on its antimicrobial activity against some Gram positive and Gram negative bacteria such as, Bacillus cereus, Staphylococcus aureus, Klebsiella pneumonia, Pseudomonas aureus and Escherichia coli, respectively. Antibacterial screening revealed that the presence of heteroaryl, cyano and amino groups on pyrano[2,3-d]pyrimidine skeleton increases its penetrating power on bacterial cell wall and becomes more biologically active. All the pyrano[2,3-d]pyrimidine derivatives were characterized by IR, 1H NMR, 13C NMR and mass spectra.

  5. Computational and methodological developments towards 3D full waveform inversion

    Science.gov (United States)

    Etienne, V.; Virieux, J.; Hu, G.; Jia, Y.; Operto, S.

    2010-12-01

    Full waveform inversion (FWI) is one of the most promising techniques for seismic imaging. It relies on a formalism taking into account every piece of information contained in the seismic data as opposed to more classical techniques such as travel time tomography. As a result, FWI is a high resolution imaging process able to reach a spatial accuracy equal to half a wavelength. FWI is based on a local optimization scheme and therefore the main limitation concerns the starting model which has to be closed enough to the real one in order to converge to the global minimum. Another counterpart of FWI is the required computational resources when considering models and frequencies of interest. The task becomes even more tremendous when one tends to perform the inversion using the elastic equation instead of using the acoustic approximation. This is the reason why until recently most studies were limited to 2D cases. In the last few years, due to the increase of the available computational power, FWI has focused a lot of interests and continuous efforts towards inversion of 3D models, leading to remarkable applications up to the continental scale. We investigate the computational burden induced by FWI in 3D elastic media and propose some strategic features leading to the reduction of the numerical cost while providing a great flexibility in the inversion parametrization. First, in order to release the memory requirements, we developed our FWI algorithm in the frequency domain and take benefit of the wave-number redundancy in the seismic data to process a quite reduced number of frequencies. To do so, we extract frequency solutions from time marching techniques which are efficient for 3D structures. Moreover, this frequency approach permits a multi-resolution strategy by proceeding from low to high frequencies: the final model at one frequency is used as the starting model for the next frequency. This procedure overcomes partially the non-linear behavior of the inversion

  6. Interactive 3D computer model of the human corneolimbal region

    DEFF Research Database (Denmark)

    Molvaer, Rikke Kongshaug; Andreasen, Arne; Heegaard, Steffen;

    2013-01-01

    in the superior limbal region and one LEC, six LCs and 12 FSPs in the inferior limbal region. Only few LECs, LCs and FSPs were localized nasally and temporally. CONCLUSION: Interactive 3D models are a powerful tool that may help to shed more light on the existence and spatial localization of the different stem...... at low and high magnification, aligned, 3D reconstructed and visualized using interactive 3D visualization software. The visualization software has interactive tools that make free rotations in all directions possible and makes it possible to create virtual sections independent of the original cutting...... plan. In all, one low-magnification and 24 high-magnification interactive 3D models were created. Immunohistochemistry against stem cell markers p63 and ΔNp63α was performed as a supplement to the 3D models. RESULTS: Using the interactive 3D models, we identified three types of stem cell niches...

  7. 3D Vectorial Time Domain Computational Integrated Photonics

    Energy Technology Data Exchange (ETDEWEB)

    Kallman, J S; Bond, T C; Koning, J M; Stowell, M L

    2007-02-16

    The design of integrated photonic structures poses considerable challenges. 3D-Time-Domain design tools are fundamental in enabling technologies such as all-optical logic, photonic bandgap sensors, THz imaging, and fast radiation diagnostics. Such technologies are essential to LLNL and WFO sponsors for a broad range of applications: encryption for communications and surveillance sensors (NSA, NAI and IDIV/PAT); high density optical interconnects for high-performance computing (ASCI); high-bandwidth instrumentation for NIF diagnostics; micro-sensor development for weapon miniaturization within the Stockpile Stewardship and DNT programs; and applications within HSO for CBNP detection devices. While there exist a number of photonics simulation tools on the market, they primarily model devices of interest to the communications industry. We saw the need to extend our previous software to match the Laboratory's unique emerging needs. These include modeling novel material effects (such as those of radiation induced carrier concentrations on refractive index) and device configurations (RadTracker bulk optics with radiation induced details, Optical Logic edge emitting lasers with lateral optical inputs). In addition we foresaw significant advantages to expanding our own internal simulation codes: parallel supercomputing could be incorporated from the start, and the simulation source code would be accessible for modification and extension. This work addressed Engineering's Simulation Technology Focus Area, specifically photonics. Problems addressed from the Engineering roadmap of the time included modeling the Auston switch (an important THz source/receiver), modeling Vertical Cavity Surface Emitting Lasers (VCSELs, which had been envisioned as part of fast radiation sensors), and multi-scale modeling of optical systems (for a variety of applications). We proposed to develop novel techniques to numerically solve the 3D multi-scale propagation problem for both the

  8. 3-D Multiphase Segmentation of X-Ray Micro Computed Tomography Data of Geologic Materials

    Science.gov (United States)

    Tuller, M.; Kulkarni, R.; Fink, W.

    2011-12-01

    Advancements of noninvasive imaging methods such as X-Ray Computed Tomography (CT) led to a recent surge of applications in Geoscience. While substantial efforts and resources have been devoted to advance CT technology and micro-scale analysis, the development of a stable 3-D multiphase image segmentation method applicable to large datasets is lacking. To eliminate the need for wet/dry or dual energy scans, image alignment, and subtraction analysis, commonly applied in synchrotron X-Ray micro CT, a segmentation method based on a Bayesian Markov Random Field (MRF) framework amenable to true 3-D multiphase processing was developed and evaluated. Furthermore, several heuristic and deterministic combinatorial optimization schemes required to solve the labeling problem of the MRF image model were implemented and tested for computational efficiency and their impact on segmentation results. Test results for natural and artificial porous media datasets demonstrate great potential of the MRF image model for 3-D multiphase segmentation.

  9. Analysis and dynamic 3D visualization of cerebral blood flow combining 3D and 4D MR image sequences

    Science.gov (United States)

    Forkert, Nils Daniel; Säring, Dennis; Fiehler, Jens; Illies, Till; Möller, Dietmar; Handels, Heinz

    2009-02-01

    In this paper we present a method for the dynamic visualization of cerebral blood flow. Spatio-temporal 4D magnetic resonance angiography (MRA) image datasets and 3D MRA datasets with high spatial resolution were acquired for the analysis of arteriovenous malformations (AVMs). One of the main tasks is the combination of the information of the 3D and 4D MRA image sequences. Initially, in the 3D MRA dataset the vessel system is segmented and a 3D surface model is generated. Then, temporal intensity curves are analyzed voxelwise in the 4D MRA image sequences. A curve fitting of the temporal intensity curves to a patient individual reference curve is used to extract the bolus arrival times in the 4D MRA sequences. After non-linear registration of both MRA datasets the extracted hemodynamic information is transferred to the surface model where the time points of inflow can be visualized color coded dynamically over time. The dynamic visualizations computed using the curve fitting method for the estimation of the bolus arrival times were rated superior compared to those computed using conventional approaches for bolus arrival time estimation. In summary the procedure suggested allows a dynamic visualization of the individual hemodynamic situation and better understanding during the visual evaluation of cerebral vascular diseases.

  10. An automated inverse analysis system using neural networks and computational mechanics with its application to identification of 3-D crack shape hidden in solid

    International Nuclear Information System (INIS)

    This paper describes a new inverse analysis system using the hierarchical (multilayer) neural networks and the computational mechanics. The present inverse analysis basically consists of the following three subprocesses: by parametrically varying system parameters, their corresponding responses of the system are calculated through computational mechanics simulations, each of which is an ordinary direct analysis. Each data pair of system parameters system responses is called training pattern; the back-propagation neural network is iteratively trained using a number of training patterns. The system responses are given to the input units of the network, while the system parameters to be identified are given to its output units as teacher signal; some system responses measured are given to the well trained network, which immediately outputs appropriate system parameters even for untrained patterns. This is an inverse analysis. To demonstrate its practical performances, the present system is applied to identify locations and shapes of two adjacent dissimilar surface cracks hidden in a pipe with the electric potential drop method. The results clearly show that the present system is very efficient and accurate. (author). 7 refs., 10 figs

  11. The development of a 3D risk analysis method.

    Science.gov (United States)

    I, Yet-Pole; Cheng, Te-Lung

    2008-05-01

    Much attention has been paid to the quantitative risk analysis (QRA) research in recent years due to more and more severe disasters that have happened in the process industries. Owing to its calculation complexity, very few software, such as SAFETI, can really make the risk presentation meet the practice requirements. However, the traditional risk presentation method, like the individual risk contour in SAFETI, is mainly based on the consequence analysis results of dispersion modeling, which usually assumes that the vapor cloud disperses over a constant ground roughness on a flat terrain with no obstructions and concentration fluctuations, which is quite different from the real situations of a chemical process plant. All these models usually over-predict the hazardous regions in order to maintain their conservativeness, which also increases the uncertainty of the simulation results. On the other hand, a more rigorous model such as the computational fluid dynamics (CFD) model can resolve the previous limitations; however, it cannot resolve the complexity of risk calculations. In this research, a conceptual three-dimensional (3D) risk calculation method was proposed via the combination of results of a series of CFD simulations with some post-processing procedures to obtain the 3D individual risk iso-surfaces. It is believed that such technique will not only be limited to risk analysis at ground level, but also be extended into aerial, submarine, or space risk analyses in the near future.

  12. Applications of the computer codes FLUX2D and PHI3D for the electromagnetic analysis of compressed magnetic field generators and power flow channels

    International Nuclear Information System (INIS)

    The authors present the results of three electromagnetic field problems for compressed magnetic field generators and their associated power flow channels. The first problem is the computation of the transient magnetic field in a two-dimensional model of a helical generator during loading. The second problem is the three-dimensional eddy current patterns in a section of an armature beneath a bifurcation point of a helical winding. The authors' third problem is the calculation of the three-dimensional electrostatic fields in a region known as the post-hole convolute in which a rod connects the inner and outer walls of a system of three concentric cylinders through a hole in the middle cylinder. While analytic solutions exist for many electromagnetic filed problems in cases of special and ideal geometries, the solution of these and similar problems for the proper analysis and design of compressed magnetic field generators and their related hardware require computer simulations

  13. COMPUTER AIDED DESIGN IN URBAN ARHITECTURE 3D MODELING

    OpenAIRE

    Nicolae Radu MARSANU; Silvia Mihaela RUSU

    2010-01-01

    The gap from the PC made sketches with the help of the china ink pen and ruler to the digitised drawing boards, high diagonal monitors and 3D projecting is truly spectacular. The increasingly efficient and more specialized programs allow the architects a whole range of facilities providing drawing commands and changes very easy to use, automatic rating, operating simultaneously in multiple windows, building sections and extracts of the plan, 3D views design and even projecting in virtual real...

  14. Computation of Electrostatic Properties of 3D MEMS Structures

    CERN Document Server

    Majumdar, N

    2006-01-01

    Micro-Electro-Mechanical Systems (MEMS) normally have fixed or moving structures with cross-sections of the order of microns ($\\mu m$) and lengths of the order of tens or hundreds of microns. These structures are often plates or array of thin beams which, owing to their smallness, can be moved or deflected easily through the application of low voltages. Since electrostatic forces play a very major role in maneuvering these devices, a thorough understanding of the electrostatic properties of these structures is of critical importance, especially in the design phase of MEMS. In many cases, the electrostatic analysis of MEMS is carried out using boundary element method (BEM), while the structural analysis is carried out using finite element method (FEM). In this paper, we focus on accurate electrostatic analysis of MEMS using BEM. In particular, we consider the problem of computing the charge distribution and capacitance of thin conducting plates relevant to the numerical simulation of MEMS. The reason behind th...

  15. 3-D Imaging of Cleat and Micro-cleat Characteristics, South Walker Creek Coals, Bowen Basin, Australia: Microfocus X-ray Computed Tomography Analysis

    Directory of Open Access Journals (Sweden)

    Asep Kurnia Permana

    2014-06-01

    Full Text Available DOI: 10.17014/ijog.v7i1.131The Permian coals of the South Walker Creek area have a moderately to highly developed cleat system. The cleat fractures are well developed in both bright and dull bands, and generally parallel, inclined or perpendicular to the bedding planes of the seam, with the spaces open or filled by mineral matter, such as clay and carbonate minerals. Microfocus X-ray computed tomography (CT technique was performed to identify cleat characteristics in the coal seams. This technique allows visualizing of microcleat distribution and mineralization in three dimensional images. Cleat mineralization in the coal seam occurs either as single mineral (monomineralic or intermixed mineral (polymineralic masses. The cross cutting relationship was shown by X-ray CT scan analysis. The timing of microcleat formation in the coal seam from early to late is carbonate minerals, clay minerals (kaolinite plus minor high density (rutile or anatase phases. Thus, a high resolution of microfocus X-ray CT does not only provides a better visualization, but also could identify microcleat orientation, cleat mineralization, and generation of microcleat.

  16. Software-based geometry operations for 3D computer graphics

    NARCIS (Netherlands)

    Sima, M.; Iancu, D.; Glossner, J.; Schulte, M.; Mamidi, S.

    2006-01-01

    In order to support a broad dynamic range and a high degree of precision, many of 3D renderings fundamental algorithms have been traditionally performed in floating-point. However, fixed-point data representation is preferable over floatingpoint representation in graphics applications on embedded de

  17. From Digital to Physical: Computational Aspects of 3D Manufacturing

    OpenAIRE

    Baecher, Moritz Niklaus

    2013-01-01

    The desktop publishing revolution of the 1980s is currently repeating itself in 3D, referred to as desktop manufacturing. Online services such as Shapeways have become available, making personalized manufacturing on cutting edge additive manufacturing (AM) technologies accessible to a broad audience. Affordable desktop printers will soon take over, enabling people to fabricate

  18. Generalized Method of Variational Analysis for 3-D Flow

    Institute of Scientific and Technical Information of China (English)

    兰伟仁; 黄思训; 项杰

    2004-01-01

    The generalized method of variational analysis (GMVA) suggested for 2-D wind observations by Huang et al. is extended to 3-D cases. Just as in 2-D cases, the regularization idea is applied. But due to the complexity of the 3-D cases, the vertical vorticity is taken as a stable functional. The results indicate that wind observations can be both variationally optimized and filtered. The efficiency of GMVA is also checked in a numerical test. Finally, 3-D wind observations with random disturbances are manipulated by GMVA after being filtered.

  19. A Computer Vision Method for 3D Reconstruction of Curves-Marked Free-Form Surfaces

    Institute of Scientific and Technical Information of China (English)

    Xiong Hanwei; Zhang Xiangwei

    2001-01-01

    Visual method is now broadly used in reverse engineering for 3D reconstruction. Thetraditional computer vision methods are feature-based, i.e., they require that the objects must revealfeatures owing to geometry or textures. For textureless free-form surfaces, dense feature points areadded artificially. In this paper, a new method is put forward combining computer vision with CAGD.The surface is subdivided into N-side Gregory patches using marked curves, and a stereo algorithm isused to reconstruct the curves. Then, the cross boundary tangent vector is computed throughreflectance analysis. At last, the whole surface can be reconstructed by jointing these patches withG1 continuity.

  20. 3D image analysis of abdominal aortic aneurysm

    Science.gov (United States)

    Subasic, Marko; Loncaric, Sven; Sorantin, Erich

    2002-05-01

    This paper presents a method for 3-D segmentation of abdominal aortic aneurysm from computed tomography angiography images. The proposed method is automatic and requires minimal user assistance. Segmentation is performed in two steps. First inner and then outer aortic border is segmented. Those two steps are different due to different image conditions on two aortic borders. Outputs of these two segmentations give a complete 3-D model of abdominal aorta. Such a 3-D model is used in measurements of aneurysm area. The deformable model is implemented using the level-set algorithm due to its ability to describe complex shapes in natural manner which frequently occur in pathology. In segmentation of outer aortic boundary we introduced some knowledge based preprocessing to enhance and reconstruct low contrast aortic boundary. The method has been implemented in IDL and C languages. Experiments have been performed using real patient CTA images and have shown good results.

  1. Performance Analysis of a 3D Ionosphere Tomographic Model

    Institute of Scientific and Technical Information of China (English)

    Liu Zhi-zhao; Gao Yang

    2003-01-01

    A 3D high precision ionospheric model is developed based on tomography technique. This tomographic model employs GPS data observed by an operational network of dual-frequency GPS receivers. The methodology of developing a 3D ionospheric tomography model is briefly summarized. However emphasis is put on the analysis and evaluation of the accuracy variation of 3D ionosphere modeling with respect to the change of GPS data cutoff angle.Three typical cutoff angle values (15°, 20° and 25°) are tested. For each testing cutoff angle, the performances of the3D ionospheric model constructed using tomography technique are assessed by calibrating the model predicted ionospheric TEC with the GPS measured TEC and by employing the model predicted TEC to a practical GPS positioning application single point positioning (SPP).Test results indicate the 3D model predicted VTEC has about 0.4 TECU improvement in accuracy when cutoff angle rises from 15° to 20°. However, no apparent improvement is found from 20° to 25°. The model's improvement is also validated by the better SPP accuracy of 3D model than its counterpart-dual frequency model in the 20° and 25° cases.

  2. The computer simulation of 3d gas dynamics in a gas centrifuge

    Science.gov (United States)

    Borman, V. D.; Bogovalov, S. V.; Borisevich, V. D.; Tronin, I. V.; Tronin, V. N.

    2016-09-01

    We argue on the basis of the results of 2D analysis of the gas flow in gas centrifuges that a reliable calculation of the circulation of the gas and gas content in the gas centrifuge is possible only in frameworks of 3D numerical simulation of gas dynamics in the gas centrifuge (hereafter GC). The group from National research nuclear university, MEPhI, has created a computer code for 3D simulation of the gas flow in GC. The results of the computer simulations of the gas flows in GC are presented. A model Iguassu centrifuge is explored for the simulations. A nonaxisymmetric gas flow is produced due to interaction of the hypersonic rotating flow with the scoops for extraction of the product and waste flows from the GC. The scoops produce shock waves penetrating into a working camera of the GC and form spiral waves there.

  3. 3D object-oriented image analysis in 3D geophysical modelling

    DEFF Research Database (Denmark)

    Fadel, I.; van der Meijde, M.; Kerle, N.;

    2015-01-01

    Non-uniqueness of satellite gravity interpretation has traditionally been reduced by using a priori information from seismic tomography models. This reduction in the non-uniqueness has been based on velocity-density conversion formulas or user interpretation of the 3D subsurface structures (objects......) approach was implemented to extract the 3D subsurface structures from geophysical data. The approach was applied on a 3D shear wave seismic tomography model of the central part of the East African Rift System. Subsequently, the extracted 3D objects from the tomography model were reconstructed in the 3D...... interactive modelling environment IGMAS+, and their density contrast values were calculated using an object-based inversion technique to calculate the forward signal of the objects and compare it with the measured satellite gravity. Thus, a new object-based approach was implemented to interpret and extract...

  4. 3-D Imaging of Cleat and Micro-cleat Characteristics, South Walker Creek Coals, Bowen Basin, Australia: Microfocus X-ray Computed Tomography Analysis

    OpenAIRE

    Asep Kurnia Permana

    2014-01-01

    DOI: 10.17014/ijog.v7i1.131The Permian coals of the South Walker Creek area have a moderately to highly developed cleat system. The cleat fractures are well developed in both bright and dull bands, and generally parallel, inclined or perpendicular to the bedding planes of the seam, with the spaces open or filled by mineral matter, such as clay and carbonate minerals. Microfocus X-ray computed tomography (CT) technique was performed to identify cleat characteristics in the coal seams. This tec...

  5. Computer-assisted three-dimensional surgical planning and simulation: 3D virtual osteotomy.

    Science.gov (United States)

    Xia, J; Ip, H H; Samman, N; Wang, D; Kot, C S; Yeung, R W; Tideman, H

    2000-02-01

    A computer-assisted three-dimensional virtual osteotomy system for orthognathic surgery (CAVOS) is presented. The virtual reality workbench is used for surgical planning. The surgeon immerses in a virtual reality environment with stereo eyewear, holds a virtual "scalpel" (3D Mouse) and operates on a "real" patient (3D visualization) to obtain pre-surgical prediction (3D bony segment movements). Virtual surgery on a computer-generated 3D head model is simulated and can be visualized from any arbitrary viewing point in a personal computer system.

  6. 3D Regression Heat Map Analysis of Population Study Data.

    Science.gov (United States)

    Klemm, Paul; Lawonn, Kai; Glaßer, Sylvia; Niemann, Uli; Hegenscheid, Katrin; Völzke, Henry; Preim, Bernhard

    2016-01-01

    Epidemiological studies comprise heterogeneous data about a subject group to define disease-specific risk factors. These data contain information (features) about a subject's lifestyle, medical status as well as medical image data. Statistical regression analysis is used to evaluate these features and to identify feature combinations indicating a disease (the target feature). We propose an analysis approach of epidemiological data sets by incorporating all features in an exhaustive regression-based analysis. This approach combines all independent features w.r.t. a target feature. It provides a visualization that reveals insights into the data by highlighting relationships. The 3D Regression Heat Map, a novel 3D visual encoding, acts as an overview of the whole data set. It shows all combinations of two to three independent features with a specific target disease. Slicing through the 3D Regression Heat Map allows for the detailed analysis of the underlying relationships. Expert knowledge about disease-specific hypotheses can be included into the analysis by adjusting the regression model formulas. Furthermore, the influences of features can be assessed using a difference view comparing different calculation results. We applied our 3D Regression Heat Map method to a hepatic steatosis data set to reproduce results from a data mining-driven analysis. A qualitative analysis was conducted on a breast density data set. We were able to derive new hypotheses about relations between breast density and breast lesions with breast cancer. With the 3D Regression Heat Map, we present a visual overview of epidemiological data that allows for the first time an interactive regression-based analysis of large feature sets with respect to a disease. PMID:26529689

  7. 3D Regression Heat Map Analysis of Population Study Data.

    Science.gov (United States)

    Klemm, Paul; Lawonn, Kai; Glaßer, Sylvia; Niemann, Uli; Hegenscheid, Katrin; Völzke, Henry; Preim, Bernhard

    2016-01-01

    Epidemiological studies comprise heterogeneous data about a subject group to define disease-specific risk factors. These data contain information (features) about a subject's lifestyle, medical status as well as medical image data. Statistical regression analysis is used to evaluate these features and to identify feature combinations indicating a disease (the target feature). We propose an analysis approach of epidemiological data sets by incorporating all features in an exhaustive regression-based analysis. This approach combines all independent features w.r.t. a target feature. It provides a visualization that reveals insights into the data by highlighting relationships. The 3D Regression Heat Map, a novel 3D visual encoding, acts as an overview of the whole data set. It shows all combinations of two to three independent features with a specific target disease. Slicing through the 3D Regression Heat Map allows for the detailed analysis of the underlying relationships. Expert knowledge about disease-specific hypotheses can be included into the analysis by adjusting the regression model formulas. Furthermore, the influences of features can be assessed using a difference view comparing different calculation results. We applied our 3D Regression Heat Map method to a hepatic steatosis data set to reproduce results from a data mining-driven analysis. A qualitative analysis was conducted on a breast density data set. We were able to derive new hypotheses about relations between breast density and breast lesions with breast cancer. With the 3D Regression Heat Map, we present a visual overview of epidemiological data that allows for the first time an interactive regression-based analysis of large feature sets with respect to a disease.

  8. 3D-Aided-Analysis Tool for Lunar Rover

    Institute of Scientific and Technical Information of China (English)

    ZHANG Peng; LI Guo-peng; REN Xin; LIU Jian-jun; GAO Xing-ye; ZOU Xiao-duan

    2013-01-01

    3D-Aided-Analysis Tool (3DAAT) which is a virtual reality system is built up in this paper. 3DAAT is integrated with kinematics and dynamics model of rover as well as real lunar surface terrain mode. Methods of modeling which are proposed in this paper include constructing lunar surface, constructing 3D model of lander and rover, building up kinematic model of rover body. Photogrammetry technique and the remote sensing information are used to generate the terrain model of lunar surface. According to the implementation result, 3DAAT is an effective assist system for making exploration plan and analyzing the status of rover.

  9. AN ANALYSIS OF 3D FINITE CRACKED BODIES

    Institute of Scientific and Technical Information of China (English)

    Tao Weiming; Guo Yimu; Cao Zhiyuan

    2001-01-01

    The new-type traction boundary integral equations developed by Hu and with no hyper singular integral are applied to analysis of 3D finite cracked bodies. A numerical algorithm for general 3D problems and a semi-analytical one for axisymmetric problems are presented. Some examples of thick plates and cylindrical columns including penny-shaped crack(s), and rectangular plates including an elliptical crack normal to the surface are analyzed. The comparison between present results and those in literature shows the high accuracy and effectiveness of the present method.

  10. Validation of OPERA3D PCMI Analysis Code

    International Nuclear Information System (INIS)

    This report will describe introduction of validation of OPERA3D code, and validation results that are directly related with PCMI phenomena. OPERA3D was developed for the PCMI analysis and validated using the in-pile measurement data. Fuel centerline temperature and clad strain calculation results shows close expectations with measurement data. Moreover, 3D FEM fuel model of OPERA3D shows slight hour glassing behavior of fuel pellet in contact case. Further optimization will be conducted for future application of OPERA3D code. Nuclear power plant consists of many complicated systems, and one of the important objects of all the systems is maintaining nuclear fuel integrity. However, it is inevitable to experience PCMI (Pellet Cladding Mechanical Interaction) phenomena at current operating reactors and next generation reactors for advanced safety and economics as well. To evaluate PCMI behavior, many studies are on-going to develop 3-dimensional fuel performance evaluation codes. Moreover, these codes are essential to set the safety limits for the best estimated PCMI phenomena aimed for high burnup fuel

  11. 3D Network Analysis for Indoor Space Applications

    Science.gov (United States)

    Tsiliakou, E.; Dimopoulou, E.

    2016-10-01

    Indoor space differs from outdoor environments, since it is characterized by a higher level of structural complexity, geometry, as well as topological relations. Indoor space can be considered as the most important component in a building's conceptual modelling, on which applications such as indoor navigation, routing or analysis are performed. Therefore, the conceptual meaning of sub spaces or the activities taking place in physical building boundaries (e.g. walls), require the comprehension of the building's indoor hierarchical structure. The scope of this paper is to perform 3D network analysis in a building's interior and is structured as follows: In Section 1 the definition of indoor space is provided and indoor navigation requirements are analysed. Section 2 describes the processes of indoor space modeling, as well as routing applications. In Section 3, a case study is examined involving a 3D building model generated in CityEngine (exterior shell) and ArcScene (interior parts), in which the use of commercially available software tools (ArcGIS, ESRI), in terms of indoor routing and 3D network analysis, are explored. The fundamentals of performing 3D analysis with the ArcGIS Network Analyst extension were tested. Finally a geoprocessing model was presented, which was specifically designed to be used to interactively find the best route in ArcScene. The paper ends with discussion and concluding remarks on Section 4.

  12. Numerical analysis of 3-D potential flow in centrifugal turbomachines

    Science.gov (United States)

    Daiguji, H.

    1983-09-01

    A numerical method is developed for analysing a three-dimensional steady incompressible potential flow through an impeller in centrifugal turbomachines. The method is the same as the previous method which was developed for the axial flow turbomachines, except for some treatments in the downstream region. In order to clarify the validity and limitation of the method, a comparison with the existing experimental data and numerical results is made for radial flow compressor impellers. The calculated blade surface pressure distributions almost coincide with the quasi-3-D calculation by Krimerman and Adler (1978), but are different partly from the quasi-3-D calculation using one meridional flow analysis. It is suggested from this comparison that the flow through an impeller with high efficiency near the design point can be predicted by this fully 3-D numerical method.

  13. The 3d International Workshop on Computational Electronics

    Science.gov (United States)

    Goodnick, Stephen M.

    1994-09-01

    The Third International Workshop on Computational Electronics (IWCE) was held at the Benson Hotel in downtown Portland, Oregon, on May 18, 19, and 20, 1994. The workshop was devoted to a broad range of topics in computational electronics related to the simulation of electronic transport in semiconductors and semiconductor devices, particularly those which use large computational resources. The workshop was supported by the National Science Foundation (NSF), the Office of Naval Research and the Army Research Office, as well as local support from the Oregon Joint Graduate Schools of Engineering and the Oregon Center for Advanced Technology Education. There were over 100 participants in the Portland workshop, of which more than one quarter represented research groups outside of the United States from Austria, Canada, France, Germany, Italy, Japan, Switzerland, and the United Kingdom. There were a total 81 papers presented at the workshop, 9 invited talks, 26 oral presentations and 46 poster presentations. The emphasis of the contributions reflected the interdisciplinary nature of computational electronics with researchers from the Chemistry, Computer Science, Mathematics, Engineering, and Physics communities participating in the workshop.

  14. Computational 3-D Model of the Human Respiratory System

    Science.gov (United States)

    We are developing a comprehensive, morphologically-realistic computational model of the human respiratory system that can be used to study the inhalation, deposition, and clearance of contaminants, while being adaptable for age, race, gender, and health/disease status. The model ...

  15. Automatic procedure for realistic 3D finite element modelling of human brain for bioelectromagnetic computations

    Energy Technology Data Exchange (ETDEWEB)

    Aristovich, K Y; Khan, S H, E-mail: kirill.aristovich.1@city.ac.u [School of Engineering and Mathematical Sciences, City University London, Northampton Square, London EC1V 0HB (United Kingdom)

    2010-07-01

    Realistic computer modelling of biological objects requires building of very accurate and realistic computer models based on geometric and material data, type, and accuracy of numerical analyses. This paper presents some of the automatic tools and algorithms that were used to build accurate and realistic 3D finite element (FE) model of whole-brain. These models were used to solve the forward problem in magnetic field tomography (MFT) based on Magnetoencephalography (MEG). The forward problem involves modelling and computation of magnetic fields produced by human brain during cognitive processing. The geometric parameters of the model were obtained from accurate Magnetic Resonance Imaging (MRI) data and the material properties - from those obtained from Diffusion Tensor MRI (DTMRI). The 3D FE models of the brain built using this approach has been shown to be very accurate in terms of both geometric and material properties. The model is stored on the computer in Computer-Aided Parametrical Design (CAD) format. This allows the model to be used in a wide a range of methods of analysis, such as finite element method (FEM), Boundary Element Method (BEM), Monte-Carlo Simulations, etc. The generic model building approach presented here could be used for accurate and realistic modelling of human brain and many other biological objects.

  16. Computation of Edge-Edge-Edge Events Based on Conicoid Theory for 3-D Object Recognition

    Institute of Scientific and Technical Information of China (English)

    WU Chenye; MA Huimin

    2009-01-01

    The availability of a good viewpoint space partition is crucial in three dimensional (3-D) object rec-ognition on the approach of aspect graph. There are two important events depicted by the aspect graph ap-proach, edge-edge-edge (EEE) events and edge-vertex (EV) events. This paper presents an algorithm to compute EEE events by characteristic analysis based on conicoid theory, in contrast to current algorithms that focus too much on EV events and often overlook the importance of EEE events. Also, the paper provides a standard flowchart for the viewpoint space partitioning based on aspect graph theory that makes it suitable for perspective models. The partitioning result best demonstrates the algorithm's efficiency with more valu-able viewpoints found with the help of EEE events, which can definitely help to achieve high recognition rate for 3-D object recognition.

  17. 3-D Experimental Fracture Analysis at High Temperature

    Energy Technology Data Exchange (ETDEWEB)

    John H. Jackson; Albert S. Kobayashi

    2001-09-14

    T*e, which is an elastic-plastic fracture parameter based on incremental theory of plasticity, was determined numerically and experimentally. The T*e integral of a tunneling crack in 2024-T3 aluminum, three point bend specimen was obtained through a hybrid analysis of moire interferometry and 3-D elastic-plastic finite element analysis. The results were verified by the good agreement between the experimentally and numerically determined T*e on the specimen surface.

  18. Effects of multiple conformers per compound upon 3-D similarity search and bioassay data analysis

    Directory of Open Access Journals (Sweden)

    Kim Sunghwan

    2012-11-01

    Full Text Available Abstract Background To improve the utility of PubChem, a public repository containing biological activities of small molecules, the PubChem3D project adds computationally-derived three-dimensional (3-D descriptions to the small-molecule records contained in the PubChem Compound database and provides various search and analysis tools that exploit 3-D molecular similarity. Therefore, the efficient use of PubChem3D resources requires an understanding of the statistical and biological meaning of computed 3-D molecular similarity scores between molecules. Results The present study investigated effects of employing multiple conformers per compound upon the 3-D similarity scores between ten thousand randomly selected biologically-tested compounds (10-K set and between non-inactive compounds in a given biological assay (156-K set. When the “best-conformer-pair” approach, in which a 3-D similarity score between two compounds is represented by the greatest similarity score among all possible conformer pairs arising from a compound pair, was employed with ten diverse conformers per compound, the average 3-D similarity scores for the 10-K set increased by 0.11, 0.09, 0.15, 0.16, 0.07, and 0.18 for STST-opt, CTST-opt, ComboTST-opt, STCT-opt, CTCT-opt, and ComboTCT-opt, respectively, relative to the corresponding averages computed using a single conformer per compound. Interestingly, the best-conformer-pair approach also increased the average 3-D similarity scores for the non-inactive–non-inactive (NN pairs for a given assay, by comparable amounts to those for the random compound pairs, although some assays showed a pronounced increase in the per-assay NN-pair 3-D similarity scores, compared to the average increase for the random compound pairs. Conclusion These results suggest that the use of ten diverse conformers per compound in PubChem bioassay data analysis using 3-D molecular similarity is not expected to increase the separation of non

  19. 3D neutron computed tomography. Requirements and applications

    International Nuclear Information System (INIS)

    Other than X-rays, neutrons can penetrate most metals easily while delivering a high contrast for many light-weight elements. Especially their high sensitivity for hydrogen makes them a valuable tool for the detection of organic materials like lubricants, plastics or sealants within metal housings. Neutron radiography and tomography complement the application of X-ray for the inspection of complex and critical components like in automotive and aerospace applications. An overview about the technical and mathematical differences between neutron and X-ray tomography is given and the imperfections and limitations of a neutron setup are shown. Several examples of technical neutron computed tomography are given. (author)

  20. On applicability of the 3D nodal code DYN3D for the analysis of SFR cores

    International Nuclear Information System (INIS)

    DYN3D is an advanced multi-group nodal diffusion code originally developed for the 3D steady-state and transient analysis of the Light Water Reactor (LWR) systems with square and hexagonal fuel assembly geometries. The main objective of this work is to demonstrate the feasibility of using DYN3D for the modeling of Sodium cooled Fast Reactors (SFRs). In this study a prototypic European Sodium Fast Reactor (ESFR) core is simulated by DYN3D using homogenized multi-group cross sections produced with Monte Carlo (MC) reactor physics code Serpent. The results of the full core DYN3D calculations are in a very good agreement with the reference full core Serpent MC solution. (author)

  1. Suspected feigned knee extensor weakness: usefulness of 3D gait analysis. Case report.

    Science.gov (United States)

    Chaler, Joaquim; Müller, Bertram; Maiques, Anna; Pujol, Eduard

    2010-07-01

    The purpose of the present case report is to show the potential for use of 3D gait analysis as an assessment method of feigned muscle weakness. We describe a patient complaining of right leg pain and weakness. Physical examination showed severe quadriceps muscle weakness in a highly abnormal gait pattern context. Conventional diagnostic workup did not show any relevant findings. Three-dimensional (3D) gait analysis was performed with a 3D motion capture system. Joint angles, internal moments and powers were computed from the motion data. Lower leg muscle surface-electromyography was also performed. During the late stance phase, flexor moment and negative power peaks (indicating eccentric knee extensor activity) were generated in the knee, together with relevant Rectus femoris activity. All findings were highly inconsistent with true quadriceps weakness and gave objective ground to suspect insincerity of patient complaints. 3D gait analysis might be a valuable clinical assessment tool in suspected feigned lower limb muscle weakness.

  2. 3D Guided Wave Motion Analysis on Laminated Composites

    Science.gov (United States)

    Tian, Zhenhua; Leckey, Cara; Yu, Lingyu

    2013-01-01

    Ultrasonic guided waves have proved useful for structural health monitoring (SHM) and nondestructive evaluation (NDE) due to their ability to propagate long distances with less energy loss compared to bulk waves and due to their sensitivity to small defects in the structure. Analysis of actively transmitted ultrasonic signals has long been used to detect and assess damage. However, there remain many challenging tasks for guided wave based SHM due to the complexity involved with propagating guided waves, especially in the case of composite materials. The multimodal nature of the ultrasonic guided waves complicates the related damage analysis. This paper presents results from parallel 3D elastodynamic finite integration technique (EFIT) simulations used to acquire 3D wave motion in the subject laminated carbon fiber reinforced polymer composites. The acquired 3D wave motion is then analyzed by frequency-wavenumber analysis to study the wave propagation and interaction in the composite laminate. The frequency-wavenumber analysis enables the study of individual modes and visualization of mode conversion. Delamination damage has been incorporated into the EFIT model to generate "damaged" data. The potential for damage detection in laminated composites is discussed in the end.

  3. Digital 3D Facial Reconstruction Based on Computed Tomography

    OpenAIRE

    Andersson, Björn; Valfridsson, Martin

    2005-01-01

    Despite the introduction of DNA-analysis for identification of human remains (1997-2000) several cases exist where the deceased remain unidentified. Approximately ten percent of unknown deceased persons can not be identified by dental status or other present methods. During the year 2003 alone, seven individuals, in Sweden, remain unidentified. Increase in travel in Europe will lead to more discoveries of foreign human remains in Sweden. In these cases, dental and medical records are often u...

  4. CudaPre3D: An Alternative Preprocessing Algorithm for Accelerating 3D Convex Hull Computation on the GPU

    Directory of Open Access Journals (Sweden)

    MEI, G.

    2015-05-01

    Full Text Available In the calculating of convex hulls for point sets, a preprocessing procedure that is to filter the input points by discarding non-extreme points is commonly used to improve the computational efficiency. We previously proposed a quite straightforward preprocessing approach for accelerating 2D convex hull computation on the GPU. In this paper, we extend that algorithm to being used in 3D cases. The basic ideas behind these two preprocessing algorithms are similar: first, several groups of extreme points are found according to the original set of input points and several rotated versions of the input set; then, a convex polyhedron is created using the found extreme points; and finally those interior points locating inside the formed convex polyhedron are discarded. Experimental results show that: when employing the proposed preprocessing algorithm, it achieves the speedups of about 4x on average and 5x to 6x in the best cases over the cases where the proposed approach is not used. In addition, more than 95 percent of the input points can be discarded in most experimental tests.

  5. 3D Computational Simulation of Calcium Leaching in Cement Matrices

    Directory of Open Access Journals (Sweden)

    Gaitero, J. J.

    2014-12-01

    Full Text Available Calcium leaching is a degradation process consisting in progressive dissolution of the cement paste by migration of calcium atoms to the aggressive solution. It is therefore, a complex phenomenon involving several phases and dissolution and diffusion processes simultaneously. Along this work, a new computational scheme for the simulation of the degradation process in three dimensions was developed and tested. The toolkit was used to simulate accelerated calcium leaching by a 6M ammonium nitrate solution in cement matrices. The obtained outputs were the three dimensional representation of the matrix and the physicochemical properties of individual phases as a consequence of the degradation process. This not only makes it possible to study the evolution of such properties as a function of time but also as a function of the position within the matrix. The obtained results are in good agreement with experimental values of the elastic modulus in degraded and undegraded samples.El lixiviado de calcio es un proceso de degradación consistente en la disolución progresiva de la pasta de cemento por la migración de los átomos de calcio a la disolución agresiva. Se trata por tanto de un fenómeno complejo que involucra simultáneamente diferentes fases y procesos de disolución y difusión. En este trabajo se desarrolló y probó una nueva herramienta computacional para la simulación del proceso de degradación en tres dimensiones. Para ello se simuló el lixiviado de calcio acelerado provocado por una disolución de nitrato amónico 6M en matrices de cemento. Como resultado se obtuvieron la representación tridimensional de la matriz y las propiedades físico-químicas sus fases a lo largo del tiempo. Esto permitió estudiar la evolución de dichas propiedades a lo largo del proceso de degradación así como en función de su posición dentro de la matriz. Los resultados obtenidos coinciden con los valores experimentales del módulo elástico tanto

  6. Practical limitations of cone-beam computed tomography in 3D cephalometry%Practical limitations of cone-beam computed tomography in3D cephalometry

    Institute of Scientific and Technical Information of China (English)

    Janalt Damstra; Zacharias Fourie; Yijin Ren

    2011-01-01

    3D cone beam computed tomography (CBCT) images offer a unique and new appreciation of the anatomical structures and underlying anomalies not possible with conventional radiographs.However,in almost all aspects of CBCT imaging,from utilization to application,inherent limitations and pitfalls exist.Importantly,these inherent limitations and pitfalls have practical implications which need to be addressed before the potential of this technology can be fully realized.The purpose of this review was to explore the current limitations and pitfalls associated with CBCT imaging to allow for better and more accurate understanding of the possibilities this imaging modality could offer,particularly pertaining to 3D cephalometry.

  7. 3D-CANVENT : an integrated computer package for simulating the underground mine ventilation systems

    Energy Technology Data Exchange (ETDEWEB)

    Li, G.; Kocsis, C.; Hardcastle, S. [Natural Resources Canada, Sudbury, ON (Canada). CANMET Mining and Mineral Sciences Laboratories

    2009-07-01

    Cool, fresh air is needed in the working areas of underground mines in order to remove pollutants created during mining operations and to create satisfactory air quality conditions. 3D-CANVENT is a computer package for simulating difficult underground ventilation systems that comprise airways, fans and control devices. The package has been recently upgraded and enhanced with several new features and capabilities. This paper discussed the advanced features and capabilities of 3D-CANVENT, as well as the improvements within its solver and the utilities that greatly enhanced data entry and processing. These features include fan libraries for archiving and retrieving fan data; auto-backup of ventilation models and simulation results; animation of airflow through ventilation networks; and integrated 3D processor for editing ventilation models and viewing simulation results in different windows and orientations. The paper also outlined and discussed the technology that incorporated the air density and natural ventilation pressure in ventilation analysis. A verification example was also provided. A new tool for sensitivity study on ventilation parameter changes was also proposed to further enhance the software. 7 refs., 7 figs.

  8. Static and dynamic stability analysis using 3D-DDA with incision body scheme

    Institute of Scientific and Technical Information of China (English)

    Wang Jianquan; Lin Gao; Liu Jun

    2006-01-01

    Discontinuous deformation analysis (DDA) provides a powerful numerical tool for the analysis of discontinuous media. This method has been widely applied to the 2D analysis of discontinuous deformation. However, it is hindered from analyzing 3D rock engineering problems mainly due to the lack of reliable 3D contact detection algorithms for polyhedra.Contact detection is a key in 3-D DDA analysis. The limitations and advantages of existing contact detection schemes are discussed in this paper, and a new approach, called the incision body (IB), is proposed, taking into account the advantages of the existing methods. A computer code 3DIB, which uses the IB scheme as a 3D contact detection algorithm, was programmed with Visual C++. Static and dynamic stability analysis for three realistic engineering problems has been carried out. Furthermore, the focus is on studying the stability of a gravity dam on jointed rock foundation and dynamic stability of a fractured gravity dam subject to earthquake shaking. The simulation results show that the program 3DIB and incision body scheme are capable of detecting 3D block contacts correctly and hence simulating the open-close and slide process of jointed block masses. In addition, the code 3DIB could provide an effective tool for evaluating the safety of 3D dam structures, which is quite important for engineering problems.

  9. Computational Approach to 3D Modeling of the Lymph Node Geometry

    Directory of Open Access Journals (Sweden)

    Alexey Kislitsyn

    2015-05-01

    Full Text Available In this study we present a computational approach to the generation of the major geometric structures of an idealized murine lymph node (LN. In this generation, we consider the major compartments such as the subcapsular sinus, B cell follicles, trabecular and medullar sinuses, blood vessels and the T cell zone with a primary focus on the fibroblastic reticular cell (FRC network. Confocal microscopy data of LN macroscopic structures and structural properties of the FRC network have been generated and utilized in the present model. The methodology sets a library of modules that can be used to assemble a solid geometric LN model and subsequently generate an adaptive mesh model capable of implementing transport phenomena. Overall, based on the use of high-resolution confocal microscopy and morphological analysis of cell 3D reconstructions, we have developed a computational model of the LN geometry, suitable for further investigation in studies of fluid transport and cell migration in this immunologically essential organ.

  10. Detection of Connective Tissue Disorders from 3D Aortic MR Images Using Independent Component Analysis

    DEFF Research Database (Denmark)

    Hansen, Michael Sass; Zhao, Fei; Zhang, Honghai;

    2006-01-01

    A computer-aided diagnosis (CAD) method is reported that allows the objective identification of subjects with connective tissue disorders from 3D aortic MR images using segmentation and independent component analysis (ICA). The first step to extend the model to 4D (3D + time) has also been taken....... ICA is an effective tool for connective tissue disease detection in the presence of sparse data using prior knowledge to order the components, and the components can be inspected visually. 3D+time MR image data sets acquired from 31 normal and connective tissue disorder subjects at end-diastole (R......-wave peak) and at 45\\$\\backslash\\$% of the R-R interval were used to evaluate the performance of our method. The automated 3D segmentation result produced accurate aortic surfaces covering the aorta. The CAD method distinguished between normal and connective tissue disorder subjects with a classification...

  11. Advancements in 3D Structural Analysis of Geothermal Systems

    Energy Technology Data Exchange (ETDEWEB)

    Siler, Drew L [Nevada Bureau of Mines and Geology, University of Nevada, Reno; Faulds, James E [Nevada Bureau of Mines and Geology, University of Nevada, Reno; Mayhew, Brett [Nevada Bureau of Mines and Geology, University of Nevada, Reno; McNamara, David [Department of Geothermal Science, GNS Science, NZ

    2013-06-23

    Robust geothermal activity in the Great Basin, USA is a product of both anomalously high regional heat flow and active fault-controlled extension. Elevated permeability associated with some fault systems provides pathways for circulation of geothermal fluids. Constraining the local-scale 3D geometry of these structures and their roles as fluid flow conduits is crucial in order to mitigate both the costs and risks of geothermal exploration and to identify blind (no surface expression) geothermal resources. Ongoing studies have indicated that much of the robust geothermal activity in the Great Basin is associated with high density faulting at structurally complex fault intersection/interaction areas, such as accommodation/transfer zones between discrete fault systems, step-overs or relay ramps in fault systems, intersection zones between faults with different strikes or different senses of slip, and horse-tailing fault terminations. These conceptualized models are crucial for locating and characterizing geothermal systems in a regional context. At the local scale, however, pinpointing drilling targets and characterizing resource potential within known or probable geothermal areas requires precise 3D characterization of the system. Employing a variety of surface and subsurface data sets, we have conducted detailed 3D geologic analyses of two Great Basin geothermal systems. Using EarthVision (Dynamic Graphics Inc., Alameda, CA) we constructed 3D geologic models of both the actively producing Brady’s geothermal system and a ‘greenfield’ geothermal prospect at Astor Pass, NV. These 3D models allow spatial comparison of disparate data sets in 3D and are the basis for quantitative structural analyses that can aid geothermal resource assessment and be used to pinpoint discrete drilling targets. The relatively abundant data set at Brady’s, ~80 km NE of Reno, NV, includes 24 wells with lithologies interpreted from careful analysis of cuttings and core, a 1

  12. Analysis of the of bones through 3D computerized tomography; Analise de estrutura ossea atraves de microtomografia computadorizada 3D

    Energy Technology Data Exchange (ETDEWEB)

    Lima, I.; Lopes, R.T. [Coordenacao dos Programas de Pos-Graduacao de Engenharia (COPPE), Rio de Janeiro, RJ (Brazil). Lab. de Instrumentacao Nuclear; Oliveira, L.F. [Universidade do Estado do Rio de Janeiro (UERJ), RJ (Brazil). Inst. de Fisica. Dept. de Fisica Aplicada e Termodinamica; Alves, J.M. [Universidade de Sao Paulo (USP), Sao Carlos, SP (Brazil). Escola de Engenharia

    2009-03-15

    This work shows the analysis of the internal structure of the bones samples through 3D micro tomography technique (3D-{mu}TC). The comprehension of the bone structure is particularly important when related to osteoporosis diagnosis because this implies in a deterioration of the trabecular bone architecture, which increases the fragility and the possibility to have bone fractures. Two bone samples (human calcaneous and Wistar rat femur) were used, and the method was a radiographic system in real time with an X Ray microfocus tube. The quantifications parameters are based on stereological principles and they are five: a bone volume fraction, trabecular number, the ratio between surface and bone volume, the trabecular thickness and the trabecular separation. The quantifications were done with a program developed especially for this purpose in Nuclear Instrumentation Laboratory - COPPE/UFRJ. This program uses as input the 3D reconstructions images and generates a table with the quantifications. The results of the human calcaneous quantifications are presented in tables 1 and 2, and the 3D reconstructions are illustrated in Figure 5. The Figure 6 illustrate the 2D reconstructed image and the Figure 7 the 3D visualization respectively of the Wistar femur sample. The obtained results show that the 3D-{mu}TC is a powerful technique that can be used to analyze bone microstructures. (author)

  13. Computer-based image analysis in radiological diagnostics and image-guided therapy 3D-Reconstruction, contrast medium dynamics, surface analysis, radiation therapy and multi-modal image fusion

    CERN Document Server

    Beier, J

    2001-01-01

    This book deals with substantial subjects of postprocessing and analysis of radiological image data, a particular emphasis was put on pulmonary themes. For a multitude of purposes the developed methods and procedures can directly be transferred to other non-pulmonary applications. The work presented here is structured in 14 chapters, each describing a selected complex of research. The chapter order reflects the sequence of the processing steps starting from artefact reduction, segmentation, visualization, analysis, therapy planning and image fusion up to multimedia archiving. In particular, this includes virtual endoscopy with three different scene viewers (Chap. 6), visualizations of the lung disease bronchiectasis (Chap. 7), surface structure analysis of pulmonary tumors (Chap. 8), quantification of contrast medium dynamics from temporal 2D and 3D image sequences (Chap. 9) as well as multimodality image fusion of arbitrary tomographical data using several visualization techniques (Chap. 12). Thus, the softw...

  14. A 3D-video-based computerized analysis of social and sexual interactions in rats.

    Directory of Open Access Journals (Sweden)

    Jumpei Matsumoto

    Full Text Available A large number of studies have analyzed social and sexual interactions between rodents in relation to neural activity. Computerized video analysis has been successfully used to detect numerous behaviors quickly and objectively; however, to date only 2D video recording has been used, which cannot determine the 3D locations of animals and encounters difficulties in tracking animals when they are overlapping, e.g., when mounting. To overcome these limitations, we developed a novel 3D video analysis system for examining social and sexual interactions in rats. A 3D image was reconstructed by integrating images captured by multiple depth cameras at different viewpoints. The 3D positions of body parts of the rats were then estimated by fitting skeleton models of the rats to the 3D images using a physics-based fitting algorithm, and various behaviors were recognized based on the spatio-temporal patterns of the 3D movements of the body parts. Comparisons between the data collected by the 3D system and those by visual inspection indicated that this system could precisely estimate the 3D positions of body parts for 2 rats during social and sexual interactions with few manual interventions, and could compute the traces of the 2 animals even during mounting. We then analyzed the effects of AM-251 (a cannabinoid CB1 receptor antagonist on male rat sexual behavior, and found that AM-251 decreased movements and trunk height before sexual behavior, but increased the duration of head-head contact during sexual behavior. These results demonstrate that the use of this 3D system in behavioral studies could open the door to new approaches for investigating the neuroscience of social and sexual behavior.

  15. Sensitivity Analysis of the Scattering-Based SARBM3D Despeckling Algorithm.

    Science.gov (United States)

    Di Simone, Alessio

    2016-01-01

    Synthetic Aperture Radar (SAR) imagery greatly suffers from multiplicative speckle noise, typical of coherent image acquisition sensors, such as SAR systems. Therefore, a proper and accurate despeckling preprocessing step is almost mandatory to aid the interpretation and processing of SAR data by human users and computer algorithms, respectively. Very recently, a scattering-oriented version of the popular SAR Block-Matching 3D (SARBM3D) despeckling filter, named Scattering-Based (SB)-SARBM3D, was proposed. The new filter is based on the a priori knowledge of the local topography of the scene. In this paper, an experimental sensitivity analysis of the above-mentioned despeckling algorithm is carried out, and the main results are shown and discussed. In particular, the role of both electromagnetic and geometrical parameters of the surface and the impact of its scattering behavior are investigated. Furthermore, a comprehensive sensitivity analysis of the SB-SARBM3D filter against the Digital Elevation Model (DEM) resolution and the SAR image-DEM coregistration step is also provided. The sensitivity analysis shows a significant robustness of the algorithm against most of the surface parameters, while the DEM resolution plays a key role in the despeckling process. Furthermore, the SB-SARBM3D algorithm outperforms the original SARBM3D in the presence of the most realistic scattering behaviors of the surface. An actual scenario is also presented to assess the DEM role in real-life conditions. PMID:27347971

  16. Analysis of patient movement during 3D USCT data acquisition

    Science.gov (United States)

    Ruiter, N. V.; Hopp, T.; Zapf, M.; Kretzek, E.; Gemmeke, H.

    2016-04-01

    In our first clinical study with a full 3D Ultrasound Computer Tomography (USCT) system patient data was acquired in eight minutes for one breast. In this paper the patient movement during the acquisition was analyzed quantitatively and as far as possible corrected in the resulting images. The movement was tracked in ten successive reflectivity reconstructions of full breast volumes acquired during 10 s intervals at different aperture positions, which were separated by 41 s intervals. The mean distance between initial and final position was 2.2 mm (standard deviation (STD) +/- 0.9 mm, max. 4.1 mm, min. 0.8 mm) and the average sum of all moved distances was 4.9 mm (STD +/- 1.9 mm, max. 8.8 mm, min. 2.7 mm). The tracked movement was corrected by summing successive images, which were transformed according to the detected movement. The contrast of these images increased and additional image content became visible.

  17. 3D numerical simulation and analysis of railgun gouging mechanism

    Directory of Open Access Journals (Sweden)

    Jin-guo Wu

    2016-04-01

    Full Text Available A gouging phenomenon with a hypervelocity sliding electrical contact in railgun not only shortens the rail lifetime but also affects the interior ballistic performance. In this paper, a 3-D numerical model was introduced to simulate and analyze the generation mechanism and evolution of the rail gouging phenomenon. The results show that a rail surface bulge is an important factor to induce gouging. High density and high pressure material flow on the contact surface, obliquely extruded into the rail when accelerating the armature to a high velocity, can produce gouging. Both controlling the bulge size to a certain range and selecting suitable materials for rail surface coating will suppress the formation of gouging. The numerical simulation had a good agreement with experiments, which validated the computing model and methodology are reliable.

  18. Assembly of a 3D Cellular Computer Using Folded E-Blocks

    Directory of Open Access Journals (Sweden)

    Shivendra Pandey

    2016-04-01

    Full Text Available The assembly of integrated circuits in three dimensions (3D provides a possible solution to address the ever-increasing demands of modern day electronic devices. It has been suggested that by using the third dimension, devices with high density, defect tolerance, short interconnects and small overall form factors could be created. However, apart from pseudo 3D architecture, such as monolithic integration, die, or wafer stacking, the creation of paradigms to integrate electronic low-complexity cellular building blocks in architecture that has tile space in all three dimensions has remained elusive. Here, we present software and hardware foundations for a truly 3D cellular computational devices that could be realized in practice. The computing architecture relies on the scalable, self-configurable and defect-tolerant cell matrix. The hardware is based on a scalable and manufacturable approach for 3D assembly using folded polyhedral electronic blocks (E-blocks. We created monomers, dimers and 2 × 2 × 2 assemblies of polyhedral E-blocks and verified the computational capabilities by implementing simple logic functions. We further show that 63.2% more compact 3D circuits can be obtained with our design automation tools compared to a 2D architecture. Our results provide a proof-of-concept for a scalable and manufacture-ready process for constructing massive-scale 3D computational devices.

  19. 3D Massive MIMO Systems: Modeling and Performance Analysis

    KAUST Repository

    Nadeem, Qurrat-Ul-Ain

    2015-07-30

    Multiple-input-multiple-output (MIMO) systems of current LTE releases are capable of adaptation in the azimuth only. Recently, the trend is to enhance system performance by exploiting the channel’s degrees of freedom in the elevation, which necessitates the characterization of 3D channels. We present an information-theoretic channel model for MIMO systems that supports the elevation dimension. The model is based on the principle of maximum entropy, which enables us to determine the distribution of the channel matrix consistent with the prior information on the angles. Based on this model, we provide analytical expression for the cumulative density function (CDF) of the mutual information (MI) for systems with a single receive and finite number of transmit antennas in the general signalto- interference-plus-noise-ratio (SINR) regime. The result is extended to systems with finite receive antennas in the low SINR regime. A Gaussian approximation to the asymptotic behavior of MI distribution is derived for the large number of transmit antennas and paths regime. We corroborate our analysis with simulations that study the performance gains realizable through meticulous selection of the transmit antenna downtilt angles, confirming the potential of elevation beamforming to enhance system performance. The results are directly applicable to the analysis of 5G 3D-Massive MIMO-systems.

  20. Computer-Designed Splints for Surgical Transfer of 3D Orthognathic Planning.

    Science.gov (United States)

    Zinser, Max; Zoeller, Joachim

    2015-10-01

    Advances in computers and imaging have permitted the adoption of three-dimensional (3D) planning protocols in orthognathic surgery, which may allow a paradigm shift when the computer-assisted planning can be transferred properly. The purpose of this investigation was to introduce an innovative clinical protocol using computer-aided designed and computer-aided manufactured (CAD/CAM) surgical splints for surgical transfer of 3D orthognathic planning compared with the classic technique using arbitrary occlusal splints. The clinical protocols consisted of computed tomography (CT) or cone-beam CT (CBCT) maxillofacial imaging, bone segmentation, 3D diagnosis, computer-assisted surgical treatment planning, and CAD/CAM surgical splints (group A) and manufacture of arbitrary occlusal splints (group B) for intraoperative surgical planning transfer. The observed patients underwent bimaxillary osteotomies and, if necessary, an additional genioplasty. Both techniques were evaluated by applying 13 hard tissue parameters to compare the 3D orthognathic planning (T0) with the postoperative result (T1) using 3D cephalometry. The CAD/CAM splints showed significant better precision for the maxilla (ΔT orthognathic planning, which is more precise compared with the conventional arbitrary occlusal splints.

  1. Soft computing approach to 3D lung nodule segmentation in CT.

    Science.gov (United States)

    Badura, P; Pietka, E

    2014-10-01

    This paper presents a novel, multilevel approach to the segmentation of various types of pulmonary nodules in computed tomography studies. It is based on two branches of computational intelligence: the fuzzy connectedness (FC) and the evolutionary computation. First, the image and auxiliary data are prepared for the 3D FC analysis during the first stage of an algorithm - the masks generation. Its main goal is to process some specific types of nodules connected to the pleura or vessels. It consists of some basic image processing operations as well as dedicated routines for the specific cases of nodules. The evolutionary computation is performed on the image and seed points in order to shorten the FC analysis and improve its accuracy. After the FC application, the remaining vessels are removed during the postprocessing stage. The method has been validated using the first dataset of studies acquired and described by the Lung Image Database Consortium (LIDC) and by its latest release - the LIDC-IDRI (Image Database Resource Initiative) database.

