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Sample records for 03-02-1999 amplicor roche

  1. Comparison of the Becton Dickinson strand displacement amplification and Cobas Amplicor Roche PCR for the detection of Chlamydia trachomatis: pooling versus individual tests

    DEFF Research Database (Denmark)

    Bang, D; Angelsø, Lene; Schirakow, Bente

    2003-01-01

    The objective of the study was to examine the influence of pooling Chlamydia trachomatis specimens. We compared Becton Dickinson ProbeTec strand displacement amplification (SDA) with Cobas Amplicor Roche (PCR). With PCR as the standard, SDA performed equally well in single-sample testing....... For pooled PCR samples (compared to individual PCR), we found a sensitivity of 100% and a specificity of 98.9%. For pooled SDA tests (compared to individual SDA), we found a sensitivity of 86.5% and a specificity of 98.9%. Our conclusion is that 2-sucrose phosphate buffer (2-SP) can be used for individual...

  2. Evaluation of the NucliSens EasyQ v2.0 assay in comparison with the Roche Amplicor v1.5 and the Roche CAP/CTM HIV-1 Test v2.0 in quantification of C-clade HIV-1 in plasma.

    Science.gov (United States)

    Muenchhoff, Maximilian; Madurai, Savathee; Hempenstall, Allison Jo; Adland, Emily; Carlqvist, Anna; Moonsamy, Angeline; Jaggernath, Manjeetha; Mlotshwa, Busisiwe; Siboto, Emma; Ndung'u, Thumbi; Goulder, Philip Jeremy Renshaw

    2014-01-01

    Human immunodeficiency virus type 1 (HIV-1) genetic diversity poses a challenge to reliable viral load monitoring. Discrepancies between different testing platforms have been observed, especially for non-clade-B virus. Therefore we compare, in antiretroviral therapy (ART)-naïve South African subjects predominantly infected with HIV-1 clade-C, three commercially available assays: the COBAS AmpliPrep/COBAS TaqMan HIV-1 Test version 2.0 by Roche (CAP/CTM v2.0), the BioMérieux NucliSens Version 2.0 Easy Q/Easy Mag (NucliSens v2.0) and the Roche COBAS Amplicor HIV-1 Monitor Test Version 1.5 (Amplicor v1.5). Strong linear correlation was observed and Bland-Altman analyses showed overall good agreement between the assays with mean viral load differences of 0.078 log cp/ml (NucliSens v2.0 - Amplicor v1.5), 0.260 log cp/ml (CAP/CTM v2.0 - Amplicor v1.5) and 0.164 log cp/ml (CAP/CTM v2.0 - NucliSens v2.0), indicating lower mean viral load results for the Amplicor v1.5 and higher mean readings for the CAP/CTM v2.0. Consistent with observations following previous comparisons of CAP/CTM v2.0 versus Amplicor v1.5, the CAP/CTM v2.0 assay detected low-level viremia (median 65 cp/ml) in more than one-third of those in whom viremia had been undetectable (<20 cp/ml) in assays using the NucliSens platform. These levels of viremia are of uncertain clinical significance but may be of importance in early detection of ART resistance in those on treatment. Overall the three assays showed good comparability of results but with consistent, albeit relatively small, discrepancies for HIV-1 clade-C samples, especially in the low-viremic range that should be taken into account when interpreting viral load data.

  3. Evaluation of the NucliSens EasyQ v2.0 assay in comparison with the Roche Amplicor v1.5 and the Roche CAP/CTM HIV-1 Test v2.0 in quantification of C-clade HIV-1 in plasma.

    Directory of Open Access Journals (Sweden)

    Maximilian Muenchhoff

    Full Text Available Human immunodeficiency virus type 1 (HIV-1 genetic diversity poses a challenge to reliable viral load monitoring. Discrepancies between different testing platforms have been observed, especially for non-clade-B virus. Therefore we compare, in antiretroviral therapy (ART-naïve South African subjects predominantly infected with HIV-1 clade-C, three commercially available assays: the COBAS AmpliPrep/COBAS TaqMan HIV-1 Test version 2.0 by Roche (CAP/CTM v2.0, the BioMérieux NucliSens Version 2.0 Easy Q/Easy Mag (NucliSens v2.0 and the Roche COBAS Amplicor HIV-1 Monitor Test Version 1.5 (Amplicor v1.5. Strong linear correlation was observed and Bland-Altman analyses showed overall good agreement between the assays with mean viral load differences of 0.078 log cp/ml (NucliSens v2.0 - Amplicor v1.5, 0.260 log cp/ml (CAP/CTM v2.0 - Amplicor v1.5 and 0.164 log cp/ml (CAP/CTM v2.0 - NucliSens v2.0, indicating lower mean viral load results for the Amplicor v1.5 and higher mean readings for the CAP/CTM v2.0. Consistent with observations following previous comparisons of CAP/CTM v2.0 versus Amplicor v1.5, the CAP/CTM v2.0 assay detected low-level viremia (median 65 cp/ml in more than one-third of those in whom viremia had been undetectable (<20 cp/ml in assays using the NucliSens platform. These levels of viremia are of uncertain clinical significance but may be of importance in early detection of ART resistance in those on treatment. Overall the three assays showed good comparability of results but with consistent, albeit relatively small, discrepancies for HIV-1 clade-C samples, especially in the low-viremic range that should be taken into account when interpreting viral load data.

  4. Pooling Ocular Swab Specimens from Tanzania for testing by Roche Amplicor and Aptima Combo 2 Assays for the detection of Chlamydia trachomatis: Accuracy and Cost Savings

    Science.gov (United States)

    Dize, Laura; West, Sheila; Quinn, Thomas C.; Gaydos, Charlotte A.

    2014-01-01

    Ocular swabs collected in Tanzania were evaluated by Amplicor CT and Aptima Combo2 assays for the detection of Chlamydia trachomatis (CT) to determine if pooling could be used to reduce the cost of detection. Pooling would be an accurate method and so far resulted in a cost-savings of 62.2%. PMID:24079951

  5. Multicenter comparison of Roche COBAS AMPLICOR MONITOR version 1.5, Organon Teknika NucliSens QT with Extractor, and Bayer Quantiplex version 3.0 for quantification of human immunodeficiency virus type 1 RNA in plasma.

    Science.gov (United States)

    Murphy, D G; Côté, L; Fauvel, M; René, P; Vincelette, J

    2000-11-01

    The performance and characteristics of Roche COBAS AMPLICOR HIV-1 MONITOR version 1.5 (CA MONITOR 1.5) UltraSensitive (usCA MONITOR 1. 5) and Standard (stCA MONITOR 1.5) procedures, Organon Teknika NucliSens HIV-1 RNA QT with Extractor (NucliSens), and Bayer Quantiplex HIV RNA version 3.0 (bDNA 3.0) were compared in a multicenter trial. Samples used in this study included 460 plasma specimens from human immunodeficiency virus (HIV) type 1 (HIV-1)-infected persons, 100 plasma specimens from HIV antibody (anti-HIV)-negative persons, and culture supernatants of HIV-1 subtype A to E isolates diluted in anti-HIV-negative plasma. Overall, bDNA 3.0 showed the least variation in RNA measures upon repeat testing. For the Roche assays, usCA MONITOR 1.5 displayed less variation in RNA measures than stCA MONITOR 1.5. NucliSens, at an input volume of 2 ml, showed the best sensitivity. Deming regression analysis indicated that the results of all three assays were significantly correlated (P < 0.0001). However, the mean difference in values between CA MONITOR 1.5 and bDNA 3.0 (0.274 log(10) RNA copies/ml; 95% confidence interval, 0.192 to 0.356) was significantly different from 0, indicating that CA MONITOR 1.5 values were regularly higher than bDNA 3.0 values. Upon testing of 100 anti-HIV-negative plasma specimens, usCA MONITOR 1.5 and NucliSens displayed 100% specificity, while bDNA 3.0 showed 98% specificity. NucliSens quantified 2 of 10 non-subtype B viral isolates at 1 log(10) lower than both CA MONITOR 1.5 and bDNA 3.0. For NucliSens, testing of specimens with greater than 1,000 RNA copies/ml at input volumes of 0.1, 0.2, and 2.0 ml did not affect the quality of results. Additional factors differing between assays included specimen throughput and volume requirements, limit of detection, ease of execution, instrument work space, and costs of disposal. These characteristics, along with assay performance, should be considered when one is selecting a viral load assay.

  6. Viral load: Roche applies for marketing approval for ultrasensitive test.

    Science.gov (United States)

    1998-08-07

    Roche Molecular Systems has applied for FDA permission to market a more sensitive viral load test. The Amplicor HIV-1 Monitor UltraSensitive Method tests viral load as low as 50 copies; current tests are only accurate to 400 copies. There is a widespread consensus among physicians that testing below 400 copies would be a valuable treatment tool.

  7. Comparison of the COBAS AMPLICOR MTB and BDProbeTec ET assays for detection of Mycobacterium tuberculosis in respiratory specimens.

    NARCIS (Netherlands)

    W.H.F. Goessens (Wil); P. de Man (Peter); J.G. Koeleman; A. Luijendijk (Ad); R. te Witt (René); H.P. Endtz (Hubert); A.F. van Belkum (Alex)

    2005-01-01

    textabstractThe performances of the BDProbeTec ET (Becton Dickinson) and COBAS AMPLICOR MTB (Roche) were retrospectively evaluated for detecting Mycobacterium tuberculosis complex in various respiratory specimens. The BACTEC and MGIT liquid culture system (Becton Dickinson) was used as a reference m

  8. Evaluation of AMPLICOR Neisseria gonorrhoeae PCR using cppB nested PCR and 16S rRNA PCR.

    Science.gov (United States)

    Farrell, D J

    1999-02-01

    Certain strains of Neisseria subflava and Neisseria cinerea are known to produce false-positive results with the AMPLICOR Neisseria gonorrhoeae PCR (Roche Diagnostic Systems, Branchburg, N.J.). The analytical sensitivity and analytical specificity of three PCR tests were assessed with 3 geographically diverse N. gonorrhoeae strains and 30 non-N. gonorrhoeae Neisseria spp. The sensitivities of the in-house nested cppB gene and the 16S rRNA PCR methods were greater than that of the AMPLICOR N. gonorrhoeae PCR with purified DNA from all 3 N. gonorrhoeae strains. Six of 14 clinical strains of N. subflava (1 from a vaginal swab, 5 from respiratory sites) produced false-positive AMPLICOR N. gonorrhoeae PCR results and were negative by the two other PCR methods. When applied to 207 clinical specimens selected from a population with a high prevalence ( approximately 9%) of infection, the results for 15 of 96 (15.6%) AMPLICOR-positive specimens and 14 of 17 (82.3%) AMPLICOR-equivocal specimens were not confirmed by the more sensitive nested cppB PCR method. Only 2 of 94 (2.1%) of AMPLICOR N. gonorrhoeae PCR-negative specimens from the same population tested positive by the nested cppB method. These results suggest that for this population the AMPLICOR N. gonorrhoeae PCR test is suitable as a screening test only and all positive results should be confirmed by a PCR method that is more specific and at least as sensitive. This study also illustrates that caution should be used when introducing commercially available nucleic acid amplification-based diagnostic tests into the regimens of tests used for populations not previously tested with these products.

  9. Reproducibility of AMPLICOR enterovirus PCR test results.

    OpenAIRE

    1997-01-01

    The reproducibility of AMPLICOR enterovirus PCR test results was determined with clinical samples of cerebrospinal fluid, serum, urine, and throat and rectal swabs. Among 608 samples from which duplicate aliquots were run simultaneously, only seven pairs gave discordant results. Among 104 samples from which duplicate aliquots were run in separate assays, no discordance was seen. Overall, the reproducibility of test kit results was 99% (705 of 712).

  10. Ranolazine Roche Bioscience.

    Science.gov (United States)

    Jones, R

    1998-12-01

    Ranolazine is a metabolic modulator developed by Syntex (Roche) and is in phase III clinical trials as an anti-anginal agent and for the treatment of peripheral arterial disease, particularly intermittent claudication. It allows maintenance of energy output by muscle cells under hypoxic conditions. Ranolazine may be especially useful in angina patients in whom other therapies are ineffective. The licensee, CV Therapeutics (CVT), began a pivotal placebo-controlled, phase III clinical trial of ranolazine in October 1997 enrolling 150 angina patients [265551]. CVT plans to begin a second phase III trial in 350 to 400 angina patients receiving other anti-anginal medications during 1998 [279177]. Clinical studies suggest that ranolazine lowers the heart's demand for oxygen by increasing its ability to use carbohydrate, rather than fat, as a fuel. This is thought to be due to activation of pyruvate dehydrogenase and modulation of the activities of L-type calcium channels. This is achieved without reducing heart rate or blood pressure, or impairing pumping ability [253375,247228]. Ranolazine has been tested in more than 1300 US and European patients in phase I and phase II clinical trials, and is now being evaluated in a placebo-controlled, double-blind multicenter study to determine its effectiveness in treating stable angina. Phase II trials, in over 1200 patients with ischemic heart disease, were completed by Syntex. They demonstrated increased exercise times to onset of angina or electrocardiographic change associated with insufficient blood flow to the heart with three times daily dosing of ranolazine [224364]. Roche Bioscience claims that in the US and Western Europe approximately 1.4 million angina patients are not adequately treated with existing therapies and some 5 million patients suffer from intermittent claudication [166817]. In August 1998, CV Therapeutics signed an agreement with Catalytica Pharmaceuticals, which will manufacture specified quantities of

  11. Homage to Jean Roche

    CERN Multimedia

    2010-01-01

    It was with deep sadness that we learnt that Jean Roche had died. Jean was one of those quietly efficient and conscientious pillars of our community who beaver away unobtrusively for decades and make such a contribution to building CERN. An expert in thermal engineering, he left his mark on many buildings on the Meyrin and Prévessin sites. At the time of the LEP project at the beginning of the 1980s he was in charge of defining the principles of the ventilation systems for the new accelerator. Through his design studies and the calls for tenders that he launched, he developed these high-performance state-of-the-art installations which not only made LEP’s successes possible but also served as benchmarks for the fundamental principles underpinning the design of the LHC ventilation system. Jean always liked to surround himself with young people and during the years of his stewardship the design office was a splendid training ground. Despite his responsibilities, Jean was always keen t...

  12. Pegasys (Hoffmann-La Roche).

    Science.gov (United States)

    Barnard, D L

    2001-11-01

    Hoffmann-La Roche has developed a PEGylated interferon alpha-2a, Pegasys, for the potential treatment of chronic hepatitis C and hepatitis B virus infection. It was first approved in Switzerland in August 2001 [418260] and was expected to be launched in September/October 2001 [419333]. In May 2000, Roche submitted a BLA to the US FDA, for approval to market Pegasys for the treatment of chronic HCV infection in non-cirrhotic and cirrhotic patients with compensated liver disease [329872], [348368], [367781]. Approval was still pending in December 2000 [387363], [392481]. Roche expects the US launch to take place in the second half of 2001 [400857]. In April 2001, Roche received a complete response letter from the FDA for Pegasys and was working with the FDA to address the questions raised in the letter [407595], [418310]. In August 2001, Roche expected approval for HCV in the US in 2002 and for HBV in 2004 [419333]. At this time, Roche planned to file an sNDA for combination with ribavirin [421285]. By March 2001, EU and Canadian filings had been made [401793]. Roche also planned to launch the product for chronic HBV infection and various malignancies in 2004 and 2005, respectively [400857]. Pegasys was filed for registration in Brazil in the first part of 2000 [418310]. As of December 1999, the drug was in phase II for HCV infection in Japan. It is being developed by Nippon Roche, which intended to extrapolate foreign phase III data for use in an NDA application in Japan [351804]. As a result of a meeting of Japan's PMSB in March 2001, Pegasys may be given priority in the review of its NDA, if submitted [403782]. In August 2001, Schering-Plough entered into a licensing agreement with F Hoffman-La Roche Ltd and Hoffmann-La Roche Inc that settles all patent disputes regarding the two companies' PEGinterferon products. Under the terms of the agreement, Schering-Plough and Roche will cross license to each other all patents applicable to Peg-Intron and Pegasys. The

  13. A Java Interface for Roche Lobe Calculations

    Science.gov (United States)

    Leahy, D. A.; Leahy, J. C.

    2015-09-01

    A JAVA interface for calculating various properties of the Roche lobe has been created. The geometry of the Roche lobe is important for studying interacting binary stars, particularly those with compact objects which have a companion which fills the Roche lobe. There is no known analytic solution to the Roche lobe problem. Here the geometry of the Roche lobe is calculated numerically to high accuracy and made available to the user for arbitrary input mass ratio, q.

  14. Ranolazine (Roche Bioscience).

    Science.gov (United States)

    Jones, R

    1999-12-01

    Ranolazine is a metabolic modulator that is being developed by CV Therapeutics (CVT), under license from Roche (formerly Syntex), as a potential treatment for angina. In August 1999, the first of two pivotal phase III clinical trials in patients with stable angina was completed. In August 1999, CVT announced initial results from this trial, designated the MARISA trial, of ranolazine in patients with stable angina. At each of the three doses studied, ranolazine significantly increased patients' treadmill exercise duration compared to placebo, the primary endpoint for this trial. MARISA (monotherapy assessment of ranolazine in stable angina) was a randomized, double-blind, placebo-controlled trial of a sustained release formulation of ranolazine used in 175 patients who were not receiving other anti-anginal drugs. Compared to placebo, ranolazine taken bid at doses of 500, 1000 or 1500 mg significantly increased exercise duration at trough plasma concentrations, which occur at about 12 h after the previous dose. In addition, two key secondary endpoints, exercise time to onset of angina and exercise time to the electrocardiographic appearance of ischemia were also significantly increased by ranolazine compared to placebo at all three doses. The company plans on presenting additional data at a major medical conference, including safety and tolerability data, which are still under analysis. In July 1999 CVT initiated its second phase III trial. The CARISA trial (combination assessment of ranolazine in stable angina) is a randomized, double-blind, placebo-controlled trial of ranolazine used in combination with other anti-anginal drugs, in approximately 450 patients. The primary endpoint for this trial, duration of exercise on a treadmill, is identical to that used in phase II clinical trials. The CARISA trial, along with the pivotal phase III MARISA trial which completed treatment in June 1999, is expected to form the basis of the company's NDA submission to the FDA. In

  15. Detection of PCR inhibitors in cervical specimens by using the AMPLICOR Chlamydia trachomatis assay

    NARCIS (Netherlands)

    R.P.A.J. Verkooyen (Roel); A. Luijendijk (Ad); W.M. Huisman; W.H.F. Goessens (Wil); J.A.J.W. Kluytmans (Jan); J.H. van Rijsoort-Vos; H.A. Verbrugh (Henri)

    1996-01-01

    textabstractTo determine that susceptibility of AMPLICOR Chlamydia trachomatis PCR to inhibitory factors possibly present in cervical specimens, we obtained cervical specimens from 200 gynecology patients attending our outpatient clinic. The prevalence of C. trachomatis

  16. Performance of Roche CAP/CTM HIV-1 qualitative test version 2.0 using dried blood spots for early infant diagnosis.

    Science.gov (United States)

    Gueye, Sokhna Bousso; Diop-Ndiaye, Halimatou; Diallo, Mamadou Malick; Ly, Omar; Sow-Ndoye, Aissatou; Diagne-Gueye, Ndèye Diabou; Kébé-Fall, Khady; Diop, Fatou; Gaye-Diallo, Aïssatou; Belec, Laurent; Mboup, Souleymane; Touré-Kane, Coumba

    2016-03-01

    In the context of early infant diagnosis (EID) decentralization in sub-Saharan Africa, dried blood spot (DBS) is now widely used for HIV proviral DNA detection in resource-limited settings. A new version of CAP/CTM (version 2) has been introduced, recently by Roche Diagnosis as a new real-time PCR assay to replace previous technologies on qualitative detection of HIV-1 DNA using whole blood and DBS samples. The objective of this study was to evaluate CAP/CTM version 2 compared to CAP/CTM version 1 and Amplicor on DBS. A total of 261 DBS were collected from children aged 4 weeks to 17 months born from HIV-seropositive mothers and tested by the three techniques. CAP/CTM version 2 showed 100% of agreement with Amplicor including 74 positive results and 187 negative results. CAP/CTM version 2 versus CAP/CTM version 1 as well as CAP/CTM version 1 versus Amplicor showed two discordant results giving a sensitivity of 98.6%, specificity of 99.5%, positive predictive value of 98.6% and negative predictive value of 99.5%. The concordance was 99.12% (95% of confidence interval) giving a Kappa coefficient of 0.97 (pHIV-1 EID.

  17. Evaluation of the AMPLICOR cytomegalovirus test with specimens from human immunodeficiency virus-infected subjects.

    Science.gov (United States)

    Boivin, G; Handfield, J; Toma, E; Murray, G; Lalonde, R; Tevere, V J; Sun, R; Bergeron, M G

    1998-09-01

    The AMPLICOR cytomegalovirus (CMV) test, a new qualitative assay for the detection of CMV DNA in plasma, was compared to conventional methods and quantitative PCR (Q-PCR) assays by using leukocytes and plasma from 179 blood samples from subjects with AIDS. For the diagnosis of CMV disease, cell-based assays such as a Q-PCR with polymorphonuclear leukocytes (Q-PCR-PMNL) and a pp65 antigenemia assay had the highest sensitivities but suffered from a lack of specificity. The best agreement between the results of the Q-PCR-PMNL assay and those of the AMPLICOR test was found when a threshold diagnostic value of 690 copies per 10(5) cells was selected for the Q-PCR-PMNL assay. In that context, the AMPLICOR CMV test had a sensitivity of 96.4% and a specificity of 95.3% when results were compared to results of the cell-based PCR assay. This threshold was close to the one described as associated with the best sensitivity and specificity for the diagnosis of CMV disease in a recently published study (4). Blood samples that tested positive by the Q-PCR-PMNL assay but negative by the AMPLICOR CMV test were associated with viral loads (mean, 785 copies, median, 96 copies per 10(5) leukocytes) lower than the viral loads of blood samples that tested positive by both assays (mean, 21,452 copies; median, 9,784 copies per 10(5) leukocytes) (P = 0.003). The AMPLICOR CMV test gave positive results at least 48 days before the development of symptomatic CMV disease in a longitudinal analysis of a limited subset of patients (n = 6) from whom sequential specimens were available for testing. In conclusion, the AMPLICOR CMV test is a very convenient assay combining rapidity, simplicity, and the possibility of batch testing. A positive result by this test seems particularly important since this implies, in most instances, the presence or the imminence of CMV disease, although a negative test result does not rule out disease.

  18. Roch Carrier, Popular Language, and Joual.

    Science.gov (United States)

    Walkley, Max

    1997-01-01

    Discusses the language problems in Roch Carrier's French Canadian short stories, as well as his concise, nostalgic writing style. The article gives examples of vocabulary in his characters' dialogue; reviews the evolvement of French in Quebec and the question of "joual," in particular; and focuses on expressions posing difficulty for…

  19. Comparison of the COBAS/Ampliprep Taqman and Amplicor HIV-1 monitor tests in Lagos, Nigeria

    Directory of Open Access Journals (Sweden)

    Oluemi S. Amoo

    2013-03-01

    Full Text Available Background: The use of real-time Polymerase chain reaction (PCR technology options is increasing in resource-limited settings because they are faster, improve assay sensitivity,have higher throughput, larger dynamic ranges and reduced rates of contamination. In 2010, UNAIDS ranked Nigeria as the second highest population of people living with HIV and AIDS (2.98 million people in the world.Objective: The objective of this study was to compare the analytical performances of the Amplicor HIV-1 Monitor (version 1.5 and the COBAS Ampliprep/Taqman (version 2.0 usedin monitoring HIV disease progression in HIV-infected individuals.Method: In a cross-sectional study, HIV-1 RNA values obtained with the Amplicor HIV-1 monitor version 1.5 were compared with those of the COBAS/Ampliprep TaqMan HIV-1version 2.0 in a routine clinical setting. Between May and November 2011, 176 plasma samples collected were analysed in parallel using both techniques. Data analysis was done using statgraphics Centurion XVI and Medcalc version 12.0.Result: The correlation coefficient for the two assays was 0.83 and the level of agreement using a Bland–Altman plot was 94.2%.Conclusion: These findings suggest that the results from the two methods were comparable, hence the COBAS/Ampliprep Taqman version 2.0 is recommended for high-volume laboratories.

  20. Linnugripp tõi ravimifirmale Roche magusa kasumi / Erik Aru

    Index Scriptorium Estoniae

    Aru, Erik

    2005-01-01

    Šveitsi ravimitootja Roche'i viiruseravimi Tamiflu müük on kasvanud. Roche kavatseb järgmiseks suveks suurendada toodangut võrreldes 2004. aastaga kaheksa korda, kuid seda ei peeta piisavaks. ÜRO ja WHO nõuavad, et firma loobuks patentidest või annaks koopiaravimite valmistajatele tootmise litsentsi. Tabel: F. Hoffmann-La Roche. Lisa: Linnugripi vaktsiini võib loota kuue kuu pärast

  1. Linnugripp tõi ravimifirmale Roche magusa kasumi / Erik Aru

    Index Scriptorium Estoniae

    Aru, Erik

    2005-01-01

    Šveitsi ravimitootja Roche'i viiruseravimi Tamiflu müük on kasvanud. Roche kavatseb järgmiseks suveks suurendada toodangut võrreldes 2004. aastaga kaheksa korda, kuid seda ei peeta piisavaks. ÜRO ja WHO nõuavad, et firma loobuks patentidest või annaks koopiaravimite valmistajatele tootmise litsentsi. Tabel: F. Hoffmann-La Roche. Lisa: Linnugripi vaktsiini võib loota kuue kuu pärast

  2. Diagnostic value of Cobas Amplicor MTB and Rotorgene Real Time PCR for tuberculous meningitis: A six-year retrospective study

    Directory of Open Access Journals (Sweden)

    Gülnur Tarhan

    2015-12-01

    Full Text Available Objective: Tuberculous meningitis (TBM is the most severe and lethal form of tuberculosis (TB.Bacteriologic confirmation of TBM is difficult and slow. Therefore, most patients receive ntituberculosis treatment based only on clinical and cerebrospinal fluid (CSF characteristics. Rapid diagnosis of TBM is important to decrease morbidity and mortality. The aim of the study was to demonstrate that COBAS Amplicor MTB and Rotorgene Real Time (RT PCR is a rapid method of diagnosing TBM before and after initiating anti-tuberculosis treatment. Methods: A retrospective study was conducted between December 2002 and January 2009 in 468 patients with suspected TBM. Clinical specimens were collected from different hospitals in Ankara. All specimens were evaluated by smear microscopy and culture methods with Lowenstein-Jensen (LJ and MGIT culture system. Results: Using culture results as a gold standard, the sensitivity, specificity, positive predictive values (PPV, and negative predictive values (NPV were 71.0%, 98.8%, 97.8% and 75.0%, respectively, for COBAS Amplicor MTB and 80%, 98.9%, 99.0% and 80.0%, respectively, for Rotorgene RT PCR. Statistical analysis showed no significant differences between the COBAS Amplicor MTB and Rotorgene RT PCR (p≥0.05. All isolates were susceptible to isoniazid, rifampin, streptomycin, and ethambutol with proportion method in LJ medium. All isolates were defined as LAM7-TUR by spoligotyping. Conclusion: Retrospective analysis of COBAS Amplicor MTB and Rotorgene RT PCR found that both tests are effective in rapidly diagnosing MTB using CSF. It was concluded that Rotorgene RT PCR test is more sensitive (81.0% than COBAS Amplicor MTB (71.0%. J Microbiol Infect Dis 2015;5(4: 156-161

  3. Ice cream and orbifold Riemann-Roch

    Science.gov (United States)

    Buckley, Anita; Reid, Miles; Zhou, Shengtian

    2013-06-01

    We give an orbifold Riemann-Roch formula in closed form for the Hilbert series of a quasismooth polarized n-fold (X,D), under the assumption that X is projectively Gorenstein with only isolated orbifold points. Our formula is a sum of parts each of which is integral and Gorenstein symmetric of the same canonical weight; the orbifold parts are called ice cream functions. This form of the Hilbert series is particularly useful for computer algebra, and we illustrate it on examples of {K3} surfaces and Calabi-Yau 3-folds. These results apply also with higher dimensional orbifold strata (see [1] and [2]), although the precise statements are considerably trickier. We expect to return to this in future publications.

  4. Reliability of Cobas Amplicor PCR test in detection of Mycobacterium tuberculosis in respiratory and nonorespiratory specimens

    Directory of Open Access Journals (Sweden)

    Lepšanović Zorica

    2009-01-01

    Full Text Available Background/Aim. Traditional methods for detection of mycobacteria, such as microscopic examination for the presence of acid-fast bacilli and isolation of the organism by culture, have either a low sensitivity and/or specificity, or take weeks before a definite result is available. Molecular methods, especially those based on nucleic acid amplification, are rapid diagnostic methods which combine high sensitivity and high specificity. The aim of this study was to determine the usefulness of the Cobas Amplicor Mycobacterium tuberculosis polymerase chain reaction (CAPCR assay in detecting the tuberculosis cause in respiratory and nonrespiratory specimens (compared to culture. Methods. Specimens were decontaminated by the N-acetyl-L-cystein- NaOH method. A 500 μL aliquot of the processed specimen were used for inoculation of Löwenstein-Jensen (L-J slants, a drop for acid-fast staining, and 100 μL for PCR. The Cobas Amplicor PCR was performed according to the manufacturer's instructions. Results. A total of 110 respiratory and 355 nonrespiratory specimens were investigated. After resolving discrepancies by reviewing medical history, overall sensitivity, specificity, and positive and negative predictive values for CA-PCR assay compared to culture, were 83%, 100%, 100%, and 96.8%, respectively. In comparison, they were 50%, 99.7%, 87.5%, and 98%, respectively, for the nonrespiratory specimens. The inhibition rate was 2.8% for respiratory, and 7.6% for nonrespiratory specimens. Conclusion. CA-PCR is a reliable assay that enables specialists to start treatment promptly on a positive test result. Lower value for specificity in a group of nonrespiratory specimens is a consequence of an extremely small number of mycobacteria in some of them.

  5. Roche volume filling and the dissolution of open star clusters

    CERN Document Server

    Ernst, A; Just, A; Noel, T

    2015-01-01

    From direct N-body simulations we find that the dynamical evolution of star clusters is strongly influenced by the Roche volume filling factor. We present a parameter study of the dissolution of open star clusters with different Roche volume filling factors and different particle numbers. We study both Roche volume underfilling and overfilling models and compare with the Roche volume filling case. We find that in the Roche volume overfilling limit of our simulations two-body relaxation is no longer the dominant dissolution mechanism but the changing cluster potential. We call this mechnism "mass-loss driven dissolution" in contrast to "two-body relaxation driven dissolution" which occurs in the Roche volume underfilling regime. We have measured scaling exponents of the dissolution time with the two-body relaxation time. In this experimental study we find a decreasing scaling exponent with increasing Roche volume filling factor. The evolution of the escaper number in the Roche volume overfilling limit can be d...

  6. Roche volume filling and the dissolution of open star clusters

    Science.gov (United States)

    Ernst, A.; Berczik, P.; Just, A.; Noel, T.

    2015-08-01

    From direct N-body simulations we find that the dynamical evolution of star clusters is strongly influenced by the Roche volume filling factor. We present a parameter study of the dissolution of open star clusters with different Roche volume filling factors and different particle numbers. We study both Roche volume underfilling and overfilling models and compare with the Roche volume filling case. We find that in the Roche volume overfilling limit of our simulations two-body relaxation is no longer the dominant dissolution mechanism but the changing cluster potential. We call this mechanism ``mass-loss driven dissolution'' in contrast to ``two-body relaxation driven dissolution'' which occurs in the Roche volume underfilling regime. We have measured scaling exponents of the dissolution time with the two-body relaxation time. In this experimental study we find a decreasing scaling exponent with increasing Roche volume filling factor. The evolution of the escaper number in the Roche volume overfilling limit can be described by a log-logistic differential equation. We report the finding of a resonance condition which may play a role for the evolution of star clusters and may be calibrated by the main periodic orbit in the large island of retrograde quasiperiodic orbits in the Poincaré surfaces of section. We also report on the existence of a stability curve which may be of relevance with respect to the structure of star clusters.

  7. An integral Riemann-Roch theorem for surface bundles

    DEFF Research Database (Denmark)

    Madsen, Ib Henning

    2010-01-01

    This paper is a response to a conjecture by T. Akita about an integral Riemann–Roch theorem for surface bundles.......This paper is a response to a conjecture by T. Akita about an integral Riemann–Roch theorem for surface bundles....

  8. A Riemann-Roch theorem for the noncommutative two torus

    Science.gov (United States)

    Khalkhali, Masoud; Moatadelro, Ali

    2014-12-01

    We prove the analogue of the Riemann-Roch formula for the noncommutative two torus Aθ = C(Tθ2)equipped with an arbitrary translation invariant complex structure and a Weyl factor represented by a positive element k ∈C∞(Tθ2). We consider a topologically trivial line bundle equipped with a general holomorphic structure and the corresponding twisted Dolbeault Laplacians. We define a spectral triple (Aθ , H , D) that encodes the twisted Dolbeault complex of Aθ and whose index gives the left hand side of the Riemann-Roch formula. Using Connes' pseudodifferential calculus and heat equation techniques, we explicitly compute the b2 terms of the asymptotic expansion of Tr(e-tD2) . We find that the curvature term on the right hand side of the Riemann-Roch formula coincides with the scalar curvature of the noncommutative torus recently defined and computed in Connes and Moscovici (2014) and independently computed in Fathizadeh and Khalkhali (2014).

  9. Binary Evolution: Roche Lobe Overflow and Blue Stragglers

    Science.gov (United States)

    Ivanova, Natalia

    One of the principal mechanisms that is responsible for the origin of blue stragglers is mass transfer that takes place while one of the binary companions overfills its Roche lobe. In this Chapter, we overview the theoretical understanding of mass transfer via Roche lobe overflow: classification, how both the donor and of the accretor respond to the mass transfer on different timescales (adiabatic response, equilibrium response, superadiabatic response, time-dependent response) for different types of their envelopes (convective and radiative). These responses, as well as the assumption on how liberal the process is, are discussed in terms of the stability of the ensuing mass transfer. The predictions of the theory of mass transfer via Roche lobe overflow are then briefly compared with the observed mass-transferring systems with both degenerate and non-degenerate donors. We conclude with the discussion which cases of mass transfer and which primordial binaries could be responsible for blue stragglers formation via Roche lobe overflow, as well as how this can be enhanced for blue stragglers formed in globular clusters

  10. Lefschetz and Hirzebruch-Riemann-Roch formulas via noncommutative motives

    CERN Document Server

    Cisinski, Denis-Charles

    2011-01-01

    V. Lunts has recently established Lefschetz fixed point theorems for Fourier-Mukai functors and dg algebras. In the same vein, D. Shklyarov introduced the noncommutative analogue of the Hirzebruch-Riemann-Roch theorem. In this note, making use of the theory of noncommutative motives, we show how these beautiful theorems can be understood as instantiations of more general results.

  11. Riemann-Roch Spaces and Linear Network Codes

    DEFF Research Database (Denmark)

    Hansen, Johan P.

    2015-01-01

    We construct linear network codes utilizing algebraic curves over finite fields and certain associated Riemann-Roch spaces and present methods to obtain their parameters. In particular we treat the Hermitian curve and the curves associated with the Suzuki and Ree groups all having the maximal...

  12. Comparison of COBAS AMPLICOR Neissefia gonorrhoeae PCR, including confirmation with N-gonorrhoeae-specific 16S rRNA PCR, with traditional culture

    NARCIS (Netherlands)

    Luijt, DS; Bos, PAJ; van Zwet, AA; Vader, PCV; Schirm, J

    A total of 3,023 clinical specimens were tested for Neisseria gonorrhoeae by using COBAS AMPLICOR (CA) PCR and confirmation of positives by N. gonorrhoeae-specific 16S rRNA PCR. The sensitivity of CA plus 16S rRNA PCR was 98.8%, compared to 68.2% for culture. Confirmation of CA positives increased

  13. Comparison of COBAS AMPLICOR Neisseria gonorrhoeae PCR, including confirmation with N. gonorrhoeae-specific 16S rRNA PCR, with traditional culture

    NARCIS (Netherlands)

    Luijt, D.S.; Bos, P.A.; van Zwet, A.A.; Voorst-Vader, P.C.; Schirm, J.

    2005-01-01

    : A total of 3,023 clinical specimens were tested for Neisseria gonorrhoeae by using COBAS AMPLICOR (CA) PCR and confirmation of positives by N. gonorrhoeae-specific 16S rRNA PCR. The sensitivity of CA plus 16S rRNA PCR was 98.8%, compared to 68.2% for culture. Confirmation of CA positives increased

  14. Comparison of COBAS AMPLICOR Neissefia gonorrhoeae PCR, including confirmation with N-gonorrhoeae-specific 16S rRNA PCR, with traditional culture

    NARCIS (Netherlands)

    Luijt, DS; Bos, PAJ; van Zwet, AA; Vader, PCV; Schirm, J

    2005-01-01

    A total of 3,023 clinical specimens were tested for Neisseria gonorrhoeae by using COBAS AMPLICOR (CA) PCR and confirmation of positives by N. gonorrhoeae-specific 16S rRNA PCR. The sensitivity of CA plus 16S rRNA PCR was 98.8%, compared to 68.2% for culture. Confirmation of CA positives increased t

  15. Comparison of COBAS AMPLICOR Neissefia gonorrhoeae PCR, including confirmation with N-gonorrhoeae-specific 16S rRNA PCR, with traditional culture

    NARCIS (Netherlands)

    Luijt, DS; Bos, PAJ; van Zwet, AA; Vader, PCV; Schirm, J

    2005-01-01

    A total of 3,023 clinical specimens were tested for Neisseria gonorrhoeae by using COBAS AMPLICOR (CA) PCR and confirmation of positives by N. gonorrhoeae-specific 16S rRNA PCR. The sensitivity of CA plus 16S rRNA PCR was 98.8%, compared to 68.2% for culture. Confirmation of CA positives increased t

  16. Comparison of COBAS AMPLICOR Neisseria gonorrhoeae PCR, including confirmation with N. gonorrhoeae-specific 16S rRNA PCR, with traditional culture

    NARCIS (Netherlands)

    Luijt, D.S.; Bos, P.A.; van Zwet, A.A.; Voorst-Vader, P.C.; Schirm, J.

    2005-01-01

    : A total of 3,023 clinical specimens were tested for Neisseria gonorrhoeae by using COBAS AMPLICOR (CA) PCR and confirmation of positives by N. gonorrhoeae-specific 16S rRNA PCR. The sensitivity of CA plus 16S rRNA PCR was 98.8%, compared to 68.2% for culture. Confirmation of CA positives increased

  17. ["Wetlands". Charles Bukowski and Charlotte Roche on hemorrhoids].

    Science.gov (United States)

    Bahmer, F A; Bahmer, J A

    2010-08-01

    More than 40 years ago Charles Bukowski described his experiences with coloscopy and the ensuing surgery on his hemorrhoids, both performed by a doctor pictured as sadistic. Bukowski not only depicts these procedures but also characterizes his compassionate inpatients as well as the nursing staff. In her bestseller published in 2008 Charlotte Roche's protagonist Helen needs surgical inpatient treatment because of hemorrhoidal bleeding. Her stay in the hospital, prolonged by a postoperative self-inflicted bleeding, provides the basis not only for strategies to bring her divorced parents together but also for thoughts on genitalia, manifold sexual practices, as well as on rules of hygiene. From a psychodynamic viewpoint the protagonists in both stories suffer from a depressive basic conflict, compensated in Bukowski's work by a dependent, self-destructive, philobatic form of coping and in Roche's alter ego Helen by an impulsive, sexualized behaviour.

  18. Submaximal Riemann-Roch expected curves and symplectic packing.

    Directory of Open Access Journals (Sweden)

    Wioletta Syzdek

    2007-06-01

    Full Text Available We study Riemann-Roch expected curves on $mathbb{P}^1 imes mathbb{P}^1$ in the context of the Nagata-Biran conjecture. This conjecture predicts that for sufficiently large number of points multiple points Seshadri constants of an ample line bundle on algebraic surface are maximal. Biran gives an effective lower bound $N_0$. We construct examples verifying to the effect that the assertions of the Nagata-Biran conjecture can not hold for small number of points. We discuss cases where our construction fails. We observe also that there exists a strong relation between Riemann-Roch expected curves on $mathbb{P}^1 imes mathbb{P}^1$ and the symplectic packing problem. Biran relates the packing problem to the existence of solutions of certain Diophantine equations. We construct such solutions for any ample line bundle on $mathbb{P}^1 imes mathbb{P}^1$ and a relatively smallnumber of points. The solutions geometrically correspond to Riemann-Roch expected curves. Finally we discuss in how far the Biran number $N_0$ is optimal in the case of mathbb{P}^1 imes mathbb{P}^1. In fact we conjecture that it can be replaced by a lower number and we provide evidence justifying this conjecture.

  19. Roche Accretion of stars close to massive black holes

    CERN Document Server

    Lixin,; Blandford, Roger D

    2011-01-01

    In this paper we consider Roche accretion in an Extreme Mass-Ratio Inspiral (EMRI) binary system formed by a star orbiting a massive black hole. The ultimate goal is to detect the mass and spin of the black hole and provide a test of general relativity in the strong-field regime from the resultant quasi-periodic signals. Before accretion starts, the stellar orbit is presumed to be circular and equatorial, and shrinks due to gravitational radiation. New fitting formulae are presented for the inspiral time and the radiation-reaction torque in the relativistic regime. If the inspiralling star fills its Roche lobe outside the Innermost Stable Circular Orbit (ISCO) of the hole, gas will flow through the inner Lagrange point (L1) to the hole. We give new relativistic interpolation formulae for the volume enclosed by the Roche lobe. If this mass-transfer happens on a time scale faster than the thermal time scale but slower than the dynamical time scale, the star will evolve adiabatically, and, in most cases, will re...

  20. Mécanique des sols et des roches

    CERN Document Server

    Vullier, Laurent; Zhao, Jian

    2016-01-01

    La mécanique des sols et la mécanique des roches sont des disciplines généralement traitées séparément dans la littérature. Pour la première fois, un traité réunit ces deux spécialités, en intégrant également les connaissances en lien avec les écoulements souterrains et les transferts thermiques. A la fois théorique et pratique, cet ouvrage propose tout d'abord une description détaillée de la nature et de la composition des sols et des roches, puis s'attache à la modélisation de problèmes aux conditions limites et présente les essais permettant de caractériser les sols et les roches, tant d'un point de vue mécanique qu'hydraulique et thermique. La problématique des sols non saturés et des écoulements multiphasiques est également abordée. Une attention particulière est portée aux lois de comportement mécanique et à la détermination de leurs paramètres par des essais in situ et en laboratoire, et l'ouvrage offre également une présentation détaillée des systèmes de classi...