  2. DESIGN AND ANALYSIS OF 3D PRINTING PEN

    OpenAIRE

    Mr. Nayan Jyoti Gogoi *, Prof. T. Jeyapoovan

    2016-01-01

    In present time 3d models and prototypes helping lot of engineers and in many technical areas mainly in design field to design a real model as quickly as possible with the help of 3d printing technology. The demand for 3d printing applications are increasing day by day and it is reaching to a height of end no of applications. In this project I am going to discuss how we can make an affordable and user friendly 3d printing device which can be used as a 3d printing pen as well as a device which...

  3. 3D SPIRAL COMPUTED TOMOGRAPHY FOR THE DIAGNOSIS OF AN ABDOMINAL TUMOUR

    OpenAIRE

    R.C. Tiutiuca; Iuliana Eva

    2006-01-01

    Patients with digestive illnesses requires a full exploration, cases where imagistic assets support (echographic examination, radiological data, computed tomography, magnetic resonance) are very usefully. Computed tomography, in this process, has a special value. The results from axial images are sustained by the informations supplied from three-dimensional reconstruction processes (3D reconstruction) with relevant importance in establishment of diagnosis and therapeutic plan.

  4. 3D-SoftChip: A Novel Architecture for Next-Generation Adaptive Computing Systems

    Directory of Open Access Journals (Sweden)

    Lee Mike Myung-Ok

    2006-01-01

    Full Text Available This paper introduces a novel architecture for next-generation adaptive computing systems, which we term 3D-SoftChip. The 3D-SoftChip is a 3-dimensional (3D vertically integrated adaptive computing system combining state-of-the-art processing and 3D interconnection technology. It comprises the vertical integration of two chips (a configurable array processor and an intelligent configurable switch through an indium bump interconnection array (IBIA. The configurable array processor (CAP is an array of heterogeneous processing elements (PEs, while the intelligent configurable switch (ICS comprises a switch block, 32-bit dedicated RISC processor for control, on-chip program/data memory, data frame buffer, along with a direct memory access (DMA controller. This paper introduces the novel 3D-SoftChip architecture for real-time communication and multimedia signal processing as a next-generation computing system. The paper further describes the advanced HW/SW codesign and verification methodology, including high-level system modeling of the 3D-SoftChip using SystemC, being used to determine the optimum hardware specification in the early design stage.

  5. Comparative visual analysis of 3D urban wind simulations

    Science.gov (United States)

    Röber, Niklas; Salim, Mohamed; Grawe, David; Leitl, Bernd; Böttinger, Michael; Schlünzen, Heinke

    2016-04-01

    Climate simulations are conducted in large quantity for a variety of different applications. Many of these simulations focus on global developments and study the Earth's climate system using a coupled atmosphere ocean model. Other simulations are performed on much smaller regional scales, to study very small fine grained climatic effects. These microscale climate simulations pose similar, yet also different, challenges for the visualization and the analysis of the simulation data. Modern interactive visualization and data analysis techniques are very powerful tools to assist the researcher in answering and communicating complex research questions. This presentation discusses comparative visualization for several different wind simulations, which were created using the microscale climate model MITRAS. The simulations differ in wind direction and speed, but are all centered on the same simulation domain: An area of Hamburg-Wilhelmsburg that hosted the IGA/IBA exhibition in 2013. The experiments contain a scenario case to analyze the effects of single buildings, as well as examine the impact of the Coriolis force within the simulation. The scenario case is additionally compared with real measurements from a wind tunnel experiment to ascertain the accuracy of the simulation and the model itself. We also compare different approaches for tree modeling and evaluate the stability of the model. In this presentation, we describe not only our workflow to efficiently and effectively visualize microscale climate simulation data using common 3D visualization and data analysis techniques, but also discuss how to compare variations of a simulation and how to highlight the subtle differences in between them. For the visualizations we use a range of different 3D tools that feature techniques for statistical data analysis, data selection, as well as linking and brushing.

  6. 3D COMPUTER SIMULATION FOR LIGNIFICATION OF ANCIENT CHINESE TIMBER BUILDINGS

    Institute of Scientific and Technical Information of China (English)

    2001-01-01

    A pioneer research work was carried out by investigators engaged in surveying and mapping for describing ancient Chinese timber buildings by 3D frame graphs w ith a computer.Users can know the structural layers and the assembly process of the se buildings if the frame graphs are processed further with a computer model.Th is can be implemented by computer simulation technique.This technique display t he raw data on the screen of a computer and interactively manage them by combini ng technologies from computer graphics and image processing,multi-media technol ogy,artificial intelligence,highly parallel real-time computation technique an d human behavior science.This paper presents the implementing procedure of ligni fi cation simulation for large-sized wooden buildings as well as 3D dynamic assembl y of these buildings under the 3DS MAX environment.The results from computer sim ulation are also shown in the paper.

  7. Integration of 3D anatomical data obtained by CT imaging and 3D optical scanning for computer aided implant surgery

    Directory of Open Access Journals (Sweden)

    Paoli Alessandro

    2011-02-01

    Full Text Available Abstract Background A precise placement of dental implants is a crucial step to optimize both prosthetic aspects and functional constraints. In this context, the use of virtual guiding systems has been recognized as a fundamental tool to control the ideal implant position. In particular, complex periodontal surgeries can be performed using preoperative planning based on CT data. The critical point of the procedure relies on the lack of accuracy in transferring CT planning information to surgical field through custom-made stereo-lithographic surgical guides. Methods In this work, a novel methodology is proposed for monitoring loss of accuracy in transferring CT dental information into periodontal surgical field. The methodology is based on integrating 3D data of anatomical (impression and cast and preoperative (radiographic template models, obtained by both CT and optical scanning processes. Results A clinical case, relative to a fully edentulous jaw patient, has been used as test case to assess the accuracy of the various steps concurring in manufacturing surgical guides. In particular, a surgical guide has been designed to place implants in the bone structure of the patient. The analysis of the results has allowed the clinician to monitor all the errors, which have been occurring step by step manufacturing the physical templates. Conclusions The use of an optical scanner, which has a higher resolution and accuracy than CT scanning, has demonstrated to be a valid support to control the precision of the various physical models adopted and to point out possible error sources. A case study regarding a fully edentulous patient has confirmed the feasibility of the proposed methodology.

  8. Quantitative Analysis and Modeling of 3-D TSV-Based Power Delivery Architectures

    Science.gov (United States)

    He, Huanyu

    As 3-D technology enters the commercial production stage, it is critical to understand different 3-D power delivery architectures on the stacked ICs and packages with through-silicon vias (TSVs). Appropriate design, modeling, analysis, and optimization approaches of the 3-D power delivery system are of foremost significance and great practical interest to the semiconductor industry in general. Based on fundamental physics of 3-D integration components, the objective of this thesis work is to quantitatively analyze the power delivery for 3D-IC systems, develop appropriate physics-based models and simulation approaches, understand the key issues, and provide potential solutions for design of 3D-IC power delivery architectures. In this work, a hybrid simulation approach is adopted as the major approach along with analytical method to examine 3-D power networks. Combining electromagnetic (EM) tools and circuit simulators, the hybrid approach is able to analyze and model micrometer-scale components as well as centimeter-scale power delivery system with high accuracy and efficiency. The parasitic elements of the components on the power delivery can be precisely modeled by full-wave EM solvers. Stack-up circuit models for the 3-D power delivery networks (PDNs) are constructed through a partition and assembly method. With the efficiency advantage of the SPICE circuit simulation, the overall 3-D system power performance can be analyzed and the 3-D power delivery architectures can be evaluated in a short computing time. The major power delivery issues are the voltage drop (IR drop) and voltage noise. With a baseline of 3-D power delivery architecture, the on-chip PDNs of TSV-based chip stacks are modeled and analyzed for the IR drop and AC noise. The basic design factors are evaluated using the hybrid approach, such as the number of stacked chips, the number of TSVs, and the TSV arrangement. Analytical formulas are also developed to evaluate the IR drop in 3-D chip stack in

  9. 3-D reconstruction of an ancient Egyptian mummy using X-ray computer tomography.

    Science.gov (United States)

    Baldock, C; Hughes, S W; Whittaker, D K; Taylor, J; Davis, R; Spencer, A J; Tonge, K; Sofat, A

    1994-12-01

    Computer tomography has been used to image and reconstruct in 3-D an Egyptian mummy from the collection of the British Museum. This study of Tjentmutengebtiu, a priestess from the 22nd dynasty (945-715 BC) revealed invaluable information of a scientific, Egyptological and palaeopathological nature without mutilation and destruction of the painted cartonnage case or linen wrappings. Precise details on the removal of the brain through the nasal cavity and the viscera from the abdominal cavity were obtained. The nature and composition of the false eyes were investigated. The detailed analysis of the teeth provided a much closer approximation of age at death. The identification of materials used for the various amulets including that of the figures placed in the viscera was graphically demonstrated using this technique.

  10. 3D FEA Computation of the CLIC Machine Detector Interface Magnets

    CERN Document Server

    Bartalesi, A

    2012-01-01

    A critical aspect of the Compact Linear Collider (CLIC) design is represented by the Accelerator/Experiment interface (called Machine Detector Interface or MDI). In the 3 TeV CLIC layout, the final focus QD0 quadrupole will be located inside the end-cap of the detector itself. This complex MDI scenario required to be simulated with a full 3D-FE analysis. This study was critical to check and control the magnetic cross-talk between the detector solenoid and the final focus magnet and therefore to optimize the design of an “antisolenoids” system needed to shield the QD0 and the e-/e+ beams from the detector magnetic field. In this paper the development and evolution of the computational FE model is presented together with the results obtained and their implication on the CLIC MDI design.

  11. Computer-aided microtomography with true 3-D display in electron microscopy.

    Science.gov (United States)

    Nelson, A C

    1986-01-01

    A novel research system has been designed to permit three-dimensional (3-D) viewing of high resolution image data from transmission electron microscopy (TEM) and scanning electron microscopy (SEM). The system consists of front-end primary data acquisition devices, such as TEM and SEM machines, which are equipped with computer-controlled specimen tilt stages. The output from these machines is in analogue form, where a video camera attached to the TEM provides the sequential analogue image output while the SEM direct video output is utilized. A 10 MHz digitizer transforms the video image to a digital array of 512 X 512 pixel units of 8 bits deep-stored in a frame buffer. Digital images from multiple projections are reconstructed into 3-D image boxes in a dedicated computer. Attached to the computer is a powerful true 3-D display device which has hardware for graphic manipulations including tilt and rotate on any axis and for probing the image with a 3-D cursor. Data editing and automatic contouring functions are used to enhance areas of interest, and specialized software is available for measurement of numbers, distances, areas, and volumes. With proper archiving of reconstructed image sequences, a dynamic 3-D presentation is possible. The microtomography system is highly versatile and can process image data on-line or from remote sites from which data records would typically be transported on computer tape, video tape, or floppy disk. PMID:3753610

  12. Dynamic Characteristic Analysis of Linear DC Motor by 3D EMCN Considering Input Voltage

    Energy Technology Data Exchange (ETDEWEB)

    Ha, Kyung Ho; Yeom, Sang Bu [Changwon National University, Changwon(Korea); Hong, JUNG Pyo; Hur Jin; Kang Do Hyunc [Hanyang University(Seoul Campus), Seoul(Korea)

    2002-02-01

    In order to design the Linear DC Motor (LDM) With improved characteristics, transient and steady state analysis are required. Furthermore, 3D analysis is also needed to analyze the precise characteristics like thrust, time harmonics. This paper deals with the transient and dynamic characteristic analysis if LDM by coupling of external circuit and motion equation using 3D Equivalent Magnetic Circuit Network Method (EMCN). For the three dimensional analysis of electric machine, EMCN is very effective method that ensures high accuracy similar to FEM and short computation time. Also, The modeling by EMCN easily allows the mover to move with respect to the Sartre at each time Also, and the spatial moving step is determined by the solution of the mechanical motion equation and the computed electromagnetic thrust. The results are compared with experimental ones to clarify the usefulness and verify the accuracy of the proposed method. (author). 11 refs., 20 figs., 2 tabs.

  13. Enhancement of 3D modeling and classification of microcalcifications in breast computed tomography (BCT)

    Science.gov (United States)

    Alquran, Hiam; Shaheen, Eman; O'Connor, J. Michael; Mahd, Mufeed

    2014-03-01

    Current computer aided diagnosis (CADx) software for digital mammography relies mainly on 2D techniques. With the emergence of three-dimensional (3D) breast imaging modalities such as breast Computed Tomography (BCT), there is an opportunity to analyze 3D features in the classification of calcifications. We previously reported our initial work on automated 3D feature detection and classification based on morphological descriptions for single microcalcifications within clusters [1]. In this work, we propose the expansion of the 3D classification methods to include novel microcalcification morphological feature detection such as including more morphological classes and replacing the 2D Radon transform by a 3D Radon transform. Results show that the classification rate improved compared to the previously reported results from a total of 546 to 559 consistently classified calcifications out of 635 total calcifications. This slight improvement is due to the use of the 3D Radon transform and incorporating methods to detect two classes not previously implemented. Future work will focus on adding feature detection and classification of cluster patterns.

  14. Meta!Blast computer game: a pipeline from science to 3D art to education

    Science.gov (United States)

    Schneller, William; Campbell, P. J.; Bassham, Diane; Wurtele, Eve Syrkin

    2012-03-01

    Meta!Blast (http://www.metablast.org) is designed to address the challenges students often encounter in understanding cell and metabolic biology. Developed by faculty and students in biology, biochemistry, computer science, game design, pedagogy, art and story, Meta!Blast is being created using Maya (http://usa.autodesk.com/maya/) and the Unity 3D (http://unity3d.com/) game engine, for Macs and PCs in classrooms; it has also been exhibited in an immersive environment. Here, we describe the pipeline from protein structural data and holographic information to art to the threedimensional (3D) environment to the game engine, by which we provide a publicly-available interactive 3D cellular world that mimics a photosynthetic plant cell.

  15. Efficient computation of steady, 3D water-wave patterns, application to hovercraft-type flows

    OpenAIRE

    Lewis, M. R.; Koren, Barry

    2002-01-01

    Numerical methods for the computation of stationary free surfaces is the subject of much current research in computational engineering. The present report is directed towards free surfaces in maritime engineering. Of interest here are the long steady waves generated by hovercraft and ships, the gravity waves. In the present report an existing 2D iterative method for the computation of stationary gravity-wave solutions is extended to 3D, numerically investigated, and improved. The method emplo...

  16. A 3-D Computational Study of a Variable Camber Continuous Trailing Edge Flap (VCCTEF) Spanwise Segment

    Science.gov (United States)

    Kaul, Upender K.; Nguyen, Nhan T.

    2015-01-01

    Results of a computational study carried out to explore the effects of various elastomer configurations joining spanwise contiguous Variable Camber Continuous Trailing Edge Flap (VCCTEF) segments are reported here. This research is carried out as a proof-of-concept study that will seek to push the flight envelope in cruise with drag optimization as the objective. The cruise conditions can be well off design such as caused by environmental conditions, maneuvering, etc. To handle these off-design conditions, flap deflection is used so when the flap is deflected in a given direction, the aircraft angle of attack changes accordingly to maintain a given lift. The angle of attack is also a design parameter along with the flap deflection. In a previous 2D study,1 the effect of camber was investigated and the results revealed some insight into the relative merit of various camber settings of the VCCTEF. The present state of the art has not advanced sufficiently to do a full 3-D viscous analysis of the whole NASA Generic Transport Model (GTM) wing with VCCTEF deployed with elastomers. Therefore, this study seeks to explore the local effects of three contiguous flap segments on lift and drag of a model devised here to determine possible trades among various flap deflections to achieve desired lift and drag results. Although this approach is an approximation, it provides new insights into the "local" effects of the relative deflections of the contiguous spanwise flap systems and various elastomer segment configurations. The present study is a natural extension of the 2-D study to assess these local 3-D effects. Design cruise condition at 36,000 feet at free stream Mach number of 0.797 and a mean aerodynamic chord (MAC) based Reynolds number of 30.734x10(exp 6) is simulated for an angle of attack (AoA) range of 0 to 6 deg. In the previous 2-D study, the calculations revealed that the parabolic arc camber (1x2x3) and circular arc camber (VCCTEF222) offered the best L

  17. Binary pattern analysis for 3D facial action unit detection

    NARCIS (Netherlands)

    Sandbach, Georgia; Zafeiriou, Stefanos; Pantic, Maja

    2012-01-01

    In this paper we propose new binary pattern features for use in the problem of 3D facial action unit (AU) detection. Two representations of 3D facial geometries are employed, the depth map and the Azimuthal Projection Distance Image (APDI). To these the traditional Local Binary Pattern is applied, a

  18. Computer-Assisted Hepatocellular Carcinoma Ablation Planning Based on 3-D Ultrasound Imaging.

    Science.gov (United States)

    Li, Kai; Su, Zhongzhen; Xu, Erjiao; Guan, Peishan; Li, Liu-Jun; Zheng, Rongqin

    2016-08-01

    To evaluate computer-assisted hepatocellular carcinoma (HCC) ablation planning based on 3-D ultrasound, 3-D ultrasound images of 60 HCC lesions from 58 patients were obtained and transferred to a research toolkit. Compared with virtual manual ablation planning (MAP), virtual computer-assisted ablation planning (CAP) consumed less time and needle insertion numbers and exhibited a higher rate of complete tumor coverage and lower rate of critical structure injury. In MAP, junior operators used less time, but had more critical structure injury than senior operators. For large lesions, CAP performed better than MAP. For lesions near critical structures, CAP resulted in better outcomes than MAP. Compared with MAP, CAP based on 3-D ultrasound imaging was more effective and achieved a higher rate of complete tumor coverage and a lower rate of critical structure injury; it is especially useful for junior operators and with large lesions, and lesions near critical structures. PMID:27126243

  19. A Review of Failure Analysis Methods for Advanced 3D Microelectronic Packages

    Science.gov (United States)

    Li, Yan; Srinath, Purushotham Kaushik Muthur; Goyal, Deepak

    2016-01-01

    Advanced three dimensional (3D) packaging is a key enabler in driving form factor reduction, performance benefits, and package cost reduction, especially in the fast paced mobility and ultraportable consumer electronics segments. The high level of functional integration and the complex package architecture pose a significant challenge for conventional fault isolation (FI) and failure analysis (FA) methods. Innovative FI/FA tools and techniques are required to tackle the technical and throughput challenges. In this paper, the applications of FI and FA techniques such as Electro Optic Terahertz Pulse Reflectometry, 3D x-ray computed tomography, lock-in thermography, and novel physical sample preparation methods to 3D packages with package on package and stacked die with through silicon via configurations are reviewed, along with the key FI and FA challenges.

  20. 3D city models for CAAD-supported analysis and design of urban areas

    Science.gov (United States)

    Sinning-Meister, M.; Gruen, A.; Dan, H.

    A joint research project was conducted at ETH Zurich to develop a user-friendly software environment for the representation, visual manipulation, analysis and design of urban areas. Three groups were involved in the project: (1) the 'Architecture and Planning' group defined the requirements and expectations for the system; (2) the 'Photogrammetry' group acquired and processed raster and 3D vector data to form a 3D model of the urban area; and (3) the 'CAAD' (Computer Aided Architectural Design) group embedded the data into AutoCAD and implemented database functionality. Results of the photogrammetry group are presented, including the implementation of a 'topology builder' which automatically fits roof planes to manually or semi-automatically measured roof points in order to create AutoCAD-compatible 3D building models. Digital orthoimages and derived products such as perspective views, and the geometric correction of house roofs in digital orthoimages also were generated for test sites in Switzerland.

  1. Novel fully integrated computer system for custom footwear: from 3D digitization to manufacturing

    Science.gov (United States)

    Houle, Pascal-Simon; Beaulieu, Eric; Liu, Zhaoheng

    1998-03-01

    This paper presents a recently developed custom footwear system, which integrates 3D digitization technology, range image fusion techniques, a 3D graphical environment for corrective actions, parametric curved surface representation and computer numerical control (CNC) machining. In this system, a support designed with the help of biomechanics experts can stabilize the foot in a correct and neutral position. The foot surface is then captured by a 3D camera using active ranging techniques. A software using a library of documented foot pathologies suggests corrective actions on the orthosis. Three kinds of deformations can be achieved. The first method uses previously scanned pad surfaces by our 3D scanner, which can be easily mapped onto the foot surface to locally modify the surface shape. The second kind of deformation is construction of B-Spline surfaces by manipulating control points and modifying knot vectors in a 3D graphical environment to build desired deformation. The last one is a manual electronic 3D pen, which may be of different shapes and sizes, and has an adjustable 'pressure' information. All applied deformations should respect a G1 surface continuity, which ensure that the surface can accustom a foot. Once the surface modification process is completed, the resulting data is sent to manufacturing software for CNC machining.

  2. Analysis of User Requirements in Interactive 3D Video Systems

    Directory of Open Access Journals (Sweden)

    Haiyue Yuan

    2012-01-01

    Full Text Available The recent development of three dimensional (3D display technologies has resulted in a proliferation of 3D video production and broadcasting, attracting a lot of research into capture, compression and delivery of stereoscopic content. However, the predominant design practice of interactions with 3D video content has failed to address its differences and possibilities in comparison to the existing 2D video interactions. This paper presents a study of user requirements related to interaction with the stereoscopic 3D video. The study suggests that the change of view, zoom in/out, dynamic video browsing, and textual information are the most relevant interactions with stereoscopic 3D video. In addition, we identified a strong demand for object selection that resulted in a follow-up study of user preferences in 3D selection using virtual-hand and ray-casting metaphors. These results indicate that interaction modality affects users’ decision of object selection in terms of chosen location in 3D, while user attitudes do not have significant impact. Furthermore, the ray-casting-based interaction modality using Wiimote can outperform the volume-based interaction modality using mouse and keyboard for object positioning accuracy.

  3. Practical limitations of cone-beam computed tomography in 3D cephalometry

    NARCIS (Netherlands)

    Damstra, Janalt; Fourie, Zacharias; Ren, Yijin

    2011-01-01

    3D cone beam computed tomography (CBCT) images offer a unique and new appreciation of the anatomical structures and underlying anomalies not possible with conventional radiographs. However, in almost all aspects of CBCT imaging, from utilization to application, inherent limitations and pitfalls exis

  4. The Effects of 3D Computer Simulation on Biology Students' Achievement and Memory Retention

    Science.gov (United States)

    Elangovan, Tavasuria; Ismail, Zurida

    2014-01-01

    A quasi experimental study was conducted for six weeks to determine the effectiveness of two different 3D computer simulation based teaching methods, that is, realistic simulation and non-realistic simulation on Form Four Biology students' achievement and memory retention in Perak, Malaysia. A sample of 136 Form Four Biology students in Perak,…

  5. Computer assisted determination of acetabular cup orientation using 2D-3D image registration

    Energy Technology Data Exchange (ETDEWEB)

    Zheng, Guoyan; Zhang, Xuan [University of Bern, Institute for Surgical Technology and Biomechanics, Bern (Switzerland)

    2010-09-15

    2D-3D image-based registration methods have been developed to measure acetabular cup orientation after total hip arthroplasty (THA). These methods require registration of both the prosthesis and the CT images to 2D radiographs and compute implant position with respect to a reference. The application of these methods is limited in clinical practice due to two limitations: (1) the requirement of a computer-aided design (CAD) model of the prosthesis, which may be unavailable due to the proprietary concerns of the manufacturer, and (2) the requirement of either multiple radiographs or radiograph-specific calibration, usually unavailable for retrospective studies. In this paper, we propose a new method to address these limitations. A new formulation for determination of post-operative cup orientation, which couples a radiographic measurement with 2D-3D image matching, was developed. In our formulation, the radiographic measurement can be obtained with known methods so that the challenge lies in the 2D-3D image matching. To solve this problem, a hybrid 2D-3D registration scheme combining a landmark-to-ray 2D-3D alignment with a robust intensity-based 2D-3D registration was used. The hybrid 2D-3D registration scheme allows computing both the post-operative cup orientation with respect to an anatomical reference and the pelvic tilt and rotation with respect to the X-ray imaging table/plate. The method was validated using 2D adult cadaver hips. Using the hybrid 2D-3D registration scheme, our method showed a mean accuracy of 1.0 {+-} 0.7 (range from 0.1 to 2.0 ) for inclination and 1.7 {+-} 1.2 (range from 0.0 to 3.9 ) for anteversion, taking the measurements from post-operative CT images as ground truths. Our new solution formulation and the hybrid 2D-3D registration scheme facilitate estimation of post-operative cup orientation and measurement of pelvic tilt and rotation. (orig.)

  6. Shape analysis of local facial patches for 3D facial expression recognition

    OpenAIRE

    Maalej, Ahmed; Ben Amor, Boulbaba; Daoudi, Mohamed; Srivastava, Anuj; Berretti, Stefano

    2011-01-01

    International audience; In this paper we address the problem of 3D facial expression recognition. We propose a local geometric shape analysis of facial surfaces coupled with machine learning techniques for expression classification. A computation of the length of the geodesic path between corresponding patches, using a Riemannian framework, in a shape space provides a quantitative information about their similarities. These measures are then used as inputs to several classification methods. T...

  7. Analysis of Alignment Influence on 3-D Anthropometric Statistics

    Institute of Scientific and Technical Information of China (English)

    CAI Xiuwen; LI Zhizhong; CHANG Chien-Chi; DEMPSEY Patrick

    2005-01-01

    Three-dimensional (3-D) surface anthropometry can provide much more useful information for many applications such as ergonomic product design than traditional individual body dimension measurements. However, the traditional definition of the percentile calculation is designed only for 1-D anthropometric data estimates. The same approach cannot be applied directly to 3-D anthropometric statistics otherwise it could lead to misinterpretations. In this paper, the influence of alignment references on 3-D anthropometric statistics is analyzed mathematically, which shows that different alignment reference points (for example, landmarks) for translation alignment could result in different object shapes if 3-D anthropometric data are processed for percentile values based on coordinates and that dimension percentile calculations based on coordinate statistics are incompatible with those traditionally based on individual dimensions.

  8. Quantitative analysis of autophagy using advanced 3D fluorescence microscopy.

    Science.gov (United States)

    Changou, Chun A; Wolfson, Deanna L; Ahluwalia, Balpreet Singh; Bold, Richard J; Kung, Hsing-Jien; Chuang, Frank Y S

    2013-05-03

    Prostate cancer is the leading form of malignancies among men in the U.S. While surgery carries a significant risk of impotence and incontinence, traditional chemotherapeutic approaches have been largely unsuccessful. Hormone therapy is effective at early stage, but often fails with the eventual development of hormone-refractory tumors. We have been interested in developing therapeutics targeting specific metabolic deficiency of tumor cells. We recently showed that prostate tumor cells specifically lack an enzyme (argininosuccinate synthase, or ASS) involved in the synthesis of the amino acid arginine(1). This condition causes the tumor cells to become dependent on exogenous arginine, and they undergo metabolic stress when free arginine is depleted by arginine deiminase (ADI)(1,10). Indeed, we have shown that human prostate cancer cells CWR22Rv1 are effectively killed by ADI with caspase-independent apoptosis and aggressive autophagy (or macroautophagy)(1,2,3). Autophagy is an evolutionarily-conserved process that allows cells to metabolize unwanted proteins by lysosomal breakdown during nutritional starvation(4,5). Although the essential components of this pathway are well-characterized(6,7,8,9), many aspects of the molecular mechanism are still unclear - in particular, what is the role of autophagy in the death-response of prostate cancer cells after ADI treatment? In order to address this question, we required an experimental method to measure the level and extent of autophagic response in cells - and since there are no known molecular markers that can accurately track this process, we chose to develop an imaging-based approach, using quantitative 3D fluorescence microscopy(11,12). Using CWR22Rv1 cells specifically-labeled with fluorescent probes for autophagosomes and lysosomes, we show that 3D image stacks acquired with either widefield deconvolution microscopy (and later, with super-resolution, structured-illumination microscopy) can clearly capture the early

  9. 3D image analysis of a volcanic deposit

    Science.gov (United States)

    de Witte, Y.; Vlassenbroeck, J.; Vandeputte, K.; Dewanckele, J.; Cnudde, V.; van Hoorebeke, L.; Ernst, G.; Jacobs, P.

    2009-04-01

    During the last decades, X-ray micro CT has become a well established technique for non-destructive testing in a wide variety of research fields. Using a series of X-ray transmission images of the sample at different projection angles, a stack of 2D cross-sections is reconstructed, resulting in a 3D volume representing the X-ray attenuation coefficients of the sample. Since the attenuation coefficient of a material depends on its density and atomic number, this volume provides valuable information about the internal structure and composition of the sample. Although much qualitative information can be derived directly from this 3D volume, researchers usually require more quantitative results to be able to provide a full characterization of the sample under investigation. This type of information needs to be retrieved using specialized image processing software. For most samples, it is imperative that this processing is performed on the 3D volume as a whole, since a sequence of 2D cross sections usually forms an inadequate approximation of the actual structure. The complete processing of a volume consists of three sequential steps. First, the volume is segmented into a set of objects. What these objects represent depends on what property of the sample needs to be analysed. The objects can be for instance concavities, dense inclusions or the matrix of the sample. When dealing with noisy data, it might be necessary to filter the data before applying the segmentation. The second step is the separation of connected objects into a set of smaller objects. This is necessary when objects appear to be connected because of the limited resolution and contrast of the scan. Separation can also be useful when the sample contains a network structure and one wants to study the individual cells of the network. The third and last step consists of the actual analysis of the various objects to derive the different parameters of interest. While some parameters require extensive

  10. 3-D Printed Ultem 9085 Testing and Analysis

    Science.gov (United States)

    Aguilar, Daniel; Christensen, Sean; Fox, Emmet J.

    2015-01-01

    The purpose of this document is to analyze the mechanical properties of 3-D printed Ultem 9085. This document will focus on the capabilities, limitations, and complexities of 3D printing in general, and explain the methods by which this material is tested. Because 3-D printing is a relatively new process that offers an innovative means to produce hardware, it is important that the aerospace community understands its current advantages and limitations, so that future endeavors involving 3-D printing may be completely safe. This document encompasses three main sections: a Slosh damage assessment, a destructive test of 3-D printed Ultem 9085 samples, and a test to verify simulation for the 3-D printed SDP (SPHERES Docking Port). Described below, 'Slosh' and 'SDP' refer to two experiments that are built using Ultem 9085 for use with the SPHERES (Synchronized Position Hold, Engage, Reorient, Experimental Satellites) program onboard the International Space Station (ISS) [16]. The SPHERES Facility is managed out of the National Aeronautics and Space Administration (NASA) Ames Research Center in California.

  11. 3D intrathoracic region definition and its application to PET-CT analysis

    Science.gov (United States)

    Cheirsilp, Ronnarit; Bascom, Rebecca; Allen, Thomas W.; Higgins, William E.

    2014-03-01

    Recently developed integrated PET-CT scanners give co-registered multimodal data sets that offer complementary three-dimensional (3D) digital images of the chest. PET (positron emission tomography) imaging gives highly specific functional information of suspect cancer sites, while CT (X-ray computed tomography) gives associated anatomical detail. Because the 3D CT and PET scans generally span the body from the eyes to the knees, accurate definition of the intrathoracic region is vital for focusing attention to the central-chest region. In this way, diagnostically important regions of interest (ROIs), such as central-chest lymph nodes and cancer nodules, can be more efficiently isolated. We propose a method for automatic segmentation of the intrathoracic region from a given co-registered 3D PET-CT study. Using the 3D CT scan as input, the method begins by finding an initial intrathoracic region boundary for a given 2D CT section. Next, active contour analysis, driven by a cost function depending on local image gradient, gradient-direction, and contour shape features, iteratively estimates the contours spanning the intrathoracic region on neighboring 2D CT sections. This process continues until the complete region is defined. We next present an interactive system that employs the segmentation method for focused 3D PET-CT chest image analysis. A validation study over a series of PET-CT studies reveals that the segmentation method gives a Dice index accuracy of less than 98%. In addition, further results demonstrate the utility of the method for focused 3D PET-CT chest image analysis, ROI definition, and visualization.

  12. Histomorphometric quantification of human pathological bones from synchrotron radiation 3D computed microtomography

    International Nuclear Information System (INIS)

    Conventional bone histomorphometry is an important method for quantitative evaluation of bone microstructure. X-ray computed microtomography is a noninvasive technique, which can be used to evaluate histomorphometric indices in trabecular bones (BV/TV, BS/BV, Tb.N, Tb.Th, Tb.Sp). In this technique, the output 3D images are used to quantify the whole sample, differently from the conventional one, in which the quantification is performed in 2D slices and extrapolated for 3D case. In this work, histomorphometric quantification using synchrotron 3D X-ray computed microtomography was performed to quantify pathological samples of human bone. Samples of human bones were cut into small blocks (8 mm x 8 mm x 10 mm) with a precision saw and then imaged. The computed microtomographies were obtained at SYRMEP (Synchrotron Radiation for MEdical Physics) beamline, at ELETTRA synchrotron radiation facility (Italy). The obtained 3D images yielded excellent resolution and details of intra-trabecular bone structures, including marrow present inside trabeculae. Histomorphometric quantification was compared to literature as well. (author)

  13. Using the CAVE virtual-reality environment as an aid to 3-D electromagnetic field computation

    International Nuclear Information System (INIS)

    One of the major problems in three-dimensional (3-D) field computation is visualizing the resulting 3-D field distributions. A virtual-reality environment, such as the CAVE, (CAVE Automatic Virtual Environment) is helping to overcome this problem, thus making the results of computation more usable for designers and users of magnets and other electromagnetic devices. As a demonstration of the capabilities of the CAVE, the elliptical multipole wiggler (EMW), an insertion device being designed for the Advanced Photon Source (APS) now being commissioned at Argonne National Laboratory (ANL), wa made visible, along with its fields and beam orbits. Other uses of the CAVE in preprocessing and postprocessing computation for electromagnetic applications are also discussed

  14. Towards true 3D textural analysis; using your crystal mush wisely.

    Science.gov (United States)

    Jerram, D. A.; Morgan, D. J.; Pankhurst, M. J.

    2014-12-01

    The crystal cargo that is found in volcanic and plutonic rocks contains a wealth of information about magmatic mush processes, crystallisation history, crystal entrainment and recycling. Phenocryst populations predominantly record episodes of growth/nucleation and bulk geochemical changes within an evolving crystal-melt body. Ante- and xeno-crysts provide useful clues to the nature of mush interaction with wall rock and with principal magma(s). Furthermore, crystal evolutions (core to rim) record pathways through pressure, temperature and compositional space. These can often illustrate complex recycling within systems, describing the plumbing architecture. Understanding this architecture underpins our knowledge of how igneous systems can interact with the crust, grow, freeze, re-mobilise and prime for eruption. Initially, 2D studies produced corrected 3D crystal size distributions to help provide information about nucleation and residence times. It immediately became clear that crystal shape is an important factor in determining the confidence placed upon 3D reconstructions of 2D data. Additionally studies utilised serial sections of medium- to coarse-grain-size populations which allowed 3D reconstruction using modelling software to be improved, since size and shape etc. can be directly constrained. Finally the advent of textural studies using X-ray tomography has revolutionised the way in which we can inspect the crystal cargo in mushy systems, allowing us to image in great detail crystal packing arrangements, 3D CSDs, shapes and orientations etc. The latest most innovative studies use X-ray micro-computed tomography to rapidly characterise chemical populations within the crystal cargo, adding a further dimension to this approach, and implies the ability to untangle magmatic chemical components to better understand their individual and combined evolution. In this contribution key examples of the different types of textural analysis techniques in 2D and 3D

  15. Digital holography microscopy in 3D biologic samples analysis

    International Nuclear Information System (INIS)

    In this work it is used a setup for Digital Holography Microscopy (MHD) for 3D biologic samples reconstruction. The phase contrast image reconstruction is done by using the Double propagation Method. The system was calibrated and tested by using a micrometric scale and pure phase object respectively. It was simulated the human red blood cell (erythrocyte) and beginning from the simulated hologram the digital 3D phase image for erythrocytes it was calculated. Also there was obtained experimental holograms of human erythrocytes and its corresponding 3D phase images, being evident the correspondence qualitative and quantitative between these characteristics in the simulated erythrocyte and in the experimentally calculated by DHM in both cases.

  16. Digital holography microscopy in 3D biologic samples analysis

    Energy Technology Data Exchange (ETDEWEB)

    Ricardo, J O; Palacios, F; Palacios, G F; Sanchez, A [Department of Physics, University of Oriente (Cuba); Muramatsu, M [Department of General Physics, University of Sao Paulo - Sao Paulo (Brazil); Gesualdi, M [Engineering center, Models and Applied Social Science, UFABC - Sao Paulo (Brazil); Font, O [Department of Bio-ingeniering, University of Oriente - Santiago de Cuba (Cuba); Valin, J L [Mechanics Department, ISPJAE, Habana (Cuba); Escobedo, M; Herold, S [Department of Computation, University of Oriente (Cuba); Palacios, D F, E-mail: frpalaciosf@gmail.com [Department of Nuclear physics, University of Simon BolIva (Venezuela, Bolivarian Republic of)

    2011-01-01

    In this work it is used a setup for Digital Holography Microscopy (MHD) for 3D biologic samples reconstruction. The phase contrast image reconstruction is done by using the Double propagation Method. The system was calibrated and tested by using a micrometric scale and pure phase object respectively. It was simulated the human red blood cell (erythrocyte) and beginning from the simulated hologram the digital 3D phase image for erythrocytes it was calculated. Also there was obtained experimental holograms of human erythrocytes and its corresponding 3D phase images, being evident the correspondence qualitative and quantitative between these characteristics in the simulated erythrocyte and in the experimentally calculated by DHM in both cases.

  17. 3D statistical failure analysis of monolithic dental ceramic crowns.

    Science.gov (United States)

    Nasrin, Sadia; Katsube, Noriko; Seghi, Robert R; Rokhlin, Stanislav I

    2016-07-01

    For adhesively retained ceramic crown of various types, it has been clinically observed that the most catastrophic failures initiate from the cement interface as a result of radial crack formation as opposed to Hertzian contact stresses originating on the occlusal surface. In this work, a 3D failure prognosis model is developed for interface initiated failures of monolithic ceramic crowns. The surface flaw distribution parameters determined by biaxial flexural tests on ceramic plates and point-to-point variations of multi-axial stress state at the intaglio surface are obtained by finite element stress analysis. They are combined on the basis of fracture mechanics based statistical failure probability model to predict failure probability of a monolithic crown subjected to single-cycle indentation load. The proposed method is verified by prior 2D axisymmetric model and experimental data. Under conditions where the crowns are completely bonded to the tooth substrate, both high flexural stress and high interfacial shear stress are shown to occur in the wall region where the crown thickness is relatively thin while high interfacial normal tensile stress distribution is observed at the margin region. Significant impact of reduced cement modulus on these stress states is shown. While the analyses are limited to single-cycle load-to-failure tests, high interfacial normal tensile stress or high interfacial shear stress may contribute to degradation of the cement bond between ceramic and dentin. In addition, the crown failure probability is shown to be controlled by high flexural stress concentrations over a small area, and the proposed method might be of some value to detect initial crown design errors. PMID:27215334

  18. Scanning transmission and computer-aided volumic electron microscopy: 3-D modeling of entire cells by electronic imaging

    Science.gov (United States)

    Bron, Christophe; Gremillet, Philip; Launay, D.; Jourlin, Michel; Gautschi, H. P.; Baechi, Thomas; Schuepbach, Joerg

    1990-05-01

    The digital processing of electron microscopic images from serial sections containing laser-induced topographical references allows a 3-D reconstruction at a depth resolution of 30 to 40 nm of entire cells by the use of image analysis methods, as already demonstrated for Transmission Electron Microscopy (TEM) coupled with a video camera. We decided to use a Scanning Transmission Electron Microscope (STEM) to get higher contrast and better resolution at medium magnification. The scanning of our specimens at video frequencies is an attractive and easy way to link a STEM with an image processing system but the hysteresis of the electronic spools responsible for the magnetic deviation of the scanning electron beam induces deformations of images which have to be modelized and corrected before registration. Computer algorithms developed for image analysis and treatment correct the artifacts caused by the use of STEM and by serial sectioning to automatically reconstruct the third dimension of the cells. They permit the normalization of the images through logarithmic processing of the original grey level infonnation. The automatic extraction of cell limits allows to link the image analysis and treatments with image synthesis methods by minimal human intervention. The surface representation and the registered images provide an ultrastructural data base from which quantitative 3-D morphological parameters, as well as otherwise impossible visualizations, can be computed. This 3-D image processing named C.A.V.U.M. for Computer Aided Volumic Ultra-Microscopy offers a new tool for the documentation and analysis of cell ultrastructure and for 3-D morphometric studies at EM magnifications. Further, a virtual observer can be computed in such a way as to simulate a visit of the reconstructed object.

  19. Analysis of quality of experience in 3D video systems

    OpenAIRE

    Gutiérrez Sánchez, Jesús

    2016-01-01

    Esta tesis presenta un estudio exhaustivo sobre la evaluación de la calidad de experiencia (QoE, del inglés Quality of Experience) percibida por los usuarios de sistemas de vídeo 3D, analizando el impacto de los efectos introducidos por todos los elementos de la cadena de procesamiento de vídeo 3D. Por lo tanto, se presentan varias pruebas de evaluación subjetiva específicamente diseñadas para evaluar los sistemas considerados, teniendo en cuenta todos los factores perceptuales relacionados c...

  20. A 3-D aerodynamic method for the analysis of isolated horizontal-axis wind turbines

    Energy Technology Data Exchange (ETDEWEB)

    Ammara, I.; Masson, C.; Paraschivoiu, I. [Ecole Polytechnique, Montreal (Canada)

    1997-12-31

    In most existing performance-analysis methods, wind turbines are considered isolated so that interference effects caused by other rotors or by the site topography are neglected. The main objective of this paper is to propose a practical 3-D method suitable for the study of these effects, in order to optimize the arrangement and the positioning of Horizontal-Axis Wind Turbines (HAWTs) in a wind farm. In the proposed methodology, the flow field around isolated HAWTs is predicted by solving the 3-D, time-averaged, steady-state, incompressible, Navier-Stokes equations in which the turbines are represented by distributions of momentum sources. The resulting governing equations are solved using a Control-Volume Finite Element Method (CVFEM). The fundamental aspects related to the development of a practical 3-D method are discussed in this paper, with an emphasis on some of the challenges that arose during its implementation. The current implementation is limited to the analysis of isolated HAWTs. Preliminary results have indicated that, the proposed 3-D method reaches the same level of accuracy, in terms of performance predictions, that the previously developed 2-D axisymmetric model and the well-known momentum-strip theory, while still using reasonable computers resources. It can be considered as a useful tool for the design of HAWTs. Its main advantages, however, are its intrinsic capacity to predict the details of the flow in the wake, and its capabilities of modelling arbitrary wind-turbine arrangements and including ground effects.

  1. Geomorphometric analysis of cave ceiling channels mapped with 3-D terrestrial laser scanning

    Science.gov (United States)

    Gallay, Michal; Hochmuth, Zdenko; Kaňuk, Ján; Hofierka, Jaroslav

    2016-05-01

    The change of hydrological conditions during the evolution of caves in carbonate rocks often results in a complex subterranean geomorphology, which comprises specific landforms such as ceiling channels, anastomosing half tubes, or speleothems organized vertically in different levels. Studying such complex environments traditionally requires tedious mapping; however, this is being replaced with terrestrial laser scanning technology. Laser scanning overcomes the problem of reaching high ceilings, providing new options to map underground landscapes with unprecedented level of detail and accuracy. The acquired point cloud can be handled conveniently with dedicated software, but applying traditional geomorphometry to analyse the cave surface is limited. This is because geomorphometry has been focused on parameterization and analysis of surficial terrain. The theoretical and methodological concept has been based on two-dimensional (2-D) scalar fields, which are sufficient for most cases of the surficial terrain. The terrain surface is modelled with a bivariate function of altitude (elevation) and represented by a raster digital elevation model. However, the cave is a 3-D entity; therefore, a different approach is required for geomorphometric analysis. In this paper, we demonstrate the benefits of high-resolution cave mapping and 3-D modelling to better understand the palaeohydrography of the Domica cave in Slovakia. This methodological approach adopted traditional geomorphometric methods in a unique manner and also new methods used in 3-D computer graphics, which can be applied to study other 3-D geomorphological forms.

  2. Computer-aided diagnosis of pulmonary nodules on CT scans: Segmentation and classification using 3D active contours

    International Nuclear Information System (INIS)

    We are developing a computer-aided diagnosis (CAD) system to classify malignant and benign lung nodules found on CT scans. A fully automated system was designed to segment the nodule from its surrounding structured background in a local volume of interest (VOI) and to extract image features for classification. Image segmentation was performed with a three-dimensional (3D) active contour (AC) method. A data set of 96 lung nodules (44 malignant, 52 benign) from 58 patients was used in this study. The 3D AC model is based on two-dimensional AC with the addition of three new energy components to take advantage of 3D information: (1) 3D gradient, which guides the active contour to seek the object surface (2) 3D curvature, which imposes a smoothness constraint in the z direction, and (3) mask energy, which penalizes contours that grow beyond the pleura or thoracic wall. The search for the best energy weights in the 3D AC model was guided by a simplex optimization method. Morphological and gray-level features were extracted from the segmented nodule. The rubber band straightening transform (RBST) was applied to the shell of voxels surrounding the nodule. Texture features based on run-length statistics were extracted from the RBST image. A linear discriminant analysis classifier with stepwise feature selection was designed using a second simplex optimization to select the most effective features. Leave-one-case-out resampling was used to train and test the CAD system. The system achieved a test area under the receiver operating characteristic curve (Az) of 0.83±0.04. Our preliminary results indicate that use of the 3D AC model and the 3D texture features surrounding the nodule is a promising approach to the segmentation and classification of lung nodules with CAD. The segmentation performance of the 3D AC model trained with our data set was evaluated with 23 nodules available in the Lung Image Database Consortium (LIDC). The lung nodule volumes segmented by the 3D AC

  3. Yield and Cost Analysis or 3D Stacked ICs

    NARCIS (Netherlands)

    Taouil, M.

    2014-01-01

    3D stacking is an emerging technology promising many benefits such as low latency between stacked dies, reduced power consumption, high bandwidth communication, improved form factor and package volume density, heterogeneous integration, and low-cost manufacturing. However, it requires modification o

  4. A Texture Analysis of 3D Radar Images

    NARCIS (Netherlands)

    Deiana, D.; Yarovoy, A.

    2009-01-01

    In this paper a texture feature coding method to be applied to high-resolution 3D radar images in order to improve target detection is developed. An automatic method for image segmentation based on texture features is proposed. The method has been able to automatically detect weak targets which fail

  5. Hybrid segmentation framework for 3D medical image analysis

    Science.gov (United States)

    Chen, Ting; Metaxas, Dimitri N.

    2003-05-01

    Medical image segmentation is the process that defines the region of interest in the image volume. Classical segmentation methods such as region-based methods and boundary-based methods cannot make full use of the information provided by the image. In this paper we proposed a general hybrid framework for 3D medical image segmentation purposes. In our approach we combine the Gibbs Prior model, and the deformable model. First, Gibbs Prior models are applied onto each slice in a 3D medical image volume and the segmentation results are combined to a 3D binary masks of the object. Then we create a deformable mesh based on this 3D binary mask. The deformable model will be lead to the edge features in the volume with the help of image derived external forces. The deformable model segmentation result can be used to update the parameters for Gibbs Prior models. These methods will then work recursively to reach a global segmentation solution. The hybrid segmentation framework has been applied to images with the objective of lung, heart, colon, jaw, tumor, and brain. The experimental data includes MRI (T1, T2, PD), CT, X-ray, Ultra-Sound images. High quality results are achieved with relatively efficient time cost. We also did validation work using expert manual segmentation as the ground truth. The result shows that the hybrid segmentation may have further clinical use.

  6. 3D neutronic/thermal-hydraulic coupled analysis of MYRRHA

    Energy Technology Data Exchange (ETDEWEB)

    Vazquez, M.; Martin-Fuertes, F. [CIEMAT, Avda. Complutense 40, 28040 Madrid (Spain)

    2012-07-01

    The current tendency in multiphysics calculations applied to reactor physics is the use of already validated computer codes, coupled by means of an iterative approach. In this paper such an approach is explained concerning neutronics and thermal-hydraulics coupled analysis with MCNPX and COBRA-IV codes using a driver program and file exchange between codes. MCNPX provides the neutronic analysis of heterogeneous nuclear systems, both in critical and subcritical states, while COBRA-IV is a subchannel code that can be used for rod bundles or core thermal-hydraulics analysis. In our model, the MCNP temperature dependence of nuclear data is handled via pseudo-material approach, mixing pre-generated cross section data set to obtain the material with the desired cross section temperature. On the other hand, COBRA-IV has been updated to allow for the simulation of liquid metal cooled reactors. The coupled computational tool can be applied to any geometry and coolant, as it is the case of single fuel assembly, at pin-by-pin level, or full core simulation with the average pin of each fuel-assembly. The coupling tool has been applied to the critical core layout of the SCK-CEN MYRRHA concept, an experimental LBE cooled fast reactor presently in engineering design stage. (authors)

  7. Computer-assisted diagnostic system for neurodegenerative dementia using brain SPECT and 3D-SSP

    Energy Technology Data Exchange (ETDEWEB)

    Ishii, Kazunari; Kanda, Tomonori; Uemura, Takafumi; Miyamoto, Naokazu; Yoshikawa, Toshiki [Hyogo Brain and Heart Center, Department of Radiology and Nuclear Medicine, Himeji, Hyogo (Japan); Shimada, Kenichi; Ohkawa, Shingo [Hyogo Brain and Heart Center, Institute for Aging Brain and Cognitive Disorders, Himeji, Hyogo (Japan); Minoshima, Satoshi [University of Washington, Radiology and Bioengineering, Department of Radiology, Seattle, WA (United States)

    2009-05-15

    To develop a computer-assisted automated diagnostic system to distinguish among Alzheimer disease (AD), dementia with Lewy bodies (DLB), and other degenerative disorders in patients with mild dementia. Single photon emission computed tomography (SPECT) images with injection of N-Isopropyl-p-[{sup 123}I]iodoamphetamine (IMP) were obtained from patients with mild degenerative dementia. First, datasets from 20 patients mild AD, 15 patients with dementia with DLB, and 17 healthy controls were used to develop an automated diagnosing system based on three-dimensional stereotactic surface projections (3D-SSP). AD- and DLB-specific regional templates were created using 3D-SSP, and critical Z scores in the templates were established. Datasets from 50 AD patients, 8 DLB patients, and 10 patients with non-AD/DLB type degenerative dementia (5 with frontotemporal dementia and 5 with progressive supranuclear palsy) were then used to test the diagnostic accuracy of the optimized automated system in comparison to the diagnostic interpretation of conventional IMP-SPECT images. These comparisons were performed to differentiate AD and DLB from non-AD/DLB and to distinguish AD from DLB. A receiver operating characteristic (ROC) analysis was performed. The area under the ROC curve (Az) and the accuracy of the automated diagnosis system were 0.89 and 82%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the visual inspection were 0.84 and 77%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the combination of visual inspection and this system were 0.96 and 91%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 66%, respectively, for AD vs. DLB patients. The system developed in the present study achieved as good discrimination of AD, DLB, and other degenerative disorders in patients with mild

  8. Computer-assisted diagnostic system for neurodegenerative dementia using brain SPECT and 3D-SSP

    International Nuclear Information System (INIS)

    To develop a computer-assisted automated diagnostic system to distinguish among Alzheimer disease (AD), dementia with Lewy bodies (DLB), and other degenerative disorders in patients with mild dementia. Single photon emission computed tomography (SPECT) images with injection of N-Isopropyl-p-[123I]iodoamphetamine (IMP) were obtained from patients with mild degenerative dementia. First, datasets from 20 patients mild AD, 15 patients with dementia with DLB, and 17 healthy controls were used to develop an automated diagnosing system based on three-dimensional stereotactic surface projections (3D-SSP). AD- and DLB-specific regional templates were created using 3D-SSP, and critical Z scores in the templates were established. Datasets from 50 AD patients, 8 DLB patients, and 10 patients with non-AD/DLB type degenerative dementia (5 with frontotemporal dementia and 5 with progressive supranuclear palsy) were then used to test the diagnostic accuracy of the optimized automated system in comparison to the diagnostic interpretation of conventional IMP-SPECT images. These comparisons were performed to differentiate AD and DLB from non-AD/DLB and to distinguish AD from DLB. A receiver operating characteristic (ROC) analysis was performed. The area under the ROC curve (Az) and the accuracy of the automated diagnosis system were 0.89 and 82%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the visual inspection were 0.84 and 77%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 65%, respectively, for AD vs. DLB patients. The mean Az and the accuracy of the combination of visual inspection and this system were 0.96 and 91%, respectively, for AD/DLB vs. non-AD/DLB patients, and 0.70 and 66%, respectively, for AD vs. DLB patients. The system developed in the present study achieved as good discrimination of AD, DLB, and other degenerative disorders in patients with mild dementia

  9. Gust Acoustics Computation with a Space-Time CE/SE Parallel 3D Solver

    Science.gov (United States)

    Wang, X. Y.; Himansu, A.; Chang, S. C.; Jorgenson, P. C. E.; Reddy, D. R. (Technical Monitor)

    2002-01-01

    The benchmark Problem 2 in Category 3 of the Third Computational Aero-Acoustics (CAA) Workshop is solved using the space-time conservation element and solution element (CE/SE) method. This problem concerns the unsteady response of an isolated finite-span swept flat-plate airfoil bounded by two parallel walls to an incident gust. The acoustic field generated by the interaction of the gust with the flat-plate airfoil is computed by solving the 3D (three-dimensional) Euler equations in the time domain using a parallel version of a 3D CE/SE solver. The effect of the gust orientation on the far-field directivity is studied. Numerical solutions are presented and compared with analytical solutions, showing a reasonable agreement.

  10. Sand transverse dune aerodynamics: 3D Coherent Flow Structures from a computational study

    CERN Document Server

    Bruno, Luca

    2015-01-01

    The engineering interest about dune fields is dictated by the their interaction with a number of human infrastructures in arid environments. The aerodynamic behaviour of sand dunes in atmospheric boundary layer belongs to the class of bluff bodies. Because of their simple geometry and their frequent occurrence in desert area, transverse sand dunes are usually adopted in literature as a benchmark to investigate dune aerodynamics by means of both computational or experimental approach, usually in nominally 2D setups. The writers suspect the flow in the wake is characterised by 3D features and affected by wind tunnel setup - e.g. blockage effect, duct side wall boundary layer, incoming velocity profile - when experimental studies are carried out. The present study aims at evaluating the 3D flow features of an idealised transverse dune under different setup conditions by means of computational simulations and to compare the obtained results with experimental measurements.

  11. Confocal 3D DNA Cytometry: Assessment of Required Coefficient of Variation by Computer Simulation

    Directory of Open Access Journals (Sweden)

    Lennert S. Ploeger

    2004-01-01

    Full Text Available Background: Confocal Laser Scanning Microscopy (CLSM provides the opportunity to perform 3D DNA content measurements on intact cells in thick histological sections. So far, sample size has been limited by the time consuming nature of the technology. Since the power of DNA histograms to resolve different stemlines depends on both the sample size and the coefficient of variation (CV of histogram peaks, interpretation of 3D CLSM DNA histograms might be hampered by both a small sample size and a large CV. The aim of this study was to analyze the required CV for 3D CLSM DNA histograms given a realistic sample size. Methods: By computer simulation, virtual histograms were composed for sample sizes of 20000, 10000, 5000, 1000, and 273 cells and CVs of 30, 25, 20, 15, 10 and 5%. By visual inspection, the histogram quality with respect to resolution of G0/1 and G2/M peaks of a diploid stemline was assessed. Results: As expected, the interpretability of DNA histograms deteriorated with decreasing sample sizes and higher CVs. For CVs of 15% and lower, a clearly bimodal peak pattern with well distinguishable G0/1 and G2/M peaks were still seen at a sample size of 273 cells, which is our current average sample size with 3D CLSM DNA cytometry. Conclusions: For unambiguous interpretation of DNA histograms obtained using 3D CLSM, a CV of at most 15% is tolerable at currently achievable sample sizes. To resolve smaller near diploid stemlines, a CV of 10% or better should be aimed at. With currently available 3D imaging technology, this CV is achievable.

  12. Evaluation of the Possibility of Applying Spatial 3D Imaging Using X-Ray Computed Tomography Reconstruction Methods for Quantitative Analysis of Multiphase Materials / Rentgenowska Analiza Ilościowa Materiałów Wielofazowych Z Wykorzystaniem Przestrzennego Obrazowania (3D Przy Użyciu Metod Rekonstrukcji Tomografii Komputerowej

    Directory of Open Access Journals (Sweden)

    Matysik P.

    2015-12-01

    Full Text Available In this paper the possibility of using X-ray computed tomography (CT in quantitative metallographic studies of homogeneous and composite materials is presented. Samples of spheroidal cast iron, Fe-Ti powder mixture compact and epoxy composite reinforced with glass fibers, were subjected to comparative structural tests. Volume fractions of each of the phase structure components were determined by conventional methods with the use of a scanning electron microscopy (SEM and X-ray diffraction (XRD quantitative analysis methods. These results were compared with those obtained by the method of spatial analysis of the reconstructed CT image. Based on the comparative analysis, taking into account the selectivity of data verification methods and the accuracy of the obtained results, the authors conclude that the method of computed tomography is suitable for quantitative analysis of several types of structural materials.

  13. High resolution 3D imaging of bump-bonds by means of synchrotron radiation computed laminography

    Science.gov (United States)

    Cecilia, A.; Hamann, E.; Koenig, T.; Xu, F.; Cheng, Y.; Helfen, L.; Ruat, M.; Scheel, M.; Zuber, M.; Baumbach, T.; Fauler, A.; Fiederle, M.

    2013-12-01

    During the flip-chip bonding process of a semiconductor sensor onto readout electronics, a formation of defects may take place, like solder joint displacements, voids, cracks, pores and bridges. This may result in blind spots on the detector, which are insensitive to photons and thus reduce the detector performance. In this work, the flip-chip interconnections of selected CdTe and GaAs Medipix detectors were investigated by synchrotron radiation computed laminography at a micrometer scale. The analysis of the volume rendering proved the presence of voids in the CdTe sensor flip-chip interconnections, with sizes between 3 μm and 9 μm. These voids can be harmful for the long term use of the device, because their presence weakens the adhesive strength between a contact and the readout electronics. Consequently, their formation needs to be avoided. The GaAs Medipix detectors investigated include two sensors that were produced with different flip-chip methods. The comparison of the 3D renderings of the bump-bond interconnections in the two GaAs sensors demonstrated the presence of a misalignment in the range of 5-12 μm between pixel passivation and bump-bonds in the detector produced with an older technique. In contrast to this, no misalignment was observed for the most recently produced detector. The only remarkable observation is the presence of ``satellites'' of solder that do not compromise the detector operation.

  14. 3D animation of facial plastic surgery based on computer graphics

    Science.gov (United States)

    Zhang, Zonghua; Zhao, Yan

    2013-12-01

    More and more people, especial women, are getting desired to be more beautiful than ever. To some extent, it becomes true because the plastic surgery of face was capable in the early 20th and even earlier as doctors just dealing with war injures of face. However, the effect of post-operation is not always satisfying since no animation could be seen by the patients beforehand. In this paper, by combining plastic surgery of face and computer graphics, a novel method of simulated appearance of post-operation will be given to demonstrate the modified face from different viewpoints. The 3D human face data are obtained by using 3D fringe pattern imaging systems and CT imaging systems and then converted into STL (STereo Lithography) file format. STL file is made up of small 3D triangular primitives. The triangular mesh can be reconstructed by using hash function. Top triangular meshes in depth out of numbers of triangles must be picked up by ray-casting technique. Mesh deformation is based on the front triangular mesh in the process of simulation, which deforms interest area instead of control points. Experiments on face model show that the proposed 3D animation facial plastic surgery can effectively demonstrate the simulated appearance of post-operation.