  1. Comparison of real-time polymerase chain reaction with the COBAS Amplicor test for quantitation of hepatitis B virus DNA in serum samples

    Institute of Scientific and Technical Information of China (English)

    Ming Shi; Yong Zhang; Ying-Hua Zhu; Jing Zhang; Wei-Jia Xu

    2008-01-01

    AIM: To compare the clinical performance of a real-time PCR assay with the COBAS Amplicor Hepatitis B Virus (HBV) Monitor test for quantitation of HBV DNA in serum samples. METHODS: The reference sera of the Chinese National Institute for the Control of Pharmaceutical and Biological Products and the National Center for Clinical Laboratories of China, and 158 clinical serum samples were used in this study. The linearity, accuracy, reproducibility, assay time, and costs of the real-time PCR were evaluated and compared with those of the Cobas Amplicor test. RESULTS: The intra-assay and inter-assay variations of the real-time PCR ranged from 0.3% to 3.8% and 1.4% to 8.1%, respectively. The HBV DNA levels measured by the real-time PCR correlated very well with those obtained with the COBAS Amplicor test (r = 0.948). The real-time PCR HBV DNA kit was much cheaper and had a wider dynamic range. CONCLUSION: The real-time PCR assay is an excellent tool for monitoring of HBV DNA levels in patients with chronic hepatitis B.

  2. Riemann-Roch Spaces and Linear Network Codes

    DEFF Research Database (Denmark)

    Hansen, Johan P.

    2015-01-01

    We construct linear network codes utilizing algebraic curves over finite fields and certain associated Riemann-Roch spaces and present methods to obtain their parameters. In particular we treat the Hermitian curve and the curves associated with the Suzuki and Ree groups all having the maximal...... number of points for curves of their respective genera. Linear network coding transmits information in terms of a basis of a vector space and the information is received as a basis of a possibly altered vector space. Ralf Koetter and Frank R. Kschischang %\\cite{DBLP:journals/tit/KoetterK08} introduced...... in the above metric making them suitable for linear network coding....

  3. Riemann-Roch Spaces and Linear Network Codes

    DEFF Research Database (Denmark)

    Hansen, Johan P.

    We construct linear network codes utilizing algebraic curves over finite fields and certain associated Riemann-Roch spaces and present methods to obtain their parameters. In particular we treat the Hermitian curve and the curves associated with the Suzuki and Ree groups all having the maximal...... number of points for curves of their respective genera. Linear network coding transmits information in terms of a basis of a vector space and the information is received as a basis of a possibly altered vector space. Ralf Koetter and Frank R. Kschischang %\\cite{DBLP:journals/tit/KoetterK08} introduced...... in the above metric making them suitable for linear network coding....

  4. Comparison of two commercial assays for detection of human papillomavirus (HPV) in cervical scrape specimens: validation of the Roche AMPLICOR HPV test as a means to screen for HPV genotypes associated with a higher risk of cervical disorders.

    NARCIS (Netherlands)

    Ham, M.A. van; Bakkers, J.M.J.E.; Harbers, G.; Quint, W.G.V.; Massuger, L.F.A.G.; Melchers, W.J.G.

    2005-01-01

    Certain high-risk (HR) human papillomavirus (HPV) types are a necessary cause for the development of cervical disorders. Women with persistent HR HPV infections have an increased risk of developing high-grade cervical lesions, compared with those who have no or low-risk HPV infections. Therefore, im

  5. Hot-Jupiter Core Mass from Roche-lobe Overflow

    CERN Document Server

    Ginzburg, Sivan

    2016-01-01

    The orbits of many observed hot Jupiters are decaying rapidly due to tidal interaction, eventually reaching the Roche limit. We analytically study the ensuing coupled mass loss and orbital evolution during the Roche-lobe overflow and find two possible scenarios. Planets with light cores $M_c\\lesssim 6M_\\oplus$ (assuming a nominal tidal dissipation factor $Q\\sim 10^6$ for the host star) are transformed into Neptune-mass gas planets, orbiting at a separation (relative to the stellar radius) $a/R_\\star\\approx 3.5$. Planets with heavier cores $M_c\\gtrsim 6M_\\oplus$ plunge rapidly until they are destroyed at the stellar surface. Remnant gas-Neptunes, which are stable to photo-evaporation, are absent from the observations, despite their unique transit radius ($5-10R_\\oplus$). This result suggests that $M_c\\gtrsim 6M_\\oplus$, providing a useful constraint on the poorly-known core mass that may distinguish between different formation theories of gas giants. Alternatively, given a prior estimate of $M_c\\approx 6 M_\\op...

  6. Roche volume filling of star clusters in the Milky Way

    Science.gov (United States)

    Ernst, A.; Just, A.

    2013-03-01

    We examine the ratios rh/rJ of projected half-mass and Jacobi radius as well as rt/rJ of tidal and Jacobi radius for open and globular clusters in the Milky Way using data of both observations and simulations. We applied an improved calculation of rJ for eccentric orbits of globular clusters. A sample of 236 open clusters of Piskunov et al. within the nearest kiloparsec around the Sun has been used. For the Milky Way globular clusters, data are taken from the Harris catalogue. We particularly use the subsample of 38 Milky Way globular clusters for which orbits have been integrated by Dinescu et al. We aim to quantify the differences between open and globular clusters and to understand, why they form two intrinsically distinct populations. We find under certain assumptions, or, in other words, in certain approximations (i) that globular clusters are presently Roche volume underfilling, (ii) with at least 3σ confidence that the ratio rh/rJ of half-mass and Jacobi radius is three to five times larger at present for an average open cluster in our sample than for an average globular cluster in our sample and (iii) that a significant fraction of globular clusters may be Roche volume overfilling at pericentre with rt > rJ. Another aim of this paper is to throw light on the underlying theoretical reason for the existence of the van den Bergh correlation between half-mass and Galactocentric radius.

  7. Small-scale hydro-electric scheme in Roches, Switzerland; Projet de concession. Petite centrale hydroelectrique de Roches

    Energy Technology Data Exchange (ETDEWEB)

    Hausmann, M.

    2006-07-01

    The small hydropower plant (SHPP) project 'PCH Roches' is planned to be built in Roches, a small village located in the Jura region of the canton of Bern. The goal of this undertaking is to reactivate a site with hydro potential of the river Birs on a section that was already well exploited by some ancient SHPP (since 1953 or probably even earlier). Several modifications were performed on this plant over the years; not all contributed positively on its production figures. Following a transfer of the water rights in 1987, claims became loud against the owner to perform maintenance on the river banks and to modify the weir such that a free passage for the fishes will be granted. Those issues contributed to inflate a conflict which ended in the repeal of the water rights and a total plant shut down in 2001. The new project plans to reuse the existing pen stock and to carry out some refurbishing activities to grant security and better performance. The weir and the intake structure are also redesigned such that the water storage can be somewhat raised for normal operation; a weir gate will however allow to better discharge the river in flood situations. A new turbine house will be erected at the current location where the tail water pen stock rejoins the river. Hence, the existing old turbine house will be obsolete and the upper and lower pen stock sections are to be linked with each other. Limited by the existing pen stock size, the new plant is expected to produce some 50 kW power and 362,000 kWh/year. This represents an increase in energy generation of around 200% compared with the ancient SHPP. Gross head is 5.38 m, net head 4.12 m with a turbine flow of at least 1.6 m{sup 3}/s. The expected energy sales price applicable to this project reaches about 0.17 CHF/kWh as per the current tariffs set by the grid owner. This project calls for the building of a state-of-the-art SHPP. It will avoid the total dismantling of the existing works to take place and allow

  8. Tidal Decay and Roche-Lobe Overflow of Gaseous Exoplanets

    Science.gov (United States)

    Jackson, Brian; Jensen, Emily; Peacock, Sarah; Arras, Phil; Penev, Kaloyan

    2016-10-01

    Many gaseous exoplanets in short-period orbits are on the verge or are in the process of Roche-lobe overflow (RLO). Moreover, orbital stability analysis shows tides can drive many hot Jupiters to spiral inevitably toward their host stars, and the distributions of orbital periods and semi-major axes point to non-negligible orbital decay during the main sequence lifetimes of the host stars. Thus, the coupled processes of orbital evolution and RLO likely shape the observed distribution of close-in exoplanets. However, the exact outcome for an overflowing planet depends on its internal response to mass loss, and the accompanying orbital evolution can act to enhance or inhibit RLO. Applying the Modules for Experiments in Stellar Astrophysics (MESA) suite to model RLO, we find that, although the detailed evolution may depend on several properties of the planetary system, it is largely determined by the core mass of the overflowing gas giant. In particular, we find that the orbital expansion that accompanies RLO often stops and reverses at a specific maximum period that depends on the core mass. We suggest that RLO may often strand the remnant of a gas giant near or interior to this orbital period, providing an observational prediction that can corroborate the RLO hypothesis. We conduct a preliminary comparison of this prediction to the observed population of small, short-period planets and find some planets in orbits that may be consistent with this picture.

  9. Roche volume filling of star clusters in the Milky Way

    CERN Document Server

    Ernst, A

    2012-01-01

    We examine the ratios $r_h/r_J$ of projected half-mass and Jacobi radius as well as $r_t/r_J$ of tidal and Jacobi radius for open and globular clusters in the Milky Way using data of both observations and simulations. We applied an improved calculation of $r_J$ for eccentric orbits of globular clusters. A sample of 236 open clusters of Piskunov et al. within the nearest kiloparsec around the Sun has been used. For the Milky Way globular clusters, data are taken from the Harris catalogue. We particularly use the subsample of 38 Milky Way globular clusters for which orbits have been integrated by Dinescu et al. We aim to quantify the differences between open and globular clusters and to understand, why they form two intrinsically distinct populations. We find under certain assumptions, or, in other words, in certain approximations, (i) that globular clusters are presently Roche volume underfilling and (ii) with at least $3\\sigma$ confidence that the ratio $r_h/r_J$ of half-mass and Jacobi radius is $3 - 5$ time...

  10. Disainmööbel Roche Bobois, kokteil sarmist ja romantikast / Reet Krause

    Index Scriptorium Estoniae

    Krause, Reet, 1967-

    2004-01-01

    Luksuslikku kodumööblit tootvast prantsuse firmast. Firma disainerid itaallased Paola Navone ja Massimo Iosa Ghini, Vladimir Kagan, Hans Hopper ja prantslased Jean Claude Magirard ja Sylvain Joly. Philippe Roche ja disainer Hans Hopperi kommentaar

  11. Disainmööbel Roche Bobois, kokteil sarmist ja romantikast / Reet Krause

    Index Scriptorium Estoniae

    Krause, Reet, 1967-

    2004-01-01

    Luksuslikku kodumööblit tootvast prantsuse firmast. Firma disainerid itaallased Paola Navone ja Massimo Iosa Ghini, Vladimir Kagan, Hans Hopper ja prantslased Jean Claude Magirard ja Sylvain Joly. Philippe Roche ja disainer Hans Hopperi kommentaar

  12. Unstable Roche-Lobe Overflow of Gaseous Planets

    Science.gov (United States)

    Jackson, Brian

    The discoveries of more than 100 roughly Earth-sized bodies with orbital periods less than 1 day, ultra-short-period planets or candidates (USPs), have challenged planet formation theories, and evidence suggests USPs may be the remnants of gaseous planets that shed their atmospheres. Indeed, many hot Jupiters are near Roche-Lobe overflow (RLO), and tidal decay can push them the rest of the way in. Recent work has shown stable RLO (atmospheres lost via a steady outflow and thin accretion disk) probably cannot produce USPs on its own but suggested unstable RLO (atmospheres quickly shed on dynamical timescales) may. In fact, stable RLO may drive overflowing hot Jupiters into unstable RLO, and by analogy with the common-envelope binaries, the core that remains can drive off the gaseous envelope at the cost of its orbital energy. Wellestablished mass-radius relations for gaseous planets, coupled to simple energy and angular momentum considerations, provide a connection between the observed masses and periods for USPs and their putative progenitor gaseous planets, with few free parameters. We propose to investigate the hypothesis that USPs originate through tidal decay and a combination of stable and unstable Roche-lobe overflow of short-period gaseous planets through the following studies: -We will explore the planetary masses, orbital periods, etc. that produce unstable RLO using the Modules for Experiments in Stellar Astrophysics (MESA) suite. -We will relate the observed periods and masses of USPs to their putative progenitor masses and periods to see whether they are consistent with the unstable RLO hypothesis. This proposal is directly relevant to the Exoplanets Research Program since it seeks to "understand the ... physical processes of exoplanets" and "improve understanding of [their] origins" through "theoretical studies ... and modeling'". We also expect that it will have broad impacts on a variety of astrophysical topics: -Ultra-short period planets could

  13. Performance of the Roche LightCycler real-time PCR assay for diagnosing extrapulmonary tuberculosis.

    Science.gov (United States)

    Gous, N; Scott, L E; Wong, E; Omar, T; Venter, W D F; Stevens, W

    2012-06-01

    The Roche LightCycler mycobacterium detection molecular assay for Mycobacterium tuberculosis, M. avium, and M. kansasii, was applied to tissue specimens. It performed well on lymph node and cerebrospinal fluid specimens and less well on lung, liver, and bone marrow core biopsy specimens, but used in conjunction with a clinical suspicion of tuberculosis, it could augment patient management.

  14. Analytical validation of the Roche 25-OH Vitamin D Total assay

    DEFF Research Database (Denmark)

    Knudsen, Cindy Soendersoe; Nexo, Ebba; Højskov, Carsten Schriver;

    2012-01-01

    Background: Vitamin D deficiency is considered a major health issue and therefore there is a need for reliable routine tests for measurement of the vitamin in blood samples. Here we present a validation of the recently released Roche 25-OH Vitamin D Total assay (Vitamin D Total). Methods: We anal...

  15. 75 FR 71135 - Hoffmann-La Roche Inc.; Withdrawal of Approval of a New Drug Application

    Science.gov (United States)

    2010-11-22

    ... HUMAN SERVICES Food and Drug Administration Hoffmann-La Roche Inc.; Withdrawal of Approval of a New Drug... Administration (FDA) is withdrawing approval of a new drug application (NDA) for ACCUTANE (isotretinoin) Capsules... be marketed under approved abbreviated new drug applications (ANDAs). The holders of ANDAs...

  16. Thermal waters as cosmeceuticals: La Roche-Posay thermal spring water example

    Directory of Open Access Journals (Sweden)

    Seite S

    2013-01-01

    Full Text Available Sophie SeiteLa Roche-Posay Pharmaceutical Laboratories, Asnières, FranceAbstract: The curative use of thermal spring water is well known, but further investigation of its biological properties and therapeutic benefits is necessary. This present article reports all available scientific data concerning La Roche-Posay Thermal Spring Water and provides a better understanding of the biological mechanism of action of this water in regard to its composition and physicochemical properties and its clinical benefits for patients. These data justify the use of this selenium-rich water as an active or “cosmeceutical” ingredient in topical formulations to increase quality of life and compliance in patients with chronic disease.Keywords: thermal spring water, selenium, biological properties, curative use

  17. Life near the Roche limit - Behavior of ejecta from satellites close to planets

    Science.gov (United States)

    Dobrovolskis, A. R.; Burns, J. A.

    1980-01-01

    A study of the dynamics of nearby debris from impact craters was made to explain the distinctive features seen on Phobos, Deimis, and Amalthea. The planetary tides and satellite rotation were considered, and the usual pseudo-energy (Jacobi) integral was numerically calculated in the framework of a restricted body problem where satellites are modelled as triaxial ellipsoids rather than point masses. Iso-contours of this integral show that Deimos and Amalthea are entirely closed by Roche lobes, and the surfaces of their model ellipsoids lie nearly along equipotentials. Presently, the surface of Phobos overflows its Roche lobe, except for regions within a few km of the sub-Mars and anti-Mars points. The behavior of crater ejecta from the satellites of Mars were also examined by numerical integration of trajectories for particles leaving their surfaces in the equatorial plane.

  18. On the Use of Roche Equipotentials in Analysing the Problems of Binary and Rotating Stars

    Indian Academy of Sciences (India)

    A. Pathania; A. K. Lal; C. Mohan

    2013-03-01

    Kopal (Adv. Astron. Astrophys., 9, 1, 1972) introduced the concept of Roche equipotentials to analyse the effects of rotational and tidal distortions in case of stars in binary systems. In this approach a mathematical expression for the potential of a star in a binary system is obtained by approximating its inner structure with Roche model. This expression for the potential has been used in subsequent analysis by various authors to analyse the problems of structures and oscillations of synchronous and nonsynchronus binary stars as well as single rotating stars. Occasionally, doubts have been expressed regarding the validity of the use of this approach for analysing nonsynchronous binaries and rotationally and tidally distorted single stars. In this paper we have tried to clarify these doubts.

  19. From Hot Jupiters to Super-Earths via Roche Lobe Overflow

    CERN Document Server

    Valsecchi, Francesca; Steffen, Jason H

    2014-01-01

    Through tidal dissipation in a slowly spinning host star the orbits of many hot Jupiters may decay down to the Roche limit. We expect that in most cases the ensuing mass transfer will be stable. Using detailed numerical calculations we find that this evolution is quite rapid, potentially leading to complete removal of the gaseous envelope in a few Gyr, and leaving behind an exposed rocky core ("hot super-Earth"). Final orbital periods are quite sensitive to the details of the planet's mass-radius relation, and to the effects of irradiation and photo-evaporation, but could be as short as a few hours, or as long as several days. Our scenario predicts the existence of planets with intermediate masses ("hot Neptunes") that should be found precisely at their Roche limit and in the process of losing mass through Roche lobe overflow. The observed excess of small single-planet candidate systems observed by Kepler may also be the result of this process. If so, the properties of their host stars should track those of t...

  20. Roche DAT immunoassay: sensitivity and specificity testing for amphetamines, cocaine, and opiates in oral fluid.

    Science.gov (United States)

    Crooks, C Richard; Brown, Sue

    2010-03-01

    Laboratory testing of oral fluid for drugs of abuse continues to expand in the workplace, legal, treatment, and health settings. In this study, we assessed recently developed homogeneous Roche DAT screening assays for amphetamines, cocaine metabolite [benzoylecgonine (BZE)], methamphetamines, and opiates in oral fluid. Precision and accuracy were assessed using control samples at +/-25% of cutoff. Sensitivity, specificity, and agreement compared to liquid chromatography-tandem mass spectrometry (LC-MS-MS) was assessed by analysis of oral fluid specimens collected from 994 subjects enrolled in a drug treatment or probation and parole drug-testing program. An additional 180 research specimens from Kroll Laboratories were analyzed for amphetamine and methamphetamine. Screening cutoff concentrations (ng/mL) were as follows: amphetamines, 40; cocaine metabolite, 3; methamphetamines, 40; and opiates, 10. LC-MS-MS analyses were performed with the following cutoff concentrations (ng/mL): amphetamine, 40; BZE, 2.0; methamphetamine, 40; and codeine or morphine, 10. The percent coefficient of variation ranged from 3.4% to 7.3%. Sensitivity and specificity of the Roche DAT assays compared to LC-MS-MS were > 94%, and agreement was > 96% for the four assays. The performance of the Roche DAT assays suggests these new homogeneous screening assays will be an attractive alternative to existing more labor-intensive enzyme immunoassays.

  1. Tidally-driven Roche-Lobe Overflow of Hot Jupiters with MESA

    CERN Document Server

    Valsecchi, Francesca; Rasio, Frederic A; Marchant, Pablo; Rogers, Leslie A

    2015-01-01

    Many exoplanets have now been detected in orbits with ultra-short periods, very close to the Roche limit. Building upon our previous work, we study the possibility that mass loss through Roche lobe overflow (RLO) may affect the evolution of these planets, and could possibly transform a hot Jupiter into a lower-mass planet (hot Neptune or super-Earth). We focus here on systems in which the mass loss occurs slowly ("stable mass transfer" in the language of binary star evolution) and we compute their evolution in detail with the binary evolution code MESA. We include the effects of tides, RLO, irradiation and photo-evaporation of the planet, as well as the stellar wind and magnetic braking. Our calculations all start with a hot Jupiter close to its Roche limit, in orbit around a sun-like star. The initial orbital decay and onset of RLO are driven by tidal dissipation in the star. We confirm that such a system can indeed evolve to produce lower-mass planets in orbits of a few days. The RLO phase eventually ends a...

  2. Galaxies with Supermassive Binary Black Holes: (III) The Roche Lobes and Jiang-Yeh Lobe in a Core System

    CERN Document Server

    Yeh, Li-Chin

    2016-01-01

    Three-dimensional equi-potential surfaces of a galactic system with supermassive binary black holes are discussed herein. The conditions of topological transitions for the important surfaces, i.e. Roche Lobes and Jiang-Yeh Lobe, are studied in this paper. In addition, the mathematical properties of the Jacobi surfaces are investigated analytically. Finally, a numerical procedure for determining the regions of the Roche Lobes and Jiang-Yeh Lobe is suggested.

  3. Tidally-driven Roche-lobe Overflow of Hot Jupiters with MESA

    Science.gov (United States)

    Valsecchi, Francesca; Rappaport, Saul; Rasio, Frederic A.; Marchant, Pablo; Rogers, Leslie A.

    2015-11-01

    Many exoplanets have now been detected in orbits with ultra-short periods very close to the Roche limit. Building upon our previous work, we study the possibility that mass loss through Roche lobe overflow (RLO) may affect the evolution of these planets, and could possibly transform a hot Jupiter into a lower-mass planet (hot Neptune or super-Earth). We focus here on systems in which the mass loss occurs slowly (“stable mass transfer” in the language of binary star evolution) and we compute their evolution in detail with the binary evolution code Modules for Experiments in Stellar Astrophysics. We include the effects of tides, RLO, irradiation, and photo-evaporation (PE) of the planet, as well as the stellar wind and magnetic braking. Our calculations all start with a hot Jupiter close to its Roche limit, in orbit around a Sun-like star. The initial orbital decay and onset of RLO are driven by tidal dissipation in the star. We confirm that such a system can indeed evolve to produce lower-mass planets in orbits of a few days. The RLO phase eventually ends and, depending on the details of the mass transfer and on the planetary core mass, the orbital period can remain around a few days for several Gyr. The remnant planets have rocky cores and some amount of envelope material, which is slowly removed via PE at a nearly constant orbital period; these have properties resembling many of the observed super-Earths and sub-Neptunes. For these remnant planets, we also predict an anti-correlation between mass and orbital period; very low-mass planets (Mpl ≲ 5 M⊕) in ultra-short periods (Porb < 1 day) cannot be produced through this type of evolution.

  4. TIDALLY DRIVEN ROCHE-LOBE OVERFLOW OF HOT JUPITERS WITH MESA

    Energy Technology Data Exchange (ETDEWEB)

    Valsecchi, Francesca; Rasio, Frederic A. [Center for Interdisciplinary Exploration and Research in Astrophysics (CIERA), and Northwestern University, Department of Physics and Astronomy, Evanston, IL 60208 (United States); Rappaport, Saul [Department of Physics, and Kavli Institute for Astrophysics and Space Research, Massachusetts Institute of Technology, Cambridge, MA 02139 (United States); Marchant, Pablo [Argelander-Institut für Astronomie, Universität Bonn, Auf dem Hgel 71, D-53121 Bonn (Germany); Rogers, Leslie A., E-mail: francesca@u.northwestern.edu, E-mail: rasio@northwestern.edu, E-mail: sar@mit.edu, E-mail: pablo@astro.uni-bonn.de, E-mail: larogers@caltech.edu [Department of Astronomy and Department of Geophysics and Planetary Sciences, California Institute of Technology, Pasadena, CA 91125 (United States)

    2015-11-10

    Many exoplanets have now been detected in orbits with ultra-short periods very close to the Roche limit. Building upon our previous work, we study the possibility that mass loss through Roche lobe overflow (RLO) may affect the evolution of these planets, and could possibly transform a hot Jupiter into a lower-mass planet (hot Neptune or super-Earth). We focus here on systems in which the mass loss occurs slowly (“stable mass transfer” in the language of binary star evolution) and we compute their evolution in detail with the binary evolution code Modules for Experiments in Stellar Astrophysics. We include the effects of tides, RLO, irradiation, and photo-evaporation (PE) of the planet, as well as the stellar wind and magnetic braking. Our calculations all start with a hot Jupiter close to its Roche limit, in orbit around a Sun-like star. The initial orbital decay and onset of RLO are driven by tidal dissipation in the star. We confirm that such a system can indeed evolve to produce lower-mass planets in orbits of a few days. The RLO phase eventually ends and, depending on the details of the mass transfer and on the planetary core mass, the orbital period can remain around a few days for several Gyr. The remnant planets have rocky cores and some amount of envelope material, which is slowly removed via PE at a nearly constant orbital period; these have properties resembling many of the observed super-Earths and sub-Neptunes. For these remnant planets, we also predict an anti-correlation between mass and orbital period; very low-mass planets (M{sub pl} ≲ 5 M{sub ⊕}) in ultra-short periods (P{sub orb} < 1 day) cannot be produced through this type of evolution.

  5. Exo-Mercury Analogues and the Roche Limit for Close-Orbiting Rocky Planets

    Science.gov (United States)

    Rogers, Leslie A.; Price, Ellen

    2015-12-01

    The origin of Mercury's enhanced iron content is a matter of ongoing debate. The characterization of rocky exoplanets promises to provide new independent insights on this topic, by constraining the occurrence rate and physical and orbital properties of iron-enhanced planets orbiting distant stars. The ultra-short-period transiting planet candidate KOI-1843.03 (0.6 Earth-radius, 4.245 hour orbital period, 0.46 Solar-mass host star) represents the first exo-Mercury planet candidate ever identified. For KOI-1843.03 to have avoided tidal disruption on such a short orbit, Rappaport et al. (2013) estimate that it must have a mean density of at least 7g/cc and be at least as iron rich as Mercury. This density lower-limit, however, relies upon interpolating the Roche limits of single-component polytrope models, which do not accurately capture the density profiles of >1000 km differentiated rocky bodies. A more exact calculation of the Roche limit for the case of rocky planets of arbitrary composition and central concentration is needed. We present 3D interior structure simulations of ultra-short-period tidally distorted rocky exoplanets, calculated using a modified version of Hachisu’s self-consistent field method and realistic equations of state for silicates and iron. We derive the Roche limits of rocky planets as a function of mass and composition, and refine the composition constraints on KOI-1843.03. We conclude by discussing the implications of our simulations for the eventual characterization of short-period transiting planets discovered by K2, TESS, CHEOPS and PLATO.

  6. Teorema de Riemann-Roch, morfismos de Frobenius e a hipótese de Riemann

    OpenAIRE

    2014-01-01

    The aim of this work is to estimate a bound for the number of rational points of a curve. Observing the various similarities between the ring of integers and the ring of polynomials in one variable, we use tools from number theory to solve a problem of algebraic geometry. From this merger is born one of the noblest areas of mathematics: arithmetic geometry. Making use of the famous Riemann-Roch's theorem and tools of number theory we demonstrate the Riemann hypothesis for the zeta-function of...

  7. Self-sustained strong mass transfer without Roche lobe overflow - Cygnus X-3

    Science.gov (United States)

    Tavani, Marco; Ruderman, Malvin; Shaham, Jacob

    1989-01-01

    It is proposed that the binary evolution of Cyg X-3 is driven by a self-excited wind from a solar composition companion star sustained by radiation from a neutron star primary. Observations would then imply that the companion is a white dwarf underfilling its Roche lobe, with mass between 0.01 and 0.03 solar masses. Cyg X-3 could then be in the late stage of very low mass X-ray binary evolution expected to result in a millisecond pulsar binary similar to the eclipsing system PSR 1957 + 20.

  8. Wind Roche-lobe overflow: Application to carbon-enhanced metal-poor stars

    CERN Document Server

    Abate, C; Izzard, R G; Mohamed, S S; de Mink, S E

    2013-01-01

    Carbon-enhanced metal-poor stars (CEMP) are observed as a substantial fraction of the very metal-poor stars in the Galactic halo. Most CEMP stars are also enriched in s-process elements and these are often found in binary systems. This suggests that the carbon enrichment is due to mass transfer in the past from an asymptotic giant branch (AGB) star on to a low-mass companion. Models of binary population synthesis are not able to reproduce the observed fraction of CEMP stars without invoking non-standard nucleosynthesis or a substantial change in the initial mass function. This is interpreted as evidence of missing physical ingredients in the models. Recent hydrodynamical simulations show that efficient wind mass transfer is possible in the case of the slow and dense winds typical of AGB stars through a mechanism called wind Roche-lobe overflow (WRLOF), which lies in between the canonical Bondi-Hoyle-Lyttleton (BHL) accretion and Roche-lobe overflow. WRLOF has an effect on the accretion efficiency of mass tran...

  9. iAssembler: a package for de novo assembly of Roche-454/Sanger transcriptome sequences

    Directory of Open Access Journals (Sweden)

    Zheng Yi

    2011-11-01

    Full Text Available Abstract Background Expressed Sequence Tags (ESTs have played significant roles in gene discovery and gene functional analysis, especially for non-model organisms. For organisms with no full genome sequences available, ESTs are normally assembled into longer consensus sequences for further downstream analysis. However current de novo EST assembly programs often generate large number of assembly errors that will negatively affect the downstream analysis. In order to generate more accurate consensus sequences from ESTs, tools are needed to reduce or eliminate errors from de novo assemblies. Results We present iAssembler, a pipeline that can assemble large-scale ESTs into consensus sequences with significantly higher accuracy than current existing assemblers. iAssembler employs MIRA and CAP3 assemblers to generate initial assemblies, followed by identifying and correcting two common types of transcriptome assembly errors: 1 ESTs from different transcripts (mainly alternatively spliced transcripts or paralogs are incorrectly assembled into same contigs; and 2 ESTs from same transcripts fail to be assembled together. iAssembler can be used to assemble ESTs generated using the traditional Sanger method and/or the Roche-454 massive parallel pyrosequencing technology. Conclusion We compared performances of iAssembler and several other de novo EST assembly programs using both Roche-454 and Sanger EST datasets. It demonstrated that iAssembler generated significantly more accurate consensus sequences than other assembly programs.

  10. A New Model of Roche Lobe Overflow for Short-period Gaseous Planets and Binary Stars

    Science.gov (United States)

    Jackson, Brian; Arras, Phil; Penev, Kaloyan; Peacock, Sarah; Marchant, Pablo

    2017-02-01

    Some close-in gaseous exoplanets are nearly in Roche lobe contact, and previous studies show that tidal decay can drive hot Jupiters into contact during the main sequence of their host stars. Improving on a previous model, we present a revised model for mass transfer in a semidetached binary system that incorporates an extended atmosphere around the donor and allows for an arbitrary mass ratio. We apply this new formalism to hypothetical, confirmed, and candidate planetary systems to estimate mass-loss rates and compare with models of evaporative mass loss. Overflow may be significant for hot Neptunes out to periods of ∼2 days, while for hot Jupiters, it may only be important inward of 0.5 days. We find that CoRoT-24 b may be losing mass at a rate of more than an Earth mass in a gigayear. The hot Jupiter WASP-12 b may lose an Earth mass in a megayear, while the putative planet PTFO8-8695 orbiting a T Tauri star might shed its atmosphere in a few megayears. We point out that the orbital expansion that can accompany mass transfer may be less effective than previously considered because the gas accreted by the host star removes some of the angular momentum from the orbit, but simple scaling arguments suggest that the Roche lobe overflow might remain stable. Consequently, the recently discovered small planets in ultrashort periods (model presented here has been incorporated into Modules for Experiments in Stellar Astrophysics (MESA).

  11. Racialized Spaces in Teacher Discourse: A Critical Discourse Analysis of Place-Based Identities in Roche Bois, Mauritius

    Science.gov (United States)

    Wiehe, Elsa M.

    2013-01-01

    This eleven-month ethnographic study puts critical discourse analysis in dialogue with postmodern conceptualizations of space and place to explore how eight educators talk about space and in the process, produce racialized spaces in Roche Bois, Mauritius. The macro-historical context of racialization of this urban marginalized community informs…

  12. Loyalty rebates after intel : Time for the European Court of Justice to overrule Hoffman-La Roche

    NARCIS (Netherlands)

    Geradin, Damien

    In June 2014, the GCEU confirmed the Decision of the European Commission that condemned Intel for breaching Article 102 TFEU by adopting exclusive rebates and “naked restrictions.” This judgment, in which the GCEU considered that in line with Hoffman-La Roche loyalty rebates should be quasi-per se

  13. Correlación en la medición de la carga viral para VIH 1 entre las técnicas de PCR amplicor y PCR tiempo real

    OpenAIRE

    2009-01-01

    El objetivo es determinar el nivel de correlación de la cuantificación de carga viral para VIH-1 mediante las técnicas Amplicor HIV-1 Monitor Versión Estándar y Sistema COBAS Ampliprep/COBAS Taqman 48 HIV-1; los materiales y métodos due que se realizó un estudio correlacional, se incluyó 152 muestras de plasma, de personas viviendo con VIH/SIDA que se encuentran en el Sistema de Monitoreo de TARGA del INS. Las muestras incluidas tenían carga viral en rango de 400 a 750,000 copias/mL, y se a...

  14. Roche tomography of cataclysmic variables - VI. Differential rotation of AE Aqr - Not tidally locked!

    CERN Document Server

    Hill, Colin; Shahbaz, Tariq; Steeghs, Danny; Dhillon, Vik

    2014-01-01

    We present Roche tomograms of the K4V secondary star in the cataclysmic variable AE Aqr, reconstructed from two datasets taken 9 days apart, and measure the differential rotation of the stellar surface. The tomograms show many large, cool starspots, including a large high-latitude spot and a prominent appendage down the trailing hemisphere. We find two distinct bands of spots around 22$^{\\circ}$ and 43$^{\\circ}$ latitude, and estimate a spot coverage of 15.4-17% on the northern hemisphere. Assuming a solar-like differential rotation law, the differential rotation of AE Aqr was measured using two different techniques. The first method yields an equator-pole lap time of 269 d and the second yields a lap time of 262 d. This shows the star is not fully tidally locked, as was previously assumed for CVs, but has a co-rotation latitude of $\\sim 40^{\\circ}$. We discuss the implications that these observations have on stellar dynamo theory, as well as the impact that spot traversal across the first Lagrangian point ma...

  15. Roche tomography of cataclysmic variables - VII. The long-term magnetic activity of AE Aqr

    CERN Document Server

    Hill, C A; Steeghs, D; Dhillon, V S; Shahbaz, T

    2016-01-01

    We present a long-term study of the secondary star in the cataclysmic variable AE~Aqr, using Roche tomography to indirectly image starspots on the stellar surface spanning 8~years of observations. The 7 maps show an abundance of spot features at both high and low latitudes. We find that all maps have at least one large high-latitude spot region, and we discuss its complex evolution between maps, as well as its compatibility with current dynamo theories. Furthermore, we see the apparent growth in fractional spot coverage, $f_{\\mathrm{s}}$, around $45^{\\circ}$~latitude over the duration of observations, with a persistently high $f_{\\mathrm{s}}$ near latitudes of $20^{\\circ}$. These bands of spots may form as part of a magnetic activity cycle, with magnetic flux tubes emerging at different latitudes, similar to the `butterfly' diagram for the Sun. We discuss the nature of flux tube emergence in close binaries, as well as the activity of AE~Aqr in the context of other stars.

  16. The evolution of triples with a Roche-lobe filling outer star

    CERN Document Server

    de Vries, Nathan; Figueira, Joana

    2013-01-01

    The evolution of triples has not attracted much attention in the literature, although their evolution can be dramatically different from binaries and single stars. Triples are quite common, and we find that for about 1% of the triples in the Tokovinin catalogue of multiple stellar systems in the solar neighbourhood, the tertiary star will overflow its Roche lobe at some time in its evolution, before any of the inner stars leave the main sequence. For two of these systems, Xi Tauri and HD97131 we simulate in detail this phase of mass transfer, during which stellar evolution, gravitational dynamics and hydrodynamics all play an important role. We have used the Astrophysical Multi-purpose Software Environment (AMUSE) to solve these physical processes in a self-consistent way. The resulting evolution, mass transfer and the effects on the inner as well as on the outer orbit are profound, although it is not trivial to predict the eventual consequence of the phase of mass transfer and the appearance of the resulting...

  17. Evaluation of the Roche CoaguChek XS handheld coagulation analyzer in a cardiac outpatient clinic.

    Science.gov (United States)

    Nam, Myung-Hyun; Roh, Kyoung Ho; Pak, Hui-Nam; Lee, Chang Kyu; Kim, Young-Hoon; Lee, Kap No; Cho, Yunjung

    2008-01-01

    This study evaluated the performance of a handheld coagulation analyzer for measurements of capillary blood specimens of 93 outpatient cardiology patients with atrial fibrillation who were receiving oral anti-coagulant therapy. The international normalized ratio (INR) results of the CoaguChek XS system (Roche Diagnostics) were compared with those obtained in the central laboratory with citrated venous blood specimens using the ACL9000 coagulation analyzer (Instrumentation Laboratory). The INR results for prothrombin time by the CoaguChek XS analyzer were closely correlated with the central laboratory's results in the INR range of 0.96 approximately 8.53 (r = 0.964). A statistically significant difference was noted between 2 lots of test strips, but the difference was miniscule (mean +/- 95% confidence interval: 0.04+/-0.02). The CV of 8 replicate assays with the CoaguChek XS for a blood specimen with high INR value (INR=3.9) was 1.4%; for a blood specimen with medium INR value (INR=1.3), the CV of 8 replicate assays was XS analyzer is precise and reliable for assessment of INR results at clinically significant ranges in cardiac outpatients.

  18. Structures in the D ring and Roche division tied to asymmetries in Saturn's magnetosphere

    Science.gov (United States)

    Chancia, Robert O.; Hedman, Matthew M.; Carter, Brian

    2016-10-01

    Saturn's dusty rings contain multiple patterns that appear to be rotating around the planet at about the same rate as Saturn itself, and so are probably generated by resonances with asymmetries in the planet's gravitational or magnetic fields. These structures are found in the D ring (which lies interior to the main rings) and in the Roche Division (which is located just outside the main rings, between the A and F rings). In 2007 the strongest patterns in both of these regions appeared to track magnetospheric anomalies associated with the Saturn Kilometric Radiation (SKR). This implied that these rings were responding to structures in the planet's magnetosphere, which is not unreasonable since the particles in both these ring regions are very small and therefore sensitive to non-gravitational forces. Over the last few years, the frequencies of the SKR and related magnetospheric asymmetries have shifted, and we have observed some changes in the ring patterns that might be connected with these shifts. However, there are also patterns in these rings that appear to have more stable rotation rates and so could reflect more persistent asymmetries in Saturn's magnetosphere. These patterns can therefore provide novel insights into the structure and evolution of Saturn's magnetosphere.

  19. The N(o)ther and Riemann-Roch type theorems for piecewise algebraic curve

    Institute of Scientific and Technical Information of China (English)

    Yi-sheng LAI; Ren-hong WANG

    2007-01-01

    A piecewise algebraic curve is a curve determined by the zero set of a bivariate spline function. In this paper, the N(o)ther type theorems for Cμ piecewise algebraic curves are obtained.The theory of the linear series of sets of places on the piecewise algebraic curve is also established.In this theory, singular cycles are put into the linear series, and a complete series of the piecewise algebraic curves consists of all effective ordinary cycles in an equivalence class and all effective singular cycles which are equivalent specifically to any effective ordinary cycle in the equivalence class. This theory is a generalization of that of linear series of the algebraic curve. With this theory and the fundamental theory of multivariate splines on smoothing cofactors and global conformality conditions,and the results on the general expression of multivariate splines, we get a formula on the index, the order and the dimension of a complete series of the irreducible Cμ piecewise algebraic curves and the degree, the genus and the smoothness of the curves, hence the Riemann-Roch type theorem of the Cμpiecewise algebraic curve is established.

  20. The Nother and Riemann-Roch type theorems for piecewise algebraic curve

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    A piecewise algebraic curve is a curve determined by the zero set of a bivariate spline function. In this paper, the Nother type theorems for Cμpiecewise algebraic curves are obtained. The theory of the linear series of sets of places on the piecewise algebraic curve is also established. In this theory, singular cycles are put into the linear series, and a complete series of the piecewise algebraic curves consists of all effective ordinary cycles in an equivalence class and all effective singular cycles which are equivalent specifically to any effective ordinary cycle in the equivalence class. This theory is a generalization of that of linear series of the algebraic curve. With this theory and the fundamental theory of multivariate splines on smoothing cofactors and global conformality conditions, and the results on the general expression of multivariate splines, we get a formula on the index, the order and the dimension of a complete series of the irreducible Cμpiecewise algebraic curves and the degree, the genus and the smoothness of the curves, hence the Riemann-Roch type theorem of the Cμpiecewise algebraic curve is established.

  1. El concepto de límite en el B-Mu de François Roche

    Directory of Open Access Journals (Sweden)

    Eugenio Pandolfini

    2012-12-01

    Full Text Available

    Resumen

    Algunos proyectos, como el Dusty relief/B‐mu (2002 de François Roche demuestran como edificios complejos, que toman distancia desde los modelos mecanicistas para referirse a nuevos paradigmas, se pueden interpretar y comprenderse  mejor gracias a un análisis perceptivo que acerca el proyecto de arquitectura a cuestiones como la relación psicológica del hombre con la arquitectura, el miedo al espacio, y las  patologías  vinculadas a la percepción y a las neurosis modernas.
    En este caso, aparte de las repercusiones que la fachada de  polvo podría tener en el ámbito de la ecología urbana, es interesante analizar algunos aspectos ligados a la dicotomía  entre forma externa y volúmenes internos para la que François Roche cita como referencia el raumplan de Adolf Loos, pero que presenta motivos para una reflexión vinculada a los aspectos  perceptivos.
    El artículo trata de analizar como François Roche proyecta sus edificios extremando la dicotomía entre interior/visual y  exterior/táctil, desarrollando así una nueva relación con el lugar. Roche diseña la fachada exterior del B‐mu autoimponiéndose  una limitación del sentido de la vista, a favor de una dimensión háptica del proyecto y lo hace envolviendo los ámbitos arquitectónicos más familiares de una interfaz abstracta y táctil.

    Palabras clave

    edificio, percepción, entorno, envolvente, límite

    Abstract

    Some projects such as Dusty relief/B‐mu (2002 by François  Roche demonstrate how complex buildings, which distance themselves from the mechanicist models in order to refer  themselves to new paradigms, can be better understood and interpreted thanks to a perceptive analysis.
    This analysis brings the architectural project closer to matters  such as man’s psychological relationship to Architecture, the fear of space

  2. Polyphony and counterpoint: Mechanisms of seduction in the diaries of Helen Hessel and Henri Pierre Roché

    Directory of Open Access Journals (Sweden)

    Catherine du Toit

    2015-06-01

    Full Text Available Henri Pierre Roché (1879–1959, the author of Jules et Jim, has been called a general introducer, an exemplary amateur, a collector of women and art and one of the most prolific diarists and active lovers in recorded history. Author of a collection of vignettes about Don Juan, Roché was fascinated with the figure of the seducer and in his twenties planned to devote his life to the creation of a body of work which would examine moral, intellectual, social and sexual relations between women and men. To this end, he would transform his life into a laboratory where real-life experiences would become the main source of reference. Roché’s diary spans sixty years and abounds in tales of seduction. However, the most intense and captivating intrigue of seduction and betrayal in his diary, is his relationship with Helen Hessel. At the start of their affair, Roché suggested that she too should keep a diary of the maelstrom of passion into which they were plunged. Written in French, German and English, Helen Hessel’s diary captures the drama of seduction and functions on several levels: realistic, visionary, absorbed in her thoughts and emotions and yet critical of herself and others. A juxtaposed reading of the two diaries generates a fascinatingly dense texture, revealing the mechanisms of seduction at play. The counterpoint created by these two interdependent voices becomes ever more complex as one becomes aware of the intertextual references that contribute to the emerging polyphony of recorded life and love.Polifonie en kontrapunt: Meganismes van verleiding in die dagboeke van Helen Hessel en Henri Pierre Roché. Henri Pierre Roché (1879–1959, outeur van Jules et Jim, word beskryf as ‘n sosiale koppelaar, ‘n model-liefhebber van alles en nog wat, ‘n versamelaar van vroue en kuns en een van die mees produktiewe dagboekskrywers en aktiewe minnaars in die opgetekende geskiedenis. Roché het ‘n reeks sketse oor Don Juan gepubliseer en

  3. The Quasi-Roche lobe overflow state in the evolution of Close Binary Systems containing a radio pulsar

    CERN Document Server

    Benvenuto, O G; Horvath, J E

    2014-01-01

    We study the evolution of close binary systems formed by a normal (solar composition), intermediate mass donor star together with a neutron star. We consider models including irradiation feedback and evaporation. These non-standard ingredients deeply modify the mass transfer stages of these binaries. While models that neglect irradiation feedback undergo continuous, long standing mass transfer episodes, models including these effect suffer a number cycles of mass transfer and detachment. During mass transfer the systems should reveal themselves as low-mass X-ray binaries (LMXBs), whereas when detached they behave as a binary radio pulsars. We show that at these stages irradiated models are in a Roche lobe overflow (RLOF) state or in a quasi-RLOF state. Quasi-RLOF stars have a radius slightly smaller than its Roche lobe. Remarkably, these conditions are attained for orbital period and donor mass values in the range corresponding to a family of binary radio pulsars known as "redbacks". Thus, redback companions ...