  15. 3D fast adaptive correlation imaging for large-scale gravity data based on GPU computation

    Science.gov (United States)

    Chen, Z.; Meng, X.; Guo, L.; Liu, G.

    2011-12-01

    In recent years, large scale gravity data sets have been collected and employed to enhance gravity problem-solving abilities of tectonics studies in China. Aiming at the large scale data and the requirement of rapid interpretation, previous authors have carried out a lot of work, including the fast gradient module inversion and Euler deconvolution depth inversion ,3-D physical property inversion using stochastic subspaces and equivalent storage, fast inversion using wavelet transforms and a logarithmic barrier method. So it can be say that 3-D gravity inversion has been greatly improved in the last decade. Many authors added many different kinds of priori information and constraints to deal with nonuniqueness using models composed of a large number of contiguous cells of unknown property and obtained good results. However, due to long computation time, instability and other shortcomings, 3-D physical property inversion has not been widely applied to large-scale data yet. In order to achieve 3-D interpretation with high efficiency and precision for geological and ore bodies and obtain their subsurface distribution, there is an urgent need to find a fast and efficient inversion method for large scale gravity data. As an entirely new geophysical inversion method, 3D correlation has a rapid development thanks to the advantage of requiring no a priori information and demanding small amount of computer memory. This method was proposed to image the distribution of equivalent excess masses of anomalous geological bodies with high resolution both longitudinally and transversely. In order to tranform the equivalence excess masses into real density contrasts, we adopt the adaptive correlation imaging for gravity data. After each 3D correlation imaging, we change the equivalence into density contrasts according to the linear relationship, and then carry out forward gravity calculation for each rectangle cells. Next, we compare the forward gravity data with real data, and

  16. Computation of 3D steady Navier-Stokes flow with free-surface gravity waves

    OpenAIRE

    Lewis, M. R.; Koren, Barry; Raven, H.C.

    2003-01-01

    In this paper an iterative method for the computation of stationary gravity-wave solutions is investigated, using a novel formulation of the free-surface (FS) boundary-value problem. This method requires the solution of a sequence of stationary Reynolds-Averaged Navier-Stokes subproblems employing the so-called quasi free-surface condition. The numerical performance of this new approach is investigated for two test cases. The first test case involves the computation of the 3D gravity-wave pat...

  17. THERM3D -- A boundary element computer program for transient heat conduction problems

    Energy Technology Data Exchange (ETDEWEB)

    Ingber, M.S. [New Mexico Univ., Albuquerque, NM (United States). Dept. of Mechanical Engineering

    1994-02-01

    The computer code THERM3D implements the direct boundary element method (BEM) to solve transient heat conduction problems in arbitrary three-dimensional domains. This particular implementation of the BEM avoids performing time-consuming domain integrations by approximating a ``generalized forcing function`` in the interior of the domain with the use of radial basis functions. An approximate particular solution is then constructed, and the original problem is transformed into a sequence of Laplace problems. The code is capable of handling a large variety of boundary conditions including isothermal, specified flux, convection, radiation, and combined convection and radiation conditions. The computer code is benchmarked by comparisons with analytic and finite element results.

  18. Comparative Analysis of Photogrammetric Methods for 3D Models for Museums

    DEFF Research Database (Denmark)

    Hafstað Ármannsdottir, Unnur Erla; Antón Castro, Francesc/François; Mioc, Darka

    2014-01-01

    to 3D models using Sketchup and Designing Reality. Finally, panoramic photography is discussed as a 2D alternative to 3D. Sketchup is a free-ware 3D drawing program and Designing Reality is a commercial program, which uses Structure from motion. For each program/method, the same comparative analysis...

  19. Comparison: RELAP5-3D systems analysis code and fluent CFD code momentum equation formulations

    International Nuclear Information System (INIS)

    Recently the Idaho National Engineering and Environmental Laboratory (INEEL), in conjunction with Fluent Corporation, have developed a new analysis tool by coupling the Fluent computational fluid dynamics (CFD) code to the RELAP5-3D advanced thermal-hydraulic analysis code. This tool enables researchers to perform detailed, two- or three-dimensional analyses using Fluent's CFD capability while the boundary conditions required by the Fluent calculation are provided by the balance-of-system model created using RELAP5-3D. Fluent and RELAP5-3D have strengths that complement one another. CFD codes, such as Fluent, are commonly used to analyze the flow behavior in regions of a system where complex flow patterns are expected or present. On the other hand, RELAP5-3D was developed to analyze the behavior of two-phase systems that could be modeled in one-dimension. Empirical relationships were used where first-principle physics were not well developed. Both Fluent and RELAP5-3D are exemplary in their areas of specialization. The differences between Fluent and RELAP5 fundamentally stem from their field equations. This study focuses on the differences between the momentum equation representations in the two codes (the continuity equation formulations are equivalent for single phase flow). First the differences between the momentum equations are summarized. Next the effect of the differences in the momentum equations are examined by comparing the results obtained using both codes to study the same problem, i.e., fully-developed turbulent pipe flow. Finally, conclusions regarding the significance of the differences are given. (author)

  20. Computer-aided diagnosis for osteoporosis using chest 3D CT images

    Science.gov (United States)

    Yoneda, K.; Matsuhiro, M.; Suzuki, H.; Kawata, Y.; Niki, N.; Nakano, Y.; Ohmatsu, H.; Kusumoto, M.; Tsuchida, T.; Eguchi, K.; Kaneko, M.

    2016-03-01

    The patients of osteoporosis comprised of about 13 million people in Japan and it is one of the problems the aging society has. In order to prevent the osteoporosis, it is necessary to do early detection and treatment. Multi-slice CT technology has been improving the three dimensional (3-D) image analysis with higher body axis resolution and shorter scan time. The 3-D image analysis using multi-slice CT images of thoracic vertebra can be used as a support to diagnose osteoporosis and at the same time can be used for lung cancer diagnosis which may lead to early detection. We develop automatic extraction and partitioning algorithm for spinal column by analyzing vertebral body structure, and the analysis algorithm of the vertebral body using shape analysis and a bone density measurement for the diagnosis of osteoporosis. Osteoporosis diagnosis support system obtained high extraction rate of the thoracic vertebral in both normal and low doses.

  1. A hybrid method for the computation of quasi-3D seismograms.

    Science.gov (United States)

    Masson, Yder; Romanowicz, Barbara

    2013-04-01

    The development of powerful computer clusters and efficient numerical computation methods, such as the Spectral Element Method (SEM) made possible the computation of seismic wave propagation in a heterogeneous 3D earth. However, the cost of theses computations is still problematic for global scale tomography that requires hundreds of such simulations. Part of the ongoing research effort is dedicated to the development of faster modeling methods based on the spectral element method. Capdeville et al. (2002) proposed to couple SEM simulations with normal modes calculation (C-SEM). Nissen-Meyer et al. (2007) used 2D SEM simulations to compute 3D seismograms in a 1D earth model. Thanks to these developments, and for the first time, Lekic et al. (2011) developed a 3D global model of the upper mantle using SEM simulations. At the local and continental scale, adjoint tomography that is using a lot of SEM simulation can be implemented on current computers (Tape, Liu et al. 2009). Due to their smaller size, these models offer higher resolution. They provide us with images of the crust and the upper part of the mantle. In an attempt to teleport such local adjoint tomographic inversions into the deep earth, we are developing a hybrid method where SEM computation are limited to a region of interest within the earth. That region can have an arbitrary shape and size. Outside this region, the seismic wavefield is extrapolated to obtain synthetic data at the Earth's surface. A key feature of the method is the use of a time reversal mirror to inject the wavefield induced by distant seismic source into the region of interest (Robertsson and Chapman 2000). We compute synthetic seismograms as follow: Inside the region of interest, we are using regional spectral element software RegSEM to compute wave propagation in 3D. Outside this region, the wavefield is extrapolated to the surface by convolution with the Green's functions from the mirror to the seismic stations. For now, these

  2. 3-D Navier-Stokes analysis of crossing, glancing shocks/turbulent boundary layer interactions

    Science.gov (United States)

    Reddy, D. R.

    1991-01-01

    Three dimensional viscous flow analysis is performed for a configuration where two crossing and glancing shocks interact with a turbulent boundary layer. A time marching 3-D full Navier-Stokes code, called PARC3D, is used to compute the flow field, and the solution is compared to the experimental data obtained at the NASA Lewis Research Center's 1 x 1 ft supersonic wind tunnel facility. The study is carried out as part of the continuing code assessment program in support of the generic hypersonic research at NASA Lewis. Detailed comparisons of static pressure fields and oil flow patterns are made with the corresponding solution on the wall containing the shock/boundary layer interaction in an effort to validate the code for hypersonic inlet applications.

  3. The 3-D Navier-Stokes analysis of crossing, glancing shocks/turbulent boundary layer interactions

    Science.gov (United States)

    Reddy, D. R.

    1991-01-01

    Three dimensional viscous flow analysis is performed for a configuration where two crossing and glancing shocks interact with a turbulent boundary layer. A time marching 3-D full Navier-Stokes code, called PARC3D, is used to compute the flow field, and the solution is compared to the experimental data obtained at the NASA Lewis Research Center's 1 x 1 ft supersonic wind tunnel facility. The study is carried out as part of the continuing code assessment program in support of the generic hypersonic research at NASA Lewis. Detailed comparisons of static pressure fields and oil flow patterns are made with the corresponding solution on the wall containing the shock/boundary layer interaction in an effort to validate the code for hypersonic inlet applications.

  4. A Computational Model for Suspended Large Rigid Bodies in 3D Unsteady Viscous Flows

    Science.gov (United States)

    Xiao, Feng

    1999-11-01

    A 3D numerical model for computing large rigid objects suspended in fluid flow has been developed. Rather than calculating the surface pressure upon the solid body, we evaluate the net force and torque based on a volume force formulation. The total effective force is obtained by summing up the forces at the Eulerian grids occupied by the rigid body. The effects of the moving bodies are coupled to the fluid flow by imposing the velocity field of the bodies to the fluid. A Poisson equation is used to compute the pressure over the whole domain. The objects are identified by color functions and calculated by the PPM scheme and a tangent function transformation which scales the transition region of the computed interface to a compact thickness. The model is then implemented on a parallel computer of distributed memory and validated with Stokes and low Reynolds number flows.

  5. COMPUTATION OF MINKOWSKI MEASURES ON 2D AND 3D BINARY IMAGES

    Directory of Open Access Journals (Sweden)

    David Legland

    2011-05-01

    Full Text Available Minkowski functionals encompass standard geometric parameters such as volume, area, length and the Euler-Poincaré characteristic. Software tools for computing approximations of Minkowski functionals on binary 2D or 3D images are now available based on mathematical methods due to Serra, Lang and Ohser. Minkowski functionals can not be used to describe spatial heterogeneity of structures. This description can be performed by using Minkowski measures, which are local versions of Minkowski functionals. In this paper, we discuss how to extend the computation of Minkowski functionals to the computation of Minkowski measures. Approximations of Minkowski measures are computed using fltering and look-up table transformations. The final result is represented as a grey-level image. Approximation errors are investigated based on numerical examples. Convergence and non convergence of the measure approximations are discussed. The measure of surface area is used to describe spatial heterogeneity of a synthetic structure, and of an image of tomato pericarp.

  6. Computational fluid dynamics simulations of blood flow regularized by 3D phase contrast MRI

    DEFF Research Database (Denmark)

    Rispoli, Vinicius C; Nielsen, Jon; Nayak, Krishna S;

    2015-01-01

    BACKGROUND: Phase contrast magnetic resonance imaging (PC-MRI) is used clinically for quantitative assessment of cardiovascular flow and function, as it is capable of providing directly-measured 3D velocity maps. Alternatively, vascular flow can be estimated from model-based computation fluid...... approach in regularizing 3D flow fields is evaluated. METHODS: The proposed algorithm incorporates both a Newtonian fluid physics model and a linear PC-MRI signal model. The model equations are solved numerically using a modified CFD algorithm. The numerical solution corresponds to the optimal solution of...... dynamics (CFD) calculations. CFD provides arbitrarily high resolution, but its accuracy hinges on model assumptions, while velocity fields measured with PC-MRI generally do not satisfy the equations of fluid dynamics, provide limited resolution, and suffer from partial volume effects. The purpose of this...

  7. Computer-assisted three-dimensional surgical planning: 3D virtual articulator: technical note.

    Science.gov (United States)

    Ghanai, S; Marmulla, R; Wiechnik, J; Mühling, J; Kotrikova, B

    2010-01-01

    This study presents a computer-assisted planning system for dysgnathia treatment. It describes the process of information gathering using a virtual articulator and how the splints are constructed for orthognathic surgery. The deviation of the virtually planned splints is shown in six cases on the basis of conventionally planned cases. In all cases the plaster models were prepared and scanned using a 3D laser scanner. Successive lateral and posterior-anterior cephalometric images were used for reconstruction before surgery. By identifying specific points on the X-rays and marking them on the virtual models, it was possible to enhance the 2D images to create a realistic 3D environment and to perform virtual repositioning of the jaw. A hexapod was used to transfer the virtual planning to the real splints. Preliminary results showed that conventional repositioning could be replicated using the virtual articulator.

  8. Parallel Adaptive Computation of Blood Flow in a 3D ``Whole'' Body Model

    Science.gov (United States)

    Zhou, M.; Figueroa, C. A.; Taylor, C. A.; Sahni, O.; Jansen, K. E.

    2008-11-01

    Accurate numerical simulations of vascular trauma require the consideration of a larger portion of the vasculature than previously considered, due to the systemic nature of the human body's response. A patient-specific 3D model composed of 78 connected arterial branches extending from the neck to the lower legs is constructed to effectively represent the entire body. Recently developed outflow boundary conditions that appropriately represent the downstream vasculature bed which is not included in the 3D computational domain are applied at 78 outlets. In this work, the pulsatile blood flow simulations are started on a fairly uniform, unstructured mesh that is subsequently adapted using a solution-based approach to efficiently resolve the flow features. The adapted mesh contains non-uniform, anisotropic elements resulting in resolution that conforms with the physical length scales present in the problem. The effects of the mesh resolution on the flow field are studied, specifically on relevant quantities of pressure, velocity and wall shear stress.

  9. 3D Massive MIMO Systems: Channel Modeling and Performance Analysis

    KAUST Repository

    Nadeem, Qurrat-Ul-Ain

    2015-03-01

    Multiple-input-multiple-output (MIMO) systems of current LTE releases are capable of adaptation in the azimuth only. More recently, the trend is to enhance the system performance by exploiting the channel\\'s degrees of freedom in the elevation through the dynamic adaptation of the vertical antenna beam pattern. This necessitates the derivation and characterization of three-dimensional (3D) channels. Over the years, channel models have evolved to address the challenges of wireless communication technologies. In parallel to theoretical studies on channel modeling, many standardized channel models like COST-based models, 3GPP SCM, WINNER, ITU have emerged that act as references for industries and telecommunication companies to assess system-level and link-level performances of advanced signal processing techniques over real-like channels. Given the existing channels are only two dimensional (2D) in nature; a large effort in channel modeling is needed to study the impact of the channel component in the elevation direction. The first part of this work sheds light on the current 3GPP activity around 3D channel modeling and beamforming, an aspect that to our knowledge has not been extensively covered by a research publication. The standardized MIMO channel model is presented, that incorporates both the propagation effects of the environment and the radio effects of the antennas. In order to facilitate future studies on the use of 3D beamforming, the main features of the proposed 3D channel model are discussed. A brief overview of the future 3GPP 3D channel model being outlined for the next generation of wireless networks is also provided. In the subsequent part of this work, we present an information-theoretic channel model for MIMO systems that supports the elevation dimension. The model is based on the principle of maximum entropy, which enables us to determine the distribution of the channel matrix consistent with the prior information on the angles of departure and

  10. Classification and quantification of pore shapes in sandstone reservoir rocks with 3-D X-ray micro-computed tomography

    Science.gov (United States)

    Schmitt, Mayka; Halisch, Matthias; Müller, Cornelia; Peres Fernandes, Celso

    2016-02-01

    Recent years have seen a growing interest in the characterization of the pore morphologies of reservoir rocks and how the spatial organization of pore traits affects the macro behavior of rock-fluid systems. With the availability of 3-D high-resolution imaging, such as x-ray micro-computed tomography (µ-CT), the detailed quantification of particle shapes has been facilitated by progress in computer science. Here, we show how the shapes of irregular rock particles (pores) can be classified and quantified based on binary 3-D images. The methodology requires the measurement of basic 3-D particle descriptors (length, width, and thickness) and a shape classification that involves the similarity of artificial objects, which is based on main pore network detachments and 3-D sample sizes. Two main pore components were identified from the analyzed volumes: pore networks and residual pore ganglia. A watershed algorithm was applied to preserve the pore morphology after separating the main pore networks, which is essential for the pore shape characterization. The results were validated for three sandstones (S1, S2, and S3) from distinct reservoirs, and most of the pore shapes were found to be plate- and cube-like, ranging from 39.49 to 50.94 % and from 58.80 to 45.18 % when the Feret caliper descriptor was investigated in a 10003 voxel volume. Furthermore, this study generalizes a practical way to correlate specific particle shapes, such as rods, blades, cuboids, plates, and cubes to characterize asymmetric particles of any material type with 3-D image analysis.

  11. Computational 3D reconstructions by optimization for cryo-electron microscopy

    Science.gov (United States)

    Yin, Zhye; Zheng, Yili; Doerschuk, Peter C.; Johnson, John E.

    2003-06-01

    An algorithm for the simultaneous 3-D reconstruction of several types of object, where each type of object may possibly have a rotational symmetry, from 2-D projection images, where for each image the type of object imaged, the projection orientation used to create the image, and the location of the object in the image are unknown, is described. The motivating application is the determination of the 3-D structure of small spherical viruses from cryo electron microscopy images. The algorithm is a maximum likelihood estimator which is computed by expectation maximization (EM). Due to the structure of the statistical model, the maximization step of EM can be easily computed but the expectation step requires 5-D numerical quadrature. The computational burden of the quadratures necessitates parallel computation and three different implementations of two different types of parallelism have been developed using pthreads (for shared memory processors) and MPI (for distributed memory processors). An example applying one of the MPI implementations, running on a 32 node PC cluster, to experimental images of Flock House Virus with comparison to the x-ray crystal diffraction structure of the virus is described.

  12. Metrological analysis of the human foot: 3D multisensor exploration

    Science.gov (United States)

    Muñoz Potosi, A.; Meneses Fonseca, J.; León Téllez, J.

    2011-08-01

    In the podiatry field, many of the foot dysfunctions are mainly generated due to: Congenital malformations, accidents or misuse of footwear. For the treatment or prevention of foot disorders, the podiatrist diagnoses prosthesis or specific adapted footwear, according to the real dimension of foot. Therefore, it is necessary to acquire 3D information of foot with 360 degrees of observation. As alternative solution, it was developed and implemented an optical system of threedimensional reconstruction based in the principle of laser triangulation. The system is constituted by an illumination unit that project a laser plane into the foot surface, an acquisition unit with 4 CCD cameras placed around of axial foot axis, an axial moving unit that displaces the illumination and acquisition units in the axial axis direction and a processing and exploration unit. The exploration software allows the extraction of distances on three-dimensional image, taking into account the topography of foot. The optical system was tested and their metrological performances were evaluated in experimental conditions. The optical system was developed to acquire 3D information in order to design and make more appropriate footwear.

  13. Customisable 3D printed microfluidics for integrated analysis and optimisation.

    Science.gov (United States)

    Monaghan, T; Harding, M J; Harris, R A; Friel, R J; Christie, S D R

    2016-08-16

    The formation of smart Lab-on-a-Chip (LOC) devices featuring integrated sensing optics is currently hindered by convoluted and expensive manufacturing procedures. In this work, a series of 3D-printed LOC devices were designed and manufactured via stereolithography (SL) in a matter of hours. The spectroscopic performance of a variety of optical fibre combinations were tested, and the optimum path length for performing Ultraviolet-visible (UV-vis) spectroscopy determined. The information gained in these trials was then used in a reaction optimisation for the formation of carvone semicarbazone. The production of high resolution surface channels (100-500 μm) means that these devices were capable of handling a wide range of concentrations (9 μM-38 mM), and are ideally suited to both analyte detection and process optimisation. This ability to tailor the chip design and its integrated features as a direct result of the reaction being assessed, at such a low time and cost penalty greatly increases the user's ability to optimise both their device and reaction. As a result of the information gained in this investigation, we are able to report the first instance of a 3D-printed LOC device with fully integrated, in-line monitoring capabilities via the use of embedded optical fibres capable of performing UV-vis spectroscopy directly inside micro channels. PMID:27452498

  14. Importance of a 3D forward modeling tool for surface wave analysis methods

    Science.gov (United States)

    Pageot, Damien; Le Feuvre, Mathieu; Donatienne, Leparoux; Philippe, Côte; Yann, Capdeville

    2016-04-01

    Since a few years, seismic surface waves analysis methods (SWM) have been widely developed and tested in the context of subsurface characterization and have demonstrated their effectiveness for sounding and monitoring purposes, e.g., high-resolution tomography of the principal geological units of California or real time monitoring of the Piton de la Fournaise volcano. Historically, these methods are mostly developed under the assumption of semi-infinite 1D layered medium without topography. The forward modeling is generally based on Thomson-Haskell matrix based modeling algorithm and the inversion is driven by Monte-Carlo sampling. Given their efficiency, SWM have been transfered to several scale of which civil engineering structures in order to, e.g., determine the so-called V s30 parameter or assess other critical constructional parameters in pavement engineering. However, at this scale, many structures may often exhibit 3D surface variations which drastically limit the efficiency of SWM application. Indeed, even in the case of an homogeneous structure, 3D geometry can bias the dispersion diagram of Rayleigh waves up to obtain discontinuous phase velocity curves which drastically impact the 1D mean velocity model obtained from dispersion inversion. Taking advantages of high-performance computing center accessibility and wave propagation modeling algorithm development, it is now possible to consider the use of a 3D elastic forward modeling algorithm instead of Thomson-Haskell method in the SWM inversion process. We use a parallelized 3D elastic modeling code based on the spectral element method which allows to obtain accurate synthetic data with very low numerical dispersion and a reasonable numerical cost. In this study, we choose dike embankments as an illustrative example. We first show that their longitudinal geometry may have a significant effect on dispersion diagrams of Rayleigh waves. Then, we demonstrate the necessity of 3D elastic modeling as a forward

  15. Using 2D and 3D Computer Games to Detect Colorblindness – a Comparative Study

    Directory of Open Access Journals (Sweden)

    Laskowski Maciej

    2015-12-01

    Full Text Available Computer games have accompanied the development of computer technologies since the very beginning. Despite their basic, purely entertainment-targeted appliance, games can also be used for many other purposes. Medical applications are especially interesting, as games (especially different kinds of simulations are widely used for training personnel, e.g. to perform certain procedures or in learning to use equipment. This allows the trainees to gain knowledge and proper habits, as well as test themselves in different situations without any risk. Computer games can also be used as a diagnostic tool, although this topic is still insufficiently researched. This paper discusses the possibility of using serious games for diagnosing color vision disorders, focusing especially on two problems: differences in diagnosing colorblindness using 2D and 3D environments, and the influence of individual features, such as reflex or agility, on the diagnostic process.

  16. A stabilized complementarity formulation for nonlinear analysis of 3D bimodular materials

    Institute of Scientific and Technical Information of China (English)

    L Zhang; H W Zhang; J Wu; B Yan

    2016-01-01

    Bi-modulus materials with different mechanical responses in tension and compression are often found in civil, composite, and biological engineering. Numerical analysis of bimodular materials is strongly nonlinear and convergence is usually a problem for traditional iterative schemes. This paper aims to develop a stabilized computational method for nonlinear analysis of 3D bimodular materials. Based on the parametric variational principle, a unified constitutive equa-tion of 3D bimodular materials is proposed, which allows the eight principal stress states to be indicated by three para-metric variables introduced in the principal stress directions. The original problem is transformed into a standard linear complementarity problem (LCP) by the parametric virtual work principle and a quadratic programming algorithm is developed by solving the LCP with the classic Lemke’s algo-rithm. Update of elasticity and stiffness matrices is avoided and, thus, the proposed algorithm shows an excellent conver-gence behavior compared with traditional iterative schemes. Numerical examples show that the proposed method is valid and can accurately analyze mechanical responses of 3D bimodular materials. Also, stability of the algorithm is greatly improved.

  17. A stabilized complementarity formulation for nonlinear analysis of 3D bimodular materials

    Science.gov (United States)

    Zhang, L.; Zhang, H. W.; Wu, J.; Yan, B.

    2016-06-01

    Bi-modulus materials with different mechanical responses in tension and compression are often found in civil, composite, and biological engineering. Numerical analysis of bimodular materials is strongly nonlinear and convergence is usually a problem for traditional iterative schemes. This paper aims to develop a stabilized computational method for nonlinear analysis of 3D bimodular materials. Based on the parametric variational principle, a unified constitutive equation of 3D bimodular materials is proposed, which allows the eight principal stress states to be indicated by three parametric variables introduced in the principal stress directions. The original problem is transformed into a standard linear complementarity problem (LCP) by the parametric virtual work principle and a quadratic programming algorithm is developed by solving the LCP with the classic Lemke's algorithm. Update of elasticity and stiffness matrices is avoided and, thus, the proposed algorithm shows an excellent convergence behavior compared with traditional iterative schemes. Numerical examples show that the proposed method is valid and can accurately analyze mechanical responses of 3D bimodular materials. Also, stability of the algorithm is greatly improved.

  18. Stiffness Analysis of 3-d.o.f. Overconstrained Translational Parallel Manipulators

    CERN Document Server

    Pashkevich, Anatoly; Wenger, Philippe

    2008-01-01

    The paper presents a new stiffness modelling method for overconstrained parallel manipulators, which is applied to 3-d.o.f. translational mechanisms. It is based on a multidimensional lumped-parameter model that replaces the link flexibility by localized 6-d.o.f. virtual springs. In contrast to other works, the method includes a FEA-based link stiffness evaluation and employs a new solution strategy of the kinetostatic equations, which allows computing the stiffness matrix for the overconstrained architectures and for the singular manipulator postures. The advantages of the developed technique are confirmed by application examples, which deal with comparative stiffness analysis of two translational parallel manipulators.

  19. Coronary computed tomography angiography with 320-row detector and using the AIDR-3D: initial experience

    International Nuclear Information System (INIS)

    Coronary computed tomography angiography (coronary CTA) is a powerful non-invasive imaging method to evaluate coronary artery disease. Nowadays, coronary CTA estimated effective radiation dose can be dramatically reduced using state-of-the-art scanners, such as 320-row detector CT (320-CT), without changing coronary CTA diagnostic accuracy. To optimize and further reduce the radiation dose, new iterative reconstruction algorithms were released recently by several CT manufacturers, and now they are used routinely in coronary CTA. This paper presents our first experience using coronary CTA with 320-CT and the Adaptive Iterative Dose Reduction 3D (AIDR-3D). In addition, we describe the current indications for coronary CTA in our practice as well as the acquisition standard protocols and protocols related to CT application for radiation dose reduction. In conclusion, coronary CTA radiation dose can be dramatically reduced following the 'as low as reasonable achievable' principle by combination of exam indication and well-documented technics for radiation dose reduction, such as beta blockers, low-kV, and also the newest iterative dose reduction software as AIDR-3D. (author)

  20. Generic camera model and its calibration for computational integral imaging and 3D reconstruction.

    Science.gov (United States)

    Li, Weiming; Li, Youfu

    2011-03-01

    Integral imaging (II) is an important 3D imaging technology. To reconstruct 3D information of the viewed objects, modeling and calibrating the optical pickup process of II are necessary. This work focuses on the modeling and calibration of an II system consisting of a lenslet array, an imaging lens, and a charge-coupled device camera. Most existing work on such systems assumes a pinhole array model (PAM). In this work, we explore a generic camera model that accommodates more generality. This model is an empirical model based on measurements, and we constructed a setup for its calibration. Experimental results show a significant difference between the generic camera model and the PAM. Images of planar patterns and 3D objects were computationally reconstructed with the generic camera model. Compared with the images reconstructed using the PAM, the images present higher fidelity and preserve more high spatial frequency components. To the best of our knowledge, this is the first attempt in applying a generic camera model to an II system.

  1. Analysis of 3-D Frictional Contact Mechanics Problems by a Boundary Element Method

    Institute of Scientific and Technical Information of China (English)

    KEUM Bangyong; LIU Yijun

    2005-01-01

    The development of two boundary element algorithms for solving 3-D, frictional, and linear elastostatic contact problems is reported in this paper. The algorithms employ nonconforming discretizations for solving 3-D boundary element models, which provide much needed flexibility in the boundary element modeling for 3-D contact problems. These algorithms are implemented in a new 3-D boundary element code and verified using several examples. For the numerical examples studied, the results using the new boundary element algorithms match very well with the results using a commercial finite element code, and clearly demonstrate the feasibility of the new boundary element approach for 3-D contact analysis.

  2. High-performance computational and geostatistical experiments for testing the capabilities of 3-d electrical tomography

    Energy Technology Data Exchange (ETDEWEB)

    Carle, S. F. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Daily, W. D. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Newmark, R. L. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Ramirez, A. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States); Tompson, A. [Lawrence Livermore National Lab. (LLNL), Livermore, CA (United States)

    1999-01-19

    This project explores the feasibility of combining geologic insight, geostatistics, and high-performance computing to analyze the capabilities of 3-D electrical resistance tomography (ERT). Geostatistical methods are used to characterize the spatial variability of geologic facies that control sub-surface variability of permeability and electrical resistivity Synthetic ERT data sets are generated from geostatistical realizations of alluvial facies architecture. The synthetic data sets enable comparison of the "truth" to inversion results, quantification of the ability to detect particular facies at particular locations, and sensitivity studies on inversion parameters

  3. Fatigue of hybrid glass/carbon composites: 3D computational studies

    DEFF Research Database (Denmark)

    Dai, Gaoming; Mishnaevsky, Leon

    2014-01-01

    3D computational simulations of fatigue of hybrid carbon/glass fiber reinforced composites is carried out using X-FEM and multifiber unit cell models. A new software code for the automatic generation of unit cell multifiber models of composites with randomly misaligned fibers of various properties...... cyclic loading effects) on fatigue behavior of the materials are carried out. It was demonstrated that the higher fraction of carbon fibers in hybrid composites is beneficial for the fatigue lifetime of the composites under tension-tension cyclic loading, but might have negative effect on the lifetime...

  4. The history of visual magic in computers how beautiful images are made in CAD, 3D, VR and AR

    CERN Document Server

    Peddie, Jon

    2013-01-01

    If you have ever looked at a fantastic adventure or science fiction movie, or an amazingly complex and rich computer game, or a TV commercial where cars or gas pumps or biscuits behaved liked people and wondered, ""How do they do that?"",  then you've experienced the magic of 3D worlds generated by a computer.3D in computers began as a way to represent automotive designs and illustrate the construction of molecules. 3D graphics use evolved to visualizations of simulated data and artistic representations of imaginary worlds. In order to overcome the processing limitations of the computer, graph

  5. 3D TRANSIENT COUPLED THERMO-ELASTIC-PLASTIC CONTACT SEALING ANALYSIS OF REACTOR PRESSURE VESSEL

    Institute of Scientific and Technical Information of China (English)

    Du Xuesong; Li Runfang; Lin Tengjiao

    2005-01-01

    Sealing analysis of sealing system in reactor pressure vessels is relevant with multiple nonlinear coupled-field effects, so even large-scale commercial finite element software cannot finish the complicated analysis. A fmite element method of 3D transient coupled thermo-elastic-plastic contact sealing analysis for reactor pressure vessels is presented, in which the surface nonlinearity,material nonlinearity, transient heat transfer nonlinearity and multiple coupled effect are taken into account and the sealing equation is coupling solved in iterative procedure. At the same time, a computational analysis program is developed, which is applied in the sealing analysis of experimental reactor pressure vessel, and the numerical results are in good coincidence with the experimental results. This program is also successful in analyzing the practical problem in engineering.

  6. 3D kinematic and dynamic analysis of the front crawl tumble turn in elite male swimmers.

    Science.gov (United States)

    Puel, F; Morlier, J; Avalos, M; Mesnard, M; Cid, M; Hellard, P

    2012-02-01

    The aim of this study was to identify kinematic and dynamic variables related to the best tumble turn times (3mRTT, the turn time from 3-m in to 3-m out, independent variable) in ten elite male swimmers using a three-dimensional (3D) underwater analysis protocol and the Lasso (least absolute shrinkage and selection operator) as statistical method. For each swimmer, the best-time turn was analyzed with five stationary and synchronized underwater cameras. The 3D reconstruction was performed using the Direct Linear Transformation algorithm. An underwater piezoelectric 3D force platform completed the set-up to compute dynamic variables. Data were smoothed by the Savitzky-Golay filtering method. Three variables were considered relevant in the best Lasso model (3mRTT=2.58-0.425 RD+0.204 VPe+0.0046 TD): the head-wall distance where rotation starts (RD), the horizontal speed at the force peak (VPe), and the 3D length of the path covered during the turn (TD). Furthermore, bivariate analysis showed that upper body (CUBei) and lower limb extension indexes at first contact (CLLei) were also linked to the turn time (r=-0.65 and pvariables). Thus the best turn times were associated with a long RD, slower VPe and reduced TD. By an early transverse rotation, male elite swimmers reach the wall with a slightly flexed posture that results in fast extension. These swimmers opt for a movement that is oriented forward and they focus on reducing the distance covered. PMID:22176710

  7. Quick, Accurate, Smart: 3D Computer Vision Technology Helps Assessing Confined Animals’ Behaviour

    Science.gov (United States)

    Calderara, Simone; Pistocchi, Simone; Cucchiara, Rita; Podaliri-Vulpiani, Michele; Messori, Stefano; Ferri, Nicola

    2016-01-01

    Mankind directly controls the environment and lifestyles of several domestic species for purposes ranging from production and research to conservation and companionship. These environments and lifestyles may not offer these animals the best quality of life. Behaviour is a direct reflection of how the animal is coping with its environment. Behavioural indicators are thus among the preferred parameters to assess welfare. However, behavioural recording (usually from video) can be very time consuming and the accuracy and reliability of the output rely on the experience and background of the observers. The outburst of new video technology and computer image processing gives the basis for promising solutions. In this pilot study, we present a new prototype software able to automatically infer the behaviour of dogs housed in kennels from 3D visual data and through structured machine learning frameworks. Depth information acquired through 3D features, body part detection and training are the key elements that allow the machine to recognise postures, trajectories inside the kennel and patterns of movement that can be later labelled at convenience. The main innovation of the software is its ability to automatically cluster frequently observed temporal patterns of movement without any pre-set ethogram. Conversely, when common patterns are defined through training, a deviation from normal behaviour in time or between individuals could be assessed. The software accuracy in correctly detecting the dogs’ behaviour was checked through a validation process. An automatic behaviour recognition system, independent from human subjectivity, could add scientific knowledge on animals’ quality of life in confinement as well as saving time and resources. This 3D framework was designed to be invariant to the dog’s shape and size and could be extended to farm, laboratory and zoo quadrupeds in artificial housing. The computer vision technique applied to this software is innovative in non

  8. Quick, Accurate, Smart: 3D Computer Vision Technology Helps Assessing Confined Animals' Behaviour.

    Directory of Open Access Journals (Sweden)

    Shanis Barnard

    Full Text Available Mankind directly controls the environment and lifestyles of several domestic species for purposes ranging from production and research to conservation and companionship. These environments and lifestyles may not offer these animals the best quality of life. Behaviour is a direct reflection of how the animal is coping with its environment. Behavioural indicators are thus among the preferred parameters to assess welfare. However, behavioural recording (usually from video can be very time consuming and the accuracy and reliability of the output rely on the experience and background of the observers. The outburst of new video technology and computer image processing gives the basis for promising solutions. In this pilot study, we present a new prototype software able to automatically infer the behaviour of dogs housed in kennels from 3D visual data and through structured machine learning frameworks. Depth information acquired through 3D features, body part detection and training are the key elements that allow the machine to recognise postures, trajectories inside the kennel and patterns of movement that can be later labelled at convenience. The main innovation of the software is its ability to automatically cluster frequently observed temporal patterns of movement without any pre-set ethogram. Conversely, when common patterns are defined through training, a deviation from normal behaviour in time or between individuals could be assessed. The software accuracy in correctly detecting the dogs' behaviour was checked through a validation process. An automatic behaviour recognition system, independent from human subjectivity, could add scientific knowledge on animals' quality of life in confinement as well as saving time and resources. This 3D framework was designed to be invariant to the dog's shape and size and could be extended to farm, laboratory and zoo quadrupeds in artificial housing. The computer vision technique applied to this software is

  9. Quick, Accurate, Smart: 3D Computer Vision Technology Helps Assessing Confined Animals' Behaviour.

    Science.gov (United States)

    Barnard, Shanis; Calderara, Simone; Pistocchi, Simone; Cucchiara, Rita; Podaliri-Vulpiani, Michele; Messori, Stefano; Ferri, Nicola

    2016-01-01

    Mankind directly controls the environment and lifestyles of several domestic species for purposes ranging from production and research to conservation and companionship. These environments and lifestyles may not offer these animals the best quality of life. Behaviour is a direct reflection of how the animal is coping with its environment. Behavioural indicators are thus among the preferred parameters to assess welfare. However, behavioural recording (usually from video) can be very time consuming and the accuracy and reliability of the output rely on the experience and background of the observers. The outburst of new video technology and computer image processing gives the basis for promising solutions. In this pilot study, we present a new prototype software able to automatically infer the behaviour of dogs housed in kennels from 3D visual data and through structured machine learning frameworks. Depth information acquired through 3D features, body part detection and training are the key elements that allow the machine to recognise postures, trajectories inside the kennel and patterns of movement that can be later labelled at convenience. The main innovation of the software is its ability to automatically cluster frequently observed temporal patterns of movement without any pre-set ethogram. Conversely, when common patterns are defined through training, a deviation from normal behaviour in time or between individuals could be assessed. The software accuracy in correctly detecting the dogs' behaviour was checked through a validation process. An automatic behaviour recognition system, independent from human subjectivity, could add scientific knowledge on animals' quality of life in confinement as well as saving time and resources. This 3D framework was designed to be invariant to the dog's shape and size and could be extended to farm, laboratory and zoo quadrupeds in artificial housing. The computer vision technique applied to this software is innovative in non

  10. Computer-controlled dynamic mode multidirectional UV lithography for 3D microfabrication

    International Nuclear Information System (INIS)

    Computer-controlled dynamic mode multidirectional ultraviolet (UV) lithography has been demonstrated using a collimated UV light source, a substrate-holding stage equipped with two stepper motors (one for tilting and the other for rotation), a controller with programming software and a laptop computer. The tilting and rotational angles of the stage in motion are accurately controlled during UV exposure as programmed by the user to produce complex three-dimensional (3D) microstructures. Process parameters include the initial and final tilting and rotational angles of the stage, and the relative angular velocities of the two motors in addition to the normal fabrication process parameters of UV lithography such as optical dose, baking time, and developing time and condition. Symmetric patterns can be generated by a simple synchronous mode dynamic operation, where both the angular velocities of the tilting motion and the rotating motion are set equal or harmonically related. More complex and non-symmetric patterns can be obtained using a piecewise synchronous mode, where the relationship between the angular velocities of the two motors is described not with a single coefficient but with a set of coefficients. 3D structures fabricated from the synchronous mode operation include the four-leaf clover horn and the cardiac horn while the ones from the piecewise synchronous mode are a vertical triangular slab, a screwed wind vane and arbitrary shape horns. Ray trace simulation has been performed using a mathematical tool in a spherical coordinate system and the simulated 3D patterns show good agreement with the fabricated ones.

  11. 3D modeling method for computer animate based on modified weak structured light method

    Science.gov (United States)

    Xiong, Hanwei; Pan, Ming; Zhang, Xiangwei

    2010-11-01

    A simple and affordable 3D scanner is designed in this paper. Three-dimensional digital models are playing an increasingly important role in many fields, such as computer animate, industrial design, artistic design and heritage conservation. For many complex shapes, optical measurement systems are indispensable to acquiring the 3D information. In the field of computer animate, such an optical measurement device is too expensive to be widely adopted, and on the other hand, the precision is not as critical a factor in that situation. In this paper, a new cheap 3D measurement system is implemented based on modified weak structured light, using only a video camera, a light source and a straight stick rotating on a fixed axis. For an ordinary weak structured light configuration, one or two reference planes are required, and the shadows on these planes must be tracked in the scanning process, which destroy the convenience of this method. In the modified system, reference planes are unnecessary, and size range of the scanned objects is expanded widely. A new calibration procedure is also realized for the proposed method, and points cloud is obtained by analyzing the shadow strips on the object. A two-stage ICP algorithm is used to merge the points cloud from different viewpoints to get a full description of the object, and after a series of operations, a NURBS surface model is generated in the end. A complex toy bear is used to verify the efficiency of the method, and errors range from 0.7783mm to 1.4326mm comparing with the ground truth measurement.

  12. DYNA3D analysis of the DT-20 shipping container

    Energy Technology Data Exchange (ETDEWEB)

    Logan, R.W.; Lovejoy, S.C.

    1991-08-22

    A DYNA3D model of the DT-20 shipping container was constructed. Impact onto a rigid steel surface at a velocity of 44 ft/sec (30 foot gravity drop) was studied. The orientation of most interest was a side-drop, but end and corner drops were also studied briefly. The assembly for the baseline side impact contained a 150 lb. payload. During this drop, the outer drum sustains plastic strains of up to 0.15, with most the deformation near the rim. The plywood/Celotex packing is crushed about 3 inches. The inner sealed can sees significant stresses, but barely reaches the onset of yielding in some local areas. Based on hand calculations, the bolts joining the can halves could see stresses near 50 ksi. It is felt that overall, the container should survive this drop. However, detailed modeling of the rim closure and the center bolted joint was not possible due to time constraints. Furthermore, better material models and properties are needed for the Celotex, plywood, and honeycomb in particular. 39 figs., 1 tab.

  13. Tensorial analysis of Eshelby stresses in 3D supercooled liquids.

    Science.gov (United States)

    Lemaître, Anaël

    2015-10-28

    It was recently proposed that the local rearrangements governing relaxation in supercooled liquids impress on the liquid medium long-ranged (Eshelby) stress fluctuations that accumulate over time. From this viewpoint, events must be characterized by elastic dipoles, which are second order tensors, and Eshelby fields are expected to show up in stress and stress increment correlations, which are fourth order tensor fields. We construct here an analytical framework that permits analyzing such tensorial correlations in isotropic media in view of accessing Eshelby fields. Two spherical bases are introduced, which correspond to Cartesian and spherical coordinates for tensors. We show how they can be used to decompose stress correlations and thus test such properties as isotropy and power-law scalings. Eshelby fields and the predicted stress correlations in an infinite medium are shown to belong to an algebra that can conveniently be described using the spherical tensor bases. Using this formalism, we demonstrate that the inherent stress field of 3D supercooled liquids is power law correlated and carries the signature of Eshelby fields, thus supporting the idea that relaxation events give rise to Eshelby stresses that accumulate over time. PMID:26520535

  14. 3D-CT imaging processing for qualitative and quantitative analysis of maxillofacial cysts and tumors

    International Nuclear Information System (INIS)

    The objective of this study was to evaluate spiral-computed tomography (3D-CT) images of 20 patients presenting with cysts and tumors in the maxillofacial complex, in order to compare the surface and volume techniques of image rendering. The qualitative and quantitative appraisal indicated that the volume technique allowed a more precise and accurate observation than the surface method. On the average, the measurements obtained by means of the 3D volume-rendering technique were 6.28% higher than those obtained by means of the surface method. The sensitivity of the 3D surface technique was lower than that of the 3D volume technique for all conditions stipulated in the diagnosis and evaluation of lesions. We concluded that the 3D-CT volume rendering technique was more reproducible and sensitive than the 3D-CT surface method, in the diagnosis, treatment planning and evaluation of maxillofacial lesions, especially those with intra-osseous involvement. (author)

  15. Reconstruction Accuracy Assessment of Surface and Underwater 3D Motion Analysis: A New Approach

    Science.gov (United States)

    de Jesus, Kelly; de Jesus, Karla; Figueiredo, Pedro; Vilas-Boas, João Paulo; Fernandes, Ricardo Jorge; Machado, Leandro José

    2015-01-01

    This study assessed accuracy of surface and underwater 3D reconstruction of a calibration volume with and without homography. A calibration volume (6000 × 2000 × 2500 mm) with 236 markers (64 above and 88 underwater control points—with 8 common points at water surface—and 92 validation points) was positioned on a 25 m swimming pool and recorded with two surface and four underwater cameras. Planar homography estimation for each calibration plane was computed to perform image rectification. Direct linear transformation algorithm for 3D reconstruction was applied, using 1600000 different combinations of 32 and 44 points out of the 64 and 88 control points for surface and underwater markers (resp.). Root Mean Square (RMS) error with homography of control and validations points was lower than without it for surface and underwater cameras (P ≤ 0.03). With homography, RMS errors of control and validation points were similar between surface and underwater cameras (P ≥ 0.47). Without homography, RMS error of control points was greater for underwater than surface cameras (P ≤ 0.04) and the opposite was observed for validation points (P ≤ 0.04). It is recommended that future studies using 3D reconstruction should include homography to improve swimming movement analysis accuracy. PMID:26175796

  16. Reconstruction Accuracy Assessment of Surface and Underwater 3D Motion Analysis: A New Approach

    Directory of Open Access Journals (Sweden)

    Kelly de Jesus

    2015-01-01

    Full Text Available This study assessed accuracy of surface and underwater 3D reconstruction of a calibration volume with and without homography. A calibration volume (6000 × 2000 × 2500 mm with 236 markers (64 above and 88 underwater control points—with 8 common points at water surface—and 92 validation points was positioned on a 25 m swimming pool and recorded with two surface and four underwater cameras. Planar homography estimation for each calibration plane was computed to perform image rectification. Direct linear transformation algorithm for 3D reconstruction was applied, using 1600000 different combinations of 32 and 44 points out of the 64 and 88 control points for surface and underwater markers (resp.. Root Mean Square (RMS error with homography of control and validations points was lower than without it for surface and underwater cameras (P≤0.03. With homography, RMS errors of control and validation points were similar between surface and underwater cameras (P≥0.47. Without homography, RMS error of control points was greater for underwater than surface cameras (P≤0.04 and the opposite was observed for validation points (P≤0.04. It is recommended that future studies using 3D reconstruction should include homography to improve swimming movement analysis accuracy.

  17. Compute extremely low-frequency electromagnetic field exposure by 3-D impendance method

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A 3-D impedance method has been introduced to compute the electric currents induced in a human body exposed to extremely low-frequency electromagnetic field.The 3-D impedance method has been deduced from Maxwell equations and is put into the computation and simulation effectively to the visible human body model, which has 196×114×626 cells and more than 40 types of tissues.As the result, two representative cases are investigated.One is exposure of the human body to 100 μT (1 000 mG), the limit recommended by the International Commission on Non-Ionizing Radiation Protection for the public and the other one is the exposure of human body to 0.4 μT (4 mG), the level at which a statistical link appears with a doubled risk of development of childhood leukaemia.The distribution of induced current density can be obtained and the maximum of induced current are found to be 16 mA/m2 and 0.07 mA/m2.

  18. Using Computer-Aided Design Software and 3D Printers to Improve Spatial Visualization

    Science.gov (United States)

    Katsio-Loudis, Petros; Jones, Millie

    2015-01-01

    Many articles have been published on the use of 3D printing technology. From prefabricated homes and outdoor structures to human organs, 3D printing technology has found a niche in many fields, but especially education. With the introduction of AutoCAD technical drawing programs and now 3D printing, learners can use 3D printed models to develop…

  19. Fast computation of scattering from 3D complex structures by MLFMA

    Institute of Scientific and Technical Information of China (English)

    Hu Jun; Nie Zaiping; Que Xiaofeng; Meng Min

    2008-01-01

    This paper introduces the research work on the extension of multilevel fast multipole algorithm (MLFMA) to 3D complex structures including coating object,thin dielectric sheet,composite dielectric and conductor,cavity.The impedance boundary condition is used for scattering from the object coated by thin lossy material.Instead of volume integral equation,surface integral equation is applied in case of thin dielectric sheet through resistive sheet boundary condition.To realize the fast computation of scattering from composite homogeneous dielectric and conductor,the surface integral equation based on equivalence principle is used.Compared with the traditional volume integral equation,the surface integral equation reduces greatly the number of unknowns.To compute conducting cavity with electrically large aperture,an electric field integral equation is applied.Some numerical results are given to demonstrate the validity and accuracy of the present methods.

  20. A review of automated image understanding within 3D baggage computed tomography security screening.

    Science.gov (United States)

    Mouton, Andre; Breckon, Toby P

    2015-01-01

    Baggage inspection is the principal safeguard against the transportation of prohibited and potentially dangerous materials at airport security checkpoints. Although traditionally performed by 2D X-ray based scanning, increasingly stringent security regulations have led to a growing demand for more advanced imaging technologies. The role of X-ray Computed Tomography is thus rapidly expanding beyond the traditional materials-based detection of explosives. The development of computer vision and image processing techniques for the automated understanding of 3D baggage-CT imagery is however, complicated by poor image resolutions, image clutter and high levels of noise and artefacts. We discuss the recent and most pertinent advancements and identify topics for future research within the challenging domain of automated image understanding for baggage security screening CT.

  1. 3D DIRECTIONAL MATHEMATICAL MORPHOLOGY FOR ANALYSIS OF FIBER ORIENTATIONS

    Directory of Open Access Journals (Sweden)

    Hellen Altendorf

    2011-05-01

    Full Text Available In this paper we present algorithms for measuring local characteristics of random fiber systems. The calculation of the local directions and radii is based on directional distance transforms and evaluation of the inertia moments and axes of the resulting extremities of the centralized, directed chords. The method provides continuous results while minimizing the runtime by using few sampled directions. Furthermore several steps of improvement for the computation of orientation and radius information are presented. The algorithms are evaluated using synthetic data and applied to images of realmicrostructures obtained by computer tomography.

  2. "Let's get physical": advantages of a physical model over 3D computer models and textbooks in learning imaging anatomy.

    Science.gov (United States)

    Preece, Daniel; Williams, Sarah B; Lam, Richard; Weller, Renate

    2013-01-01

    Three-dimensional (3D) information plays an important part in medical and veterinary education. Appreciating complex 3D spatial relationships requires a strong foundational understanding of anatomy and mental 3D visualization skills. Novel learning resources have been introduced to anatomy training to achieve this. Objective evaluation of their comparative efficacies remains scarce in the literature. This study developed and evaluated the use of a physical model in demonstrating the complex spatial relationships of the equine foot. It was hypothesized that the newly developed physical model would be more effective for students to learn magnetic resonance imaging (MRI) anatomy of the foot than textbooks or computer-based 3D models. Third year veterinary medicine students were randomly assigned to one of three teaching aid groups (physical model; textbooks; 3D computer model). The comparative efficacies of the three teaching aids were assessed through students' abilities to identify anatomical structures on MR images. Overall mean MRI assessment scores were significantly higher in students utilizing the physical model (86.39%) compared with students using textbooks (62.61%) and the 3D computer model (63.68%) (P computer model groups (P = 0.685). Student feedback was also more positive in the physical model group compared with both the textbook and 3D computer model groups. Our results suggest that physical models may hold a significant advantage over alternative learning resources in enhancing visuospatial and 3D understanding of complex anatomical architecture, and that 3D computer models have significant limitations with regards to 3D learning.

  3. Correlating 3D Experiments with Dynamic Figures Analysis

    Directory of Open Access Journals (Sweden)

    Liliana Saidon

    2010-05-01

    Full Text Available Integrating geometry, algebra and calculus in computer-mediated activities by means of a free software such as GeoGebra is a challenge for all participants involved, and requires a reciprocal conceptual exploratory alternative for the teaching and learning of mathematics at pre-universitary level. This approach allows for the development of meta-mathematical competences in technical fields at introductory levels in sciences and enhances “projecting competences”.

  4. 3D CFD Analysis of a Vertical Axis Wind Turbine

    Directory of Open Access Journals (Sweden)

    Andrea Alaimo

    2015-04-01

    Full Text Available To analyze the complex and unsteady aerodynamic flow associated with wind turbine functioning, computational fluid dynamics (CFD is an attractive and powerful method. In this work, the influence of different numerical aspects on the accuracy of simulating a rotating wind turbine is studied. In particular, the effects of mesh size and structure, time step and rotational velocity have been taken into account for simulation of different wind turbine geometries. The applicative goal of this study is the comparison of the performance between a straight blade vertical axis wind turbine and a helical blade one. Analyses are carried out through the use of computational fluid dynamic ANSYS® Fluent® software, solving the Reynolds averaged Navier–Stokes (RANS equations. At first, two-dimensional simulations are used in a preliminary setup of the numerical procedure and to compute approximated performance parameters, namely the torque, power, lift and drag coefficients. Then, three-dimensional simulations are carried out with the aim of an accurate determination of the differences in the complex aerodynamic flow associated with the straight and the helical blade turbines. Static and dynamic results are then reported for different values of rotational speed.

  5. 3D product authenticity model for online retail: An invariance analysis

    OpenAIRE

    Algharabat, R; Dennis, C.

    2009-01-01

    This study investigates the effects of different levels of invariance analysis on three dimensional (3D) product authenticity model (3DPAM) constructs in the e- retailing context. A hypothetical retailer Web site presents a variety of laptops using 3D product visualisations. The proposed conceptual model achieves acceptable fit and the hypothesised paths are all valid. We empirically investigate the invariance across the subgroups to validate the results of our 3DPAM. We concluded that the 3D...

  6. The approximate analysis of the electromagnetic characters of 3-D radome by complex astigmatic wave theory

    Science.gov (United States)

    Wang, Yueqing; Wu, Guisheng; Chen, Zhenyang

    The complex astigmatic wave, which imitates the 3-D beam in high-frequency, is an effective method to analyze the electromagnetic characters of the 3-D arbitrarily curved radome. A number of calculations for the ellipsoidal sandwich radome are performed, and the stereoscopic graphics of the results are constructed. Comparing with the experiments, it is shown that this method can be used to simplify analysis and optimization design for many kinds of 3-D radome.

  7. Numerical computation of critical properties and atomic basins from 3D grid electron densities

    CERN Document Server

    Katan, C; Lecomte, C; Guezo, M; Oison, V; Souhassou, M

    2003-01-01

    InteGriTy is a software package that performs topological analysis following AIM approach on electron densities given on 3D grids. Use of tricubic interpolation is made to get the density, its gradient and hessian matrix at any required position. Critical points and integrated atomic properties have been derived from theoretical densities calculated for the compounds NaCl and TTF-2,5Cl2BQ, thus covering the different kinds of chemical bonds: ionic, covalent, hydrogen bonds and other intermolecular contacts.

  8. Creating computer aided 3D model of spleen and kidney based based on Visible Human Project

    International Nuclear Information System (INIS)

    To investigate the efficacy of computer aided 3-dimensional (3D) reconstruction technique on visualization and modeling of gross anatomical structures with an affordable methodology applied on the spleen and kidney. From The Visible Human Project Dataset cryosection images, developed by the National Library of Medicine, the spleen and kidney sections were preferred to be used due to their highly distinct contours. The software used for the reconstruction were Surf Driver 3.5.3 for Mac and Cinema 4D X L version 7.1 for Mac OS X. This study was carried out in May 2004 at the Department of Anatomy, Hacettepe University, Ankara, Turkey. As a result of this study, it is determined that these 2 programs could be effectively used both for 3D modeling of the mentioned organs and volumetric analyses on these models. It is also seen that it is possible to hold the physical models of these gross anatomical digital ones with stereolithography technique by means of the data exchange file format provided by the program and present such images as anaglyph. Surf Driver 3.5.3 for Mac OS and Cinema 4 DXL version 7.1 for Mac OS X can be used effectively for reconstruction of gross anatomical structures from serial parallel sections with distinct contours such as spleen and kidney and the animation of models. These software constitute a highly effective way of getting volumetric calculations, spatial relations and morphometrical measurements of reconstructed structures. (author)

  9. Performance analysis of high quality parallel preconditioners applied to 3D finite element structural analysis

    Energy Technology Data Exchange (ETDEWEB)

    Kolotilina, L.; Nikishin, A.; Yeremin, A. [and others

    1994-12-31

    The solution of large systems of linear equations is a crucial bottleneck when performing 3D finite element analysis of structures. Also, in many cases the reliability and robustness of iterative solution strategies, and their efficiency when exploiting hardware resources, fully determine the scope of industrial applications which can be solved on a particular computer platform. This is especially true for modern vector/parallel supercomputers with large vector length and for modern massively parallel supercomputers. Preconditioned iterative methods have been successfully applied to industrial class finite element analysis of structures. The construction and application of high quality preconditioners constitutes a high percentage of the total solution time. Parallel implementation of high quality preconditioners on such architectures is a formidable challenge. Two common types of existing preconditioners are the implicit preconditioners and the explicit preconditioners. The implicit preconditioners (e.g. incomplete factorizations of several types) are generally high quality but require solution of lower and upper triangular systems of equations per iteration which are difficult to parallelize without deteriorating the convergence rate. The explicit type of preconditionings (e.g. polynomial preconditioners or Jacobi-like preconditioners) require sparse matrix-vector multiplications and can be parallelized but their preconditioning qualities are less than desirable. The authors present results of numerical experiments with Factorized Sparse Approximate Inverses (FSAI) for symmetric positive definite linear systems. These are high quality preconditioners that possess a large resource of parallelism by construction without increasing the serial complexity.

  10. Inverse Multifractal Analysis of Different Frame Types of Multiview 3D Video

    Directory of Open Access Journals (Sweden)

    A. Zeković

    2014-11-01

    Full Text Available In this paper, the results of multifractal characterization of multiview 3D video are presented. Analyses are performed for different views of multiview video and for different frame types of video. Multifractal analysis is performed by the histogram method. Due to the advantages of the selected method for determining the spectrum, the inverse multifractal analysis of multiview 3D video was also possible. A discussion of the results obtained by the inverse multifractal analysis of multiview 3D video is presented, taking into account the frame type and whether the original frames belong to the left or right view of multiview 3D video. In the analysis, publicly available multiview 3D video traces were used.

  11. An improved version of NCOREL: A computer program for 3-D nonlinear supersonic potential flow computations

    Science.gov (United States)

    Siclari, Michael J.

    1988-01-01

    A computer code called NCOREL (for Nonconical Relaxation) has been developed to solve for supersonic full potential flows over complex geometries. The method first solves for the conical at the apex and then marches downstream in a spherical coordinate system. Implicit relaxation techniques are used to numerically solve the full potential equation at each subsequent crossflow plane. Many improvements have been made to the original code including more reliable numerics for computing wing-body flows with multiple embedded shocks, inlet flow through simulation, wake model and entropy corrections. Line relaxation or approximate factorization schemes are optionally available. Improved internal grid generation using analytic conformal mappings, supported by a simple geometric Harris wave drag input that was originally developed for panel methods and internal geometry package are some of the new features.

  12. Computer-aided detection of clustered microcalcifications in digital breast tomosynthesis: A 3D approach

    Science.gov (United States)

    Sahiner, Berkman; Chan, Heang-Ping; Hadjiiski, Lubomir M.; Helvie, Mark A.; Wei, Jun; Zhou, Chuan; Lu, Yao

    2012-01-01

    Purpose: To design a computer-aided detection (CADe) system for clustered microcalcifications in reconstructed digital breast tomosynthesis (DBT) volumes and to perform a preliminary evaluation of the CADe system. Methods: IRB approval and informed consent were obtained in this study. A data set of two-view DBT of 72 breasts containing microcalcification clusters was collected from 72 subjects who were scheduled to undergo breast biopsy. Based on tissue sampling results, 17 cases had breast cancer and 55 were benign. A separate data set of two-view DBT of 38 breasts free of clustered microcalcifications from 38 subjects was collected to independently estimate the number of false-positives (FPs) generated by the CADe system. A radiologist experienced in breast imaging marked the biopsied cluster of microcalcifications with a 3D bounding box using all available clinical and imaging information. A CADe system was designed to detect microcalcification clusters in the reconstructed volume. The system consisted of prescreening, clustering, and false-positive reduction stages. In the prescreening stage, the conspicuity of microcalcification-like objects was increased by an enhancement-modulated 3D calcification response function. An iterative thresholding and 3D object growing method was used to detect cluster seed objects, which were used as potential centers of microcalcification clusters. In the cluster detection stage, microcalcification candidates were identified using a second iterative thresholding procedure, which was applied to the signal-to-noise ratio (SNR) enhanced image voxels with a positive calcification response. Starting with each cluster seed object as the initial cluster center, a dynamic clustering algorithm formed a cluster candidate by including microcalcification candidates within a 3D neighborhood of the cluster seed object that satisfied the clustering criteria. The number, size, and SNR of the microcalcifications in a cluster candidate and the

  13. Brain SPECT analysis by 3D-SSP and clinical features of Parkinson's disease

    International Nuclear Information System (INIS)

    The aim of the present study is to investigate the association of symptoms in Parkinson's disease (PD) with cerebral perfusion on single photon emission computed tomography (SPECT). The clinical features of PD were compared with SPECT images of the brain obtained by three-dimensional stereotactic surface projection (3D-SSP) analysis. Thirty-eight patients who had PD without dementia (17 men and 21 women with a mean age of 68.6±4.7 years) were enrolled in this study. Their symptoms were rated using the unified parkinson's disease rating scale (UPDRS). Within a week, all patients were examined by SPECT with I-123, and reconstructed images were analyzed with 3D-SSP using an image-analysis software, iSSP ver. 3.5. Data on brain surface perfusion extracted by 3D-SSP analysis were compared between the PD patients and the normal control group. The same comparisons were made for subgroups of PD patients with severe symptoms, such as tremor, gait disturbance, bradykinesia, and the UPDRS motor score. Cerebral perfusion was decreased at the anterior cingulate cortex and occipital lobe of the PD patients compared with the normal controls. In the subgroups with severe gait disturbance and severe bradykinesia, additional hypoperfusion was seen at the lateral frontal association and lateral temporal association and the medial frontal gyrus, and by the pixel-by-pixel comparison, perfusion was significantly decreased (p<0.05) at the medial frontal gyrus and anterior cingulate cortex compared with the normal control group. In PD patients, severe gait disturbance and bradykinesia may be correlated with hypoperfusion of the medial aspect of the frontal lobe. This suggests that functional disturbance of the supplementary motor area and other parts of the frontal lobe are involved in the development of gait disturbance and bradykinesia in PD. (author)

  14. The NCOREL computer program for 3D nonlinear supersonic potential flow computations

    Science.gov (United States)

    Siclari, M. J.

    1983-01-01

    An innovative computational technique (NCOREL) was established for the treatment of three dimensional supersonic flows. The method is nonlinear in that it solves the nonconservative finite difference analog of the full potential equation and can predict the formation of supercritical cross flow regions, embedded and bow shocks. The method implicitly computes a conical flow at the apex (R = 0) of a spherical coordinate system and uses a fully implicit marching technique to obtain three dimensional cross flow solutions. This implies that the radial Mach number must remain supersonic. The cross flow solutions are obtained by using type dependent transonic relaxation techniques with the type dependency linked to the character of the cross flow velocity (i.e., subsonic/supersonic). The spherical coordinate system and marching on spherical surfaces is ideally suited to the computation of wing flows at low supersonic Mach numbers due to the elimination of the subsonic axial Mach number problems that exist in other marching codes that utilize Cartesian transverse marching planes.

  15. Analysis of information for cerebrovascular disorders obtained by 3D MR imaging

    Energy Technology Data Exchange (ETDEWEB)

    Yoshikawa, Kohki [Tokyo Univ. (Japan). Inst. of Medical Science; Yoshioka, Naoki; Watanabe, Fumio; Shiono, Takahiro; Sugishita, Morihiro; Umino, Kazunori

    1995-12-01

    Recently, it becomes easy to analyze information obtained by 3D MR imaging due to remarkable progress of fast MR imaging technique and analysis tool. Six patients suffered from aphasia (4 cerebral infarctions and 2 bleedings) were performed 3D MR imaging (3D FLASH-TR/TE/flip angle; 20-50 msec/6-10 msec/20-30 degrees) and their volume information were analyzed by multiple projection reconstruction (MPR), surface rendering 3D reconstruction, and volume rendering 3D reconstruction using Volume Design PRO (Medical Design Co., Ltd.). Four of them were diagnosed as Broca`s aphasia clinically and their lesions could be detected around the cortices of the left inferior frontal gyrus. Another 2 patients were diagnosed as Wernicke`s aphasia and the lesions could be detected around the cortices of the left supramarginal gyrus. This technique for 3D volume analyses would provide quite exact locational information about cerebral cortical lesions. (author).

  16. Comprehensive Aerodynamic Analysis of a 10 MW Wind Turbine Rotor Using 3D CFD

    DEFF Research Database (Denmark)

    Zahle, Frederik; Bak, Christian; Sørensen, Niels N.;

    2014-01-01

    This article describes a comprehensive aerodynamic analysis carried out on the DTU 10 MW Reference Wind Turbine (DTU 10MW RWT), in which 3D CFD simulations were used to analyse the rotor performance and derive airfoil aerodynamic characteristics for use in aero-elastic simulation tools. The 3D CFD...... airfoil data derived using the Azimuthal Averaging Technique (AAT) was compared to airfoil data based on 2D CFD simulations on airfoil sections in combination with an array of 3D-correction engineering models, which indicated that the model by Chaviaropoulos and Hansen was in best agreement with the 3D...... CFD predictions. BEM simulations on the DTU 10MW RWT using the AAT-based airfoil data were carried out and compared to BEM simulations using the original airfoil data and the 3D CFD results, which showed clear improvements, particularly on the inner part of the rotor. Finally, 3D unsteady Detached...

  17. 3D pore-network analysis and permeability estimation of deformation bands hosted in carbonate grainstones.

    Science.gov (United States)

    Zambrano, Miller; Tondi, Emanuele; Mancini, Lucia; Trias, F. Xavier; Arzilli, Fabio; Lanzafame, Gabriele; Aibibula, Nijiati

    2016-04-01

    In porous rocks strain is commonly localized in narrow Deformation Bands (DBs), where the petrophysical properties are significantly modified with respect the pristine rock. As a consequence, DBs could have an important effect on production and development of porous reservoirs representing baffles zones or, in some cases, contribute to reservoir compartmentalization. Taking in consideration that the decrease of permeability within DBs is related to changes in the porous network properties (porosity, connectivity) and the pores morphology (size distribution, specific surface area), an accurate porous network characterization is useful for understanding both the effect of deformation banding on the porous network and their influence upon fluid flow through the deformed rocks. In this work, a 3D characterization of the microstructure and texture of DBs hosted in porous carbonate grainstones was obtained at the Elettra laboratory (Trieste, Italy) by using two different techniques: phase-contrast synchrotron radiation computed microtomography (micro-CT) and microfocus X-ray micro-CT. These techniques are suitable for addressing quantitative analysis of the porous network and implementing Computer Fluid Dynamics (CFD)experiments in porous rocks. Evaluated samples correspond to grainstones highly affected by DBs exposed in San Vito Lo Capo peninsula (Sicily, Italy), Favignana Island (Sicily, Italy) and Majella Mountain (Abruzzo, Italy). For the analysis, the data were segmented in two main components porous and solid phases. The properties of interest are porosity, connectivity, a grain and/or porous textural properties, in order to differentiate host rock and DBs in different zones. Permeability of DB and surrounding host rock were estimated by the implementation of CFD experiments, permeability results are validated by comparing with in situ measurements. In agreement with previous studies, the 3D image analysis and flow simulation indicate that DBs could be constitute

  18. Computational ghost imaging versus imaging laser radar for 3D imaging

    CERN Document Server

    Hardy, Nicholas D

    2012-01-01

    Ghost imaging has been receiving increasing interest for possible use as a remote-sensing system. There has been little comparison, however, between ghost imaging and the imaging laser radars with which it would be competing. Toward that end, this paper presents a performance comparison between a pulsed, computational ghost imager and a pulsed, floodlight-illumination imaging laser radar. Both are considered for range-resolving (3D) imaging of a collection of rough-surfaced objects at standoff ranges in the presence of atmospheric turbulence. Their spatial resolutions and signal-to-noise ratios are evaluated as functions of the system parameters, and these results are used to assess each system's performance trade-offs. Scenarios in which a reflective ghost-imaging system has advantages over a laser radar are identified.

  19. Analysis of the 3d9ns (n = 5, 6), 3d95p, 3d94f and 3d84s4p configurations of five times ionized arsenic (As VI)

    International Nuclear Information System (INIS)

    The spectrum of arsenic was photographed in the 100-1250 A region on grazing and normal incidence spectrographs. The spectrum of As VI was extended. Seven out of eight levels of the 3d95s and 6s configurations, 12 out of 12 levels of the 3d95p configuration, 13 out of 20 levels of the 3d94f configuration and 35 levels belonging to the 3d94s4p configuration have been established. Least-Square-Fitted parametric calculations involving configuration interactions both in even and odd parity systems were carried out to adequately interpret the spectrum. One hundred and thirty-two additional lines were classified in the As VI spectrum. A new value of the ionization limit was obtained. Thus, the 3d92D5/2 ground level in As VII lies 977500 cm-1 (121.17 eV) above the As VI ground state. (orig.)

  20. A 3D computer-aided design system applied to diagnosis and treatment planning in orthodontics and orthognathic surgery.

    Science.gov (United States)

    Motohashi, N; Kuroda, T

    1999-06-01

    The purpose of this article is to describe a newly developed 3D computer-aided design (CAD) system for the diagnostic set-up of casts in orthodontic diagnosis and treatment planning, and its preliminary clinical applications. The system comprises a measuring unit which obtains 3D information from the dental model using laser scanning, and a personal computer to generate the 3D graphics. When measuring the 3D shape of the model, to minimize blind sectors, the model is scanned from two different directions with the slit-ray laser beam by rotating the mounting angle of the model on the measuring device. For computed simulation of tooth movement, the representative planes, defined by the anatomical reference points, are formed for each individual tooth and are arranged along a guideline descriptive of the individual arch form. Subsequently, the 3D shape is imparted to each of the teeth arranged on the representative plane to form an arrangement of the 3D profile. When necessary, orthognathic surgery can be simulated by moving the mandibular dental arch three-dimensionally to establish the optimum occlusal relationship. Compared with hand-made set-up models, the computed diagnostic cast has advantages such as high-speed processing and quantitative evaluation on the amount of 3D movement of the individual tooth relative to the craniofacial plane. Trial clinical applications demonstrated that the use of this system facilitated the otherwise complicated and time-consuming mock surgery for treatment planning in orthognathic surgery.

  1. 3D Quantification of Mandibular Asymmetry through Cone Beam Computed Tomography

    Science.gov (United States)

    Cevidanes, Lucia H.S.; Alhadidi, Abeer; Paniagua, Beatriz; Styner, Martin; Ludlow, John; Mol, Andre; Turvey, Timothy; Proffit, William R.; Rossouw, Paul Emile

    2011-01-01

    Objective To determine if 3D shape analysis precisely diagnoses right and left differences in asymmetry patients Study Design Cone-beam CT data was acquired pretreatment from 20 patients with mandibular asymmetry. 3D shape analysis was used to localize and quantify the extent of virtually simulated asymmetry. Two approaches were used: (1) mirroring on the midsagittal plane determined from landmarks and (2) mirroring on an arbitrary plane, then registering on the cranial base of the original image. The validation presented in this study used simulated data and has been applied to three clinical cases. Results For mirroring on the midsagittal plane there was a >99% probability that the difference between measured and simulated asymmetry was less than 0.5 mm. For mirroring with cranial base registration, there was a >84% probability of differences less than 0.5 mm. Conclusions Mandibular asymmetry can be precisely quantified with both mirroring methods. Cranial base registration has the potential to be used for patients with trauma situations or when key landmarks are unreliable or absent. PMID:21497527

  2. Analysis of 3D strain in the human medial meniscus.

    Science.gov (United States)

    Kolaczek, S; Hewison, C; Caterine, S; Ragbar, M X; Getgood, A; Gordon, K D

    2016-10-01

    This study presents a method to evaluate three-dimensional strain in meniscal tissue using medical imaging. Strain is calculated by tracking small teflon markers implanted within the meniscal tissue using computed tomography imaging. The results are presented for strains in the middle and posterior third of the medial menisci of 10 human cadaveric knees, under simulated physiologically relevant loading. In the middle position, an average compressive strain of 3.4% was found in the medial-lateral direction, and average tensile strains of 1.4% and 3.5% were found in the anterior-posterior and superior-inferior directions respectively at 5° of knee flexion with an applied load of 1× body weight. In the posterior position, under the same conditions, average compressive strains of 2.2% and 6.3% were found in the medial-lateral and superior-inferior directions respectively, and an average tensile strain of 3.8% was found in the anterior-posterior direction. No statistically significant difference between strain in the middle or posterior of the meniscus or between the global strains is uncovered. PMID:27484043

  3. Meshless deformable models for 3D cardiac motion and strain analysis from tagged MRI.

    Science.gov (United States)

    Wang, Xiaoxu; Chen, Ting; Zhang, Shaoting; Schaerer, Joël; Qian, Zhen; Huh, Suejung; Metaxas, Dimitris; Axel, Leon

    2015-01-01

    Tagged magnetic resonance imaging (TMRI) provides a direct and noninvasive way to visualize the in-wall deformation of the myocardium. Due to the through-plane motion, the tracking of 3D trajectories of the material points and the computation of 3D strain field call for the necessity of building 3D cardiac deformable models. The intersections of three stacks of orthogonal tagging planes are material points in the myocardium. With these intersections as control points, 3D motion can be reconstructed with a novel meshless deformable model (MDM). Volumetric MDMs describe an object as point cloud inside the object boundary and the coordinate of each point can be written in parametric functions. A generic heart mesh is registered on the TMRI with polar decomposition. A 3D MDM is generated and deformed with MR image tagging lines. Volumetric MDMs are deformed by calculating the dynamics function and minimizing the local Laplacian coordinates. The similarity transformation of each point is computed by assuming its neighboring points are making the same transformation. The deformation is computed iteratively until the control points match the target positions in the consecutive image frame. The 3D strain field is computed from the 3D displacement field with moving least squares. We demonstrate that MDMs outperformed the finite element method and the spline method with a numerical phantom. Meshless deformable models can track the trajectory of any material point in the myocardium and compute the 3D strain field of any particular area. The experimental results on in vivo healthy and patient heart MRI show that the MDM can fully recover the myocardium motion in three dimensions. PMID:25157446

  4. Enabling 3D-Liver Perfusion Mapping from MR-DCE Imaging Using Distributed Computing

    Directory of Open Access Journals (Sweden)

    Benjamin Leporq

    2013-01-01

    Full Text Available An MR acquisition protocol and a processing method using distributed computing on the European Grid Infrastructure (EGI to allow 3D liver perfusion parametric mapping after Magnetic Resonance Dynamic Contrast Enhanced (MR-DCE imaging are presented. Seven patients (one healthy control and six with chronic liver diseases were prospectively enrolled after liver biopsy. MR-dynamic acquisition was continuously performed in free-breathing during two minutes after simultaneous intravascular contrast agent (MS-325 blood pool agent injection. Hepatic capillary system was modeled by a 3-parameters one-compartment pharmacokinetic model. The processing step was parallelized and executed on the EGI. It was modeled and implemented as a grid workflow using the Gwendia language and the MOTEUR workflow engine. Results showed good reproducibility in repeated processing on the grid. The results obtained from the grid were well correlated with ROI-based reference method ran locally on a personal computer. The speed-up range was 71 to 242 with an average value of 126. In conclusion, distributed computing applied to perfusion mapping brings significant speed-up to quantification step to be used for further clinical studies in a research context. Accuracy would be improved with higher image SNR accessible on the latest 3T MR systems available today.

  5. FURN3D: A computer code for radiative heat transfer in pulverized coal furnaces

    Energy Technology Data Exchange (ETDEWEB)

    Ahluwalia, R.K.; Im, K.H.

    1992-08-01

    A computer code FURN3D has been developed for assessing the impact of burning different coals on heat absorption pattern in pulverized coal furnaces. The code is unique in its ability to conduct detailed spectral calculations of radiation transport in furnaces fully accounting for the size distributions of char, soot and ash particles, ash content, and ash composition. The code uses a hybrid technique of solving the three-dimensional radiation transport equation for absorbing, emitting and anisotropically scattering media. The technique achieves an optimal mix of computational speed and accuracy by combining the discrete ordinate method (S{sub 4}), modified differential approximation (MDA) and P, approximation in different range of optical thicknesses. The code uses spectroscopic data for estimating the absorption coefficients of participating gases C0{sub 2}, H{sub 2}0 and CO. It invokes Mie theory for determining the extinction and scattering coefficients of combustion particulates. The optical constants of char, soot and ash are obtained from dispersion relations derived from reflectivity, transmissivity and extinction measurements. A control-volume formulation is adopted for determining the temperature field inside the furnace. A simple char burnout model is employed for estimating heat release and evolution of particle size distribution. The code is written in Fortran 77, has modular form, and is machine-independent. The computer memory required by the code depends upon the number of grid points specified and whether the transport calculations are performed on spectral or gray basis.

  6. FURN3D: A computer code for radiative heat transfer in pulverized coal furnaces

    Energy Technology Data Exchange (ETDEWEB)

    Ahluwalia, R.K.; Im, K.H.

    1992-08-01

    A computer code FURN3D has been developed for assessing the impact of burning different coals on heat absorption pattern in pulverized coal furnaces. The code is unique in its ability to conduct detailed spectral calculations of radiation transport in furnaces fully accounting for the size distributions of char, soot and ash particles, ash content, and ash composition. The code uses a hybrid technique of solving the three-dimensional radiation transport equation for absorbing, emitting and anisotropically scattering media. The technique achieves an optimal mix of computational speed and accuracy by combining the discrete ordinate method (S[sub 4]), modified differential approximation (MDA) and P, approximation in different range of optical thicknesses. The code uses spectroscopic data for estimating the absorption coefficients of participating gases C0[sub 2], H[sub 2]0 and CO. It invokes Mie theory for determining the extinction and scattering coefficients of combustion particulates. The optical constants of char, soot and ash are obtained from dispersion relations derived from reflectivity, transmissivity and extinction measurements. A control-volume formulation is adopted for determining the temperature field inside the furnace. A simple char burnout model is employed for estimating heat release and evolution of particle size distribution. The code is written in Fortran 77, has modular form, and is machine-independent. The computer memory required by the code depends upon the number of grid points specified and whether the transport calculations are performed on spectral or gray basis.

  7. CAD, 3D modeling, engineering analysis, and prototype experimentation industrial and research applications

    CERN Document Server

    Zheng Li, Jeremy

    2015-01-01

    This succinct book focuses on computer aided design (CAD), 3-D modeling, and engineering analysis and the ways they can be applied effectively in research and industrial sectors including aerospace, defense, automotive, and consumer products. These efficient tools, deployed for R&D in the laboratory and the field, perform efficiently three-dimensional modeling of finished products, render complex geometrical product designs, facilitate structural analysis and optimal product design, produce graphic and engineering drawings, and generate production documentation. Written with an eye toward green energy installations and novel manufacturing facilities, this concise volume enables scientific researchers and engineering professionals to learn design techniques, control existing and complex issues, proficiently use CAD tools, visualize technical fundamentals, and gain analytic and technical skills. This book also: ·       Equips practitioners and researchers to handle powerful tools for engineering desi...

  8. Stereo Scene Flow for 3D Motion Analysis

    CERN Document Server

    Wedel, Andreas

    2011-01-01

    This book presents methods for estimating optical flow and scene flow motion with high accuracy, focusing on the practical application of these methods in camera-based driver assistance systems. Clearly and logically structured, the book builds from basic themes to more advanced concepts, culminating in the development of a novel, accurate and robust optic flow method. Features: reviews the major advances in motion estimation and motion analysis, and the latest progress of dense optical flow algorithms; investigates the use of residual images for optical flow; examines methods for deriving mot

  9. Multiscale 3D shape analysis using spherical wavelets.

    Science.gov (United States)

    Nain, Delphine; Haker, Steven; Bobick, Aaron; Tannenbaum, Allen R

    2005-01-01

    Shape priors attempt to represent biological variations within a population. When variations are global, Principal Component Analysis (PCA) can be used to learn major modes of variation, even from a limited training set. However, when significant local variations exist, PCA typically cannot represent such variations from a small training set. To address this issue, we present a novel algorithm that learns shape variations from data at multiple scales and locations using spherical wavelets and spectral graph partitioning. Our results show that when the training set is small, our algorithm significantly improves the approximation of shapes in a testing set over PCA, which tends to oversmooth data. PMID:16685992

  10. Limit Analysis of 3D Reinforced Concrete Beam Elements

    DEFF Research Database (Denmark)

    Larsen, Kasper P.; Nielsen, Leif Otto; Poulsen, Peter Noe

    2012-01-01

    A new finite-element framework for lower-bound limit analysis of reinforced concrete beams, subjected to loading in three dimensions, is presented. The method circumvents the need for a direct formulation of a complex section-force-based yield criterion by creating a discrete representation...... Coulomb criterion is applied to the concrete stresses. The modified Coulomb criterion is approximated using second-order cone programming for improved performance over implementations using semidefinite programming. The element is verified by comparing the numerical results with analytical solutions....

  11. 3D Animation Essentials

    CERN Document Server

    Beane, Andy

    2012-01-01

    The essential fundamentals of 3D animation for aspiring 3D artists 3D is everywhere--video games, movie and television special effects, mobile devices, etc. Many aspiring artists and animators have grown up with 3D and computers, and naturally gravitate to this field as their area of interest. Bringing a blend of studio and classroom experience to offer you thorough coverage of the 3D animation industry, this must-have book shows you what it takes to create compelling and realistic 3D imagery. Serves as the first step to understanding the language of 3D and computer graphics (CG)Covers 3D anim

  12. Sub aquatic 3D visualization and temporal analysis utilizing ArcGIS online and 3D applications

    Science.gov (United States)

    We used 3D Visualization tools to illustrate some complex water quality data we’ve been collecting in the Great Lakes. These data include continuous tow data collected from our research vessel the Lake Explorer II, and continuous water quality data collected from an autono...

  13. A Fast Full Tensor Gravity computation algorithm for High Resolution 3D Geologic Interpretations

    Science.gov (United States)

    Jayaram, V.; Crain, K.; Keller, G. R.

    2011-12-01

    We present an algorithm to rapidly calculate the vertical gravity and full tensor gravity (FTG) values due to a 3-D geologic model. This algorithm can be implemented on single, multi-core CPU and graphical processing units (GPU) architectures. Our technique is based on the line element approximation with a constant density within each grid cell. This type of parameterization is well suited for high-resolution elevation datasets with grid size typically in the range of 1m to 30m. The large high-resolution data grids in our studies employ a pre-filtered mipmap pyramid type representation for the grid data known as the Geometry clipmap. The clipmap was first introduced by Microsoft Research in 2004 to do fly-through terrain visualization. This method caches nested rectangular extents of down-sampled data layers in the pyramid to create view-dependent calculation scheme. Together with the simple grid structure, this allows the gravity to be computed conveniently on-the-fly, or stored in a highly compressed format. Neither of these capabilities has previously been available. Our approach can perform rapid calculations on large topographies including crustal-scale models derived from complex geologic interpretations. For example, we used a 1KM Sphere model consisting of 105000 cells at 10m resolution with 100000 gravity stations. The line element approach took less than 90 seconds to compute the FTG and vertical gravity on an Intel Core i7 CPU at 3.07 GHz utilizing just its single core. Also, unlike traditional gravity computational algorithms, the line-element approach can calculate gravity effects at locations interior or exterior to the model. The only condition that must be met is the observation point cannot be located directly above the line element. Therefore, we perform a location test and then apply appropriate formulation to those data points. We will present and compare the computational performance of the traditional prism method versus the line element

  14. Solar Burst Analysis with 3D Loop Models

    CERN Document Server

    Costa, Joaquim E R; Pinto, Tereza S N; Melnikov, Victor F

    2013-01-01

    A sample of Nobeyama flares was selected and analyzed using loop model for important flare parameters. The model for the flaring region consists of a three dimensional dipolar magnetic field, and spatial distributions of non-thermal electrons. We constructed a database by calculating the flare microwave emission for a wide range of these parameters. Out of this database with more than 5,000 cases we extracted general flare properties by comparing the observed and calculated microwave spectra. The analysis of NoRP data was mostly based in the center-to-limb variation of the flare properties with looptop and footpoint electron distributions and for NoRH maps on the resultant distribution of emission. One important aspect of this work is the comparison of the analysis of a flare using an inhomogeneous source model and a simplistic homogeneous source model. Our results show clearly that the homogeneous source hypothesis is not appropriate to describe the possible flare geometry and its use can easily produce misl...

  15. Segmentation, Reconstruction, and Analysis of Blood Thrombus Formation in 3D 2-Photon Microscopy Images

    Directory of Open Access Journals (Sweden)

    Xu Zhiliang

    2010-01-01

    Full Text Available We study the problem of segmenting, reconstructing, and analyzing the structure growth of thrombi (clots in blood vessels in vivo based on 2-photon microscopic image data. First, we develop an algorithm for segmenting clots in 3D microscopic images based on density-based clustering and methods for dealing with imaging artifacts. Next, we apply the union-of-balls (or alpha-shape algorithm to reconstruct the boundary of clots in 3D. Finally, we perform experimental studies and analysis on the reconstructed clots and obtain quantitative data of thrombus growth and structures. We conduct experiments on laser-induced injuries in vessels of two types of mice (the wild type and the type with low levels of coagulation factor VII and analyze and compare the developing clot structures based on their reconstructed clots from image data. The results we obtain are of biomedical significance. Our quantitative analysis of the clot composition leads to better understanding of the thrombus development, and is valuable to the modeling and verification of computational simulation of thrombogenesis.

  16. A 3D endoscopy reconstruction as a saliency map for analysis of polyp shapes

    Science.gov (United States)

    Ruano, Josue; Martínez, Fabio; Gómez, Martín.; Romero, Eduardo

    2015-01-01

    A first diagnosis of colorectal cancer is performed by examination of polyp shape and appearance during an endoscopy routine procedure. However, the video-endoscopy is highly noisy because exacerbated physiological conditions like increased motility or secretion may limit the visual analysis of lesions. In this work a 3D reconstruction of the digestive tract is proposed, facilitating the polyp shape evaluation by highlighting its surface geometry and allowing an analysis from different perspectives. The method starts by a spatio-temporal map, constructed to group the different regions of the tract by their similar dynamic patterns during the sequence. Then, such map was convolved with a second derivative of a Gaussian kernel that emulates the camera distortion and allows to highlight the polyp surface. The position initialization in each frame of the kernel was computed from expert manual delineation and propagated along the sequence based on. Results show reliable reconstructions, with a salient 3D polyp structure that can then be better observed.

  17. Galerkin Boundary Integral Analysis for the 3D Helmholtz Equation

    Energy Technology Data Exchange (ETDEWEB)

    Swager, Melissa [Emporia State University; Gray, Leonard J [ORNL; Nintcheu Fata, Sylvain [ORNL

    2010-01-01

    A linear element Galerkin boundary integral analysis for the three-dimensional Helmholtz equation is presented. The emphasis is on solving acoustic scattering by an open (crack) surface, and to this end both a dual equation formulation and a symmetric hypersingular formulation have been developed. All singular integrals are defined and evaluated via a boundary limit process, facilitating the evaluation of the (finite) hypersingular Galerkin integral. This limit process is also the basis for the algorithm for post-processing of the surface gradient. The analytic integrations required by the limit process are carried out by employing a Taylor series expansion for the exponential factor in the Helmholtz fundamental solutions. For the open surface, the implementations are validated by comparing the numerical results obtained by using the two different methods.

  18. Time-Domain Analysis for 3-D Moored Systems

    Institute of Scientific and Technical Information of China (English)

    肖越; 王言英

    2004-01-01

    In the paper, a comprehensive numerical study on the moored system is performed in time domain. The moored system, which is composed of the floating body sub-system and the mooring line sub-system, is calculated as a whole system by coupling. A time-domain method is applied to the analysis of the mooring line sub-system, and at the same time, an indirect time-domain method translated from frequency-domain to time-domain is developed to calculate the floating body sub-system. In the end, an FPSO vessel is calculated as a numerical example by the present method. A comparison of the result of the model test and that of the numerical method indicates that the present method is exact and effective.

  19. 3D nuclear track analysis by digital holographic microscopy

    Energy Technology Data Exchange (ETDEWEB)

    Palacios, F. [Universidad de Oriente, Santiago de Cuba (Cuba); Palacios Fernandez, D., E-mail: danpalacios@cantv.ne [Universidad Simon Bolivar, P.O. 89000, Caracas 1080 (Venezuela, Bolivarian Republic of); Ricardo, J.; Palacios, G.F. [Universidad de Oriente, Santiago de Cuba (Cuba); Sajo-Bohus, L. [Universidad Simon Bolivar, P.O. 89000, Caracas 1080 (Venezuela, Bolivarian Republic of); Goncalves, E. [Polytechnical School, Sao Paulo University (USP) (Brazil); Valin, J.L. [Instituto Politecnico Superior ' Jose Antonio Echeverria' , Habana (Cuba); Monroy, F.A. [Universidad Nacional de Colombia, Sede Bogota (Colombia)

    2011-01-15

    A new method, based on Digital Holographic Microscopy (DHM), to visualize and to analyze etched tracks in SSNTD has been developed. The proposed method is based on the possibility of the digital holography to perform whole reconstruction of the recorded wave front, so that phase and intensity distribution at a plane located between the object and recording plane and along the reconstructed image of the object can be determined. In a DHM system, the back focal plane of the lens can be reconstructed so that complex amplitudes of the Fraunhofer diffraction of light distribution across the object can be known. With the knowledge and manipulation of the components of this plane is possible to design different methods of image analysis. In this paper, the DHM method was applied to determine the track parameters in CR-39 detectors, showing that most of studies carried out with Confocal Microscopy and Atomic Force Microscopy could be also done, with the sufficient exactitude and precision, but in a simpler and more economic way. The developed microholographic method provides a new alternative procedure that overcomes the current techniques at least in technological simplicity.

  20. 3D nuclear track analysis by digital holographic microscopy

    International Nuclear Information System (INIS)

    A new method, based on Digital Holographic Microscopy (DHM), to visualize and to analyze etched tracks in SSNTD has been developed. The proposed method is based on the possibility of the digital holography to perform whole reconstruction of the recorded wave front, so that phase and intensity distribution at a plane located between the object and recording plane and along the reconstructed image of the object can be determined. In a DHM system, the back focal plane of the lens can be reconstructed so that complex amplitudes of the Fraunhofer diffraction of light distribution across the object can be known. With the knowledge and manipulation of the components of this plane is possible to design different methods of image analysis. In this paper, the DHM method was applied to determine the track parameters in CR-39 detectors, showing that most of studies carried out with Confocal Microscopy and Atomic Force Microscopy could be also done, with the sufficient exactitude and precision, but in a simpler and more economic way. The developed microholographic method provides a new alternative procedure that overcomes the current techniques at least in technological simplicity.

  1. Global stability analysis of turbulent 3D wakes

    Science.gov (United States)

    Rigas, Georgios; Sipp, Denis; Juniper, Matthew

    2015-11-01

    At low Reynolds numbers, corresponding to laminar and transitional regimes, hydrodynamic stability theory has aided the understanding of the dynamics of bluff body wake-flows and the application of effective control strategies. However, flows of fundamental importance to many industries, in particular the transport industry, involve high Reynolds numbers and turbulent wakes. Despite their turbulence, such wake flows exhibit organisation which is manifested as coherent structures. Recent work has shown that the turbulent coherent structures retain the shape of the symmetry-breaking laminar instabilities and only those manifest as large-scale structures in the near wake (Rigas et al., JFM vol. 750:R5 2014, JFM vol. 778:R2 2015). Based on the findings of the persistence of the laminar instabilities at high Reynolds numbers, we investigate the global stability characteristics of a turbulent wake generated behind a bluff three-dimensional axisymmetric body. We perform a linear global stability analysis on the experimentally obtained mean flow and we recover the dynamic characteristics and spatial structure of the coherent structures, which are linked to the transitional instabilities. A detailed comparison of the predictions with the experimental measurements will be provided.

  2. Detailed 3-D nuclear analysis of ITER blanket modules

    Energy Technology Data Exchange (ETDEWEB)

    Bohm, T.D., E-mail: tdbohm@wisc.edu [University of Wisconsin-Madison, Madison, WI (United States); Sawan, M.E.; Marriott, E.P.; Wilson, P.P.H. [University of Wisconsin-Madison, Madison, WI (United States); Ulrickson, M.; Bullock, J. [Sandia National Laboratories, Albuquerque, NM (United States)

    2014-10-15

    In ITER, the blanket modules (BM) are arranged around the plasma to provide thermal and nuclear shielding for the vacuum vessel (VV), magnets, and other components. As a part of the BM design process, nuclear analysis is required to determine the level of nuclear heating, helium production, and radiation damage in the BM. Additionally, nuclear heating in the VV is also important for assessing the BM design. We used the CAD based DAG-MCNP5 transport code to analyze detailed models inserted into a 40-degree partially homogenized ITER global model. The regions analyzed include BM01, the neutral beam injection (NB) region, and the upper port region. For BM01, the results show that He production meets the limit necessary for re-welding, and the VV heating behind BM01 is acceptable. For the NBI region, the VV nuclear heating behind the NB region exceeds the design limit by a factor of two. For the upper port region, the nuclear heating of the VV exceeds the design limit by up to 20%. The results presented in this work are being used to modify the BM design in the cases where limits are exceeded.

  3. Compatibility analysis of 3D printer resin for biological applications

    KAUST Repository

    Sivashankar, Shilpa

    2016-08-30

    The salient features of microfluidics such as reduced cost, handling small sample and reagent volumes and less time required to fabricate the devices has inspired the present work. The incompatibility of three-dimensional printer resins in their native form and the method to improve their compatibility to many biological processes via surface modification are reported. The compatibility of the material to build microfluidic devices was evaluated in three different ways: (i) determining if the ultraviolet (UV) cured resin inhibits the polymerase chain reaction (PCR), i.e. testing devices for PCR compatibility; (ii) observing agglutination complex formed on the surface of the UV cured resin when anti-C-reactive protein (CRP) antibodies and CRP proteins were allowed to agglutinate; and (iii) by culturing human embryonic kidney cell line cells and testing for its attachment and viability. It is shown that only a few among four in its native form could be used for fabrication of microchannels and that had the least effect on biological molecules that could be used for PCR and protein interactions and cells, whereas the others were used after treating the surface. Importance in building lab-on-chip/micrototal analysis systems and organ-on-chip devices is found.

  4. Simulation of a simple RCCS experiment with RELAP5-3D system code and computational fluid dynamics computer program

    International Nuclear Information System (INIS)

    A small scale experimental facility was designed to study the thermal hydraulic phenomena in the Reactor Cavity Cooling System (RCCS). The facility was scaled down from the full scale RCCS system by applying scaling laws. A set of RELAP5-3D simulations were performed to confirm the scaling calculations, and to refine and optimize the facility's configuration, instrumentation selection, and layout. Computational Fluid Dynamics (CFD) calculations using StarCCM+ were performed in order to study the flow patterns and two-phase water behavior in selected locations of the facility where expected complex flow structure occurs. (author)

  5. A Shell/3D Modeling Technique for the Analysis of Delaminated Composite Laminates

    Science.gov (United States)

    Krueger, Ronald; OBrien, T. Kevin

    2000-01-01

    A shell/3D modeling technique was developed for which a local solid finite element model is used only in the immediate vicinity of the delamination front. The goal was to combine the accuracy of the full three-dimensional solution with the computational efficiency of a shell finite element model. Multi-point constraints provided a kinematically compatible interface between the local 3D model and the global structural model which has been meshed with shell finite elements. Double Cantilever Beam, End Notched Flexure, and Single Leg Bending specimens were analyzed first using full 3D finite element models to obtain reference solutions. Mixed mode strain energy release rate distributions were computed using the virtual crack closure technique. The analyses were repeated using the shell/3D technique to study the feasibility for pure mode I, mode II and mixed mode I/II cases. Specimens with a unidirectional layup and with a multidirectional layup were simulated. For a local 3D model, extending to a minimum of about three specimen thicknesses on either side of the delamination front, the results were in good agreement with mixed mode strain energy release rates obtained from computations where the entire specimen had been modeled with solid elements. For large built-up composite structures the shell/3D modeling technique offers a great potential for reducing the model size, since only a relatively small section in the vicinity of the delamination front needs to be modeled with solid elements.

  6. 3-D Computational Modelling of Oblique Continental Collision near South Island, New Zealand

    Science.gov (United States)

    Karatun, L.; Pysklywec, R. N.

    2015-12-01

    The research explores the highly oblique continental convergence at the South Island of New Zealand, considering the fundamental geodynamic mechanisms of sub-crustal lithospheric deformation during the orogenesis. In addition to the high velocity of along-strike plate motion, the oppositely verging subduction zones bounding the collision make the problem inherently three-dimensional. To study such factors during orogenesis, we conduct 3D computational modelling and present the results of a series of new experiments configured for the oblique South Island collision. The geodynamic modelling uses ASPECT - a robust highly-scalable and extendable geodynamic code featuring adaptive mesh refinement and complex rheologies. The model domain is defined by a box with prescribed velocities on the left and right faces with varied ratio of convergent versus strike-slip components, periodic boundary conditions for the front and back faces, free surface on top, and free slip at the bottom. Two different rheology types are used: brittle (pressure-, strain rate-, and material strength-dependent) for crust and visco-plastic (temperature-, pressure- and strain rate-dependent) for mantle. The obtained results provide insight into the behaviour of the lithosphere under the situation of young oblique convergence. We focus on the development of the mantle lithosphere, considering how the morphology of the sub-crustal orogenic root evolves during the convergent/strike-slip plate motions. The numerical experiments explore the dependence of this process on such factors as ratio of convergent versus strike-slip motion at the plate boundary, and rheological parameters of crust and mantle. The behaviour of the crust is also tracked to determine how the deep 3D tectonics may manifest at the surface.

  7. Multislice computed tomography angiography in the diagnosis of cardiovascular disease: 3D visualizations

    Institute of Scientific and Technical Information of China (English)

    Zhonghua Sun

    2011-01-01

    Multislice computed tomography (CT) has been widely used in clinical practice for the diagnosis of cardiovascular disease due to its reduced invasiveness and high spatial and temporal resolution.As a reliable alternative to conventional angiography,multislice CT angiography has been recognized as the method of choice for detecting and diagnosing head and neck vascular disease,abdominal aortic aneurysm,aortic dissection,and pulmonary embolism.In patients with suspected coronary artery disease,although invasive coronary angiography still remains as the gold standard technique,multislice CT angiography demonstrates high diagnostic accuracy; in selected patients,it is considered as the first-line technique.The imaging diagnosis of cardiovascular disease is based on a combination of two-dimensional (2D) and three-dimensional (3D) visualization tools to enhance the diagnostic value.This is facilitated by reconstructed visualizations which provide additional information about the extent of the disease,an accurate assessment of the spatial relationship between normal structures and pathological changes,and pre-operative planning and post-procedure follow-up.The aim of the present article is to present an overview of the diagnostic performance of various 2D and 3D CT visualizations in cardiovascular disease,including multiplanar reformation,maximum intensity projection,volume rendering,and virtual intravascular endoscopy.The recognition of the potential value of these visualizations will assist clinicians in efficiently using the muitislice CT imaging modality for the diagnostic management of patients with cardiovascular disease.

  8. Potential hazards of viewing 3-D stereoscopic television, cinema and computer games: a review.

    Science.gov (United States)

    Howarth, Peter A

    2011-03-01

    The visual stimulus provided by a 3-D stereoscopic display differs from that of the real world because the image provided to each eye is produced on a flat surface. The distance from the screen to the eye remains fixed, providing a single focal distance, but the introduction of disparity between the images allows objects to be located geometrically in front of, or behind, the screen. Unlike in the real world, the stimulus to accommodation and the stimulus to convergence do not match. Although this mismatch is used positively in some forms of Orthoptic treatment, a number of authors have suggested that it could negatively lead to the development of asthenopic symptoms. From knowledge of the zone of clear, comfortable, single binocular vision one can predict that, for people with normal binocular vision, adverse symptoms will not be present if the discrepancy is small, but are likely if it is large, and that what constitutes 'large' and 'small' are idiosyncratic to the individual. The accommodation-convergence mismatch is not, however, the only difference between the natural and the artificial stimuli. In the former case, an object located in front of, or behind, a fixated object will not only be perceived as double if the images fall outside Panum's fusional areas, but it will also be defocused and blurred. In the latter case, however, it is usual for the producers of cinema, TV or computer game content to provide an image that is in focus over the whole of the display, and as a consequence diplopic images will be sharply in focus. The size of Panum's fusional area is spatial frequency-dependent, and because of this the high spatial frequencies present in the diplopic 3-D image will provide a different stimulus to the fusion system from that found naturally. PMID:21309798

  9. Potential hazards of viewing 3-D stereoscopic television, cinema and computer games: a review.

    Science.gov (United States)

    Howarth, Peter A

    2011-03-01

    The visual stimulus provided by a 3-D stereoscopic display differs from that of the real world because the image provided to each eye is produced on a flat surface. The distance from the screen to the eye remains fixed, providing a single focal distance, but the introduction of disparity between the images allows objects to be located geometrically in front of, or behind, the screen. Unlike in the real world, the stimulus to accommodation and the stimulus to convergence do not match. Although this mismatch is used positively in some forms of Orthoptic treatment, a number of authors have suggested that it could negatively lead to the development of asthenopic symptoms. From knowledge of the zone of clear, comfortable, single binocular vision one can predict that, for people with normal binocular vision, adverse symptoms will not be present if the discrepancy is small, but are likely if it is large, and that what constitutes 'large' and 'small' are idiosyncratic to the individual. The accommodation-convergence mismatch is not, however, the only difference between the natural and the artificial stimuli. In the former case, an object located in front of, or behind, a fixated object will not only be perceived as double if the images fall outside Panum's fusional areas, but it will also be defocused and blurred. In the latter case, however, it is usual for the producers of cinema, TV or computer game content to provide an image that is in focus over the whole of the display, and as a consequence diplopic images will be sharply in focus. The size of Panum's fusional area is spatial frequency-dependent, and because of this the high spatial frequencies present in the diplopic 3-D image will provide a different stimulus to the fusion system from that found naturally.

  10. Depth migration and de-migration for 3-D migration velocity analysis; Migration profondeur et demigration pour l'analyse de vitesse de migration 3D

    Energy Technology Data Exchange (ETDEWEB)

    Assouline, F.

    2001-07-01

    for the application of migration velocity analysis. We are interested in particular in an important problem: the influence of irregularities in seismic acquisition on the quality of the depth migrated images. Indeed, 3-D seismic acquisitions show irregularities which are characterized by offset variations as well as a non uniform spatial sampling of the data. To overcome the first kind of irregularities, we propose to introduce the concept of migration by offset class in which are migrated all seismic traces that belong to a given offset class, and we show that such a migration relies on a sound theoretical basis whenever the offset varies smoothly with the midpoint coordinate. These theoretical considerations are validated experimentally: offset classes constructed so that the offset varies slowly with the midpoint coordinate allow to obtain the required imaging quality for migration velocity analysis. The influence, on the quality of the migrated images, of a non uniform spatial sampling of the data is, as for it, much more important than the one linked to offset variations: the computation of the superposition of migrated images associated with each midpoint requires the use of a genuine numerical integration formula. We study quadrature formulas based on polynomial interpolation procedures of the function to be integrated. We recommend to use the Hermite interpolation based numerical integration formula if we are primarily interested in amplitude variations in the case of gently dipping layers, and the Lagrange interpolation based numerical integration formula for the imaging of structures involving some complexity. Moreover, the implementation of these schemes of interpolation consists of a preprocessing of the data and does not really increase the CPU time required for running the migration itself. Of course, these approaches require that the distribution of midpoints is dense enough so as to take correctly into account the variations of the function to be

  11. Parallel computing simulation of electrical excitation and conduction in the 3D human heart.

    Science.gov (United States)

    Di Yu; Dongping Du; Hui Yang; Yicheng Tu

    2014-01-01

    A correctly beating heart is important to ensure adequate circulation of blood throughout the body. Normal heart rhythm is produced by the orchestrated conduction of electrical signals throughout the heart. Cardiac electrical activity is the resulted function of a series of complex biochemical-mechanical reactions, which involves transportation and bio-distribution of ionic flows through a variety of biological ion channels. Cardiac arrhythmias are caused by the direct alteration of ion channel activity that results in changes in the AP waveform. In this work, we developed a whole-heart simulation model with the use of massive parallel computing with GPGPU and OpenGL. The simulation algorithm was implemented under several different versions for the purpose of comparisons, including one conventional CPU version and two GPU versions based on Nvidia CUDA platform. OpenGL was utilized for the visualization / interaction platform because it is open source, light weight and universally supported by various operating systems. The experimental results show that the GPU-based simulation outperforms the conventional CPU-based approach and significantly improves the speed of simulation. By adopting modern computer architecture, this present investigation enables real-time simulation and visualization of electrical excitation and conduction in the large and complicated 3D geometry of a real-world human heart.

  12. Computational Finite Element Software Assisted Development of a 3D Inductively Coupled Power Transfer System

    Directory of Open Access Journals (Sweden)

    Pratik Raval

    2014-02-01

    Full Text Available To date inductively coupled power transfer (ICPT systems have already found many practical applications including battery charging pads. In fact, current charging platforms tend to largely support only one- or two-dimensional planar movement in load. This paper proposes a new concept of extending the aspect ratios of the operating power transfer volume of ICPT systems to support arbitrary three dimensional load movements with respect to the primary coils. This is done by use of modern finite element method analysis software to propose the primary and secondary magnetic structures of such an ICPT system. Firstly, two primary magnetic structures are proposed based on contrasting modes of operation and different field directions. This includes a single-phase and multi-phase current model. Next, a secondary magnetic structure is customized to be compatible with both primary structures. The resulting system is shown to produce a 3D power transfer volume for battery cell charging applications.

  13. SAFE-3D analysis of a piezoelectric transducer to excite guided waves in a rail web

    Science.gov (United States)

    Ramatlo, Dineo A.; Long, Craig S.; Loveday, Philip W.; Wilke, Daniel N.

    2016-02-01

    Our existing Ultrasonic Broken Rail Detection system detects complete breaks and primarily uses a propagating mode with energy concentrated in the head of the rail. Previous experimental studies have demonstrated that a mode with energy concentrated in the head of the rail, is capable of detecting weld reflections at long distances. Exploiting a mode with energy concentrated in the web of the rail would allow us to effectively detect defects in the web of the rail and could also help to distinguish between reflections from welds and cracks. In this paper, we will demonstrate the analysis of a piezoelectric transducer attached to the rail web. The forced response at different frequencies is computed by the Semi-Analytical Finite Element (SAFE) method and compared to a full three-dimensional finite element method using ABAQUS. The SAFE method only requires the rail track cross-section to be meshed using two-dimensional elements. The ABAQUS model in turn requires a full three-dimensional discretisation of the rail track. The SAFE approach can yield poor predictions at cut-on frequencies associated with other modes in the rail. Problematic frequencies are identified and a suitable frequency range identified for transducer design. The forced response results of the two methods were found to be in good agreement with each other. We then use a previously developed SAFE-3D method to analyse a practical transducer over the selected frequency range. The results obtained from the SAFE-3D method are in good agreement with experimental measurements.

  14. 3D Finite Elements Modelling for Design and Performance Analysis of UO Pellets

    Directory of Open Access Journals (Sweden)

    Gustavo L. Demarco

    2011-01-01

    Full Text Available The geometry of a fuel pellet is a compromise among the intention to maximize UO2 content and minimize the temperature gradient taking into account the thermomechanical behaviour, the economy, and the safety of the fuel management during and after irradiation. “Dishings”, “shoulders”, “chamfers”, and/or “a central hole” on a cylinder with an improved l/d relation (length of the pellet/diameter are introduced in order to optimize the shape of the pellet. The MeCom tools coupled with the BaCo code constitutes a complete system for the 3D analysis of the stress strain state of the pellet under irradiation. CANDU and PHWR MOX fuel will be used to illustrate the excellent qualitative agreement between experimental data and calculations by using these computational tools.

  15. Model and numerical analysis of 3D corrosion layer of reinforced concrete structure

    Institute of Scientific and Technical Information of China (English)

    李永和; 葛修润

    2003-01-01

    Under the assumption that the corrosion at the end of steel bolt or steel bar is shaped like the contour line of ellipsoid, a mathematic model and formulas of calculating the thickness of corrosion layer at arbitrary point are presented in this paper. Then regarding the arbitrary points of 3D corrosion layer as patch element model of fictitious displacement discontinuity, we propose the basic solution of 3D problem of the patch element acting on discontinuous displacement. With three basic assumptions of the corrosion layer, we set up the 3D numerical discreted model, and derive the stress boundary equation for fictitious corrosion layer of 3D numerical analysis. We also make the numerical stimulating calculation of the shotcrete structure at some lane using 3D finite element method. The results show that this method is effective and reasonable.

  16. 3D printing meets computational astrophysics: deciphering the structure of η Carinae's inner colliding winds

    Science.gov (United States)

    Madura, T. I.; Clementel, N.; Gull, T. R.; Kruip, C. J. H.; Paardekooper, J.-P.

    2015-06-01

    We present the first 3D prints of output from a supercomputer simulation of a complex astrophysical system, the colliding stellar winds in the massive (≳120 M⊙), highly eccentric (e ˜ 0.9) binary star system η Carinae. We demonstrate the methodology used to incorporate 3D interactive figures into a PDF (Portable Document Format) journal publication and the benefits of using 3D visualization and 3D printing as tools to analyse data from multidimensional numerical simulations. Using a consumer-grade 3D printer (MakerBot Replicator 2X), we successfully printed 3D smoothed particle hydrodynamics simulations of η Carinae's inner (r ˜ 110 au) wind-wind collision interface at multiple orbital phases. The 3D prints and visualizations reveal important, previously unknown `finger-like' structures at orbital phases shortly after periastron (φ ˜ 1.045) that protrude radially outwards from the spiral wind-wind collision region. We speculate that these fingers are related to instabilities (e.g. thin-shell, Rayleigh-Taylor) that arise at the interface between the radiatively cooled layer of dense post-shock primary-star wind and the fast (3000 km s-1), adiabatic post-shock companion-star wind. The success of our work and easy identification of previously unrecognized physical features highlight the important role 3D printing and interactive graphics can play in the visualization and understanding of complex 3D time-dependent numerical simulations of astrophysical phenomena.

  17. Principal component analysis in construction of 3D human knee joint models using a statistical shape model method.

    Science.gov (United States)

    Tsai, Tsung-Yuan; Li, Jing-Sheng; Wang, Shaobai; Li, Pingyue; Kwon, Young-Min; Li, Guoan

    2015-01-01

    The statistical shape model (SSM) method that uses 2D images of the knee joint to predict the three-dimensional (3D) joint surface model has been reported in the literature. In this study, we constructed a SSM database using 152 human computed tomography (CT) knee joint models, including the femur, tibia and patella and analysed the characteristics of each principal component of the SSM. The surface models of two in vivo knees were predicted using the SSM and their 2D bi-plane fluoroscopic images. The predicted models were compared to their CT joint models. The differences between the predicted 3D knee joint surfaces and the CT image-based surfaces were 0.30 ± 0.81 mm, 0.34 ± 0.79 mm and 0.36 ± 0.59 mm for the femur, tibia and patella, respectively (average ± standard deviation). The computational time for each bone of the knee joint was within 30 s using a personal computer. The analysis of this study indicated that the SSM method could be a useful tool to construct 3D surface models of the knee with sub-millimeter accuracy in real time. Thus, it may have a broad application in computer-assisted knee surgeries that require 3D surface models of the knee.

  18. A new approach of building 3D visualization framework for multimodal medical images display and computed assisted diagnosis

    Science.gov (United States)

    Li, Zhenwei; Sun, Jianyong; Zhang, Jianguo

    2012-02-01

    As more and more CT/MR studies are scanning with larger volume of data sets, more and more radiologists and clinician would like using PACS WS to display and manipulate these larger data sets of images with 3D rendering features. In this paper, we proposed a design method and implantation strategy to develop 3D image display component not only with normal 3D display functions but also with multi-modal medical image fusion as well as compute-assisted diagnosis of coronary heart diseases. The 3D component has been integrated into the PACS display workstation of Shanghai Huadong Hospital, and the clinical practice showed that it is easy for radiologists and physicians to use these 3D functions such as multi-modalities' (e.g. CT, MRI, PET, SPECT) visualization, registration and fusion, and the lesion quantitative measurements. The users were satisfying with the rendering speeds and quality of 3D reconstruction. The advantages of the component include low requirements for computer hardware, easy integration, reliable performance and comfortable application experience. With this system, the radiologists and the clinicians can manipulate with 3D images easily, and use the advanced visualization tools to facilitate their work with a PACS display workstation at any time.

  19. Detectability of hepatic tumors during 3D post-processed ultrafast cone-beam computed tomography

    Science.gov (United States)

    Paul, Jijo; Vogl, Thomas J.; Chacko, Annamma

    2015-10-01

    To evaluate hepatic tumor detection using ultrafast cone-beam computed tomography (UCBCT) cross-sectional and 3D post-processed image datasets. 657 patients were examined using UCBCT during hepatic transarterial chemoembolization (TACE), and data were collected retrospectively from January 2012 to September 2014. Tumor detectability, diagnostic ability, detection accuracy and sensitivity were examined for different hepatic tumors using UCBCT cross-sectional, perfusion blood volume (PBV) and UCBCT-MRI (magnetic resonance imaging) fused image datasets. Appropriate statistical tests were used to compare collected sample data. Fused image data showed the significantly higher (all P  color display. Fused image data produced 100% tumor sensitivity due to the simultaneous availability of MRI and UCBCT information during tumor diagnosis. Fused image data produced excellent hepatic tumor sensitivity, detectability and diagnostic ability compared to other datasets assessed. Fused image data is extremely reliable and useful compared to UCBCT cross-sectional or PBV image datasets to depict hepatic tumors during TACE. Partial anatomical visualization on cross-sectional images was compensated by fused image data during tumor diagnosis.

  20. Real-time 3D computed tomographic reconstruction using commodity graphics hardware

    Science.gov (United States)

    Xu, Fang; Mueller, Klaus

    2007-07-01

    The recent emergence of various types of flat-panel x-ray detectors and C-arm gantries now enables the construction of novel imaging platforms for a wide variety of clinical applications. Many of these applications require interactive 3D image generation, which cannot be satisfied with inexpensive PC-based solutions using the CPU. We present a solution based on commodity graphics hardware (GPUs) to provide these capabilities. While GPUs have been employed for CT reconstruction before, our approach provides significant speedups by exploiting the various built-in hardwired graphics pipeline components for the most expensive CT reconstruction task, backprojection. We show that the timings so achieved are superior to those obtained when using the GPU merely as a multi-processor, without a drop in reconstruction quality. In addition, we also show how the data flow across the graphics pipeline can be optimized, by balancing the load among the pipeline components. The result is a novel streaming CT framework that conceptualizes the reconstruction process as a steady flow of data across a computing pipeline, updating the reconstruction result immediately after the projections have been acquired. Using a single PC equipped with a single high-end commodity graphics board (the Nvidia 8800 GTX), our system is able to process clinically-sized projection data at speeds meeting and exceeding the typical flat-panel detector data production rates, enabling throughput rates of 40-50 projections s-1 for the reconstruction of 5123 volumes.

  1. Real-time 3D computed tomographic reconstruction using commodity graphics hardware

    Energy Technology Data Exchange (ETDEWEB)

    Xu Fang; Mueller, Klaus [Center for Visual Computing, Computer Science Department, Stony Brook University, Stony Brook, NY 11794-4400 (United States)

    2007-07-21

    The recent emergence of various types of flat-panel x-ray detectors and C-arm gantries now enables the construction of novel imaging platforms for a wide variety of clinical applications. Many of these applications require interactive 3D image generation, which cannot be satisfied with inexpensive PC-based solutions using the CPU. We present a solution based on commodity graphics hardware (GPUs) to provide these capabilities. While GPUs have been employed for CT reconstruction before, our approach provides significant speedups by exploiting the various built-in hardwired graphics pipeline components for the most expensive CT reconstruction task, backprojection. We show that the timings so achieved are superior to those obtained when using the GPU merely as a multi-processor, without a drop in reconstruction quality. In addition, we also show how the data flow across the graphics pipeline can be optimized, by balancing the load among the pipeline components. The result is a novel streaming CT framework that conceptualizes the reconstruction process as a steady flow of data across a computing pipeline, updating the reconstruction result immediately after the projections have been acquired. Using a single PC equipped with a single high-end commodity graphics board (the Nvidia 8800 GTX), our system is able to process clinically-sized projection data at speeds meeting and exceeding the typical flat-panel detector data production rates, enabling throughput rates of 40-50 projections s{sup -1} for the reconstruction of 512{sup 3} volumes.

  2. Performance Assessment of Three Rendering Engines in 3D Computer Graphics Software

    Directory of Open Access Journals (Sweden)

    Žan Vidmar

    2015-03-01

    Full Text Available The aim of the research was the determination of testing conditions and visual and numerical evaluation of renderings made with three different rendering engines in Maya software, which is widely used for educational and computer art purposes. In the theoretical part the overview of light phenomena and their simulation in virtual space is presented. This is followed by a detailed presentation of the main rendering methods and the results and limitations of their applications to 3D objects. At the end of the theoretical part the importance of a proper testing scene and especially the role of Cornell box are explained. In the experimental part the terms and conditions as well as hardware and software used for the research are presented. This is followed by a description of the procedures, where we focused on the rendering quality and time, which enabled the comparison of settings of different render engines and determination of conditions for further rendering of testing scenes. The experimental part continued with rendering a variety of simple virtual scenes including Cornell box and virtual object with different materials and colours. Apart from visual evaluation, which was the starting point for comparison of renderings, a procedure for numerical estimation and colour deviations of renderings using the selected regions of interest in the final images is presented.