  4. SUB-SIGNATURE OPERATORS, η-INVARIANTS AND A RIEMANN-ROCH THEOREM FOR FLAT VECTOR BUNDLES

    Institute of Scientific and Technical Information of China (English)

    张伟平

    2004-01-01

    The author presents an extension of the Atiyah-Patodi-Singer invariant for unitary representations [2, 3] to the non-unitary case, as well as to the case where the base manifold admits certain finer structures. In particular, when the base manifold has a fibration structure, a Riemann-Roch theorem for these invariants is established by computing the adiabatic limits of the associated η-invariants.

  5. QTrim : a novel tool for the quality trimming of sequence reads generated using the Roche/454 sequencing platform

    OpenAIRE

    Shrestha, Ram; Lubinsky, Baruch; Bansode, Vijay B; Moinz, Mónica B. J.; McCormack, Grace P.; Travers, Simon A

    2014-01-01

    Background\\ud Many high throughput sequencing (HTS) approaches, such as the Roche/454 platform, produce sequences in which the quality of the sequence (as measured by a Phred-like quality scores) decreases linearly across a sequence read. Undertaking quality trimming of this data is essential to enable confidence in the results of subsequent downstream analysis. Here, we have developed a novel, highly sensitive and accurate approach (QTrim) for the quality trimming of sequence reads generated...

  6. A Comparison of the Roche Cobas HPV Test With the Hybrid Capture 2 Test for the Detection of High-Risk Human Papillomavirus Genotypes

    National Research Council Canada - National Science Library

    Levi, Angelique W; Bernstein, Jane I; Hui, Pei; Duch, Kara; Schofield, Kevin; Chhieng, David C

    2016-01-01

    All Food and Drug Administration-approved methods in the United States for human papillomavirus testing including the Hybrid Capture 2 human papillomavirus assay and the Roche cobas human papilloma...

  7. Elevated ethyl methanesulfonate (EMS in nelfinavir mesylate (Viracept®, Roche: overview

    Directory of Open Access Journals (Sweden)

    Jones Judith K

    2009-08-01

    Full Text Available Abstract Roche's protease inhibitor nelfinavir mesylate (Viracept® produced between March 2007-June 2007 was found to contain elevated levels of ethyl methanesulfonate (EMS, a known mutagen (alkylator – leading to a global recall of the drug. EMS levels in a daily dose (2,500 mg Viracept/day were predicted not to exceed a dose of ~2.75 mg/day (~0.055 mg/kg/day based on 50 kg patient. As existing toxicology data on EMS did not permit an adequate patient risk assessment, a comprehensive animal toxicology evaluation of EMS was conducted. General toxicity of EMS was investigated in rats over 28 days. Two studies for DNA damage were performed in mice; chromosomal damage was assessed using a micronucleus assay and gene mutations were detected using the MutaMouse transgenic model. In addition, experiments designed to extrapolate animal exposure to humans were undertaken. A general toxicity study showed that the toxicity of EMS occurred only at doses ≥ 60 mg/kg/day, which is far above that received by patients. Studies for chromosomal damage and mutations in mice demonstrated a clear threshold effect with EMS at 25 mg/kg/day, under chronic dosing conditions. Exposure analysis (Cmax demonstrated that ~370-fold higher levels of EMS than that ingested by patients, are needed to saturate known, highly conserved, error-free, mammalian DNA repair mechanisms for alkylation. In summary, animal studies suggested that patients who took nelfinavir mesylate with elevated levels of EMS are at no increased risk for carcinogenicity or teratogenicity over their background risk, since mutations are prerequisites for such downstream events. These findings are potentially relevant to >40 marketed drugs that are mesylate salts.

  8. Some physiological changes in Waldsteinia trifolia (Roch. leaves in different months of the year

    Directory of Open Access Journals (Sweden)

    Renata Wojciechowska

    2012-12-01

    Full Text Available The study concerned an evergreen herbal plant Waldsteinia trifolia Roch. This species can be found more and more often in garden plantings in Poland. The aim of the study was to estimate the content of photosynthetic pigments, anthocyanins and dry matter as well as the permeability of cytoplasmatic membranes of Waldsteinia leaves. Plants grew in an ornamental plant collection at the premises of the Faculty of Horticulture of the Agricultural University in Kraków. The study was conducted in 2006 and 2007 in the following months: March, May, June, September, October and November. The permeability of cytoplasmatic membranes was estimated based on electrolyte leakage from leaf discs at 20°C in relation to total electrolytes in the tissue after unfreezing. The first days with temperature drops down to around 0°C in autumn resulted in a decrease in chlorophyll a, b and carotenoid content, but significantly increased anthocyanin content. The ratio of chlorophyll a to b and the ratio of total chlorophylls to carotenoids did not change in particular months. In both years of study, similar changes in dry matter content of the Waldsteinia leaves were observed. Dry matter content significantly increased in June and November and decreased in May and October. In June and in autumn, after first slight frosts, an increase of electrolyte leakage from the leaf discs was observed. However, high dry matter content (40.3% was accompanied by lower permeability of the cytoplasmatic membranes of the leaves after winter during March. These results have shown good adaptation of Waldsteinia trifolia plants to the climatic conditions in Poland.

  9. An in-house real-time polymerase chain reaction: standardisation and comparison with the Cobas Amplicor HBV monitor and Cobas AmpliPrep/Cobas TaqMan HBV tests for the quantification of hepatitis B virus DNA

    Science.gov (United States)

    Santos, Ana Paula de Torres; Levi, José Eduardo; Lemos, Marcilio Figueiredo; Calux, Samira Julien; Oba, Isabel Takano; Moreira, Regina Célia

    2016-01-01

    This study aimed to standardise an in-house real-time polymerase chain reaction (rtPCR) to allow quantification of hepatitis B virus (HBV) DNA in serum or plasma samples, and to compare this method with two commercial assays, the Cobas Amplicor HBV monitor and the Cobas AmpliPrep/Cobas TaqMan HBV test. Samples from 397 patients from the state of São Paulo were analysed by all three methods. Fifty-two samples were from patients who were human immunodeficiency virus and hepatitis C virus positive, but HBV negative. Genotypes were characterised, and the viral load was measure in each sample. The in-house rtPCR showed an excellent success rate compared with commercial tests; inter-assay and intra-assay coefficients correlated with commercial tests (r = 0.96 and r = 0.913, p < 0.001) and the in-house test showed no genotype-dependent differences in detection and quantification rates. The in-house assay tested in this study could be used for screening and quantifying HBV DNA in order to monitor patients during therapy. PMID:26872342

  10. High-throughput sequencing of core STR loci for forensic genetic investigations using the Roche Genome Sequencer FLX platform

    DEFF Research Database (Denmark)

    Fordyce, Sarah L; Avila-Arcos, Maria C; Rockenbauer, Eszter;

    2011-01-01

    The analysis and profiling of short tandem repeat (STR) loci is routinely used in forensic genetics. Current methods to investigate STR loci, including PCR-based standard fragment analyses and capillary electrophoresis, only provide amplicon lengths that are used to estimate the number of STR...... repeat units. These methods do not allow for the full resolution of STR base composition that sequencing approaches could provide. Here we present an STR profiling method based on the use of the Roche Genome Sequencer (GS) FLX to simultaneously sequence multiple core STR loci. Using this method...

  11. CCD Photometry and Roche Modeling of the Eclipsing Overcontact Binary Star System TYC 01963-0488-1

    Science.gov (United States)

    Alton, K. B.

    2016-12-01

    TYC 01963-0488-1 (ASAS J094440+2632.1) is a W UMa binary system (P=0.427036 d) which has been largely overlooked since first being detected nearly 15 years ago by the ROTSE-I telescope. Other than the monochromatic ROTSE-I survey data, no multi-colored light curves (LC) have been published. Photometric data collected in three bandpasses (B, V and Ic) at UnderOak Observatory (UO) produced 5 new times-of-minimum for TYC 01963-0488-1 which were used to establish a linear ephemeris from the first Min I epoch (HJD0). No published radial velocity data are available for this system; however, since this W UMa binary undergoes very obvious total eclipses, Roche modeling yielded a well-constrained photometric value for q ( 0.25). There is a suggestion from the ROTSE-I data and new results herein that Max II is more variable than Max I. Therefore, Roche model fits for the TYC 01963-0488-1 LCs collected in 2015 were assessed with and without spots.

  12. Effect of specimen type on free immunoglobulin light chains analysis on the Roche Diagnostics cobas 8000 analyzer.

    Science.gov (United States)

    Nelson, Louis S; Steussy, Bryan; Morris, Cory S; Krasowski, Matthew D

    2015-01-01

    The measurement of free immunoglobulin light chains is typically performed on serum; however, the use of alternative specimen types has potential benefits. Using the Freelite™ kappa and lambda free light chains assay on a Roche Diagnostics cobas 8000 c502 analyzer, we compared three specimen types (serum, EDTA-plasma and lithium heparin plasma separator gel-plasma) on 100 patients. Using Deming regression and eliminating outliers (limiting data to light chain concentrations below 400 mg/L), the three specimen types showed comparable results for kappa light chain concentration, lambda light chain concentration, and kappa/lambda ratio with slopes close to 1.0 and y-intercepts close to zero. EDTA-plasma showed slightly more positive bias relative to serum than lithium heparin. Analysis using EDTA-plasma and lithium heparin plasma showed comparable linearity, precision, and temperature stability. A single sample showing hook effect (not in the comparison set) gave comparable results using either plasma specimen type. For the Freelite™ kappa and lambda free light chains assay, both EDTA-plasma or lithium heparin-plasma can serve as acceptable substitutes for serum, at least for the Roche cobas 8000 analyzer.

  13. O que motiva as equipas de vendas da indústria farmacêutica : o caso ROCHE

    OpenAIRE

    Barreto, Amílcar Ismael

    2013-01-01

    Projeto de Mestrado em Gestão O desenvolvimento de qualquer investigação pressupõe a existência de algo que nos inquieta e nos induz a curiosidade e este trabalho não constitui uma exceção. Assim sendo, formulou-se como principal objetivo de estudo: analisar o que motiva as equipas de vendas da Indústria Farmacêutica, utilizando o Caso da Roche. As principais questões de partida são: Quais os fatores intervenientes na motivação de um Delegado de Informação Médica? Qual é a hierarquizaçã...

  14. El teorema de Riemann-Roch y el morfismo de Gysin en geometría aritmética

    OpenAIRE

    Navarro Garmendia, Alberto

    2016-01-01

    Le th eor eme de Riemann-Roch originale a rme que pour tout morphisme propre f : Y ! X entre vari et es quasi-projectifs lisses sur un corps, et tout el ement a 2 K0(Y ) du groupe de Grothendieck des br es vectoriels on a ch(f!(a)) = f {u100000}Td(Tf ) ch(a) (cf. [BS58]). Ici ch est le caract ere de Chern, Td(Tf ) est la classe de Todd du br e tangent relative et f et f! sont les images directes de l'anneau de Chow et K0 respectivement. Apr es, Baum, Fulton et MacPherson ont d emontr e...

  15. THE QUASI-ROCHE LOBE OVERFLOW STATE IN THE EVOLUTION OF CLOSE BINARY SYSTEMS CONTAINING A RADIO PULSAR

    Energy Technology Data Exchange (ETDEWEB)

    Benvenuto, O. G.; De Vito, M. A. [Facultad de Ciencias Astronómicas y Geofísicas, Universidad Nacional de La Plata and Instituto de Astrofísica de La Plata (IALP), CCT-CONICET-UNLP. Paseo del Bosque S/N (B1900FWA), La Plata (Argentina); Horvath, J. E., E-mail: adevito@fcaglp.unlp.edu.ar, E-mail: foton@iag.usp.br [Instituto de Astronomia, Geofísica e Ciências Atmosféricas, Universidade de São Paulo R. do Matão 1226 (05508-090), Cidade Universitária, São Paulo SP (Brazil)

    2015-01-01

    We study the evolution of close binary systems formed by a normal (solar composition), intermediate-mass-donor star together with a neutron star. We consider models including irradiation feedback and evaporation. These nonstandard ingredients deeply modify the mass-transfer stages of these binaries. While models that neglect irradiation feedback undergo continuous, long-standing mass-transfer episodes, models including these effects suffer a number of cycles of mass transfer and detachment. During mass transfer, the systems should reveal themselves as low-mass X-ray binaries (LMXBs), whereas when they are detached they behave as binary radio pulsars. We show that at these stages irradiated models are in a Roche lobe overflow (RLOF) state or in a quasi-RLOF state. Quasi-RLOF stars have radii slightly smaller than their Roche lobes. Remarkably, these conditions are attained for an orbital period as well as donor mass values in the range corresponding to a family of binary radio pulsars known as ''redbacks''. Thus, redback companions should be quasi-RLOF stars. We show that the characteristics of the redback system PSR J1723-2837 are accounted for by these models. In each mass-transfer cycle these systems should switch from LMXB to binary radio pulsar states with a timescale of approximately one million years. However, there is recent and fast growing evidence of systems switching on far shorter, human timescales. This should be related to instabilities in the accretion disk surrounding the neutron star and/or radio ejection, still to be included in the model having the quasi-RLOF state as a general condition.

  16. Paleotectonic Settings for Petroleum Source Rocks Position paléolithique des roches mères

    Directory of Open Access Journals (Sweden)

    Curtis D. M.

    2006-10-01

    Full Text Available Petroleum source rocks have been deposited in a variety of paleotectonic and paleogeographic settings. The paleotectonic setting for a given source rock is, in many cases, different from the present tectonic setting of the basin in which the derived hydrocarbon accumulations are found. The quantity and type of hydrocarbons generated from a given source rock depend upon the quantity (richness, quality (kerogen type, and maturity (ability to generate hydrocarbons of the organic carbon in it. These three factors are strongly influenced by the paleotectonic setting of the basin in which a given source rock was deposited, as well as by its subsequent burial history (time-temperature history. The evolution of traps, on the other hand, depends upon the tectonic history of the basin during migration and entropment, and is closely related to the present tectonic setting ot the basin. Using a basin classification based on that of A. W. Bally and modified by K. Arbenz, I have attempted to related the distribution of hydrocarbon reserves in some of the major well-explored basins of the world to the paleotectonic settings for known or postulated source rocks in those basins. The principal basin categories defined are: cratonic, passive margin-related, aulacogenic. A-subduction-related, B-subduction-related, and strike-slip, transform-related. Preliminary results suggest that some of the best source rocks were deposited in aulacogenic and strike-slip/transform-related settings; some of the poorest were deposited in cratonic settings. Les roches mères de pétrole se sont déposées dans des sites paléotectoniques et paléogéographiques variés. La position paléotectonique d'une roche mère est dans de nombreux cas différente de la situation tectonique actuelle du bassin où l'on trouve les hydrocarbures qui en proviennent. La quantité et le type des hydrocarbures produits par une roche mère donnée dépendent de l'abondance (richesse, de la qualit

  17. Clinical performance of the new Roche COBAS (R) TaqMan HCV test and high pure system for extraction, detection and quantitation of HCV RNA in plasma and serum

    NARCIS (Netherlands)

    H.C. Gelderblom; S. Menting; M.G. Beld

    2006-01-01

    We evaluated the Roche COBAS (R) TaqMan HCV Test For Use With The High Pure System (TaqMan HPS; Roche Diagnostics), for the extraction, detection and quantitation of hepatitis C virus (HCV) RNA in serum or plasma of HCV-infected individuals. The TaqMan HPS is a real-time PCR assay with a reported li

  18. Testing single-grain quartz OSL methods using sediment samples with independent age control from the Bordes-Fitte rockshelter (Roches d'Abilly site, Central France)

    DEFF Research Database (Denmark)

    Thomsen, Kristina Jørkov; Murray, Andrew Sean; Buylaert, Jan-Pieter;

    2016-01-01

    We present quartz single-grain dose distributions for four well-bleached and unmixed sediment samples with independent age control (22–48 ka), from the archaeologically important Bordes-Fitte rockshelter at Roches d'Abilly, France. This site has previously been dated using 14C AMS dating and stan...

  19. Comparison of Roche MONITOR and Organon Teknika NucliSens assays to quantify human immunodeficiency virus type 1 RNA in cerebrospinal fluid.

    Science.gov (United States)

    Spearman, P; Fiscus, S A; Smith, R M; Shepard, R; Johnson, B; Nicotera, J; Harris, V L; Clough, L A; McKinsey, J; Haas, D W

    2001-04-01

    We compared Roche MONITOR and Organon Teknika NucliSens assays for human immunodeficiency virus type 1 (HIV-1) RNA in cerebrospinal fluid (CSF). Results of 282 assays were highly correlated (r = 0.826), with MONITOR values being 0.29 +/- 0.4 log(10) copies/ml (mean +/- standard deviation) values. Both assays can reliably quantify HIV-1 RNA in CSF.

  20. Performance of the Roche second generation hemoglobin A1c immunoassay in the presence of HB-S or HB-C traits.

    Science.gov (United States)

    Abadie, Jude M; Koelsch, Angela A

    2008-01-01

    Blood HbA1c determination is a powerful tool for the evaluation and management of patients with diabetes mellitus. Many HbA1c analytical methods demonstrate bias in samples from patients with hemoglobinopathies. This study evaluated the analytical performance of Roche Diagnostics' 1st and 2nd generation HbA1c assays in patients with or without hemoglobinopathies whose HbA1c levels were elevated or normal, respectively. Boronate-affinity high performance liquid chromatography (HPLC) served as the reference method. Whole blood samples were collected from 80 patients with HbS or HbC whose group mean HbA1c value was elevated and also from 80 patients without hemoglobinopathy whose HbA1c values were in the well-controlled range. Each sample was assayed for HbA1c by the Primus boronate-affinity HPLC technique and by Roche's 1st and 2nd generation immunoassays using a Cobas Integra 800 analytical system. Results by the HPLC technique were compared with the results of both Roche assays by linear regression and Bland-Altman analysis. The 1st and 2nd generation assays yielded regression lines and correlation values vs HPLC assay of y = 1.43x - 1.59; R(2) = 0.83, and y = 0.94x + 0.10; R(2) = 0.92, respectively, in the 80 patients with hemoglobinopathies. The mean difference and the +/-2SD range were greater in the 1st than in the 2nd generation assay (2.68, +/-2.07 vs -0.54, +/-0.86, respectively). The 2nd generation assay also showed better performance than the 1st generation assay in samples from the 80 patients without hemoglobinopathy. In conclusion, this study validates the accuracy of Roche's 2nd generation assay, which is substantially improved over Roche's 1st generation HbA1c assay.

  1. Verification of analytical measurement range of serum creatinine detected by Roche Cobas 501 Biochemistry Analyzer%Roche Cobas 501生化分析仪血清肌酐分析测量范围的验证

    Institute of Scientific and Technical Information of China (English)

    陈永传; 崔亚利; 李艳; 任飒爽

    2016-01-01

    目的:通过对血清肌酐分析测量范围(AMR)的验证,探讨临床实验室如何按照国际标准要求进行生化分析仪定量检测项目分析测量范围的验证,保证检验结果准确、可靠。方法采用酶法在Roche Cobas 501生化分析仪上检测7个浓度水平美国病理学家协会(CAP)线性范围能力测试样品,这7个样品靶值涵盖厂家说明书标示肌酐分析测量范围低、中、高值,每个样品检测两次取其均值,计算其与靶值的偏倚。另外参照美国临床和实验室标准协会(CLSI )指南文件 EP6‐P的要求,收集含高值肌酐的新鲜患者血清,按一定比例混合、离心,计算混合物的浓度并将之作为高值样品(H ),与经同样处理获得的低值样品(L )分别按5L、4L+1H、3L+2H、2L+3H、1L+4H、5H的关系配制,形成系列样品,在Roche Cobas 501生化分析仪上对各样品的肌酐进行检测,每个样品检测4次,数据进行回归分析。结果7个水平的CAP样品与靶值的偏倚均小于北京善方医院检验科设定的允许误差±7.5%[(1/2×TE)%]。新鲜患者混合血清样品回归方程为Y=0.9886X+16.614,b=0.9886,介于0.97~1.03,截距a与0经 t检验,ta< t0.05,P>0.05,说明截距与0无明显差异,回归直线事实上通过0点。结论厂家说明书标示的血清肌酐分析测量范围验证通过,实验室可以采用。%Objective To investigate how the clinical laboratory conducting the verification of analytical measurement range (AM R) of quantitative items detected by the biochemical analyzer according to the requirements of the international standards by verifying the serum creatinine AMR for ensuring the accuracy and reliability of detection results .Methods The enzyme method was adopted to detect the 7‐concentration levels test specimens of CAP linear range proficiency test on the Roche Cobas 501 biochemical

  2. Techniques used in high-scoring and low-scoring 'Roche' vaults performed by elite male gymnasts.

    Science.gov (United States)

    Takei, Yoshiaki; Dunn, J Hubert; Blucker, Erik

    2003-07-01

    The 16 highest-scored Roche vaults (G1) performed during the 2000 Olympic Games were compared with those receiving the 16 lowest-scores (G2). A 16-mm motion picture camera operating at 100 Hz recorded the vaults during the competition. The results of t tests (p vertical force and backward horizontal force exerted by the board, greater change in the vertical velocity while on the board, and greater vertical velocity at board take-off, (b) comparable linear and angular motions in pre-flight, (c) smaller backward horizontal impulse exerted by the horse, smaller loss of the horizontal velocity while on the horse, and greater horizontal and vertical velocities at horse take-off, (d) greater height and larger horizontal distance of post-flight, (e) higher body mass centre at knee release, and (f) higher mass centre, greater normalised moment of inertia, and smaller vertical velocity at mat touchdown. Therefore, gymnasts and coaches should focus on sprinting the approach; blocking and pushing-off the take-off board rapidly and vigorously; departing the board with a large vertical velocity; exerting large downward vertical force and small forward horizontal force from the hand-stand position while on the horse; departing the horse with large horizontal and vertical velocities; and completing the majority of the double salto forward near the peak of trajectory and releasing the knees above the top of the horse to prepare for a controlled landing.

  3. Near-complete genome sequencing of swine vesicular disease virus using the Roche GS FLX sequencing platform.

    Directory of Open Access Journals (Sweden)

    Sandra C Abel Nielsen

    Full Text Available Swine vesicular disease virus (SVDV is an enterovirus that is both genetically and antigenically closely related to human coxsackievirus B5 within the Picornaviridae family. SVDV is the causative agent of a highly contagious (though rarely fatal vesicular disease in pigs. We report a rapid method that is suitable for sequencing the complete protein-encoding sequences of SVDV isolates in which the RNA is relatively intact. The approach couples a single PCR amplification reaction, using only a single PCR primer set to amplify the near-complete SVDV genome, with deep-sequencing using a small fraction of the capacity of a Roche GS FLX sequencing platform. Sequences were initially verified through one of two criteria; either a match between a de novo assembly and a reference mapping, or a match between all of five different reference mappings performed against a fixed set of starting reference genomes with significant genetic distances within the same species of viruses. All reference mappings used an iterative method to avoid bias. Further verification was achieved through phylogenetic analysis against published SVDV genomes and additional Enterovirus B sequences. This approach allows high confidence in the obtained consensus sequences, as well as provides sufficiently high and evenly dispersed sequence coverage to allow future studies of intra-host variation.

  4. From Roche Vitamins to DSM Nutritional Products%从罗氏维生素到帝斯曼营养产品

    Institute of Scientific and Technical Information of China (English)

    2004-01-01

    In October 2003, the Dutch group DSM has acquired the Vitamins and Fine Chemicals business from Roche to create DSM Nutritional Products-one of the world's leading suppliers of vitamins and carotenoids for Animal Nutrition industry, the Food and Pharmaceutical industries as well as the Cosmetics industry by offering a wide range of products to help improve nutrition and prevent disease. In China market, B vitamins are provided by DSM Nutritional Products for food fortification.

  5. Neisseria gonorrhoeae False-Positive Result Obtained from a Pharyngeal Swab by Using the Roche cobas 4800 CT/NG Assay in New Zealand in 2012

    OpenAIRE

    Upton, Arlo; Bromhead, Collette; Whiley, David M

    2013-01-01

    The Roche cobas 4800 CT/NG assay is a commonly used commercial system for screening for Neisseria gonorrhoeae infection, and previous studies have shown the method to be highly sensitive and specific for urogenital samples. We present the first confirmed clinical N. gonorrhoeae false-positive result using the cobas 4800 NG assay, obtained from testing a pharyngeal swab sample and caused by cross-reaction with a commensal Neisseria strain.

  6. Contribution à l'étude de la "taille" des roches Contribution to the Study of Rock Cutting

    Directory of Open Access Journals (Sweden)

    Nguyenminh D.

    2006-11-01

    Full Text Available Une étude expérimentale détaillée du processus local de destruction des roches par un outil de forage pétrolier a été faite par une méthode de similitude utilisant des matériaux équivalents tendres. On examine l'influence de la forme de l'outil, de la rugosité du contact et de la ductilité e globale » du matériau. Les résultats obtenus sont ensuite comparés à ceux de l'analyse plastique par la théorie des charges limites. Cette étude met en évidence l'existence de deux modes de rupture, l'action différente du frottement superficiel selon le sens de l'écoulement relatif du matériau en contact, le phénomène de la ductilité apparente qui dépend de la forme de l'outil ; elle précise les paramètres mécaniques importants du forage. A detailed experimental investigation of the local process of rock cutting by a drill bit was carried out on soft equivalent materials simulating rock under borehole conditions. Different factors were analyzed : the shape of the bit tooth, the roughness of ifs contact area, the average ductility of the materiat. The results obtained are then compared with those from a plastic analysis based on the peak lood theory. This investigation shows that there are two different modes of rock destruction, that the Coulomb friction has a different effect depending on the relative direction of flow of the materiat in contact with the bit, and that an apparent ductility of the materiat is linked to the shape of the bit teeth. Finally, the basic mechanical variables for drilling are described

  7. Analysis of 16S rRNA amplicon sequencing options on the Roche/454 next-generation titanium sequencing platform.

    Directory of Open Access Journals (Sweden)

    Hideyuki Tamaki

    Full Text Available BACKGROUND: 16S rRNA gene pyrosequencing approach has revolutionized studies in microbial ecology. While primer selection and short read length can affect the resulting microbial community profile, little is known about the influence of pyrosequencing methods on the sequencing throughput and the outcome of microbial community analyses. The aim of this study is to compare differences in output, ease, and cost among three different amplicon pyrosequencing methods for the Roche/454 Titanium platform METHODOLOGY/PRINCIPAL FINDINGS: The following three pyrosequencing methods for 16S rRNA genes were selected in this study: Method-1 (standard method is the recommended method for bi-directional sequencing using the LIB-A kit; Method-2 is a new option designed in this study for unidirectional sequencing with the LIB-A kit; and Method-3 uses the LIB-L kit for unidirectional sequencing. In our comparison among these three methods using 10 different environmental samples, Method-2 and Method-3 produced 1.5-1.6 times more useable reads than the standard method (Method-1, after quality-based trimming, and did not compromise the outcome of microbial community analyses. Specifically, Method-3 is the most cost-effective unidirectional amplicon sequencing method as it provided the most reads and required the least effort in consumables management. CONCLUSIONS: Our findings clearly demonstrated that alternative pyrosequencing methods for 16S rRNA genes could drastically affect sequencing output (e.g. number of reads before and after trimming but have little effect on the outcomes of microbial community analysis. This finding is important for both researchers and sequencing facilities utilizing 16S rRNA gene pyrosequencing for microbial ecological studies.

  8. Multicenter comparison study of both analytical and clinical performance across 4 Roche HCV RNA assays utilizing different platforms.

    Science.gov (United States)

    Vermehren, Johannes; Stelzl, Evelyn; Maasoumy, Benjamin; Michel-Treil, Veronique; Berkowski, Caterina; Marins, Ed G; Paxinos, Ellen E; Marino, Enrique; Wedemeyer, Heiner; Sarrazin, Christoph; Kessler, Harald H

    2017-01-25

    Antiviral treatment efficacy for chronic HCV infection is determined based on measurement of HCV RNA at specific time points throughout therapy by highly sensitive and accurate HCV RNA assays. This study evaluated the performance of two recently-developed real-time PCR HCV RNA assays, the cobas HCV for use on the cobas 6800/8800 systems (cobas 6800/8800 HCV) and the cobas HCV for use on the cobas 4800 system (cobas 4800 HCV) in comparison to two established assays, the COBAS AmpliPrep/COBAS TaqMan HCV Quantitative Test, version 2.0 (CAP/CTM v2) and the COBAS TaqMan HCV Test, version 2.0 for use with the High Pure System (HPS/CTM v2). Limit of detection (LOD) and linearity at lower concentrations (5-1000 IU/mL) were assessed for cobas 6800/8800 HCV and cobas 4800 HCV using WHO standard traceable panels representing HCV genotypes (GT) 1-4. Pairwise assay comparisons were also performed using 245 clinical samples representing HCV GT 1-4.cobas 6800/8800 HCV and cobas 4800 HCV were linear at low HCV RNA concentrations (<0.3 log10 IU/mL difference between expected and observed results) with LOD of 8.2 IU/mL and 11.7 IU/mL, respectively, for GT1. The new assays showed excellent agreement with CAP/CTM v2 and HPS/CTM v2 results in samples with quantifiable viral load. Concordance across the 6 million IU/mL cutoff was high among all four assays (90-94%). In conclusion, both cobas 6800/8800 HCV and cobas 4800 HCV tests are sensitive and linear, and correlate well with established Roche assays used in clinical practice.

  9. Performance evaluation of the new Roche cobas AmpliPrep/cobas TaqMan HCV test, version 2.0, for detection and quantification of hepatitis C virus RNA

    NARCIS (Netherlands)

    S.D. Pas (Suzan); R. Molenkamp (Richard); J. Schinkel (Janke); S. Rebers; C. Copra (Cederick); S. Seven-Deniz; D. Thamke (Diana); R.J. de Knegt (Robert); B.L. Haagmans (Bart); M. Schutten (Martin)

    2013-01-01

    textabstractTo evaluate the analytical performance and explore the clinical applicability of the new Roche cobas AmpliPrep/cobas TaqMan HCV test, v2.0 (CAP/CTM v2.0), a platform comparison was performed on panels and diagnostic samples with the Roche cobas AmpliPrep/cobas TaqMan HCV test (CAP/CTM v1

  10. Alteration hydrothermale et deformation ductile des roches volcaniques acides associees au gisement sulfure de draa sfar (Jebilet Centrales, Maroc

    Directory of Open Access Journals (Sweden)

    Zinbi, Y.

    2005-12-01

    Full Text Available The volcanics and volcanoclastic rocks of Draa Sfar (Central Jebilet, Moroccan hercynian belt are affected by ductile stress and hydrothermal alteration accompanied by a weak degree of metamorphism (greenschist facies. Some N-S oriented shearing zones, affect locally these formations while being the site of an important hydrothermal activity. The consequences of these transformations from a non to slightly- deformed rhyodacite, show that through these ductile shearing zones: (1 the mineralogical assemblage of hydrothermal alteration is essentially formed by chlorite, sericite, quartz and magnetite; (2 the gradual increase of the alteration indexes is accompanied by the destruction of the phenocrists and the recrystallization of the matrix by phyllosilicates and quartz; (3 the progressive transfer of material is more intense in the more deformed zones where the values of Ti, Al and Zr remain constant. These shearing zones played a very important role in the circulation of fluids and the transformation of the rhyodacite of Draa Sfar.Les roches volcaniques et volcanoclastiques de Draa Sfar (Jebilet centrales, Maroc hercynien sont affectées par une déformation ductile accompagnée d’un métamorphisme de faible degré (faciès schistes verts et d’une altération hydrothermale. Des zones de cisaillement de direction N-S, ont affecté localement ces formations tout en étant vecteurs d’une importante activité hydrothermale. Le suivi de ces transformations à partir de la rhyodacite non ou peu déformée, montre qu’à travers ces zones de cisaillements ductiles : (1 l’assemblage minéralogique d’altération hydrothermale est formé essentiellement de chlorite, de séricite, de quartz et de magnétite ; (2 l’augmentation graduelle des indices d’altération s’exprime par la destruction des phénocristaux au profit d’une matrice recristallisée en phyllosilicates et quartz ; (3 le transfert progressif de la matière est plus intense

  11. CCD Photometry, Roche Modeling and Evolutionary History of the WUMa-type Eclipsing Binary TYC01664-0110-1

    Science.gov (United States)

    Alton, K. B.; Stępień, K.

    2016-09-01

    TYC 01664-0110-1 (ASAS J212915+1604.9), a W UMa-type variable system (P=0.282962 d), was first detected over 17 years ago by the ROTSE-I telescope. Photometric data (B, V and Ic) collected at UnderOak Observatory (UO) resulted in five new times-of-minima for this variable star which were used to establish a revised linear ephemeris. No published radial velocity (RV) data are available for this system. However, since this W UMa binary undergoes a total eclipse, Roche modeling based on the Wilson-Devinney (W-D) code yielded a well-constrained photometric value for M2/M1 (q=0.356±0.001). There is a suggestion from ROTSE-I (1999) and ASAS survey data (2003, 2005, and 2008) that the secondary maximum is more variable than the primary one probably due to the so-called O'Connell effect. However, peak asymmetry in light curves (LC) from 2015 was barely evident during quadrature. Therefore, W-D model fits of these most recent data did not yield any substantive improvement with the addition of spot(s). Using the evolutionary model of cool close binaries we searched for a possible progenitor of TYC 01664-0110-1. The best fit is obtained if the initial binary has an orbital period between 3.3-3.8 d and component masses between 1.0-1.1 M⊙ and 0.30-0.35 M⊙. The model progenitor needs about 10 Gyr to attain the presently observed parameters of the variable. Its period slowly increases and the mass ratio decreases. According to the model predictions TYC 01664-0110-1 will go through the common envelope (CE) phase in the future, followed by merging of both components or formation of a double degenerate. Due to its apparent brightness (mV,max≍10.9 mag) and unique properties, the star is an excellent target for spectroscopic investigation of any possible deviations from a simple static model of a contact binary.

  12. Gyrotropy and Anisotropy of Rocks: Similarities and Differences Gyrotropie et anisotropie des roches : similitudes et différences

    Directory of Open Access Journals (Sweden)

    Chichinina T. I.

    2006-12-01

    Full Text Available The main features of wave propagation in gyrotropic media are compared with wave propagation in anisotropic media. The results of numerical modelling are presented for three typical seismic exploration models. The first two models are azimuthally anisotropic media (of orthorombic symmetry system, group 2m without and with gyration. The third model is a gyrotropic transversely isotropic medium with a vertical symmetry axis. The computations have been made for propagation of shear waves along the vertical symmetry axis. For sufficiently short wave paths (in our models less than 400 m the two-component (x, y seismograms are similar for all three models. For longer paths both signal shape and signal duration for the first and the third model differ noticeably. Some evidence (experimental data and a micromodel is given to show that the gyrotropy of rocks does exist or, at least, can exist. Les principales caractéristiques de la propagation des ondes dans les milieux gyrotropes sont comparées avec la propagation des ondes dans les milieux azimutalement anisotropes. Les résultats d'une modélisation numérique sont présentés pour trois modèles caractéristiques d'exploration sismique. Les deux premiers modèles sont des milieux anisotropes (de symétrie orthorhombique, groupe 2m avec et sans gyrotropie. Le troisième modèle est un milieu gyrotrope transverse isotrope avec un axe de symétrie vertical. Ces calculs ont été réalisés pour la propagation des ondes transversales le long de l'axe de symétrie vertical. Pour des trajets sismiques suffisamment courts (pour nos modèles, moins de 400 m, les sismogrammes à deux composantes (x, y sont similaires pour les trois modèles. Pour des trajets plus longs, la forme et la durée du signal diffèrent sensiblement pour les modèles 1 et 3. Ceci a pour but de montrer (à l'aide des données expérimentales et d'un micromodèle que la gyrotropie dans les roches existe, ou, tout au moins, peut

  13. Aprovechamiento del salto de Bourg-Lés-Valence. La Presa de la Roche de Glun-Drôme – Francia

    Directory of Open Access Journals (Sweden)

    Française d´Enterprise, Compagnie

    1971-05-01

    Full Text Available To take the fullest advantage of the hydroelectric and agricultural usefulness of the Rhône, the Compagnie Nationale du Rhône has divided the river into a number of sections, and these have been separately developed. The hydraulic gradient at La Roche de Glun, at the end of the central section, involves a hydraulic system consisting of a reservoir, a dam and dykes, a canal, a power station, an overflow canal and drainage works in the , surrounding zones. This project has been carried out by the Compagnie Française d'Enterprises.Para explotar al máximo las posibilidades hidroeléctricas y agrícolas del Ródano, la Compagnie Nationale du Rhône ha dividido dicho río en una serie de tramos para proceder a su distribución. El salto de La Roche de Glun, último del tramo central, forma un complejo hidráulico que consta de: un embalse cerrado por diques, una presa, un canal de alimentación, una central, una esclusa, un canal de descarga y unas obras anejas de drenaje para evitar inundaciones en las ciudades próximas. Las obras han sido realizadas por la Compagnie Française d'Entreprises.

  14. Method comparison of the Ortho Vitros Fusion 5,1 chemistry analyzer and the Roche COBAS Integra 400 for urine drug screen testing in the emergency department.

    Science.gov (United States)

    Johnson-Davis, Kamisha L; Thompson, Catherine D; Clark, Chantry J; McMillin, Gwen A; Lehman, Christopher M

    2012-06-01

    Exposure to drugs and toxins is a major cause for the rising number of emergency department visits each year. Immunoassays are commonly used in the emergency department to provide rapid turnaround time for acute care. The purpose of this study was to compare two automated immunoassay chemistry analyzers to determine which platform produced the fewest number of false positive/negative results. Residual patient urine samples were were collected for each of the following drugs/drug classes: cocaine (n = 40), opiates (n = 45), and amphetamines (n = 54) and confirmed either positive or negative by mass spectrometry. Split sample analyses of these specimens were performed on both the Roche COBAS INTEGRA 400 plus and Ortho Vitros 5,1 FS instruments. The results from the two chemistry analyzers were compared to confirmed results. Both immunoassays were prone to false positive results for cocaine and false negative results for opiates and amphetamines. The Vitros Fusion analyzer generated fewer false positive and false negative results for opiate and amphetamine testing than the Roche Integra, but the platforms performed comparably for cocaine.

  15. Une nouvelle caractérisation des fondations rocheuses pour une meilleure approche de la résistance au cisaillement d'une interface béton-roche

    OpenAIRE

    MOUZANNAR, Hussein; BOST, Marion; JOFFRIN, Patrick

    2015-01-01

    La construction d'un barrage-poids sur une fondation rocheuse nécessite une justification de la stabilité vis-à-vis du glissement à l'interface entre béton et roche. Or les nombreuses recherches sur le comportement au cisaillement d'une discontinuité rocheuse ont mis en évidence que le comportement dépend en partie de la morphologie de la surface rocheuse. L'étude du comportement au cisaillement d'une interface béton-roche doit donc comprendre la caractérisation de la rugosité de la surface r...

  16. Disponibilité du nickel dans les sols développés sur roches ultramafiques de Nouvelle-Calédonie

    OpenAIRE

    Becquer,Thierry; Bourdon, Emmanuel; L'HUILLIER, LAURENT

    1997-01-01

    Les sols développés sur les roches ultramafiques de Nouvelle-Calédonie contiennent des teneurs très élevées en nickel (environ 1% de NiO) susceptibles d'induire une toxicité lors de leur mise en valeur agricole. Une étude visant à évaluer la disponibilité du nickel dans ces sols a donc été réalisée sur une toposéquence comprenant les principaux faciès de sols utilisables pour l'agriculture. Des extractions chimiques par KCl 1M et DTPA 0,005 M + CaCl2 0,01 M à pH 5,3 ont été effectuées sur les...

  17. Field evaluation of Abbott Real Time HIV-1 Qualitative test for early infant diagnosis using dried blood spots samples in comparison to Roche COBAS Ampliprep/COBAS TaqMan HIV-1 Qual test in Kenya.

    Science.gov (United States)

    Chang, Joy; Omuomo, Kenneth; Anyango, Emily; Kingwara, Leonard; Basiye, Frank; Morwabe, Alex; Shanmugam, Vedapuri; Nguyen, Shon; Sabatier, Jennifer; Zeh, Clement; Ellenberger, Dennis

    2014-08-01

    Timely diagnosis and treatment of infants infected with HIV are critical for reducing infant mortality. High-throughput automated diagnostic tests like Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 Qual Test (Roche CAPCTM Qual) and the Abbott Real Time HIV-1 Qualitative (Abbott Qualitative) can be used to rapidly expand early infant diagnosis testing services. In this study, the performance characteristics of the Abbott Qualitative were evaluated using two hundred dried blood spots (DBS) samples (100 HIV-1 positive and 100 HIV-1 negative) collected from infants attending the antenatal facilities in Kisumu, Kenya. The Abbott Qualitative results were compared to the diagnostic testing completed using the Roche CAPCTM Qual in Kenya. The sensitivity and specificity of the Abbott Qualitative were 99.0% (95% CI: 95.0-100.0) and 100.0% (95% CI: 96.0-100.0), respectively, and the overall reproducibility was 98.0% (95% CI: 86.0-100.0). The limits of detection for the Abbott Qualitative and Roche CAPCTM Qual were 56.5 and 6.9copies/mL at 95% CIs (p=0.005), respectively. The study findings demonstrate that the Abbott Qualitative test is a practical option for timely diagnosis of HIV in infants.

  18. Diffusion Properties of Carbonated Caprocks from the Paris Basin Propriétés diffusives de roches de couverture carbonatées du Bassin de Paris

    Directory of Open Access Journals (Sweden)

    Berne P.