  3. Craniosynostosis: prenatal diagnosis by 2D/3D ultrasound, magnetic resonance imaging and computed tomography.

    Science.gov (United States)

    Helfer, Talita Micheletti; Peixoto, Alberto Borges; Tonni, Gabriele; Araujo Júnior, Edward

    2016-09-01

    Craniosynostosis is defined as the process of premature fusion of one or more of the cranial sutures. It is a common condition that occurs in about 1 to 2,000 live births. Craniosynostosis may be classified in primary or secondary. It is also classified as nonsyndromic or syndromic. According to suture commitment, craniosynostosis may affect a single suture or multiple sutures. There is a wide range of syndromes involving craniosynostosis and the most common are Apert, Pffeifer, Crouzon, Shaethre-Chotzen and Muenke syndromes. The underlying etiology of nonsyndromic craniosynostosis is unknown. Mutations in the fibroblast growth factor (FGF) signalling pathway play a crucial role in the etiology of craniosynostosis syndromes. Prenatal ultrasound`s detection rate of craniosynostosis is low. Nowadays, different methods can be applied for prenatal diagnosis of craniosynostosis, such as two-dimensional (2D) and three-dimensional (3D) ultrasound, magnetic resonance imaging (MRI), computed tomography (CT) scan and, finally, molecular diagnosis. The presence of craniosynostosis may affect the birthing process. Fetuses with craniosynostosis also have higher rates of perinatal complications. In order to avoid the risks of untreated craniosynostosis, children are usually treated surgically soon after postnatal diagnosis. PMID:27622416

  4. Detectability of hepatic tumors during 3D post-processed ultrafast cone-beam computed tomography

    International Nuclear Information System (INIS)

    To evaluate hepatic tumor detection using ultrafast cone-beam computed tomography (UCBCT) cross-sectional and 3D post-processed image datasets.657 patients were examined using UCBCT during hepatic transarterial chemoembolization (TACE), and data were collected retrospectively from January 2012 to September 2014. Tumor detectability, diagnostic ability, detection accuracy and sensitivity were examined for different hepatic tumors using UCBCT cross-sectional, perfusion blood volume (PBV) and UCBCT–MRI (magnetic resonance imaging) fused image datasets. Appropriate statistical tests were used to compare collected sample data.Fused image data showed the significantly higher (all P  <  0.05) diagnostic ability for hepatic tumors compared to UCBCT or PBV image data. The detectability of small hepatic tumors (<5 mm) was significantly reduced (all P  <  0.05) using UCBCT cross-sectional images compared to MRI or fused image data; however, PBV improved tumor detectability using a color display. Fused image data produced 100% tumor sensitivity due to the simultaneous availability of MRI and UCBCT information during tumor diagnosis.Fused image data produced excellent hepatic tumor sensitivity, detectability and diagnostic ability compared to other datasets assessed. Fused image data is extremely reliable and useful compared to UCBCT cross-sectional or PBV image datasets to depict hepatic tumors during TACE. Partial anatomical visualization on cross-sectional images was compensated by fused image data during tumor diagnosis. (paper)

  5. Algorithms for Fast Computing of the 3D-DCT Transform

    Directory of Open Access Journals (Sweden)

    S. Hanus

    2003-04-01

    Full Text Available The algorithm for video compression based on the Three-DimensionalDiscrete Cosine Transform (3D-DCT is presented. The original algorithmof the 3D-DCT has high time complexity. We propose several enhancementsto the original algorithm and make the calculation of the DCT algorithmfeasible for future real-time video compression.

  6. Pep-3D-Search: a method for B-cell epitope prediction based on mimotope analysis

    Directory of Open Access Journals (Sweden)

    Wang Yan

    2008-12-01

    Full Text Available Abstract Background The prediction of conformational B-cell epitopes is one of the most important goals in immunoinformatics. The solution to this problem, even if approximate, would help in designing experiments to precisely map the residues of interaction between an antigen and an antibody. Consequently, this area of research has received considerable attention from immunologists, structural biologists and computational biologists. Phage-displayed random peptide libraries are powerful tools used to obtain mimotopes that are selected by binding to a given monoclonal antibody (mAb in a similar way to the native epitope. These mimotopes can be considered as functional epitope mimics. Mimotope analysis based methods can predict not only linear but also conformational epitopes and this has been the focus of much research in recent years. Though some algorithms based on mimotope analysis have been proposed, the precise localization of the interaction site mimicked by the mimotopes is still a challenging task. Results In this study, we propose a method for B-cell epitope prediction based on mimotope analysis called Pep-3D-Search. Given the 3D structure of an antigen and a set of mimotopes (or a motif sequence derived from the set of mimotopes, Pep-3D-Search can be used in two modes: mimotope or motif. To evaluate the performance of Pep-3D-Search to predict epitopes from a set of mimotopes, 10 epitopes defined by crystallography were compared with the predicted results from a Pep-3D-Search: the average Matthews correlation oefficient (MCC, sensitivity and precision were 0.1758, 0.3642 and 0.6948. Compared with other available prediction algorithms, Pep-3D-Search showed comparable MCC, specificity and precision, and could provide novel, rational results. To verify the capability of Pep-3D-Search to align a motif sequence to a 3D structure for predicting epitopes, 6 test cases were used. The predictive performance of Pep-3D-Search was demonstrated to be

  7. 3D structure determination of protein using TEM single particle analysis.

    Science.gov (United States)

    Sato, Chikara; Mio, Kazuhiro; Kawata, Masaaki; Ogura, Toshihiko

    2014-11-01

    Proteins play important roles in cell functions such as enzymes, cell trafficking, neurotransmission, muscle contraction and hormone secretion. However, some proteins are very difficult to be crystallized and their structures are undetermined. Several techniques have been developed to elucidate the structure of macromolecules; X-ray or electron crystallography, nuclear magnetic resonance spectroscopy, and high-resolution electron microscopy. Among them, electron microscopy based single particle reconstruction (SPA) technique is a computer-aided structure determination method. This method reconstructs the 3D structure from projection images of dispersed protein. A large number of two-dimensional particle images are picked up from EM films, aligned and classified to generate 2D averages, and used to reconstruct the 3D structure by assigning the Euler angle of each 2D average. Due to the necessity of elaborate collaboration between the classical biology and the innovative information technology including parallel computing, scientists needed to break unseen barriers to get a start of this analysis. However, recent progresses in electron microscopes, mathematical algorithms, and computational abilities greatly reduced the height of barriers and expanded targets that are considered to be primarily addressable using single particle analysis. Membrane proteins are one of these targets to which the single particle analysis is successfully applied for the understanding of their 3D structures. For this purpose, we have developed various SPA methods [1-5] and applied them to different proteins [6-8].Here, we introduce reconstructed proteins, and discuss the availability of this technique. The intramembrane-cleaving proteases (I-CLiPs) that sever the transmembrane domains of their substrates have been identified in a range of organisms and play a variety of roles in biological conditions. I-CLiPs have been classified into three groups: serine-, aspartyl- and metalloprotease

  8. NUMERICAL SIMULATION OF 3-D TURBULENT FLOWS IN A CUT-OFF VALVE AND ANALYSIS OF FLOW CHARACTERISTICS IN PIPE

    Institute of Scientific and Technical Information of China (English)

    He Zhi-guo; Mao Gen-hai; Yuan Xing-ming

    2003-01-01

    The 3-D turbulent flows in a valve pipe were described by the incompressible Reynolds-averaged Navier-Stokes equations with an RNG k-ε turbulence model. With the finite volume method and a body-fitted coordinate system, the discretised equations were solved by the SIMPLEST algorithm. The numerical result of a cut-off valve with curved inlet shows the flow characteristics and the main cause of energy loss when fluid flows through a valve. And then, the boundaries of valve were modified in order to reduce the energy loss. The computational results of modified valve show that the numerical value of turbulent kinetic energy is lower, and that the modified design of the 3-D valve boundaries is much better. The analysis of the result also shows that RNG k-ε turbulence model can successfully be used to predict the 3-D turbulent separated flows and the secondary flow inside valve pipes.

  9. STEREOLOGY AND 3D MICROSCOPY: USEFUL ALTERNATIVES OR COMPETITORS IN THE QUANTITATIVE ANALYSIS OF MICROSTRUCTURES?

    Directory of Open Access Journals (Sweden)

    Hans Eckart Exner

    2011-05-01

    Full Text Available With the rapid development of modern techniques for producing 3D images, the assessment of 3D geometry from 2D sections of projections by stereological methods seems to become more and more redundant. The paper aims to show the limits of the two approaches and to outline their relative advantages in practical applications. It is concluded that, for a large variety of applications, classical stereological methods are the most effective way to characterize 3D geometry of irregular microstructures. The basic equations for useful global (field parameters are summarized and their assessment by manual techniques is indicated. For other types of applications asking for complex parameters like shape, arrangement or size distribution, preference should be given to direct 3D measurements. Parameters obtained by 2D analysis of sections or projections are useful for comparison purposes, for empirical correlation analysis or for fingerprinting-type description. Field and feature parameters and the problems of data reductions are discussed.

  10. Quantitative data analysis methods for 3D microstructure characterization of Solid Oxide Cells

    DEFF Research Database (Denmark)

    Jørgensen, Peter Stanley

    the microstructure. The methods are exemplied by the analysis of Ni-YSZ and LSC-CGO electrode samples. Automatic methods for preprocessing the raw 3D image data are developed. The preprocessing steps correct for errors introduced by the image acquisition by the focused ion beam serial sectioning. Alignment...... for gaining further fundamental understanding of how microstructure affects performance. In this work, methods for automatic 3D characterization of microstructure are studied: from the acquisition of 3D image data by focused ion beam tomography to the extraction of quantitative measures that characterize...... of the individual image slices is performed by automatic detection of ducial marks. Uneven illumination is corrected by tting hypersurfaces to the spatial intensity variation in the 3D image data. Routine use of quantitative three dimensional analysis of microstructure is generally restricted by the time consuming...

  11. Laser Welding Analysis for 3D Printed Thermoplastic and Poly-acetate Polymers

    Energy Technology Data Exchange (ETDEWEB)

    Choi, Hae Woon; Yun, Sung Chul [Keimyung University, Daegu (Korea, Republic of)

    2015-07-15

    In this study, experimental and computer simulation results are compared and analyzed. Three-dimensional (3D) fabricated matrices from an MJM 3D printer were joined with poly-acetate thermoplastic polymers using a diode laser. A power range of 5-7 W was used to irradiate the boundary of two polymers. The heated polymers flowed into the matrices of the 3D fabricated structure, and reliable mechanical joining was achieved. Computer simulation showed the temperature distribution in the polymers, and flow direction was estimated based on the flux and temperature information. It was found that the more than the minimum energy threshold was required to effectively join the polymers and that two scans at low-speed were more effective than four scans at high speed.

  12. Laser Welding Analysis for 3D Printed Thermoplastic and Poly-acetate Polymers

    International Nuclear Information System (INIS)

    In this study, experimental and computer simulation results are compared and analyzed. Three-dimensional (3D) fabricated matrices from an MJM 3D printer were joined with poly-acetate thermoplastic polymers using a diode laser. A power range of 5-7 W was used to irradiate the boundary of two polymers. The heated polymers flowed into the matrices of the 3D fabricated structure, and reliable mechanical joining was achieved. Computer simulation showed the temperature distribution in the polymers, and flow direction was estimated based on the flux and temperature information. It was found that the more than the minimum energy threshold was required to effectively join the polymers and that two scans at low-speed were more effective than four scans at high speed

  13. Conversion and improvement of the Rutherford Laboratory's magnetostatic computer code GFUN3D to the NMFECC CDC 7600

    International Nuclear Information System (INIS)

    The implementation of a version of the Rutherford Laboratory's magnetostatic computer code GFUN3D on the CDC 7600 at the National Magnetic Fusion Energy Computer Center is reported. A new iteration technique that greatly increases the probability of convergence and reduces computation time by about 30% for calculations with nonlinear, ferromagnetic materials is included. The use of GFUN3D on the NMFE network is discussed, and suggestions for future work are presented. Appendix A consists of revisions to the GFUN3D User Guide (published by Rutherford Laboratory( that are necessary to use this version. Appendix B contains input and output for some sample calculations. Appendix C is a detailed discussion of the old and new iteration techniques

  14. 3D Printing Meets Computational Astrophysics: Deciphering the Structure of Eta Carinae's Inner Colliding Winds

    CERN Document Server

    Madura, Thomas I; Gull, Theodore R; Kruip, Chael J H; Paardekooper, Jan-Pieter

    2015-01-01

    We present the first 3D prints of output from a supercomputer simulation of a complex astrophysical system, the colliding stellar winds in the massive (>120 M_Sun), highly eccentric (e ~ 0.9) binary star system Eta Carinae. We demonstrate the methodology used to incorporate 3D interactive figures into a PDF journal publication and the benefits of using 3D visualization and 3D printing as tools to analyze data from multidimensional numerical simulations. Using a consumer-grade 3D printer (MakerBot Replicator 2X), we successfully printed 3D smoothed particle hydrodynamics (SPH) simulations of Eta Carinae's inner (r ~ 110 au) wind-wind collision interface at multiple orbital phases. The 3D prints and visualizations reveal important, previously unknown 'finger-like' structures at orbital phases shortly after periastron (phi ~ 1.045) that protrude radially outward from the spiral wind-wind collision region. We speculate that these fingers are related to instabilities (e.g. thin-shell, Rayleigh-Taylor) that arise a...

  15. A 3D sparse motion field filtering for quantitative analysis of fascial layers mobility based on 3D ultrasound scans.

    Science.gov (United States)

    Turini, G; Condino, S; Stecco, A; Ferrari, V; Ferrari, M; Gesi, M

    2015-08-01

    In the last few years, there has been an increasing interest in the role of deep fascia mobility in musculoskeletal dynamics and chronic pain mechanisms. In a previous paper we presented an innovative semiautomatic approach to evaluate the 3D motion of the fascia using ultrasound (US) imaging, generating a sparse deformation vector field. This paper presents an improvement of our original method, focusing on the filtering of the sparse vector field and its validation. Moreover, in order to evaluate the performance of the algorithm, a method is proposed to generate synthetic deformation vector fields, including: expansion, rotation, horizontal shear, and oblique shear components. Preliminary tests on the final synthetic deformation vector fields showed promising results. Further experiments are required in order to optimize the tuning of the algorithm.

  16. 3D photography in the objective analysis of volume augmentation including fat augmentation and dermal fillers.

    Science.gov (United States)

    Meier, Jason D; Glasgold, Robert A; Glasgold, Mark J

    2011-11-01

    The authors present quantitative and objective 3D data from their studies showing long-term results with facial volume augmentation. The first study analyzes fat grafting of the midface and the second study presents augmentation of the tear trough with hyaluronic filler. Surgeons using 3D quantitative analysis can learn the duration of results and the optimal amount to inject, as well as showing patients results that are not demonstrable with standard, 2D photography. PMID:22004863

  17. Intelligent Autonomous Primary 3D Feature Extraction in Vehicle System Dynamics' Analysis: Theory and Application

    Directory of Open Access Journals (Sweden)

    Annamária R. Várkonyi-Kóczy

    2008-01-01

    Full Text Available 3D model reconstruction plays a very important role in computer vision as wellas in different engineering applications. The determination of the 3D model from multipleimages is of key importance. One of the most important difficulties in autonomous 3Dreconstruction is the (automatic selection of the ‘significant’ points which carryinformation about the shape of the 3D bodies i.e. are characteristic from the model point ofview. Another problem to be solved is the point correspondence matching in differentimages.In this paper a 3D reconstruction technique is introduced, which is capable to determinethe 3D model of a scene without any external (human intervention. The method is based onrecent results of image processing, epipolar geometry, and intelligent and soft techniques.Possible applications of the presented algorithm in vehicle system dynamics are alsopresented. The results can be applied advantageously at other engineering fields, like carcrashanalysis, robot guiding, object recognition, supervision of 3D scenes, etc,. as well.

  18. Performance Analysis of a Low-Cost Triangulation-Based 3d Camera: Microsoft Kinect System

    Science.gov (United States)

    . K. Chow, J. C.; Ang, K. D.; Lichti, D. D.; Teskey, W. F.

    2012-07-01

    Recent technological advancements have made active imaging sensors popular for 3D modelling and motion tracking. The 3D coordinates of signalised targets are traditionally estimated by matching conjugate points in overlapping images. Current 3D cameras can acquire point clouds at video frame rates from a single exposure station. In the area of 3D cameras, Microsoft and PrimeSense have collaborated and developed an active 3D camera based on the triangulation principle, known as the Kinect system. This off-the-shelf system costs less than 150 USD and has drawn a lot of attention from the robotics, computer vision, and photogrammetry disciplines. In this paper, the prospect of using the Kinect system for precise engineering applications was evaluated. The geometric quality of the Kinect system as a function of the scene (i.e. variation of depth, ambient light conditions, incidence angle, and object reflectivity) and the sensor (i.e. warm-up time and distance averaging) were analysed quantitatively. This system's potential in human body measurements was tested against a laser scanner and 3D range camera. A new calibration model for simultaneously determining the exterior orientation parameters, interior orientation parameters, boresight angles, leverarm, and object space features parameters was developed and the effectiveness of this calibration approach was explored.

  19. Automated extraction and analysis of rock discontinuity characteristics from 3D point clouds

    Science.gov (United States)

    Bianchetti, Matteo; Villa, Alberto; Agliardi, Federico; Crosta, Giovanni B.

    2016-04-01

    A reliable characterization of fractured rock masses requires an exhaustive geometrical description of discontinuities, including orientation, spacing, and size. These are required to describe discontinuum rock mass structure, perform Discrete Fracture Network and DEM modelling, or provide input for rock mass classification or equivalent continuum estimate of rock mass properties. Although several advanced methodologies have been developed in the last decades, a complete characterization of discontinuity geometry in practice is still challenging, due to scale-dependent variability of fracture patterns and difficult accessibility to large outcrops. Recent advances in remote survey techniques, such as terrestrial laser scanning and digital photogrammetry, allow a fast and accurate acquisition of dense 3D point clouds, which promoted the development of several semi-automatic approaches to extract discontinuity features. Nevertheless, these often need user supervision on algorithm parameters which can be difficult to assess. To overcome this problem, we developed an original Matlab tool, allowing fast, fully automatic extraction and analysis of discontinuity features with no requirements on point cloud accuracy, density and homogeneity. The tool consists of a set of algorithms which: (i) process raw 3D point clouds, (ii) automatically characterize discontinuity sets, (iii) identify individual discontinuity surfaces, and (iv) analyse their spacing and persistence. The tool operates in either a supervised or unsupervised mode, starting from an automatic preliminary exploration data analysis. The identification and geometrical characterization of discontinuity features is divided in steps. First, coplanar surfaces are identified in the whole point cloud using K-Nearest Neighbor and Principal Component Analysis algorithms optimized on point cloud accuracy and specified typical facet size. Then, discontinuity set orientation is calculated using Kernel Density Estimation and

  20. Lagrangian Finite Element Method for 3D Time-Dependent Viscoelastic Flow Computations using Integral Models

    DEFF Research Database (Denmark)

    Rasmussen, Henrik Koblitz

    2000-01-01

    The 3D-LIM has as yet been used to simulate the following two three-dimensional problems. First, the method has been used to simulete for viscoelastic end-plate instability that occurs under certain conditions in the transient filament stretching apparatus for pressure sensitive adhesives...... (polymeric melts) and polymeric solutions. Secondly, the 3D-LIM has also been applied to calculate the inflation of a thick sheet of a polymer melt into an elliptic cylinder. These problems all include free surfaces. As the governing equations are solved for the particle positions, the motion of surfaces can...... be followed easily even in 3D viscoelastic flow....

  1. 3-D inelastic analysis methods for hot section components (base program). [turbine blades, turbine vanes, and combustor liners

    Science.gov (United States)

    Wilson, R. B.; Bak, M. J.; Nakazawa, S.; Banerjee, P. K.

    1984-01-01

    A 3-D inelastic analysis methods program consists of a series of computer codes embodying a progression of mathematical models (mechanics of materials, special finite element, boundary element) for streamlined analysis of combustor liners, turbine blades, and turbine vanes. These models address the effects of high temperatures and thermal/mechanical loadings on the local (stress/strain) and global (dynamics, buckling) structural behavior of the three selected components. These models are used to solve 3-D inelastic problems using linear approximations in the sense that stresses/strains and temperatures in generic modeling regions are linear functions of the spatial coordinates, and solution increments for load, temperature and/or time are extrapolated linearly from previous information. Three linear formulation computer codes, referred to as MOMM (Mechanics of Materials Model), MHOST (MARC-Hot Section Technology), and BEST (Boundary Element Stress Technology), were developed and are described.

  2. Computer numerical control (CNC) lithography: light-motion synchronized UV-LED lithography for 3D microfabrication

    International Nuclear Information System (INIS)

    This paper presents a computer-numerical-controlled ultraviolet light-emitting diode (CNC UV-LED) lithography scheme for three-dimensional (3D) microfabrication. The CNC lithography scheme utilizes sequential multi-angled UV light exposures along with a synchronized switchable UV light source to create arbitrary 3D light traces, which are transferred into the photosensitive resist. The system comprises a switchable, movable UV-LED array as a light source, a motorized tilt-rotational sample holder, and a computer-control unit. System operation is such that the tilt-rotational sample holder moves in a pre-programmed routine, and the UV-LED is illuminated only at desired positions of the sample holder during the desired time period, enabling the formation of complex 3D microstructures. This facilitates easy fabrication of complex 3D structures, which otherwise would have required multiple manual exposure steps as in the previous multidirectional 3D UV lithography approach. Since it is batch processed, processing time is far less than that of the 3D printing approach at the expense of some reduction in the degree of achievable 3D structure complexity. In order to produce uniform light intensity from the arrayed LED light source, the UV-LED array stage has been kept rotating during exposure. UV-LED 3D fabrication capability was demonstrated through a plurality of complex structures such as V-shaped micropillars, micropanels, a micro-‘hi’ structure, a micro-‘cat’s claw,’ a micro-‘horn,’ a micro-‘calla lily,’ a micro-‘cowboy’s hat,’ and a micro-‘table napkin’ array. (paper)

  3. Computer numerical control (CNC) lithography: light-motion synchronized UV-LED lithography for 3D microfabrication

    Science.gov (United States)

    Kim, Jungkwun; Yoon, Yong-Kyu; Allen, Mark G.

    2016-03-01

    This paper presents a computer-numerical-controlled ultraviolet light-emitting diode (CNC UV-LED) lithography scheme for three-dimensional (3D) microfabrication. The CNC lithography scheme utilizes sequential multi-angled UV light exposures along with a synchronized switchable UV light source to create arbitrary 3D light traces, which are transferred into the photosensitive resist. The system comprises a switchable, movable UV-LED array as a light source, a motorized tilt-rotational sample holder, and a computer-control unit. System operation is such that the tilt-rotational sample holder moves in a pre-programmed routine, and the UV-LED is illuminated only at desired positions of the sample holder during the desired time period, enabling the formation of complex 3D microstructures. This facilitates easy fabrication of complex 3D structures, which otherwise would have required multiple manual exposure steps as in the previous multidirectional 3D UV lithography approach. Since it is batch processed, processing time is far less than that of the 3D printing approach at the expense of some reduction in the degree of achievable 3D structure complexity. In order to produce uniform light intensity from the arrayed LED light source, the UV-LED array stage has been kept rotating during exposure. UV-LED 3D fabrication capability was demonstrated through a plurality of complex structures such as V-shaped micropillars, micropanels, a micro-‘hi’ structure, a micro-‘cat’s claw,’ a micro-‘horn,’ a micro-‘calla lily,’ a micro-‘cowboy’s hat,’ and a micro-‘table napkin’ array.

  4. 3D thermo-chemical-mechanical analysis of the pultrusion process

    DEFF Research Database (Denmark)

    Baran, Ismet; Hattel, Jesper Henri; Tutum, Cem C.

    2013-01-01

    In the present study, a 3D Eulerian thermo-chemical analysis is sequentially coupled with a 3D Lagrangian quasi static mechanical analysis of the pultrusion process. The temperature and degree of cure profiles at the steady state are first calculated in the thermo-chemical analysis....... In the mechanical analysis, the developments of the process induced stresses and distortions during the process are predicted using the already obtained temperature and degree of cure profiles together with the glass transition temperature. The predictions of the transverse transient stresses and distortions...... are found to be similar as compared to the available data in the literature. Using the proposed 3D mechanical analysis, different mechanical behaviour is obtained for the longitudinal stress development as distinct from the stress development in the transverse directions. Even though the matrix material...

  5. Conceptual detector development and Monte Carlo simulation of a novel 3D breast computed tomography system

    Science.gov (United States)

    Ziegle, Jens; Müller, Bernhard H.; Neumann, Bernd; Hoeschen, Christoph

    2016-03-01

    A new 3D breast computed tomography (CT) system is under development enabling imaging of microcalcifications in a fully uncompressed breast including posterior chest wall tissue. The system setup uses a steered electron beam impinging on small tungsten targets surrounding the breast to emit X-rays. A realization of the corresponding detector concept is presented in this work and it is modeled through Monte Carlo simulations in order to quantify first characteristics of transmission and secondary photons. The modeled system comprises a vertical alignment of linear detectors hold by a case that also hosts the breast. Detectors are separated by gaps to allow the passage of X-rays towards the breast volume. The detectors located directly on the opposite side of the gaps detect incident X-rays. Mechanically moving parts in an imaging system increase the duration of image acquisition and thus can cause motion artifacts. So, a major advantage of the presented system design is the combination of the fixed detectors and the fast steering electron beam which enable a greatly reduced scan time. Thereby potential motion artifacts are reduced so that the visualization of small structures such as microcalcifications is improved. The result of the simulation of a single projection shows high attenuation by parts of the detector electronics causing low count levels at the opposing detectors which would require a flat field correction, but it also shows a secondary to transmission ratio of all counted X-rays of less than 1 percent. Additionally, a single slice with details of various sizes was reconstructed using filtered backprojection. The smallest detail which was still visible in the reconstructed image has a size of 0.2mm.

  6. 3D printing of preclinical X-ray computed tomographic data sets.

    Science.gov (United States)

    Doney, Evan; Krumdick, Lauren A; Diener, Justin M; Wathen, Connor A; Chapman, Sarah E; Stamile, Brian; Scott, Jeremiah E; Ravosa, Matthew J; Van Avermaete, Tony; Leevy, W Matthew

    2013-03-22

    Three-dimensional printing allows for the production of highly detailed objects through a process known as additive manufacturing. Traditional, mold-injection methods to create models or parts have several limitations, the most important of which is a difficulty in making highly complex products in a timely, cost-effective manner.(1) However, gradual improvements in three-dimensional printing technology have resulted in both high-end and economy instruments that are now available for the facile production of customized models.(2) These printers have the ability to extrude high-resolution objects with enough detail to accurately represent in vivo images generated from a preclinical X-ray CT scanner. With proper data collection, surface rendering, and stereolithographic editing, it is now possible and inexpensive to rapidly produce detailed skeletal and soft tissue structures from X-ray CT data. Even in the early stages of development, the anatomical models produced by three-dimensional printing appeal to both educators and researchers who can utilize the technology to improve visualization proficiency. (3, 4) The real benefits of this method result from the tangible experience a researcher can have with data that cannot be adequately conveyed through a computer screen. The translation of pre-clinical 3D data to a physical object that is an exact copy of the test subject is a powerful tool for visualization and communication, especially for relating imaging research to students, or those in other fields. Here, we provide a detailed method for printing plastic models of bone and organ structures derived from X-ray CT scans utilizing an Albira X-ray CT system in conjunction with PMOD, ImageJ, Meshlab, Netfabb, and ReplicatorG software packages.

  7. A new cone-beam computed tomography system for dental applications with innovative 3D software

    Energy Technology Data Exchange (ETDEWEB)

    Pasini, Alessandro; Bianconi, D.; Rossi, A. [University of Bologna, Department of Physics, Bologna (Italy); NECTAR Imaging srl Imola (Italy); Casali, F. [University of Bologna, Department of Physics, Bologna (Italy); Bontempi, M. [CEFLA Dental Group Imola (Italy)

    2007-02-15

    Objective Cone beam computed tomography (CBCT) is an important image technique for oral surgery (dentoalveolar surgery and dental implantology) and maxillofacial applications. This technique requires compact sized scanners with a relatively low radiation dosage, which makes them suitable for imaging of the craniofacial region. This article aims to present the concept and the preliminary findings obtained with the prototype of a new CBCT scanner with dedicated 3D software, specifically designed for dental imaging. Methods The prototype implements an X-ray tube with a nominal focal spot of 0.5 mm operating at 70-100 kVp and 1-4 mA. The detector is a 6 in. image intensifier coupled with a digital CCD camera. Dosimetry was performed on a RANDO anthropomorphic phantom using Beryllium Oxide thermo-luminescent dosimeters positioned in the phantom in the following site: eyes, thyroid, skin (lips, cheeks, back of the neck), brain, mandible, maxilla and parotid glands. Doses were measured using four configurations, changing the field-of-view (4'' and 6'') and acquisition time (10 and 20 s) of the CBCT. Acquisitions were performed with different parameters regarding the x-ray tube, pixel size and acquisition geometries to evaluate image quality in relation to modulation transfer function (MTF), noise and geometric accuracy. Results The prototype was able to acquire a complete maxillofacial scan in 10-15 s. The CT reconstruction algorithm delivered images that were judged to have high quality, allowing for precise volume rendering. The radiation dose was determined to be 1-1.5 times that of the dose applied during conventional dental panoramic studies. Conclusion Preliminary studies using the CBCT prototype indicate that this device provides images with acceptable diagnostic content at a relatively low radiation dosage, if compared to systems currently available on the market. (orig.)

  8. A Pipeline for 3D Multimodality Image Integration and Computer-assisted Planning in Epilepsy Surgery

    OpenAIRE

    Nowell, Mark; Rodionov, Roman; Zombori, Gergely; Sparks, Rachel; Rizzi, Michele; Ourselin, Sebastien; Miserocchi, Anna; McEvoy, Andrew; Duncan, John

    2016-01-01

    Epilepsy surgery is challenging and the use of 3D multimodality image integration (3DMMI) to aid presurgical planning is well-established. Multimodality image integration can be technically demanding, and is underutilised in clinical practice. We have developed a single software platform for image integration, 3D visualization and surgical planning. Here, our pipeline is described in step-by-step fashion, starting with image acquisition, proceeding through image co-registration, manual segmen...

  9. Computed tomography study of VAPEX process in laboratory 3D model

    Energy Technology Data Exchange (ETDEWEB)

    Wu, G.Q.; Kantzas, A. [Calgary Univ., AB (Canada). Tomographic Imaging and Porous Media Laboratory; Salama, D. [Nexen Inc., Calgary, AB (Canada)

    2008-07-01

    This paper provided details of a 3-D laboratory model of the VAPEX process that used computerized tomography (CT) to examine vapour chamber expansion behaviour in longitudinal and radial directions. The model was comprised of an aluminum cylinder with 2 slotted tubes installed inside to act as injection and production wells. Propane was used as a solvent with heavy oil. The results of experiments conducted with the model showed that the V shape vapour chamber expansion pattern predicted by the 2-D model was a localized phenomenon. The dominant characteristic of the vapour chamber was an overriding of the injected solvent at the top of the model. The overriding was attributed to gravity segregation. The study also showed that longitudinal expansion was more significant than upwards expansion during the early stages of the VAPEX process. Oil production performance was then examined using different solvent injection rates. An analysis of the CT images was conducted to obtain model porosity, density, and oil saturation profiles. The study demonstrated that pressure cycles caused oil to be produced intermittently. Oil swelling by solvent gas dissolution was an important recovery mechanism. It was concluded that solvent soaking can be used to recover additional residual oil during the VAPEX process. 19 refs., 1 tab., 24 figs.

  10. Development, Verification and Use of Gust Modeling in the NASA Computational Fluid Dynamics Code FUN3D

    Science.gov (United States)

    Bartels, Robert E.

    2012-01-01

    This paper presents the implementation of gust modeling capability in the CFD code FUN3D. The gust capability is verified by computing the response of an airfoil to a sharp edged gust. This result is compared with the theoretical result. The present simulations will be compared with other CFD gust simulations. This paper also serves as a users manual for FUN3D gust analyses using a variety of gust profiles. Finally, the development of an Auto-Regressive Moving-Average (ARMA) reduced order gust model using a gust with a Gaussian profile in the FUN3D code is presented. ARMA simulated results of a sequence of one-minus-cosine gusts is shown to compare well with the same gust profile computed with FUN3D. Proper Orthogonal Decomposition (POD) is combined with the ARMA modeling technique to predict the time varying pressure coefficient increment distribution due to a novel gust profile. The aeroelastic response of a pitch/plunge airfoil to a gust environment is computed with a reduced order model, and compared with a direct simulation of the system in the FUN3D code. The two results are found to agree very well.

  11. 2D and 3D stability analysis of slurry trench in frictional/cohesive soil

    Institute of Scientific and Technical Information of China (English)

    Chang-yu HAN; Jin-jian CHEN; Jian-hua WANG; Xiao-he XIA

    2013-01-01

    A 2D and 3D kinematically admissible rotational failure mechanism is presented for homogeneous slurry trenches in frictional/cohesive soils.Analytical approaches are derived to obtain the upper bounds on slurry trench stability in the strict framework of limit analysis.It is shown that the factor of safety from a 3D analysis will be greater than that from a 2D analysis.Compared with the limit equilibrium method,the limit analysis method yields an unconservative estimate on the safety factors.A set of examples are presented in a wide range of parameters for 2D and 3D homogeneous slurry trenches.The factor of safety increases with increasing slurry and soil bulk density ratio,cohesion,friction angle,and with decreasing slurry level depth and trench depth ratio,trench width and depth ratio.It is convenient to assess the safety for the homogeneous slurry trenches in practical applications.

  12. Braking Distance Prediction by Hydroplaning Analysis of 3-D Patterned Tire Model

    Science.gov (United States)

    Cho, Jin-Rae; Choi, Joo-Hyoung; Lee, Hong-Woo; Woo, Jong-Shik; Yoo, Wan-Suk

    In this paper, we present a wet-road braking distance estimate for the vehicles equipped with ABS (Anti-lock Brake System). In order to effectively compute the interval-wise braking times and the resulting total braking distance, we divide the entire speed interval at braking into finite number of uniform sub-intervals and apply the energy conservation law to individual sub-intervals. The proposed method is based on a numerical-analytical approach such that the frictional energy loss of the patterned tire is computed by 3-D hydroplaning analysis while the other at the disc pad is analytically derived. The hydroplaning simulation is performed by generally coupling an Eulerian finite volume method and an explicit Lagrangian finite element method. The operation of ABS is numerically implemented by controlling the tire angular velocity such that the preset tire slip ratio on the wet road is maintained. Numerical results are presented to illustrative and verify the the proposed numerical estimate.

  13. Large deformation inelastic analysis of impact for shipping casks. [DYNA3D Code

    Energy Technology Data Exchange (ETDEWEB)

    Charman, C.M.; Grenier, R.M. (General Atomic Co., San Diego, CA (USA)); Nickell, R.E. (Applied Science and Technology, Poway, CA (USA))

    1982-09-01

    This paper describes the use of two- and three-dimensional nonlinear finite element computer programs to design a radioative material transportation cask to withstand a drop of 30 feet onto an unyielding surface. Because of recent advancement in the area of non-linear finite element code development, the use of such codes for an iterative design process is becoming practicable. The paper begins with a section dealing with a two-dimensional side drop analysis and is followed by a discussion of the general capabilities of DYNA3D and a brief discussion of the implementation of the code on a computational mainframe unlike any for which the developer had intended. Then, a section on three-dimensional models of center-of-gravity over a corner impact follows, which introduces design features such as bolted closures, internal impact limiter, seals and shear rings. Figs. showing the deformed model grids are included. Stress and strain results are given in the subsequent section. Finally, we interpret these results in terms of possible rules being developed by the American Society of Mechanical Engineers (ASME) Boiler and Pressure Vessel Code committees.

  14. Analysis of simple 2-D and 3-D metal structures subjected to fragment impact

    Science.gov (United States)

    Witmer, E. A.; Stagliano, T. R.; Spilker, R. L.; Rodal, J. J. A.

    1977-01-01

    Theoretical methods were developed for predicting the large-deflection elastic-plastic transient structural responses of metal containment or deflector (C/D) structures to cope with rotor burst fragment impact attack. For two-dimensional C/D structures both, finite element and finite difference analysis methods were employed to analyze structural response produced by either prescribed transient loads or fragment impact. For the latter category, two time-wise step-by-step analysis procedures were devised to predict the structural responses resulting from a succession of fragment impacts: the collision force method (CFM) which utilizes an approximate prediction of the force applied to the attacked structure during fragment impact, and the collision imparted velocity method (CIVM) in which the impact-induced velocity increment acquired by a region of the impacted structure near the impact point is computed. The merits and limitations of these approaches are discussed. For the analysis of 3-d responses of C/D structures, only the CIVM approach was investigated.

  15. High-Performance Computation of Distributed-Memory Parallel 3D Voronoi and Delaunay Tessellation

    Energy Technology Data Exchange (ETDEWEB)

    Peterka, Tom; Morozov, Dmitriy; Phillips, Carolyn

    2014-11-14

    Computing a Voronoi or Delaunay tessellation from a set of points is a core part of the analysis of many simulated and measured datasets: N-body simulations, molecular dynamics codes, and LIDAR point clouds are just a few examples. Such computational geometry methods are common in data analysis and visualization; but as the scale of simulations and observations surpasses billions of particles, the existing serial and shared-memory algorithms no longer suffice. A distributed-memory scalable parallel algorithm is the only feasible approach. The primary contribution of this paper is a new parallel Delaunay and Voronoi tessellation algorithm that automatically determines which neighbor points need to be exchanged among the subdomains of a spatial decomposition. Other contributions include periodic and wall boundary conditions, comparison of our method using two popular serial libraries, and application to numerous science datasets.

  16. Molecular determinants of juvenile hormone action as revealed by 3D QSAR analysis in Drosophila.

    Directory of Open Access Journals (Sweden)

    Denisa Liszeková

    Full Text Available BACKGROUND: Postembryonic development, including metamorphosis, of many animals is under control of hormones. In Drosophila and other insects these developmental transitions are regulated by the coordinate action of two principal hormones, the steroid ecdysone and the sesquiterpenoid juvenile hormone (JH. While the mode of ecdysone action is relatively well understood, the molecular mode of JH action remains elusive. METHODOLOGY/PRINCIPAL FINDINGS: To gain more insights into the molecular mechanism of JH action, we have tested the biological activity of 86 structurally diverse JH agonists in Drosophila melanogaster. The results were evaluated using 3D QSAR analyses involving CoMFA and CoMSIA procedures. Using this approach we have generated both computer-aided and species-specific pharmacophore fingerprints of JH and its agonists, which revealed that the most active compounds must possess an electronegative atom (oxygen or nitrogen at both ends of the molecule. When either of these electronegative atoms are replaced by carbon or the distance between them is shorter than 11.5 A or longer than 13.5 A, their biological activity is dramatically decreased. The presence of an electron-deficient moiety in the middle of the JH agonist is also essential for high activity. CONCLUSIONS/SIGNIFICANCE: The information from 3D QSAR provides guidelines and mechanistic scope for identification of steric and electrostatic properties as well as donor and acceptor hydrogen-bonding that are important features of the ligand-binding cavity of a JH target protein. In order to refine the pharmacophore analysis and evaluate the outcomes of the CoMFA and CoMSIA study we used pseudoreceptor modeling software PrGen to generate a putative binding site surrogate that is composed of eight amino acid residues corresponding to the defined molecular interactions.

  17. 3D models as a platform for urban analysis and studies on human perception of space

    Science.gov (United States)

    Fisher-Gewirtzman, D.

    2012-10-01

    The objective of this work is to develop an integrated visual analysis and modelling for environmental and urban systems in respect to interior space layout and functionality. This work involves interdisciplinary research efforts that focus primarily on architecture design discipline, yet incorporates experts from other and different disciplines, such as Geoinformatics, computer sciences and environment-behavior studies. This work integrates an advanced Spatial Openness Index (SOI) model within realistic geovisualized Geographical Information System (GIS) environment and assessment using subjective residents' evaluation. The advanced SOI model measures the volume of visible space at any required view point practically, for every room or function. This model enables accurate 3D simulation of the built environment regarding built structure and surrounding vegetation. This paper demonstrates the work on a case study. A 3D model of Neve-Shaanan neighbourhood in Haifa was developed. Students that live in this neighbourhood had participated in this research. Their apartments were modelled in details and inserted into a general model, representing topography and the volumes of buildings. The visual space for each room in every apartment was documented and measured and at the same time the students were asked to answer questions regarding their perception of space and view from their residence. The results of this research work had shown potential contribution to professional users, such as researchers, designers and city planners. This model can be easily used by professionals and by non-professionals such as city dwellers, contractors and developers. This work continues with additional case studies having different building typologies and functions variety, using virtual reality tools.

  18. 3D numerical simulation analysis of passive drag near free surface in swimming

    Science.gov (United States)

    Zhan, Jie-min; Li, Tian-zeng; Chen, Xue-bin; Li, Yok-sheung; Wai, Wing-hong Onyx

    2015-04-01

    The aim of this work is to build a 3D numerical model to study the characteristics of passive drag on competitive swimmers taking into account the impact of the free surface. This model solves the 3D incompressible Navier-Stokes equations using RNG k- ɛ turbulence closure. The volume of fluid (VOF) method is used to locate the free surface. The 3D virtual model is created by Computer Aided Industrial Design (CAID) software, Rhinoceros. Firstly, a specific posture of swimming is studied. The simulation results are in good agreement with the data from mannequin towing experiments. The effects of a swimmer's arms and legs positions on swimming performance are then studied. Finally, it is demonstrated that the present method is capable of simulating gliding near the free surface.

  19. 3D Numerical Simulation Analysis of Passive Drag near Free Surface in Swimming

    Institute of Scientific and Technical Information of China (English)

    詹杰民; 李天赠; 陈学彬; 李毓湘; 韦永康

    2015-01-01

    The aim of this work is to build a 3D numerical model to study the characteristics of passive drag on competitive swimmers taking into account the impact of the free surface. This model solves the 3D incompressible Navier-Stokes equations using RNG k-εturbulence closure. The volume of fluid (VOF) method is used to locate the free surface. The 3D virtual model is created by Computer Aided Industrial Design (CAID) software, Rhinoceros. Firstly, a specific posture of swimming is studied. The simulation results are in good agreement with the data from mannequin towing experiments. The effects of a swimmer’s arms and legs positions on swimming performance are then studied. Finally, it is demonstrated that the present method is capable of simulating gliding near the free surface.

  20. 3-D MT modelling and HMT analysis for the north-west part of Poland

    Science.gov (United States)

    Ślęzak, Katarzyna; Brasse, Heinrich; Jóźwiak, Waldemar; Nowożyński, Krzysztof

    2014-05-01

    The area covered by magnetotelluric survey is a part of the Trans-European Suture Zone (TESZ). The TESZ is the largest tectonic boundary in Europe, extending from the British Isles through Poland to the Black Sea. Several two-dimensional (2-D) models of the electrical resistivity distribution have already been constructed for this area but it turned out that the region had a complicated, three-dimensional structure. Thus a three-dimensional (3-D) inversion model appears to be relevant and interesting to investigate. In cooperation with the Berlin Magnetotelluric Work Group several additional long-period magnetotelluric (LMT) sites were assembled in 2012 and 2013. The mesh was located in the north-west part of Poland (Pomerania region). As a result we obtained 17 new sites over the surface area of approximately of 100 km × 50 km, in addition to 9 stations set up earlier. The collected data were converted to a uniform format and the initial processing was executed. By using the latest software the transfer functions (impedances) and the ellipses of the phase tensor for the sites of our mesh have been calculated. The apparent resistivities and phase responses as functions of period are calculated from the impedance components. The computer program ModEM (Egbert G.D., Kelbert A., 2012), which is used for this work, is a parallel 3-D inversion program for magnetotelluric data. The inversion code employs MPI and, besides impedances, includes tippers and magnetic tensor. The main result of this work is a 3-D model with a good RMS fit of ~2.2 which we could compare with previous outcomes. In this model two prominent, NW-SE striking conductive lineaments located in the mid-crustal levels are noticed. These structures we relate tentatively to the Variscan and Caledonian deformation fronts. Also the analysis of the invariants of the Horizontal Magnetic Tensor (HMT) obtained from previous results (Jozwiak, 2012) allowed us to examine the TESZ in more detail.

  1. 3D finite element analysis of porous Ti-based alloy prostheses.

    Science.gov (United States)

    Mircheski, Ile; Gradišar, Marko

    2016-11-01

    In this paper, novel designs of porous acetabular cups are created and tested with 3D finite element analysis (FEA). The aim is to develop a porous acetabular cup with low effective radial stiffness of the structure, which will be near to the architectural and mechanical behavior of the natural bone. For the realization of this research, a 3D-scanner technology was used for obtaining a 3D-CAD model of the pelvis bone, a 3D-CAD software for creating a porous acetabular cup, and a 3D-FEA software for virtual testing of a novel design of the porous acetabular cup. The results obtained from this research reveal that a porous acetabular cup from Ti-based alloys with 60 ± 5% porosity has the mechanical behavior and effective radial stiffness (Young's modulus in radial direction) that meet and exceed the required properties of the natural bone. The virtual testing with 3D-FEA of a novel design with porous structure during the very early stage of the design and the development of orthopedic implants, enables obtaining a new or improved biomedical implant for a relatively short time and reduced price. PMID:27015664

  2. FRICTIONAL CONTACT MULTIPOLE-BEM AND 3-D ANALYSIS OF SCREWPAIRS

    Institute of Scientific and Technical Information of China (English)

    Chen Xiumin; Shen Guangxian; Liu Deyi

    2004-01-01

    The 3-D traction field in the pressure screw-pair of a 3 500 heavy and medium plate mill press down system is successfully calculated by applying the 3-D frictional contact multipole-BEM and the corresponding program that has been developed. The computing results show the medium diameter orientation is unreliable, especially under the interference of an outer force couple. Under such working conditions, the circumferential traction distribution on the screw teeth is extremely uneven, which is the main reason for the destruction and short life time of screw-pairs. When utilizing the same precision (the relative tolerance is 10×10-5),the mltipole-BEM uses almost the CPU time as used by the FEM,but the needed computer menory size is only one eighieth of that needed by the FEM(10 MB vs.800 MB).The multipole-BEM is well suited for computing large-scale engineering problems.

  3. 3D FACE RECOGNITION FROM RANGE IMAGES BASED ON CURVATURE ANALYSIS

    Directory of Open Access Journals (Sweden)

    Suranjan Ganguly

    2014-02-01

    Full Text Available In this paper, we present a novel approach for three-dimensional face recognition by extracting the curvature maps from range images. There are four types of curvature maps: Gaussian, Mean, Maximum and Minimum curvature maps. These curvature maps are used as a feature for 3D face recognition purpose. The dimension of these feature vectors is reduced using Singular Value Decomposition (SVD technique. Now from calculated three components of SVD, the non-negative values of ‘S’ part of SVD is ranked and used as feature vector. In this proposed method, two pair-wise curvature computations are done. One is Mean, and Maximum curvature pair and another is Gaussian and Mean curvature pair. These are used to compare the result for better recognition rate. This automated 3D face recognition system is focused in different directions like, frontal pose with expression and illumination variation, frontal face along with registered face, only registered face and registered face from different pose orientation across X, Y and Z axes. 3D face images used for this research work are taken from FRAV3D database. The pose variation of 3D facial image is being registered to frontal pose by applying one to all registration technique then curvature mapping is applied on registered face images along with remaining frontal face images. For the classification and recognition purpose five layer feed-forward back propagation neural network classifiers is used, and the corresponding result is discussed in section 4.

  4. Uncertainty propagation methodology and nuclear data sensitivity analysis in 3D heterogeneous problems

    International Nuclear Information System (INIS)

    This paper presents a 3D uncertainty propagation methodology and its application to the case of a small heterogeneous reactor system ('slab' reactor benchmark). Key neutron parameters (keff, reactivity worth, local power, ...) and their corresponding cross-section sensitivities are derived by using the French calculation route APOLLO2 (2D transport lattice code), CRONOS2 (3D diffusion code) and TRIPOLI4 (3D Monte-Carlo reference calculations) with consistent JEF2.2 cross-section libraries (punctual or CEA93 multigroup cross-sections) and adapted perturbation methods (the Heuristically-based Generalized Perturbation Theory implemented in the framework of the CRONOS2 diffusion method or the correlation techniques used in Monte-Carlo simulations). The investigation of the slab system underlined notable differences between the 2D/3D computed sensitivity coefficients and consequently a priori uncertainties (when sensitivity coefficients are combined with covariance matrices the discrepancies rise up to 20% due to thermal and fast flux variations). In addition, the induced local power effect of nuclear data perturbations (JEF-2.2 vs. Leal-Derrien-Wright-Larson 235U evaluation) had been be correctly estimated with the standard 3D CRONOS2 depletion calculations. For industrial applications (PWR neutron parameters optimization problems, R and D studies dealing with the design of future fission reactors, ...), the same calculation route could be advantageously applied to infer the target accuracies (knowing the required safety criteria) of future nuclear data evaluation (JEFF-3 data library for instance). (author)

  5. KNOW-BLADE task-3.3 report: Rotor blade computations with 3D vortex generators

    DEFF Research Database (Denmark)

    Johansen, J.; Sørensen, Niels N.; Reck, M.;

    2005-01-01

    of the partners have modelled the airfoil section as a thin airfoil section with symmetry boundary conditions in the span wise direction to simulate anarray of VGs. The wind turbine blade is the LM19.1 blade equipped with one pair of VGs placed at radius = 8.5 m. In general all partners have successfully modelled...... vortex generators in 3D, which eventually generates vortices and mixes the boundary layer.A large effort has been on generating the numerical meshes since this is a relatively complex configuration and a large variation of length and time scales is present. Even though the quantitative agreement......The present report describes the work done in work package WP3.3: Aerodynamic Accessories in 3D in the EC project KNOW-BLADE. Vortex generators (VGs) are modelled in 3D Navier-Stokes solvers and applied on the flow around an airfoil and a wind turbineblade. Three test cases have been investigated...

  6. A collaborative computing framework of cloud network and WBSN applied to fall detection and 3-D motion reconstruction.

    Science.gov (United States)

    Lai, Chin-Feng; Chen, Min; Pan, Jeng-Shyang; Youn, Chan-Hyun; Chao, Han-Chieh

    2014-03-01

    As cloud computing and wireless body sensor network technologies become gradually developed, ubiquitous healthcare services prevent accidents instantly and effectively, as well as provides relevant information to reduce related processing time and cost. This study proposes a co-processing intermediary framework integrated cloud and wireless body sensor networks, which is mainly applied to fall detection and 3-D motion reconstruction. In this study, the main focuses includes distributed computing and resource allocation of processing sensing data over the computing architecture, network conditions and performance evaluation. Through this framework, the transmissions and computing time of sensing data are reduced to enhance overall performance for the services of fall events detection and 3-D motion reconstruction.

  7. Accuracy and reliability of measurements obtained from computed tomography 3D volume rendered images.

    Science.gov (United States)

    Stull, Kyra E; Tise, Meredith L; Ali, Zabiullah; Fowler, David R

    2014-05-01

    Forensic pathologists commonly use computed tomography (CT) images to assist in determining the cause and manner of death as well as for mass disaster operations. Even though the design of the CT machine does not inherently produce distortion, most techniques within anthropology rely on metric variables, thus concern exists regarding the accuracy of CT images reflecting an object's true dimensions. Numerous researchers have attempted to validate the use of CT images, however the comparisons have only been conducted on limited elements and/or comparisons were between measurements taken from a dry element and measurements taken from the 3D-CT image of the same dry element. A full-body CT scan was performed prior to autopsy at the Office of the Chief Medical Examiner for the State of Maryland. Following autopsy, the remains were processed to remove all soft tissues and the skeletal elements were subject to an additional CT scan. Percent differences and Bland-Altman plots were used to assess the accuracy between osteometric variables obtained from the dry skeletal elements and from CT images with and without soft tissues. An additional seven crania were scanned, measured by three observers, and the reliability was evaluated by technical error of measurement (TEM) and relative technical error of measurement (%TEM). Average percent differences between the measurements obtained from the three data sources ranged from 1.4% to 2.9%. Bland-Altman plots illustrated the two sets of measurements were generally within 2mm for each comparison between data sources. Intra-observer TEM and %TEM for three observers and all craniometric variables ranged between 0.46mm and 0.77mm and 0.56% and 1.06%, respectively. The three-way inter-observer TEM and %TEM for craniometric variables was 2.6mm and 2.26%, respectively. Variables that yielded high error rates were orbital height, orbital breadth, inter-orbital breadth and parietal chord. Overall, minimal differences were found among the

  8. Automated rose cutting in greenhouses with 3D vision and robotics : analysis of 3D vision techniques for stem detection

    OpenAIRE

    Noordam, J.C.; Hemming, J.; Heerde, van, P.; Golbach, F.B.T.F.; Soest, van, R.W.M.; Wekking, E.

    2005-01-01

    The reduction of labour cost is the major motivation to develop a system for robot harvesting of roses in greenhouses that at least can compete with manual harvesting. Due to overlapping leaves, one of the most complicated tasks in robotic rose cutting is to locate the stem and trace the stem down to locate the cutting position. Computer vision techniques like stereo imaging, laser triangulation, röntgen imaging and a new technique, called reverse volumetric intersection, are evaluated in thi...

  9. Evaluation of the durability of 3D printed keys produced by computational processing of image data

    Science.gov (United States)

    Straub, Jeremy; Kerlin, Scott

    2016-05-01

    Possession of a working 3D printed key can, for most practical purposes, convince observers that an illicit attempt to gain premises access is authorized. This paper seeks to assess three things. First, work has been performed to determine how easily the data for making models of keys can be obtained through manual measurement. It then presents work done to create a model of the key and determine how easy key modeling could be (particularly after a first key of a given key `blank' has been made). Finally, it seeks to assess the durability of the keys produced using 3D printing.

  10. Spatial and temporal analysis of DIII-D 3D magnetic diagnostic data

    Science.gov (United States)

    Strait, E. J.; King, J. D.; Hanson, J. M.; Logan, N. C.

    2016-11-01

    An extensive set of magnetic diagnostics in DIII-D is aimed at measuring non-axisymmetric "3D" features of tokamak plasmas, with typical amplitudes ˜10-3 to 10-5 of the total magnetic field. We describe hardware and software techniques used at DIII-D to condition the individual signals and analysis to estimate the spatial structure from an ensemble of discrete measurements. Applications of the analysis include detection of non-rotating MHD instabilities, plasma control, and validation of MHD stability and 3D equilibrium models.

  11. Statistical 2D and 3D shape analysis using Non-Euclidean Metrics

    DEFF Research Database (Denmark)

    Larsen, Rasmus; Hilger, Klaus Baggesen; Wrobel, Mark Christoph

    2002-01-01

    We address the problem of extracting meaningful, uncorrelated biological modes of variation from tangent space shape coordinates in 2D and 3D using non-Euclidean metrics. We adapt the maximum autocorrelation factor analysis and the minimum noise fraction transform to shape decomposition. Furtherm......We address the problem of extracting meaningful, uncorrelated biological modes of variation from tangent space shape coordinates in 2D and 3D using non-Euclidean metrics. We adapt the maximum autocorrelation factor analysis and the minimum noise fraction transform to shape decomposition...

  12. How computer science can help in understanding the 3D genome architecture.

    Science.gov (United States)

    Shavit, Yoli; Merelli, Ivan; Milanesi, Luciano; Lio', Pietro

    2016-09-01

    Chromosome conformation capture techniques are producing a huge amount of data about the architecture of our genome. These data can provide us with a better understanding of the events that induce critical regulations of the cellular function from small changes in the three-dimensional genome architecture. Generating a unified view of spatial, temporal, genetic and epigenetic properties poses various challenges of data analysis, visualization, integration and mining, as well as of high performance computing and big data management. Here, we describe the critical issues of this new branch of bioinformatics, oriented at the comprehension of the three-dimensional genome architecture, which we call 'Nucleome Bioinformatics', looking beyond the currently available tools and methods, and highlight yet unaddressed challenges and the potential approaches that could be applied for tackling them. Our review provides a map for researchers interested in using computer science for studying 'Nucleome Bioinformatics', to achieve a better understanding of the biological processes that occur inside the nucleus.

  13. 3D analysis of eddy current loss in the permanent magnet coupling

    Science.gov (United States)

    Zhu, Zina; Meng, Zhuo

    2016-07-01

    This paper first presents a 3D analytical model for analyzing the radial air-gap magnetic field between the inner and outer magnetic rotors of the permanent magnet couplings by using the Amperian current model. Based on the air-gap field analysis, the eddy current loss in the isolation cover is predicted according to the Maxwell's equations. A 3D finite element analysis model is constructed to analyze the magnetic field spatial distributions and vector eddy currents, and then the simulation results obtained are analyzed and compared with the analytical method. Finally, the current losses of two types of practical magnet couplings are measured in the experiment to compare with the theoretical results. It is concluded that the 3D analytical method of eddy current loss in the magnet coupling is viable and could be used for the eddy current loss prediction of magnet couplings.

  14. 3D Printing Meets Computational Astrophysics: Deciphering the Structure of Eta Carinae’s Colliding Winds Using 3D Prints of Smoothed Particle Hydrodynamics Simulations

    Science.gov (United States)

    Madura, Thomas; Gull, Theodore R.; Clementel, Nicola; Paardekooper, Jan-Pieter; Kruip, Chael; Corcoran, Michael F.; Hamaguchi, Kenji; Teodoro, Mairan

    2015-01-01

    We present the first 3D prints of output from a supercomputer simulation of a complex astrophysical system, the colliding stellar winds in the massive (>120 MSun), highly eccentric (e ~ 0.9) binary Eta Carinae. Using a consumer-grade 3D printer (Makerbot Replicator 2X), we successfully printed 3D smoothed particle hydrodynamics simulations of Eta Carinae's inner (r ~110 AU) wind-wind collision interface at multiple orbital phases. These 3D prints reveal important, previously unknown 'finger-like' structures at orbital phases shortly after periastron (φ ~1.045) that protrude radially outward from the spiral wind-wind collision region. We speculate that these fingers are related to instabilities (e.g. Rayleigh-Taylor) that arise at the interface between the radiatively-cooled layer of dense post-shock primary-star wind and the hot, adiabatic post-shock companion-star wind. The success of our work and easy identification of previously unknown physical features highlight the important role 3D printing can play in the visualization and understanding of complex 3D time-dependent numerical simulations of astrophysical phenomena.

  15. TBIEM3D: A Computer Program for Predicting Ducted Fan Engine Noise. Version 1.1

    Science.gov (United States)

    Dunn, M. H.

    1997-01-01

    This document describes the usage of the ducted fan noise prediction program TBIEM3D (Thin duct - Boundary Integral Equation Method - 3 Dimensional). A scattering approach is adopted in which the acoustic pressure field is split into known incident and unknown scattered parts. The scattering of fan-generated noise by a finite length circular cylinder in a uniform flow field is considered. The fan noise is modeled by a collection of spinning point thrust dipoles. The program, based on a Boundary Integral Equation Method (BIEM), calculates circumferential modal coefficients of the acoustic pressure at user-specified field locations. The duct interior can be of the hard wall type or lined. The duct liner is axisymmetric, locally reactive, and can be uniform or axially segmented. TBIEM3D is written in the FORTRAN programming language. Input to TBIEM3D is minimal and consists of geometric and kinematic parameters. Discretization and numerical parameters are determined automatically by the code. Several examples are presented to demonstrate TBIEM3D capabilities.

  16. Preliminary COM3D Analysis for H{sub 2} Combustion in the APR1400 Containment

    Energy Technology Data Exchange (ETDEWEB)

    Kang, Hyung Seok; Kim, Jongtae; Kim, Sang-Baik; Hong, Seong-Wan [Korea Atomic Energy Research Institute, Daejeon (Korea, Republic of)

    2015-10-15

    In order to assure the containment integrity of APR1400, it is necessary to evaluate an overpressure buildup resulting from a propagation of hydrogen flame along the structure and wall in the containment during a severe accident using the COM3D. Korea Atomic Energy Research Institute (KAERI) established a numerical analysis system for evaluating an overpressure buildup owing to a hydrogen combustion in the containment of a nuclear power plant by importing COM3D from KIT in Germany. The COM3D has been currently used in the simulations of the combustions and explosions, together with the system of industrial risk mitigation of hydrogen and burnable gases in nuclear containment and auxiliary buildings. KAERI performed the hydrogen combustion analysis using the COM3D code with the initial hydrogen distribution calculated by the GASFLOW under assumption of 85% metal-water reaction in the reactor vessel. From the COM3D results, we can know that the pressure buildup was about 100 kPa because the flame speed was not increased above 1000 m/s and the pressure wave passed through the open spaces in the large containment.

  17. Digital Curvatures Applied to 3D Object Analysis and Recognition: A Case Study

    CERN Document Server

    Chen, Li

    2009-01-01

    In this paper, we propose using curvatures in digital space for 3D object analysis and recognition. Since direct adjacency has only six types of digital surface points in local configurations, it is easy to determine and classify the discrete curvatures for every point on the boundary of a 3D object. Unlike the boundary simplicial decomposition (triangulation), the curvature can take any real value. It sometimes makes difficulties to find a right value for threshold. This paper focuses on the global properties of categorizing curvatures for small regions. We use both digital Gaussian curvatures and digital mean curvatures to 3D shapes. This paper proposes a multi-scale method for 3D object analysis and a vector method for 3D similarity classification. We use these methods for face recognition and shape classification. We have found that the Gaussian curvatures mainly describe the global features and average characteristics such as the five regions of a human face. However, mean curvatures can be used to find ...

  18. Multi-scale uncertainty and sensitivity analysis of the TALL-3D experiment using thermal-hydraulic coupled codes

    International Nuclear Information System (INIS)

    The simulation of complex thermal-hydraulic phenomena is a challenging task. On one hand Computational Fluid Dynamics (CFD) codes allow a fine resolution of 3D phenomena but have a computational cost which is still prohibitive for some applications. On the other hand, System Analysis codes are fast running but cannot account for 3D phenomena. The coupling of these two approaches provides a tool which combines their advantages. In the context of the European THINS Project (7th Framework Program) the Gesellschaft für Anlagen- und Reaktorsicherheit mbH (GRS) developed a coupling between ANSYS CFX and ATHLET. The validation of this coupled code is to be performed with the help of experimental data provided by KTH (Sweden), which has built the TALL-3D facility for this purpose. This facility investigates the transition from forced to natural circulation of the Lead-Bismuth Eutectic (LBE) in a pool connected to a 3-leg primary circuit with two heaters and a heat exchanger. TUM is responsible for the Uncertainty and Sensitivity Analysis (USA) of the coupled ATHLET-CFX simulations in the THINS Project. The influence of modeling uncertainty on the simulation results needs to be assessed because it can significantly impair their accuracy. USA is a powerful tool to assess the model output variability resulting from modeling uncertainty (Uncertainty Analysis) and to identify and rank the influential model input parameters (Sensitivity Analysis). TUM has developed a computational framework to propagate modeling uncertainty through coupled Systems AnalysisComputational Fluid Dynamics (CFD) codes. This framework is being applied to the simulation of the experiments performed on the TALL-3D facility. The uncertainty methodology used is based on the statistical sampling of the uncertain inputs and models used by the two codes, its propagation through coupled calculations, and the final processing of the output sample of variables of interest with non-parametric statistical

  19. 3D galaxy clustering with future wide-field surveys: Advantages of a spherical Fourier-Bessel analysis

    Science.gov (United States)

    Lanusse, F.; Rassat, A.; Starck, J.-L.

    2015-06-01

    Context. Upcoming spectroscopic galaxy surveys are extremely promising to help in addressing the major challenges of cosmology, in particular in understanding the nature of the dark universe. The strength of these surveys, naturally described in spherical geometry, comes from their unprecedented depth and width, but an optimal extraction of their three-dimensional information is of utmost importance to best constrain the properties of the dark universe. Aims: Although there is theoretical motivation and novel tools to explore these surveys using the 3D spherical Fourier-Bessel (SFB) power spectrum of galaxy number counts Cℓ(k,k'), most survey optimisations and forecasts are based on the tomographic spherical harmonics power spectrum C(ij)_ℓ. The goal of this paper is to perform a new investigation of the information that can be extracted from these two analyses in the context of planned stage IV wide-field galaxy surveys. Methods: We compared tomographic and 3D SFB techniques by comparing the forecast cosmological parameter constraints obtained from a Fisher analysis. The comparison was made possible by careful and coherent treatment of non-linear scales in the two analyses, which makes this study the first to compare 3D SFB and tomographic constraints on an equal footing. Nuisance parameters related to a scale- and redshift-dependent galaxy bias were also included in the computation of the 3D SFB and tomographic power spectra for the first time. Results: Tomographic and 3D SFB methods can recover similar constraints in the absence of systematics. This requires choosing an optimal number of redshift bins for the tomographic analysis, which we computed to be N = 26 for zmed ≃ 0.4, N = 30 for zmed ≃ 1.0, and N = 42 for zmed ≃ 1.7. When marginalising over nuisance parameters related to the galaxy bias, the forecast 3D SFB constraints are less affected by this source of systematics than the tomographic constraints. In addition, the rate of increase of the

  20. Lung nodule detection performance in five observers on computed tomography (CT) with adaptive iterative dose reduction using three-dimensional processing (AIDR 3D) in a Japanese multicenter study: Comparison between ultra-low-dose CT and low-dose CT by receiver-operating characteristic analysis

    Energy Technology Data Exchange (ETDEWEB)

    Nagatani, Yukihiro, E-mail: yatsushi@belle.shiga-med.ac.jp [Department of Radiology, Shiga University of Medical Science, Otsu 520-2192, Shiga (Japan); Takahashi, Masashi; Murata, Kiyoshi [Department of Radiology, Shiga University of Medical Science, Otsu 520-2192, Shiga (Japan); Ikeda, Mitsuru [Department of Radiological and Medical Laboratory Science, Nagoya University Graduate School of Medicine, Nagoya 461-8673, Aichi (Japan); Yamashiro, Tsuneo [Department of Radiology, Graduate School of Medical Science, University of the Ryukyus, Nishihara 903-0215, Okinawa (Japan); Miyara, Tetsuhiro [Department of Radiology, Graduate School of Medical Science, University of the Ryukyus, Nishihara 903-0215, Okinawa (Japan); Department of Radiology, Okinawa Prefectural Yaeyama Hospital, Ishigaki 907-0022, Okinawa (Japan); Koyama, Hisanobu [Department of Radiology, Kobe University Graduate School of Medicine, Kobe 650-0017, Hyogo (Japan); Koyama, Mitsuhiro [Department of Radiology, Osaka Medical College, Takatsuki 569-8686, Osaka (Japan); Sato, Yukihisa [Department of Radiology, Osaka University Graduate School of Medicine, Suita 565-0871, Osaka (Japan); Department of Radiology, Osaka Medical Center of Cancer and Cardiovascular Diseases, Osaka 537-8511, Osaka (Japan); Moriya, Hiroshi [Department of Radiology, Ohara General Hospital, Fukushima 960-8611 (Japan); Noma, Satoshi [Department of Radiology, Tenri Hospital, Tenri 632-8552, Nara (Japan); Tomiyama, Noriyuki [Department of Radiology, Osaka University Graduate School of Medicine, Suita 565-0871, Osaka (Japan); Ohno, Yoshiharu [Department of Radiology, Kobe University Graduate School of Medicine, Kobe 650-0017, Hyogo (Japan); Murayama, Sadayuki [Department of Radiology, Graduate School of Medical Science, University of the Ryukyus, Nishihara 903-0215, Okinawa (Japan)

    2015-07-15

    Highlights: • Using AIDR 3D, ULDCT showed comparable LND of solid nodules to LDCT. • Using AIDR 3D, LND of smaller GGN in ULDCT was inferior to that in LDCT. • Effective dose in ULDCT was about only twice of that in chest X-ray. • BMI values in study population were mostly in the normal range body habitus. - Abstract: Purpose: To compare lung nodule detection performance (LNDP) in computed tomography (CT) with adaptive iterative dose reduction using three dimensional processing (AIDR3D) between ultra-low dose CT (ULDCT) and low dose CT (LDCT). Materials and methods: This was part of the Area-detector Computed Tomography for the Investigation of Thoracic Diseases (ACTIve) Study, a multicenter research project being conducted in Japan. Institutional Review Board approved this study and informed consent was obtained. Eighty-three subjects (body mass index, 23.3 ± 3.2) underwent chest CT at 6 institutions using identical scanners and protocols. In a single visit, each subject was scanned using different tube currents: 240, 120 and 20 mA (3.52, 1.74 and 0.29 mSv, respectively). Axial CT images with 2-mm thickness/increment were reconstructed using AIDR3D. Standard of reference (SOR) was determined based on CT images at 240 mA by consensus reading of 2 board-certificated radiologists as to the presence of lung nodules with the longest diameter (LD) of more than 3 mm. Another 5 radiologists independently assessed and recorded presence/absence of lung nodules and their locations by continuously-distributed rating in CT images at 20 mA (ULDCT) and 120 mA (LDCT). Receiver-operating characteristic (ROC) analysis was used to evaluate LNDP of both methods in total and also in subgroups classified by LD (>4, 6 and 8 mm) and nodular characteristics (solid and ground glass nodules). Results: For SOR, 161 solid and 60 ground glass nodules were identified. No significant difference in LNDP for entire solid nodules was demonstrated between both methods, as area under ROC

  1. Lung nodule detection performance in five observers on computed tomography (CT) with adaptive iterative dose reduction using three-dimensional processing (AIDR 3D) in a Japanese multicenter study: Comparison between ultra-low-dose CT and low-dose CT by receiver-operating characteristic analysis

    International Nuclear Information System (INIS)

    Highlights: • Using AIDR 3D, ULDCT showed comparable LND of solid nodules to LDCT. • Using AIDR 3D, LND of smaller GGN in ULDCT was inferior to that in LDCT. • Effective dose in ULDCT was about only twice of that in chest X-ray. • BMI values in study population were mostly in the normal range body habitus. - Abstract: Purpose: To compare lung nodule detection performance (LNDP) in computed tomography (CT) with adaptive iterative dose reduction using three dimensional processing (AIDR3D) between ultra-low dose CT (ULDCT) and low dose CT (LDCT). Materials and methods: This was part of the Area-detector Computed Tomography for the Investigation of Thoracic Diseases (ACTIve) Study, a multicenter research project being conducted in Japan. Institutional Review Board approved this study and informed consent was obtained. Eighty-three subjects (body mass index, 23.3 ± 3.2) underwent chest CT at 6 institutions using identical scanners and protocols. In a single visit, each subject was scanned using different tube currents: 240, 120 and 20 mA (3.52, 1.74 and 0.29 mSv, respectively). Axial CT images with 2-mm thickness/increment were reconstructed using AIDR3D. Standard of reference (SOR) was determined based on CT images at 240 mA by consensus reading of 2 board-certificated radiologists as to the presence of lung nodules with the longest diameter (LD) of more than 3 mm. Another 5 radiologists independently assessed and recorded presence/absence of lung nodules and their locations by continuously-distributed rating in CT images at 20 mA (ULDCT) and 120 mA (LDCT). Receiver-operating characteristic (ROC) analysis was used to evaluate LNDP of both methods in total and also in subgroups classified by LD (>4, 6 and 8 mm) and nodular characteristics (solid and ground glass nodules). Results: For SOR, 161 solid and 60 ground glass nodules were identified. No significant difference in LNDP for entire solid nodules was demonstrated between both methods, as area under ROC

  2. Computer system to manage information rigs by 3D electronic models; Sistema computacional para administrar la informacion de plataformas petroleras mediante modelos electronicos 3D

    Energy Technology Data Exchange (ETDEWEB)

    Vazquez Bustos, Jesus; Segura Ozuna, Victor Octavio [Instituto de Investigaciones Electricas, Cuernavaca, Morelos (Mexico)

    2012-06-22

    The evolution and incorporation of new hardware technologies, as well as recent advances in computer systems have enabled the development of applications of computer aided design of most complete scope, such as those used for the design of industrial process plants. This article describes a software system developed to complement the capabilities of one of these systems for the design of process plants. A 3D electronic model is generated through the user interface of the design system that at the same time gives the user the ability to generate, publish, review and control the engineering document that are generated during the entire life cycle of a marine oil platform, a very particular type of industrial process plant. This way, the user obtains not only a tool for the design of an industrial plant, but also a system for managing information and engineering documents that are developed. This allows the user to do a more efficient job by putting at his disposal and in the same system, all documents and information required to perform his duty. [Spanish] La evolucion e incorporacion de nuevas tecnologias de hardware, junto con los avances recientes en sistemas de computo ha permitido el desarrollo de aplicaciones de interesante diseno de computo de mayor alcance, tales como los que se emplean en las plantas de procesos industriales. Este articulo describe un sistema de software desarrollado para complementar las capacidades de uno de estos sistemas para el diseno de proceso. Un modelo electronico se genera por medio de la interfaz de usuario del sistema de diseno, que al mismo tiempo da al usuario la capacidad para crear, publicar, revisar y controlar los documentos de ingenieria que se producen durante el ciclo de vida completo de una plataforma marina petrolera, un tipo muy particular de planta de proceso industrial. De este modo, el usuario no solo obtiene una herramienta para el diseno de una planta industrial, sino tambien un sistema para manejar informacion y

  3. Generating 3D anatomically detailed models of the retina from OCT data sets: implications for computational modelling

    Science.gov (United States)

    Shalbaf, Farzaneh; Dokos, Socrates; Lovell, Nigel H.; Turuwhenua, Jason; Vaghefi, Ehsan

    2015-12-01

    Retinal prosthesis has been proposed to restore vision for those suffering from the retinal pathologies that mainly affect the photoreceptors layer but keep the inner retina intact. Prior to costly risky experimental studies computational modelling of the retina will help to optimize the device parameters and enhance the outcomes. Here, we developed an anatomically detailed computational model of the retina based on OCT data sets. The consecutive OCT images of individual were subsequently segmented to provide a 3D representation of retina in the form of finite elements. Thereafter, the electrical properties of the retina were modelled by implementing partial differential equation on the 3D mesh. Different electrode configurations, that is bipolar and hexapolar configurations, were implemented and the results were compared with the previous computational and experimental studies. Furthermore, the possible effects of the curvature of retinal layers on the current steering through the retina were proposed and linked to the clinical observations.

  4. Micromechanical analysis of nanocomposites using 3D voxel based material model

    DEFF Research Database (Denmark)

    Mishnaevsky, Leon

    2012-01-01

    A computational study on the effect of nanocomposite structures on the elastic properties is carried out with the use of the 3D voxel based model of materials and the combined Voigt–Reuss method. A hierarchical voxel based model of a material reinforced by an array of exfoliated and intercalated ...... of glass fibers in hybrid (hierarchical) composites, using the micromechanical voxel-based model of nanocomposites, it was observed that the nanoreinforcement in the matrix leads to slightly lower fiber failure probability....

  5. A 3D multilevel model of damage and strength of wood: Analysis of microstructural effects

    DEFF Research Database (Denmark)

    Qing, Hai; Mishnaevsky, Leon

    2011-01-01

    A 3D hierarchical computational model of damage and strength of wood is developed. The model takes into account the four scale microstructures of wood, including the microfibril reinforced structure at nanoscale, multilayered cell walls at microscale, hexagon-shape-tube cellular structure...... arrangements and cellulose strength distributions on the tensile strength of wood is studied numerically. Good agreement of the theoretical results with experimental data has been obtained....

  6. Computer-aided multiple-head 3D printing system for printing of heterogeneous organ/tissue constructs

    Science.gov (United States)

    Jung, Jin Woo; Lee, Jung-Seob; Cho, Dong-Woo

    2016-02-01

    Recently, much attention has focused on replacement or/and enhancement of biological tissues via the use of cell-laden hydrogel scaffolds with an architecture that mimics the tissue matrix, and with the desired three-dimensional (3D) external geometry. However, mimicking the heterogeneous tissues that most organs and tissues are formed of is challenging. Although multiple-head 3D printing systems have been proposed for fabricating heterogeneous cell-laden hydrogel scaffolds, to date only the simple exterior form has been realized. Here we describe a computer-aided design and manufacturing (CAD/CAM) system for this application. We aim to develop an algorithm to enable easy, intuitive design and fabrication of a heterogeneous cell-laden hydrogel scaffolds with a free-form 3D geometry. The printing paths of the scaffold are automatically generated from the 3D CAD model, and the scaffold is then printed by dispensing four materials; i.e., a frame, two kinds of cell-laden hydrogel and a support. We demonstrated printing of heterogeneous tissue models formed of hydrogel scaffolds using this approach, including the outer ear, kidney and tooth tissue. These results indicate that this approach is particularly promising for tissue engineering and 3D printing applications to regenerate heterogeneous organs and tissues with tailored geometries to treat specific defects or injuries.

  7. Use of micro computed-tomography and 3D printing for reverse engineering of mouse embryo nasal capsule

    International Nuclear Information System (INIS)

    Imaging of increasingly complex cartilage in vertebrate embryos is one of the key tasks of developmental biology. This is especially important to study shape-organizing processes during initial skeletal formation and growth. Advanced imaging techniques that are reflecting biological needs give a powerful impulse to push the boundaries of biological visualization. Recently, techniques for contrasting tissues and organs have improved considerably, extending traditional 2D imaging approaches to 3D . X-ray micro computed tomography (μCT), which allows 3D imaging of biological objects including their internal structures with a resolution in the micrometer range, in combination with contrasting techniques seems to be the most suitable approach for non-destructive imaging of embryonic developing cartilage. Despite there are many software-based ways for visualization of 3D data sets, having a real solid model of the studied object might give novel opportunities to fully understand the shape-organizing processes in the developing body. In this feasibility study we demonstrated the full procedure of creating a real 3D object of mouse embryo nasal capsule, i.e. the staining, the μCT scanning combined by the advanced data processing and the 3D printing

  8. A computational model that recovers the 3D shape of an object from a single 2D retinal representation.

    Science.gov (United States)

    Li, Yunfeng; Pizlo, Zygmunt; Steinman, Robert M

    2009-05-01

    Human beings perceive 3D shapes veridically, but the underlying mechanisms remain unknown. The problem of producing veridical shape percepts is computationally difficult because the 3D shapes have to be recovered from 2D retinal images. This paper describes a new model, based on a regularization approach, that does this very well. It uses a new simplicity principle composed of four shape constraints: viz., symmetry, planarity, maximum compactness and minimum surface. Maximum compactness and minimum surface have never been used before. The model was tested with random symmetrical polyhedra. It recovered their 3D shapes from a single randomly-chosen 2D image. Neither learning, nor depth perception, was required. The effectiveness of the maximum compactness and the minimum surface constraints were measured by how well the aspect ratio of the 3D shapes was recovered. These constraints were effective; they recovered the aspect ratio of the 3D shapes very well. Aspect ratios recovered by the model were compared to aspect ratios adjusted by four human observers. They also adjusted aspect ratios very well. In those rare cases, in which the human observers showed large errors in adjusted aspect ratios, their errors were very similar to the errors made by the model. PMID:18621410

  9. Identification and classification in le fort type fractures by using 2D and 3D computed tomography

    Institute of Scientific and Technical Information of China (English)

    CHEN We-jian; YANG Yun-jun; FANG Yi-ming; XU Fang-hong; ZHANG Lin; CAO Guo-quan

    2006-01-01

    Objective:To evaluate the usefulness of twodimensional (2D) and three-dimensional (3D) computed tomography (CT) in the identification and classification of Le Fort type fractures.Methods: Sixty-two patients with different types of Le Fort fractures underwent CT scanning and 3D-CT reconstruction. The data were analyzed by multiplanar reconstruction (MPR), surface shaded display (SSD) and volume rendering (VR) respectively.Results: The patients with Le Fort Ⅰ , Le Fort Ⅱfracture and Le Fort Ⅲ fracture accounted for 16.1%,14.5 % and 12.9 % respectively. The compound fractures were the most common type and accounted for 56.5 % ( n =35, 18 cases with Le Fort Ⅰ + Ⅱ fracture, 10 cases with Le Fort Ⅱ + Ⅲ fracture and 7 cases with Le Fort Ⅰ + Ⅱ + Ⅲfracture). Fifty-five cases coexisted with other fractures in maxillofacial region. 2D-CT could be used to define the tiny fractures and the deep-structure fractures more accurately compared with 3D-CT, but the real impression of Le Fort type fractures could not be correctly evaluated on 2D-CT.3D-CT could clearly demonstrate the whole shape of Le Fort type fractures and identify the classification of Le Fort fractures.Conclusions: 3D-CT is the best imaging method for the diagnosis of Le Fort type fractures and can provide valuable information of space relationship, especially for the design of treatment plan before operation.

  10. Use of micro computed-tomography and 3D printing for reverse engineering of mouse embryo nasal capsule

    Science.gov (United States)

    Tesařová, M.; Zikmund, T.; Kaucká, M.; Adameyko, I.; Jaroš, J.; Paloušek, D.; Škaroupka, D.; Kaiser, J.

    2016-03-01

    Imaging of increasingly complex cartilage in vertebrate embryos is one of the key tasks of developmental biology. This is especially important to study shape-organizing processes during initial skeletal formation and growth. Advanced imaging techniques that are reflecting biological needs give a powerful impulse to push the boundaries of biological visualization. Recently, techniques for contrasting tissues and organs have improved considerably, extending traditional 2D imaging approaches to 3D . X-ray micro computed tomography (μCT), which allows 3D imaging of biological objects including their internal structures with a resolution in the micrometer range, in combination with contrasting techniques seems to be the most suitable approach for non-destructive imaging of embryonic developing cartilage. Despite there are many software-based ways for visualization of 3D data sets, having a real solid model of the studied object might give novel opportunities to fully understand the shape-organizing processes in the developing body. In this feasibility study we demonstrated the full procedure of creating a real 3D object of mouse embryo nasal capsule, i.e. the staining, the μCT scanning combined by the advanced data processing and the 3D printing.

  11. Computer-aided multiple-head 3D printing system for printing of heterogeneous organ/tissue constructs.

    Science.gov (United States)

    Jung, Jin Woo; Lee, Jung-Seob; Cho, Dong-Woo

    2016-02-22

    Recently, much attention has focused on replacement or/and enhancement of biological tissues via the use of cell-laden hydrogel scaffolds with an architecture that mimics the tissue matrix, and with the desired three-dimensional (3D) external geometry. However, mimicking the heterogeneous tissues that most organs and tissues are formed of is challenging. Although multiple-head 3D printing systems have been proposed for fabricating heterogeneous cell-laden hydrogel scaffolds, to date only the simple exterior form has been realized. Here we describe a computer-aided design and manufacturing (CAD/CAM) system for this application. We aim to develop an algorithm to enable easy, intuitive design and fabrication of a heterogeneous cell-laden hydrogel scaffolds with a free-form 3D geometry. The printing paths of the scaffold are automatically generated from the 3D CAD model, and the scaffold is then printed by dispensing four materials; i.e., a frame, two kinds of cell-laden hydrogel and a support. We demonstrated printing of heterogeneous tissue models formed of hydrogel scaffolds using this approach, including the outer ear, kidney and tooth tissue. These results indicate that this approach is particularly promising for tissue engineering and 3D printing applications to regenerate heterogeneous organs and tissues with tailored geometries to treat specific defects or injuries.

  12. CCTV Coverage Index Based on Surveillance Resolution and Its Evaluation Using 3D Spatial Analysis

    Directory of Open Access Journals (Sweden)

    Kyoungah Choi

    2015-09-01

    Full Text Available We propose a novel approach to evaluating how effectively a closed circuit television (CCTV system can monitor a targeted area. With 3D models of the target area and the camera parameters of the CCTV system, the approach produces surveillance coverage index, which is newly defined in this study as a quantitative measure for surveillance performance. This index indicates the proportion of the space being monitored with a sufficient resolution to the entire space of the target area. It is determined by computing surveillance resolution at every position and orientation, which indicates how closely a specific object can be monitored with a CCTV system. We present full mathematical derivation for the resolution, which depends on the location and orientation of the object as well as the geometric model of a camera. With the proposed approach, we quantitatively evaluated the surveillance coverage of a CCTV system in an underground parking area. Our evaluation process provided various quantitative-analysis results, compelling us to examine the design of the CCTV system prior to its installation and understand the surveillance capability of an existing CCTV system.

  13. Using the RELAP5-3D advanced systems analysis code with commercial and advanced CFD software

    International Nuclear Information System (INIS)

    The Idaho National Engineering and Environmental Laboratory (INEEL), in conjunction with Fluent Corporation, has developed a new analysis tool by coupling the Fluent computational fluid dynamics (CFD) code to the RELAP5-3D/ATHENA advanced thermal-hydraulic analysis code. This tool enables researchers to perform detailed, three-dimensional analyses using Fluent's CFD capability while the boundary conditions required by the Fluent calculation are provided by the balance-of-system model created using RELAP5-3D/ATHENA. Both steady-state and transient calculations can be performed using many working fluids and also point to three-dimensional neutronics. The Fluent/RELAP5-3D coupled code is intended as a state-of-the-art tool to study the behavior of systems with single-phase working fluids, such as advanced gas-cooled reactors. For systems with two-phase working fluids, particularly during loss-of-coolant accident (LOCA) scenarios where a multitude of flow regimes, heat transfer regimes, and phenomena are present, the Fluent-RELAP5-3D coupling will have less general applicability since Fluent's capabilities to analyze global two-phase problems are limited. Consequently, for two-phase advanced reactor analysis, INEEL plans to employ not only the Fluent-RELAP5-3D coupling, but also to make use of state-of-the-art experimental CFD tools such as CFDLib (available from the Los Alamos National Laboratory). A general description of the techniques used to couple the codes is given. A summary of the process used to checkout the coupled configuration is given. A demonstration calculation is presented. Finally, future tasks and plans are outlined. (author)

  14. Application of COREMELT-3D code at analysis of severe fast reactor accidents

    International Nuclear Information System (INIS)

    The code COREMELT for calculations of initial and transition stages of severe accident is considered. It is used to conduct connected calculations of nonstationary neutronic and thermohydraulic processes in sodium fast reactor core. The code has some versions depending on dimensions of solving problem and consists of thermohydraulic module COREMELT and neutronic module RADAR. Using the code COREMELT-3D connected calculations of core disassembly accidents of ULOF and UTOP type have been conducted for sodium fast reactors safety analysis. The main problem of code COREMELT-3D use is duration of calculation, speeding of the code is possible when calculating algorithms are parallelized

  15. New technologies of 2-D and 3-D modeling for analysis and management of natural resources

    Science.gov (United States)

    Cheremisina, E. N.; Lyubimova, A. V.; Kirpicheva, E. Yu.

    2016-09-01

    For ensuring technological support of research and administrative activity in the sphere of environmental management a specialized modular program complex was developed. The special attention in developing a program complex is focused to creation of convenient and effective tools for creation and visualization 2d and 3D models providing the solution of tasks of the analysis and management of natural resources.

  16. Open Plot Project: an open-source toolkit for 3-D structural data analysis

    Directory of Open Access Journals (Sweden)

    S. Tavani

    2011-05-01

    Full Text Available In this work we present the Open Plot Project, an open-source software for structural data analysis, including a 3-D environment. The software includes many classical functionalities of structural data analysis tools, like stereoplot, contouring, tensorial regression, scatterplots, histograms and transect analysis. In addition, efficient filtering tools are present allowing the selection of data according to their attributes, including spatial distribution and orientation. This first alpha release represents a stand-alone toolkit for structural data analysis.

    The presence of a 3-D environment with digitalising tools allows the integration of structural data with information extracted from georeferenced images to produce structurally validated dip domains. This, coupled with many import/export facilities, allows easy incorporation of structural analyses in workflows for 3-D geological modelling. Accordingly, Open Plot Project also candidates as a structural add-on for 3-D geological modelling software.

    The software (for both Windows and Linux O.S., the User Manual, a set of example movies (complementary to the User Manual, and the source code are provided as Supplement. We intend the publication of the source code to set the foundation for free, public software that, hopefully, the structural geologists' community will use, modify, and implement. The creation of additional public controls/tools is strongly encouraged.

  17. Exploring 2D/3D input techniques for medical image analysis

    NARCIS (Netherlands)

    E.V. Zudilova-Seinstra; P.M.A. Sloot; P.J.H. de Koning; A. Suinesiaputra; R.J. van der Geest; J.H.C. Reiber

    2009-01-01

    We describe a series of experiments that compared the 2D and 3D input methods for selection and positioning tasks related to medical image analysis. For this study, we chose a switchable P5 glove controller, which can be used to provide both 2DOF and 6DOF input control. Our results suggest that for

  18. Evaluation of 2D and 3D glove input applied to medical image analysis

    NARCIS (Netherlands)

    E.V. Zudilova-Seinstra; P.J.H. de Koning; A. Suinesiaputra; B.W. van Schooten; R.J. van der Geest; J.H.C. Reiber; P.M.A. Sloot

    2010-01-01

    We describe a series of experiments that compared 2D/3D input methods for selection and positioning tasks related to medical image analysis. For our study, we chose a switchable P5 Glove Controller, which can be used to provide both 2DOF and 6DOF input control. Our results suggest that for both task

  19. A 3-D model of superfluid helium suitable for numerical analysis

    CERN Document Server

    Darve, C; Van Sciver, S W

    2009-01-01

    The two-fluid description is a very successful phenomenological representation of the properties of Helium II. A 3-D model suitable for numerical analysis based on the Landau-Khalatnikov description of Helium II is proposed. In this paper we introduce a system of partial differential equations that is both complete and consistent as well as practical, to be used for a 3-D solution of the flow of Helium II. The development of a 3-D numerical model for Helium II is motivated by the need to validate experimental results obtained by observing the normal component velocity distribution in a Helium II thermal counter-flow using the Particle Image Velocimetry (PIV) technique.

  20. Finite element analysis of 3D elastic-plastic frictional contact problem for Cosserat materials

    Science.gov (United States)

    Zhang, S.; Xie, Z. Q.; Chen, B. S.; Zhang, H. W.

    2013-06-01

    The objective of this paper is to develop a finite element model for 3D elastic-plastic frictional contact problem of Cosserat materials. Because 3D elastic-plastic frictional contact problems belong to the unspecified boundary problems with nonlinearities in both material and geometric forms, a large number of calculations are needed to obtain numerical results with high accuracy. Based on the parametric variational principle and the corresponding quadratic programming method for numerical simulation of frictional contact problems, a finite element model is developed for 3D elastic-plastic frictional contact analysis of Cosserat materials. The problems are finally reduced to linear complementarity problems (LCP). Numerical examples show the feasibility and importance of the developed model for analyzing the contact problems of structures with materials which have micro-polar characteristics.

  1. A Real-Time Magnetoencephalography Brain-Computer Interface Using Interactive 3D Visualization and the Hadoop Ecosystem

    Science.gov (United States)

    McClay, Wilbert A.; Yadav, Nancy; Ozbek, Yusuf; Haas, Andy; Attias, Hagaii T.; Nagarajan, Srikantan S.

    2015-01-01

    Ecumenically, the fastest growing segment of Big Data is human biology-related data and the annual data creation is on the order of zetabytes. The implications are global across industries, of which the treatment of brain related illnesses and trauma could see the most significant and immediate effects. The next generation of health care IT and sensory devices are acquiring and storing massive amounts of patient related data. An innovative Brain-Computer Interface (BCI) for interactive 3D visualization is presented utilizing the Hadoop Ecosystem for data analysis and storage. The BCI is an implementation of Bayesian factor analysis algorithms that can distinguish distinct thought actions using magneto encephalographic (MEG) brain signals. We have collected data on five subjects yielding 90% positive performance in MEG mid- and post-movement activity. We describe a driver that substitutes the actions of the BCI as mouse button presses for real-time use in visual simulations. This process has been added into a flight visualization demonstration. By thinking left or right, the user experiences the aircraft turning in the chosen direction. The driver components of the BCI can be compiled into any software and substitute a user’s intent for specific keyboard strikes or mouse button presses. The BCI’s data analytics of a subject’s MEG brainwaves and flight visualization performance are stored and analyzed using the Hadoop Ecosystem as a quick retrieval data warehouse. PMID:26437432

  2. A Real-Time Magnetoencephalography Brain-Computer Interface Using Interactive 3D Visualization and the Hadoop Ecosystem.

    Science.gov (United States)

    McClay, Wilbert A; Yadav, Nancy; Ozbek, Yusuf; Haas, Andy; Attias, Hagaii T; Nagarajan, Srikantan S

    2015-01-01

    Ecumenically, the fastest growing segment of Big Data is human biology-related data and the annual data creation is on the order of zetabytes. The implications are global across industries, of which the treatment of brain related illnesses and trauma could see the most significant and immediate effects. The next generation of health care IT and sensory devices are acquiring and storing massive amounts of patient related data. An innovative Brain-Computer Interface (BCI) for interactive 3D visualization is presented utilizing the Hadoop Ecosystem for data analysis and storage. The BCI is an implementation of Bayesian factor analysis algorithms that can distinguish distinct thought actions using magneto encephalographic (MEG) brain signals. We have collected data on five subjects yielding 90% positive performance in MEG mid- and post-movement activity. We describe a driver that substitutes the actions of the BCI as mouse button presses for real-time use in visual simulations. This process has been added into a flight visualization demonstration. By thinking left or right, the user experiences the aircraft turning in the chosen direction. The driver components of the BCI can be compiled into any software and substitute a user's intent for specific keyboard strikes or mouse button presses. The BCI's data analytics OPEN ACCESS Brain. Sci. 2015, 5 420 of a subject's MEG brainwaves and flight visualization performance are stored and analyzed using the Hadoop Ecosystem as a quick retrieval data warehouse. PMID:26437432

  3. A Real-Time Magnetoencephalography Brain-Computer Interface Using Interactive 3D Visualization and the Hadoop Ecosystem

    Directory of Open Access Journals (Sweden)

    Wilbert A. McClay

    2015-09-01

    Full Text Available Ecumenically, the fastest growing segment of Big Data is human biology-related data and the annual data creation is on the order of zetabytes. The implications are global across industries, of which the treatment of brain related illnesses and trauma could see the most significant and immediate effects. The next generation of health care IT and sensory devices are acquiring and storing massive amounts of patient related data. An innovative Brain-Computer Interface (BCI for interactive 3D visualization is presented utilizing the Hadoop Ecosystem for data analysis and storage. The BCI is an implementation of Bayesian factor analysis algorithms that can distinguish distinct thought actions using magneto encephalographic (MEG brain signals. We have collected data on five subjects yielding 90% positive performance in MEG mid- and post-movement activity. We describe a driver that substitutes the actions of the BCI as mouse button presses for real-time use in visual simulations. This process has been added into a flight visualization demonstration. By thinking left or right, the user experiences the aircraft turning in the chosen direction. The driver components of the BCI can be compiled into any software and substitute a user’s intent for specific keyboard strikes or mouse button presses. The BCI’s data analytics OPEN ACCESS Brain. Sci. 2015, 5 420 of a subject’s MEG brainwaves and flight visualization performance are stored and analyzed using the Hadoop Ecosystem as a quick retrieval data warehouse.

  4. A Real-Time Magnetoencephalography Brain-Computer Interface Using Interactive 3D Visualization and the Hadoop Ecosystem.

    Science.gov (United States)

    McClay, Wilbert A; Yadav, Nancy; Ozbek, Yusuf; Haas, Andy; Attias, Hagaii T; Nagarajan, Srikantan S

    2015-09-30

    Ecumenically, the fastest growing segment of Big Data is human biology-related data and the annual data creation is on the order of zetabytes. The implications are global across industries, of which the treatment of brain related illnesses and trauma could see the most significant and immediate effects. The next generation of health care IT and sensory devices are acquiring and storing massive amounts of patient related data. An innovative Brain-Computer Interface (BCI) for interactive 3D visualization is presented utilizing the Hadoop Ecosystem for data analysis and storage. The BCI is an implementation of Bayesian factor analysis algorithms that can distinguish distinct thought actions using magneto encephalographic (MEG) brain signals. We have collected data on five subjects yielding 90% positive performance in MEG mid- and post-movement activity. We describe a driver that substitutes the actions of the BCI as mouse button presses for real-time use in visual simulations. This process has been added into a flight visualization demonstration. By thinking left or right, the user experiences the aircraft turning in the chosen direction. The driver components of the BCI can be compiled into any software and substitute a user's intent for specific keyboard strikes or mouse button presses. The BCI's data analytics OPEN ACCESS Brain. Sci. 2015, 5 420 of a subject's MEG brainwaves and flight visualization performance are stored and analyzed using the Hadoop Ecosystem as a quick retrieval data warehouse.

  5. Computational Approach in Formulating Mechanical Characteristics of 3D Star Honeycomb Auxetic Structure

    Directory of Open Access Journals (Sweden)

    Mozafar Shokri Rad

    2015-01-01

    Full Text Available Auxetic materials exhibit a unique characteristic due to the altered microstructure. Different structures have been used to model these materials. This paper treats a development of finite element model and theoretical formulation of 3D star honeycomb structure of these materials. Various shape parameters of the structural cell were evaluated with respect to the basic mechanical properties of the cell. Finite element and analytical approach for various geometrical parameters were numerically used to formulate the characteristics of the material. The study aims at quantifying mechanical properties for any domain in which auxetic material is of interest for variations in geometrical parameters. It is evident that mechanical properties of the material could be controlled by changing the base wall angle of the configuration. The primary outcome of the study is a design guideline for the use of 3D star honeycomb auxetic cellular structure in structural applications.

  6. The robot's vista space : a computational 3D scene analysis

    OpenAIRE

    Swadzba, Agnes

    2011-01-01

    The space that can be explored quickly from a fixed view point without locomotion is known as the vista space. In indoor environments single rooms and room parts follow this definition. The vista space plays an important role in situations with agent-agent interaction as it is the directly surrounding environment in which the interaction takes place. A collaborative interaction of the partners in and with the environment requires that both partners know where they are, what spatial structures...

  7. Reliability of clinically relevant 3D foot bone angles from quantitative computed tomography

    OpenAIRE

    Gutekunst, David J; Liu, Lu; Ju, Tao; Prior, Fred W.; Sinacore, David R

    2013-01-01

    Background Surgical treatment and clinical management of foot pathology requires accurate, reliable assessment of foot deformities. Foot and ankle deformities are multi-planar and therefore difficult to quantify by standard radiographs. Three-dimensional (3D) imaging modalities have been used to define bone orientations using inertial axes based on bone shape, but these inertial axes can fail to mimic established bone angles used in orthopaedics and clinical biomechanics. To provide improved ...

  8. KNOW-BLADE task-3.3 report. Rotor blade computations with 3D vortex generators

    Energy Technology Data Exchange (ETDEWEB)

    Johansen, J.; Soerensen, N.N.; Reck, M. (and others)

    2005-01-01

    The present report describes the work done in work package WP3.3: Aerodynamic Accessories in 3D in the EC project KNOW-BLADE. Vortex generators (VGs) are modelled in 3D Navier-Stokes solvers and applied on the flow around an airfoil and a wind turbine blade. Three test cases have been investigated. They are: 1) A non-rotating airfoil section with VGs. 2) A rotating airfoil section with VGs. 3) A non-rotating wind turbine blade with VGs. The airfoil section was the FFA-W3-241 airfoil, which has been measured in the VELUX wind tunnel with and without VGs placed at different chord wise positions. Three of the partners have modelled the airfoil section as a thin airfoil section with symmetry boundary conditions in the span wise direction to simulate an array of VGs. The wind turbine blade is the LM19.1 blade equipped with one pair of VGs placed at radius = 8.5 m. In general all partners have successfully modelled vortex generators in 3D, which eventually generates vortices and mixes the boundary layer. A large effort has been on generating the numerical meshes since this is a relatively complex configuration and a large variation of length and time scales is present. Even though the quantitative agreement with measurements is not acceptable the effort spend in the present project indicate that it is possible to investigate the effect of vortex generators on wind turbine blades using 3D Navier-Stokes solvers. Much further work within independence of mesh resolution and time step as well as turbulence modelling has to be carried out in future projects before parametric variations can be investigated. (au)

  9. 2D fluid model analysis for the effect of 3D gas flow on a capacitively coupled plasma deposition reactor

    Science.gov (United States)

    Kim, Ho Jun; Lee, Hae June

    2016-06-01

    The wide applicability of capacitively coupled plasma (CCP) deposition has increased the interest in developing comprehensive numerical models, but CCP imposes a tremendous computational cost when conducting a transient analysis in a three-dimensional (3D) model which reflects the real geometry of reactors. In particular, the detailed flow features of reactive gases induced by 3D geometric effects need to be considered for the precise calculation of radical distribution of reactive species. Thus, an alternative inclusive method for the numerical simulation of CCP deposition is proposed to simulate a two-dimensional (2D) CCP model based on the 3D gas flow results by simulating flow, temperature, and species fields in a 3D space at first without calculating the plasma chemistry. A numerical study of a cylindrical showerhead-electrode CCP reactor was conducted for particular cases of SiH4/NH3/N2/He gas mixture to deposit a hydrogenated silicon nitride (SiN x H y ) film. The proposed methodology produces numerical results for a 300 mm wafer deposition reactor which agree very well with the deposition rate profile measured experimentally along the wafer radius.

  10. A Pipeline for 3D Multimodality Image Integration and Computer-assisted Planning in Epilepsy Surgery.

    Science.gov (United States)

    Nowell, Mark; Rodionov, Roman; Zombori, Gergely; Sparks, Rachel; Rizzi, Michele; Ourselin, Sebastien; Miserocchi, Anna; McEvoy, Andrew; Duncan, John

    2016-01-01

    Epilepsy surgery is challenging and the use of 3D multimodality image integration (3DMMI) to aid presurgical planning is well-established. Multimodality image integration can be technically demanding, and is underutilised in clinical practice. We have developed a single software platform for image integration, 3D visualization and surgical planning. Here, our pipeline is described in step-by-step fashion, starting with image acquisition, proceeding through image co-registration, manual segmentation, brain and vessel extraction, 3D visualization and manual planning of stereoEEG (SEEG) implantations. With dissemination of the software this pipeline can be reproduced in other centres, allowing other groups to benefit from 3DMMI. We also describe the use of an automated, multi-trajectory planner to generate stereoEEG implantation plans. Preliminary studies suggest this is a rapid, safe and efficacious adjunct for planning SEEG implantations. Finally, a simple solution for the export of plans and models to commercial neuronavigation systems for implementation of plans in the operating theater is described. This software is a valuable tool that can support clinical decision making throughout the epilepsy surgery pathway.

  11. A Pipeline for 3D Multimodality Image Integration and Computer-assisted Planning in Epilepsy Surgery

    Science.gov (United States)

    Nowell, Mark; Rodionov, Roman; Zombori, Gergely; Sparks, Rachel; Rizzi, Michele; Ourselin, Sebastien; Miserocchi, Anna; McEvoy, Andrew; Duncan, John

    2016-01-01

    Epilepsy surgery is challenging and the use of 3D multimodality image integration (3DMMI) to aid presurgical planning is well-established. Multimodality image integration can be technically demanding, and is underutilised in clinical practice. We have developed a single software platform for image integration, 3D visualization and surgical planning. Here, our pipeline is described in step-by-step fashion, starting with image acquisition, proceeding through image co-registration, manual segmentation, brain and vessel extraction, 3D visualization and manual planning of stereoEEG (SEEG) implantations. With dissemination of the software this pipeline can be reproduced in other centres, allowing other groups to benefit from 3DMMI. We also describe the use of an automated, multi-trajectory planner to generate stereoEEG implantation plans. Preliminary studies suggest this is a rapid, safe and efficacious adjunct for planning SEEG implantations. Finally, a simple solution for the export of plans and models to commercial neuronavigation systems for implementation of plans in the operating theater is described. This software is a valuable tool that can support clinical decision making throughout the epilepsy surgery pathway. PMID:27286266

  12. On a 3-D singularity element for computation of combined mode stress intensities

    Science.gov (United States)

    Atluri, S. N.; Kathiresan, K.

    1976-01-01

    A special three-dimensional singularity element is developed for the computation of combined modes 1, 2, and 3 stress intensity factors, which vary along an arbitrarily curved crack front in three dimensional linear elastic fracture problems. The finite element method is based on a displacement-hybrid finite element model, based on a modified variational principle of potential energy, with arbitrary element interior displacements, interelement boundary displacements, and element boundary tractions as variables. The special crack-front element used in this analysis contains the square root singularity in strains and stresses, where the stress-intensity factors K(1), K(2), and K(3) are quadratically variable along the crack front and are solved directly along with the unknown nodal displacements.

  13. A Scheme of 3-D Breakdown-whip Analysis Methodology for High Energy Piping

    International Nuclear Information System (INIS)

    excessive conservatism. It is thought that more accurate and effective system design is possible by making a combination of fluid transient analysis and 3-D structural analysis. The main purpose of this study is to introduce the procedure and method for analyzing 3-dimensional breakdown-whip of high energy piping. This study also shows some results of analyzing the fluid transient loads at the main steam line of APR1400

  14. Computation of thermal properties via 3D homogenization of multiphase materials using FFT-based accelerated scheme

    CERN Document Server

    Lemaitre, Sophie; Choi, Daniel; Karamian, Philippe

    2015-01-01

    In this paper we study the thermal effective behaviour for 3D multiphase composite material consisting of three isotropic phases which are the matrix, the inclusions and the coating media. For this purpose we use an accelerated FFT-based scheme initially proposed in Eyre and Milton (1999) to evaluate the thermal conductivity tensor. Matrix and spherical inclusions media are polymers with similar properties whereas the coating medium is metallic hence better conducting. Thus, the contrast between the coating and the others media is very large. For our study, we use RVEs (Representative volume elements) generated by RSA (Random Sequential Adsorption) method developed in our previous works, then, we compute effective thermal properties using an FFT-based homogenization technique validated by comparison with the direct finite elements method. We study the thermal behaviour of the 3D-multiphase composite material and we show what features should be taken into account to make the computational approach efficient.

  15. Pumping simulations using 3D FEM analysis on multi-pumping wells

    OpenAIRE

    Shuhei, KOTANI; Takahumi, KITAOKA; Makoto, NAKAMURA; Harushige, KUSUMI; 楠見, 晴重

    2011-01-01

    In this research, we chiefly conducted on-site measurement and analysis to examine how the pumping wells influence groundwater behavior. We established a 3D model for groundwater and make suggestions for the adequate management of the groundwater by a pumping simulation analysis. As a result, it can be seen from our research that the fluctuation of water level caused by group wells has been reproduced accurately by using our model.

  16. A comprehensive statistical framework for elastic shape analysis of 3D faces

    OpenAIRE

    Kurtek, Sebastian; Drira, Hassen

    2015-01-01

    International audience; We develop a comprehensive statistical framework for analyzing shapes of 3D faces. In particular, we adapt a recent elastic shape analysis framework to the case of hemispherical surfaces, and explore its use in a number of processing applications. This framework provides a parameterization-invariant, elastic Riemannian metric, which allows the development of mathematically rigorous tools for statistical analysis. Specifically, this paper describes methods for registrat...

  17. Parallel Isosurface Extraction for 3D Data Analysis Workflows in Distributed Environments

    OpenAIRE

    D'Agostino, Daniele; Clematis, Andrea; Gianuzzi, Vittoria

    2011-01-01

    Abstract In this paper we discuss the issues related to the development of efficient parallel implementations of the Marching Cubes algorithm, one of the most used methods for isosurface extraction, which is a fundamental operation for 3D data analysis and visualization. We present three possible parallelization strategies and we outline pros and cons of each of them, considering isosurface extraction as stand-alone operation or as part of a dynamic workflow. Our analysis shows tha...

  18. Quality Analysis on 3d Buidling Models Reconstructed from Uav Imagery

    Science.gov (United States)

    Jarzabek-Rychard, M.; Karpina, M.

    2016-06-01

    Recent developments in UAV technology and structure from motion techniques have effected that UAVs are becoming standard platforms for 3D data collection. Because of their flexibility and ability to reach inaccessible urban parts, drones appear as optimal solution for urban applications. Building reconstruction from the data collected with UAV has the important potential to reduce labour cost for fast update of already reconstructed 3D cities. However, especially for updating of existing scenes derived from different sensors (e.g. airborne laser scanning), a proper quality assessment is necessary. The objective of this paper is thus to evaluate the potential of UAV imagery as an information source for automatic 3D building modeling at LOD2. The investigation process is conducted threefold: (1) comparing generated SfM point cloud to ALS data; (2) computing internal consistency measures of the reconstruction process; (3) analysing the deviation of Check Points identified on building roofs and measured with a tacheometer. In order to gain deep insight in the modeling performance, various quality indicators are computed and analysed. The assessment performed according to the ground truth shows that the building models acquired with UAV-photogrammetry have the accuracy of less than 18 cm for the plannimetric position and about 15 cm for the height component.

  19. Implementation of Headtracking and 3D Stereo with Unity and VRPN for Computer Simulations

    Science.gov (United States)

    Noyes, Matthew A.

    2013-01-01

    This paper explores low-cost hardware and software methods to provide depth cues traditionally absent in monocular displays. The use of a VRPN server in conjunction with a Microsoft Kinect and/or Nintendo Wiimote to provide head tracking information to a Unity application, and NVIDIA 3D Vision for retinal disparity support, is discussed. Methods are suggested to implement this technology with NASA's EDGE simulation graphics package, along with potential caveats. Finally, future applications of this technology to astronaut crew training, particularly when combined with an omnidirectional treadmill for virtual locomotion and NASA's ARGOS system for reduced gravity simulation, are discussed.

  20. Computer Simulation of Flow in CSO “OK3D Evropská”

    OpenAIRE

    Pollert, J

    2000-01-01

    During the last 30 years, a number of devices has been developed for dynamic separation of settle able solids in wastewaters. Initially, these separators were used for control of Combined Sewer Overflow (CSO) pollution by retaining the bulk of solids in the underflow, directed to the sewage treatment plant (STP), and allowing combined sewage with reduced pollutant loads to overflow from the sewer systém. This paper is describing CSO “OK 3D Evropská” in Prague 6 on Evropská Street. Inlet...

  1. Isoparametric 3-D Finite Element Mesh Generation Using Interactive Computer Graphics

    Science.gov (United States)

    Kayrak, C.; Ozsoy, T.

    1985-01-01

    An isoparametric 3-D finite element mesh generator was developed with direct interface to an interactive geometric modeler program called POLYGON. POLYGON defines the model geometry in terms of boundaries and mesh regions for the mesh generator. The mesh generator controls the mesh flow through the 2-dimensional spans of regions by using the topological data and defines the connectivity between regions. The program is menu driven and the user has a control of element density and biasing through the spans and can also apply boundary conditions, loads interactively.

  2. 3D game engine design a practical approach to real-time computer graphics

    CERN Document Server

    Eberly, David H

    2006-01-01

    A major revision of the international bestseller on game programming!Graphics hardware has evolved enormously in the last decade. Hardware can now be directly controlled through techniques such as shader programming, which requires an entirely new thought process of a programmer. 3D Game Engine Design, Second Edition shows step-by-step how to make a shader-based graphics engine and how to tame the new technology. Much new material has been added, including more than twice the coverage of the essential techniques of scene graph management, as well as new methods for manag

  3. The role of computer-aided design in the learning of practical 3D-descriptive geometry: a case study

    OpenAIRE

    Edwards, Geoffrey Alan

    1988-01-01

    There are a number of problems surrounding the teaching of practical 3-D descriptive geometry to children in secondary education, notably the difficulty pupils have with visualising an object's form from orthographic views, and the interpretation of an object's geometric attributes into the descriptive geometry representation. The purpose of the current research is to evaluate the use of computer-aided design in this area of the curriculum and is based upon work under...

  4. Linking Microscopic Spatial Patterns of Tissue Destruction in Emphysema to Macroscopic Decline in Stiffness Using a 3D Computational Model

    OpenAIRE

    Parameswaran, Harikrishnan; Majumdar, Arnab; Suki, Béla

    2011-01-01

    Pulmonary emphysema is a connective tissue disease characterized by the progressive destruction of alveolar walls leading to airspace enlargement and decreased elastic recoil of the lung. However, the relationship between microscopic tissue structure and decline in stiffness of the lung is not well understood. In this study, we developed a 3D computational model of lung tissue in which a pre-strained cuboidal block of tissue was represented by a tessellation of space filling polyhedra, with e...

  5. Linking microscopic spatial patterns of tissue destruction in emphysema to macroscopic decline in stiffness using a 3D computational model.

    OpenAIRE

    Harikrishnan Parameswaran; Arnab Majumdar; Béla Suki

    2011-01-01

    Pulmonary emphysema is a connective tissue disease characterized by the progressive destruction of alveolar walls leading to airspace enlargement and decreased elastic recoil of the lung. However, the relationship between microscopic tissue structure and decline in stiffness of the lung is not well understood. In this study, we developed a 3D computational model of lung tissue in which a pre-strained cuboidal block of tissue was represented by a tessellation of space filling polyhedra, with e...

  6. Sentinel Lymph Node Detection by 3D Freehand Single-Photon Emission Computed Tomography in Early Stage Breast Cancer

    OpenAIRE

    Salih Sinan Gültekin; Ahmet Oğuz Hasdemir; Emine Öztürk

    2016-01-01

    We herein present our first experience obtained by 3D freehand single-photon emission computed tomography (SPECT) (F-SPECT) guidance for sentinel lymph node detection (SLND) in two patients with early stage breast cancer. F-SPECT guidance was carried out using one-day protocol in one case and by the two-day protocol in the other one. SLND was performed successfully in both patients. Histopathologic evaluation showed that the excised nodes were tumor negative. Thus, patients underw...

  7. Novel low-cost 2D/3D switchable autostereoscopic system for notebook computers and other portable devices

    Science.gov (United States)

    Eichenlaub, Jesse B.

    1995-03-01

    Mounting a lenticular lens in front of a flat panel display is a well known, inexpensive, and easy way to create an autostereoscopic system. Such a lens produces half resolution 3D images because half the pixels on the LCD are seen by the left eye and half by the right eye. This may be acceptable for graphics, but it makes full resolution text, as displayed by common software, nearly unreadable. Very fine alignment tolerances normally preclude the possibility of removing and replacing the lens in order to switch between 2D and 3D applications. Lenticular lens based displays are therefore limited to use as dedicated 3D devices. DTI has devised a technique which removes this limitation, allowing switching between full resolution 2D and half resolution 3D imaging modes. A second element, in the form of a concave lenticular lens array whose shape is exactly the negative of the first lens, is mounted on a hinge so that it can be swung down over the first lens array. When so positioned the two lenses cancel optically, allowing the user to see full resolution 2D for text or numerical applications. The two lenses, having complementary shapes, naturally tend to nestle together and snap into perfect alignment when pressed together--thus obviating any need for user operated alignment mechanisms. This system represents an ideal solution for laptop and notebook computer applications. It was devised to meet the stringent requirements of a laptop computer manufacturer including very compact size, very low cost, little impact on existing manufacturing or assembly procedures, and compatibility with existing full resolution 2D text- oriented software as well as 3D graphics. Similar requirements apply to high and electronic calculators, several models of which now use LCDs for the display of graphics.

  8. 3-D segmentation and quantitative analysis of inner and outer walls of thrombotic abdominal aortic aneurysms

    Science.gov (United States)

    Lee, Kyungmoo; Yin, Yin; Wahle, Andreas; Olszewski, Mark E.; Sonka, Milan

    2008-03-01

    An abdominal aortic aneurysm (AAA) is an area of a localized widening of the abdominal aorta, with a frequent presence of thrombus. A ruptured aneurysm can cause death due to severe internal bleeding. AAA thrombus segmentation and quantitative analysis are of paramount importance for diagnosis, risk assessment, and determination of treatment options. Until now, only a small number of methods for thrombus segmentation and analysis have been presented in the literature, either requiring substantial user interaction or exhibiting insufficient performance. We report a novel method offering minimal user interaction and high accuracy. Our thrombus segmentation method is composed of an initial automated luminal surface segmentation, followed by a cost function-based optimal segmentation of the inner and outer surfaces of the aortic wall. The approach utilizes the power and flexibility of the optimal triangle mesh-based 3-D graph search method, in which cost functions for thrombus inner and outer surfaces are based on gradient magnitudes. Sometimes local failures caused by image ambiguity occur, in which case several control points are used to guide the computer segmentation without the need to trace borders manually. Our method was tested in 9 MDCT image datasets (951 image slices). With the exception of a case in which the thrombus was highly eccentric, visually acceptable aortic lumen and thrombus segmentation results were achieved. No user interaction was used in 3 out of 8 datasets, and 7.80 +/- 2.71 mouse clicks per case / 0.083 +/- 0.035 mouse clicks per image slice were required in the remaining 5 datasets.

  9. The impacts of open-mouth breathing on upper airway space in obstructive sleep apnea: 3-D MDCT analysis.

    Science.gov (United States)

    Kim, Eun Joong; Choi, Ji Ho; Kim, Kang Woo; Kim, Tae Hoon; Lee, Sang Hag; Lee, Heung Man; Shin, Chol; Lee, Ki Yeol; Lee, Seung Hoon

    2011-04-01

    Open-mouth breathing during sleep is a risk factor for obstructive sleep apnea (OSA) and is associated with increased disease severity and upper airway collapsibility. The aim of this study was to investigate the effect of open-mouth breathing on the upper airway space in patients with OSA using three-dimensional multi-detector computed tomography (3-D MDCT). The study design included a case-control study with planned data collection. The study was performed at a tertiary medical center. 3-D MDCT analysis was conducted on 52 patients with OSA under two experimental conditions: mouth closed and mouth open. Under these conditions, we measured the minimal cross-sectional area of the retropalatal and retroglossal regions (mXSA-RP, mXSA-RG), as well as the upper airway length (UAL), defined as the vertical dimension from hard palate to hyoid. We also computed the volume of the upper airway space by 3-D reconstruction of both conditions. When the mouth was open, mXSA-RP and mXSA-RG significantly decreased and the UAL significantly increased, irrespective of the severity of OSA. However, between the closed- and open-mouth states, there was no significant change in upper airway volume at any severity of OSA. Results suggest that the more elongated and narrow upper airway during open-mouth breathing may aggravate the collapsibility of the upper airway and, thus, negatively affect OSA severity.

  10. 3D structural analysis of proteins using electrostatic surfaces based on image segmentation

    Science.gov (United States)

    Vlachakis, Dimitrios; Champeris Tsaniras, Spyridon; Tsiliki, Georgia; Megalooikonomou, Vasileios; Kossida, Sophia

    2016-01-01

    Herein, we present a novel strategy to analyse and characterize proteins using protein molecular electro-static surfaces. Our approach starts by calculating a series of distinct molecular surfaces for each protein that are subsequently flattened out, thus reducing 3D information noise. RGB images are appropriately scaled by means of standard image processing techniques whilst retaining the weight information of each protein’s molecular electrostatic surface. Then homogeneous areas in the protein surface are estimated based on unsupervised clustering of the 3D images, while performing similarity searches. This is a computationally fast approach, which efficiently highlights interesting structural areas among a group of proteins. Multiple protein electrostatic surfaces can be combined together and in conjunction with their processed images, they can provide the starting material for protein structural similarity and molecular docking experiments.

  11. Computer Simulation of Flow in CSO “OK3D Evropská”

    Directory of Open Access Journals (Sweden)

    J. Pollert

    2000-01-01

    Full Text Available During the last 30 years, a number of devices has been developed for dynamic separation of settle able solids in wastewaters. Initially, these separators were used for control of Combined Sewer Overflow (CSO pollution by retaining the bulk of solids in the underflow, directed to the sewage treatment plant (STP, and allowing combined sewage with reduced pollutant loads to overflow from the sewer systém. This paper is describing CSO “OK 3D Evropská” in Prague 6 on Evropská Street. Inlet to CSO is 3 m diameter tube collecting water from location of Oepy, Vokovice, Liboc and Ruzyně. The outflow throttle pipe is 1.1 m in diameter and continues to central wastewater treatment plant and overflow is ending in Šárecký creek. Šárecký creek flows through the Šárka valley which is environmentally protected area. CSO “OK 3D Evropská" has high overflow crest and probability of the function is 0.44 per year.