    2009-11-01

    carbonated caprocks (regardless of the problem of alteration by acidified water, not addressed here. Lastly, a few simple rules for extending the results presented here to other experimental conditions are proposed. L’efficacite d’un stockage geologique de CO2 repose sur les proprietes de confinement des roches de couverture. Parmi ces proprietes, les caracteristiques diffusives jouent un role important qui est parfois sous-estime. En effet, la diffusion est un processus lent mais qui peut s’averer non negligeable sur le long terme. De plus, les caracteristiques recherchees pour une roche de couverture, principalement une forte pression d’entree et une faible permeabilite, ne sont pas incompatibles avec des coefficients de diffusion relativement eleves, puisque ces grandeurs sont liees a des caracteristiques geometriques differentes (schematiquement, les tailles de pore pour les unes et la tortuosite pour les autres. Dans le cadre du projet Geocarbone–INTEGRITE, finance par l’ANR de 2006 a 2008, on a donc mesure les coefficients de diffusion de l’eau et de l’ion bicarbonate dans des echantillons de roche de couvertures carbonatees provenant de trois niveaux (formations des Calcaires du Comblanchien et de la Dalle Nacree. Ces deux especes permettent en effet de couvrir, en premiere approximation, les situations rencontrees en conditions de stockage (espece neutre/espece chargee, interagissant ou non avec la matrice solide. Dans un premier temps, on presente le modele simple de diffusion utilise pour le depouillement des experiences, ce qui permet de passer en revue les differentes grandeurs utiles : coefficient de diffusion effectif, coefficient de diffusion de pore, coefficient de diffusion apparent, porosite accessible, facteur de retard. Le coefficient d’autodiffusion de l’eau est mesure par deux techniques differentes (Resonance Magnetique Nucleaire et tracage radioactif a l’eau tritiee 1H3HO dans deux echantillons. Les resultats obtenus sont

  19. The Bolivian Source Rocks. Sub Andean Zone. Madre de Dios. Chaco Les roches mères de Bolivie. Subandin. Madre de Dios. Chaco

    Directory of Open Access Journals (Sweden)

    Diaz Martinez E.

    2006-11-01

    connaissances sur les roches mères de Bolivie. Ce travail a été fait dans le cadre de la convention de coopération qui lie depuis 1987 YPFB et l'ORSTOM - Institut Français de Recherche Scientifique pour le Développement en Coopération. L'établissement de cette base de données a permis une synthèse du potentiel pétrolier du pays, la partie concernant le bassin de Madre de Dios, la zone subandine et le Chaco, c'est-à-dire toute la zone potentiellement pétrolière du pays, hors Altiplano, est ici présentée. La base contient actuellement les analyses d'un peu plus de 3000 échantillons. Les roches mères sont Paléozoïques et se sont déposées dans un contexte de bassin d'avant-pays; celui ci s'étendait sur la cordillère ainsi que sur l'avant-pays actuel du Silurien au Permien. Le bassin, restreint initialement à la zone sud-ouest, s'est ensuite étendu vers le nord. La bordure ouest n'est pas connue, elle devait se situer au niveau de l'Altiplano actuel. La bordure est correspond au bouclier Brésilien affleurant actuellement à l'est du pays et sur laquelle se biseaute le Paléozoique. La sédimentation est marine, il s'agit d'une plate-forme carbonatée s'approfondissant au Carbonifère. De nombreuses évidences de diamectites et de figures de resédimentation ont été notées à partir de la fin du Dévonien. Le Trias marque la fin de ces dépôts et se caractérise par une érosion, sans doute due à une phase de rifting avortée. La sédimentation Jurassique et Crétacée est presque toujours continentale et souvent éolienne, il n'y a pas de structuration marquée. Au nord, dans la zone de Madidi, les dépôts du Crétacé terminal (Maestrichian montrent des intercalations marines riches en matière organique (Fm Flora, alors que son équivalent au centre et au Sud (Fm Cajones est purement gréseux. Le soulèvement de la cordillère orientale démarre à la fin de l'Oligocène (27 Ma, Sempere et al. , 1990 et le front de compression se déplace ensuite

  20. Un habitat orné en abri sous-roche au Magdalénien Moyen, Angles-sur-l'Anglin (Vienne, France

    Directory of Open Access Journals (Sweden)

    Iakovleva, Ludmila

    1999-06-01

    Full Text Available Not Available.

    [fr] L'originalité du site du Roc-aux-Sorciers à Angles-sur l´Anglin dans la Vienne (France se traduit par la présence d'un art pariétal magdalénien sculpté dont une partie, disposée sur la paroi du fond de l'abri sous roche, forme une frise sur près de 18 mètres de long. L´ étude, tant thématique que technique ou stylistique, de cet art pariétal in situ démontre une organisation et une construction dans ce complexe figuratif sculpté. Les sujets, aussi bien dans leur traitement que dans leur rendu, répondent à des règles précises propres au site d'Angles. Ils se regroupent par espèce en s'associant à d'autres sujets animaliers ou humains dans des espaces nettement délimités formant ainsi une composition sculptée. Des zones figuratives rassemblant plusieurs de ces compositions sculptées assimilées à des "panneaux", sont mises en relation avec le positionnement de grands foyers installés sur la roche-mère. Cette analyse nous amène à mettre en valeur une structure complexe d'habitat en liaison avec cette frise pariétale. [es] Un hábitat decorado del Magdaleniense Medio en el abrigo de Angles-sur-l'Anglin (Vienne, France. La originalidad del yacimiento de Roc-aux-Sorciers en Angles-sur-l 'Anglin, en Vienne (Francia, se debe a la existencia de un arte parietal magdaleniense esculpido del que una parte, situada en la pared del fondo del abrigo, forma un friso de 18 m. de largo, aproximadamente. El estudio, tanto temático como técnico o estilístico, de este arte parietal in situ demuestra una organización en este complejo figurativo esculpido. Las figuras, tanto en su tratamiento como en su expresión, responden a reglas precisas, propias del yacimiento de Angles. Se agrupan por especies, asociándose a otras figuras animales o humanas, en unos espacios estrictamente limitados, formando así una composición esculpida. Las zonas figurativas que integran muchas de estas

  1. Comparison of GMT presto assay and Roche cobas® 4800 CT/NG assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in dry swabs.

    Science.gov (United States)

    de Waaij, Dewi J; Dubbink, Jan Henk; Peters, Remco P H; Ouburg, Sander; Morré, Servaas A

    2015-11-01

    Urogenital Chlamydia trachomatis (CT) and Neisseria gonorrhoeae (NG) are the most prevalent bacterial STIs worldwide. Molecular tests are the standard for the detection of CT and NG, as these are difficult to culture. The recently introduced CE-IVD marked GMT Presto assay promises to be a valuable addition in CT and NG diagnostics. The advantage of the Presto assay is that it works on many PCR systems and the DNA can be isolated by any system.We compared the Presto assay to the widely used Roche cobas® 4800 CT/NG test for the detection of CT and NG in 612 vaginal and rectal dry collected swabs. Discrepant samples were tested by the TIB MOLBIOL Lightmix Kit 480 HT CT/NG assay. The alloyed gold standard was defined as two concurring Presto and cobas® 4800 results, or, with discrepant Presto and cobas® results, two concurring results of either test together with the Lightmix Kit 480 HT CT/NG assay. For the Presto assay,we observed 77 CT positive (13%) and 22 NG positive (3,6%) vaginal samples, and 41 CT positive (6,7%) and 11 NG positive (1,8%) rectal samples. For the cobas® 4800 assay,we observed 77 CT positive (13%) and 21NG positive (3,4%) vaginal samples, and 39 CT positive (6,4%) and 11 NG positive (1,8%) rectal samples. Ten CT samples were discrepant between Presto and cobas® 4800 CT/NG assays, while two NG samples were discrepant. CT sensitivity in both assays was 100% compared to the alloyed gold standard. The sensitivity was 100% for both vaginal and rectal dry swabs, underlining the suitability of these sample types for detection of CT and NG. The Presto assay is therefore valuable for molecular detection of CT and NG in dry vaginal and rectal swabs.

  2. Roche/BIOTECON Diagnostics LightCycler foodproof L. monocytogenes detection kit in combination with ShortPrep foodproof II Kit. Performance-Tested Method 070401.

    Science.gov (United States)

    Junge, Benjamin; Berghof-Jäger, Kornelia

    2006-01-01

    A method was developed for the detection of L. monocytogenes in food based on real-time polymerase chain reaction (PCR). This advanced PCR method was designed to reduce the time needed to achieve results from PCR reactions and to enable the user to monitor the amplification of the PCR product simultaneously, in real-time. After DNA isolation using the Roche/BIOTECON Diagnostics ShortPrep foodproof II Kit (formerly called Listeria ShortPrep Kit) designed for the rapid preparation of L. monocytogenes DNA for direct use in PCR, the real-time detection of L. monocytogenes DNA is performed by using the Roche/BIOTECON Diagnostics LightCycler foodproof L. monocytogenes Detection Kit. This kit provides primers and hybridization probes for sequence-specific detection, convenient premixed reagents, and different controls for reliable interpretation of results. For repeatability studies, 20 different foods, covering the 15 food groups recommended from the AOAC Research Institute (AOAC RI) for L. monocytogenes detection were analyzed: raw meats, fresh produce/vegetables, processed meats, seafood, egg and egg products, dairy (cultured/noncultured), spices, dry foods, fruit/juices, uncooked pasta, nuts, confectionery, pet food, food dyes and colorings, and miscellaneous. From each food 20, samples were inoculated with a low level (1-10 colony-forming units (CFU)/25 g) and 20 samples with a high level (10-50 CFU/25 g) of L. monocytogenes. Additionally, 5 uninoculated samples were prepared from each food. The food samples were examined with the test kits and in correlation with the cultural methods according to U.S. Food and Drug Administration (FDA) Bacteriological Analytical Manual (BAM) or U.S. Department of Agriculture (USDA)/Food Safety and Inspection Service (FSIS) Microbiology Laboratory Guidebook. After 48 h of incubation, the PCR method in all cases showed equal or better results than the reference cultural FDA/BAM or USDA/FSIS methods. Fifteen out of 20 tested food types

  3. 罗氏尿微量清蛋白检测试剂盒性能评价%Performance evaluation on Roche urine trace albumin detection reagent kit

    Institute of Scientific and Technical Information of China (English)

    黄勤烽; 黄少铃; 王美珠; 陈敏

    2016-01-01

    Objective To evaluate the detection performance of the cobas8000 c702 fully automatic biochemical analyzer for de‐tecting the second generation Roche urine trace albumin (ALBU2) .Methods (1) The precise evaluation :with the allowable error stipulated by CLIA 88 as the basis ,the requirements were the repeat precision <1/4TEa ,and intermediate precision <1/3TEa;(2) the linear range and the evaluation of the reportable range :the EP6‐A scheme was adopted ,and extend to calculate the average re‐covery rate of dilution ,the clinical reportable range was evaluated by the average dilution recovery of 90% -110% ;(3) the carry o‐ver pollution assessment :the carry over pollution of serum albumin on urine trace albumin detection was evaluated by the judgment standard of carry over pollution rate of 0 .5% ;(4)the methodological comparative analysis :with SIEMENS BN Ⅱas the reference system ,the Roche Cobas 8000 C702 and the BN2 results were performed the correlation contrastive analysis .Results The repeat precision :low concentration CV=1 .98% .high concentration CV=1 .64% ;intermediate precision :low concentration CV=4 .35% , high concentration CV=1 .20% ;the linear range verification :the measurement range 5 .6-413 .55 mg/L ;clinical reportable range :in the maximum diluted multiples of 30 times ,the clinical reportable range was 5 .6-12 406 .5 mg/L ;the carry over pollution rate :serum albumin (42 .6 g/L) on urine trace albumin(6 .9 mg/L) ,the carry over pollution rate was 0 .28% ;the indoor comparison :in the concentration within 200 mg/L ,the regression line was Y=0 .896 X+5 .049 ,the correlation coefficient r2 =0 .994 4 ,the system shift was passed at the medical decision level .When the specimen concentration within 201-413 .55 mg/L ,the regression line was Y=0 .848X-10 .44 ,the correlation coefficient r2 =0 .917 ,the system shift was not passed at the medical decision level .Conclusion The detection of the Roche ALBU2 in the Cobas 8000 C702 platform can

  4. Les roches basiques des boutonnieres d'Agadir melloul et d'Iguerda - taifast : tkmoins de l’histoire preorogenique de la chaine panafricaine de l’Anti-Atlas (Maroc

    Directory of Open Access Journals (Sweden)

    El Aouli, E. H.

    2004-04-01

    Full Text Available Dans les boutonnières précambriennes d'Agadir Melloul et d'Iguerda-Taïfast (Anti-Atlas central, les roches basiques du Néoprotérozoïque (PII sont représentées par des dykes et des corps basiques intrusifs dans le socle paléoprotérozoïque (PI et les quartzites du PII. L’ensemble PI, PII et roches basiques est affecté par la schistosité régionale panafricaine. Les éléments en traces, réputés peu mobiles au cours des processus d'altération et de métamorphisme (Nb, Y, Zr, Ti, V et les terres rares ont permis de subdiviser ces roches basiques en deux groupes: un groupe tholeiitique et un groupe transitionnel. Le cadre géodynamique de mise en place de ces roches pourrait être lié à un contexte distensif marquant le rifting pré-panafricain en relation avec l’ouverture océanique reconnue dans la boutonnière de Bou Azzer-El Grara et dans le massif de Siroua.En los complejos precámbricos de Agadir Melloul y de Iguarda-Taifast (Anti-Atlas centro, las rocas básicas del Neoproterozoico (PII están representadas por diques y cuerpos básicos intmsivos en el zócalo Paleoproterozoico (PI y las cuarcitas del PII. El conjunto PI, PII y las rocas básicas está afectado por la esquistosidad regional panafricana. Los elementos traza incompatibles, poco móviles en el transcurso de procesos de alteración y de metamorfismo (Nb, Y, Zr, Ti, V, así como las tierras raras, permiten subdividir estas rocas básicas en dos grupos: un grupo toleítico y otro transicional. El marco geodinámico de la intrusion de estas rocas podria estar ligado a un contexto extensional asociado al rifting pre-panafricano en relación con la apertura oceánica reconocida en el complejo de Bou Azzer-El Graara y en el macizo de Siroua.

  5. Gamma-emissions of some meteorites and terrestrial rocks. Evaluation of lunar soil radioactivity; Emissions gamma de quelques meteorites et roches terrestres. Evaluation de la radioactivite du sol lunaire

    Energy Technology Data Exchange (ETDEWEB)

    Nordemann, D. [Commissariat a l' Energie Atomique, Centre d' Etudes Nucleaires de Saclay, 91 - Gif-sur-Yvette (France)

    1966-07-01

    The gamma-emissions of some terrestrial rocks and of the following meteorites: Bogou, Eagle-Station, Granes, and Dosso were studied by quantitative low background gamma spectrometry. These measurements and their interpretation lead to the evaluation of the possible gamma-emissions of several models of lunar soils. (author) [French] Les emissions gamma des meteorites Bogou, Eagle-Station, Granes et Dosso et de quelques roches terrestres ont ete etudiees par spectrometrie gamma quantitative a faible mouvement propre. Ces mesures et leur interpretation permettent d'evaluer les principales contributions des emissions gamma du sol lunaire pour des modeles de compositions possibles variees. (auteur)

  6. Diagnosis of genital Chlamydia trachomatis infections in asymptomatic males by testing urine by PCR.

    OpenAIRE

    Domeika, M; Bassiri, M; Mårdh, P A

    1994-01-01

    An enzyme-linked immunosorbent assay (EIA) (MikroTrak; Syva) was compared with PCR (Amplicor; Roche) for detection of Chlamydia trachomatis in first-void urine (FVU) from 184 men attending a skin and venereal disease clinic. The prevalence of C. trachomatis in the population studied was 18.5%. Discrepant results between Syva EIA and Roche PCR were retested by using major outer membrane protein primer-based PCR. After retesting, the sensitivity, the specificity, and the positive and negative p...

  7. Total vitamin D assay comparison of the Roche Diagnostics "Vitamin D total" electrochemiluminescence protein binding assay with the Chromsystems HPLC method in a population with both D2 and D3 forms of vitamin D.

    Science.gov (United States)

    Abdel-Wareth, Laila; Haq, Afrozul; Turner, Andrew; Khan, Shoukat; Salem, Arwa; Mustafa, Faten; Hussein, Nafiz; Pallinalakam, Fasila; Grundy, Louisa; Patras, Gemma; Rajah, Jaishen

    2013-03-22

    This study compared two methods of assaying the 25-hydroxylated metabolites of cholecalciferol (vitamin D3) and ergocalciferol (vitamin D2). A fully automated electrochemiluminescence assay from Roche Diagnostics and an HPLC based method from Chromsystems were used to measure vitamin D levels in surplus sera from 96 individuals, where the majority has the D2 form of the vitamin. Deming regression, concordance rate, correlation and Altman Bland agreement were performed. Seventy two subjects (75%) had a D2 concentration >10 nmol/L while the remaining twenty four subjects had vitamin D2 concentration of less than 10 nmol/L by HPLC. Overall, the Roche Diagnostics method showed a negative bias of -2.59 ± 4.11 nmol/L on the e602 as compared to the HPLC with a concordance rate of 84%. The concordance rate was 91% in samples with D2 of less than 10 nmol/L and 82% in those with D2 concentration >10 nmol/L. The overall correlation had an r value of 0.77. The r value was higher in samples with D2 levels of less than 10 nmol/L, r = 0.96, as compared to those with D2 values of greater than 10 nmol/L, r = 0.74. The observed bias had little impact on clinical decision and therefore is clinically acceptable.

  8. Total Vitamin D Assay Comparison of the Roche Diagnostics “Vitamin D Total” Electrochemiluminescence Protein Binding Assay with the Chromsystems HPLC Method in a Population with both D2 and D3 forms of Vitamin D

    Directory of Open Access Journals (Sweden)

    Gemma Patras

    2013-03-01

    Full Text Available This study compared two methods of assaying the 25-hydroxylated metabolites of cholecalciferol (vitamin D3 and ergocalciferol (vitamin D2. A fully automated electrochemiluminescence assay from Roche Diagnostics and an HPLC based method from Chromsystems were used to measure vitamin D levels in surplus sera from 96 individuals, where the majority has the D2 form of the vitamin. Deming regression, concordance rate, correlation and Altman Bland agreement were performed. Seventy two subjects (75% had a D2 concentration >10 nmol/L while the remaining twenty four subjects had vitamin D2 concentration of less than 10 nmol/L by HPLC. Overall, the Roche Diagnostics method showed a negative bias of −2.59 ± 4.11 nmol/L on the e602 as compared to the HPLC with a concordance rate of 84%. The concordance rate was 91% in samples with D2 of less than 10 nmol/L and 82% in those with D2 concentration >10 nmol/L. The overall correlation had an r value of 0.77. The r value was higher in samples with D2 levels of less than 10 nmol/L, r = 0.96, as compared to those with D2 values of greater than 10 nmol/L, r = 0.74. The observed bias had little impact on clinical decision and therefore is clinically acceptable.

  9. Application de la chromatographie sur couche mince à l'étude quantitative et qualitative des extraits de roches et des huiles Application of Thin-Layer Chromatography to the Quantitative and Qualitative Analysis of Rock and Oil Extracts

    Directory of Open Access Journals (Sweden)

    Huc A. Y.

    2006-11-01

    Full Text Available La technique développée ici répond à un besoin de miniaturisation des analyses des huiles et des extraits de roche. La chromatographie sur couche mince permet en effet l'analyse qualitative et quantitative de faibles quantités d'échantillons. On peut grace à cette méthode étudier les extraits obtenus à partir des cuttings (5 à 10 g de roche. Nous nous sommes attachés à faire une étude critique de l'information obtenue et de comparer cette dernière aux résultats fournis par les autres méthodes analytiques (chromatographie liquide. The technique described here meets the need to miniaturize analyses of ails and rock extracts. Thin-layer chromatography tan be used for the qualitative and quantitative analysis of small amounts of samples. This method is capable of onalyzing extracts from cuttings (5 ta 10 g of rock. This article attempts to make a critical study of the information obtained and to compare il with results using other analytical methods (liquid chromatography.

  10. Analyse géochimique de la matiére organique extraite des roches sédimentaires. IV. Extraction des roches en faible quantités Geochemical Analysis of Organic Matter Extracted from Sedimentary Rocks Iv. Exraction from Small Amounts of Rock

    Directory of Open Access Journals (Sweden)

    Monin J. C.

    2006-11-01

    Full Text Available L'extraction en Soxhlet est inappllcable lorsque les échantillons de roche sont de trop petite taille. A l'occasion de la mise au point du protocole d'extraction correspondant, on examine l'influence d'un certain nombre de conditions opératoires sur le rendement d'extraction : température, durée nature et quantité du solvant, présence de lumière, présence d'air, procédé d'extraction. Pour les hydrocarbures, tant saturés qu'aromatiques, le facteur essentiel est l'agitation du milieu d'extraction ; la nature du solvant n'est pas critique, à condition de ne pas choisir un très mauvais solvant des hydrocarbures : l'extractibilité est en effet plus fonction du pouvoir désorbant vis-à-vis de la roche que du pouvoir solvant proprement dit. Pour les résines et asphalténes, l'interprétation des résultats est délicate, car la frontière n'est pas nette entre produits simplement dissous, produits de solvolyse et, produits de néoformation par interaction solvant-matière organique-matière minérale. II n'existe donc pas de protocole d'extraction recommandable dans l'absolu. Tout dépend des exigences analytiques et aussi pratiques du laboratoire; à l'Institut Français du Pétrole (IFP le protocole retenu est l'extraction en bécher avec agitation magnétique pendant 20 min dans le chroroforme à 50 °C (approximativement; on donne aussi le protocole d'évaporation du solvant et de récupération de l'extrait, qui doit être étudié soigneusement étant donné les faibles quantités mises en jeu. A Soxhlet extractor cannot be used with rock samples that are too small in size. With the development of on extraction procédure for such cases, this article examines the influence of various operating conditions on extraction yield, i. e. temperature, duration, nature and amount of solvent, presence of light, présence of air and extraction process. For both saturated and aromatic hydrocarbons, the essential factor is the stirring of the

  11. ROCHE URYSIS-2400和AIKELAI AX-4030尿液干化学分析仪检测一致性的比较%Comparison on the consistency between ROCHE URYSIS-2400 and AIKELAI AX-4030 urine dry-chemistry analyzers

    Institute of Scientific and Technical Information of China (English)

    吴蕙; 王蓓丽; 郭玮; 潘柏申

    2014-01-01

    目的:比较ROCHE URYSIS-2400尿液干化学分析仪(简称URYSIS-2400)和AIKELAI AX-4030尿液干化学分析仪(简称AX-4030)的检测结果的一致性。方法分别用URYSIS-2400和AX-4030平行测定500例尿液常规标本,比较检测结果的阳性检出率和符合率。随机选取250例使用尿沉渣显微镜复核尿红细胞(ERY)和白细胞(LEU)。通过添加实验评估 URYSIS-2400、AX-4030抗维生素 C 干扰的能力。结果2台仪器比重(SG)差异百分率均值<1%,其余9项干化学检测项目一般符合率都>90%。URYSIS-2400和AX-4030 ERY项目与尿沉渣显微镜计数的符合率分别为82.4%、84.4%,LEU分别为76.0%和83.2%。URYSIS-2400、AX-4030葡萄糖(GLU)和ERY项目添加维生素C浓度达50 mg/dL时不受干扰。结论 URYSIS-2400和AX-4030检测结果一致性良好,但尿液干化学分析仪只是筛检仪器,还应结合显微镜尿沉渣计数复核的结果以满足临床需要。%Objective To compare the consistency of ROCHE URYSIS-2400 and AIKELAI AX-4030 urine dry-chemistry analyzers.Methods A total of 500 urine specimens were detected by the 2 kinds of urine chemistry analyzers in parallel,and the results were analyzed statistically by positive detection rates and accordance rates.A total of 250 cases were randomly selected for reviewing erythrocytes (ERY)and leulcocytes (LEU)by urine sediment microscopy. Experiments by adding vitamin C were used to evaluate URYSIS-2400 and AX-4030 anti-interference abilities against vitamin C.Results The mean difference percentage of specific gravity (SG)between the 2 analyzers was 90%.The consistency rates of URYSIS-2400 and AX-4030 were 82.4% and 84.4% with urine sediment microscopy on ERY,and 76.0% and 83.2% on LEU. URYSIS-2400 and AX-4030 anti-interference abilities against vitamin C were up to 50mg/dL on glucose (GLU)and ERY.Conclusions There is a good consistency between the results of URYSIS-2400 and AX

  12. Indices chimiques pour l'évaluation de l'état diagénétique des huiles et des roches sapropéliques Chemical Evidence for Evaluating the Diagenetic State of Sapropelic Oils and Rocks

    Directory of Open Access Journals (Sweden)

    Du Rouchet J.

    2006-11-01

    Full Text Available Les analyses chromatographiques des vapeurs produites par le chauffage à 220 °C d'huiles brutes et de roches mettent en évidence une augmentation avec la diagenèse des teneurs en n-alcanes relativement aux teneurs en cyclones et en iso-alcanes. Une étude statistique permet de préciser la regularite de l'evolution des rapports des teneurs en n-C 6 et en méthylcyclopentane etdes teneurs en n-C 7 et en I-trans-2-diméthylcyclopentane et met en évidence pour les roches une corrélation significative entre ces rapports et les réflectances de la vitrinite. Ces rapports peuvent donc être considérés comme des indicateurs diagénétiques; ils paraissent être moins dépendants des caractéristiques particulières de la matière organique originelle que les couples pristane-n-C 17 et phytane-n-C 18 habituellement utilisés pour repérer l'état d'évolution des huiles et des extraits de roche. Une calibration en termes de réflectance de la vitrinite est proposée. Chromatographic analyses of the vapors produced by crude cils and rocks heated to 220°C reveal, with diagenesis, an increase in the n-alkane contents with respect to the cyclone and isoalkane contents. A statistical survey shows the regularity of the variation in the ratios of the n-C 6 and methylcyclopentane contents and the n-C7 and I-trans-2-dimethylcyclopentane contents and reveals a meaningful corrélation for rocks between these ratios and the vitrinite reflectances. Therefore, these ratios may be considered as diagenetic indicators. They appear to depend less on the particular properties of the original organic motter thon on the pristane/n-C 17 and phytane/n-C 18 pairs normally used to determine the state of evolution of ails and of rock extracts. A calibration in terms of vitrinite reflectance is proposed.

  13. Case report: When measured free T4 and free T3 may be misleading. Interference with free thyroid hormones measurements on Roche® and Siemens® platforms

    Directory of Open Access Journals (Sweden)

    Lewandowski Krzysztof C

    2012-10-01

    Full Text Available Abstract A 59-year old female patient presented with apathy and 6 kg weight gain. Investigations revealed severe primary hypothyroidism (TSH>100 μIU/ml. L-thyroxine (L-T4 was started and titrated up to 75 μg, once daily, with clinical improvement. Other investigations revealed very high titres of anti-thyroid peroxidase (anti-TPO and anti-thyroglobulin (anti-Tg antibodies. After three months, there was a fall in TSH to 12.74 μIU/ml, however, with unexpectedly high free T4 (FT4 - 6.8 ng/ml and free T3 (FT3 - 6.7 pg/ml concentrations [reference range (rr: 0.8-1.9 ng/ml and 1.5-4.1 pg/ml (Siemens®, respectively]. At this stage L-T4 was stopped, and this was followed by a rapid increase in TSH (to 77.76 μIU/ml and some decrease in FT4 and FT3, however FT4 concentration remained elevated (2.1 ng/ml. Following this, L-T4 was restarted. On admission to our Department, she was clinically euthyroid on L-T4, 88 μg, once daily. Investigations on Roche® platform confirmed mildly elevated TSH - 5.14 (rr: 0.27-4.2 μIU/ml with high FT4 [4.59 (rr: 0.93-1.7 ng/ml] and FT3 [4.98 (rr: 2.6-4.4 pg/ml] concentrations. Other tests revealed hypoechogenic ultrasound pattern typical for Hashimoto thyroiditis. There was no discrepancy in calculated TSH value following TSH dilution (101% recovery. Concentrations of FT4 and FT3 were assessed on the day of discontinuation of L-T4 and after four days by the means of Abbott® Architect I 1000SR platform. These revealed FT4 and FT3 concentrations within the reference range [e.g., FT4 - 1.08 ng/ml (rr: 0.7-1.48] vs 4.59 ng/ml (rr: 0.93-1.7, Roche®, FT3 - 3.70 pg/ml (rr: 1.71-3.71 vs 4.98 (rr: 2.6-4.4, Roche®], confirming assay interference. Concentrations of ferritin and SHBG were normal. Conclusions Clinicians must be aware of possible assay interference, including the measurements of FT4 and FT3 in the differential diagnosis of abnormal results of thyroid function tests that do not fit the patient clinical

  14. Etude de l’activité pouzzolanique d’une roche andésitique en Algérie Study of the pozzolanic activity of an andesitic rock in Algeria

    Directory of Open Access Journals (Sweden)

    Clastres P.

    2012-09-01

    Full Text Available Ce travail s’inscrit dans le cadre de l’accord programme Tassili N° 09 MDU 773 entre le Laboratoire de Physicochimie des Matériaux, USTO-Oran et le Laboratoire des Matériaux et Durabilité des Constructions (LMDC, INSA-UPS-Toulouse, France. La présente étude est une contribution aux travaux de la recherche de nouvelles sources d’approvisionnement en ajouts et en matières premières et la valorisation des matériaux naturels locaux utilisés dans la fabrication du ciment. Cette étude porte sur l’activité pouzzolanique des roches volcaniques, elle a pour but de comparer les caractéristiques physiques et mécaniques d’un mortier témoin à ciment de type CEMI 52,5R fourni par la firme Lafarge et d’un mortier à ciment du même type avec ajout dont les taux de substitution de la roche Andésitique est de 0- 40%. Dans notre travail, nous avons utilisé des roches volcaniques appartenant à la famille des Andésites, provenant de la région de Tipaza, Nord Ouest Algérois. L’étude des caractéristiques mécaniques et de l’indice de pouzzolanicité ont montré que les ciments fabriqués sont capables de remplacer certains ciments Portland pour une éventuelle utilisation dans le domaine de construction. This work is a part of the agreement programs Tassili N° 09 MDU 773 between Laboratory of Physic-chemistry Materials, USTO-Oran and Laboratory of Materials and Durability of Constructions (LMDC, INSA-UPS-Toulouse, France. The present study is an attempt to the research of new supply sources in admixtures and raw materials and the evaluation of local natural materials used in the manufacture of cement. It deals with the pozzolanic activity of the volcanic rocks and aims to compare the physical and mechanical characteristics of a mortar control made with cement CEMI 52,5R provided by Lafarge firm and of a mortar made with the same cement incorporated by different replacement rate of andesitic rock in a range of 0 – 40

  15. Comparison of nested and ELISA based polymerase chain reaction assays for detecting Chlamydia trachomatis in pregnant women with preterm complications.

    Science.gov (United States)

    Sulaiman, S; Chong, P P; Mokhtarudin, R; Lye, M S; Wan Hassan, W H

    2014-03-01

    Identification of pregnant women infected with Chlamydia trachomatis is essential to allow early antibiotic treatment in order to prevent adverse pregnancy outcomes. In this study, two nucleic acid amplification tests (NAAT) namely nested PCR (BioSewoom, Korea) and Amplicor CT/NG (Roche Diagnostic, USA) were evaluated in terms of sensitivity and specificity for the detection of C. trachomatis DNA in pregnant women with preterm complications. A cross-sectional study was carried out in two public hospitals in Southern Selangor, Malaysia. Endocervical swabs obtained were subjected to DNA amplification using nested PCR (BioSewoom, Korea) and Amplicor CT/NG (Roche Diagnostic, USA). A total of 83 endocervical swabs obtained from pregnant women of less than 37 weeks gestation and presented with preterm complications were subjected to chlamydial DNA detection using both assays. The study shows that Amplicor CT/NG assay is more effective in the detection of C. trachomatis DNA from endocervical swabs compared to Biosewoom nested PCR kit. Agreement between the two assays were poor (kappa=0.094) with nested PCR showing a low sensitivity of 10.81% and a 97.83% specificity when compared to Amplicor CT/NG. The results obtained indicated that BioSewoom nested PCR was less sensitive than Amplicor CT/ NG for detecting C. trachomatis in endocervical specimens and that another more reliable test is required for confirmatory result.

  16. Mechanical Properties of Rocks: Pore Pressure and Scale Effects Propriétés mécaniques des roches : pression de pore et effets d'échelle

    Directory of Open Access Journals (Sweden)

    Gueguen Y.

    2006-12-01

    Full Text Available Pore pressure plays a major role when considering rocks mechanical properties. In that field, the concept of effective pressure is a key one to deal with fluids mechanical effects. However, its frequent use has been the source of frequent confusing statements. Because of the various meanings which have been attached to that concept, an attempt is made in this paper to clarify it and examine the validity of its various uses relative to rock mechanical behaviour or rock properties. At a macroscopic scale, thermodynamics provides a powerful tool to investigate this. Reversible or irreversible thermodynamics provide general relationships of great interest. But because real rocks are non homogeneous systems, a microscopic approach is also required in order to analyze the mechanical properties from a description of the small scale processes. The microscopic approach is complementary of the macroscopic thermodynamic one as it leads to the calculation of the effective properties of the medium. In this last approach, effective medium theory is a powerful tool. The effective properties as derived from the microscale can be nicely combined to thermodynamic relations to interpret pore fluid pressure effects and scale effects. The example of elastic properties of porous rocks is more specifically emphasized to illustrate this because of both its intrinsic interest and importance as far as applications are concerned. La pression de pore joue un rôle de première importance dans la considération des propriétés mécaniques des roches. Dans ce domaine, le concept de contrainte effective est essentiel pour aborder les effets mécaniques. Toutefois, son utilisation fréquente a conduit à de nombreuses affirmations trompeuses. Compte tenu des significations diverses accordées à ce concept, nous tentons ici de le clarifier et examinons le domaine d'application de ses divers emplois dans le cadre du comportement mécanique ou des propriétés des roches. À l

  17. Symposium international PARAM 2002 : Identification et détermination des paramètres des sols et des roches pour les calculs géotechniques, Paris, 2-3 septembre 2002

    OpenAIRE

    2002-01-01

    Les comptes rendus du symposium international sur l'identification et la détermination des paramètres des sols et des roches pour les calculs géotechniques, qui s'est tenu à Paris (France) les 2 et 3 septembre 2002, contiennent 61 communications. Ces communications traitent de sujets très variés et reflètent la situation actuelle de la recherche et de la pratique pour ce qui concerne le choix des paramètres pour les calculs de géotechnique. Les communications ont été réparties en quatre thème...

  18. 罗氏 Co bas c701全自动生化分析仪性能评价%Performance evaluation of Roche Cobas c 701 fully automatic biochemical analyzer

    Institute of Scientific and Technical Information of China (English)

    邓小玲; 侯玉磊; 陈特; 毕小云

    2015-01-01

    Objective To assess the performance of Roche Cobas c701 fully automatic biochemical analyzer. Methods According to EP15‐A2 from Clinical and Laboratory Standards Institute, the electrolyte (potassium, sodi‐um and chloride) and covers all the wavelengths of nine projects (alanine transaminase, aspartate transaminase, alka‐line phosphatase, gamma‐glutamine transaminase, creatinine and urea nitrogen, glucose, total protein, three acyl glyc‐erin) were measured by Roche Cobas c701 analyzer and original reagents. The precisions and accuracies of all parame‐ters were verified. Results In the 2 levels of tested parameters, the standard deviation of repeatability (Sr )was ≤the manufacture′s standard deviation of repeatability (σr ), and the standard deviation of prescision (St ) was≤the manu‐facture′s standard prescision (σt ), the prescision was acceptable and similar to what the manufacter declared. Correla‐tions between theoretic value and actual value were good (regression coefficient was :0. 999 4-1. 000 0). The bias of all parameters was acceptable (within the prescribed scope of CLIA′88)with Roche cobas c701analyzer, compared with the external quality assessment of the ministry of health clinical inspection center. Conclusion The repeatabili‐ty, precision and accuracy of the parameters by Roche Cobas c701 reach the performance that the manufacturer de‐clares.%目的:对罗氏Cobas c701全自动生化分析仪进行性能评价。方法按照美国临床和实验室标准化协会EP15‐A2文件的要求,通过电解质(钾、钠、氯)和涵盖各波长的9个项目(丙氨酸氨基转移酶、天门冬氨酸氨基转移酶、碱性磷酸酶、γ‐谷氨酰转移酶、肌酐、尿素氮、葡萄糖、总蛋白、三酰甘油)对仪器的精密度、准确度、线性范围等进行验证。结果所有检测项目的重复性标准差(Sr)≤厂家声明的标准差(σr)、精密度的标准差(St)≤σt ,均

  19. The Cretaceous Source Rocks in the Zagros Foothills of Iran Les roches mères Crétacé de l'avant-pays du Zagros en Iran : un exemple de bassin intracratonique de grande dimension

    Directory of Open Access Journals (Sweden)

    Bordenave M. L.

    2006-11-01

    Zagros, constituée par les 40 000 km2 du Dezful Embayment , une zone déprimée située dans la province du Khuzistan. Les accumulations d'huile sont associées à un système pétrolier d'âge Crétacé/Tertiaire comprenant six niveaux roches mères d'importance inégale : la partie inférieure de la formation Garau (Néocomien et les formations Gadvan (Barrémien, Ahmadi (Cénomanien inférieur, Gurpi (Sénonien et Pabdeh (Eocène. Ces intervalles sont à l'origine de 99 % des réserves d'huile découvertes à terre en Iran et produites dans deux réservoirs principaux : les calcaires de l'Asmari (Miocène inférieur et du Bangestan (Cénomanien. Ces réservoirs contiennent 330 milliards de barils en places, soit plus de 7 % des réserves mondiales actuelles. Cet article aborde le problème de la distribution des roches mères de l'avant pays iranien et de la partie iranienne du golfe Arabo-Persique. Les facteurs géologiques, océanologiques et climatiques favorisant la mise en place des conditions dysaérobiques et anaérobiques et le dépôt de sédiments riches en matière organique sont discutés. Le rôle de chacune de ces roches mères dans l'approvisionnement des accumulations d'huile est rapidement évoqué. Deux des roches mères Crétacé : la formation Garau déposée au Néocomien dans la région du Luristan, du nord-est du Khuzistan et de la partie nord-est du golfe Arabo-Persique et la formation Kazhdumi, déposée à l'Albien dans la partie centrale du Dezful Embayment, présentent un excellent potentiel pétrolier avec des valeurs initiales (avant maturation thermique de carbone organique pouvant parfois dépasser 10%, des Index d'Hydrogène (IH de l'ordre de 600 mg HC/g C et une épaisseur maximum supérieure à 300 m. La matière organique sédimentaire, d'origine algaire, contient de fortes teneurs en soufre, ce qui la qualifie comme un kérogène de type IIS. Ces roches mères se sont déposées dans les dépressions bien marquées faisant partie

  20. Une méthode précise pour la mise en évidence et l'étude de l'anisotropie dans les roches An Accurate Method for Detecting and Analyzing Anisotropy in Rocks

    Directory of Open Access Journals (Sweden)

    Talebi S.

    2006-11-01

    Full Text Available L'objectif essentiel de cette recherche était de mettre au point une méthode expérimentale pour étudier l'anisotropie de la vitesse des ondes longitudinales (P dans les roches. Cette anisotropie aurait deux causes principales : d'une part, l'existence d'un réseau de pores, de fissures ou de microfissures, distribué de façon anisotrope dans la roche et d'autre part, la structure elle-même, dont l'anisotropie résulte de la nature des minéraux et de leur disposition. Dans un premier temps, nous avons commencé les essais sur des échantillons de carotte, forés dans trois directions perpendiculaires X, Y et Z d'un bloc de deux types de grès : grès des Vosges et grès de Fontainebleau. La vitesse du son a été mesurée sur 3 à 4 sections de carotte avec des intervalles de 30° (6 directions. Elles se distribuent nettement selon une ellipse, appelée l'ellipse d'anisotropie. Ces ellipses ont été tracées par mini-ordinateur et ont permis de mettre en évidence l'état d'anisotropie et l'homogénéité des carottes. La méthode est tellement précise qu'une erreur de repérage des axes sur un échantillon (Y de grès des Vosges a été détectée et certifiée à l'aide de direction des micas. Nous avons effectué le même essai sur les mêmes échantillons saturés sous vide. Une tendance générale à l'augmentation des vitesses, la diminution du degré d'anisotropie (le rapport de Vmax/Vmin et le changement de position de l'axe d'anisotropie a été observée. La comparaison des résultats secs et saturés permet d'avoir une idée de la nature des vides et de leur rôle dans l'anisotropie globale. Dans l'étape suivante de l'étude, nous avons mis au point une méthode de mesure sur les cubes à faces tronquées (66 faces au maximum de différents types de roches (2 grès, 2 marbres, 1 andésite, 1 balsate, et 1 calcaire. Les valeurs de vitesses des ondes (P ont été mesurées et reportées sur un diagramme de Schmidt. Ensuite

  1. 罗氏2010免疫分析仪检测甲胎蛋白的性能验证%Analytical performance of roche 2010 immunoassay system in detecting AFP

    Institute of Scientific and Technical Information of China (English)

    王凡; 蒋红君

    2012-01-01

    目的 探讨罗氏2010免疫分析仪检测甲胎蛋白(AFP)的基本分析性能与质量要求的符合性.方法 参照相关的文件,分别对罗氏2010免疫分析仪检测AFP的精密度、准确度、临床可报告范围和参考区间进行验证.结果 测定均值为11.90 IU/ml的样本,验证后批内精密度为0.28 IU/ml,总精密度为0.45 IU/ml,测定均值为237.23 IU/ml的样本,验证后批内精密度为2.85 IU/ml,总精密度为3.50 IU/ml,均与厂家声明一致;高、低浓度定值质控品检测结果与靶值的相对偏差均小于5%,5份室间质评控制品检测结果与靶值的相对偏倚为-0.41%~6.61%;分析测量范围为0.514~992.7 IU/ml,临床可报告范围为0.514~158 832 IU/ml;参考区间与厂家声明一致.结论 罗氏2010电化学发光免疫分析仪测定AFP的精密度、准确度、分析测量范围性能均与厂家声明一致;此验证方案和实验方法简便易行,可用于其他检验项目的性能验证.%OBJECTIVE To validate the basic performance of Roche 2010 Immunoassay System in detecting fetoprotein (AFP). METHODS The precision, accuracy, reportable range and reference interval of the Roche 2012 Immunoassay System in detecting AFP were analyzed. RESULTS The results of within-run precisions were 0.28 IU/ml of 11.90 IU/ml AFP level and 2.85 IU/ml of 237.23 IU/ml AFP level. The total precisions were 0.45 IU/ml of 11.90 IU/ml AFP level and 3.50 IU/ml of 237.23 IU/ml AFP level. There results were consistent with manufacturer's instruction; The relative bias between the measured results and the target values was less than 5%, and the relative bias between the measured results and the EQA control samples at five levels was -0.41%-6.61%; measurement range was 0.514-992.7 IU/ml within manufacturer's liner range. Clinical re-portable range was 0.514-158 832 IU/ml; Reference interval was 0.0-5.8IU/ml, which was consistent with manufacturer's instruction. CONCLUSION The Roche 2010

  2. Performance verification of Roche COBAS6000 automatic electrochemiluminescence immunoassay analyzer%罗氏COBAS6000全自动电化学发光免疫分析仪性能验证

    Institute of Scientific and Technical Information of China (English)

    谭晓辉; 王勇

    2011-01-01

    目的 按ISO15189要求对罗氏COBAS 6000全自动电化学发光免疫分析仪的性能进行验证. 方法 对甲胎蛋白(alpha-fetoprotein,AFP)的精密度、准确度、临床可报告范围(clinical reportable range,CRR)、分析测量范围(analytical measurement range,AMR)、参考区间进行验证实验. 结果 批内精密度变异系数(coefficient variation,CV)高低值分别为3.28%和3.46%;日间精密度CV高低值分别为4.39%和5.13%,均小于厂家提供的CV(10%).相对偏差为0.862%,小于5%.分析测量范围为0.80-1 200 ng/ml,参考区间为0-20.00 ng/ml,临床可报告范围为0-60 000 ng/ml. 结论 罗氏COBAS 6000全自动电化学发光免疫分析仪的性能与厂家提供的资料基本一致,故可用其进行临床标本的检验工作,所得结果具有可信性.%Objeaive To test and verify the system performance of Roche COBAS 6000 automatic electrochemiluminescence immunoassay analyzer according to the requirements of IS015189. Methods Verification experiments were taken to measure the precision.accuracy , clinical reportable range( CRR) , analytical measurement range ( AMR ) , reference interval of alpha-feloprotein ( AFP) . Re-sults The high and low values of coefficient variation( CV) of inter-assay were 3. 28% and 3. 46% , and those of between-day precision were 4. 39% and 5. 13% , which were all less than the CV provided by the manufacturer( 1O% ) . Relative bias was 0. 862% . Analytical measurement range was 0.80 - 1 200 ng/ml.the reference interval was O - 20. 00 ng/ml, and the clinical reportable range was O 60 000 ng/ml. Conclusion The basic performances of Roche COBAS6000 automatic electrochemiluminescence immunoassay analyzer are consistent wich the data provided by the manufacturer,so it can be used to inspect the clinical samples and the results are credible.

  3. Evaluation of Roche Cobas E601 for Determining CEA%罗氏Cobas E601检测癌胚抗原的方法学性能评价

    Institute of Scientific and Technical Information of China (English)

    苏维; 王淑仙; 陈占良; 冯惠清; 段琳; 李逸阳

    2013-01-01

    目的:对罗氏Cobas E601全自动电化学发光免疫分析仪检测癌胚抗原(CEA)的分析性能进行验证。方法对CEA的精密度、准确度、测量线性范围、参考区间和交叉污染率进行验证实验。结果批内精密度高低两种浓度的(CV)分别为4.96%和4.38%,日间精密度高低两种浓度的CV分别为4.99%和4.81%;5份室间质控品的检测结果与靶值的偏倚在1.49%~3.57%;测量线性范围与厂家提供的范围相近;CEA的测量数值有96.3%在提供的参考区间内;交叉污染率为0.12%。结论罗氏Cobas E601检测CEA的方法学性能良好,检验结果准确可靠,能够满足临床检测的要求。%Objective To evaluate the effects of Roche Cobas E601 automatic electrochemiluminescence immunoassay analyzer for determining CEA. Methods To analyze E601’s measurement precision, accuracy, measurement range, reference interval and carryover rate of CEA, verification experiments were taken to measure. Results The high and low values of CV of inter-assay were 4.96%and 4.38%, and between-day CV were 4.99% and 4.81%; 5 quality-control serum’s relative bias were between 1.49%-3.57%; there was good linear relationship between measured values and expected values;there was 96.3%of the measurement data in the recommended reference interval;carryover rate range was 0.12%. Conclusion Roche Cobas E601 analyzer is stable, precise and accurate.

  4. Relationship between cyclosporine concentrations obtained using the Roche Cobas Integra and Abbott TDx monoclonal immunoassays in pre-dose and two hour post-dose blood samples from kidney transplant recipients.

    Science.gov (United States)

    Garrido, Manuel J; Hermida, Jesús; Tutor, J Carlos

    2002-12-01

    Current evidence suggests that cyclosporine (CsA) concentration in blood samples taken 2 hours after Neoral microemulsion (Novartis Pharmaceuticals; East Hanover, NJ) administration (C2) predicts clinical events in transplant patients better than the pre-dose (trough) concentration (C0). Similarly, previous findings have shown that the metabolites/CsA ratio is substantially lower in C2 than in C0 samples; however the between-monoclonal immunoassay differences for C2 samples have received little attention in the literature. In 56 C samples and 60 C samples from renal transplant patients, CsA levels were determined using the monoclonal fluorescence polarization immunoassay (mFPIA) from Abbott (Abbott Park, IL) and the homogeneous enzyme immunoassay technique (HEIT) from Roche Diagnostics (Basel, Switzerland). In both cases a high correlation coefficient between the results was obtained (r > or = 0.971), with a linear regression for C0 samples: mFPIA = 1.47 HEIT + 22.0 and for C2 samples: mFPIA = 1.11 HEIT + 71.96. The difference between the linear regression slopes was statistically significant (P < 0.001), and the mFPIA/HEIT ratio was significantly higher for C than for C samples (P < 0.001).

  5. Application of paper chromatography to the determination of some elements in minerals and rocks; Application de la chromatographie sur papier a la determination de certains elements dans les mineraux et les roches

    Energy Technology Data Exchange (ETDEWEB)

    Agrinier, H. [Commissariat a l' Energie Atomique, Fontenay-aux-Roses (France). Centre d' Etudes Nucleaires

    1964-11-01

    This publication describes our work in applying paper chromatography to the fields of mineralogy and geology. We have studied the separation and determination of the following elements: Nb, Ta, Ti, Co, Cu, Mn, Sn, Ge, As, Sb, Bi, U, Th, Be, Au, Pb, Zn, V and Mo. The development of separation methods for these various elements has led us to solve many interference problems. These methods make it possible to separate and measure mineral components. They also enable us to search for trace elements in ores, rocks soils and carbonaceous materials. Finally let us point out that this technique may equally be used for analysis in very radioactive environment. (author) [French] Dans cette etude, nous etendons le champ d'application de la chromatographie sur papier aux domaines de la mineralogie et de la geologie. Nous avons etudie la separation et la determination des elements suivants: Nb, Ta, Ti, Co, Cu, Mn, Sn, Ge, As, Sb, Bi, U, Th, Be, Au, Pb, Zn, V et Mo. La mise au point des methodes de separation concernant ces differents elements nous a amenes a resoudre de nombreux problemes d'interference. Ces methodes permettent la separation et le dosage des constituants des mineraux, ainsi que la recherche d'elements en traces dans les minerais, les roches, les sols et les materiaux carbonnes. Signalons pour terminer que cette technique peut egalement trouver son utilisation dans le domaine de l'analyse en milieu tres radio-actif. (auteur)

  6. [Comparison between the centrifugation on MPA C10 (Roche Diagnostics) and the centrifugation according recommendations of GEHT (Groupe d'étude de l'hémostase et de la thrombose) for the daily hemostasis assays].

    Science.gov (United States)

    Flamant, Fabrice; Borg, Jeanne-Yvonne; Lenormand, Bernard; Le Cam-Duchez, Véronique

    2014-01-01

    Actually, many laboratories tend to acquire pre analytic automates to prepare specimens for analysis. For haemostasis, these pre analytical modules are not always in agreement with the recommendations from the Groupe d'étude de l'hémostase et de la thrombose (GEHT). For example in the MPA C10 module (Roche Diagnostics) the speed of centrifugation was not rather fast compared with the GEHT recommandations. Then, to be able to use this automate for routine coagulation assays, we compared results of Quick time, activated partial prothombin time, fibrinogen, factor II, factor V, factor VII, factor X and antithrombin levels and unfractioned heparin anti-Xa activity measurement after MPA (1,885 g - 999 sec) or GEHT (2,500 g - 900 sec) protocol of centrifugation. First, we verified platelet counts: in 82% of specimens, the platelet counts were under 10.10(9)/L after centrifugation on MPA module. Moreover, a good correlation was observed in all comparisons. Then we concluded the MPA C10 module was usable for routine coagulation tests.

  7. Etude de la distribution des terres rares et des autres éléments en traces dans les roches carbonatées du district minier de Bou-Azzer-Bleïda (Anti-Atlas, Maroc) : conséquences génétiques et variations à l'approche des minéralisations

    OpenAIRE

    Zouita, Fouzia

    1986-01-01

    Différents types de roches carbonatées se trouvent dans les formations géologiques précambriennes du district minier de Bou-Azzer-Bleïda. Il s'agit de filons hydrothermaux ou de niveaux sédimentaires. L'utilisation de différentes méthodes d'analyses (dont la Spectrométrie de Masse à étincelles) permet de dresser l'inventaire des éléments majeurs et en traces y compris les Terres Rares dans ces différentes roches carbonatées. L'étude particulière de la répartition des Terres Rares dans ces mat...

  8. La difícil precisión de la noción de establecimiento permanente a través de la cláusula del agente dependiente (STS de 12 de enero de 2012, Caso Roche)

    OpenAIRE

    Ribes Ribes, Aurora

    2012-01-01

    La autora examina críticamente la Sentencia del Tribunal Supremo español de 12 de enero de 2012, recaída al hilo del Caso Roche, en relación con la determinanción de la existencia o no de establecimiento permanente a efectos fiscales, a través de la precisión de la cláusula del agente dependiente.

  9. Grouped frequent sequential patterns derived from terrestrial image time series to monitor landslide behaviour - Application to the dynamics of the Sanières/Roche Plombée rockslide.

    Science.gov (United States)

    Péricault, Youen; Pothier, Catherine; Méger, Nicolas; Trouvé, Emmanuel; Vernier, Flavien; Rigotti, Christophe; Malet, Jean-Philippe

    2016-04-01

    Image time series acquired with remote sensing methods based on optical terrestrial photogrammetry have great potential for understanding and monitoring the Earth surface dynamics at local scale, and are particularly interesting for landslide monitoring. Image correlation techniques can be applied to calculate the displacement fields, in either the image geometry or the terrain geometry if orthorectification procedures are applied. The resulting products are times series of displacement vectors for each epoch in which knowledge extraction techniques can be applied to discover relevant movement patterns in space and time. We used an unsupervised method (Grouped Frequent Sequential patterns / GFS-patterns) based on the mining of the displacement field. The method was originally developed for the analysis of time series of satellite images. It involves the extraction of trends / sub-trends affecting each pixel covering at least a minimum surface area and sufficiently connected to each other. The results of the mining are presented in spatio-temporal location maps (STL-map) of each GFS-pattern. In these maps, the spatial information is given by the pixel locations and the time information is displayed using a color ramp. The method is tested on a time series of 36 optical terrestrial images of the Sanières/Roche Plombée rockslide (South East French Alps) from 28 of July to 1 September 2014. From this series 35 2D displacement fields were calculated for epochs of three days, and the time series of vector magnitude and direction were analysed with GFS-patterns / STL-map. The method allowed identifying several patterns corresponding to different kinematical behaviour of the rockslide (long-term creep at the top of the slope, surficial movement of the debris at the base of the slope). The unsupervised knowledge extraction method GFS-pattern / STL-map, originally developed to analyse time series of satellite images showed in this study real possibilities of use for

  10. CLSI-based transference of the CALIPER database of pediatric reference intervals from Abbott to Beckman, Ortho, Roche and Siemens Clinical Chemistry Assays: direct validation using reference samples from the CALIPER cohort.

    Science.gov (United States)

    Estey, Mathew P; Cohen, Ashley H; Colantonio, David A; Chan, Man Khun; Marvasti, Tina Binesh; Randell, Edward; Delvin, Edgard; Cousineau, Jocelyne; Grey, Vijaylaxmi; Greenway, Donald; Meng, Qing H; Jung, Benjamin; Bhuiyan, Jalaluddin; Seccombe, David; Adeli, Khosrow

    2013-09-01

    The CALIPER program recently established a comprehensive database of age- and sex-stratified pediatric reference intervals for 40 biochemical markers. However, this database was only directly applicable for Abbott ARCHITECT assays. We therefore sought to expand the scope of this database to biochemical assays from other major manufacturers, allowing for a much wider application of the CALIPER database. Based on CLSI C28-A3 and EP9-A2 guidelines, CALIPER reference intervals were transferred (using specific statistical criteria) to assays performed on four other commonly used clinical chemistry platforms including Beckman Coulter DxC800, Ortho Vitros 5600, Roche Cobas 6000, and Siemens Vista 1500. The resulting reference intervals were subjected to a thorough validation using 100 reference specimens (healthy community children and adolescents) from the CALIPER bio-bank, and all testing centers participated in an external quality assessment (EQA) evaluation. In general, the transferred pediatric reference intervals were similar to those established in our previous study. However, assay-specific differences in reference limits were observed for many analytes, and in some instances were considerable. The results of the EQA evaluation generally mimicked the similarities and differences in reference limits among the five manufacturers' assays. In addition, the majority of transferred reference intervals were validated through the analysis of CALIPER reference samples. This study greatly extends the utility of the CALIPER reference interval database which is now directly applicable for assays performed on five major analytical platforms in clinical use, and should permit the worldwide application of CALIPER pediatric reference intervals. Copyright © 2013 The Canadian Society of Clinical Chemists. Published by Elsevier Inc. All rights reserved.

  11. Peer Group Learning in Roche Pharma Development

    Science.gov (United States)

    Boulden, George P.; De Laat, Richard

    2005-01-01

    Pharma Development has used action learning to help participants in their 360[degrees] feedback programme develop their leadership competencies. The article describes how the programme was designed, supported and run across four sites over a period of 2 years. The programme was systematically evaluated and found to be successful in meeting its…

  12. Observations sur les microfaciès des roches sédimentaires prélevées sur la marge armoricaine Observations on the Microfacies of Sedimentary Rock Samples from the Armorican Margin

    Directory of Open Access Journals (Sweden)

    Pastouret L.

    2006-11-01

    Full Text Available L'étude des dragages de roches et de sédiments effectués sur la marge armoricaine entre 47 et 48, de latitude Nord permet d'en préciser l'évolution paléogéographique et tectonique et de l'intégrer à celle du golfe de Gascogne. L'analyse de mi crofaciès des échantillons rocheux dont l'âge varie du Jurassique supérieur au Néogène met en évidence - d'une part, l'appartenance de la bordure nord de la marge armoricaine au domaine mésogéen au moins jusqu'au Crétacé moyen; - d'autre part, la permanence d'un régime de plate-forme carbonatée qui paraît fonctionner du Tithonique au Tertiaire inférieur, sur laquelle ont pu s'installer des édifices récifaux notamment au Crétacé moyen. Pendant toute cette période la sédimentation a compensé la subsidence; - enfin, l'accentuation de la subsidence à partir de l'Éocène (accompagnée d'une diminution de la production de calcium $ qui est vraisemblablement en relation avec les phénomènes tectoniques majeurs qui ont affecté à ce moment la bordure sud de la plaque européenne. A study of rock samples and sedimenis obtained by dredging from the Armorican Margin (47 ta 48° N brings new data on the paleogeographic and tectonic evolution of this ares in relation ta the formation of the Bay of Biscay. Microfacies ranging from the Upper Jurassic ta the Neogene show - the Armorican Margin until al least the Middle Cretaceous belongs to the Mesogean realm ; - carbonate platform regime prevails from the Tithonian to the Lower Tertiory with reef building occurring in the Middle Cretaceous. During this whole period in the area under consideration, sedimentation accounts for or even exceeds subsidence ; - the subsidence rate increases (and/or carbonate production decreases toward the end of the Eocene, and this may be related ta first order tectonic events offecting the southern part of the European plate.

  13. Smallpox and pan-orthopox virus detection by real-time 3'-minor groove binder TaqMan assays on the roche LightCycler and the Cepheid smart Cycler platforms.

    Science.gov (United States)

    Kulesh, David A; Baker, Robert O; Loveless, Bonnie M; Norwood, David; Zwiers, Susan H; Mucker, Eric; Hartmann, Chris; Herrera, Rafael; Miller, David; Christensen, Deanna; Wasieloski, Leonard P; Huggins, John; Jahrling, Peter B

    2004-02-01

    We designed, optimized, and extensively tested several sensitive and specific real-time PCR assays for rapid detection of both smallpox and pan-orthopox virus DNAs. The assays are based on TaqMan 3'-minor groove binder chemistry and were performed on both the rapid-cycling Roche LightCycler and the Cepheid Smart Cycler platforms. The hemagglutinin (HA) J7R, B9R, and B10R genes were used as targets for the variola virus-specific assays, and the HA and DNA polymerase-E9L genes were used as targets for the pan-orthopox virus assays. The five orthopox virus assays were tested against a panel of orthopox virus DNAs (both genomic and cloned) at the U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID). The results indicated that each assay was capable of detecting both the appropriate cloned gene and genomic DNA. The assays showed no cross-reactivity to the 78 DNAs in the USAMRIID bacterial cross-reactivity panel. The limit of detection (LOD) of each assay was determined to be between 12 and 25 copies of target DNA. The assays were also run against a blind panel of DNAs at the Centers for Disease Control and Prevention (CDC) on both the LightCycler and the Smart Cycler. The panel consisted of eight different variola virus isolates, five non-variola virus orthopox virus isolates, two varicella-zoster virus isolates, and one herpes simplex virus isolate. Each sample was tested in triplicate at 2.5 ng, 25 pg, 250 fg, and 2.5 fg, which represent 1.24 x 10(7), 1.24 x 10(5), 1.24 x 10(3), and 1.24 x 10(1) genome equivalents, respectively. The results indicated that each of the five assays was 100% specific (no false positives) when tested against both the USAMRIID panels and the CDC blind panel. With the CDC blind panel, the LightCycler was capable of detecting 96.2% of the orthopox virus DNAs and 93.8% of the variola virus DNAs. The Smart Cycler was capable of detecting 92.3% of the orthopox virus DNAs and between 75 and 93.8% of the variola virus DNAs

  14. Smallpox and pan-Orthopox Virus Detection by Real-Time 3′-Minor Groove Binder TaqMan Assays on the Roche LightCycler and the Cepheid Smart Cycler Platforms

    Science.gov (United States)

    Kulesh, David A.; Baker, Robert O.; Loveless, Bonnie M.; Norwood, David; Zwiers, Susan H.; Mucker, Eric; Hartmann, Chris; Herrera, Rafael; Miller, David; Christensen, Deanna; Wasieloski, Leonard P.; Huggins, John; Jahrling, Peter B.

    2004-01-01

    We designed, optimized, and extensively tested several sensitive and specific real-time PCR assays for rapid detection of both smallpox and pan-orthopox virus DNAs. The assays are based on TaqMan 3′-minor groove binder chemistry and were performed on both the rapid-cycling Roche LightCycler and the Cepheid Smart Cycler platforms. The hemagglutinin (HA) J7R, B9R, and B10R genes were used as targets for the variola virus-specific assays, and the HA and DNA polymerase-E9L genes were used as targets for the pan-orthopox virus assays. The five orthopox virus assays were tested against a panel of orthopox virus DNAs (both genomic and cloned) at the U.S. Army Medical Research Institute of Infectious Diseases (USAMRIID). The results indicated that each assay was capable of detecting both the appropriate cloned gene and genomic DNA. The assays showed no cross-reactivity to the 78 DNAs in the USAMRIID bacterial cross-reactivity panel. The limit of detection (LOD) of each assay was determined to be between 12 and 25 copies of target DNA. The assays were also run against a blind panel of DNAs at the Centers for Disease Control and Prevention (CDC) on both the LightCycler and the Smart Cycler. The panel consisted of eight different variola virus isolates, five non-variola virus orthopox virus isolates, two varicella-zoster virus isolates, and one herpes simplex virus isolate. Each sample was tested in triplicate at 2.5 ng, 25 pg, 250 fg, and 2.5 fg, which represent 1.24 × 107, 1.24 × 105, 1.24 × 103, and 1.24 × 101 genome equivalents, respectively. The results indicated that each of the five assays was 100% specific (no false positives) when tested against both the USAMRIID panels and the CDC blind panel. With the CDC blind panel, the LightCycler was capable of detecting 96.2% of the orthopox virus DNAs and 93.8% of the variola virus DNAs. The Smart Cycler was capable of detecting 92.3% of the orthopox virus DNAs and between 75 and 93.8% of the variola virus DNAs. However

  15. Evaluation of the performance of Abbott m2000 and Roche COBAS Ampliprep/COBAS Taqman assays for HIV-1 viral load determination using dried blood spots and dried plasma spots in Kenya.

    Science.gov (United States)

    Zeh, Clement; Ndiege, Kenneth; Inzaule, Seth; Achieng, Rebecca; Williamson, John; Chih-Wei Chang, Joy; Ellenberger, Dennis; Nkengasong, John

    2017-01-01

    Routine HIV viral load testing is not widely accessible in most resource-limited settings, including Kenya. To increase access to viral load testing, alternative sample types like dried blood spots (DBS), which overcome the logistic barriers associated with plasma separation and cold chain shipment need to be considered and evaluated. The current study evaluated matched dried blood spots (DBS) and dried plasma spots (DPS) against plasma using the Abbott M 2000 (Abbott) and Roche Cobas Ampliprep/Cobas TaqMan (CAP/CTM) quantitative viral load assays in western Kenya. Matched plasma DBS and DPS were obtained from 200 HIV-1 infected antiretroviral treatment (ART)-experienced patients attending patient support centers in Western Kenya. Standard quantitative assay performance parameters with accompanying 95% confidence intervals (CI) were assessed at the assays lower detection limit (400cps/ml for CAP/CTM and 550cps/ml for Abbott) using SAS version 9.2. Receiver operating curves (ROC) were further used to assess viral-load thresholds with best assay performance (reference assay CAP/CTM plasma). Using the Abbott test, the sensitivity and specificity, respectively, for DPS were (97.3%, [95%CI: 93.2-99.2] and 98.1% [95%CI: 89.7-100]) and those for DBS (93.9% [95%CI: 88.8-97.2] and 88.0% [95%CI: 82.2-92.4]). The correlation and agreement using paired plasma and DPS/DBS were strong, with r2 = 90.5 and rc = 68.1. The Bland-Altman relative percent change was 95.3 for DPS, (95%CI: 90.4-97.7) and 73.6 (95%CI: 51.6-86.5) for DBS. Using the CAP/CTM assay, the sensitivity for DBS was significantly higher compared to DPS (100.0% [95% CI: 97.6-100.0] vs. 94.7% [95%CI: 89.8-97.7]), while the specificity for DBS was lower: 4%, [95% CI: 0.4-13.7] compared to DPS: 94.0%, [95% CI: 83.5-98.7]. When compared under different clinical relevant thresholds, the accuracy for the Abbott assay was 95% at the 1000cps/ml cut-off with a sensitivity and specificity of 96.6% [95% CI 91.8-98.7] and 90

  16. Observations on the Primary Migration of Oil in the la Luna Source Rocks of the Maracaibo Basin, Venezuela Observations de la migration primaire de l'huile dans les roches mères de la Formation de La Luna dans le bassin de Maracaïbo, Venezuela

    Directory of Open Access Journals (Sweden)

    Talukdar S.

    2006-11-01

    Full Text Available In the present work, an integrated approach has been made to understand the primary migration of oil in the organic-rich, oil prone, predominantly carbonate source rocks of the La Luna Formation of the Maracaibo Basin. Geochemical data on source rock extracts and the simulation of oil generation by hydrous-pyrolysis experiments indicate that the primary migration and expulsion of oil began at an early stage of thermal maturity and that the bulk oil expulsion at peak generation could have been as high as 75%. Fluorescence and transmitted light petrography of the source rocks at different maturity levels show the dominant mode of oil expulsion through microfractures. It is interpreted from the geochemical and geological data that the primary migration of oil in the La Luna source rocks took place as a separate oil phase through microfractures caused by the excess fluid pressure due to hydrocarbon generation. The oils expelled from the La Luna source are enriched in saturated hydrocarbons and depleted in resins + asphaltenes compared to the La Luna rock extracts. However the distributions of n-alkanes, in the oils and the rock extracts are very similar, which suggest that fractionation of the n-alkanes did not occur during the primary migration. In the Maracaibo Basin, updip lateral primary migration of oil within the La Luna source system seem to have occurred for a considerable distance. Local internal migration has been observed at a relatively early stage of maturity. Cette étude consiste en une approche intégrée cherchant à comprendre la migration primaire de l'huile dans les roches mères de la Formation de La Luna dans le bassin de Maracaïbo, riches en matière organique, génératrices d'huile et à dominante carbonatée. Les données géochimiques sur des extraits de roches mères et la simulation de genèse d'huile par des expériences de pyrolyse en présence d'eau indiquent que la migration primaire et l'expulsion de l'huile ont

  17. A multiplexed microfluidic PCR assay for sensitive and specific point-of-care detection of Chlamydia trachomatis.

    Directory of Open Access Journals (Sweden)

    Deborah Dean

    Full Text Available BACKGROUND: Chlamydia trachomatis (Ct is the most common cause of bacterial sexually transmitted diseases (STD worldwide. While commercial nucleic acid amplification tests (NAAT are available for Ct, none are rapid or inexpensive enough to be used at the point-of-care (POC. Towards the first Ct POC NAAT, we developed a microfluidic assay that simultaneously interrogates nine Ct loci in 20 minutes. METHODOLOGY AND PRINCIPAL FINDINGS: Endocervical samples were selected from 263 women at high risk for Ct STDs (∼35% prevalence. A head-to-head comparison was performed with the Roche-Amplicor NAAT. 129 (49.0% and 88 (33.5% samples were positive by multiplex and Amplicor assays, respectively. Sequencing resolved 71 discrepant samples, confirming 53 of 53 positive multiplex samples and 12 of 18 positive Amplicor samples. The sensitivity and specificity were 91.5% and 100%, and 62.4% and 95.9%, respectively, for multiplex and Amplicor assays. Positive and negative predictive values were 100% and 91%, and 94.1% and 68.6%, respectively. CONCLUSIONS: This is the first rapid multiplex approach to Ct detection, and the assay was also found to be superior to a commercial NAAT. In effect, nine simultaneous reactions significantly increased sensitivity and specificity. Our assay can potentially increase Ct detection in globally diverse clinical settings at the POC.

  18. Generation of Anomalous Internal Pressures in Source Rocks and Its Role in Driving Petroleum Migration La genèse de pressions internes anormales dans les roches mères et son rôle de poussée dans la migration du pétrole

    Directory of Open Access Journals (Sweden)

    Barker C.

    2006-11-01

    . La présence de gaz conduit à des comportements très différents et la pression de pores dans les roches mères inférieure à la normale à moins qu'il n'y ait une genèse suffisante de la matière organique en hydrocarbures pour la compenser. En l'absence d'une genèse continue (c'est-à-dire pour le méthane biogénique, le gaz se dissout régulièrement et les pressions chutent considérablement en dessous de la pression hydrostatique. A l'inverse, sur les élévations, les systèmes gazéifères ont tendance à la surpression et la pression peut atteindre la charge de fracturation de la roche. Le craquage thermique des bitumes qui restent dans une roche mère au cours de l'enfouissement va de pair avec une augmentation de volume et, dans un pore isolé, le système des pressions atteint des valeurs élevées. Il suffit qu'un pour cent des bitumes de type huile soit transformé en gaz pour que la pression atteigne la charge pour laquelle la fracturation de la roche est une conséquence inévitable.

  19. 运用COBAS AMPLICOR HCV系统快速检测HCV RNA

    Institute of Scientific and Technical Information of China (English)

    江志奎; Albad,J

    1999-01-01

    近年来实验室诊断丙型肝炎病毒(HCV)PCR法已向标准化和“即可用”的方向发展。本试验用来自5个检测中心的2000多份标本对首台自动化扩增和检测HCV RNA的仪器COBAS在日常实验室工作中的性能进行了评估。结果表明,自动的COBAS法与AMPLICOR手工法同样准确,符合率达99.8%。PCR法与血清学方法的结果并不完全一致,因为抗HCV抗体的存在有可能表示隐性感染或既往感染。如果以抗HCV抗

  20. 罗氏生化多项定标液(CFAS)在 ADVIA1800自动生化仪上的应用%Roche biochemical multiple calibration solution (CFAS)used in the ADVIA 1800 automatic biochemical discussion on

    Institute of Scientific and Technical Information of China (English)

    周明欣

    2016-01-01

    目的:规范实验室生化项目的参考范围,统一临床检验数值,为临床医师提供更准确、更一致的检验结果,方便患者治疗效果的评价。方法同步于罗氏Cobas C501自动生化仪和ADVIA1800自动生化仪上进行多项目的评价。结果1.定标与校正验证合格;2.正常质控品和异常质控品在可控范围内;3.临床常规标本比对评价没有显著性差异。结论罗氏生化多项定标液(CFAS)在ADVIA1800自动生化仪上的应用效果满意,能为医师提供准确、统一的检验结果,方便医师治疗病人及疗效观察。%Objective to standardize laboratory biochemical reference scope of the project ,unified clinical inspection number , provide clinicians with more accurate and more consistent test results ,convenient patient treatment effect evaluation .Methods the synchronous in roche Cobas C501 automatic biochemistry analyzer and multiple objective evaluation ADVIA 1800 automatic bio‐chemistry analyzer .Results 1 ,the calibration and correction verification qualified ,2 ,normal quality products and quality control within the scope of the controllable ,3 ,there is no significant difference between clinical specimens of normal ratio evaluation .Con‐clusion roche biochemical multiple scaling liquid(CFAS)in the application effect of satisfaction on ADVIA 1800 automatic biochem‐istry analyzer ,for physicians to provide accurate ,unified inspection result ,convenient for doctors treat patients and curative effect observation .

  1. Evaluation of Cobas TaqMan MTB PCR for detection of Mycobacterium tuberculosis.

    Science.gov (United States)

    Kim, Jeong Hyun; Kim, Young Jae; Ki, Chang-Seok; Kim, Ji-Youn; Lee, Nam Yong

    2011-01-01

    Nucleic acid-based amplification tests allow the rapid detection of Mycobacterium tuberculosis. Recently, a real-time PCR assay for M. tuberculosis complex, the Cobas TaqMan MTB test (Roche Diagnostics, Basel, Switzerland), was introduced. We performed a prospective study to evaluate the diagnostic performance of the Cobas TaqMan MTB test system. A total of 406 specimens collected from 247 patients were simultaneously tested by conventional culture, Cobas Amplicor MTB PCR, and TaqMan MTB PCR. The cross-reactivity with other Mycobacterium species and the detection limit were also evaluated. Among 406 specimens, a total of 24 specimens (5.9%) were culture positive: 14 specimens were positive by both TaqMan and Amplicor MTB PCRs, while 5 specimens were positive by only TaqMan PCR. The remaining five specimens were negative by both PCR methods. Seven specimens with negative culture results were positive by TaqMan PCR, but five of these were negative by Amplicor MTB PCR. The sensitivity, specificity, and positive (PPV) and negative (NPV) predictive values were 79.1%, 98.2%, 73.1%, and 98.7% for TaqMan and 58.3%, 99.5%, 87.5%, and 97.4% for the Amplicor MTB PCR test, respectively. There was no cross-reactivity with M. tuberculosis and nontuberculous mycobacterial species. The detection limit for the Cobas TaqMan MTB PCR test was 4.0 copies/μl. The Cobas TaqMan MTB PCR test showed higher sensitivity for detection of the M. tuberculosis complex without disturbing the specificity and NPV than the Amplicor MTB PCR test.

  2. The method of evaluation and establishment of reference intervals of serum iron in the Roche ModularDDP automatic biochemical analyzer%罗氏ModularDDP全自动生化分析仪检测血清铁的方法学评价及参考区间建立

    Institute of Scientific and Technical Information of China (English)

    廖君群; 毕小云

    2012-01-01

    Objective To evaluate the serum iron(SI) detection method in the Roche ModularDDP automatic biochemical analyzer,and establish the laboratory reference range. Methods We collected 240 samples of healthy people,detected SI with FerroZine spectrophotometry and established the laboratory reference interval. According to American Society for Clinical Laboratory Standards Committee EP documents, the detection of SI was evaluated with the precision, accuracy, linearity, detection limit (detection limit) and interference. Results The accuracy of SI was below 2%, the accuracy was between 97. 93% and 103. 48%,with minimum detection limit as 0. 28 μmol/L,the linearity was from 0. 95 μmol/L to 184. 40 μmol/L. Hemoglobin((第3版)血清铁测定的参考区间有明显差异,说明该参考区间不可直接引用,也说明了进行方法学评价的重要性.

  3. Evaluation of Abbott RealTime CT/NG assay for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in cervical swabs from female sex workers in China.

    Directory of Open Access Journals (Sweden)

    Yan Han

    Full Text Available BACKGROUND: To evaluate the performance of the Abbott RealTime CT/NG assay for detection of Chlamydia trachomatis (CT and Neisseria gonorrhoeae (NG among female sex workers (FSWs in China. METHODS: Cervical swabs from 997 participants were blindly detected by the Abbott RealTime CT/NG assay on the automated m2000 molecular platform and Roche Cobas Amplicor CT/NG assay. Discrepant analysis were confirmed by the Qiagen care CT PCR assay. The sample was defined as candidate nvCT-positive if it was CT positive in the Abbott m2000 assay, but CT negative in the other two assays. RESULTS: 25 specimens that were discordant for CT and 26 specimens that were discordant for NG between the two assays were resolved by Qiagen care CT & NG PCR assays. The sensitivity and specificity, respectively, for Abbott m2000 assay were 92.59% and 100% for CT and 95.45% and 99.90% for NG. The positive predictive value (PPV and negative predictive value (NPV of Abbott m2000 assay were100% and 98.52% for CT and 95.5% and 99.90% for NG, respectively. No candidate new-variant CT(nvCTspecimens were identified. CONCLUSION: Abbott RealTime CT/NG assay were more specify for CT and NG detection, however, its sensitivity for CT and NG were a little bit lower than Roche Cobas Amplicor CT/NG assay. Abbott RealTime CT/NG assay had higher PPV for NG detection than Roche Cobas Amplicor CT/NG assay; it would be more suitable for screening for population with low-prevalence NG. There is currently no evidence that nvCT is present in FSWs in China.

  4. Étude de la mouillabilité des roches réservoir à l'échelle du pore par cryomicroscopie électronique à balayage Wettability of Reservoir Rock At the Pore Scale: Contribution of Cryo-Scanning Electron Microscopy

    Directory of Open Access Journals (Sweden)

    Fassi-Fihri O.

    2006-11-01

    Full Text Available Le but de cette étude est de caractériser, à l'échelle du pore, la mouillabilité des roches réservoir, en relation avec leur géométrie et/ou leur minéralogie. Cette caractérisation se fait, après congélation des échantillons, par l'observation de la distribution des fluides au sein du milieu poreux (saumure et huile brute, en microscopie électronique à balayage. Les expériences ont d'abord été effectuées sur des roches modèles parfaitement mouillables à l'eau, verre fritté et grès naturels. Certains de ces minéraux ont été rendus hydrophobes par greffage de silane. L'étude de ces systèmes a mis en évidence une corrélation entre la mouillabilité et la distribution des fluides. Puis, une roche réservoir (grès argileux de la formation de Brent, de mer du Nord connue comme étant de mouillabilité intermédiaire a été étudiée. Un travail précédent (étude de déplacements eau/huile par tomographie X avait abouti à la conclusion que si ces roches présentaient des hétérogénéités de mouillabilité, l'échelle de ces hétérogénéités devait être inférieure au millimètre. Les études de cryomicroscopie ont montré le caractère hydrophobe de la kaolinite, tandis que les illites, le quartz et les feldspaths sont préférentiellement mouillables à l'eau. L'imbibition spontanée d'huile pourrait ainsi être attribuée à l'existence au sein de la roche d'un réseau de kaolinite, tandis que l'imbibition spontanée de saumure serait due à l'existence d'un second réseau plus ou moins imbriqué avec le premier et constitué des autres minéraux. Un autre cas de roche réservoir a été étudié, à savoir un carbonate du Moyen-Orient. Les mésopores intergranulaires y ont été observés comme étant mouillables à l'huile tandis que les micropores restaient mouillables à l'eau. Dans ce cas, la mouillabilité intermédiaire de ces échantillons s'explique par la géométrie plutôt que par la min

  5. Comparison of the Roche RealTime ready Influenza A/H1N1 Detection Set with CDC A/H1N1pdm09 RT-PCR on samples from three hospitals in Ho Chi Minh City, Vietnam

    Science.gov (United States)

    Tham, Nguyen thi; Hang, Vu thi Ty; Khanh, Trong Huu; Viet, Do Chau; Hien, Tran Tinh; Farrar, Jeremy; van Vinh Chau, Nguyen; van Doorn, H. Rogier

    2012-01-01

    Background Real-time PCR can be considered the gold standard for detection of influenza viruses due to its high sensitivity and specificity. Roche has developed the RealTime ready Influenza A/H1N1 Detection Set, consisting of a generic influenza virus A PCR targeting the M2 gene (M2 PCR) and a specific PCR targeting the HA of A/H1N1-pdm09 (HA PCR, 2009 H1N1), with the intention to make a reliable, rapid, and simple test to detect and quantify 2009 H1N1 in clinical samples. Methods We evaluated this kit against the USCDC/WHO real-time PCR for influenza virus using 419 nose and throat swabs from 210 patients collected in 3 large hospitals in Ho Chi Minh city, Vietnam. Results In the per patient analysis, when compared to CDC PCR, the sensitivity and specificity of the M2 PCR were 85.8 and 97.6%, respectively; the sensitivity and specificity of HA PCR were 88.2 and 100%, respectively. In the per sample analysis, the sensitivity and specificity in nose swabs were higher than in throat swabs for both M2 and HA PCRs. The viral loads as determined with the M2 and HA PCRs correlated well with the Ct values of the CDC PCR. Conclusion Compared with the CDC PCR, the kit has a reasonable sensitivity and very good specificity for the detection and quantification of Influenza A virus and A/H1N1-pdm09. However, given the current status of 2009 H1N1, a kit that can detect all circulating seasonal influenza viruses would be preferable. PMID:22785431

  6. In the heart of rock; Au coeur de la roche

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-01-01

    This educational document gives a presentation of the Andra underground research laboratory of Bure (Haute-Marne and Meuse, France) devoted to the study of the underground disposal of radioactive wastes. The document is presented in the form of a comics. It describes the geological setting of the laboratory, located in the eastern edge of the Paris basin, the properties of the Callovian-Oxfordian clay layer, the digging of the boreholes and galleries, the mine-by test and its instrumentation, the backfilling and sealing of the galleries and the reversibility of the burial of radioactive waste containers. (J.S.)

  7. Clinical Performance of Roche Cobas 4800 HPV Test

    Science.gov (United States)

    Cui, Miao; Chan, Nicholas; Liu, Momo; Thai, Khanh; Malaczynska, Joanna; Singh, Ila; Zhang, David

    2014-01-01

    Evaluation of the Cobas 4800 test demonstrated that Cobas had a low rate of cross-reactivity with low-risk human papillomavirus (lrHPV), a 3.74% disconcordance rate between prealiquots and postaliquots, and failure rates of 4.57% and 1.16%, respectively, after vortexing and swirling. This study demonstrated that the Cobas test has good sensitivity, accuracy, and reproducibility for detecting 14 high-risk HPV (hrHPV) genotypes. PMID:24719443

  8. Mida roheline tarbija tahab / Catherine Roche ; intervjueerinud Michael S. Hopkins

    Index Scriptorium Estoniae

    Roche, Catherine, 1977-

    2009-01-01

    2008. a. tehtud uuringust, mille abil selgitati välja, mis põhjustel inimesed eelistavad tarbimisel rohelist tootevalikut. Skeemid: Valmisolek maksta rohelise eest rohkem sõltub tootekategooriast ja tajutavatest eelistest; Teadlikkus ja valik

  9. Mida roheline tarbija tahab / Catherine Roche ; intervjueerinud Michael S. Hopkins

    Index Scriptorium Estoniae

    Roche, Catherine, 1977-

    2009-01-01

    2008. a. tehtud uuringust, mille abil selgitati välja, mis põhjustel inimesed eelistavad tarbimisel rohelist tootevalikut. Skeemid: Valmisolek maksta rohelise eest rohkem sõltub tootekategooriast ja tajutavatest eelistest; Teadlikkus ja valik

  10. A Riemann-Roch Theoremfor One-Dimensional Complex Groupoids

    Science.gov (United States)

    Perrot, Denis

    We consider a smooth groupoid of the form Σ⋊Γ, where Σ is a Riemann surface and Γ a discrete pseudogroup acting on Σ by local conformal diffeomorphisms. After defining a K-cycle on the crossed product C0(Σ)⋊Γ generalising the classical Dolbeault complex, we compute its Chern character in cyclic cohomology, using the index theorem of Connes and Moscovici. This involves in particular a generalisation of the Euler class constructed from the modular automorphism group of the von Neumann algebra L∞(Σ)⋊Γ.

  11. Quantitation of HIV-1 RNA in breast milk by real time PCR.

    Science.gov (United States)

    Becquart, Pierre; Foulongne, Vincent; Willumsen, Juana; Rouzioux, Christine; Segondy, Michel; Van de Perre, Philippe

    2006-04-01

    HIV-1 RNA in breast milk is a strong predictor of HIV-1 transmission through breastfeeding. In the present report, breast milk samples from HIV-1 uninfected donors were spiked with dilution of quantified culture supernatant from HIV-1(NDK) infected PBMC. Two RNA extraction techniques based on silica extraction, Nuclisens (BioMerieux) and Triazol (Qiagen), two techniques based on guanidine thiocynanate/chloroforme extraction, TRIzol (Life Technologie) and Amplicor HIV-1 Monitor (Roche Diagnostic Systems), and one technique based on electrostatic adsorption on iron oxide micro beads (Promega) were compared. HIV-1 RNA was quantitated by real time PCR (LTR gene) and Amplicor HIV-1 Monitor. Combining magnetic micro beads extraction and real time PCR quantitation allowed to correctly quantify breast milk HIV-1 RNA, with a difference between the expected and measured HIV-1 RNA levels always lower than 0.3 log copies/ml. The same combination was confirmed on 25 breast milk samples from HIV-1 infected women collected in Kwazulu-Natal, South Africa, by comparing measurements with those obtained by the Amplicor HIV-1 Monitor (r(2)=0.88). Nucleic acid extraction by magnetic micro beads followed by real time PCR is a reliable, sensitive, rapid and simple procedure to quantify HIV-1 RNA in breast milk and allows for PCR inhibitors found frequently in these samples.

  12. Le souffre thiophénique dans les pétroles et les extraits de roche. Analyse par spectrométrie de masse et chromatographie en phase gazeuse Mass-Spectrometry and Gas-Chromatography Analysis of Thiophene Sulfur in Oil and Rock Extracts

    Directory of Open Access Journals (Sweden)

    Castex H.

    2006-11-01

    Full Text Available On étudie par spectrométrie de masse à haute résolution la répartition du soufre thiophénique par coupe de distillation et par nombre de carbone dans la fraction > C10 d'un pétrole brut. Parallèlement on chromatographie à l'aide d'un détecteur sélectif à photométrie de flamme les diverses fractions thiophéniques. L'examen des chromatogrammes permet de déterminer les zones dé réponse et l'allure générale des différentes coupes thiophéniques. Les applications sont variées : on vérifie le bien-fondé de l'utilisation d'un spectromètre de masse à basse résolution pour les analyses en routine d'huiles brutes et on peut, par la connaissance des différents profils de type thiophénique prévoir des analogies ou des différences au sein d'huiles brutes et d'extraits de roche d'un même bassin pétrolier, ce qui limite le nombre d'échantillons à analyser en détail. High-resolution mass spectrometry is used to analyze the distribution of thiophenic sulfur per distillation cut and per carbon number in the > C10 fraction of a crude oil. At the same time, a selective flame-photometry sensor is used to chromatograph the different thiophenic fractions. An analysis of the chromatograms serves to determine the response zones and the general aspect of the different thiophenic cuts. There are various applications of this process. The validity of using a low-resolution mass spectrometer is checked for routine crude-cil analyses. By determining the different profiles of the thiophenic type, similarities or differences can be predicted in the crude cils and rock extracts from the saure cil basin. This limits the number of samples having to be analyzed in detail.