  12. Fabrication of computationally designed scaffolds by low temperature 3D printing

    International Nuclear Information System (INIS)

    The development of artificial bone substitutes that mimic the properties of bone and simultaneously promote the desired tissue regeneration is a current issue in bone tissue engineering research. An approach to create scaffolds with such characteristics is based on the combination of novel design and additive manufacturing processes. The objective of this work is to characterize the microstructural and the mechanical properties of scaffolds developed by coupling both topology optimization and a low temperature 3D printing process. The scaffold design was obtained using a topology optimization approach to maximize the permeability with constraints on the mechanical properties. This procedure was studied to be suitable for the fabrication of a cage prototype for tibial tuberosity advancement application, which is one of the most recent and promising techniques to treat cruciate ligament rupture in dogs. The microstructural and mechanical properties of the scaffolds manufactured by reacting α/β-tricalcium phosphate with diluted phosphoric acid were then assessed experimentally and the scaffolds strength reliability was determined. The results demonstrate that the low temperature 3D printing process is a reliable option to create synthetic scaffolds with tailored properties, and when coupled with topology optimization design it can be a powerful tool for the fabrication of patient-specific bone implants. (paper)

  13. Analysis results from the Los Alamos 2D/3D program

    International Nuclear Information System (INIS)

    Los Alamos National Laboratory is a participant in the 2D/3D program. Activities conducted at Los Alamos National Laboratory in support of 2D/3D program goals include analysis support of facility design, construction, and operation; provision of boundary and initial conditions for test-facility operations based on analysis of pressurized water reactors; performance of pretest and posttest predictions and analyses; and use of experimental results to validate and assess the single- and multi-dimensional, nonequilibrium features in the Transient Reactor Analysis Code (TRAC). During fiscal year 1987, Los Alamos conducted analytical assessment activities using data from the Slab Core Test Facility, The Cylindrical Core Test Facility, and the Upper Plenum Test Facility. Finally, Los Alamos continued work to provide TRAC improvements. In this paper, Los Alamos activities during fiscal year 1987 will be summarized; several significant accomplishments will be described in more detail to illustrate the work activities at Los Alamos

  14. Analysis results from the Los Alamos 2D/3D program

    International Nuclear Information System (INIS)

    Los Alamos National Laboratory is a participant in the 2D/3D program. Activities conducted at Los Alamos National Laboratory in support of 2D/3D program goals include analysis support of facility design, construction, and operation; provision of boundary and initial conditions for test-facility operations based on analysis of pressurized water reactors; performance of pretest and post-test predictions and analyses; and use of experimental results to validate and assess the single- and multi-dimensional, nonequilibrium features in the Transient Reactor Analysis Code (TRAC). During fiscal year 1987, Los Alamos conducted analytical assessment activities using data from the Slab Core Test Facility, the Cylindrical Core Test Facility, and the Upper Plenum Test Facility. Finally, Los Alamos continued work to provide TRAC improvements. In this paper, Los Alamos activities during fiscal year 1987 are summarized; several significant accomplishments are described in more detail to illustrate the work activities at Los Alamos

  15. 3D DIGITIZATION OF AN HERITAGE MASTERPIECE - A CRITICAL ANALYSIS ON QUALITY ASSESSMENT

    Directory of Open Access Journals (Sweden)

    F. Menna

    2016-06-01

    Full Text Available Despite being perceived as interchangeable when properly applied, close-range photogrammetry and range imaging have both their pros and limitations that can be overcome using suitable procedures. Even if the two techniques have been frequently cross-compared, critical analysis discussing all sub-phases of a complex digitization project are quite rare. Comparisons taking into account the digitization of a cultural masterpiece, such as the Etruscan Sarcophagus of the Spouses (Figure 1 discussed in this paper, are even less common. The final 3D model of the Sarcophagus shows impressive spatial and texture resolution, in the order of tenths of millimetre for both digitization techniques, making it a large 3D digital model even though the physical size of the artwork is quite limited. The paper presents the survey of the Sarcophagus, a late 6th century BC Etruscan anthropoid Sarcophagus. Photogrammetry and laser scanning were used for its 3D digitization in two different times only few days apart from each other. The very short time available for the digitization was a crucial constraint for the surveying operations (due to constraints imposed us by the museum curators. Despite very high-resolution and detailed 3D models have been produced, a metric comparison between the two models shows intrinsic limitations of each technique that should be overcome through suitable onsite metric verification procedures as well as a proper processing workflow.

  16. Multi-dimensional Seismic Response Analysis of Base-Isolated Frame Structure with 3D Isolator

    Institute of Scientific and Technical Information of China (English)

    Xiong Shishu; Huang Liting; Chen Jinfeng; Su Jingsu

    2005-01-01

    The three-dimensional lead-rubber dish-spring bearing (3DB) is proposed in this paper. The 3DB is composed of lead rubber bearing (LRB) and dish-spring bearing (DSB) with damper in series. The 3DB put forward in this paper is effective in the resolution of difficulties in strong vertical capacity and vertical damping of three-dimensional isolation bearings. It effectively suppresses rocking motions as well. The analytical model and motion equations of multi-dimensional seismic responses of 3D base-isolated frame structures are established. Taking a five-storey frame structure as an example, an extensive simulation analysis is carried out. The results show that the 3D base-isolated structure with the proposed 3DB is effective in 3D isolation; it can reduce seismic responses by 50 % compared to a non-isolated structure. Therefore, the 3D isolation problem in building can be solved easily and effectively with the 3DB proposed in this paper.

  17. A finite element analysis of a 3D auxetic textile structure for composite reinforcement

    International Nuclear Information System (INIS)

    This paper reports the finite element analysis of an innovative 3D auxetic textile structure consisting of three yarn systems (weft, warp and stitch yarns). Different from conventional 3D textile structures, the proposed structure exhibits an auxetic behaviour under compression and can be used as a reinforcement to manufacture auxetic composites. The geometry of the structure is first described. Then a 3D finite element model is established using ANSYS software and validated by the experimental results. The deformation process of the structure at different compression strains is demonstrated, and the validated finite element model is finally used to simulate the auxetic behaviour of the structure with different structural parameters and yarn properties. The results show that the auxetic behaviour of the proposed structure increases with increasing compression strain, and all the structural parameters and yarn properties have significant effects on the auxetic behaviour of the structure. It is expected that the study could provide a better understanding of 3D auxetic textile structures and could promote their application in auxetic composites. (paper)

  18. 3-D computational method of wave loads on turret moored FPSO tankers

    Institute of Scientific and Technical Information of China (English)

    REN Hui-long; ZHANG Hai-bin; DAI Yu-zhi; SONG Jing-zheng

    2003-01-01

    A three-dimensional method of calculating wave loads of turret moored FPSO (Floating Production Storage and Offloading) tankers is presented. The linearized restoring forces acting on the ship hull by the mooring system are calculated according to the catenary theory, which are expressed as the function of linear stiffness coefficients and the displacements of the upper ends of mooring chains. The hydrodynamic coefficients of the ship are calculated by the three-dimensional potential flow theory of the linear hydrodynamic problem for ships with a low forward speed. The equations of ship motions are established with the effect of the restoring forces from the mooring system included as linear stiffness coefficients. The equations of motions are solved in frequency domain, and the responses of wave-induced motions and loads on the ship can be obtained. A computer program based on this method has been developed,and some calculation examples are illustrated. Analysis results show that the method can give satisfying prediction of wave loads.

  19. Advanced Multi-modal User Interfaces in 3D Computer Graphics and Virtual Reality

    OpenAIRE

    Chen, Yenan

    2012-01-01

    Computers are developed continuously to satisfy the human demands, and typical tools used everywhere for ranging from daily life usage to all kinds of research. Virtual Reality (VR), a virtual environment simulated to present physical presence in the real word and imaginary worlds, has been widely applied to simulate the virtual environment. People’s feeling is limited to visual perception when only computers are applied for simulations, since computers are limited to display visualization of...

  20. Statistical 3D shape analysis of gender differences in lateral ventricles

    Science.gov (United States)

    He, Qing; Karpman, Dmitriy; Duan, Ye

    2010-03-01

    This paper aims at analyzing gender differences in the 3D shapes of lateral ventricles, which will provide reference for the analysis of brain abnormalities related to neurological disorders. Previous studies mostly focused on volume analysis, and the main challenge in shape analysis is the required step of establishing shape correspondence among individual shapes. We developed a simple and efficient method based on anatomical landmarks. 14 females and 10 males with matching ages participated in this study. 3D ventricle models were segmented from MR images by a semiautomatic method. Six anatomically meaningful landmarks were identified by detecting the maximum curvature point in a small neighborhood of a manually clicked point on the 3D model. Thin-plate spline was used to transform a randomly selected template shape to each of the rest shape instances, and the point correspondence was established according to Euclidean distance and surface normal. All shapes were spatially aligned by Generalized Procrustes Analysis. Hotelling T2 twosample metric was used to compare the ventricle shapes between males and females, and False Discovery Rate estimation was used to correct for the multiple comparison. The results revealed significant differences in the anterior horn of the right ventricle.

  1. Defining new dental phenotypes using 3-D image analysis to enhance discrimination and insights into biological processes

    Science.gov (United States)

    Smith, Richard; Zaitoun, Halla; Coxon, Tom; Karmo, Mayada; Kaur, Gurpreet; Townsend, Grant; Harris, Edward F.; Brook, Alan

    2009-01-01

    Aims In studying aetiological interactions of genetic, epigenetic and environmental factors in normal and abnormal developments of the dentition, methods of measurement have often been limited to maximum mesio-distal and bucco-lingual crown diameters, obtained with hand-held calipers. While this approach has led to many important findings, there are potentially many other informative measurements that can be made to describe dental crown morphology. Advances in digital imaging and computer technology now offer the opportunity to define and measure new dental phenotypes in 3-D that have the potential to provide better anatomical discrimination and clearer insights into the underlying biological processes in dental development. Over recent years, image analysis in 2-D has proved to be a valuable addition to hand-measurement methods but a reliable and rapid 3-D method would increase greatly the morphological information obtainable from natural teeth and dental models. Additional measurements such as crown heights, surface contours, actual surface perimeters and areas, and tooth volumes would maximise our ability to discriminate between samples and to explore more deeply genetic and environmental contributions to observed variation. The research objectives were to investigate the limitations of existing methodologies and to develop and validate new methods for obtaining true 3-D measurements, including curvatures and volumes, in order to enhance discrimination to allow increased differentiation in studies of dental morphology and development. The validity of a new methodology for the 3-D measurement of teeth is compared against an established 2-D system. The intra- and inter-observer reliability of some additional measurements, made possible with a 3-D approach, are also tested. Methods and results From each of 20 study models, the permanent upper right lateral and upper left central incisors were separated and imaged independently by two operators using 2-D image

  2. Casting directly from a computer model by using advanced simulation software FLOW-3D Cast ®

    Directory of Open Access Journals (Sweden)

    M. Sirviö

    2009-01-01

    Full Text Available ConiferRob - A patternless casting technique, originally conceived at VTT Technical Research Centre of Finland and furtherdeveloped at its spin-off company, Simtech Systems, offers up to 40% savings in product development costs, and up to two months shorterdevelopment times compared to conventional techniques. Savings of this order can be very valuable on today's highly competitivemarkets. Casting simulation is commonly used for designing of casting systems. However, most of the software are today old fashioned and predicting just shrinkage porosity. Flow Science, VTT and Simtech have developed new software called FLOW-3D Cast ® , whichcan simulate surface defects, air entrainment, filters, core gas problems and even a cavitation.

  3. Factors Affecting the Precision of Electrostatic Computation of 3D MEMS Structures

    CERN Document Server

    Majumdar, N

    2006-01-01

    Micro-Electro-Mechanical Systems (MEMS) normally have fixed or moving structures (plates or array of thin beams) with cross-sections of the order of microns and lengths of the order of tens or hundreds of microns. Electrostatic forces play a very major role in maneuvering these devices, and hence, a thorough understanding of the electrostatic properties of these structures is of critical importance. Recently, a nearly exact boundary element method (neBEM) solver has been developed and used to solve difficult problems related to electrostatics of various devices. Because of the exact foundation expressions, this solver has been found to be very accurate while solving critical problems which normally necessitate special formulations involving elegant, but difficult mathematics. In this work, we investigate the effects of various possible approximations on the 3D electrostatic solutions obtained for MEMS structures. In particular, we investigate the effects of discretization, omission of surfaces with small amou...

  4. Optical properties of 3d-ions in crystals spectroscopy and crystal field analysis

    CERN Document Server

    Brik, Mikhail

    2013-01-01

    "Optical Properties of 3d-Ions in Crystals: Spectroscopy and Crystal Field Analysis" discusses spectral, vibronic and magnetic properties of 3d-ions in a wide range of crystals, used as active media for solid state lasers and potential candidates for this role. Crystal field calculations (including first-principles calculations of energy levels and absorption spectra) and their comparison with experimental spectra, the Jahn-Teller effect, analysis of vibronic spectra, materials science applications are systematically presented. The book is intended for researchers and graduate students in crystal spectroscopy, materials science and optical applications. Dr. N.M. Avram is an Emeritus Professor at the Physics Department, West University of Timisoara, Romania; Dr. M.G. Brik is a Professor at the Institute of Physics, University of Tartu, Estonia.

  5. 3D AVO Analysis for Identifying Thin Continental Sandstone Interbeds and Deep Volcanic Rocks

    Institute of Scientific and Technical Information of China (English)

    Fulei; WangJianmin; CuiFenglin; XuJianjun; ZhangXiangjun; KongXiangbo

    2005-01-01

    AVO characteristics were ambiguous in thin-layer interbed sandstones and mudstones of terrestrial facies of Daqing area. Described in this paper is the 3D AVO analysis and real examples in the Songzhan region in the north of the Songliao basin. The AVO responses of the Fuyu sandstone reservoir, obtained through special AVO processing and interpretation as well as the AVO forwardmod eling under the constraints of logging data, were evident in the Sheng-81 well. It was concluded that the Fuyu sandstone reservoir presented an AVO anomaly of “amplitudes increasing with offsets”.At the same time, the deep volcanic reservoirs were ascertained and the channels of volcanic eruption were delineated at the intersections of faults in Sanzhao area, through a 3D AVO analysis, which coincided with the theory of geodynamics and tectonophysics.

  6. A novel structured dictionary for fast processing of 3D medical images, with application to computed tomography restoration and denoising

    Science.gov (United States)

    Karimi, Davood; Ward, Rabab K.

    2016-03-01

    Sparse representation of signals in learned overcomplete dictionaries has proven to be a powerful tool with applications in denoising, restoration, compression, reconstruction, and more. Recent research has shown that learned overcomplete dictionaries can lead to better results than analytical dictionaries such as wavelets in almost all image processing applications. However, a major disadvantage of these dictionaries is that their learning and usage is very computationally intensive. In particular, finding the sparse representation of a signal in these dictionaries requires solving an optimization problem that leads to very long computational times, especially in 3D image processing. Moreover, the sparse representation found by greedy algorithms is usually sub-optimal. In this paper, we propose a novel two-level dictionary structure that improves the performance and the speed of standard greedy sparse coding methods. The first (i.e., the top) level in our dictionary is a fixed orthonormal basis, whereas the second level includes the atoms that are learned from the training data. We explain how such a dictionary can be learned from the training data and how the sparse representation of a new signal in this dictionary can be computed. As an application, we use the proposed dictionary structure for removing the noise and artifacts in 3D computed tomography (CT) images. Our experiments with real CT images show that the proposed method achieves results that are comparable with standard dictionary-based methods while substantially reducing the computational time.

  7. The relationship between 3D bone architectural parameters and elastic moduli of three orthogonal directions predicted from finite elements analysis

    Energy Technology Data Exchange (ETDEWEB)

    Park, Kwan Soo; Lee, Sam Sun; Huh, Kyung Hoe; Yi, Wan Jin; Heo, Min Suk; Choi, Soon Chul [Department of Oral and Maxillofacial Radiology, School of Dentistry, Seoul National University, Seoul (Korea, Republic of)

    2008-06-15

    To investigate the relationship between 3D bone architectural parameters and direction-related elastic moduli of cancellous bone of mandibular condyle. Two micro-pigs (Micro-pigR, PWG Genetics Korea) were used. Each pig was about 12 months old and weighing around 44 kg. 31 cylindrical bone specimen were obtained from cancellous bone of condyles for 3D analysis and measured by micro-computed tomography. Six parameters were trabecular thickness (Tb.Th), bone specific surface (BS/BV), percent bone volume (BV/TV), structure model index (SMI), degree of anisotropy (DA) and 3-dimensional fractal dimension (3DFD). Elastic moduli of three orthogonal directions (superiorinferior (SI), medial-lateral (ML), andterior-posterior (AP) direction) were calculated through finite element analysis. Elastic modulus of superior-inferior direction was higher than those of other directions. Elastic moduli of 3 orthogonal directions showed different correlation with 3D architectural parameters. Elastic moduli of SI and ML directions showed significant strong to moderate correlation with BV/TV, SMI and 3DFD. Elastic modulus of cancellous bone of pig mandibular condyle was highest in the SI direction and it was supposed that the change into plate-like structure of trabeculae was mainly affected by increase of trabeculae of SI and ML directions.

  8. Analysis of a 3D imaging device by reconstruction from cone beam X ray radiographs

    International Nuclear Information System (INIS)

    The aim of our study is to analyse the principle of a 3D imaging device which attempts to restore the local density on a cuberill from a set of digital radiographs taken around the object. We have to use a ponctual radiation source to localize the acquisition lines. Therefore the attenuation measurements are modelled by the cone beam X ray transform. In the analysis of the inverse problem, we work out two inversion diagrams which compute the original function, the image of the object, by a sequence of transforms. The theoretical and algorithmical difficulty comes from the fact that, even in the simple case of a circular acquisition trajectory, the cone-shaped geometry prohibits splitting the problem into a superposition of reconstructions in two dimensions. We describe a novel theoretical framework based on the Radon transform. In this new representation space, it becomes possible by a rebinning operation to redistribute the integral values associated to planes from the coordinates system linked to source positions to the spherical coordinates system of the domain. To ensure this shift of space, we have established two formulas, the first approximate but leading to faster processing, related to the Radon transform, the second exact, related to the first derivative of the Radon transform. The inversion of these transforms completes the reconstruction. We state a theorem where we present the hypothesis under which the exact diagram does restore the original function. These are not verified for a circular trajectory, owing to a shadow zone in the Radon domain associated to the planes which intersect the object but not the trajectory. We propose either to restore the missing information or to use an oscillating trajectory

  9. Efficient computation of steady, 3D water-wave patterns, application to hovercraft-type flows

    NARCIS (Netherlands)

    Lewis, M.R.; Koren, B.

    2002-01-01

    Numerical methods for the computation of stationary free surfaces is the subject of much current research in computational engineering. The present report is directed towards free surfaces in maritime engineering. Of interest here are the long steady waves generated by hovercraft and ships, the grav

  10. 3D CFD computations of trasitional flows using DES and a correlation based transition model

    DEFF Research Database (Denmark)

    Sørensen, Niels N.; Bechmann, Andreas; Zahle, Frederik

    2011-01-01

    The present article describes the application of the correlation based transition model of Menter et al. in combination with the Detached Eddy Simulation (DES) methodology to two cases with large degree of flow separation typically considered difficult to compute. Firstly, the flow is computed over...

  11. Strategy and software for the statistical spatial analysis of 3D intracellular distributions.

    Science.gov (United States)

    Biot, Eric; Crowell, Elizabeth; Burguet, Jasmine; Höfte, Herman; Vernhettes, Samantha; Andrey, Philippe

    2016-07-01

    The localization of proteins in specific domains or compartments in the 3D cellular space is essential for many fundamental processes in eukaryotic cells. Deciphering spatial organization principles within cells is a challenging task, in particular because of the large morphological variations between individual cells. We present here an approach for normalizing variations in cell morphology and for statistically analyzing spatial distributions of intracellular compartments from collections of 3D images. The method relies on the processing and analysis of 3D geometrical models that are generated from image stacks and that are used to build representations at progressively increasing levels of integration, ultimately revealing statistical significant traits of spatial distributions. To make this methodology widely available to end-users, we implemented our algorithmic pipeline into a user-friendly, multi-platform, and freely available software. To validate our approach, we generated 3D statistical maps of endomembrane compartments at subcellular resolution within an average epidermal root cell from collections of image stacks. This revealed unsuspected polar distribution patterns of organelles that were not detectable in individual images. By reversing the classical 'measure-then-average' paradigm, one major benefit of the proposed strategy is the production and display of statistical 3D representations of spatial organizations, thus fully preserving the spatial dimension of image data and at the same time allowing their integration over individual observations. The approach and software are generic and should be of general interest for experimental and modeling studies of spatial organizations at multiple scales (subcellular, cellular, tissular) in biological systems.

  12. ECOLOGICAL AND TECHNOLOGICAL ANALYSIS OF MATERIALS FOR 3D-PRINTING

    OpenAIRE

    Є.О. Бовсуновський; Зінченко, Р. О.

    2016-01-01

    The article analyzes the main materials used for 3D-printing. Particular attention is paid to the study of ecological and technological analysis of the effects of the most widely used material: Polylactic Acid and Acrylonitrile Butadiene Styrene, as well as their professional series and Nylon, Polyethylene Terephthalate, TPE on the environment. The article deals with the characteristic features of the physical properties of materials (material) for their intended purpose, according sharing al...

  13. Examining the effect of pore size distribution and shape on flow through unsaturated peat using 3-D computed tomography

    Directory of Open Access Journals (Sweden)

    F. Rezanezhad

    2009-05-01

    Full Text Available The hydraulic conductivity of unsaturated peat soils is controlled by the peat structure which affects the air-filled porosity, pore size distribution and shape. This study investigates how the size and shape of pores affects the flow of water through peat soils. In this study we used X-ray Computed Tomography (CT, at 45 µm resolution under 5 specific soil-water pressure head levels to provide 3-D, high-resolution images that were used to detect the inner pore structure of peat samples under a changing water regime. Pore structure and configuration were found to be irregular, which affected the rate of water transmission through peat soils. The 3-D analysis suggested that pore distribution is dominated by a single large pore-space. At low pressure head, this single large air-filled pore imparted a more effective flowpath compared to smaller pores. Smaller pores were disconnected and the flowpath was more tortuous than in the single large air-filled pore, and their contribution to flow was negligible when the single large pore was active. We quantify the pore structure of peat soil that affects the hydraulic conductivity in the unsaturated condition, and demonstrate the validity of our estimation of peat unsaturated hydraulic conductivity by making a comparison with a standard permeameter-based method. Estimates of unsaturated hydraulic conductivities were made for the purpose of testing the sensitivity of pore shape and geometry parameters on the hydraulic properties of peats and how to evaluate the structure of the peat and its affects on parameterization. We also studied the ability to quantify these factors for different soil moisture contents in order to define how the factors controlling the shape coefficient vary with changes in soil water pressure head. The relation between measured and estimated unsaturated hydraulic conductivity at various heads shows that rapid initial drainage, that changes the air-filled pore properties, creates a

  14. 3-D parallel program for numerical calculation of gas dynamics problems with heat conductivity on distributed memory computational systems (CS)

    Energy Technology Data Exchange (ETDEWEB)

    Sofronov, I.D.; Voronin, B.L.; Butnev, O.I. [VNIIEF (Russian Federation)] [and others

    1997-12-31

    The aim of the work performed is to develop a 3D parallel program for numerical calculation of gas dynamics problem with heat conductivity on distributed memory computational systems (CS), satisfying the condition of numerical result independence from the number of processors involved. Two basically different approaches to the structure of massive parallel computations have been developed. The first approach uses the 3D data matrix decomposition reconstructed at temporal cycle and is a development of parallelization algorithms for multiprocessor CS with shareable memory. The second approach is based on using a 3D data matrix decomposition not reconstructed during a temporal cycle. The program was developed on 8-processor CS MP-3 made in VNIIEF and was adapted to a massive parallel CS Meiko-2 in LLNL by joint efforts of VNIIEF and LLNL staffs. A large number of numerical experiments has been carried out with different number of processors up to 256 and the efficiency of parallelization has been evaluated in dependence on processor number and their parameters.

  15. The three-dimensional elemental distribution based on the surface topography by confocal 3D-XRF analysis

    Science.gov (United States)

    Yi, Longtao; Qin, Min; Wang, Kai; Lin, Xue; Peng, Shiqi; Sun, Tianxi; Liu, Zhiguo

    2016-09-01

    Confocal three-dimensional micro-X-ray fluorescence (3D-XRF) is a good surface analysis technology widely used to analyse elements and elemental distributions. However, it has rarely been applied to analyse surface topography and 3D elemental mapping in surface morphology. In this study, a surface adaptive algorithm using the progressive approximation method was designed to obtain surface topography. A series of 3D elemental mapping analyses in surface morphology were performed in laboratories to analyse painted pottery fragments from the Majiayao Culture (3300-2900 BC). To the best of our knowledge, for the first time, sample surface topography and 3D elemental mapping were simultaneously obtained. Besides, component and depth analyses were also performed using synchrotron radiation confocal 3D-XRF and tabletop confocal 3D-XRF, respectively. The depth profiles showed that the sample has a layered structure. The 3D elemental mapping showed that the red pigment, black pigment, and pottery coat contain a large amount of Fe, Mn, and Ca, respectively. From the 3D elemental mapping analyses at different depths, a 3D rendering was obtained, clearly showing the 3D distributions of the red pigment, black pigment, and pottery coat. Compared with conventional 3D scanning, this method is time-efficient for analysing 3D elemental distributions and hence especially suitable for samples with non-flat surfaces.

  16. Application of 3D Spatio-Temporal Data Modeling, Management, and Analysis in DB4GEO

    Science.gov (United States)

    Kuper, P. V.; Breunig, M.; Al-Doori, M.; Thomsen, A.

    2016-10-01

    Many of todaýs world wide challenges such as climate change, water supply and transport systems in cities or movements of crowds need spatio-temporal data to be examined in detail. Thus the number of examinations in 3D space dealing with geospatial objects moving in space and time or even changing their shapes in time will rapidly increase in the future. Prominent spatio-temporal applications are subsurface reservoir modeling, water supply after seawater desalination and the development of transport systems in mega cities. All of these applications generate large spatio-temporal data sets. However, the modeling, management and analysis of 3D geo-objects with changing shape and attributes in time still is a challenge for geospatial database architectures. In this article we describe the application of concepts for the modeling, management and analysis of 2.5D and 3D spatial plus 1D temporal objects implemented in DB4GeO, our service-oriented geospatial database architecture. An example application with spatio-temporal data of a landfill, near the city of Osnabrück in Germany demonstrates the usage of the concepts. Finally, an outlook on our future research focusing on new applications with big data analysis in three spatial plus one temporal dimension in the United Arab Emirates, especially the Dubai area, is given.

  17. Integrating Data Clustering and Visualization for the Analysis of 3D Gene Expression Data

    Energy Technology Data Exchange (ETDEWEB)

    Data Analysis and Visualization (IDAV) and the Department of Computer Science, University of California, Davis, One Shields Avenue, Davis CA 95616, USA,; nternational Research Training Group ``Visualization of Large and Unstructured Data Sets,' ' University of Kaiserslautern, Germany; Computational Research Division, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley, CA 94720, USA; Genomics Division, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley CA 94720, USA; Life Sciences Division, Lawrence Berkeley National Laboratory, One Cyclotron Road, Berkeley CA 94720, USA,; Computer Science Division,University of California, Berkeley, CA, USA,; Computer Science Department, University of California, Irvine, CA, USA,; All authors are with the Berkeley Drosophila Transcription Network Project, Lawrence Berkeley National Laboratory,; Rubel, Oliver; Weber, Gunther H.; Huang, Min-Yu; Bethel, E. Wes; Biggin, Mark D.; Fowlkes, Charless C.; Hendriks, Cris L. Luengo; Keranen, Soile V. E.; Eisen, Michael B.; Knowles, David W.; Malik, Jitendra; Hagen, Hans; Hamann, Bernd

    2008-05-12

    The recent development of methods for extracting precise measurements of spatial gene expression patterns from three-dimensional (3D) image data opens the way for new analyses of the complex gene regulatory networks controlling animal development. We present an integrated visualization and analysis framework that supports user-guided data clustering to aid exploration of these new complex datasets. The interplay of data visualization and clustering-based data classification leads to improved visualization and enables a more detailed analysis than previously possible. We discuss (i) integration of data clustering and visualization into one framework; (ii) application of data clustering to 3D gene expression data; (iii) evaluation of the number of clusters k in the context of 3D gene expression clustering; and (iv) improvement of overall analysis quality via dedicated post-processing of clustering results based on visualization. We discuss the use of this framework to objectively define spatial pattern boundaries and temporal profiles of genes and to analyze how mRNA patterns are controlled by their regulatory transcription factors.

  18. Validation Analysis for the Calculation of a Turbulent Free Jet in Water Using CFDS-FLOW 3-D and FLUENT

    International Nuclear Information System (INIS)

    The application of computational fluid dynamics methods to the analysis of mixing in the high level waste tanks at the Savannah River Site requires a demonstration that the computer codes can properly represent the behavior of fluids in the tanks. The motive force for mixing the tanks is a set of jet pumps taking suction from the tank fluid and discharging turbulent jets near the bottom of the tank. The work described here focuses on the free turbulent jet in water as the simplest case of jet behavior for which data could be found in the open literature. Calculations performed with both CFDS-FLOW3D and FLUENT were compared with data as well as classical jet theory. Results showed both codes agreed reasonably well with each other and with the data, but that results were sensitive to the computational mesh and, to a lesser degree, the selection of turbulence models

  19. 3-D Viscous Flow Analysis of a Mixed Flow Pump Impeller

    OpenAIRE

    Steven M. Miner

    2001-01-01

    This paper presents the results of a study using a coarse grid to analyze the flow in the impeller of a mixed flow pump. A commercial computational fluid dynamics code (FLOTRAN) is used to solve the 3-D Reynolds Averaged Navier Stokes equations in a rotating cylindrical coordinate system. The standard k-ε turbulence model is used. The mesh for this study uses 26,000 nodes and the model is run on a SPARCstation 20. This is in contrast to typical analyses using in excess of 100,000 nodes that a...

  20. 3-D Viscous Flow Analysis of an Axial Flow Pump Impeller

    OpenAIRE

    Steven M. Miner

    1997-01-01

    A commercial CFD code is used to compute the flow field within the first stage impeller of a two stage axial flow pump. The code solves the 3-D Reynolds Averaged Navier Stokes equations in a rotating cylindrical coordinate system using a standard k−ε turbulence model. Stage design parameters are, rotational speed 870 rpm, flow coefficient φ=0.12, head coefficient ψ=0.06, and specific speed 2.86 (8070 US). Results from the study include relative and absolute velocities, flow angles, and static...

  1. 3D hierarchical computational model of wood as a cellular material with fibril reinforced, heterogeneous multiple layers

    DEFF Research Database (Denmark)

    Qing, Hai; Mishnaevsky, Leon

    2009-01-01

    is presented as a 3D hexagon-shape-tube with multilayered walls. The layers in the softwood cell are considered as considered as composite reinforced by microfibrils (celluloses). The elastic properties of the layers are determined with Halpin–Tsai equations, and introduced into mesoscale finite element......A 3D hierarchical computational model of deformation and stiffness of wood, which takes into account the structures of wood at several scale levels (cellularity, multilayered nature of cell walls, composite-like structures of the wall layers) is developed. At the mesoscale, the softwood cell...... cellular model. With the use of the developed hierarchical model, the influence of the microstructure, including microfibril angles (MFAs, which characterizes the orientation of the cellulose fibrils with respect to the cell axis), the thickness of the cell wall, the shape of the cell cross...

  2. Progress in off-plane computer-generated waveguide holography for near-to-eye 3D display

    Science.gov (United States)

    Jolly, Sundeep; Savidis, Nickolaos; Datta, Bianca; Bove, V. Michael; Smalley, Daniel

    2016-03-01

    Waveguide holography refers to the use of holographic techniques for the control of guided-wave light in integrated optical devices (e.g., off-plane grating couplers and in-plane distributed Bragg gratings for guided-wave optical filtering). Off-plane computer-generated waveguide holography (CGWH) has also been employed in the generation of simple field distributions for image display. We have previously depicted the design and fabrication of a binary-phase CGWH operating in the Raman-Nath regime for the purposes of near-to-eye 3-D display and as a precursor to a dynamic, transparent flat-panel guided-wave holographic video display. In this paper, we describe design algorithms and fabrication techniques for multilevel phase CGWHs for near-to-eye 3-D display.

  3. A 3D edge detection technique for surface extraction in computed tomography for dimensional metrology applications

    DEFF Research Database (Denmark)

    Yagüe-Fabra, J.A.; Ontiveros, S.; Jiménez, R.;

    2013-01-01

    Many factors influence the measurement uncertainty when using computed tomography for dimensional metrology applications. One of the most critical steps is the surface extraction phase. An incorrect determination of the surface may significantly increase the measurement uncertainty. This paper...

  4. Geometric Neural Computing for 2D Contour and 3D Surface Reconstruction

    Science.gov (United States)

    Rivera-Rovelo, Jorge; Bayro-Corrochano, Eduardo; Dillmann, Ruediger

    In this work we present an algorithm to approximate the surface of 2D or 3D objects combining concepts from geometric algebra and artificial neural networks. Our approach is based on the self-organized neural network called Growing Neural Gas (GNG), incorporating versors of the geometric algebra in its neural units; such versors are the transformations that will be determined during the training stage and then applied to a point to approximate the surface of the object. We also incorporate the information given by the generalized gradient vector flow to select automatically the input patterns, and also in the learning stage in order to improve the performance of the net. Several examples using medical images are presented, as well as images of automatic visual inspection. We compared the results obtained using snakes against the GSOM incorporating the gradient information and using versors. Such results confirm that our approach is very promising. As a second application, a kind of morphing or registration procedure is shown; namely the algorithm can be used when transforming one model at time t 1 into another at time t 2. We include also examples applying the same procedure, now extended to models based on spheres.

  5. SHADOW EFFECT ON PHOTOVOLTAIC POTENTIALITY ANALYSIS USING 3D CITY MODELS

    Directory of Open Access Journals (Sweden)

    N. Alam

    2012-07-01

    Full Text Available Due to global warming, green-house effect and various other drawbacks of existing energy sources, renewable energy like Photovoltaic system is being popular for energy production. The result of photovoltaic potentiality analysis depends on data quality and parameters. Shadow rapidly decreases performance of the Photovoltaic system and it always changes due to the movement of the sun. Solar radiation incident on earth's atmosphere is relatively constant but the radiation at earth's surface varies due to absorption, scattering, reflection, change in spectral content, diffuse component, water vapor, clouds and pollution etc. In this research, it is being investigated that how efficiently real-time shadow can be detected for both direct and diffuse radiation considering reflection and other factors in contrast with the existing shadow detection methods using latest technologies and what is the minimum quality of data required for this purpose. Of course, geometric details of the building geometry and surroundings directly affect the calculation of shadows. In principle, 3D city models or point clouds, which contain roof structure, vegetation, thematically differentiated surface and texture, are suitable to simulate exact real-time shadow. This research would develop an automated procedure to measure exact shadow effect from the 3D city models and a long-term simulation model to determine the produced energy from the photovoltaic system. In this paper, a developed method for detecting shadow for direct radiation has been discussed with its result using a 3D city model to perform a solar energy potentiality analysis.

  6. A generalized approach to the modeling and analysis of 3D surface morphology in organisms.

    Directory of Open Access Journals (Sweden)

    Janice L Pappas

    Full Text Available The surface geometry of an organism represents the boundary of its three-dimensional (3D form and can be used as a proxy for the phenotype. A mathematical approach is presented that describes surface morphology using parametric 3D equations with variables expressed as x, y, z in terms of parameters u, v. Partial differentiation of variables with respect to parameters yields elements of the Jacobian representing tangent lines and planes of every point on the surface. Jacobian elements provide a compact size-free summary of the entire surface, and can be used as variables in principal components analysis to produce a morphospace. Mollusk and echinoid models are generated to demonstrate that whole organisms can be represented in a common morphospace, regardless of differences in size, geometry, and taxonomic affinity. Models can be used to simulate theoretical forms, novel morphologies, and patterns of phenotypic variation, and can also be empirically-based by designing them with reference to actual forms using reverse engineering principles. Although this study uses the Jacobian to summarize models, they can also be analyzed with 3D methods such as eigensurface, spherical harmonics, wavelet analysis, and geometric morphometrics. This general approach should prove useful for exploring broad questions regarding morphological evolution and variation.

  7. 3D wind-induced response analysis of a cable-membrane structure

    Institute of Scientific and Technical Information of China (English)

    Jun-jie LUO; Da-jian HAN

    2009-01-01

    Wind loading is a dominant factor for design of a cable-membrane structure. Three orthogonal turbulent components, including the longitudinal, lateral and vertical wind velocities, should be taken into account for the wind loads. In this study, a stochastic 3D coupling wind field model is derived by the spectral representation theory, The coherence functions of the three orthognnal turbulent components are considered in this model. Then the model is applied to generate the three correlated wind turbulent components. After that, formulae are proposed to transform the velocities into wind loads, and to introduce the modified wind pressure force. Finally, a wind-induced time-history response analysis is conducted for a 3D cable-membrane structure. Analytical results indicate that responses induced by the proposed wind load model are 10%--25% larger than those by the con-ventionai uncorrelated model, and that the responses are not quite influenced by the modified wind pressure force. Therefore, we concluded that, in the time-history response analysis, the coherences of the three orthogonal turbulent components are necessary for a 3D cable-membrane structure, but the modified wind pressure force can be ignored.

  8. Nonlinear analysis of chaotic flow in a 3D closed-loop pulsating heat pipe

    CERN Document Server

    Pouryoussefi, S M

    2016-01-01

    Numerical simulation has been conducted for the chaotic flow in a 3D closed-loop pulsating heat pipe (PHP). Heat flux and constant temperature boundary conditions were applied for evaporator and condenser sections, respectively. Water and ethanol were used as working fluids. Volume of Fluid (VOF) method has been employed for two-phase flow simulation. Spectral analysis of temperature time series was carried out using Power Spectrum Density (PSD) method. Existence of dominant peak in PSD diagram indicated periodic or quasi-periodic behavior in temperature oscillations at particular frequencies. Correlation dimension values for ethanol as working fluid was found to be higher than that for water under the same operating conditions. Similar range of Lyapunov exponent values for the PHP with water and ethanol as working fluids indicated strong dependency of Lyapunov exponent to the structure and dimensions of the PHP. An O-ring structure pattern was obtained for reconstructed 3D attractor at periodic or quasi-peri...

  9. 3D Reconstruction of Coronal Loops by the Principal Component Analysis

    Directory of Open Access Journals (Sweden)

    Erwin Verwichte

    2013-10-01

    Full Text Available Knowing the three dimensional structure of plasma filaments in the uppermost part of the solar atmosphere, known as coronal loops, and especially their length, is an important parameter in the wave-based diagnostics of this part of the Sun. The combination of observations of the Sun from different points of observations in space, thanks to the most recent missions, including the Solar Dynamics Observatory (SDO and the Solar TErrestrial RElations Observatory (STEREO, allows us to infer information about the geometrical shape of coronal loops in 3D space. Here, we propose a new method to reconstruct the loop shape starting from stereoscopically determined 3D points, which sample the loop length, by principal component analysis. This method is shown to retrieve in an easy way the main parameters that define the loop, e.g., the minor and major axes, the loop plane, the azimuthal and inclination angles, for the special case of a coplanar loop.

  10. ELASTIC BEHAVIOR ANALYSIS OF 3D ANGLE-INTERLOCK WOVEN CERAMIC COMPOSITES

    Institute of Scientific and Technical Information of China (English)

    Chang Yanjun; Jiao Guiqiong; Wang Bo; Liu Wei

    2006-01-01

    A micromechanical model for elastic behavior analysis of angle-interlock woven ceramic composites is proposed in this paper. This model takes into account the actual fabric structure by considering the fiber undulation and continuity in space, the cavities between adjacent yarns and the actual cross-section geometry of the yarn. Based on the laminate theory, the elastic properties of 3D angle-interlock woven ceramic composites are predicted. Different numbers of interlaced wefts have almost the same elastic moduli. The thickness of ceramic matrix has little effect on elastic moduli. When the undulation ratio increases longitudinal modulus decreases and the other Young's moduli increase. Good agreement between theoretical predictions and experimental results demonstrates the feasibility of the proposed model in analyzing the elastic properties of3D angle-interlock woven ceramic composites. The results of this paper verify the fact that the method of analyzing polyester matrix composites is suitable for woven ceramic composites.

  11. Experimental analysis of mechanical response of stabilized occipitocervical junction by 3D mark tracking technique

    Directory of Open Access Journals (Sweden)

    Brémand F.

    2010-06-01

    Full Text Available This study is about a biomechanical comparison of some stabilization solutions for the occipitocervical junction. Four kinds of occipito-cervical fixations are analysed in this work: lateral plates fixed by two kinds of screws, lateral plates fixed by hooks and median plate. To study mechanical rigidity of each one, tests have been performed on human skulls by applying loadings and by studying mechanical response of fixations and bone. For this experimental analysis, a specific setup has been developed to impose a load corresponding to the flexion-extension physiological movements. 3D mark tracking technique is employed to measure 3D displacement fields on the bone and on the fixations. Observations of displacement evolution on the bone according to the fixation show different rigidities given by each solution.

  12. Vision-based building energy diagnostics and retrofit analysis using 3D thermography and building information modeling

    Science.gov (United States)

    Ham, Youngjib

    localization issues of 2D thermal image-based inspection, a new computer vision-based method is presented for automated 3D spatio-thermal modeling of building environments from images and localizing the thermal images into the 3D reconstructed scenes, which helps better characterize the as-is condition of existing buildings in 3D. By using these models, auditors can conduct virtual walk-through in buildings and explore the as-is condition of building geometry and the associated thermal conditions in 3D. Second, to address the challenges in qualitative and subjective interpretation of visual data, a new model-based method is presented to convert the 3D thermal profiles of building environments into their associated energy performance metrics. More specifically, the Energy Performance Augmented Reality (EPAR) models are formed which integrate the actual 3D spatio-thermal models ('as-is') with energy performance benchmarks ('as-designed') in 3D. In the EPAR models, the presence and location of potential energy problems in building environments are inferred based on performance deviations. The as-is thermal resistances of the building assemblies are also calculated at the level of mesh vertex in 3D. Then, based on the historical weather data reflecting energy load for space conditioning, the amount of heat transfer that can be saved by improving the as-is thermal resistances of the defective areas to the recommended level is calculated, and the equivalent energy cost for this saving is estimated. The outcome provides building practitioners with unique information that can facilitate energy efficient retrofit decision-makings. This is a major departure from offhand calculations that are based on historical cost data of industry best practices. Finally, to improve the reliability of BIM-based energy performance modeling and analysis for existing buildings, a new model-based automated method is presented to map actual thermal resistance measurements at the level of 3D vertexes to the

  13. Stereoscopic motion analysis in densely packed clusters: 3D analysis of the shimmering behaviour in Giant honey bees

    OpenAIRE

    Hoetzl Thomas; Ruether Matthias; Weihmann Frank; Maurer Michael; Kastberger Gerald; Kranner Ilse; Bischof Horst

    2011-01-01

    Abstract Background The detailed interpretation of mass phenomena such as human escape panic or swarm behaviour in birds, fish and insects requires detailed analysis of the 3D movements of individual participants. Here, we describe the adaptation of a 3D stereoscopic imaging method to measure the positional coordinates of individual agents in densely packed clusters. The method was applied to study behavioural aspects of shimmering in Giant honeybees, a collective defence behaviour that deter...

  14. 3-D Computer Animation vs. Live-Action Video: Differences in Viewers' Response to Instructional Vignettes

    Science.gov (United States)

    Smith, Dennie; McLaughlin, Tim; Brown, Irving

    2012-01-01

    This study explored computer animation vignettes as a replacement for live-action video scenarios of classroom behavior situations previously used as an instructional resource in teacher education courses in classroom management strategies. The focus of the research was to determine if the embedded behavioral information perceived in a live-action…

  15. Soft Computing Based Point Correspondence Matching for Automatic 3D Reconstruction

    Directory of Open Access Journals (Sweden)

    Annamária R. Várkonyi-Kóczy

    2005-06-01

    Full Text Available In computer vision image point correspondence matching plays an importantrole. With the help of the point correspondence matching algorithms for example some ofmethods concerning the field of stereo vision can be automatized. This paper presents amethod for quickly and reliably selecting and matching of the most interesting image points(feature points.

  16. Noise reduction in computed tomography scans using 3-d anisotropic hybrid diffusion with continuous switch.

    NARCIS (Netherlands)

    Mendrik, A.M.; Vonken, E.J.; Rutten, A.; Viergever, M.A.; Ginneken, B. van

    2009-01-01

    Noise filtering techniques that maintain image contrast while decreasing image noise have the potential to optimize the quality of computed tomography (CT) images acquired at reduced radiation dose. In this paper, a hybrid diffusion filter with continuous switch (HDCS) is introduced, which exploits

  17. A computational model for estimating tumor margins in complementary tactile and 3D ultrasound images

    Science.gov (United States)

    Shamsil, Arefin; Escoto, Abelardo; Naish, Michael D.; Patel, Rajni V.

    2016-03-01

    Conventional surgical methods are effective for treating lung tumors; however, they impose high trauma and pain to patients. Minimally invasive surgery is a safer alternative as smaller incisions are required to reach the lung; however, it is challenging due to inadequate intraoperative tumor localization. To address this issue, a mechatronic palpation device was developed that incorporates tactile and ultrasound sensors capable of acquiring surface and cross-sectional images of palpated tissue. Initial work focused on tactile image segmentation and fusion of position-tracked tactile images, resulting in a reconstruction of the palpated surface to compute the spatial locations of underlying tumors. This paper presents a computational model capable of analyzing orthogonally-paired tactile and ultrasound images to compute the surface circumference and depth margins of a tumor. The framework also integrates an error compensation technique and an algebraic model to align all of the image pairs and to estimate the tumor depths within the tracked thickness of a palpated tissue. For validation, an ex vivo experimental study was conducted involving the complete palpation of 11 porcine liver tissues injected with iodine-agar tumors of varying sizes and shapes. The resulting tactile and ultrasound images were then processed using the proposed model to compute the tumor margins and compare them to fluoroscopy based physical measurements. The results show a good negative correlation (r = -0.783, p = 0.004) between the tumor surface margins and a good positive correlation (r = 0.743, p = 0.009) between the tumor depth margins.

  18. A continuation method for computing non-linear 3-D free surface flows

    Energy Technology Data Exchange (ETDEWEB)

    Petersson, N.A.

    1993-01-01

    The subject of this paper is a pseudo-arclength continuation method for computing non-linear three-dimensional steady potential flow around a submerged body moving in a infinitely deep liquid at constant speed and distance below the free surface.

  19. Computational 3D structures of drug-targeting proteins in the 2009-H1N1 influenza A virus

    Science.gov (United States)

    Du, Qi-Shi; Wang, Shu-Qing; Huang, Ri-Bo; Chou, Kuo-Chen

    2010-01-01

    The neuraminidase (NA) and M2 proton channel of influenza virus are the drug-targeting proteins, based on which several drugs were developed. However these once powerful drugs encountered drug-resistant problem to the H5N1 and H1N1 flu. To address this problem, the computational 3D structures of NA and M2 proteins of 2009-H1N1 influenza virus were built using the molecular modeling technique and computational chemistry method. Based on the models the structure features of NA and M2 proteins were analyzed, the docking structures of drug-protein complexes were computed, and the residue mutations were annotated. The results may help to solve the drug-resistant problem and stimulate designing more effective drugs against 2009-H1N1 influenza pandemic.

  20. Human factors flight trial analysis for 2D/3D SVS

    Science.gov (United States)

    Schiefele, Jens; Howland, Duncan; Maris, John; Wipplinger, Patrick

    2004-08-01

    The paper describes flight trials performed in Reno, NV. Flight trial were conducted with a Cheyenne 1 from Marinvent. Twelve pilots flew the Cheyenne in seventy-two approaches to the Reno airfield. All pilots flew completely andomized settings. Three different settings (standard displays, 2D moving map, and 2D/3D moving map) were evaluated. They included seamless evaluation for STAR, approach, and taxi operations. The flight trial goal was to evaluate the objective performance of pilots compared among the different settings. As dependent variables, positional and time accuracy were measured. Analysis was conducted by an ANOVA test. In parallel, all pilots answered subjective Cooper-Harper, situation awareness rating technique (SART), situational awareness probe (SAP), and questionnaires.This article describes the human factor analysis from flight trials performed in Reno, NV. Flight trials were conducted with a Cheyenne 1 from Marinvent. Thirteen pilots flew the Cheyenne in seventy-two approaches to the Reno airfield. All pilots flew completely randomized settings. Three different display configurations: Elec. Flight Information System (EFIS), EFIS and 2D moving map, and 3D SVS Primary Flight Display (PFD) and 2D moving map were evaluated. They included normal/abnormal procedure evaluation for: Steep turns and reversals, Unusual attitude recovery, Radar vector guidance towards terrain, Non-precision approaches, En-route alternate for non-IFR rated pilots encountering IMC, and Taxiing on complex taxi-routes. The flight trial goal was to evaluate the objective performance of pilots for the different display configurations. As dependent variables, positional and time data were measured. Analysis was performed by an ANOVA test. In parallel, all pilots answered subjective NASA Task Load Index, Cooper-Harper, Situation Awareness Rating Technique (SART), and questionnaires. The result shows that pilots flying 2D/3D SVS perform no worse than pilots with conventional

  1. On the computation of long period seismograms in a 3-D earth using normal mode based approximations

    Science.gov (United States)

    Romanowicz, Barbara A.; Panning, Mark P.; Gung, Yuancheng; Capdeville, Yann

    2008-11-01

    Tomographic inversions for large-scale structure of the earth's mantle involve a forward modelling step of wave propagation through 3-D heterogeneity. Until now, most investigators have worked in the framework of the simplest theoretical assumptions, namely the infinite frequency `ray theory' in the case of body wave traveltime inversions, or the `path-average' approximation (PAVA) to normal mode perturbation theory, in the case of surface waves and long-period waveforms. As interest is shifting to mapping shorter wavelength structures, the need for a more accurate theoretical account of the interaction of seismic waves with mantle heterogeneity, coupled with improvements in path coverage, has been realized. Here we discuss different levels of approximations used in the context of normal mode perturbation theory, when modelling time domain seismic waveforms. We compare the performance of asymptotic approximations, which collapse the effects of 3-D structure onto the great circle vertical plane: the 1-D PAVA and a 2-D approximation called non-linear asymptotic coupling theory (NACT), which both are zeroth order asymptotic approximations. We then discuss how off-vertical plane effects can be introduced using higher order asymptotics. These computationally efficient approximations are compared to the linear Born formalism (BORN), which computes scattering integrals over the entire surface of the sphere. We point out some limitations of this linear formalism in the case of spatially extended anomalies, and show how that can be remedied through the introduction of a non-linear term (NBORN). All these approximations are referenced to a precise 3-D numerical computation afforded by the spectral element method. We discuss simple geometries, and explore a range of sizes of anomalies compared to the wavelength of the seismic waves considered, thus illustrating the range of validity and limitations of the various approximations considered.

  2. Action Sport Cameras as an Instrument to Perform a 3D Underwater Motion Analysis.

    Science.gov (United States)

    Bernardina, Gustavo R D; Cerveri, Pietro; Barros, Ricardo M L; Marins, João C B; Silvatti, Amanda P

    2016-01-01

    Action sport cameras (ASC) are currently adopted mainly for entertainment purposes but their uninterrupted technical improvements, in correspondence of cost decreases, are going to disclose them for three-dimensional (3D) motion analysis in sport gesture study and athletic performance evaluation quantitatively. Extending this technology to sport analysis however still requires a methodologic step-forward to making ASC a metric system, encompassing ad-hoc camera setup, image processing, feature tracking, calibration and 3D reconstruction. Despite traditional laboratory analysis, such requirements become an issue when coping with both indoor and outdoor motion acquisitions of athletes. In swimming analysis for example, the camera setup and the calibration protocol are particularly demanding since land and underwater cameras are mandatory. In particular, the underwater camera calibration can be an issue affecting the reconstruction accuracy. In this paper, the aim is to evaluate the feasibility of ASC for 3D underwater analysis by focusing on camera setup and data acquisition protocols. Two GoPro Hero3+ Black (frequency: 60Hz; image resolutions: 1280×720/1920×1080 pixels) were located underwater into a swimming pool, surveying a working volume of about 6m3. A two-step custom calibration procedure, consisting in the acquisition of one static triad and one moving wand, carrying nine and one spherical passive markers, respectively, was implemented. After assessing camera parameters, a rigid bar, carrying two markers at known distance, was acquired in several positions within the working volume. The average error upon the reconstructed inter-marker distances was less than 2.5mm (1280×720) and 1.5mm (1920×1080). The results of this study demonstrate that the calibration of underwater ASC is feasible enabling quantitative kinematic measurements with accuracy comparable to traditional motion capture systems.

  3. Action Sport Cameras as an Instrument to Perform a 3D Underwater Motion Analysis.

    Science.gov (United States)

    Bernardina, Gustavo R D; Cerveri, Pietro; Barros, Ricardo M L; Marins, João C B; Silvatti, Amanda P

    2016-01-01

    Action sport cameras (ASC) are currently adopted mainly for entertainment purposes but their uninterrupted technical improvements, in correspondence of cost decreases, are going to disclose them for three-dimensional (3D) motion analysis in sport gesture study and athletic performance evaluation quantitatively. Extending this technology to sport analysis however still requires a methodologic step-forward to making ASC a metric system, encompassing ad-hoc camera setup, image processing, feature tracking, calibration and 3D reconstruction. Despite traditional laboratory analysis, such requirements become an issue when coping with both indoor and outdoor motion acquisitions of athletes. In swimming analysis for example, the camera setup and the calibration protocol are particularly demanding since land and underwater cameras are mandatory. In particular, the underwater camera calibration can be an issue affecting the reconstruction accuracy. In this paper, the aim is to evaluate the feasibility of ASC for 3D underwater analysis by focusing on camera setup and data acquisition protocols. Two GoPro Hero3+ Black (frequency: 60Hz; image resolutions: 1280×720/1920×1080 pixels) were located underwater into a swimming pool, surveying a working volume of about 6m3. A two-step custom calibration procedure, consisting in the acquisition of one static triad and one moving wand, carrying nine and one spherical passive markers, respectively, was implemented. After assessing camera parameters, a rigid bar, carrying two markers at known distance, was acquired in several positions within the working volume. The average error upon the reconstructed inter-marker distances was less than 2.5mm (1280×720) and 1.5mm (1920×1080). The results of this study demonstrate that the calibration of underwater ASC is feasible enabling quantitative kinematic measurements with accuracy comparable to traditional motion capture systems. PMID:27513846

  4. Performance Analysis of 3D Massive MIMO Cellular Systems with Collaborative Base Station

    Directory of Open Access Journals (Sweden)

    Xingwang Li

    2014-01-01

    Full Text Available Massive MIMO have drawn considerable attention as they enable significant capacity and coverage improvement in wireless cellular network. However, pilot contamination is a great challenge in massive MIMO systems. Under this circumstance, cooperation and three-dimensional (3D MIMO are emerging technologies to eliminate the pilot contamination and to enhance the performance relative to the traditional interference-limited implementations. Motivated by this, we investigate the achievable sum rate performance of MIMO systems in the uplink employing cooperative base station (BS and 3D MIMO systems. In our model, we consider the effects of both large-scale and small-scale fading, as well as the spatial correlation and indoor-to-outdoor high-rise propagation environment. In particular, we investigate the cooperative communication model based on 3D MIMO and propose a closed-form lower bound on the sum rate. Utilizing this bound, we pursue a “large-system” analysis and provide the asymptotic expression when the number of antennas at the BS grows large, and when the numbers of antennas at transceiver grow large with a fixed ratio. We demonstrate that the lower bound is very tight and becomes exact in the massive MIMO system limits. Finally, under the sum rate maximization condition, we derive the optimal number of UTs to be served.

  5. 3D distribution of interstellar medium in the Galaxy: Preparation for analysis of Gaia observations

    Energy Technology Data Exchange (ETDEWEB)

    Puspitarini, Lucky, E-mail: rosine.lallement@obspm.fr [GEPI Observatoire de Paris, CNRS, Paris Diderot University, 5 Place Jules Janssen, 92190, Meudon (France); Bosscha Observatory and Department of Astronomy, FMIPA, Institut Teknologi Bandung, Jl. Ganesha 10, Bandung 40132 (Indonesia); Lallement, Rosine, E-mail: rosine.lallement@obspm.fr [GEPI Observatoire de Paris, CNRS, Paris Diderot University, 5 Place Jules Janssen, 92190, Meudon (France)

    2015-09-30

    Accurate and detailed three-dimensional (3D) maps of Galactic interstellar medium (ISM) are still lacking. One way to obtain such 3D descriptions is to record a large set of individual absorption or reddening measurements toward target stars located at various known distances and directions. The inversion of these measurements using a tomographic method can produce spatial distribution of the ISM. Until recently absorption data were very limited and distances to the target stars are still uncertain, but the situation will greatly improve thanks to current and future massive stellar surveys from ground, and to Gaia mission. To prepare absorption data for inversion from a huge number of stellar spectra, automated tools are needed. We have developed various spectral analysis tools adapted to different type of spectra, early- or late- type star. We also have used diffuse interstellar bands (DIBs) to trace IS structures and kinematics. Although we do not know yet their carriers, they can be a promising tool to trace distant interstellar clouds or Galactic arms. We present some examples of the interstellar fitting and show the potentiality of DIBs in tracing the ISM. We will also briefly show and comment the latest 3D map of the local ISM which reveal nearby cloud complexes and cavities.

  6. Detailed analysis of an optimized FPP-based 3D imaging system

    Science.gov (United States)

    Tran, Dat; Thai, Anh; Duong, Kiet; Nguyen, Thanh; Nehmetallah, Georges

    2016-05-01

    In this paper, we present detail analysis and a step-by-step implementation of an optimized fringe projection profilometry (FPP) based 3D shape measurement system. First, we propose a multi-frequency and multi-phase shifting sinusoidal fringe pattern reconstruction approach to increase accuracy and sensitivity of the system. Second, phase error compensation caused by the nonlinear transfer function of the projector and camera is performed through polynomial approximation. Third, phase unwrapping is performed using spatial and temporal techniques and the tradeoff between processing speed and high accuracy is discussed in details. Fourth, generalized camera and system calibration are developed for phase to real world coordinate transformation. The calibration coefficients are estimated accurately using a reference plane and several gauge blocks with precisely known heights and by employing a nonlinear least square fitting method. Fifth, a texture will be attached to the height profile by registering a 2D real photo to the 3D height map. The last step is to perform 3D image fusion and registration using an iterative closest point (ICP) algorithm for a full field of view reconstruction. The system is experimentally constructed using compact, portable, and low cost off-the-shelf components. A MATLAB® based GUI is developed to control and synchronize the whole system.

  7. 3D Product authenticity model for online retail: An invariance analysis

    Directory of Open Access Journals (Sweden)

    Algharabat, R.

    2010-01-01

    Full Text Available This study investigates the effects of different levels of invariance analysis on three dimensional (3D product authenticity model (3DPAM constructs in the e- retailing context. A hypothetical retailer website presents a variety of laptops using 3D product visualisations. The proposed conceptual model achieves acceptable fit and the hypothesised paths are all valid. We empirically investigate the invariance across the subgroups to validate the results of our 3DPAM. We concluded that the 3D product authenticity model construct was invariant for our sample across different gender, level of education and study backgrounds. These findings suggested that all our subgroups conceptualised the 3DPAM similarly. Also the results show some non-invariance results for the structural and latent mean models. The gender group posits a non-invariance latent mean model. Study backgrounds group reveals a non-invariance result for the structural model. These findings allowed us to understand the 3DPAMs validity in the e-retail context. Managerial implications are explained.