  13. Proposition d'explication de la formation d'hydrogène sulfuré dans les stockages souterrains de gaz naturel par réduction des sulfures minéraux de la roche magasin Proposed Explanation of Hydrogen-Sulfide Formation in Underground Natural-Gas Storage Structures by Reduction of Mineral Sulfides in the Reservoir Rock.

    Directory of Open Access Journals (Sweden)

    Bourgeois J. P.

    2006-11-01

    Full Text Available La formation d'hydrogène sulfuré dans les structures de stockage peu expliquer autrement que par l'action de bactéries sulfato-réductrices. La contenue dans la roche magasin constitue une source de sulfures capable d'alimenter en H2S le gaz naturel. La réduction de la pyrite en sulfures du type Fe 1-x S et l'équilibre de dissolution précipitation, lié principalement à la pression de CO2, dans les structures stockages, constituent un processus de formation d'H2S capable d'expliquer tativement et quantitativement les phénomènes observés sur le terrain. Un modèle simplifié de stockage reprend ce schéma et teste la sensibililté de la teneur en H2S à la valeur des paramètres physiques et chimiques définissant le stockage. Cette étude permet de proposer un certain nombre d'actions susceptibles de limiter la formation d'H2S et d'orienter les choix futurs du couple gaz naturel - structures de stockage. The formation of hydrogen sulfide in storage structures can be explained otherwise thon by the action of sulfate-reducing bacteria. The pyrite contained in the reservoir rock makes up a source of sulfides capable of supplying the natural gas with H2S.Reduction of pyrite ta sulfides of the Fe,-,S type and the dissolution precipitation equilibrium, linked mainly ta C02 pressure in storage structures, make up an H2S for-mation process capable of qualitatively and quantitatively explained phenomena observed in the field.A simplified storage model reflects this scheme and can be used ta test the sensi-tivity of the H2S content ta the value of the physical and chemical parameters defining the storage structure.This investigation can be used to propose various means of action (sable ta "mit H2S formation and ta guide future choices of natural gas/storage-structure pairs.

  14. Duplex detection of the Mycobacterium tuberculosis complex and medically important non-tuberculosis mycobacteria by real-time PCR based on the rnpB gene.

    Science.gov (United States)

    Abdeldaim, Guma; Svensson, Erik; Blomberg, Jonas; Herrmann, Björn

    2016-11-01

    A duplex real-time PCR based on the rnpB gene was developed for Mycobacterium spp. The assay was specific for the Mycobacterium tuberculosis complex (MTB) and also detected all 19 tested species of non-tuberculous mycobacteria (NTM). The assay was evaluated on 404 clinical samples: 290 respiratory samples and 114 from tissue and other non-respiratory body sites. M. tuberculosis was detected by culture in 40 samples and in 30 samples by the assay. The MTB assay showed a sensitivity similar to Roche Cobas Amplicor MTB-PCR (Roche Molecular Systems, Pleasanton, CA, USA). There were only nine samples with non-tuberculous mycobacteria detected by culture. Six of them were detected by the PCR assay.

  15. Potential applications of oral brush cytology with liquid-based technology: results from a cohort of normal oral mucosa.

    Science.gov (United States)

    Kujan, Omar; Desai, Mina; Sargent, Alexandra; Bailey, Andrew; Turner, Andrew; Sloan, Philip

    2006-09-01

    Fifty healthy volunteers were studied to assess the potential applications of oral brush sampling using liquid-based cytology. Three specimens from the buccal mucosa and lateral border of tongue were collected from each subject by using cervical brushes and brooms. The brush was immersed in a preservative fluid. The sample in the preservative fluid was processed according to the manufacturer's directions (SurePath, UK). Slides were stained by the Papanicolaou method and assessed for squamous cell adequacy by the same criteria used for cervical cytology screening. Immunocytochemical staining for FHIT (Fragile Histidine Triad) was applied in liquid-based preparations following the streptavidin-biotin-peroxidase method. Human papillomavirus (HPV) detection was performed using the Hybrid Capture 2 assay (Digene) and the PCR-based Roche AMPLICOR HPV Test. LBC preparation slides showed good sample preservation, specimen adequacy and visualization of cell morphology. Interestingly, nine cases showed borderline cytological abnormalities from apparently normal oral mucosa. All cases showed good quality positive FHIT immunoreactivity staining. All studied cases were high-risk HPV negative using HC2 assay method. However, the AMPLICOR Roche Test detected four samples with positive results for high-risk HPVs. Liquid-based cytology has potential as a screening tool for oral cancer and precancer. The method may also have applications for research and practice in the field of oral cancer and precancer. However a special custom-designed oral cytobrush is required.

  16. Approche numérique et quantitative de l'étude sur clichés aériens de la fracturation des réservoirs en roches fissurées Numerical and Quantitative Approach to Investigating Fracture Maps of Fissured Reservoirs from Airphotos

    Directory of Open Access Journals (Sweden)

    Razack M.

    2006-11-01

    Full Text Available Dans le cadre de la détermination de la structure des réservoirs en roches fissurées, une méthodologie de traitement numérique et quantitative de la fractu-ration relevée sur clichés aériens a été mise au point. La numérisation du relevé est obtenue par digitalisation sur un lecteur de courbes. Cette information est ensuite traitée à l'aide d'un algorithme (programme RAFRAC qui permet d'identifier numériquement la fracturation par un ensemble de para-mètres élémentaires (orientation, longueur , densité... à partir desquels il devient possible de procéder à une analyse approfondie du champ de fractures considéré. Un exemple d'application est présenté à propos de l'étude de la fracturation d'une zone à structure tabulaire (Causse du Larzac. Ces premiers résultats tendent à mettre en évidence une double nature mathématique de l'information analysée aléatoire d'une part, déterministe d'autre part. On montre également, à partir de la théorie desvariables régionalisées, que la fracturation suit une certaine logique dans sa répartition spatiale. Par ailleurs une organisation des familles de fractures a pu être mise en évidence, sur laquelle la structure géométrique du réservoir sous-jacent s'ajuste de façon très proche. As part of efforts ta determine the structure of reservoirs in fissured rocks, a numerical and quantitative processing methodology has been developed for mapping fractures with airphotos. The survey is digitized on a curve reader. This data is then processed by means of an algorithm (RAFRAC program sa as ta numerically identify fracturing by a set of elementary parameters (direction, length, density, etc. which con be used ta make an in-depth analysis of the fracture field being considered. A sample application is described having ta do with the surveying of the fracturing in a tabular structure (Causse plateau of Larzac. These initial results tend to reveol a dual mathematical nature

  17. Rock Permeability and Fluid Pressure At the Ktb. Implications from Laboratory-And Drill Hole-Measurements Perméabilité des roches et pression dans le KTB : enseignements tirés des mesures de laboratoire et des mesures en puits

    Directory of Open Access Journals (Sweden)

    Zimmermann G.

    2006-12-01

    Full Text Available Rock permeability and the fluid pressure were investigated at different scales at the two drill holes of the Continental Deep Drilling Program (KTB. Drill hole tests and fluid inclusion investigations both implicate the existence of hydrostatic fluid pressure in situ with respect to salinity of the formation fluid. Matrix permeability and in situ values from hydraulic tests differ up to three decades with higher values in situ. Further on, the pressure dependence of core permeability and in situ determined values differ significantly. All these observed effects support the well known theory of scale variance. This conclusion is supported by observations of hydraulic communications between both drill holes. These scale effects implicate a pronounced hydraulic heterogeneity of the KTB surroundings. Therefore, stochastic network modelling with parameters derived from structural borehole measurements and under the consideration of the observed permeabilities were performed. Under the presumption of existing driving forces fluid transport takes place dominantly on discrete connected pathways characterised by fracture width, fracture length and fracture orientation and is subordinate in the rock matrix. La perméabilité des roches et la pression des fluides ont été étudiées à différentes échelles sur les deux forages du Programme continental de forage profond - Continental Deep Drilling Program (KTB. Les essais de puits et les recherches d'inclusions de fluides impliquent l'existence d'une pression de fluide fonction de la salinité du fluide de formation. Les valeurs déduites des essais de puits dépassent largement les perméabilités matricielles, l'écart allant jusqu'à trois ordres de grandeur. De plus, l'évolution de la perméabilité mesurée sur échantillon en fonction de la pression et celle déterminée in situ diffèrent largement. Ces observations renforcent la théorie bien connue des effets d'échelle. Cette conclusion est

  18. Propagation des ondes élastiques dans les matériaux non linéaires Aperçu des résultats de laboratoire obtenus sur les roches et des applications possibles en géophysique Propagation of Elastic Waves in Nonlinear Materials Survey of Laboratory Results on Rock and Geophysical Applications

    Directory of Open Access Journals (Sweden)

    Rasolofosaon P.

    2006-12-01

    Full Text Available Les roches présentent souvent un comportement élastique nettement non linéaire, entraînant des conséquences importantes sur la propagation des ondes. Cette non-linéarité élastique est surtout causée par les microdéfauts mécaniques ubiquistes (microfissures, joints de grains, macles, etc. dont la rigidité varie sous l'effet de la contrainte. Ce sujet fait l'objet d'études de plus en plus nombreuses. Nous nous proposons de présenter très sommairement les bases théoriques et les résultats expérimentaux permettant d'avoir un ordre de grandeur des effets caractéristiques observés dans les roches afin de pouvoir proposer une approche critique des possibilités d'applications en géophysique. Deux disciplines se sont développées en parallèle à partir du même principe physique et avec des formalismes très proches : - L'acousto-élasticité étudie l'effet des précontraintes statiques sur les vitesses de propagation des ondes élastiques. On dispose d'un formalisme mécanique élaboré permettant de relier quantitativement variation de contrainte et variation de vitesse élastique (par exemple pour ce qui concerne l'anisotropie acoustique induite par un état de contrainte et d'une méthode expérimentale de mesure des coefficients de non-linéarité. - L'acoustique non linéaire s'intéresse aux conséquences de la variation des modules élastiques au passage d'une onde qui ne peut plus être considérée comme une petite perturbation, mais qui induit localement des modifications mesurables du milieu de propagation ; modifications entraînant l'apparition de phénomènes inconnus en acoustique linéaire tels que la génération d'harmoniques et l'interaction onde-onde. Les applications à la sismique pétrolière semblent fort lointaines puisque, avec les méthodes classiques de surface ou de puits, il y a peu d'espoir de réussir à faire propager jusqu'aux couches profondes des ondes dont l'amplitude dépasserait le seuil de

  19. Evolution of the Petrophysical and Mineralogical Properties of Two Reservoir Rocks Under Thermodynamic Conditions Relevant for CO2 Geological Storage at 3 km Depth Évolution des propriétés physiques et minéralogiques de deux roches réservoirs dans des conditions thermodynamiques correspondant à un stockage géologique de CO2 à 3 km de profondeur

    Directory of Open Access Journals (Sweden)

    Rimmelé G.

    2009-11-01

    est considérée comme une solution pour contribuer à la réduction des émissions de gaz à effet de serre dans l’atmosphère. Les interactions entre le CO2 supercritique et la roche-réservoir potentielle doivent être étudiées en détail en conditions de stockage géologique. Quarante échantillons de calcaire de Lavoux et de grès d’Adamswiller, provenant de roches réservoirs du bassin parisien, ont été expérimentalement exposés au CO2 dans un autoclave spécialement construit pour reproduire les conditions thermodynamiques d’un réservoir de stockage de CO2. Les deux types de roches ont été exposés pendant un mois à du CO2 supercritique humide et à de l’eau saturée en CO2, à 28 MPa et 90 °C, ce qui correspond à des conditions d’enfouissement de 3 km de profondeur. L’évolution de leurs propriétés minéralogiques a été suivie par des analyses par diffraction des rayons X, par spectroscopie Raman et par microscopie électronique couplée à un système de microanalyses X. Leurs propriétés physiques et microtexturales ont été estimées en mesurant, avant et après les expériences, le poids, la densité, les propriétés mécaniques, la perméabilité, la porosité globale et la présence d’éventuels gradients de porosité de chaque échantillon. Les résultats montrent que les deux roches ont préservé leurs propriétés mécaniques et minéralogiques, malgré une augmentation de la porosité et de la perméabilité. Des zones microscopiques de dissolution de la calcite observées dans le calcaire sont vraisemblablement responsables de cette augmentation de la perméabilité et de la porosité. Dans le grès, une altération de la pétro-fabrique est supposée se produire due à la réaction des minéraux argileux avec le CO2. Tous les échantillons du calcaire de Lavoux et du grès d’Adamswiller ont montré une altération mesurable dans le CO2 humide et dans l’eau chargée en CO2. Ces expériences en autoclave sont

  20. Impact of Diagenetic Alterations on the Petrophysical and Multiphase Flow Properties of Carbonate Rocks Using a Reactive Pore Network Modeling Approach Impact des altérations diagénétiques sur les propriétés pétrophysiques et d’écoulement polyphasique de roches carbonates en utilisant une modélisation par l’approche réseau de pores

    Directory of Open Access Journals (Sweden)

    Algive L.

    2012-02-01

    replacing the original complex pore structure of real porous media by a conceptual network. The second step consists of resolving the governing equations of the precipitation and dissolution phenomena (i.e. reactive convection diffusion equation in the conceptual 3D pore network and deducing the local reactive fluxes and the motion of the fluid-solid interface. The third step consists of updating the new pore structure and calculating the new petrophysical properties of the modified porous media. Those steps are repeated in order to mimic a given diagenetic scenario. Finally, the multiphase flow properties of the current porous media are calculated. The impact of one diagenetic cycle of dissolution and precipitation on the pore networks’ heterogeneity and consequently on the petrophysical properties (i.e. porosity and permeability and multiphase flow properties (i.e. relative permeability and capillary pressure have been investigated. The permeability and porosity evolution during a given diagenetic cycle are calculated and analyzed as a function of the relevant dimensionless numbers (Peclet and Damköhler numbers that characterize the flow and reaction regime. The correlation between these numbers and the dissolved/precipitated layer thickness distribution is investigated. This work contributes to improve the understanding of the impact of dissolution and precipitation on permeability and porosity modification. Using the PNM approach, multiphase flow properties and permeability-porosity relationship have been determined for different reactive flow regimes. These relationships are relevant input data to improve the quality of reservoir simulation predictions. Les roches sédimentaires présentent souvent une structure porale hétérogène qui est intrinsèquement liée à la texture de la roche d’origine et aux modifications diagénétiques subies. Ces altérations sont régies par la texture de la roche d’origine, les fluides impliqués (et les interactions rock

  1. Impact of HIV-1 genetic diversity on plasma HIV-1 RNA Quantification: usefulness of the Agence Nationale de Recherches sur le SIDA second-generation long terminal repeat-based real-time reverse transcriptase polymerase chain reaction test.

    Science.gov (United States)

    Rouet, François; Chaix, Marie-Laure; Nerrienet, Eric; Ngo-Giang-Huong, Nicole; Plantier, Jean-Christophe; Burgard, Marianne; Peeters, Martine; Damond, Florence; Ekouevi, Didier Koumavi; Msellati, Philippe; Ferradini, Laurent; Rukobo, Sandra; Maréchal, Valérie; Schvachsa, Nilda; Wakrim, Lahcen; Rafalimanana, Christian; Rakotoambinina, Benjamin; Viard, Jean-Paul; Seigneurin, Jean-Marie; Rouzioux, Christine

    2007-08-01

    The high genetic diversity of HIV-1 has a major impact on the quantification of plasma HIV-1 RNA, representing an increasingly difficult challenge. A total of 898 plasma specimens positive for HIV-1 RNA by commercial assays (Amplicor v1.5; Roche Diagnostic Systems, Alameda, CA or Versant v3.0; Bayer Diagnostics, Emeryville, CA) were tested using the Agence Nationale de Recherches sur le SIDA second-generation (G2) real-time reverse transcriptase polymerase chain reaction (RT-PCR) test: 518 samples containing HIV-1 of known subtype, including 88 from 2 subtype panels and 430 harboring B (n = 266) and non-B (n = 164) group M HIV-1 subtypes from patients followed up in 2002 through 2005 at Necker Hospital (Paris, France), and 380 samples from 10 different countries (Argentina, Cambodia, Cameroon, Central African Republic, France, Ivory Coast, Madagascar, Morocco, Thailand, and Zimbabwe). HIV-1 RNA values obtained by G2 real-time PCR were highly correlated with those obtained by the Amplicor v1.5 for B and non-B subtypes (R = 0.892 and 0.892, respectively) and for samples from diverse countries (R = 0.867 and 0.893 for real-time PCR vs. Amplicor v1.5 and real-time PCR vs. Versant v3.0, respectively). Approximately 30% of specimens harboring non-B subtypes were underquantified by at least -0.51 log10 in Amplicor v1.5 versus 5% underquantified in G2 real-time PCR. Discrepant results were also obtained with subtype B samples (14% underquantified by Amplicor v1.5 vs. 7% by G2 real-time PCR). Similar percentages were observed when comparing results obtained with the G2 real-time PCR assay with those obtained using the Versant assay. Addressing HIV-1 diversity, continual monitoring of HIV-1 RNA assays, together with molecular epidemiology studies, is required to improve the accuracy of all HIV RNA assays.

  2. Strategy for the maximization of clinically relevant information from hepatitis C virus, RT-PCR quantification.

    LENUS (Irish Health Repository)

    Levis, J

    2012-02-03

    BACKGROUND: The increasing clinical application of viral load assays for monitoring viral infections has been an incentive for the development of standardized tests for the hepatitis C virus. OBJECTIVE: To develop a simple model for the prediction of baseline viral load in individuals infected with the hepatitis C virus. METHODOLOGY: Viral load quantification of each patient\\'s first sample was assessed by RT-PCR-ELISA using the Roche MONITOR assay in triplicate. Genotype of the infecting virus was identified by reverse line probe hybridization, using amplicons resulting from the qualitative HCV Roche AMPLICOR assay. RESULTS: Retrospective evaluation of first quantitative values suggested that 82.4% (n=168\\/204) of individuals had a viral load between 4.3 and 6.7 log(10) viral copies per ml. A few patients (3.4%; n=7\\/204) have a serum viremia less than the lower limit of the linear range of the RT-PCR assay. Subsequent, prospective evaluation of hepatitis C viral load of all new patients using a model based on the dynamic range of viral load in the retrospective group correctly predicted the dynamic range in 75.9% (n=33\\/54). CONCLUSION: The dynamic range of hepatitis C viremia extends beyond the linear range of the Roche MONITOR assay. Accurate determination of serum viremia is substantially improved by dilution of specimens prior to quantification.

  3. Impact of occult HBV infection in HIV/HCV co-infected patients: HBV-DNA detection in liver specimens and in serum samples.

    Science.gov (United States)

    Fabris, Paolo; Biasin, Maria R; Giordani, Maria T; Berardo, Laura; Menini, Vania; Carlotto, Antonio; Miotti, Maria G; Manfrin, Vinicio; Baldo, Vincenzo; Nebbia, Gaia; Infantolino, Domenico

    2008-03-01

    Prevalence and impact of occult HBV infection in HIV positive patients is controversial. The aims of this study were to determine the prevalence of occult HBV infection and its impact on histological and virological parameters. 52 HIV/HCV (but HBsAg-negative) co-infected patients, 29 HBsAg and anti-HCV negative chronic hepatitis, and 20 HBsAg positive chronic hepatitis controls were studied. DNA was extracted from frozen biopsies and amplified with primers for S, C and X regions, and for (ccc) HBV-DNA. Sera were tested for HBV-DNA with two quantitative assays (Cobas Amplicor HBV Monitor, and the real-time COBAS (r) Taqman HBV Test, Roche Diagnostics, UK). Occult HBV infection was detected in 7 (13.4%) liver biopsies of the study group, and in none case of the non viral chronic hepatitis group (p=0.04). All serum samples were HBV-DNA negative with Cobas Amplicor HBV monitor assay, while 3 cases were found positive with real time PCR. Statistical analysis didn't show any impact of occult HBV infection on liver histology, CD4+ cells count, HIV and HCV load, and ALT levels. Occult B infection is relatively frequent in HIV/HCV co-infected patients, and is underestimated by common HBV-DNA serological assays. However, it doesn't seem to exert a relevant impact.

  4. Global cost modeling analysis of HIV-1 and HCV viral load assays.

    Science.gov (United States)

    Elbeik, Tarek; Chen, Yi-Ming Arthur; Soutchkov, Serguei V; Loftus, Richard A; Beringer, Scott

    2003-08-01

    This review addresses hidden costs associated with the Bayer VERSANT assay, Roche AMPLICOR MONITOR test and COBAS AMPLICOR MONITOR test and how these influence the final per reportable cost to a testing laboratory in resource-rich and -poor countries. An in-depth evaluation and recommendation of the most cost-effective approach for these tests is presented. The analyses demonstrate the need for manufacturers to consider labor and supply costs when marketing a kit in resource-poor countries, noting that marketing strategies need to change. In the absence of any proven monitoring alternative, emphasis is placed on increasing market share to promote significant reduction in kit prices to suit the demands of markets in resource-poor countries. Finally, recommendations are made to improve the overall cost structure of viral load testing. This review is intended as a tool to optimize assay usage in attaining the lowest performance costs by assay and is not to endorse any test, as will become apparent.

  5. The Usefulness of Defining Rapid Virological Response by a Very Sensitive Assay (TMA) during Treatment of HCV Genotype 2/3 Infection

    DEFF Research Database (Denmark)

    Dalgard, Olav; Martinot-Peignoux, Michelle; Verbaan, Hans;

    2015-01-01

    The aim of this study was to determine in patients with HCV genotype 2 or 3 the performance at week 4 of two assays with different sensitivities for HCV RNA detection, for the prediction of SVR and stratification for treatment duration (14 and 24 weeks). Recruitment was from two trials comparing 14...... and 24 weeks treatment to patients with rapid virological response (RVR) (n = 550). RVR was originally defined as HCV RNA HCV-RNA was prospectively...... measured with COBAS Amplicor V2, Roche (CA) (lower detection limit 50 IU/ml) and retrospectively assessed with VERSANT HCV-RNA Qualitative Assay, Siemens (TMA) (lower limit detection 10 IU/ml). Genotype 3 was present in 80% and genotype 2 in 20%. A SVR was achieved in 82%. At week 4 HCV...

  6. Prevalence of Chlamydia infection among women visiting a gynaecology outpatient department: evaluation of an in-house PCR assay for detection of Chlamydia trachomatis

    Directory of Open Access Journals (Sweden)

    Patel Achchhe L

    2010-09-01

    Full Text Available Abstract Background Screening women for Chlamydia trachomatis infection in developing countries is highly desirable because of asymptomatic infection. The existing diagnostic methods in developing countries are not effective and their sensitivity fall below 45.0% which leads to further spread of infection. There is an urgent need for improved and cost effective diagnostic tests that will reduce the burden of sexually transmitted infections in the developing world. Methods Prevalence of C. trachomatis infection among women visiting gynaecology department of Hindu Rao hospital in Delhi, India was determined using Roche Amplicor Multi Well Plate kit (MWP as well as using in-house PCR assay. We used 593 endocervical swabs for clinical evaluation of the in-house developed assay against Direct Fluorescence Assay (DFA; Group I n = 274 and Roche Amplicor MWP kit (Group II, n = 319 samples and determined the sensitivity, specificity, positive predictive value (PPV, negative predictive value (NPV of the in-house developed assay. Results We detected 23.0% positive cases and there was a higher representation of women aged 18-33 in this group. An in-house PCR assay was developed and evaluated by targeting unique sequence within the gyrA gene of C. trachomatis. Specificity of the reaction was confirmed by using genomic DNA of human and other STI related microorganisms as template. Assay is highly sensitive and can detect as low as 10 fg of C. trachomatis DNA. The resolved sensitivity of in-house PCR was 94.5% compared with 88.0% of DFA assay. The high specificity (98.4% and sensitivity (97.1% of the in-house assay against Roche kit and availability of test results within 3 hours allowed for immediate treatment and reduced the risk of potential onward transmission. Conclusions The in-house PCR method is cost effective (~ 20.0% of Roche assay and hence could be a better alternative for routine diagnosis of genital infection by C. trachomatis to facilitate

  7. H08117: NOS Hydrographic Survey , Roche Harbor and Mosquito Pass, Washington, 1959-04-28

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The National Oceanic and Atmospheric Administration (NOAA) has the statutory mandate to collect hydrographic data in support of nautical chart compilation for safe...

  8. Roche genome sequencer FLX based high-throughput sequencing of ancient DNA

    DEFF Research Database (Denmark)

    Alquezar-Planas, David E; Fordyce, Sarah Louise

    2012-01-01

    Since the development of so-called "next generation" high-throughput sequencing in 2005, this technology has been applied to a variety of fields. Such applications include disease studies, evolutionary investigations, and ancient DNA. Each application requires a specialized protocol to ensure tha...

  9. H08116: NOS Hydrographic Survey , Roche Harbor and Mosquito Pass, Washington, 1954-09-13

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The National Oceanic and Atmospheric Administration (NOAA) has the statutory mandate to collect hydrographic data in support of nautical chart compilation for safe...

  10. H08115: NOS Hydrographic Survey , Roche Harbor and Mosquito Pass, Washington, 1954-06-29

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — The National Oceanic and Atmospheric Administration (NOAA) has the statutory mandate to collect hydrographic data in support of nautical chart compilation for safe...

  11. Clinical evaluation of the Roche Elecsys CMV IgG Avidity assay.

    Science.gov (United States)

    Vauloup-Fellous, C; Lazzarotto, T; Revello, M G; Grangeot-Keros, L

    2014-08-01

    Congenital cytomegalovirus (CMV) infection has potentially severe consequences in newborns. The testing of pregnant women for CMV-specific antibodies may be useful for the identification of women at risk of transmitting the infection to the fetus. The determination of CMV IgG avidity helps to establish the timing of infection as IgG avidity matures during the course of infection. This study examines the performance of the Elecsys CMV IgG Avidity assay using preselected samples from patients at different phases of CMV infection. The Elecsys CMV IgG Avidity assay was tested at three sites using sequential samples from patients with recent primary CMV infection, as well as single samples from patients with recent primary or past CMV infection. The Elecsys assay discriminated well between early (low avidity) and late (high avidity) phases of infection in sequential serum samples. Overall, 98.8% of low-avidity samples corresponded to infection onset 90 days before sampling. The assay's sensitivity was 90-97%, with specificity ranging from 89 to 100%, depending on the consideration of gray-zone avidity values. Single samples from recent primary or past infection showed similar distributions of avidity results. The Elecsys CMV IgG Avidity assay results are in agreement with preselected samples from patients with primary or past CMV infection, showing that the test is an adequate predictor of the phase of infection.

  12. Supersymmetric Proof of the Hirzebruch-Riemann-Roch Theorem for Non-Kähler Manifolds

    Directory of Open Access Journals (Sweden)

    Andrei V. Smilga

    2012-01-01

    Full Text Available We present the proof of the HRR theorem for a generic complex compact manifold by evaluating the functional integral for the Witten index of the appropriate supersymmetric quantum mechanical system.

  13. Defending the Freedom to Innovate: Faculty Intellectual Property Rights after "Stanford v. Roche"

    Science.gov (United States)

    American Association of University Professors, 2014

    2014-01-01

    Tensions over faculty control of the fruits of their scholarship have been slowly building since the 1980s, but they have also intensified since late 2011. There have long been differences of opinion over ownership of patentable inventions, but over the last two years a number of universities have categorically asserted that they own these…

  14. Cross-reactivity of amphetamine analogues with Roche Abuscreen radioimmunoassay reagents

    Energy Technology Data Exchange (ETDEWEB)

    Cody, J.T. (Air Force Drug Testing Laboratory, Brooks AFB, TX (USA))

    1990-01-01

    Cross-reactivity of amphetamine analogues with the Abuscreen amphetamine radioimmunoassay reagents was determined for both the standard and high specificity antibody systems. Compounds tested included 2-methoxyamphetamine, 4-hydroxymethamphetamine, 2,5-dimethoxyamphetamine (DMA), 4-bromo-2,5-dimethoxyamphetamine (DOB), 4-bromo-2,5-dimethoxy-beta-phenethylamine (BDMPEA), 3,4,5-trimethoxyamphetamine (TMA), 3,4-methylenedioxyamphetamine (MDA), N,N-dimethyl-3,4-methylenedioxyamphetamine and N-hydroxy-3,4-methylenedioxyamphetamine (N-OH MDA), 3,4-methylenedioxymethamphetamine (MDMA), 3,4-methylenedioxyethylamphetamine (MDEA), 2,5-dimethoxy-4-ethylamphetamine, 2,5-dimethoxy-4-methylamphetamine (DOM), and 3,4,5-trimethoxyphenethylamine (mescaline). Blank negative reference material was spiked with 1,000 to 100,000 ng/mL of the amphetamine analogue and used as sample in the assays. MDA was the only analogue that showed cross reactivity equal to or greater than that of amphetamine. None of the other analogue compounds demonstrated a positive result at even the highest concentration; however several showed depressed counts at various concentration levels.

  15. Tidal Interaction between a Fluid Star and a Kerr Black Hole Relativistic Roche-Riemann Model

    CERN Document Server

    Wiggins, P; Wiggins, Paul; Lai, Dong

    1999-01-01

    We present a semi-analytic study of the equilibrium models of close binary systems containing a fluid star (mass $m$ and radius $R_0$) and a Kerr black hole (mass $M$) in circular orbit. We consider the limit $M\\gg m$ where spacetime is described by the Kerr metric. The tidally deformed star is approximated by an ellipsoid, and satisfies the polytropic equation of state. The models also include fluid motion in the stellar interior, allowing binary models with nonsynchronized stellar spin (as expected for coalescing neutron star--black hole binaries) to be constructed. Tidal disruption occurs at orbital radius $r_{\\rm tide}\\sim R_0(M/m)^{1/3}$, but the dimensionless ratio of the black hole as well as on the equation of state and the internal rotation of the star. We find that the general relativistic tidal field disrupts the star at a larger $\\hat r_{\\rm tide}$ than the Newtonian tide; the difference is particularly prominent if the disruption occurs in the vicinity of the black hole's horizon. In general, $\\h...

  16. Real-time PCR per HBV DNA: valutazione del nuovo sistema automatizzato COBAS AMPLIPREP™/COBAS TAQMAN™ HBV

    Directory of Open Access Journals (Sweden)

    Tiziano Allice

    2007-12-01

    Full Text Available Success of antiviral therapy for chronic hepatitis B is supported by highly sensitive PCR-based assays for Hepatitis B virus (HBV DNA. Nucleic acid extraction from biologic specimens is technically demanding and reliable PCR results depend it. Performances of the fully automatic system COBAS AmpliPrep™/COBAS TaqMan™ 48 (CAP/CTM (Roche, Branchburg, NJ for HBV DNA extraction and real -time PCR quantification were assessed and compared with the end-point PCR COBAS AMPLICOR HBV Monitor (CAHBM, Roche. Analytical evaluation with a proficiency panel showed that CAP/CTM quantitated HBV DNA levels in one single run over a wide dynamic range (7 logs with a close correlation between expected and observed values (r=0.976, interassay variability below 5%. Clinical evaluation as tested with samples from 92 HBsAg-positive patients, demonstrated excellent correlation with CAHBM (r=0.966, mean difference in quantitation: 0.36 log10 IU/ml. CAP/CTM detected 10% more viremic patients and longer period of residual viremia in those on therapy. In lamivudine (LAM-resistant patients, reduction of HBV DNA after 12 months of Adefovir (ADF was higher in the combination (LAM+ADF schedule than in ADF monotherapy (5.1 vs. 3.5 logs suggesting a benefit in continuing LAM. In conclusion,CAP/CTM can improve the management of HBV infection, the assessment of antiviral therapy and drug resistance, supporting further insights in the emerging area of drug resistance.

  17. Evaluation of a single round polymerase chain reaction assay using dried blood spots for diagnosis of HIV-1 infection in infants in an African setting

    Directory of Open Access Journals (Sweden)

    Ng'ayo Musa

    2011-02-01

    Full Text Available Abstract Background The aim of this study was to develop an economical 'in-house' single round polymerase chain reaction (PCR assay using filter paper-dried blood spots (FP-DBS for early infant HIV-1 diagnosis and to evaluate its performance in an African setting. Methods An 'in-house' single round PCR assay that targets conserved regions in the HIV-1 polymerase (pol gene was validated for use with FP-DBS; first we validated this assay using FP-DBS spiked with cell standards of known HIV-1 copy numbers. Next, we validated the assay by testing the archived FP-DBS (N = 115 from infants of known HIV-1 infection status. Subsequently this 'in-house' HIV-1 pol PCR FP-DBS assay was then established in Nairobi, Kenya for further evaluation on freshly collected FP-DBS (N = 186 from infants, and compared with findings from a reference laboratory using the Roche Amplicor® HIV-1 DNA Test, version 1.5 assay. Results The HIV-1 pol PCR FP-DBS assay could detect one HIV-1 proviral copy in 38.7% of tests, 2 copies in 46.9% of tests, 5 copies in 72.5% of tests and 10 copies in 98.1% of tests performed with spiked samples. Using the archived FP-DBS samples from infants of known infection status, this assay was 92.8% sensitive and 98.3% specific for HIV-1 infant diagnosis. Using 186 FP-DBS collected from infants recently defined as HIV-1 positive using the commercially available Roche Amplicor v1.5 assay, 178 FP-DBS tested positive by this 'in-house' single-round HIV-1 pol PCR FP-DBS PCR assay. Upon subsequent retesting, the 8 infant FP-DBS samples that were discordant were confirmed as HIV-1 negative by both assays using a second blood sample. Conclusions HIV-1 was detected with high sensitivity and specificity using both archived and more recently collected samples. This suggests that this 'in-house' HIV-1 pol FP-DBS PCR assay can provide an alternative cost-effective, reliable and rapid method for early detection of HIV-1 infection in infants.

  18. Analytical performance of the Roche LightCycler® Mycobacterium Detection Kit for the diagnosis of clinically important mycobacterial species.

    Directory of Open Access Journals (Sweden)

    Shaheed V Omar

    Full Text Available BACKGROUND: The LightCycler® Mycobacterium Detection Kit based on real-time PCR technology for the detection of Mycobacterium tuberculosis, Mycobacterium avium and Mycobacterium kansasii was recently developed. This study evaluated its analytical sensitivity, specificity and reproducibility. METHODOLOGY/PRINCIPAL FINDINGS: Plasmid standards were prepared and used to determine the limit of detection. The assay was also performed against organisms other than mycobacteria, other mycobacterial strains and interfering substances to exclude cross-reactivity and interference. Reference standards were prepared and tested to assess the assay's reproducibility. All PCR assays were performed using the LightCycler® 2.0 Instrument. The detection limit for M. tuberculosis was 28 copies per microlitre. Neither cross-reactivity nor interference occurred with non-mycobacterial organisms and substances tested. Overall reproducibility for consecutive measurements, run-to-run, lot-to-lot, day-to-day and laboratory-to-laboratory achieved a coefficient of variance of less than two percent. SIGNIFICANCE: The LightCycler® Mycobacterium Detection kit has shown to be a robust and accurate assay with the potential to be used as a rapid TB diagnostic test.

  19. Analysis of heavy oils flows in saturated rocks; Analyse des ecoulements d'huiles lourdes dans les roches saturees

    Energy Technology Data Exchange (ETDEWEB)

    Luc Dormieux; Denis Garnier [Ecole Nationale des Ponts et Chaussees, 6 et 8 avenue Blaise Pascal Cite Descartes - Champs/Marne, 77455 Marne la Vallee Cedex 2, (France); Thierry Yalamas; Elisabeth Bemer; Jean-Francois Nauroy [Institut Francais du Petrole 1 et 4 avenue de Bois-Preau, 92852 Rueil-Malmaison Cedex, (France)

    2005-07-01

    In heavy oil reservoirs, the fluid is a viscous material, possibly nonlinear. In order to describe the flow of such oils in the rock, an extension of Darcy law to non Newtonian fluids is presented. Besides, oil production in this type of reservoir is responsible for rock erosion and the formation of a paste (slurry) made up of a mixture of oil and sand grains is observed. Based on a non linear homogenization technique, a modelling of the constitutive behavior of this slurry is proposed. (authors)

  20. About Jules et Jim: Some Figures of Matriarchy from Bachofen to Truffaut via Benjamin, Roché and Hessel

    Directory of Open Access Journals (Sweden)

    Michael Hollington

    1997-05-01

    Full Text Available Cet article essaie de relever quelques aspects d'un mouvement de pensée « matriarcale » du XXe siècle, parfois plutôt souterrain, et de montrer dans quelle mesure cette pensée fait partie du contexte du grand film des années soixante de François Truffaut. Il s'agit des hypothèses de Johann Jakob Bachofen (1815-1887, juriste et archéologue suisse, qui proposait la théorie d'un matriarcat primitif à l'origine de la société humaine. Dans un premier temps, en Méditerranée par exemple, existait selon lui un système communiste où l'idée de propriété privée était absente, fondé sur l'« hétaïrisme », où les rapports sexuels, organisés selon les vœux des femmes, étaient complètement libres.The purpose of this paper is, first, to provide a brief sketch map of a comparative nature of some linked, formative appropriations in Germany and elsewhere in the early part of this century of the Swiss jurist and archaeologist Johann Jakob Bachofen (1815-1887, famous for his influential but controversial theory of the precedence of primitive matriarchy over patriarchy in the Mediterranean and elsewhere.Este artίculo trata de señalar algunos aspectos de una corriente de pensamiento "matriarcal" del siglo veinte, a veces más bien subterránea, y muestra en qué medida dicho pensamiento forma parte del contexto de la famosa película de los años sesenta de François Truffaut. Se trata de las hipótesis de Johann Jakob Bachofen (1815-1887, jurista y arqueólogo suizo, quien propuso la teoría de un matriarcado primitivo en el origen de la sociedad humana. En un primer momento, en la región mediterránea, por ejemplo, dice que existía un sistema comunista carente de la idea de propiedad privada, y basado en el "hetaerismo", en el que las relaciones sexuales, organizadas según el voto de las mujeres, eran completamente libres.

  1. Near-complete genome sequencing of swine vesicular disease virus using the Roche GS FLX sequencing platform

    DEFF Research Database (Denmark)

    Nielsen, Sandra Cathrine Abel; Bruhn, Christian Anders Wathne; Samaniego Castruita, Jose Alfredo

    2014-01-01

    Swine vesicular disease virus (SVDV) is an enterovirus that is both genetically and antigenically closely related to human coxsackievirus B5 within the Picornaviridae family. SVDV is the causative agent of a highly contagious (though rarely fatal) vesicular disease in pigs. We report a rapid method...

  2. Les roches basiques et ultrabasiques des Lacs Robert et le Trias de Chamrousse (Massif de Belledonne) Etude petrologique et geologique

    NARCIS (Netherlands)

    Tex, den E.

    1950-01-01

    La région que j’ai étudiée et relevée est située dans les Alpes françaises, à environ 4° longitude est et 50°15’ latitude nord, et à environ 2000 mètres d’altitude. Elle fait partie de la chaîne dite „chaîne de Belledonne” qui s’étend des massifs de Beaufort et du Grand Mont dans le N N E jusqu’à ce

  3. Near-complete genome sequencing of swine vesicular disease virus using the Roche GS FLX sequencing platform

    DEFF Research Database (Denmark)

    Nielsen, Sandra Cathrine Abel; Bruhn, Christian Anders Wathne; Samaniego Castruita, Jose Alfredo;

    2014-01-01

    that is suitable for sequencing the complete protein-encoding sequences of SVDV isolates in which the RNA is relatively intact. The approach couples a single PCR amplification reaction, using only a single PCR primer set to amplify the near-complete SVDV genome, with deep-sequencing using a small fraction...

  4. Genotype 3 is the predominant hepatitis C genotype in a multi-ethnic Asian population in Malaysia.

    Science.gov (United States)

    Ho, Shiaw-Hooi; Ng, Kee-Peng; Kaur, Harvinder; Goh, Khean-Lee

    2015-06-01

    Genotypes of hepatitis C virus (HCV) are distributed differently across the world. There is a paucity of such data in a multi-ethnic Asian population like Malaysia. The objectives of this study were to determine the distribution of HCV genotypes between major ethnic groups and to ascertain their association with basic demographic variables like age and gender. This was a cross-sectional prospective study conducted from September 2007 to September 2013. Consecutive patients who were detected to have anti-HCV antibodies in the University of Malaya Medical Centre were included and tested for the presence of HCV RNA using Roche Cobas Amplicor Analyzer and HCV genotype using Roche single Linear Array HCV Genotyping strip. Five hundred and ninety-six subjects were found to have positive anti-HCV antibodies during this period of time. However, only 396 (66.4%) were HCV RNA positive and included in the final analysis. Our results showed that HCV genotype 3 was the predominant genotype with overall frequency of 61.9% followed by genotypes 1 (35.9%), 2 (1.8%) and 6 (0.5%). There was a slightly higher prevalence of HCV genotype 3 among the Malays when compared to the Chinese (P=0.043). No other statistical significant differences were observed in the distribution of HCV genotypes among the major ethnic groups. There was also no association between the predominant genotypes and basic demographic variables. In a multi-ethnic Asian society in Malaysia, genotype 3 is the predominant genotype among all the major ethnic groups with genotype 1 as the second commonest genotype. Both genotypes 2 and 6 are uncommon. Neither genotype 4 nor 5 was detected. There is no identification of HCV genotype according to ethnic origin, age and gender.

  5. Lyophilized standards for the calibration of real time PCR assay for hepatitis C virus RNA

    Institute of Scientific and Technical Information of China (English)

    WANG Lu-nan; WU Jian-min; DENG Wei; SHEN Zi-yu; CHEN Wen-xiang; LI Jin-ming

    2006-01-01

    Background Since October 1997, an international standard for hepatitis C virus (HCV) nucleic acid amplification technology assay, 96/790, has been available. We compared a series of lyophilized standards with known HCV RNA concentrations against the international standard in fluorescence quantitative PCR detection.Methods A series of lyophilized sera were calibrated by ROCHE COBAS AMPLICOR HCV Monitor test against the international standard and sent to various manufacturers to analyse the samples using their own kits.Then calibration curves from the series were compared with that obtained from the external standard calibration curve with the manufacture's series.Results The standard calibration curve with the series of lyophilized serum showed an excellent correlation(R2>0.98), slope and intercept that were similar to those from the manufacture's series. When the standard calibration curve from the series of lyophilized standards were used to define the values of the given sample,lower coefficients of variation between kits from different manufactures were obtained.Conclusion The results showed that the lyophilized standards could be used to setup the standard calibration curve for clinical HCV RNA quantitative PCR detection.

  6. Single-step PCR in molecular diagnosis of hepatitis C virus infection.

    Science.gov (United States)

    Farma, E; Boeri, E; Bettini, P; Repetto, C M; McDermott, J; Lillo, F B; Varnier, O E

    1996-12-01

    The diagnostic utility of two PCR systems and three PCR detection methods for hepatitis C virus (HCV) RNA was evaluated in serum samples. A nested PCR was considered the reference assay and was compared with two single-step PCR methods: the first is based on the detection of PCR products by liquid hybridization with a 32P-end-labeled probe, and the second is the Roche Amplicor colorimetric assay using microwell plate hybridization with a specific nucleic acid probe. Using the Pelicheck HCV RNA Eurohep genotype 1 proficiency panel, our laboratory achieved medium-high levels of performance with all three methods. The highest sensitivity was, however, observed with the isotopic single-step PCR (ss-PCR) method. The analytical sensitivity of ss-PCR with isotopic detection and ss-PCR with colorimetric detection was identical to that of nested PCR, with a 100% result concordance. Comparison of ss-PCR with enzyme-linked immunosorbent and RIBA assays in the analysis of clinical samples showed a high concordance. ss-PCR methods appear more suitable for diagnostic application. Nevertheless, HCV RNA PCR cannot be considered a screening assay; it should be requested in the presence of reactive serology or specific clinical symptomatology with altered liver parameters, and it is a potential tool for the follow-up of patients with HCV infection.

  7. Persistence of hepatitis C virus in a white population: associations with human leukocyte antigen class 1.

    LENUS (Irish Health Repository)

    Fanning, Liam J

    2012-02-03

    The aim of this study was to define novel associations between human leukocyte antigen (HLA) class 1 alleles and persistence or clearance of the hepatitis C virus (HCV) in a white population. All individuals in the study were seropositive for anti-HCV antibodies. Viral status was determined by the Roche HCV Amplicor test. HLA-A, -B, -C allelic group profile was molecularly defined by reverse line probe hybridization. The strongest individual allelic group associations with persistent HCV infection were HLA A*11 (p = 0.044) and Cw*04 (p = 0.006). However, only the HLA C*04 association survived correction for multiple comparisons. Further analysis of alleles in linkage with HLA Cw*04 revealed that the haplotype HLA A*11, Cw*04 was present in 11 individuals, 10 of whom were viremic (p = 0.05). No gene dosage effect was observed. No association between HLA class 1 allelic groups and aviremia and virus load was evident in this white population. HLA B*44 is associated with low virus load in human immunodeficiency virus disease, but this association was not evident in this HCV-infected population. Novel HLA class 1 alleles associated with persistence of HCV have been identified.

  8. Validation of the Gen-Probe Aptima qualitative HIV-1 RNA assay for diagnosis of human immunodeficiency virus infection in infants.

    Science.gov (United States)

    Fiscus, Susan A; McMillion, Takesha; Nelson, Julie A E; Miller, William C

    2013-12-01

    The qualitative Roche HIV-1 DNA Amplicor assay has been used for the past 20 years to diagnose HIV infection in infants and young children but is being phased out; hence, alternative assays must be found. The Gen-Probe Aptima qualitative HIV-1 RNA assay is currently the only FDA-cleared HIV-1 nucleic acid assay approved for diagnosis, but data on the use of this assay with infant plasma are limited. We assessed Aptima's performance using control material for reproducibility and limit of detection and 394 plasma samples (0.2 to 0.5 ml) from HIV-exposed infected and uninfected infants and children for analytical sensitivity and specificity. Assays to assess within-run repeatability and between-run reproducibility indicated that the controls with 10,000 (5 of 5), 200 (5 of 5), 100 (16 of 16), 50 (12 of 12), and 25 (20 of 20) HIV-1 RNA copies/ml (cp/ml) were always positive, and negatives were always negative (20 of 20). The limit of detection was 14 cp/ml, as determined by probit analysis. The analytic sensitivity of the assay was 99.5% (189/190 samples; 95% confidence interval [CI], 97.1 to 99.9%) and specificity was 99.5% (199/200 samples; 95% CI, 97.2 to 99.9%). These results suggest that the assay is suitable for early infant diagnosis of HIV-1.

  9. Sieroprevalenza di infezione da HBV e HCV tra pazienti in dialisi

    Directory of Open Access Journals (Sweden)

    Rosa Anna Leone

    2003-12-01

    Full Text Available The aim of the present study was to investigate the seroprevalence of HBV and HCV among dialysis patients in the Lamezia Terme (CZ area during the period 1999-2002. Sera from 63 patients in haemodialysis (HD and 10 patients in peritoneal dialysis (PD were analyzed with a follow-up every three months for HBsAg, HBcAb, HBsAb, anti-HCV and anti-HIV (Elisa Test,AxSYM,Abbott;we analyzed reactive sera for anti-HCV by using supplemental test (RIBA Test, Ortho; we also looked for viremia (RT-PCR Amplicor, Roche Diagnostics and HCV genotypes (Inno-Lipa HCV II, Innogenetics.The results show that, among the HD patients, 3 were HBsAg positive (Chronic Infection and 7 HBcAb and HBsAb positive/HBsAg negative (Passed Infection; 14 individuals were anti-HCV positive. No patients in PD were positive for HBV and HCV markers.The prevalence of chronic HBV infection was 4.8% (instead of 3% in other Dialysis Units, that of anti-HCV positive was 22% (in others 24%- 33%; among anti-HCV positive patients, the HCV-RNA prevalence was 79% (instead of 80%; the most recurrent HCV genotype was 2a/2c (instead of 1b in general population.These findings lead us to hypothesize that the environmental transmission in the dialysis setting is tightly correlated to the risk of HBV and HCV infection.

  10. Diagnosis of Neisseria gonorrhoeae Using Molecular Beacon

    Science.gov (United States)

    Patel, Achchhe Lal; Sonkar, Subash Chandra; Kumari, Indu; Saluja, Daman

    2015-01-01

    Neisseria gonorrhoeae is an important sexually transmitted diseases (STD) causing pathogen worldwide. Due to absence of an affordable diagnostic assay, routine screening of gonococcal infection becomes impossible in developing countries where infection rates are maximum. Treatment is given on the basis of symptoms alone which leads to spread of infection. Thus, development of a rapid, sensitive, specific, and PCR based visual diagnostic assay suitable for developing countries, required for better disease management, is aimed at in present study. Endocervical swabs were collected from patients visiting gynecology department of various hospitals in Delhi. In-house PCR based assay was developed and modified to visual assay using molecular beacon for end-point detection. It was evaluated against Roche AMPLICOR NG kit and rmp gene. Specificity of beacon was confirmed by competition experiments. Diagnostic test was 98.21% specific and 99.59% sensitive whereas negative and positive predicted value were 99.40% and 98.78%, respectively. We also observed that twice the concentration (2X) of premix was stable at 4°C for 4 months and dry swab samples gave concordant results with that of wet swabs. These features make the test best suitable for routine diagnosis of genital infections in developing countries. PMID:25802857

  11. Single genome amplification of proviral HIV-1 DNA from dried blood spot specimens collected during early infant screening programs in Lusaka, Zambia.

    Science.gov (United States)

    Seu, Lillian; Mwape, Innocent; Guffey, M Bradford

    2014-07-01

    The ability to evaluate individual HIV-1 virions from the quasispecies of vertically infected infants was evaluated in a field setting at the Centre for Infectious Disease Research in Zambia. Infant heel-prick blood specimens were spotted onto dried blood spot (DBS) filter paper cards at government health clinics. Nucleic acid was extracted and used as a template for HIV-1 proviral DNA detection by a commercial Amplicor HIV-1 PCR test (Roche, version 1.5). On samples that tested positive by commercial diagnostic assay, amplification of DNA was performed using an in-house assay of the 5' and 3' region of the HIV-1 genome. Additionally, fragments covering 1200 nucleotides within pol (full length protease and partial reverse transcriptase) and 1400 nucleotides within env (variable 1-variable 5 region) were further analyzed by single genome amplification (SGA). In summary, we have demonstrated an in-house assay for amplifying the 5' and 3' proviral HIV-1 DNA as well as pol and env proviral DNA fragments from DBS cards collected and analyzed entirely in Zambia. In conclusion, this study shows the feasibility of utilizing DBS cards to amplify the whole proviral HIV-1 genome as well as perform SGA on key HIV-1 genes.

  12. Diagnosis of Neisseria gonorrhoeae Using Molecular Beacon

    Directory of Open Access Journals (Sweden)

    Divya Sachdev

    2015-01-01

    Full Text Available Neisseria gonorrhoeae is an important sexually transmitted diseases (STD causing pathogen worldwide. Due to absence of an affordable diagnostic assay, routine screening of gonococcal infection becomes impossible in developing countries where infection rates are maximum. Treatment is given on the basis of symptoms alone which leads to spread of infection. Thus, development of a rapid, sensitive, specific, and PCR based visual diagnostic assay suitable for developing countries, required for better disease management, is aimed at in present study. Endocervical swabs were collected from patients visiting gynecology department of various hospitals in Delhi. In-house PCR based assay was developed and modified to visual assay using molecular beacon for end-point detection. It was evaluated against Roche AMPLICOR NG kit and rmp gene. Specificity of beacon was confirmed by competition experiments. Diagnostic test was 98.21% specific and 99.59% sensitive whereas negative and positive predicted value were 99.40% and 98.78%, respectively. We also observed that twice the concentration (2X of premix was stable at 4°C for 4 months and dry swab samples gave concordant results with that of wet swabs. These features make the test best suitable for routine diagnosis of genital infections in developing countries.

  13. Stable hepatitis C virus RNA detection by RT-PCR during four days storage

    Directory of Open Access Journals (Sweden)

    Horsmans Yves

    2002-10-01

    Full Text Available Abstract Background Suboptimal specimen processing and storage conditions of samples which contain hepatitis C virus (HCV RNA may result in a decline of HCV RNA concentration or false-negative results in the detection of HCV RNA in serum. We evaluated the stability of HCV RNA in serum and clotted blood samples stored at room temperature or at 4°C for 4 days with the aim of optimizing the standard procedures of processing and storage of samples. Methods Blood from five HCV RNA positive patients was collected in tubes with and without separator gel, centrifuged 1 or 6 hours after collection. Samples were then left 6, 24, 48, 72 or 96 h at room temperature (21.5 – 25.4°C or at 4°C before determining their HCV RNA level using the COBAS AMPLICOR HCV MONITOR Test, vs 2.0 (Roche Diagnostic Systems. Results The logarithm of the HCV RNA level measurements remained within a 0.3 value of the means for 4 days at both temperatures (room temperature or 4°C. Conclusions We conclude that blood samples may be collected and aliquoted within 6 h of collection and can be stored at 4°C for 72 hours as proposed by the manufacturer without significant differences in measured HCV RNA level. Our results indicate that lapses in this scheme may still yield reliable results.

  14. Evaluation of five kits for screening Chlamydia trachomatis%五种不同沙眼衣原体实验室筛查试剂检测性能评价

    Institute of Scientific and Technical Information of China (English)

    赵广录; 张娟娟; 王峰; 于微; 洪福昌; 蓝丽娜; 吴肖冰; 张春来; 冯铁建

    2012-01-01

    Objective To evaluate five kits for screening Chlamydia trachomatis (CT) by comparing the CT screening test results with Roche Cobas Amplicor test . Methods A proportionate stratified sampling was taken a-mong 32 medical institutions, and 1986 urogenital specimens were collected from STD , gynecology and urology clinics from September to November 2009. Various Chlamydia trachomatis detection methods were evaluated by comparing with Roche Cobas Amplicor test as a "golden standard", Results By comparing with Roche Cobas Amplicor test, the sensitivity of three kinds of gold-Immunochromatographic assay (ICA) , I. E. Rapid-test kits of ICA1, ICA2 and ICA3 was 34. 48%, 15. 22% and 52.53% respectively, The specificity was 99.45%, 98.04% and 98. 93% respectively, the positive predictive value (PPV) was 93. 75% ,63. 64% and 92. 86% , the negative predictive value (NPV) was 86. 36%, 83. 68% and 88. 73%. The sensitivity of the two polymerase chain reaction (PCR) kits of PCR1 and PCR2 was 70. 09% and 96. 43% respectively ; their specificity was 99. 44% and 100. 00% respectively, the positive predictive value (PPV) was 96. 15% and 100.00% , and the negative predictive value (NPV) was 94. 34% and 99. 31%. Four types of samples tested by ICA kits showed obvious differences in sensitivity and specificity. But no similar results were found in PCR detection test. Conclusions The performances of immuno-chromatographic test kits produced by these three companies are significantly different. But the overall level is lower than that of the PCR detection kits. In addition, the type of specimen also affects the result of Chlamydia trachomatis detection. The immunochromatography test kit is more suitable for female vaginal and cervical samples.%目的 通过对不同商品化沙眼衣原体(CT)检测试剂的检测结果,与Roche Cobas Amplicor检测结果的分析比较,评价5种沙眼衣原体检测试剂的性能.方法 采用分层按比例的方法抽取32家医

  15. Does chronic alcohol use by HIV-infected patients on d4T/3TC/NVP drug regimen effect the HIV viral load and what is the therapeutic window of the drugs, CD4+ count and WBC count in patients with high viral load during the 9 months period of follow up?

    Directory of Open Access Journals (Sweden)

    Godfrey S. Bbosa

    2013-10-01

    Full Text Available The study investigated the effects of chronic alcohol use on HIV viral load in HIV-infected patients on d4T/3TC/NVP drug regimen during 9 months follow up period. It also determined plasma drug concentrations of d4T, 3TC and NVP; CD4+ and WBC counts for patients with high HIV viral load. A case-control study using repeated measures with serial measurements was used. A total of 41 patients (20 alcohol group and 21 control group were screened for alcohol use using WHO AUDIT tool and chronic alcohol use biomarkers. Blood sampling was done at 3 month intervals for a period of 9 months. HIV viral load was determined using Roche Amplicor HIV-1 monitor test, version 1.5 (Amplicor. The d4T, 3TC and NVP concentrations were determined by Shimadzu Class-VPTM HPLC Chromatography data system version 6.1. The CD4+ cell count was determined using FACSCalibur flow cytometer. The WBC was determined using automated hematological Coulter CBC-5 Hematology Analyzer system. Results show that % patients with HIV viral load ≥400 copies/ml in control group was highest (23.8%, n=5 at 3 month while in chronic alcohol use group, it was at 0 month (35%, n=7 for both WHO AUDIT tool and chronic alcohol-use biomarkers groups. Generally patients with high viral load ≥400 copies/ml was observed in chronic alcohol use as compared to control group in both WHO AUDIT tool and biomarkers group despite of patients having high steady state d4T, 3TC and NVP plasma drug concentrations in circulation that is available to suppress HIV virus. The high viral load could be associated with the emergence of resistance of the HIV virus and these patients generally had a low CD4+ cell count. Some of these patients had no detectable d4T plasma drug concentrations in circulation and most of them with high viral load had sub-therapeutic NVP plasma drug concentrations in their blood circulation. Chronic ethanol use by HIV-infected patients on d4T/3TC/NVP drug regimen increased HIV viral load and

  16. Cytology and Human Papillomavirus Testing 6 to 12 Months after ASCUS or LSIL Cytology in Organized Screening To Predict High-Grade Cervical Neoplasia between Screening Rounds

    Science.gov (United States)

    Sjøborg, Katrine D.; Nygård, Mari; Røysland, Kjetil; Campbell, Suzanne; Alfsen, G. Cecilie; Jonassen, Christine M.

    2012-01-01

    We carried out a prospective study comparing the performance of human papillomavirus (HPV) E6/E7 mRNA (PreTect HPV-Proofer; NorChip, Klokkarstua, Norway) and DNA (Amplicor HPV test; Roche Diagnostics, Basel, Switzerland) triage testing of women 6 to 12 months after atypical-squamous-cells-of-undetermined-significance (ASCUS) or low-grade-squamous-intraepithelial-lesion (LSIL) cytology in organized screening to predict high-grade cervical intraepithelial neoplasia of grade 2 or worse (CIN2+) between screening rounds. Between January 2005 and April 2008, 692 study women with screening-detected ASCUS/LSIL cytology 6 to 12 months earlier returned for HPV mRNA and DNA testing and repeat cytology. The median follow-up time was 3 years, using existing health care facilities. Follow-up test results were available for 625 women. Of the 145 CIN2+ cases detected during the study period, 95 (65.5%) were HPV mRNA positive 6 to 12 months after screening-detected ASCUS/LSIL, 44 (30.4%) were HPV mRNA negative, and 6 (4.1%) were invalid. The corresponding HPV DNA results were 139 (95.9%), 5 (3.4%), and 1 (0.7%), respectively. The cumulative incidences of CIN2+ 3 years after a negative HPV mRNA and DNA test were 10.3% (95% confidence interval [CI], 7.2 to 13.3%) and 1.8% (95% CI, 0.0 to 3.6%), respectively. The cumulative incidences of CIN2+ 3 years after positive HPV mRNA and DNA tests were 52.8% (95% CI, 40.1 to 60.1%) and 41.3% (95% CI, 35.5 to 46.6%), respectively. In conclusion, both positive HPV mRNA and DNA test results have a high enough long-term prediction of CIN2+ risk to consider referral to colposcopy as good practice when performed in delayed triage of women with ASCUS/LSIL cytology. In addition, the low CIN2+ risk among women with a negative Amplicor HPV test in our study confirms its safe use in a clinical setting. PMID:22518869

  17. Treatment seeking behaviors related to gonorrhea among female sex workers in 7 cities in Indonesia

    Directory of Open Access Journals (Sweden)

    Roselinda Roselinda

    2014-02-01

    Full Text Available Abstrak Latar belakang:Gonore merupakan salah satu infeksi menular seksual yang menjadi permasalahan besar kesehatan terutama pada wanita penjaja seks (WPS di Indonesia. Tujuan dari artikel ini adalah untuk melihat hubungan antara pola pencarian pengobatan gonore. Metode:Data berasal dari studi potong lintang dengan responden WPS yang dipilih secara cluster random sampling dari 7 kota (Timika, Yogyakarta, Kupang, Samarinda, Pontianak, Makassar dan Tangerang di Indonesia pada tahun 2007. Diagnosis gonore berdasarkan hasil pemeriksaan Polymerase Chain Reaction (PCR menggunakan Amplicor CT/NG dari Roche yang telah disetujui oleh World Health Orgazation (WHO sebagai alat skrining gonore. Hasil:Proporsi responden yang menderita gonore sebesar 26.1% (404/1750. Persentase penderita gonore yang melakukan upaya pengobatan terdistribusi hampir sama dengan yang mengunjungi fasilitas kesehatan / dokter dengan yang membeli obat sendiri. Subyek yeng melakukan pengobatan tradisional memiliki risiko 44% lebih tinggi menderita gonore dibandingkan dengan subyek yang melakukan pengobatan di fasilitas kesehatan / dokter [risiko relatif suaian (RRa = 1,44; P = 0.044]. Sedangkan subyek yang tidak diobati dibandingkan dengan yang berobat ke fasilitas kesehatan / dokter lebih berisiko 55% menderita gonore (RRa = 1.55; P = 0.002.Kesimpulan: Wanita penjaja seks yang melakukan maupun yang tidak pengobatan tradisional dibandingkan dengan yang mengunjungi fasilitas kesehatan/dokter memiliki risiko yang lebih tinggi menderita gonore. (Health Science Indones 2013;2:87-92Kata kunci:gonore, wanita penjaja seks, IndonesiaAbstractBackground:Gonorrhea is one of sexually transmitted infections that have become a major health problem especially among female sex workers (FSW in Indonesia. The objective of this article is to identify the relationship between treatment seeking behaviors, the sites of study and gonorrhea among FSW. Methods: The data that analyzed derived from cross

  18. Treatment seeking behaviors related to gonorrhea among female sex workers in 7 cities in Indonesia

    Directory of Open Access Journals (Sweden)

    Roselinda Roselinda

    2014-02-01

    Full Text Available Abstrak Latar belakang:Gonore merupakan salah satu infeksi menular seksual yang menjadi permasalahan besar kesehatan terutama pada wanita penjaja seks (WPS di Indonesia. Tujuan dari artikel ini adalah untuk melihat hubungan antara pola pencarian pengobatan gonore. Metode:Data berasal dari studi potong lintang dengan responden WPS yang dipilih secara cluster random sampling dari 7 kota (Timika, Yogyakarta, Kupang, Samarinda, Pontianak, Makassar dan Tangerang di Indonesia pada tahun 2007. Diagnosis gonore berdasarkan hasil pemeriksaan Polymerase Chain Reaction (PCR menggunakan Amplicor CT/NG dari Roche yang telah disetujui oleh World Health Orgazation (WHO sebagai alat skrining gonore. Hasil:Proporsi responden yang menderita gonore sebesar 26.1% (404/1750. Persentase penderita gonore yang melakukan upaya pengobatan terdistribusi hampir sama dengan yang mengunjungi fasilitas kesehatan / dokter dengan yang membeli obat sendiri. Subyek yeng melakukan pengobatan tradisional memiliki risiko 44% lebih tinggi menderita gonore dibandingkan dengan subyek yang melakukan pengobatan di fasilitas kesehatan / dokter [risiko relatif suaian (RRa = 1,44; P = 0.044]. Sedangkan subyek yang tidak diobati dibandingkan dengan yang berobat ke fasilitas kesehatan / dokter lebih berisiko 55% menderita gonore (RRa = 1.55; P = 0.002.Kesimpulan: Wanita penjaja seks yang melakukan maupun yang tidak pengobatan tradisional dibandingkan dengan yang mengunjungi fasilitas kesehatan/dokter memiliki risiko yang lebih tinggi menderita gonore. (Health Science Indones 2013;2:87-92Kata kunci:gonore, wanita penjaja seks, IndonesiaAbstractBackground:Gonorrhea is one of sexually transmitted infections that have become a major health problem especially among female sex workers (FSW in Indonesia. The objective of this article is to identify the relationship between treatment seeking behaviors, the sites of study and gonorrhea among FSW. Methods: The data that analyzed derived from cross

  19. Stratigraphic and technological evidence from the middle palaeolithic-Châtelperronian-Aurignacian record at the Bordes-Fitte rockshelter (Roches d’Abilly site, Central France)

    DEFF Research Database (Denmark)

    Aubry, Thierry; Dimuccio, Luca Antonio; Almeida, Miguel;

    2012-01-01

    This paper presents a geoarchaeological study of Middle and Upper Palaeolithic (Châtelperronian, Aurignacian and Solutrean) occupations preserved at the Bordes-Fitte rockshelter in Central France. The lithostratigraphic sequence is composed of near-surface sedimentary facies with vertical and lat...

  20. Creep and damage in argillaceous rocks: microstructural change and phenomenological modeling; Fluage et endommagement des roches argileuses: evolution de la microstructure et modelisation phenomenologique

    Energy Technology Data Exchange (ETDEWEB)

    Fabre, G

    2005-06-15

    The underground radioactive waste disposal far exceeds the period of exploitation of common civil engineering works. These specific projects require to predict the irreversible deformations over a large time scale (several centuries) in order to assess the extension and to forecast the evolution of the EDZ (Excavation Damage Zone) around the cavity. In this study, the viscosity of three sedimentary argillaceous rocks has been studied under different conditions of uniaxial compression: static or cyclic creep tests, monotonic and quasistatic tests, performed across various strata orientations. Argillaceous rocks are studied as a possible host layer for radioactive waste disposals. Indeed, they present some of the physical characteristics and mechanical properties, which are essential for being a natural barrier: low permeability, high creep potential and important holding capacity of radioactive elements. The purpose of the experimental study was to shed some light over the mechanisms governing the development of delayed deformations and damage of argillaceous rocks. It relates three rocks: an argillite from East of France, a Tournemire argillite and a marl from Jurassic Mountains. On atomic scale, viscoplastic deformations are due to irreversible displacements of crystalline defects, called dislocations. The experimental study was also supplemented with observations on thin sections extracted from the argillite and marl samples using a SEM. The aim was to identify the mechanisms responsible for the time-dependent behaviour on a microstructural scale. Analytical simulations of the mechanical behaviour of the three rocks gave parameters used in different viscoplastic models. The best modeling was obtained with the viscoplastic model which takes account of the development of volumetric strains and of the damage anisotropy. (author)

  1. Prevalence of human papillomavirus in 5,072 consecutive cervical SurePath samples evaluated with the Roche cobas HPV real-time PCR assay.

    Directory of Open Access Journals (Sweden)

    Sarah Preisler

    Full Text Available New commercially available Human Papillomavirus (HPV assays need to be evaluated in a variety of cervical screening settings. Cobas HPV Test (cobas is a real-time PCR-based assay allowing for separate detection of HPV genotypes 16 and 18 and a bulk of 12 other high-risk genotypes. The aim of the present study, Horizon, was to assess the prevalence of high-risk HPV infections in an area with a high background risk of cervical cancer, where women aged 23-65 years are targeted for cervical screening. We collected 6,258 consecutive cervical samples from the largest cervical screening laboratory in Denmark serving the whole of Copenhagen. All samples were stored in SurePath media. In total, 5,072 samples were tested with cobas, Hybrid Capture 2 High Risk HPV DNA test (HC2 and liquid-based cytology. Of these, 27% tested positive on cobas. This proportion decreased by age, being 43% in women aged 23-29 years and 10% in women aged 60-65 years. HC2 assay was positive in 20% of samples, and cytology was abnormal (≥ atypical squamous cells of undetermined significance for 7% samples. When only samples without recent abnormalities were taken into account, 24% tested positive on cobas, 19% on HC2, and 5% had abnormal cytology. The proportion of positive cobas samples was higher than in the ATHENA trial. The age-standardized cobas positivity vs. cytology abnormality was 3.9 in our study and 1.7 in ATHENA. If in Copenhagen the presently used cytology would be replaced by cobas in women above age 30 years, an extra 11% of women would based on historical data be expected to have a positive cobas test without an underlying cervical intraepithelial lesion grade 3 or worse. Countries with a high prevalence of HPV infections should therefore proceed to primary HPV-based cervical screening with caution.

  2. Rescaling power relations between trade unions and corporate management in a globalising pharmaceutical industry: the case of the acquisition of Boehringer Mannheim by Hoffman - La Roche

    OpenAIRE

    Christian Zeller

    2000-01-01

    Multinational corporations (MNCs) are reorganising their production systems. Many MNCs are integrating their production on a continental scale and allocating specific responsibilities and tasks to their research centres on a global scale. Empirical research on the pharmaceutical industry suggests that the spatial reorganisation of the production system can be understood as a process of reterritorialisation and deterritorialisation on different scales. In this paper I outline how MNCs in the p...

  3. About the identification of behaviour law parameters of clayey rocks; Sur l'identification des parametres des lois de comportement des roches argileuses

    Energy Technology Data Exchange (ETDEWEB)

    Lecampion, B

    2002-09-15

    This work aims at developing identification methods for clayey rock parameters. These methods are necessary for the interpretation of the numerous data obtained at the ANDRA's Meuse/Haute-Marne underground laboratory. Two main rheological aspects have been considered: the poro-elastic behaviour and the elasto-visco-plastic behaviour. The first part of the study focusses on the poro-elastic parameters. Chapter 2 recalls the direct problem and discusses some important points of the identification inverse problem. Chapter 3 deals with the formulation of gradient calculation techniques for the linear poro-elastic case. The resolution using the finite-element method is discussed. The direct and associated state differentiation methods are validated for a 2D numerical example using the finite-element code Cast3M. The identification of poro-elastic coefficients of the Meuse/Haute-Marne argillaceous rocks is discussed in detail in chapter 4. The use of approximate semi-explicit solutions of the direct problems allows to obtain a fast identification method. The second part deals with the identification of elasto-visco-plastic parameters. The visco-plastic behaviour of Meuse/Haute-Marne rocks is discussed in chapter 5 and a visco-plastic model with nonlinear isotropic cold-drawing is proposed which allows to reproduce the tests. The parameters of this behaviour law are identified on a 1D creep test in drained conditions. Thus, the delayed deformations come from the poro-elastic and visco-plastic behaviour of the rock. It is shown that both phenomena can be separated. All poro-elasto-visco-plastic parameters are identified and a semi-explicit solution of the creep test is used. Chapter 6 presents an identification method of the elasto-visco-plastic parameters for the general case. The identification is equivalent to the minimization of a cost functional. The gradient of the functional is calculated by direct differentiation. The direct differentiation method is developed in Cast3M for the Norton-Hoff elasto-visco-plastic law. The identification of the parameters of this law on 1D and 2D configurations of underground facilities is then presented. Measurements are simulated using a direct calculation, eventually disturbed. The unicity and stability of this identification problem are discussed. In chapter 7, the method is applied to a real case: the Chamoise tunnel. 1D and 2D flat deformation modeling is used to solve the direct problem. The modeling hypotheses are justified and the obtained parameters allow to correctly reproduce the data. (J.S.)

  4. Visualisation des propriétés capillaires des roches réservoir Visualizing the Capillary Properties of Reservoir Rocks

    Directory of Open Access Journals (Sweden)

    Zinszner B.

    2006-11-01

    Full Text Available Cet article décrit des expériences de drainage par centrifugation et d'imbibition par ascension capillaire réalisées avec des résines époxy colorées. Après polymérisation, l'observation des lames minces permet de localiser les fluides mouillants et non mouillants. Après avoir décrit les modes opératoires en insistant sur l'analyse des paramètres expérimentaux, on donne des exemples d'applications à la géologie de réservoir. Deux points sont développés : les études de perméabilités et les modèles de réservoir qui permettent d'étudier la répartition du fluide mouillant et des fractions déplaçables ou piégées du fluide non mouillant. This article describes drainage experiments by centrifuge method and imbibition by capillary rise performed with colored epoxy resins. After polymerization, analysis of thin sections serves to situate the wetting and nonwetting fluids. After describing the operating methods with em-phasis on the analysis of experimental parameters, the article gives examples of applications to reservoir geology. The following two points are developed : (i permeability investigations and (ii reservoir modelswhich can be used to analyze the distribution of the wetting fluid and the movable or trapped fractions of the nonwetting fluid

  5. “Knaller-Sex für alle”: Popfeminist Body Politics in Lady Bitch Ray, Charlotte Roche, and Sarah Kuttner

    Directory of Open Access Journals (Sweden)

    Carrie Smith-Prei

    2011-01-01

    Full Text Available Germany has seen a recent upsurge in publications proclaiming that feminism is again an urgent matter for a new generation of women. Faced with the reactionary demography debate and the hegemony of second-wave feminism, young writers, musicians, journalists, and critics call for new models of feminism relevant to women today. As one of these viable models, popfeminism draws on dominant trends in mass culture, on pop’s forty-year history as a cultural prefix in Germany, and on traditional feminism in order to create a new, ostensibly apolitical, feminist subculture based in self-stylization and individual autonomy. Shared by many popfeminist sources is the depiction of negatively coded female corporeality. This article begins with a theoretical analysis of writings on sexuality and the body in recent (popfeminist nonfiction. It then examines the negative corporeal self-stylizations in Turkish-German rapper Lady Bitch Ray’s performances since 2006, in former music video host Charlotte Roche’s novel Feuchtgebiete (2008, and in media personality Sarah Kuttner’s novel Mängelexemplar (2009. Ultimately, these negatively coded bodies are shown to uncover popfeminism’s political intent.

  6. Evaluation of an Upgraded Version of the Roche Cobas AmpliPrep/Cobas TaqMan HIV-1 Test for HIV-1 Load Quantification▿

    OpenAIRE

    Damond, F.; Avettand-Fenoel, V.; Collin, G.; Roquebert, B.; Plantier, J. C.; Ganon, A.; Sizmann, D.; Babiel, R. (Rainer); Glaubitz, J.; Chaix, M. L.; Brun-Vezinet, F.; Descamps, D; Rouzioux, C

    2010-01-01

    We evaluated the performance of the prototype Cobas AmpliPrep/Cobas TaqMan HIV-1 test, version 2.0, using prospective and archived clinical samples initially underquantitated by the Cobas AmpliPrep/Cobas TaqMan HIV-1 test. The performance of the new test was significantly improved, and the majority of the underquantitation observed with the first-version test was eliminated.

  7. Evaluation of an Upgraded Version of the Roche Cobas AmpliPrep/Cobas TaqMan HIV-1 Test for HIV-1 Load Quantification▿

    Science.gov (United States)

    Damond, F.; Avettand-Fenoel, V.; Collin, G.; Roquebert, B.; Plantier, J. C.; Ganon, A.; Sizmann, D.; Babiel, R.; Glaubitz, J.; Chaix, M. L.; Brun-Vezinet, F.; Descamps, D.; Rouzioux, C.

    2010-01-01

    We evaluated the performance of the prototype Cobas AmpliPrep/Cobas TaqMan HIV-1 test, version 2.0, using prospective and archived clinical samples initially underquantitated by the Cobas AmpliPrep/Cobas TaqMan HIV-1 test. The performance of the new test was significantly improved, and the majority of the underquantitation observed with the first-version test was eliminated. PMID:20129964

  8. Evaluation of an upgraded version of the Roche Cobas AmpliPrep/Cobas TaqMan HIV-1 test for HIV-1 load quantification.

    Science.gov (United States)

    Damond, F; Avettand-Fenoel, V; Collin, G; Roquebert, B; Plantier, J C; Ganon, A; Sizmann, D; Babiel, R; Glaubitz, J; Chaix, M L; Brun-Vezinet, F; Descamps, D; Rouzioux, C

    2010-04-01

    We evaluated the performance of the prototype Cobas AmpliPrep/Cobas TaqMan HIV-1 test, version 2.0, using prospective and archived clinical samples initially underquantitated by the Cobas AmpliPrep/Cobas TaqMan HIV-1 test. The performance of the new test was significantly improved, and the majority of the underquantitation observed with the first-version test was eliminated.

  9. Analytical and clinical comparison of Elecsys syphilis (Roche(®)) - Architect syphilis TP and reformulated Architect syphilis TP (Abbott(®)) assay.

    Science.gov (United States)

    De Keukeleire, Steven; Desmet, Stefanie; Lagrou, Katrien; Oosterlynck, Julie; Verhulst, Manon; Van Besien, Jessica; Saegeman, Veroniek; Reynders, Marijke

    2017-03-01

    The performance of Elecsys Syphilis was compared to Architect Syphilis TP and Reformulated Architect Syphilis TP. The overall sensitivity and specificity were 98.4% and 99.5%, 97.7% and 97.1%, and 99.2% and 99.7% respectively. The assays are comparable and considered adequate for syphilis screening.

  10. Experimental study of the effect of damage on rocks permeability; Etude experimentale de l'effet de l'endommagement sur la permeabilite des roches

    Energy Technology Data Exchange (ETDEWEB)

    Bounenni, A

    2002-05-01

    The effect of the cracking of rocks on their permeabilities arouses a growing interest by its consequences on the safety of radioactive waste disposal, and its applications to some problems of oil prospecting. This thesis is devoted to the experimental study of this phenomenon on some varieties of porous rocks. The adopted method consists in examining the evolution of the permeability with damage. Two varieties of clays, known as of the East and Gard varieties, were studied for applications to the problems of waste disposal, as well as a variety of chalk coming from the North Sea for oil applications. The major difficulties of the study of clays consist of a very low permeability and of the brittleness of these materials which make them difficult to create a diffuse damage or cracking in them. We however managed to show for example that the permeability of these materials can multiplied by a factor 100 for 4 per cent irreversible voluminal strain. The chalk is more porous and more permeable, and presents non difficulty for the measurement of the permeability. But the difficulty of creating a state of diffuse damage in this material remains. However, by ways of complex loading paths, we could in some cases make evolve the damage and the permeability and establish a phenomenological relation between these two quantities. Creation of crack in these material by thermal damage, using a microwave oven, proved to be a much simpler way and more promising than the mechanical way. The observation of the damaged clay samples by the electron microscope enabled us to determine the size scale of the microscopic cracks. On the damaged chalk samples, the acoustic velocity measurement made it possible to establish a simple relation between the permeability and the damage. (author)

  11. Influence aqueous solutions on the mechanical behavior of argillaceous rocks; Influence des solutions aqueuses sur le comportement mecanique des roches argileuses

    Energy Technology Data Exchange (ETDEWEB)

    Wakim, J

    2005-12-15

    The hydration of the shale with an aqueous solution induces a swelling deformation which plays an important role in the behaviour of the structures excavated in this type of grounds. This deformation is marked by a three-dimensional and anisotropic character and involves several mechanisms like adsorption, osmosis or capillarity. Several researches were dedicated to swelling and were often much debated due to the complexity of the implied phenomena. The goal of this thesis is therefore to contribute to a better understanding of shale swelling when the rock is confined and hydrated with an aqueous solution. The main part of the work accomplished was related to the Lorraine shale and to the Tournemire shale. To characterize swelling and to identify the main governing parameters, it was necessary to start the issue with an experimental approach. Many apparatus were then developed to carry out tests under various conditions of swelling. In order to facilitate the interpretation of the tests and thereafter the modelling of the behaviour, the experimental procedure adopted consisted of studying first the mechanical aspect and then the chemical aspect of swelling. In the mechanical part, swelling was studied by imposing on the sample a mechanical loading while maintaining during the tests the same aqueous solution. The principal parameters which were studied are the effect of the lateral conditions on axial swelling (impeded strain or constant stress) as well as the influence of the axial stress on radial swelling. The anisotropy of swelling was studied by carrying out, for different orientations of the sample, tests of free swelling, impeded swelling and uniaxial swelling. These various mechanical tests allowed to study the three-dimensional anisotropic swelling in all the conditions and to select the most appropriate test to be used in the second phase of the research. The precise analysis performed to explain the mechanisms behind the swelling of an argillaceous rock when it is in contact of water showed that the mechanical response is ruled mainly by electrochemical phenomena which operate between the solution elements and the clay layers. This important result oriented the research to develop better the role of the chemistry in the behaviour. Swelling was therefore analysed by imposing on the sample a chemical loading while maintaining constant the axial stress. Monovalent and divalent salts which were used with various concentrations are the sodium chloride (NaCl), the potassium chloride (KCl) and the calcium chloride (CaCl{sub 2}). The foreseen objective was to analyze the effect of the chemical path with decreasing or cyclic concentrations and to highlight the role of the solution normality, the type of salt and the anisotropy on the axial swelling. The experimental results obtained allowed the development of a new rheological model which takes into account the time, the anisotropy, the applied loading and the chemistry of the solution. This model was implemented in a finite element code to simulate simple cases and to prove its validity. (author)

  12. Cicatrization of the damaged zone around a tunnel in low permeable rocks; Cicatrisation de la zone endommagee autour du tunnel dans des roches peu permeables

    Energy Technology Data Exchange (ETDEWEB)

    Hamza, R.O

    2005-12-15

    Three types of clays have been studied in this work: the Mol clay (plastic clay), the Mont Terri clay (opalinus clay) and the East clay (stiff clay). This work is divided into three parts: an experimental part which has allowed to identify the cicatrization phenomenon and the cracks closing. Through several tests has been determined the evolution of the permeability of the clayey samples which are undamaged or damaged with time and according to the different applied hydro-mechanical loadings. In order to describe the cicatrization phenomenon, a rheological law has been developed from the experimental observations and under some hypotheses. The parameters of the cicatrization model have been determined by numerical simulation. In order to take into account the structures effects at a large scale, the modelling of a tunnel has allowed to better identify the cicatrization phenomenon and to analyze the long term stability of this work. (O.M.)

  13. Damage-induced permeability changes around underground excavations; Endommagement des roches argileuses et permeabilite induite au voisinage d'ouvrages souterrains

    Energy Technology Data Exchange (ETDEWEB)

    Coll, C

    2005-07-15

    The storage of nuclear waste in deep geological formations is now considered more and more as a potential solution. During excavation, a disturbed zone develops in which damaging can be important and which can lead eventually to the failure of the rock. Fluid flow and permeability in the rock mass can be significantly modified producing a possible security risk. Our work consisted in an experimental study of the hydro-mechanical coupling of two argillaceous rocks: Boom clay (Mol, Belgium) and Opalinus clay (Mont-Terri, Switzerland). Triaxial tests were performed in a saturated state to study the permeability evolution of both clays with isotropic and deviatoric stresses. Argillaceous rocks are geo-materials with complex behaviour governed by numerous coupled processes. Strong physico-chemical interactions between the fluid and the solid particles and their very low permeability required the modification of the experimental set up. Moreover, specific procedures were developed to measure permeability and to detect strain localisation in shear bands. We show that for Boom Clay, permeability is not significantly influenced by strain localisation. For Opalinus clay, fracturing can induce an increase of the permeability at low confining pressure. (author)

  14. Prevalence of human papillomavirus in 5,072 consecutive cervical SurePath samples evaluated with the Roche cobas HPV real-time PCR assay

    DEFF Research Database (Denmark)

    Preisler, Sarah; Rebolj, Matejka; Untermann, Anette

    2013-01-01

    in Denmark serving the whole of Copenhagen. All samples were stored in SurePath media. In total, 5,072 samples were tested with cobas, Hybrid Capture 2 High Risk HPV DNA test (HC2) and liquid-based cytology. Of these, 27% tested positive on cobas. This proportion decreased by age, being 43% in women aged 23......-29 years and 10% in women aged 60-65 years. HC2 assay was positive in 20% of samples, and cytology was abnormal (≥ atypical squamous cells of undetermined significance) for 7% samples. When only samples without recent abnormalities were taken into account, 24% tested positive on cobas, 19% on HC2, and 5......% had abnormal cytology. The proportion of positive cobas samples was higher than in the ATHENA trial. The age-standardized cobas positivity vs. cytology abnormality was 3.9 in our study and 1.7 in ATHENA. If in Copenhagen the presently used cytology would be replaced by cobas in women above age 30...

  15. Fractures inside crystalline rocks. Effects of deformations on fluid circulations; Fractures dans les roches cristallines. Effets des deformations sur les circulations de fluides

    Energy Technology Data Exchange (ETDEWEB)

    Gentier, S

    2005-07-01

    The modeling of fluid flows inside granite massifs is an important task for the evaluation of the feasibility of radioactive waste storage inside such formations. This document makes a synthesis of the works carried out since about 15 years, in particular by the French bureau of geological and mining research (BRGM), about the hydro-mechanical behaviour of a fracture and about the hydrodynamical characterization of fracture networks inside crystalline rocks: 1 - introduction; 2 - hydro-mechanical behaviour under normal stress: experimental results (hydro-mechanical behaviour, flow regimes, mechanical behaviour, test protocol, complementary tests, influence of samples size), geometrical interpretation of experimental results (relation with walls geometry, relation with voids geometry, relation with contacts geometry), hydro-mechanical modeling (hydraulic modeling, mechanical modeling); 3 - from the hydro-mechanical behaviour under normal stress to the coupling with heat transfers and chemistry: experiment for the study of the chemo-thermo-hydro-mechanical coupling (experimental results, relation with walls morphology), thermo-hydro-mechanical experiments, thermo-hydro-chemical experiments with fractures, conclusions; 4 - hydro-mechanical behaviour during shear: experimental results, geometrical interpretation (relation with the geometry of damaged zones, relation with voids geometry, relation with walls geometry), hydro-mechanical modeling (mechanical modeling, hydro-mechanical modeling of the behaviour during shear). (J.S.)

  16. Natural fracturing of rocks: application to the Ahnet basin (Algeria); Fracturation naturelle des roches: application au bassin de l`Ahnet (Algerie)

    Energy Technology Data Exchange (ETDEWEB)

    Badsi, M.