  8. Sentinel Lymph Node Detection by 3D Freehand Single-Photon Emission Computed Tomography in Early Stage Breast Cancer

    Directory of Open Access Journals (Sweden)

    Salih Sinan Gültekin

    2016-06-01

    Full Text Available We herein present our first experience obtained by 3D freehand single-photon emission computed tomography (SPECT (F-SPECT guidance for sentinel lymph node detection (SLND in two patients with early stage breast cancer. F-SPECT guidance was carried out using one-day protocol in one case and by the two-day protocol in the other one. SLND was performed successfully in both patients. Histopathologic evaluation showed that the excised nodes were tumor negative. Thus, patients underwent breast-conserving surgery alone.

  9. Computer-aided determination of occlusal contact points for dental 3-D CAD.

    Science.gov (United States)

    Maruyama, Tomoaki; Nakamura, Yasuo; Hayashi, Toyohiko; Kato, Kazumasa

    2006-05-01

    Present dental CAD systems enable us to design functional occlusal tooth surfaces which harmonize with the patient's stomatognathic function. In order to avoid occlusal interferences during tooth excursions, currently available systems usually use the patient's functional occlusal impressions for the design of occlusal contact points. Previous interfere-free design, however, has been done on a trial-and-error basis by using visual inspection. To improve this time-consuming procedure, this paper proposes a computer-aided system for assisting in the determination of the occlusal contact points by visualizing the appropriate regions of the opposing surface. The system can designate such regions from data of the opposing occlusal surfaces and their relative movements can be simulated by using a virtual articulator. Experiments for designing the crown of a lower first molar demonstrated that all contact points selected within the designated regions completely satisfied the required contact or separation during tooth excursions, confirming the effectiveness of our computer-aided procedure.

  10. Accurate computation of Galerkin double surface integrals in the 3-D boundary element method

    CERN Document Server

    Adelman, Ross; Duraiswami, Ramani

    2015-01-01

    Many boundary element integral equation kernels are based on the Green's functions of the Laplace and Helmholtz equations in three dimensions. These include, for example, the Laplace, Helmholtz, elasticity, Stokes, and Maxwell's equations. Integral equation formulations lead to more compact, but dense linear systems. These dense systems are often solved iteratively via Krylov subspace methods, which may be accelerated via the fast multipole method. There are advantages to Galerkin formulations for such integral equations, as they treat problems associated with kernel singularity, and lead to symmetric and better conditioned matrices. However, the Galerkin method requires each entry in the system matrix to be created via the computation of a double surface integral over one or more pairs of triangles. There are a number of semi-analytical methods to treat these integrals, which all have some issues, and are discussed in this paper. We present novel methods to compute all the integrals that arise in Galerkin fo...

  11. LEWICE3D/GlennHT Particle Analysis of the Honeywell Al502 Low Pressure Compressor

    Science.gov (United States)

    Bidwell, Colin S.; Rigby, David L.

    2015-01-01

    A flow and ice particle trajectory analysis was performed for the booster of the Honeywell AL502 engine. The analysis focused on two closely related conditions one of which produced a rollback and another which did not rollback during testing in the Propulsion Systems Lab at NASA Glenn Research Center. The flow analysis was generated using the NASA Glenn GlennHT flow solver and the particle analysis was generated using the NASA Glenn LEWICE3D v3.56 ice accretion software. The flow and particle analysis used a 3D steady flow, mixing plane approach to model the transport of flow and particles through the engine. The inflow conditions for the rollback case were: airspeed, 145 ms; static pressure, 33,373 Pa; static temperature, 253.3 K. The inflow conditions for the non-roll-back case were: airspeed, 153 ms; static pressure, 34,252 Pa; static temperature, 260.1 K. Both cases were subjected to an ice particle cloud with a median volume diameter of 24 microns, an ice water content of 2.0 gm3 and a relative humidity of 100 percent. The most significant difference between the rollback and non-rollback conditions was the inflow static temperature which was 6.8 K higher for the non-rollback case.

  12. EVALUATION OF THE LIVER METASTASIS BY 3D-COMPUTED TOMOGRAPHY

    OpenAIRE

    Iuliana Eva; R.C. Tiutiuca

    2005-01-01

    Abdominal spiral computed tomography is the method of choice for the diagnosis of hepatic metastasis, evaluating lesions even under 10 mm. Treatment depends of the hepatic and extrahepatic spread of disease. Therapeutical options include surgical ablation (resection, enucleation, crioablation, radiofrequency, liver transplant) or non-surgical (embolization or chemoembolization, therapeutic aproach through the hepatic artery). Precise diagnostic and evaluation of the extension of the disease...

  13. Uncertainty analysis in 3D global models: Aerosol representation in MOZART-4

    Science.gov (United States)

    Gasore, J.; Prinn, R. G.

    2012-12-01

    The Probabilistic Collocation Method (PCM) has been proven to be an efficient general method of uncertainty analysis in atmospheric models (Tatang et al 1997, Cohen&Prinn 2011). However, its application has been mainly limited to urban- and regional-scale models and chemical source-sink models, because of the drastic increase in computational cost when the dimension of uncertain parameters increases. Moreover, the high-dimensional output of global models has to be reduced to allow a computationally reasonable number of polynomials to be generated. This dimensional reduction has been mainly achieved by grouping the model grids into a few regions based on prior knowledge and expectations; urban versus rural for instance. As the model output is used to estimate the coefficients of the polynomial chaos expansion (PCE), the arbitrariness in the regional aggregation can generate problems in estimating uncertainties. To address these issues in a complex model, we apply the probabilistic collocation method of uncertainty analysis to the aerosol representation in MOZART-4, which is a 3D global chemical transport model (Emmons et al., 2010). Thereafter, we deterministically delineate the model output surface into regions of homogeneous response using the method of Principal Component Analysis. This allows the quantification of the uncertainty associated with the dimensional reduction. Because only a bulk mass is calculated online in Mozart-4, a lognormal number distribution is assumed with a priori fixed scale and location parameters, to calculate the surface area for heterogeneous reactions involving tropospheric oxidants. We have applied the PCM to the six parameters of the lognormal number distributions of Black Carbon, Organic Carbon and Sulfate. We have carried out a Monte-Carlo sampling from the probability density functions of the six uncertain parameters, using the reduced PCE model. The global mean concentration of major tropospheric oxidants did not show a

  14. Computation of stationary 3D halo currents in fusion devices with accuracy control

    Science.gov (United States)

    Bettini, Paolo; Specogna, Ruben

    2014-09-01

    This paper addresses the calculation of the resistive distribution of halo currents in three-dimensional structures of large magnetic confinement fusion machines. A Neumann electrokinetic problem is solved on a geometry so complicated that complementarity is used to monitor the discretization error. An irrotational electric field is obtained by a geometric formulation based on the electric scalar potential, whereas three geometric formulations are compared to obtain a solenoidal current density: a formulation based on the electric vector potential and two geometric formulations inspired from mixed and mixed-hybrid Finite Elements. The electric vector potential formulation is usually considered impractical since an enormous computing power is wasted by the topological pre-processing it requires. To solve this challenging problem, we present novel algorithms based on lazy cohomology generators that enable to save orders of magnitude computational time with respect to all other state-of-the-art solutions proposed in literature. Believing that our results are useful in other fields of scientific computing, the proposed algorithm is presented as a detailed pseudocode in such a way that it can be easily implemented.

  15. Linearity of patient positioning detection. A phantom study of skin markers, cone beam computed tomography, and 3D ultrasound

    Energy Technology Data Exchange (ETDEWEB)

    Ballhausen, Hendrik; Hieber, Sheila; Li, Minglun; Belka, Claus; Reiner, Michael [University Hospital of LMU, Department of Radiation Oncology, Munich (Germany); Parodi, Katia [Ludwig-Maximilian-University, Department of Experimental Physics - Medical Physics, Munich (Germany)

    2015-05-01

    Three-dimensional ultrasound (3D-US) is a modality complementary to kilovoltage cone beam computed tomography (kV-CBCT) and skin markers for patient positioning detection. This study compares the linearity of evaluations based on measurements using a modern 3D-US system (Elekta Clarity {sup registered}; Elekta, Stockholm, Sweden), a kV-CBCT system (Elekta iView {sup registered}), and skin markers. An investigator deliberately displaced a multimodal phantom by up to ± 30 mm along different axes. The following data points were acquired: 27 along the lateral axis, 29 along the longitudinal axis, 27 along the vertical axis, and 27 along the space diagonal. At each of these 110 positions, the displacements according to skin' markers were recorded and scans were performed using both 3D-US and kV-CBCT. Shifts were detected by matching bony anatomy or soft tissue density to a reference planning CT in the case of kV-CBCT and for 3D-US, by matching ultrasound volume data to a reference planning volume. A consensus value was calculated from the average of the four modalities. With respect to this consensus value, the linearity (offset and regression coefficient, i.e., slope), average offset, systematic error, and random error of all four modalities were calculated for each axis. Linearity was similar for all four modalities, with regression coefficients between 0.994 and 1.012, and all offsets below 1 mm. The systematic errors of skin markers and 3D-US were higher than for kV-CBCT, but random errors were similar. In particular, 3D-US demonstrated an average offset of 0.36 mm to the right, 0.08 mm inferiorly, and 0.15 mm anteriorly; the systematic error was 0.36 mm laterally, 0.35 mm longitudinally, and 0.22 mm vertically; the random error was 0.15 mm laterally, 0.30 mm longitudinally, and 0.12 mm vertically. A total of 109 out of 110 (99 %) 3D-US measurements were within 1 mm of the consensus value on either axis. The linearity of 3D-US was no worse than that of skin

  16. Simplified 3D model of a PWR reactor vessel using fluid dynamics code ANSYS CFX computational; Modelo simplificado 3D de la vasija de un reactor PWR mediante el codigo de dinamica de fluidos computacional ANSYS CFX

    Energy Technology Data Exchange (ETDEWEB)

    Martinez, M.; Miro, R.; Barrachina, T.; Verdu, G.

    2011-07-01

    This paper presents the results from the calculation of the steady state simulation with model of CFD (computational fluid dynamic) operating under conditions of operation at full power (Hot Full Power). Development and the CFD model results show the usefulness of these codes for calculating 3D of the variable thermohydraulics of these reactors.

  17. Recent advances in analysis and prediction of Rock Falls, Rock Slides, and Rock Avalanches using 3D point clouds

    Science.gov (United States)

    Abellan, A.; Carrea, D.; Jaboyedoff, M.; Riquelme, A.; Tomas, R.; Royan, M. J.; Vilaplana, J. M.; Gauvin, N.

    2014-12-01

    The acquisition of dense terrain information using well-established 3D techniques (e.g. LiDAR, photogrammetry) and the use of new mobile platforms (e.g. Unmanned Aerial Vehicles) together with the increasingly efficient post-processing workflows for image treatment (e.g. Structure From Motion) are opening up new possibilities for analysing, modeling and predicting rock slope failures. Examples of applications at different scales ranging from the monitoring of small changes at unprecedented level of detail (e.g. sub millimeter-scale deformation under lab-scale conditions) to the detection of slope deformation at regional scale. In this communication we will show the main accomplishments of the Swiss National Foundation project "Characterizing and analysing 3D temporal slope evolution" carried out at Risk Analysis group (Univ. of Lausanne) in close collaboration with the RISKNAT and INTERES groups (Univ. of Barcelona and Univ. of Alicante, respectively). We have recently developed a series of innovative approaches for rock slope analysis using 3D point clouds, some examples include: the development of semi-automatic methodologies for the identification and extraction of rock-slope features such as discontinuities, type of material, rockfalls occurrence and deformation. Moreover, we have been improving our knowledge in progressive rupture characterization thanks to several algorithms, some examples include the computing of 3D deformation, the use of filtering techniques on permanently based TLS, the use of rock slope failure analogies at different scales (laboratory simulations, monitoring at glacier's front, etc.), the modelling of the influence of external forces such as precipitation on the acceleration of the deformation rate, etc. We have also been interested on the analysis of rock slope deformation prior to the occurrence of fragmental rockfalls and the interaction of this deformation with the spatial location of future events. In spite of these recent advances

  18. 3-D Cartesian Geometric Moment Computation using Morphological Operations and its Application to Object Classification

    OpenAIRE

    H. Sossa Azuela; F.J. Cuevas; C. Aguilar Ibañez; H. Benítez Muñoz

    2007-01-01

    Use of network al location costs by shift factors and MW-Mile method is re ported in this pa -per. Conventional shift factors are computed based on DC power flow. DC power flow re quires to selecting a slack busin order to avoid matrix singularity. There fore, shift fac tors are slack bus de pendent. In order to evade slack bus dependency, two approaches are considered Use of network al location costs by shift factors and MW-Mile method is reported in this paper. Conventional shift factors ar...

  19. ALGEBRAIC TURBULENCE MODEL WITH MEMORY FOR COMPUTATION OF 3-D TURBULENT BOUNDARY LAYERS WITH VALIDATION

    Institute of Scientific and Technical Information of China (English)

    2000-01-01

    Additional equations were found based on experiments for an algebraic turbulence model to improve the prediction of the behavior of three dimensional turbulent boundary layers by taking account of the effects of pressure gradient and the historical variation of eddy viscosity, so the model is with memory. Numerical calculation by solving boundary layer equations was carried out for the five pressure driven three dimensional turbulent boundary layers developed on flat plates, swept-wing, and prolate spheroid in symmetrical plane. Comparing the computational results with the experimental data, it is obvious that the prediction will be more accurate if the proposed closure equations are used, especially for the turbulent shear stresses.

  20. Computer simulation of 2-D and 3-D ion beam extraction and acceleration

    Energy Technology Data Exchange (ETDEWEB)

    Ido, Shunji; Nakajima, Yuji [Saitama Univ., Urawa (Japan). Faculty of Engineering

    1997-03-01

    The two-dimensional code and the three-dimensional code have been developed to study the physical features of the ion beams in the extraction and acceleration stages. By using the two-dimensional code, the design of first electrode(plasma grid) is examined in regard to the beam divergence. In the computational studies by using the three-dimensional code, the axis-off model of ion beam is investigated. It is found that the deflection angle of ion beam is proportional to the gap displacement of the electrodes. (author)

  1. Computational studies of hard-body and 3-D effects in plume flows

    Science.gov (United States)

    Venkatapathy, Ethiraj; Feiereisen, William J.; Obayashi, Shigeru

    1989-01-01

    Axisymmetric and three-dimensional, multi-nozzle plume flows around generic rocket geometries are investigated with a three-dimensional Navier-Stokes solver to study the interactive effects between hard body and the plume. Time-asymptotic, laminar, ideal-gas solutions obtained with a two-factor, flux-split scheme and a diagonal, upwind scheme are presented. Computed solutions to three-dimensional, multi-nozzle problems and single-nozzle, axisymmetric problems demonstrate flow field features including three-dimensionality and hard-body effects. Geometry and three-dimensional effects are shown to be significant in multi-nozzle flows.

  2. Semi-automated 3D leaf reconstruction and analysis of trichome patterning from light microscopic images.

    Directory of Open Access Journals (Sweden)

    Henrik Failmezger

    2013-04-01

    Full Text Available Trichomes are leaf hairs that are formed by single cells on the leaf surface. They are known to be involved in pathogen resistance. Their patterning is considered to emerge from a field of initially equivalent cells through the action of a gene regulatory network involving trichome fate promoting and inhibiting factors. For a quantitative analysis of single and double mutants or the phenotypic variation of patterns in different ecotypes, it is imperative to statistically evaluate the pattern reliably on a large number of leaves. Here we present a method that enables the analysis of trichome patterns at early developmental leaf stages and the automatic analysis of various spatial parameters. We focus on the most challenging young leaf stages that require the analysis in three dimensions, as the leaves are typically not flat. Our software TrichEratops reconstructs 3D surface models from 2D stacks of conventional light-microscope pictures. It allows the GUI-based annotation of different stages of trichome development, which can be analyzed with respect to their spatial distribution to capture trichome patterning events. We show that 3D modeling removes biases of simpler 2D models and that novel trichome patterning features increase the sensitivity for inter-accession comparisons.

  3. 3D visualisation and analysis of single and coalescing tracks in Solid state Nuclear Track Detectors

    Science.gov (United States)

    Wertheim, David; Gillmore, Gavin; Brown, Louise; Petford, Nick

    2010-05-01

    Exposure to radon gas (222Rn) and associated ionising decay products can cause lung cancer in humans (1). Solid state Nuclear Track Detectors (SSNTDs) can be used to monitor radon concentrations (2). Radon particles form tracks in the detectors and these tracks can be etched in order to enable 2D surface image analysis. We have previously shown that confocal microscopy can be used for 3D visualisation of etched SSNTDs (3). The aim of the study was to further investigate track angles and patterns in SSNTDs. A 'LEXT' confocal laser scanning microscope (Olympus Corporation, Japan) was used to acquire 3D image datasets of five CR-39 plastic SSNTD's. The resultant 3D visualisations were analysed by eye and inclination angles assessed on selected tracks. From visual assessment, single isolated tracks as well as coalescing tracks were observed on the etched detectors. In addition varying track inclination angles were observed. Several different patterns of track formation were seen such as single isolated and double coalescing tracks. The observed track angles of inclination may help to assess the angle at which alpha particles hit the detector. Darby, S et al. Radon in homes and risk of lung cancer : collaborative analysis of individual data from 13 European case-control studies. British Medical Journal 2005; 330, 223-226. Phillips, P.S., Denman, A.R., Crockett, R.G.M., Gillmore, G., Groves-Kirkby, C.J., Woolridge, A., Comparative Analysis of Weekly vs. Three monthly radon measurements in dwellings. DEFRA Report No., DEFRA/RAS/03.006. (2004). Wertheim D, Gillmore G, Brown L, and Petford N. A new method of imaging particle tracks in Solid State Nuclear Track Detectors. Journal of Microscopy 2010; 237: 1-6.

  4. Comparison of predicting drag methods using computational fluid dynamics in 2d/3d viscous flow

    Institute of Scientific and Technical Information of China (English)

    ZHU; ZiQiang; WANG; XiaoLu; LIU; Jie; LIU; Zhou

    2007-01-01

    As a result of the necessity of aircraft engineering design and the progress of computational fluid dynamics (CFD), techniques of accurately predicting aerodynamic drag are being increasingly explored. According to the momentum balance, the drag can be represented by an integral over a cross-flow plane (called wake integration method) at an arbitrary distance behind the configuration. A formulation to reduce the size of the wake cross plane region required for calculating the drag is developed by using cutoff parameters of vorticity and entropy. This increases the calculation accuracy and decreases the computation time required. Numerical experiments are made to obtain the threshold values of these cutoff parameters. The wake integration method is applied to predict drags of some examples including airfoil, a variety of wings and wing-body combination. Numerical results are compared with those of traditional surface integration method, showing that the predicting drag values with the wake integration method are closer to the experimental data. The results also show that drag prediction within engineering accuracy is possible by using CFD and the numerical drag optimization of complex aircraft configurations is possible, too.

  5. 3D kinematic analysis and clinical evaluation of neck movements in patients with whiplash injury.

    Science.gov (United States)

    Antonaci, F; Bulgheroni, M; Ghirmai, S; Lanfranchi, S; Dalla Toffola, E; Sandrini, G; Nappi, G

    2002-09-01

    In recent decades whiplash injuries, being a major reason for compensation claims, have become increasingly important in forensic medicine. In view of this, a reliable diagnostic method of assessing cervical range of motion (ROM) is needed. The aim of the present study was to evaluate neck function with a 3D kinematic method compared with clinical evaluation in whiplash injury. Seventy consecutive patients (M/F = 18/52) with a history of whiplash injury (WH) and 46 healthy volunteers (M/F = 24/22), mean age, respectively 33 +/- 9 and 28 +/- 6 years (mean+/-SD) entered the study. Patients suffered from neck pain and/or unilateral headache. A computerized kinematic analysis of the ROM (Elite system) using passive markers and two infrared TV cameras was used. Clinical evaluation of active ROM was also performed both in patients and in 61 controls (M/F = 23/38; mean age 47 +/- 18 years). Thirty out of 70 patients were tested at the time of their first consultation (T0) and 6 months later (T6), and 12 were also followed up after a year (T12). All neck movements, except extension, were significantly reduced in WH subjects compared with controls, in particular lateral bending. Comparing ROM at T0, T6 and T12, no significant differences were found. A global index of motion (GIM), obtained by calculating the sum of ROM in absolute value for all the movements acquired, was significantly reduced in WH compared with control subjects. The interobserver reliability of the clinical evaluation was globally acceptable. On the basis of the clinical evaluation, a significantly reduced ROM was found in all movements in WH subjects compared with an age-matched population. Computing the number of impaired cervical movements (ICMs), a significantly higher number was observed in WH patients than in controls, showing a decreasing trend at T6 and T12, with a significant improvement at T6 vs. T0. The computerized study of neck ROM may constitute a useful tool in the evaluation of WH at

  6. THEORETICAL ANALYSIS OF COORDINATES MEASUREMENT BY FLEXIBLE 3D MEASURING SYSTEM

    Institute of Scientific and Technical Information of China (English)

    ZHANG Guoyu; SUN Tianxiang; WANG Lingyun; XU Xiping

    2007-01-01

    The system mathematical model of flexible 3D measuring system is built by theoretical analysis, and the theoretical formula for measuring space point coordinate is also derived.Frog-jumping based coordinate transform method is put forward in order to solve measuring problem for large size parts. The flog-jumping method is discussed, and the coordinate transform mathematical model is method of the space point coordinate compared to original value, and an advanced method is provided. Form the space point coordinate transform formula can derive the calculation measuring method for measuring large size parts.

  7. 3-D in vivo brain tumor geometry study by scaling analysis

    Science.gov (United States)

    Torres Hoyos, F.; Martín-Landrove, M.

    2012-02-01

    A new method, based on scaling analysis, is used to calculate fractal dimension and local roughness exponents to characterize in vivo 3-D tumor growth in the brain. Image acquisition was made according to the standard protocol used for brain radiotherapy and radiosurgery, i.e., axial, coronal and sagittal magnetic resonance T1-weighted images, and comprising the brain volume for image registration. Image segmentation was performed by the application of the k-means procedure upon contrasted images. We analyzed glioblastomas, astrocytomas, metastases and benign brain tumors. The results show significant variations of the parameters depending on the tumor stage and histological origin.

  8. Object data mining and analysis on 3D images of high precision industrial CT

    International Nuclear Information System (INIS)

    There are some areas of interest on 3D images of the high precision industrial CT, such as defects caused during the production process. In order to take a close analysis of these areas, the image processing software Amira was used on the data of a particular work piece sample to do defects segmentation and display, defects measurement. evaluation and documentation. A data set obtained by scanning a vise sample using the lab CT system was analyzed and the results turn out to be fairly good. (authors)

  9. Analysis of the Possibilities of Using Low-Cost Scanning System in 3d Modeling

    Science.gov (United States)

    Kedzierski, M.; Wierzbickia, D.; Fryskowska, A.; Chlebowska, B.

    2016-06-01

    The laser scanning technique is still a very popular and fast growing method of obtaining information on modeling 3D objects. The use of low-cost miniature scanners creates new opportunities for small objects of 3D modeling based on point clouds acquired from the scan. The same, the development of accuracy and methods of automatic processing of this data type is noticeable. The article presents methods of collecting raw datasets in the form of a point-cloud using a low-cost ground-based laser scanner FabScan. As part of the research work 3D scanner from an open source FabLab project was constructed. In addition, the results for the analysis of the geometry of the point clouds obtained by using a low-cost laser scanner were presented. Also, some analysis of collecting data of different structures (made of various materials such as: glass, wood, paper, gum, plastic, plaster, ceramics, stoneware clay etc. and of different shapes: oval and similar to oval and prism shaped) have been done. The article presents two methods used for analysis: the first one - visual (general comparison between the 3D model and the real object) and the second one - comparative method (comparison between measurements on models and scanned objects using the mean error of a single sample of observations). The analysis showed, that the low-budget ground-based laser scanner FabScan has difficulties with collecting data of non-oval objects. Items built of glass painted black also caused problems for the scanner. In addition, the more details scanned object contains, the lower the accuracy of the collected point-cloud is. Nevertheless, the accuracy of collected data (using oval-straight shaped objects) is satisfactory. The accuracy, in this case, fluctuates between ± 0,4 mm and ± 1,0 mm whereas when using more detailed objects or a rectangular shaped prism the accuracy is much more lower, between 2,9 mm and ± 9,0 mm. Finally, the publication presents the possibility (for the future expansion of

  10. ANALYSIS OF THE POSSIBILITIES OF USING LOW-COST SCANNING SYSTEM IN 3D MODELING

    Directory of Open Access Journals (Sweden)

    M. Kedzierski

    2016-06-01

    Full Text Available The laser scanning technique is still a very popular and fast growing method of obtaining information on modeling 3D objects. The use of low-cost miniature scanners creates new opportunities for small objects of 3D modeling based on point clouds acquired from the scan. The same, the development of accuracy and methods of automatic processing of this data type is noticeable. The article presents methods of collecting raw datasets in the form of a point-cloud using a low-cost ground-based laser scanner FabScan. As part of the research work 3D scanner from an open source FabLab project was constructed. In addition, the results for the analysis of the geometry of the point clouds obtained by using a low-cost laser scanner were presented. Also, some analysis of collecting data of different structures (made of various materials such as: glass, wood, paper, gum, plastic, plaster, ceramics, stoneware clay etc. and of different shapes: oval and similar to oval and prism shaped have been done. The article presents two methods used for analysis: the first one - visual (general comparison between the 3D model and the real object and the second one - comparative method (comparison between measurements on models and scanned objects using the mean error of a single sample of observations. The analysis showed, that the low-budget ground-based laser scanner FabScan has difficulties with collecting data of non-oval objects. Items built of glass painted black also caused problems for the scanner. In addition, the more details scanned object contains, the lower the accuracy of the collected point-cloud is. Nevertheless, the accuracy of collected data (using oval-straight shaped objects is satisfactory. The accuracy, in this case, fluctuates between ± 0,4 mm and ± 1,0 mm whereas when using more detailed objects or a rectangular shaped prism the accuracy is much more lower, between 2,9 mm and ± 9,0 mm. Finally, the publication presents the possibility (for the

  11. General beam cross-section analysis using a 3D finite element slice

    DEFF Research Database (Denmark)

    Couturier, Philippe; Krenk, Steen

    2014-01-01

    an analytical solution is available. The paper also shows an application to wind turbine blade cross-sections and discusses the effect of the finite element discretization on the cross-section properties such as stiffness parameters and the location of the elastic and shear centers.......A formulation for analysis of general cross-section properties has been developed. This formulation is based on the stress-strain states in the classic six equilibrium modes of a beam by considering a finite thickness slice modelled by a single layer of 3D finite elements. The displacement...

  12. 3D television theory and circuit analysis%3D电视的原理及电路解析

    Institute of Scientific and Technical Information of China (English)

    常成祥

    2012-01-01

    2009年12月,随着阿凡达的大热,消费者对3D的狂热在国际上掀起一轮3D热潮。在3D电影的促动下,3D市场已于2010年开始起飞。而且随着全球消费电子厂商陆续推出一批包括电视机、监视器、笔记本电脑、蓝光盘播放器、数码相机、摄像机、电子相框等3D相关产品进军家庭市场。据DisplaySearch的市场调研数据显示,2010年3D电视全球出货量达到420万台。2011年全球3D电视货量达2 340万台,2014年预计将出货达9 000万台。中国的3D电视产业发展备受业内外人士关注,我国不仅是全球最大的平板电视市场,更是全球最大的彩电制造基地。从平板电视到互联网电视再到3D电视,每一次技术升级,国内彩电企业总是紧跟而上。2010年3月,TCL、创维等企业开始推出3D电视;随后在9月份,海信推出了融合网络多媒体技术、3D显示技术的LED背光电视;康佳一举推出4大系列、20多款智能3D电视。文中主要阐述3D电视的原理及技术分类,并以康佳988系列3D电视为例,解析3D部分电路。%In 2009 December,with the avatar’s hit,consumers of 3D fever in the world set off a new upsurge of 3D.In 3D film to promote,the 3D market has been started in 2010 to take off.But as the global consumer electronics manufacturers have launched a group including televisions,monitors,notebook computer,the blue disc player,digital camera,video camera,digital photo frame and other 3D related products to enter the domestic market.According to the DisplaySearch market research data show,the 2010 3D TV global shipments reached 4 200 000.The 2011 global 3D TV volume amounted to 23 400 000.2014 is expected to ship90 000 000 China’s 3D TV industry producing get attention of people outside.our country is not only the world’s largest flat panel TV market,is the world’s largest color TV manufacturing base.From the flat panel TV to the Internet television and3D television,every time the

  13. 3D CFD computations of transitional flows using DES and a correlation based transition model

    DEFF Research Database (Denmark)

    Sørensen, Niels N.

    process can be important for the aerodynamic performance. Today, the most widespread approach is to use fully turbulent computations, where the transitional process is ignored and the entire boundary layer on the wings or airfoils is handled by the turbulence model. The correlation based transition model......The report describes the application of the correlation based transition model of of Menter et. al. [1, 2] to the cylinder drag crisis and the stalled flow over an DU-96-W-351 airfoil using the DES methodology. When predicting the flow over airfoils and rotors, the laminar-turbulent transition...... has lately shown promising results, and the present paper describes the application of the model to predict the drag and shedding frequency for flow around a cylinder from sub to super-critical Reynolds numbers. Additionally, the model is applied to the flow around the DU-96 airfoil, at high angles...

  14. 3D Simulation of Storm Surge Disaster Based on Scenario Analysis

    Institute of Scientific and Technical Information of China (English)

    王晓玲; 孙小沛; 张胜利; 孙蕊蕊; 李瑞金; 朱泽彪

    2016-01-01

    The occurrence of storm surge disaster is often accompanied with floodplain, overflow, dike breach and other complex phenomena, while current studies on storm surge flooding are more concentrated on the 1D/2D numerical simulation of single disaster scenario (floodplain, overflow or dike breach), ignoring the composite ef-fects of various phenomena. Therefore, considering the uncertainty in the disaster process of storm surge, scenario analysis was firstly proposed to identify the composite disaster scenario including multiple phenomena by analyzing key driving forces, building scenario matrix and deducing situation logic. Secondly, by combining the advantages of k-ωand k-εmodels in the wall treatment, a shear stress transmission k-ωmodel coupled with VOF was proposed to simulate the 3D flood routing for storm surge disaster. Thirdly, risk degree was introduced to make the risk analysis of storm surge disaster. Finally, based on the scenario analysis, four scenarios with different storm surge intensity (100-year and 200-year frequency) were identified in Tianjin Binhai New Area. Then, 3D numerical simulation and risk map were made for the case.

  15. 3D imaging of the Corinth rift from a new passive seismic tomography and receiver function analysis

    Science.gov (United States)

    Godano, Maxime; Gesret, Alexandrine; Noble, Mark; Lyon-Caen, Hélène; Gautier, Stéphanie; Deschamps, Anne

    2016-04-01

    The Corinth Rift is the most seismically active zone in Europe. The area is characterized by very localized NS extension at a rate of ~ 1.5cm/year, the occurrence of frequent and intensive microseismic crises and occasional moderate to large earthquakes like in 1995 (Mw=6.1). Since the year 2000, the Corinth Rift Laboratory (CRL, http://crlab.eu) consisting in a multidisciplinary natural observatory, aims at understanding the mechanics of faulting and earthquake nucleation in the Rift. Recent studies have improved our view about fault geometry and mechanics within CRL, but there is still a critical need for a better knowledge of the structure at depth both for the accuracy of earthquake locations and for mechanical interpretation of the seismicity. In this project, we aim to analyze the complete seismological database (13 years of recordings) of CRL by using recently developed methodologies of structural imaging, in order to determine at the same time and with high resolution, the local 3D structure and the earthquake locations. We perform an iterative joint determination of 3D velocity model and earthquake coordinates. In a first step, P and S velocity models are determined using first arrival time tomography method proposed by Taillandier et al. (2009). It consists in the minimization of the cost function between observed and theoretical arrival times which is achieved by the steepest descent method (e.g. Tarantola 1987). This latter requires computing the gradient of the cost function by using the adjoint state method (Chavent 1974). In a second step, earthquakes are located in the new velocity model with a non-linear inversion method based on a Bayesian formulation (Gesret et al. 2015). Step 1 and 2 are repeated until the cost function no longer decreases. We present preliminary results consisting in: (1) the adjustement of a 1D velocity model that is used as initial model of the 3D tomography and (2) a first attempt of the joint determination of 3D velocity

  16. 3D time-dependent flow computations using a molecular stress function model with constraint release

    DEFF Research Database (Denmark)

    Rasmussen, Henrik Koblitz

    2002-01-01

    The numerical simulation of time dependent viscoelastic flow (in three dimensions) is of interest in connection with a variety of polymer processing operations. The application of the numerical simulation techniques is in the analysis and design of polymer processing problems. This is operations...

  17. Effects of Electrode Position on Spatiotemporal Auditory Nerve Fiber Responses: A 3D Computational Model Study

    Directory of Open Access Journals (Sweden)

    Soojin Kang

    2015-01-01

    Full Text Available A cochlear implant (CI is an auditory prosthesis that enables hearing by providing electrical stimuli through an electrode array. It has been previously established that the electrode position can influence CI performance. Thus, electrode position should be considered in order to achieve better CI results. This paper describes how the electrode position influences the auditory nerve fiber (ANF response to either a single pulse or low- (250 pulses/s and high-rate (5,000 pulses/s pulse-trains using a computational model. The field potential in the cochlea was calculated using a three-dimensional finite-element model, and the ANF response was simulated using a biophysical ANF model. The effects were evaluated in terms of the dynamic range, stochasticity, and spike excitation pattern. The relative spread, threshold, jitter, and initiated node were analyzed for single-pulse response; and the dynamic range, threshold, initiated node, and interspike interval were analyzed for pulse-train stimuli responses. Electrode position was found to significantly affect the spatiotemporal pattern of the ANF response, and this effect was significantly dependent on the stimulus rate. We believe that these modeling results can provide guidance regarding perimodiolar and lateral insertion of CIs in clinical settings and help understand CI performance.

  18. Large-scale computer-generated absorption holograms of 3D objects: II. Practical methodology

    Science.gov (United States)

    Phillips, Nicholas J.; Cameron, Colin D.; Dodd, Adrian K.; Payne, Douglas A.; Sheerin, David T.; Slinger, Christopher W.

    1999-03-01

    As a support to the advances in theoretical understanding and computational methods, we describe a new laser plotter technique that enables, in principle, an unlimited size of pixel array to be plotted efficiently with a rigorous estimate of duration of the plot run time. Developments in laser plotter design are presented that allow the formation of pixellated holographic structures of high precision (c. 1 - 10 micron pixel dia.) with an accompanying high pixel count (e.g. at least up to, and beyond, 104 per side within a square array). The case of absorption holograms offers an easy route to a good quality result. We can then exploit the many tricks of amplitude holography borrowed from lithographic and holographic experience using ultra-fine grain silver halide materials. The problem of exposure quantization and linearization is addressed in a pragmatic fashion. The central issue of why such holograms can tolerate intrinsic diffraction artifacts within each pixel is considered along with the exposure level quantization -- it is difficult to print individual pixels within which the optical density is clinically uniform. We cannot over-estimate the reliability difficulties that can arise in a system designed to print massive arrays of pixels in a serial fashion. The electronic testing involved has to be associated with error-free repeatability and high accompanying switching speeds. This may look easy but it is the major issue that distinguishes serially printed digital holography from the simple one-step parallel process of forming the ordinary hologram.

  19. Linearized FUN3D for Rapid Aeroelastic and Aeroservoelastic Design and Analysis Project

    Data.gov (United States)

    National Aeronautics and Space Administration — The overall objective of this Phase I project is to develop a hybrid approach in FUN3D, referred herein to as the Linearized FUN3D, for rapid aeroelastic and...

  20. Developments in the analysis of 3D piping and shells by means of PAULA code

    International Nuclear Information System (INIS)

    Non linear analyses of three dimensional piping and shells are becoming more and more common, in the safety analysis of nuclear power plants. The pipe whip accident, the Hypothetic core Distruptive Accident (HCDA) for LMFBR represent, two significative examples, where non linear analyses of the pressure boundary have been used with considerable success. Seismic analysis and other extreme loading of conditions are other cases, where non linear analyses have been used even if not extensively due to cost reasons. The authors have presented a code, named PAULA to deal with the 3D non linear analysis of piping; it is the aim of this paper to briefly describe the basic library of PAULA and to describe the new shell elements in some more detail. (orig./GL)

  1. Analysis of Impact of 3D Printing Technology on Traditional Manufacturing Technology

    Science.gov (United States)

    Wu, Niyan; Chen, Qi; Liao, Linzhi; Wang, Xin

    With quiet rise of 3D printing technology in automobile, aerospace, industry, medical treatment and other fields, many insiders hold different opinions on its development. This paper objectively analyzes impact of 3D printing technology on mold making technology and puts forward the idea of fusion and complementation of 3D printing technology and mold making technology through comparing advantages and disadvantages of 3D printing mold and traditional mold making technology.

  2. 3-D analysis of semiconductor dopant distributions in a patterned structure using LEAP

    Energy Technology Data Exchange (ETDEWEB)

    Moore, J.S. [Department of Materials Science and Engineering, University of Florida, P.O. Box 116130, 525 Engineering Builing, Gainesville, FL 32611 (United States)], E-mail: jsm200@ufl.edu; Jones, K.S. [Department of Materials Science and Engineering, University of Florida, P.O. Box 116130, 525 Engineering Builing, Gainesville, FL 32611 (United States); Kennel, H.; Corcoran, S. [Intel Corporation, Hillsboro, OR (United States)

    2008-05-15

    This work presents the first 3-D analysis of lateral dopant diffusion in a patterned structure using a pulsed laser-assisted local electrode atom probe (LEAP). A structure similar to a device channel was created for this work by performing a 3 keV, 1x10{sup 15} cm{sup -2} As{sup +} implant on a poly-Si line patterned wafer with 70 nm line width and 200 nm line pitch. The wafer was subsequently annealed at 950 deg. C for 1 s. LEAP samples were made using a site-selective in-situ focused ion beam (FIB) process. The results from LEAP analysis were then compared with high-resolution transmission electron microscopy (HRTEM) and Florida object-oriented process simulator (FLOOPS) results. Good structural agreement was found between the LEAP and HRTEM results. Several 1-D As concentration profiles extracted from the LEAP data were also found to be in good agreement with FLOOPS process simulation results. These profiles also represent for the first time that results from a 3-D process simulator have been able to be confirmed experimentally using a single sample.

  3. 3D finite element model of the diabetic neuropathic foot: a gait analysis driven approach.

    Science.gov (United States)

    Guiotto, Annamaria; Sawacha, Zimi; Guarneri, Gabriella; Avogaro, Angelo; Cobelli, Claudio

    2014-09-22

    Diabetic foot is an invalidating complication of diabetes that can lead to foot ulcers. Three-dimensional (3D) finite element analysis (FEA) allows characterizing the loads developed in the different anatomical structures of the foot in dynamic conditions. The aim of this study was to develop a subject specific 3D foot FE model (FEM) of a diabetic neuropathic (DNS) and a healthy (HS) subject, whose subject specificity can be found in term of foot geometry and boundary conditions. Kinematics, kinetics and plantar pressure (PP) data were extracted from the gait analysis trials of the two subjects with this purpose. The FEM were developed segmenting bones, cartilage and skin from MRI and drawing a horizontal plate as ground support. Materials properties were adopted from previous literature. FE simulations were run with the kinematics and kinetics data of four different phases of the stance phase of gait (heel strike, loading response, midstance and push off). FEMs were then driven by group gait data of 10 neuropathic and 10 healthy subjects. Model validation focused on agreement between FEM-simulated and experimental PP. The peak values and the total distribution of the pressures were compared for this purpose. Results showed that the models were less robust when driven from group data and underestimated the PP in each foot subarea. In particular in the case of the neuropathic subject's model the mean errors between experimental and simulated data were around the 20% of the peak values. This knowledge is crucial in understanding the aetiology of diabetic foot.

  4. Shape Analysis of 3D Head Scan Data for U.S. Respirator Users

    Directory of Open Access Journals (Sweden)

    Slice DennisE

    2010-01-01

    Full Text Available In 2003, the National Institute for Occupational Safety and Health (NIOSH conducted a head-and-face anthropometric survey of diverse, civilian respirator users. Of the 3,997 subjects measured using traditional anthropometric techniques, surface scans and 26 three-dimensional (3D landmark locations were collected for 947 subjects. The objective of this study was to report the size and shape variation of the survey participants using the 3D data. Generalized Procrustes Analysis (GPA was conducted to standardize configurations of landmarks associated with individuals into a common coordinate system. The superimposed coordinates for each individual were used as commensurate variables that describe individual shape and were analyzed using Principal Component Analysis (PCA to identify population variation. The first four principal components (PC account for 49% of the total sample variation. The first PC indicates that overall size is an important component of facial variability. The second PC accounts for long and narrow or short and wide faces. Longer narrow orbits versus shorter wider orbits can be described by PC3, and PC4 represents variation in the degree of ortho/prognathism. Geometric Morphometrics provides a detailed and interpretable assessment of morphological variation that may be useful in assessing respirators and devising new test and certification standards.

  5. 3D Reconstruction of Intricate Archean Microbial Structures Using Neutron Computed Tomography and Serial Sectioning

    Science.gov (United States)

    Huerta, N. J.; Murphy, M. A.; Natarajan, V.; Weber, G.; Hamann, B.; Sumner, D. Y.

    2005-12-01

    Three-dimensional visualization of intricate microbial structures in rocks is essential to understand the growth of ancient microbial communities. We have imaged and reconstructed the three-dimensional morphology of 2.5-2.6 billion year old intricate microbialites preserved in carbonate using both serial sectioning and neutron computed tomography (NCT). Reconstruction techniques vary with data type and sample preservation. NCT is a non-destructive technique for imaging organic-containing samples with sufficiently high hydrogen concentrations. The resolution of reconstruction is finer than 500 microns. We reconstructed microbialites preserved as organic inclusions in calcite using NCT. Reconstructions are interpreted using volume rendering, segmentation, and an interactive Matlab/visualization environment. Visualizations demonstrate the intricacy of the structures. Noise currently limits automatic growth surface extraction, but growth of structures can be qualitatively evaluated. One of the largest obstacles to date is efficient manipulation of large data sets. Our current visualization approach always renders the supplied data set at full resolution, which requires down-sampling of datasets larger than 256 pixels3 (acquired volume data consists of up to 2048 pixels3) to isolate regions of interest and extract important features. We are exploring the use of multi-resolution techniques that store a dataset at different levels of detail and chose an appropriate resolution during user-interaction. Such an approach will allow us to visualize raw data at full resolution. Serial sectioning and scanning successive horizons provides reconstructions of samples lacking sufficient hydrogen for NCT. This technique destroys the sample and has a lower resolution than NCT. However, intricate networks of microbial laminae surrounded by cement-filled voids can be characterized using this technique. After microbial surfaces are manually interpreted on slices, the images lack noise

  6. Efficient computational methods for electromagnetic imaging with applications to 3D magnetotellurics

    Science.gov (United States)

    Kordy, Michal Adam

    The motivation for this work is the forward and inverse problem for magnetotellurics, a frequency domain electromagnetic remote-sensing geophysical method used in mineral, geothermal, and groundwater exploration. The dissertation consists of four papers. In the first paper, we prove the existence and uniqueness of a representation of any vector field in H(curl) by a vector lying in H(curl) and H(div). It allows us to represent electric or magnetic fields by another vector field, for which nodal finite element approximation may be used in the case of non-constant electromagnetic properties. With this approach, the system matrix does not become ill-posed for low-frequency. In the second paper, we consider hexahedral finite element approximation of an electric field for the magnetotelluric forward problem. The near-null space of the system matrix for low frequencies makes the numerical solution unstable in the air. We show that the proper solution may obtained by applying a correction on the null space of the curl. It is done by solving a Poisson equation using discrete Helmholtz decomposition. We parallelize the forward code on multicore workstation with large RAM. In the next paper, we use the forward code in the inversion. Regularization of the inversion is done by using the second norm of the logarithm of conductivity. The data space Gauss-Newton approach allows for significant savings in memory and computational time. We show the efficiency of the method by considering a number of synthetic inversions and we apply it to real data collected in Cascade Mountains. The last paper considers a cross-frequency interpolation of the forward response as well as the Jacobian. We consider Pade approximation through model order reduction and rational Krylov subspace. The interpolating frequencies are chosen adaptively in order to minimize the maximum error of interpolation. Two error indicator functions are compared. We prove a theorem of almost always lucky failure in the

  7. Robust object tracking techniques for vision-based 3D motion analysis applications

    Science.gov (United States)

    Knyaz, Vladimir A.; Zheltov, Sergey Y.; Vishnyakov, Boris V.

    2016-04-01

    Automated and accurate spatial motion capturing of an object is necessary for a wide variety of applications including industry and science, virtual reality and movie, medicine and sports. For the most part of applications a reliability and an accuracy of the data obtained as well as convenience for a user are the main characteristics defining the quality of the motion capture system. Among the existing systems for 3D data acquisition, based on different physical principles (accelerometry, magnetometry, time-of-flight, vision-based), optical motion capture systems have a set of advantages such as high speed of acquisition, potential for high accuracy and automation based on advanced image processing algorithms. For vision-based motion capture accurate and robust object features detecting and tracking through the video sequence are the key elements along with a level of automation of capturing process. So for providing high accuracy of obtained spatial data the developed vision-based motion capture system "Mosca" is based on photogrammetric principles of 3D measurements and supports high speed image acquisition in synchronized mode. It includes from 2 to 4 technical vision cameras for capturing video sequences of object motion. The original camera calibration and external orientation procedures provide the basis for high accuracy of 3D measurements. A set of algorithms as for detecting, identifying and tracking of similar targets, so for marker-less object motion capture is developed and tested. The results of algorithms' evaluation show high robustness and high reliability for various motion analysis tasks in technical and biomechanics applications.

  8. Mechanical analysis of single myocyte contraction in a 3-D elastic matrix.

    Directory of Open Access Journals (Sweden)

    John Shaw

    Full Text Available BACKGROUND: Cardiac myocytes experience mechanical stress during each heartbeat. Excessive mechanical stresses under pathological conditions cause functional and structural remodeling that lead to heart diseases, yet the precise mechanisms are still incompletely understood. To study the cellular and molecular level mechanotransduction mechanisms, we developed a new 'cell-in-gel' experimental system to exert multiaxial (3-D stresses on a single myocyte during active contraction. METHODS: Isolated myocytes are embedded in an elastic hydrogel to simulate the mechanical environment in myocardium (afterload. When electrically stimulated, the in-gel myocyte contracts while the matrix resists shortening and broadening of the cell, exerting normal and shear stresses on the cell. Here we provide a mechanical analysis, based on the Eshelby inclusion problem, of the 3-D strain and stress inside and outside the single myocyte during contraction in an elastic matrix. RESULTS: (1 The fractional shortening of the myocyte depends on the cell's geometric dimensions and the relative stiffness of the cell to the gel. A slender or softer cell has less fractional shortening. A myocyte of typical dimensions embedded in a gel of similar elastic stiffness can contract only 20% of its load-free value. (2 The longitudinal stress inside the cell is about 15 times the transverse stress level. (3 The traction on the cell surface is highly non-uniform, with a maximum near its ends, showing 'hot spots' at the location of intercalated disks. (4 The mechanical energy expenditure of the myocyte increases with the matrix stiffness in a monotonic and nonlinear manner. CONCLUSION: Our mechanical analyses provide analytic solutions that readily lend themselves to parametric studies. The resulting 3-D mapping of the strain and stress states serve to analyze and interpret ongoing cell-in-gel experiments, and the mathematical model provides an essential tool to decipher and quantify

  9. 3D geometry analysis of the medial meniscus--a statistical shape modeling approach.

    Science.gov (United States)

    Vrancken, A C T; Crijns, S P M; Ploegmakers, M J M; O'Kane, C; van Tienen, T G; Janssen, D; Buma, P; Verdonschot, N

    2014-10-01

    The geometry-dependent functioning of the meniscus indicates that detailed knowledge on 3D meniscus geometry and its inter-subject variation is essential to design well functioning anatomically shaped meniscus replacements. Therefore, the aim of this study was to quantify 3D meniscus geometry and to determine whether variation in medial meniscus geometry is size- or shape-driven. Also we performed a cluster analysis to identify distinct morphological groups of medial menisci and assessed whether meniscal geometry is gender-dependent. A statistical shape model was created, containing the meniscus geometries of 35 subjects (20 females, 15 males) that were obtained from MR images. A principal component analysis was performed to determine the most important modes of geometry variation and the characteristic changes per principal component were evaluated. Each meniscus from the original dataset was then reconstructed as a linear combination of principal components. This allowed the comparison of male and female menisci, and a cluster analysis to determine distinct morphological meniscus groups. Of the variation in medial meniscus geometry, 53.8% was found to be due to primarily size-related differences and 29.6% due to shape differences. Shape changes were most prominent in the cross-sectional plane, rather than in the transverse plane. Significant differences between male and female menisci were only found for principal component 1, which predominantly reflected size differences. The cluster analysis resulted in four clusters, yet these clusters represented two statistically different meniscal shapes, as differences between cluster 1, 2 and 4 were only present for principal component 1. This study illustrates that differences in meniscal geometry cannot be explained by scaling only, but that different meniscal shapes can be distinguished. Functional analysis, e.g. through finite element modeling, is required to assess whether these distinct shapes actually influence

  10. A computer-assisted 3D model for analyzing the aggregation of tumorigenic cells reveals specialized behaviors and unique cell types that facilitate aggregate coalescence.

    Directory of Open Access Journals (Sweden)

    Amanda Scherer

    Full Text Available We have developed a 4D computer-assisted reconstruction and motion analysis system, J3D-DIAS 4.1, and applied it to the reconstruction and motion analysis of tumorigenic cells in a 3D matrix. The system is unique in that it is fast, high-resolution, acquires optical sections using DIC microscopy (hence there is no associated photoxicity, and is capable of long-term 4D reconstruction. Specifically, a z-series at 5 μm increments can be acquired in less than a minute on tissue samples embedded in a 1.5 mm thick 3D Matrigel matrix. Reconstruction can be repeated at intervals as short as every minute and continued for 30 days or longer. Images are converted to mathematical representations from which quantitative parameters can be derived. Application of this system to cancer cells from established lines and fresh tumor tissue has revealed unique behaviors and cell types not present in non-tumorigenic lines. We report here that cells from tumorigenic lines and tumors undergo rapid coalescence in 3D, mediated by specific cell types that we have named "facilitators" and "probes." A third cell type, the "dervish", is capable of rapid movement through the gel and does not adhere to it. These cell types have never before been described. Our data suggest that tumorigenesis in vitro is a developmental process involving coalescence facilitated by specialized cells that culminates in large hollow spheres with complex architecture. The unique effects of select monoclonal antibodies on these processes demonstrate the usefulness of the model for analyzing the mechanisms of anti-cancer drugs.

  11. Trend Analysis for the Market and Application Development of 3D Printing

    OpenAIRE

    Chin-Ching Yeh

    2014-01-01

    In 2011, the Economist newspaper declared the advent of 3D printing, also known as Additive Manufacturing (AM), to herald the start of the Third Industrial Revolution. Chris Anderson, originator of the “long-tail theory”, not only authored Makers, a book on3D printing, but also co-founded 3D Robotics to realize his vision for the potential of 3D printing by applying his perspectives embedded in his book. Nevertheless, opposing viewpoints suggest that 3D printing may not be the game changer it...

  12. TORT-TD/ATTICA3D: a coupled neutron transport and thermal hydraulics code system for 3-D transient analysis of gas cooled high temperature reactors

    International Nuclear Information System (INIS)

    Comprehensive safety studies of high temperature gas cooled reactors (HTR) require full three dimensional coupled treatments of both neutron kinetics and thermal-hydraulics. In a common effort, GRS and IKE developed the coupled code system TORT-TD/ATTICA3D for pebble bed type HTR that connects the 3-D transient discrete-ordinates transport code TORT-TD with the 3-D porous medium thermal-hydraulics code ATTICA3D. In this paper, the physical models and calculation capabilities of TORT-TD and ATTICA3D are presented, focusing on model improvements in ATTICA3D and extensions made in TORT-TD related to HTR application. For first applications, the OECD/NEA/NSC PBMR-400 benchmark has been chosen. Results obtained with TORT-TD/ATTICA3D will be shown for transient exercises, e.g. control rod withdrawal and a control rod ejection. Results are compared to other benchmark participants' solutions with special focus on fuel temperature modelling features of ATTICA3D. The provided “grey-curtain” nuclear cross section libraries have been used. First results on 3-D effects during a control rod withdrawal transient will be presented. (author)

  13. Computational hologram synthesis and representation on spatial light modulators for real-time 3D holographic imaging

    International Nuclear Information System (INIS)

    In dynamic computer-generated holography that utilizes spatial light modulators, both hologram synthesis and hologram representation are essential in terms of fast computation and high reconstruction quality. For hologram synthesis, i.e. the computation step, Fresnel transform based or point-source based raytracing methods can be applied. In the encoding step, the complex wave-field has to be optimally represented by the SLM with its given modulation capability. For proper hologram reconstruction that implies a simultaneous and independent amplitude and phase modulation of the input wave-field by the SLM. In this paper, we discuss full complex hologram representation methods on SLMs by considering inherent SLM parameter such as modulation type and bit depth on their reconstruction performance such as diffraction efficiency and SNR. We review the three implementation schemes of Burckhardt amplitude-only representation, phase-only macro-pixel representation, and two-phase interference representation. Besides the optical performance we address their hardware complexity and required computational load. Finally, we experimentally demonstrate holographic reconstructions of different representation schemes as obtained by functional prototypes utilizing SeeReal's viewing-window holographic display technology. The proposed hardware implementations enable a fast encoding of complex-valued hologram data and thus will pave the way for commercial real-time holographic 3D imaging in the near future.

  14. 3D-QSAR studies on glycogen phosphorylase inhibitors by flexible comparative molecular field analysis

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    Canceling grids accommodating probes in comparative molecular field analysis (CoMFA), the idea of flexibleness is introduced into the CoMFA, and in combination with swarm intelligent algorithm which attempts to optimize distributions of diverse probes around drug molecules, a new 3D-QSAR method is proposed in this context as flexible comparative molecular field analysis (FCoMFA). In preliminary at-tempts to performing QSAR studies on 47 glycogen phosphorylase inhibitors, FCoMFA is employed and confirmed to be potent to exploring ligand-receptor interaction manners at active positions and thus to generating stable and predictable models. Simultaneously by an intuitive graphics regarding probe distribution patterns, impacts of different substituted groups on activities is also given an insight into.

  15. 3D-QSAR studies on glycogen phosphorylase inhibitors by flexible comparative molecular field analysis

    Institute of Scientific and Technical Information of China (English)

    ZHOU Peng; LI ZhiLiang

    2007-01-01

    Canceling grids accommodating probes in comparative molecular field analysis (CoMFA), the idea of flexibleness is introduced into the CoMFA, and in combination with swarm intelligent algorithm which attempts to optimize distributions of diverse probes around drug molecules, a new 3D-QSAR method is proposed in this context as flexible comparative molecular field analysis (FCoMFA). In preliminary attempts to performing QSAR studies on 47 glycogen phosphorylase inhibitors, FCoMFA is employed and confirmed to be potent to exploring ligand-receptor interaction manners at active positions and thus to generating stable and predictable models. Simultaneously by an intuitive graphics regarding probe distribution patterns, impacts of different substituted groups on activities is also given an insight into.

  16. Shakedown Analysis of 3-D Structures Using the Boundary Element Method Based on the Static Theorem

    Institute of Scientific and Technical Information of China (English)

    张晓峰; 刘应华; 岑章志

    2003-01-01

    The static shakedown theorem was reformulated for the boundary element method (BEM) rather than the finite element method with Melan's theorem, then used to develop a numerical solution procedure for shakedown analysis. The self-equilibrium stress field was constructed by a linear combination of several basis self-equilibrium stress fields with undetermined parameters. These basis self-equilibrium stress fields were expressed as elastic responses of the body to imposed permanent strains obtained using a 3-D BEM elastic-plastic incremental analysis. The lower bound for the shakedown load was obtained from a series of nonlinear mathematical programming problems solved using the Complex method. Numerical examples verified the precision of the present method.

  17. ANALYSIS OF SLAB EDGING BY A 3-D RIGID VISCO-PLASTIC FINITE ELEMENT METHOD

    Institute of Scientific and Technical Information of China (English)

    2002-01-01

    3-D rigid visco-plastic finite element method (FEM) is used in the analysis of metal forming processes, including strip and plate rolling, shape rolling, slab edging, special strip rolling. The shifted incomplete Cholesky decomposition of the stiffness matrix with the solution of the equations for velocity increment by the conjugate gradient method is combined. This technique, termed the shifted ICCG method, is then employed to solve the slab edging problem. The performance of this algorithm in terms of the number of iterations, friction variation, shifted parameter ( and the results of simulation for processing parameters are analysed. Numerical tests and application of this technique verify the efficiency and stability of the shifted ICCG method in the analysis of slab edging.

  18. Nonlinear coupling analysis of coal seam floor during mining based on FLAC3D

    Institute of Scientific and Technical Information of China (English)

    YAO Duo-xi; XU Ji-ying; LU Hai-feng

    2011-01-01

    Based on the hydro-geological conditions of 1028 mining face in Suntuan Coal Mine, mining seepage strain mechanism of seam floor was simulated by a nonlinear coupling method, which applied fluid-solid coupling analysis module of FLAC3D. The results indicate that the permeability coefficient of adjoining rock changes a lot due to mining. The maximum value reaches 1 379.9 times to the original value, where it is at immediate roof of the mined-out area. According to the analysis on the seepage field, mining does not destroy water resistance of the floor aquiclude. The mining fissure does not conduct lime-stone aquifer, and it is less likely to form damage. The plastic zone does not exactly correspond to the seepage area, and the scope of the altered seepage area is much larger than the plastic zone.

  19. 3D-QSAR Investigation of Synthetic Antioxidant Chromone Derivatives by Molecular Field Analysis

    Directory of Open Access Journals (Sweden)

    Jiraporn Ungwitayatorn

    2008-02-01

    Full Text Available A series of 7-hydroxy, 8-hydroxy and 7,8-dihydroxy synthetic chromone derivatives was evaluated for their DPPH free radical scavenging activities. A training set of 30 synthetic chromone derivatives was subject to three-dimensional quantitative structure-activity relationship (3D-QSAR studies using molecular field analysis (MFA. The substitutional requirements for favorable antioxidant activity were investigated and a predictive model that could be used for the design of novel antioxidants was derived. Regression analysis was carried out using genetic partial least squares (G/PLS method. A highly predictive and statistically significant model was generated. The predictive ability of the developed model was assessed using a test set of 5 compounds (r2pred = 0.924. The analyzed MFA model demonstrated a good fit, having r2 value of 0.868 and crossvalidated coefficient r2cv value of 0.771.

  20. Trend Analysis for the Market and Application Development of 3D Printing

    Directory of Open Access Journals (Sweden)

    Chin-Ching Yeh

    2014-02-01

    Full Text Available In 2011, the Economist newspaper declared the advent of 3D printing, also known as Additive Manufacturing (AM, to herald the start of the Third Industrial Revolution. Chris Anderson, originator of the “long-tail theory”, not only authored Makers, a book on3D printing, but also co-founded 3D Robotics to realize his vision for the potential of 3D printing by applying his perspectives embedded in his book. Nevertheless, opposing viewpoints suggest that 3D printing may not be the game changer its proponents claim. The article explores the technical classification and market growth potential of 3D printing, and analyzes the main markets and countries as well as the application scope of 3D printing.