    1998-07-06

    In the Ahnet basin, the production seems to be unrelated to lithological variations in the reservoirs. In these large anticline structures, located in the central Ahnet basin, the presence of gas has been proven, but only a few production wells have been moderately successful. This inconsistency is probably related to the spatial distribution of fracturing throughout the reservoir. In order to investigate several hypothesis, we used several approach to solve problems posed by the interpreter: namely understanding the deformation process, predicting the fractured zones and building the discrete model of fracture network. This approach combines several methods, including sand box modelling, numerical modelling and Statistics rules, often related with fractal behaviour of faults families, have been used for extrapolating observations from seismic or from wells. The numerical tools and sand box analysis have allowed us to answer to the questions related to the formation of this large anticlines in the Ahnet basin and suggest a probable origin of the variation in the spatial distribution of natural fractures. The deterministic predictions of small-scale faults use probabilistic approaches for spatial interpolation assuming implicitly relationship between detected large faults and unresolved small faults. The statistical modelling is used to carry out analysis of the spatial variation of mean fracture attributes at the global scale (a few kilometers) and a 3D stochastic modelling of the fracture system at the local scale (a few ten of meters). (author) 139 refs.

  17. Characterization of Rock Wettability Though Dielectric Measurements Caractérisation de la mouillabilité des roches au moyen de mesures diélectriques

    Directory of Open Access Journals (Sweden)

    Bona N.

    2006-12-01

    Full Text Available The wettability of glass filters and Berea sandstone was investigated using the electric response in the interval 10² - 10 (to the power of 8 Hz. The natural wettability of the materials was modified to get two different sets of samples, one with strong water and the other with strong oil wettability. The samples were saturated to various degrees up to 40% with deionized water or brine. Measurements showed that the electric responses of water-wet and oil-wet samples were markedly different and more complex than those predicted by two standard models. The dispersivity and the loss tangent were found to be the most suitable parameters to check the wettability of the samples. La mouillabilité de filtres de verre et de grès de Béréa a été caractérisée par leur réponse électrique dans l'intervalle 10² - 10 puissance 8 Hz. Au moyen de traitements appropriés, la mouillabilité naturelle des matériaux a été modifiée afin d'obtenir deux séries différentes d'échantillons ayant respectivement de fortes mouillabilités à l'eau et à l'huile. Les échantillons ont été saturés à des degrés variés (pas plus de 40 % avec de l'eau permutée ou de la saumure. Les mesures ont montré que les réponses électriques des échantillons mouillables à l'eau ou mouillables à l'huile étaient nettement différentes et plus compliquées que celles prédites par deux modèles standard. En outre, on a pu constater que la dispersivité et la tangente de pertes constituent les paramètres les plus pertinents pour caractériser la mouillabilité des échantillons.

  18. Monkeypox detection in rodents using real-time 3’minor groove binder Taqman assays on the Roche LightCycler, Laboratory Investigation 84:1200 - 1208

    Science.gov (United States)

    2007-11-02

    DNA 1000 MPV Zaire 79-I-05 10 + + MPXR Zaire 79-I-05 ( Cidofovir - resistant) 10 + + MPV Utrecht 10 + + MPV Sierra Leone 10 + + MPV 12003k 10 + + MPV...100 CMLR— Cidofovir -resistant Camelpox Somalia 100 CPX—cowpox Brighton Red (BR) 100 CPXR— Cidofovir -resistant cowpox Brighton Red 100 VAC...Vaccinia Copenhagen 100 VACR— Cidofovir -resistant Vaccinia Copenhagen 100 HSV-1—Herpes Simplex virus type 1 100 HSV-2—Herpes Simplex virus

  19. Roche Portable Blood Glucose Meter for Clinical Application and Quality Control%便携式血糖仪临床应用与质量控制

    Institute of Scientific and Technical Information of China (English)

    谭丹华

    2014-01-01

    Diabetes is a lifelong disease is stil no cure at present, timing determination of glucose, strict control of blood glucose is the key to the treatment of diabetes melitus. Diabetes ideal blood glucose test is weekly 1~2 times, but generaly patients with no conditions to the hospital for frequent blood glucose testing, and the portable blood glucose meter provides great convenience for patients, the portable blood glucose meter for each ward monitoring blood glucose in patients with circadian changes and outpatient diabetes screening, increasingly the attention of medical workers and patients in this paper, Glucose meter in the clinical diagnosis of practical value in clinical application, quality assessment.%糖尿病是目前尚不能根治的终身性疾病,定时测定血糖值,严格控制血糖是糖尿病治疗的关键。糖尿病理想的血糖测试是每周1~2次,但一般患者没条件到医院作频繁的血糖测试,而便携式血糖仪为患者提供了很大的方便。便携式血糖仪因适合各病房昼夜监测患者血糖变化及门诊患者糖尿病筛查,日益受到医务工作者和患者的重视,本文从临床应用、质量检测评估方面阐述血糖仪在临床诊断的实用价值。

  20. A ambos lados del Atlántico: dos fábricas de Kevin Roche y John Dinkeloo para Cummins Engine Company

    Directory of Open Access Journals (Sweden)

    Laura Sánchez Carrasco

    2016-07-01

    Full Text Available Dentro de la trayectoria del estudio KRJDA, ambos edificios se plantearon como nuevas oportunidades para investigar la arquitectura de los espacios industriales. Representarían la búsqueda del style for the job heredado de su maestro, Eero Saarinen, quien ya había colaborado con anterioridad con el cliente de las fábricas, J. Irwin MillerEn , en varios proyectos en  Columbus, Ohio. El objetivo es revisar y comparar los conceptos que definen estos dos proyectos construidos para el mismo cliente pero en países diferentes y con requerimientos funcionales distintos. En la planta de Darlington la cuestión se centrará fundamentalmente en sus soluciones constructivas, mientras que en la de Walesboro se reformuló la tipología y el planteamiento funcional de un edificio industrial. Darlington posee grado II de protección desde 1993 y Walesboro ha sido remodelada respetando el espíritu inicial, mereciendo ambas un lugar destacado en el patrimonio industrial del siglo XX.

  1. Performance Evaluation of Manual and Automated (MagNA Pure Nucleic Acid Isolation in HPV Detection and Genotyping Using Roche Linear Array HPV Test

    Directory of Open Access Journals (Sweden)

    Aikaterini Chranioti

    2011-01-01

    Full Text Available Nucleic acids of human papillomavirus (HPV isolated by manual extraction method (AmpliLute and automated MagNA pure system were compared and evaluated with cytohistological findings in 253 women. The concordance level between AmpliLute and MagNA was very good 93.3% (=0.864, <.0001. Overall HPVpositivity detected by AmpliLute was 57.3% (30.4% as single and 27% as multiple infections in contrast to MagNA 54.5% (32% and 23%, resp.. Discrepant results observed in 25 cases: 11 MagNA(−/AmpliLute(+, 10 of which had positive histology; 5 MagNA(+/AmpliLute(− with negative histology; 8 MagNA(+/AmpliLute(+: in 7 of which AmpliLute detected extra HPV genotypes and 1 MagNA(invalid/AmpliLute(+ with positive histology. Both methods performed well when compared against cytological (area under curve (AUC of AmpliLute 0.712 versus 0.672 of MagNA and histological diagnoses (AUC of AmpliLute 0.935 versus 0.877 of MagNA, with AmpliLute showing a slightly predominance over MagNA. However, higher sensitivities, specificities, and positive/negative predictive values were obtained by AmpliLute.

  2. Reduction of Polymer Adsorption on Reservoir Rocks Réduction de l'adsorption des polymères sur les roches réservoirs

    Directory of Open Access Journals (Sweden)

    Chauveteau G.

    2006-11-01

    Full Text Available The adsorption properties of polyacrylamides and xanthans on mineral surfaces carrying silanol and aluminol groups such as sand and kaolinite are described. The influence of the main parameters such as the nature of adsorption sites, surface charge, chemical structure and conformation of polymer and interactions of mono- and divalent ions with polymer and mineral surface has been investigated and interpreted. Some operating parameters in polymer flooding such as pH and salinity of injected solution, the nature of the polymer and its degree of ionicity were found to be determining factors from the adsorption level. The results give key elements for reducing adsorption by a proper choice of polymer nature and ionicity and of injection conditions. Les propriétés d'adsorption des polyacrylamides et des xanthanes sur des surfaces minérales portant des groupements silanols et aluminols comme le sable et la kaolinite ont été examinées. L'influence de différents paramètres est analysée : nature des sites d'adsorption, charge de surface, structure chimique et conformation du polymère, interactions des ions mono et divalents avec la surface. Il apparaît que le pH et la salinité de la solution injectée, la nature du polymère et, en particulier son degré d'ionicité, qui sont les paramètres opérationnels lors d'une injection de polymère destinée à augmenter le taux de récupération du pétrole, sont déterminants en ce qui concerne les niveaux d'adsorption. On en déduit les principaux moyens pour réduire l'adsorption dans un cas d'application donné.

  3. Dynamics of stellar wind in a Roche potential: implications for (i) outflows & periodicities relevant to astronomical masers, and (ii) generation of baroclinicity

    CERN Document Server

    Singh, Nishant K

    2015-01-01

    We study the dynamics of stellar wind from one of the bodies in the binary system, where the other body interacts only gravitationally. We focus on following three issues: (i) we explore the origin of observed periodic variations in maser intensity; (ii) we address the nature of bipolar molecular outflows; and (iii) we show generation of baroclinicity in the same model setup. From direct numerical simulations and further numerical modelling, we find that the maser intensity along a given line of sight varies periodically due to periodic modulation of material density. This modulation period is of the order of the binary period. Another feature of this model is that the velocity structure of the flow remains unchanged with time in late stages of wind evolution. Therefore the location of the masing spot along the chosen sightline stays at the same spatial location, thus naturally explaining the observational fact. This also gives an appearance of bipolar nature in the standard position-velocity diagram, as has ...

  4. Approach to underground characterization of a disposal vault in granite; Methode de caracterisation souterraine d`une enceinte de stockage dans la roche granitique

    Energy Technology Data Exchange (ETDEWEB)

    Everitt, R.A.; Martin, C.D.; Thompson, P.M.

    1994-12-01

    The concept of disposing of nuclear fuel waste by sealing it in a disposal vault in the Canadian Shield is being investigated as part of the Canadian Nuclear Fuel Waste Management Program. Engineered and natural barriers would isolate the waste from the biosphere. Underground characterization and testing have been under way since 1983 at the Underground Research Laboratory in support of this program. This report draws on experience gained at the URL to recommend an approach to underground characterization to obtain information to optimize the design of the excavation and the engineered barriers, and to provide a baseline against which to monitor the performance of the facility during and following its operation.

  5. Chlamydia trachomatis infection and sexual behaviour among female students attending higher education in the Republic of Ireland.

    LENUS (Irish Health Repository)

    O'Connell, Emer

    2009-10-29

    BACKGROUND: There are no prevalence data on Chlamydia trachomatis relating to female students attending higher education available for the Republic of Ireland. This information is required to guide on the necessity for Chlamydia screening programmes in higher education settings. This research aimed to determine the prevalence of and predictive risk factors for Chlamydia trachomatis genital infection among female higher education students in Ireland. METHODS: All females presenting during one-day periods at Student Health Units in three higher education institutions in two cities in the Republic of Ireland were invited to participate. Participants completed a questionnaire on lifestyle and socio-demographic factors and provided a urine sample. Samples were tested for C. trachomatis DNA by a PCR based technique (Cobas Amplicor, Roche). To examine possible associations between a positive test and demographic and lifestyle risk factors, a univariate analysis was performed. All associations with a p value < 0.05 were included in a multivariate logistic regression analysis. RESULTS: Of the 460 sexually active participants 22 tested positive (prevalence 4.8%; 95% CI 3.0 to 7.1%). Variables associated with significantly increased risk were current suggestive symptoms, two or more one-night stands and three or more lifetime sexual partners. The students displayed high-risk sexual behaviour. CONCLUSION: The prevalence of C. trachomatis infection and the lack of awareness of the significance of suggestive symptoms among sexually experienced female students demonstrate the need for a programme to test asymptomatic or non-presenting higher education students. The risk factors identified by multivariate analysis may be useful in identifying those who are most likely to benefit from screening. Alcohol abuse, condom use, sexual behaviour (at home and abroad) and, knowledge of sexually transmitted infections (STIs) (including asymptomatic nature or relevant symptoms) were

  6. Prevalence of Sexually Transmitted Infection in Teenage Pregnancy in Rajavithi Hospital, Thailand.

    Science.gov (United States)

    Asavapiriyanont, Suvanna; Chaovarindr, Udom; Kaoien, Surasak; Chotigeat, Uraiwan; Kovavisarach, Ekachai

    2016-02-01

    Behavioral and social changes in the modern era have triggered an increase in the incidence of early sexual contact and teenage pregnancy. Since there is no routine Gonococcal & Chlamydial (GC & CT) screening in teens in antenatal clinics in Thailand, the present study was performed to find the prevalence of STI, especially Chlamydial infection, in teenage pregnancy. To evaluate the prevalence of sexually transmitted infections (STIs), especially Chlamydial infection (CT), in teenage pregnancy and its related factors. One hundred and twenty-one teenage pregnancies were recruited at the ANC in Rajavithi Hospital from October 2006 to May 2007. After signing informed consent forms, they were asked to answer questionnaires about baseline data, sexual information and risk factors, after which urine specimens were collected for screening for GC and CT using the PCR technique (AMPLICOR by Roche). Later, pelvic examination was per formed by the gynecologist at the STD (sexually transmitted disease) clinic. All the data and LAB results were recorded and analyzed by the SPSS program. Numbers, percentages, means with SD, Chi-squared test, Fisher's exact test and odds ratio were used. Potential risk factors were analyzed using binary logistic regression. The prevalence of STI in pregnant teenagers was 28.1% (CT = 19.8%, GC = 1.7%, hepatitis B = 3.3%, trichomoniasis 1.7%, Herpes simplex = 0.8% and condyloma acuminata = 0.8%). No Syphilis, chancroid or HIV were found in the present study Other non-STI like candidiasis and bacterial vaginosis were found in 45.5% of participants (candidiasis and bacterial vaginosis at 19.0% and 24.8%, respectively). The risk of CT infection was significantly related (6.9 times higher) to having previous sexual contact before the current partner (95% CI, 1.8-27.0). STI, especially Chlamydial infection, was found in a significant number of teenage pregnancies. Measures should be taken to prevent this resulting in complicated outcomes in the future.

  7. Variables that influence HIV-1 cerebrospinal fluid viral load in cryptococcal meningitis: a linear regression analysis

    Directory of Open Access Journals (Sweden)

    Cecchini Diego M

    2009-11-01

    Full Text Available Abstract Background The central nervous system is considered a sanctuary site for HIV-1 replication. Variables associated with HIV cerebrospinal fluid (CSF viral load in the context of opportunistic CNS infections are poorly understood. Our objective was to evaluate the relation between: (1 CSF HIV-1 viral load and CSF cytological and biochemical characteristics (leukocyte count, protein concentration, cryptococcal antigen titer; (2 CSF HIV-1 viral load and HIV-1 plasma viral load; and (3 CSF leukocyte count and the peripheral blood CD4+ T lymphocyte count. Methods Our approach was to use a prospective collection and analysis of pre-treatment, paired CSF and plasma samples from antiretroviral-naive HIV-positive patients with cryptococcal meningitis and assisted at the Francisco J Muñiz Hospital, Buenos Aires, Argentina (period: 2004 to 2006. We measured HIV CSF and plasma levels by polymerase chain reaction using the Cobas Amplicor HIV-1 Monitor Test version 1.5 (Roche. Data were processed with Statistix 7.0 software (linear regression analysis. Results Samples from 34 patients were analyzed. CSF leukocyte count showed statistically significant correlation with CSF HIV-1 viral load (r = 0.4, 95% CI = 0.13-0.63, p = 0.01. No correlation was found with the plasma viral load, CSF protein concentration and cryptococcal antigen titer. A positive correlation was found between peripheral blood CD4+ T lymphocyte count and the CSF leukocyte count (r = 0.44, 95% CI = 0.125-0.674, p = 0.0123. Conclusion Our study suggests that CSF leukocyte count influences CSF HIV-1 viral load in patients with meningitis caused by Cryptococcus neoformans.

  8. Risk factors for active trachoma and ocular Chlamydia trachomatis infection in treatment-naive trachoma-hyperendemic communities of the Bijagos Archipelago, Guinea Bissau.

    Directory of Open Access Journals (Sweden)

    Anna R Last

    2014-06-01

    Full Text Available Trachoma, caused by ocular infection with Chlamydia trachomatis, is hyperendemic on the Bijagós Archipelago of Guinea Bissau. An understanding of the risk factors associated with active trachoma and infection on these remote and isolated islands, which are atypical of trachoma-endemic environments described elsewhere, is crucial to the implementation of trachoma elimination strategies.A cross-sectional population-based trachoma prevalence survey was conducted on four islands. We conducted a questionnaire-based risk factor survey, examined participants for trachoma using the World Health Organization (WHO simplified grading system and collected conjunctival swab samples for 1507 participants from 293 randomly selected households. DNA extracted from conjunctival swabs was tested using the Roche Amplicor CT/NG PCR assay. The prevalence of active (follicular and/or inflammatory trachoma was 11% (167/1508 overall and 22% (136/618 in 1-9 year olds. The prevalence of C. trachomatis infection was 18% overall and 25% in 1-9 year olds. There were strong independent associations of active trachoma with ocular and nasal discharge, C. trachomatis infection, young age, male gender and type of household water source. C. trachomatis infection was independently associated with young age, ocular discharge, type of household water source and the presence of flies around a latrine.In this remote island environment, household-level risk factors relating to fly populations, hygiene behaviours and water usage are likely to be important in the transmission of ocular C. trachomatis infection and the prevalence of active trachoma. This may be important in the implementation of environmental measures in trachoma control.

  9. HCV RNA detection by TMA during the hepatitis C antiviral long-term treatment against cirrhosis (Halt-C) trial.

    Science.gov (United States)

    Morishima, Chihiro; Morgan, Timothy R; Everhart, James E; Wright, Elizabeth C; Shiffman, Mitchell L; Everson, Gregory T; Lindsay, Karen L; Lok, Anna S F; Bonkovsky, Herbert L; Di Bisceglie, Adrian M; Lee, William M; Dienstag, Jules L; Ghany, Marc G; Gretch, David R

    2006-08-01

    For making treatment decisions related to chronic hepatitis C, the utility of HCV RNA tests with increased sensitivity has not been defined. Prior interferon nonresponders with advanced fibrosis (n = 1,145) were retreated with peginterferon alpha-2a and ribavirin. Patients who were HCV RNA-negative by a polymerase chain reaction (PCR)-based assay (Roche COBAS Amplicor HCV Test, v. 2.0; lower limit of detection [LOD] 100 IU/mL) at week 20 (W20) received treatment for 48 weeks. Stored specimens were tested using the Bayer VERSANT HCV RNA Qualitative (TMA) Assay (LOD 9.6 IU/mL) and compared to PCR results for the ability to predict sustained virological response (SVR; defined as undetectable HCV RNA by PCR at W72). Nearly all PCR-positive samples (1006/1007, 99.9%) were positive as assessed by TMA. Among 1,294 PCR-negative samples, 22% were TMA-positive. Negative TMA results were more predictive of SVR than were negative PCR results at W12 (82% vs. 64%, P TMA had become negative during treatment (82% at W12, 44% at W20, 20% at W24). Among 45 patients who were TMA-positive but were PCR-negative at W20 and W24, none achieved SVR (95% CI: 0%-8%). Approximately 10% of patients with a single positive TMA result at the end of treatment still achieved SVR. In conclusion, negative TMA results at or after W12 were superior to negative PCR results for predicting SVR. In patients with negative PCR results during treatment, a single positive TMA test did not exclude SVR, although persistently positive tests did.

  10. Benefit of Hepatitis C Virus Core Antigen Assay in Prediction of Therapeutic Response to Interferon and Ribavirin Combination Therapy

    OpenAIRE

    Takahashi, Masahiko; Saito, Hidetsugu; Higashimoto, Makiko; Atsukawa, Kazuhiro; Ishii, Hiromasa

    2005-01-01

    A highly sensitive second-generation hepatitis C virus (HCV) core antigen assay has recently been developed. We compared viral disappearance and first-phase kinetics between commercially available core antigen (Ag) assays, Lumipulse Ortho HCV Ag (Lumipulse-Ag), and a quantitative HCV RNA PCR assay, Cobas Amplicor HCV Monitor test, version 2 (Amplicor M), to estimate the predictive benefit of a sustained viral response (SVR) and non-SVR in 44 genotype 1b patients treated with interferon (IFN) ...

  11. Survival of infants born to HIV-positive mothers, by feeding modality, in Rakai, Uganda.

    Directory of Open Access Journals (Sweden)

    Joseph Kagaayi

    Full Text Available BACKGROUND: Data comparing survival of formula-fed to breast-fed infants in programmatic settings are limited. We compared mortality and HIV-free of breast and formula-fed infants born to HIV-positive mothers in a program in rural, Rakai District Uganda. METHODOLOGY/PRINCIPAL FINDINGS: One hundred eighty two infants born to HIV-positive mothers were followed at one, six and twelve months postpartum. Mothers were given infant-feeding counseling and allowed to make informed choices as to whether to formula-feed or breast-feed. Eligible mothers and infants received antiretroviral therapy (ART if indicated. Mothers and their newborns received prophylaxis for prevention of mother-to-child HIV transmission (pMTCT if they were not receiving ART. Infant HIV infection was detected by PCR (Roche Amplicor 1.5 during the follow-up visits. Kaplan Meier time-to-event methods were used to compare mortality and HIV-free survival. The adjusted hazard ratio (Adjusted HR of infant HIV-free survival was estimated by Cox regression. Seventy-five infants (41% were formula-fed while 107 (59% were breast-fed. Exclusive breast-feeding was practiced by only 25% of breast-feeding women at one month postpartum. The cumulative 12-month probability of infant mortality was 18% (95% CI = 11%-29% among the formula-fed compared to 3% (95% CI = 1%-9% among the breast-fed infants (unadjusted hazard ratio (HR = 6.1(95% CI = 1.7-21.4, P-value < 0.01. There were no statistically significant differentials in HIV-free survival by feeding choice (86% in the formula-fed compared to 96% in breast-fed group (Adjusted RH = 2.8[95%CI = 0.67-11.7, P-value = 0.16] CONCLUSIONS/SIGNIFICANCE: Formula-feeding was associated with a higher risk of infant mortality than breastfeeding in this rural population. Our findings suggest that formula-feeding should be discouraged in similar African settings.

  12. NMR studies of the molecules dynamics to the solid-liquid interfaces: from graded porous materials to oil rocks; Etudes RMN de la dynamique des molecules aux interfaces solide-liquide: des materiaux poreux calibres aux roches petroliferes

    Energy Technology Data Exchange (ETDEWEB)

    Godefroy, S.

    2001-11-01

    Low field NMR relaxation for laboratory or in-situ applications provides critical information for oil recovery such as porosity, saturation, and permeability of rocks. In addition, pore size distribution and wettability can also be obtained in some cases. The technique relies on the measurement of proton longitudinal (T{sub 1}) or transverse (T{sub 2}) nuclear relaxation times. For better predictions, the surface micro-dynamics and the chemical properties of the liquids entrapped in the pore space are important and must be characterized. It is well known that the NMR relaxation is enhanced by the paramagnetic impurities at the pore surface but many other parameters influence the relaxation time distributions. These parameters are used to derive the petrophysical properties of the rocks. We propose here an original method to probe the dynamics of water and oil at the pore surface. In the present study, we used both nuclear relaxation at 2.2 MHz and field cycling Nuclear Magnetic Relaxation Dispersion (NMRD) techniques. We applied these two techniques to different kinds of water or oil saturated macroporous media (grain packings, outcrop and reservoir rocks with SiO{sub 2} or CaCO{sub 3} surfaces). We studied the dependence of NMR relaxation on pore size, magnetic field and temperature. Varying the pore size and the surface density of paramagnetic impurities of water saturated grain packings allowed experimental evidence for the two limiting regimes of the water relaxation in pores (surface- and diffusion-limited regimes). NMRD technique (evolution of 1/T{sub 1} with the magnetic field) allowed us to probe liquid surface dynamics in water or oil fully saturated grain packing, outcrop rocks or reservoir rocks (water- and oil-wet surfaces). We evidenced a two-dimensional molecular surface diffusion and directly estimated important parameters such as correlation times, residence times and molecular self-diffusion on the surface. Finally, we proved that the temperature dependence of T{sub 1} and T{sub 2} is directly related to the surface chemistry of the rocks. Such a dependence is clearly important for oil field in-situ measurements (well logging). (author)

  13. La Réforme et la réforme poétique : les « Octonaires sur la vanité et inconstance du monde » d’Antoine de La Roche de Chandieu

    Directory of Open Access Journals (Sweden)

    Marina Hertrampf

    2015-05-01

    Full Text Available Chandieu fût le propagateur le plus important du protestantisme en France. Cependant, il tomba presque dans l’oubli après sa mort. Parmi les poètes protestants du seizième siècle, il est souvent négligé; même s‘il est un des rares exemples d’auteurs qui dédia toute sa vie littéraire à la diffusion de l’esprit protestant. De plus, il faut souligner que sa poésie morale connut un succès extraordinaire auprès de ses contemporains. Dans ce contexte, il nous semble important d‘illustrer le rôle fondamental que joua Chandieu pendant les conflits de confession et de présenter les spécificités poétiques et esthétiques de sa poésie. Pour débuter, nous nous pencherons sur l’analyse des poèmes de l’ouvrage Octonaires sur la vanité du monde, recueil de courts poèmes ou bien d’octonaires, ainsi que Chandieu appelle ses courts poèmes composés de huitains qui se caractérisent par une grande unité formelle et qui dénoncent la folie et la vanité humaines ainsi que la fugacité de la vie. La genèse des octonaires témoigne le practice protestant de diffuser des textes religieux par circulation manuscrite et clandestine. Avant l’édition imprimée de 1583 qui rassemble cinquante poèmes, il y eut plusieurs versions manuscrites des poèmes.Compte tenu du calvinisme extrême du pasteur Chandieu, il nous semble très intéressant d’examiner les relations entre les poèmes, leur illustration emblématique réalisée par le graveur Etienne Delaune (dans l’édition imprimée de 1580, dix-huit octonaires sont illustrés et leur adaptation musicale par Pascal de L’Estocart (1582.

  14. Efficacité de la roche phosphatée de Matongo au travers d'un compostage sur une culture de pomme de terre sur un sol acide de Rabiro (Burundi

    Directory of Open Access Journals (Sweden)

    Van den Berghe, C.

    1993-01-01

    Full Text Available Efficiency of phosphatic rock from Matongo applied in the composting process on potatoes on an acid soil of Rabiro. In the frame of the Cooperation between the CVHA (Cultures Vivrieres de Haute Altitute Project and the Program of Fertilisation of the Agro-systems on Altitude (FAVA of the Faculty of Agricultural Sciences in Burundi, the local phosphatic rock from Matongo has been compared to diammonium-phosphate when added in the composting process. The field trials with potatoes have shown that both phosphate sources have the same fertilizing value when the enriched compost was applied at the dose of 20 t/ha. It is very interesting from agricultural and economical viewpoint to use this phosphatic rock in combination with compost.

  15. Development of a X-ray micro-tomograph and its application to reservoir rocks characterization; Developpement d`un microtomographe X et application a la caracterisation des roches reservoirs

    Energy Technology Data Exchange (ETDEWEB)

    Ferreira de Paiva, R.

    1995-10-01

    We describe the construction and application to studies in three dimensions of a laboratory micro-tomograph for the characterisation of heterogeneous solids at the scale of a few microns. The system is based on an electron microprobe and a two dimensional X-ray detector. The use of a low beam divergence for image acquisition allows use of simple and rapid reconstruction software whilst retaining reasonable acquisition times. Spatial resolutions of better than 3 microns in radiography and 10 microns in tomography are obtained. The applications of microtomography in the petroleum industry are illustrated by the study of fibre orientation in polymer composites, of the distribution of minerals and pore space in reservoir rocks, and of the interaction of salt water with a model porous medium. A correction for X-ray beam hardening is described and used to obtain improved discrimination of the phases present in the sample. In the case of a North Sea reservoir rock we show the possibility to distinguish quartz, feldspar and in certain zone kaolinite. The representativeness of the tomographic reconstruction is demonstrated by comparing the surface of the reconstructed specimen with corresponding images obtained in scanning electron microscopy. (author). 58 refs., 10 tabs., 71 photos.

  16. Evaluation of performances of VERSANT HCV RNA 1.0 assay (kPCR) and Roche COBAS AmpliPrep/COBAS TaqMan HCV test v2.0 at low level viremia.

    Science.gov (United States)

    Mazzuti, Laura; Lozzi, Maria Antonietta; Riva, Elisabetta; Maida, Paola; Falasca, Francesca; Antonelli, Guido; Turriziani, Ombretta

    2016-07-01

    We assess the concordance between low level HCV values obtained using the VERSANT HCV RNA 1.0 Assay (kPCR) and COBAS AmpliPrep/COBAS TaqMan HCV Quantitative Test v2.0. The correlation between the values obtained by the two RT-PCR assays for samples with quantifiable HCV RNA levels revealed that viral load measured by kPCR significantly correlated with that of the CAP/CTM (R=0.644, PHCV triple therapy or interferon- free regimens. It is therefore recommended to monitor individual patients with the same test throughout treatment.

  17. Smallpox and pan-Orthodox Virus Detection by Real-Time 3’-Minor Groove Binder TaqMan Assays Oil the Roche LightCycler and the Cepheid Smart Cycler Platforms

    Science.gov (United States)

    2007-11-02

    Bacillus anthracis BA0068 Ames Sterne SPS 97.13.213 Bacillus cereus Bacillus coagulans Bacillus licheniformis Bacillus macerans Bacillus ...megaterium Bacillus polymyxa Bacillus sphaericus Bacillus stearothermophilus Bacillus subtilis subsp. niger Bacillus thuringiensis Bacillus popilliae...HA-MGB assay presented here has been used to monitor the viral load in monkey blood and tissues after infection with

  18. Altération des biotites dans les roches cuprifères de Salobo A3, Serra dos Carajàs (Brésil).2. Association du cuivre aux phyllosilicates secondaires

    OpenAIRE

    Toledo-Groke, M.C.; Parisot, Jean-Claude; Melfi, A.J.; Boulangé, Bruno

    1989-01-01

    Dans les gisements cuprifères de Salobo 3A (Serra dos Carajas - Brésil) les biotites saines sont totalement dépourvues de cuivres. Il est montré que dans les phyllosilicates secondaires issus de l'altération météorique de ces biotites la phase minéralogique la plus riche en cuivre est représentée par un produit appelé "biotite altérée". Dans le cas où se forme une smectite, celle-ci présente un enrichissement en cuivre moins important. La kaolinite issue de la transformation secondaire de ces...

  19. Revised conceptual hydrogeologic model of a crystalline rock environment, Whiteshell Research Area, Southeastern Manitoba, Canada; Modele hydrogeologique conceptual revise d`un milieu de roche cristalline, aire de recherche de whiteshell, sud-est du manitoba au canada

    Energy Technology Data Exchange (ETDEWEB)

    Stevenson, D.R.; Brown, A.; Davison, C.C.; Gascoyne, M.; McGregor, R.G.

    1996-04-01

    A revised conceptual hydrogeologic model of regional groundwater flow in the crystalline rocks of the Whiteshell Research Area (WRA) has been developed by a team of AECL geoscientists. The boundaries of the revised conceptual model were selected to coincide with the natural hydraulic boundaries assumed for the regional groundwater flow systems in the WRA. The rocks of the modeled region were divided on the basis of fracture characteristics into three categories: fractured zones (FZs); moderately fractured rock (MFR); and sparsely fractured rock (SFR). The hydraulic properties of the revised conceptual model were modified during an interative process of mathematical model calibration and conceptual model revision. This process included sensitivity analysis and matching of equivalent fresh water hydraulic head and groundwater flux values calculated by the mathematical model and comparison with the field measurements.

  20. Contribution to the modeling of the anisotropic damage and the variation of the permeability of the brittle rocks; Contribution a la modelisation de l'endommagement anisotrope et de la variation de la permeabilite des roches fragiles

    Energy Technology Data Exchange (ETDEWEB)

    Zhou, J

    2006-03-15

    This work deals with a modeling of the mechanical and hydro-mechanical behaviour of saturated rocks taking into account the variation of the permeability with damage. At first is established a function of the free enthalpy by a direct micro-mechanical approach in taking into account the distribution of the microcrack length. The opening of the closed microcracks due to the tangential gliding is taken into account because of the roughness of the cracks surfaces. This opening contributes directly to the volume expansion and to the variation of the macroscopic permeability of the material. A phenomenological approach with an approximation by a damage tensor of two order is shown too. Then, an extension of the model is proposed for describing the poro-mechanical behaviour of saturated rocks. The poro-mechanical answers in drained and undrained conditions of the Vosges sandstone have been studied. In the last part, a coupled model describing the behaviour of the coupling between the induced damage and the variation of the rocks permeability is proposed. (O.M.)

  1. Experimental study of very-low permeability rocks by the implementation of a precision permeameter; Etude experimentale des roches a tres faible permeabilite par la mise en oeuvre d'un permeametre de precision

    Energy Technology Data Exchange (ETDEWEB)

    Larive, E

    2002-12-01

    The measurement of fluid flow through 'tight' rocks is important to provide a better understanding of physical processes involved in several industrial and natural problems. These include deep nuclear waste repositories, management of aquifers, gas, petroleum or geothermal reservoirs, or earthquakes prevention. The major part of this work consisted of the design, construction and use of an elaborate experimental apparatus allowing laboratory permeability measurements (fluid flow) of very low permeability rocks, on samples at a centimetric scale, to constrain their hydraulic behaviour at realistic in-situ conditions.The accuracy permeameter allows the use of several measurement methods, the steady-state flow method, the transient pulse method and the sinusoidal pore pressure oscillation method. Measurements were made with the pore pressure oscillation method, using different waveform periods, at several pore and confining pressure conditions on different materials. The permeability of one natural standard, Westerly granite, and an artificial one, a micro-porous cement, were measured and results obtained agreed with previous measurements made on these materials showing the reliability of the permeameter. A study of a Yorkshire sandstone shows a relationship between rock microstructure, permeability anisotropy and thermal cracking. Microstructure, porosity and permeability concepts, and laboratory permeability measurements specifications are presented, the permeameter is described, and then permeability results obtained on the investigated materials are reported. (author)

  2. Geochemical modeling of water-gas-rock interactions. Application to mineral diagenesis in geologic reservoirs; Modelisation geochimique des interactions eau-gaz-roche. Application a la diagenese minerale dans les reservoirs geologiques

    Energy Technology Data Exchange (ETDEWEB)

    Bildstein, O.

    1998-03-13

    The Ph.D. report describes a conceptual and numerical model for simulating gas-water-rock interaction during mineral diagenesis of sediments. The main specific features of this model are the following: applicable to open systems, half-implicit resolution numerical method, feedback on the texture evolution (grain model), existence of a gas phase, oxido-reduction phenomena. (author) 217 refs.

  3. Comparative evaluation of Roche Aurora FLOW, Becton and Dickinson Viper system, and Dynex DS2 for detection of Chlamydia trachomatis, Neisseria gonorrhoeae, and Trichomonas vaginalis in various clinical specimens.

    Science.gov (United States)

    Vahidnia, Ali; Costa, Sandra; Veenings, Sanne; Tuin, Hellen; van Loon, Linda; Bliekendaal, Harry

    2014-11-01

    The purpose of this study is to introduce a high-throughput system, Aurora FLOW, for the simultaneous detection of 3 clinically relevant pathogens of sexually transmitted infections. Comparative evaluation with other systems revealed an overall concordance of 97.9% for Chlamydia trachomatis and comparable performance for Neisseria gonorrhoeae and Trichomonas vaginalis.

  4. An experimental study on mineral sequestration of CO{sub 2} in basics and ultra basics rocks; Etude experimentale des reactions de carbonatation minerale du CO{sub 2} dans les roches basiques et ultrabasiques

    Energy Technology Data Exchange (ETDEWEB)

    Dufaud, F

    2006-11-15

    The first part of the thesis is dedicated to dissolution data of siderite FeCO{sub 3} and magnetite Fe{sub 3}O{sub 4} which have been monitored in situ on the FAME beamline of the european synchrotron radiation facility in Grenoble. Iron in solution close to siderite single crystals is shown to be divalent hydrated. The small size of the experimentally investigated volume of solution (200 *400 micrometer and 3 mm height) allowed to work with single crystals in well defined geometries. No specific interaction was observed between iron (II) and dissolved inorganic carbon, suggesting that modelling siderite evolution under high CO{sub 2} pressures by using CO{sub 2}-less very acidic (pH 1-2) solutions is adequate. Using initial reaction rates, we get an activation energy for siderite dissolution of 62 kJ.mol{sup -1}, consistent with existing literature data. Such a value is suggestive of a mineral/solution interface mechanism.. Data from this study and from literature are consistent over a temperature range 25 C - 125 C and a pH range pH 1-7 with an empirical law: pk = pH + E{sub a}/(ln(10)*RT(K)) - log(S/V) - 10,5 where E{sub a} = 62 kJ.mol{sup -1} and S/V is the ratio between solid surface S and fluid volume V. A value of activation energy of 73.5 kJ.mol{sup -1} is obtained in the case of magnetite, also consistent with mineral/solution processes. The second and major part of the thesis work is the realization of analogical experiments for simulating carbonation of basic and ultra basic minerals. Experiments were carried out on consolidated rock cores at 90 C and 280 bar of CO{sub 2} (low temperature experiments) and on powders contained in metallic capsules at 400-500 C and 1000-1700 bars of CO{sub 2} (high temperature experiments). The rate of mineral storage of CO{sub 2} was defined as the molar ratio of solid carbonate formed over total CO{sub 2} injected. It is of about 1% in three months in low temperature experiments whereas it reaches several tens of percents per hour in high temperature experiments. In all cases, carbonation is shown to proceed according to dissolution/precipitation mechanisms. A quasi stoichiometric coupling is evidenced between carbonation and (proto) serpentinization in high-temperature experiments. Newly formed carbonates are mostly magnesite MgCO{sub 3} with Fe and Ca in solid solution. In low temperature samples, the silicates are covered with a thin silica layer and with carbonate spherules consisting of ankerite CaFe(CO{sub 3}){sub 2} - dolomite CaMg(CO{sub 3}){sub 2} - siderite cores surrounded by magnesite overgrowth. In CO{sub 2}-saturated water, peridotites are more reactive than serpentinite and basalts, in accordance with thermodynamic modelling whereas serpentinites are the most reactive in the supercritical CO{sub 2} phase, showing stronger reactivities in this latter phase than in CO{sub 2}-saturated water. In high temperature experiments, the rate of mineral storage is larger at 400 C than at 500 C, in agreement with thermodynamic modelling of the system. High water fugacities and high fluid salinities are shown to have a positive effect on mineral storage rates. Isotopic mass balance of carbon have evidenced that about 15% of the mineral storage consist of a reduced carbon phase, also identified by transmission electron microscopy as an ill-organized graphite phase. (author)

  5. Mechanical behaviour and rupture in clayey rocks studied by x-ray micro tomography; Comportement mecanique et rupture dans les roches argileuses etudies par micro tomographie a rayons X

    Energy Technology Data Exchange (ETDEWEB)

    Lenoir, N

    2006-03-15

    Within the framework of feasibility studies of underground repositories for radioactive waste, the study of permeability evolution with damage of the host layer is crucial. The goals of this work were: (i) to characterize experimentally the damage of two clayey rocks (BEAUCAIRE MARL and EAST SHALE) with x-ray micro tomography, (ii) to develop a high pressure triaxial set-up adapted to permeability measurement on very low permeability rocks.A number of original triaxial devices have been realised to characterize damage of clayey rocks, under deviatoric loading, with x-ray micro tomography on a synchrotron beamline at the ESRF (Grenoble). Localized damage and its evolution have been characterized at a fine scale (of order of ten microns). Digital image correlation techniques, extended to 3d images, have been used to measure incremental strain fields from tomographic images. we demonstrated that these techniques are very useful in the study of the localized damage of geo-materials and especially for the initiation. A high pressure triaxial device has been realised to measure permeability evolution of the east shale as a function of applied stress (isotropic and deviatoric). The particularity of this set-up is the small size of the test specimen (cylinder of 10 mm in diameter and 20 mm in height) which allows significant reduction of test duration. (author)

  6. Processus métallogéniques associés aux interactions hydrothermales entre l'eau de mer et les roches ultrabasiques du manteau, exemple de la ride Médio-Atlantique

    OpenAIRE

    Evrard, Catherine

    2012-01-01

    In this thesis , we studied hydrothermal sulfides that form in ultramafic environments along the Mid-Atlantic ridge , to clarify mantle hydrothermal processes and metallogenic processes behind enrichments metal sulphides . At the regional level , vulnerabilities low angle detachment , which bear the mantle rocks outcrop , control fluid circulation , while the engine of hydrothermal convection is activated locally by gabbroic intrusions within the mantle rocks . Hydrothermal sulfides studied i...

  7. Composite microstructural anisotropies in reservoir rocks: consequences on elastic properties and relation with deformation; Anisotropies microstructurales composites dans les roches reservoir: consequences sur les proprietes elastiques et relation a la deformation

    Energy Technology Data Exchange (ETDEWEB)

    Louis, L.

    2003-10-15

    From diagenesis to tectonic stress induced deformation, rock microstructures always present some anisotropy associated with a preferential orientation, shape or spatial arrangement of its constituents. Considering the consequences anisotropy has on directional transport properties and compliance, as the geological history it carries, this approach has received a particular attention in numerous works. In this work, the microstructural features of various sedimentary rocks were investigated through direct observations and laboratory measurements in naturally deformed and undeformed blocks, samples being considered as effective media. All investigated samples were found to be anisotropic with respect to the physical properties we measured (i.e. ultrasonic P-wave velocity, magnetic susceptibility, electrical conductivity). Considering that P-wave velocities can be described by a second order tensor, we applied to the velocity data the same inversion procedure as the one routinely used in magnetic studies, which provided an efficient tool to estimate and compare these 3D anisotropies with respect to the original sample geographical position. In each case, we tried to identify as thoroughly as possible the microstructural source of the observed anisotropies, first by the mean of existing models, then through direct observations (optic and electronic microscopy). Depending on the rock investigated, anisotropy was found to be controlled by pore shape, intergranular contact distribution, preferentially oriented microcracks interacting with compaction pattern or pressure solution cleavages interacting with each other. The net result of this work is that P-wave velocity anisotropy can express the interaction between different microstructural features as well as their evolution during deformation. (author)

  8. Simulation of anions diffusion in Callovo-Oxfordian argillite by description of the rock microstructure; Modelisation de la diffusion des anions dans l'argilite du Callovo-oxfordien par description de la microstructure de la roche

    Energy Technology Data Exchange (ETDEWEB)

    Diaz, N. [CEA Saclay, Dept. de Physico-Chimie (DEN/DANS/DPC/SECR), 91 - Gif sur Yvette (France)

    2008-07-01

    The Callovo-Oxfordian argillite has been proposed as host rock for deep underground radioactive wastes storage. The aim of this study is to determine the report of effective diffusion coefficients De(anion)/De(water) at the micrometer scale considering the spatial distribution of minerals in the rock. (A.L.B.)

  9. Umbrella structure and channel-wall stoping in the Cambrian St. Roch Formation, Quebec Appalachians: significance for particle support mechanisms and turbulence development in hyper-concentrated sediment gravity flows

    Science.gov (United States)

    Hesse, Reinhard; Fong, Christopher

    2014-03-01

    Umbrella structure is a newly recognized sedimentary structure associated with large platy clasts in resedimented boulder-bearing pebble conglomerate with a sandy matrix. It consists of a sand rim that lacks pebbles on parts or the entire underside of platy boulders, whereas on the upper side, pebbles are in direct contact with the boulders. The depositing processes were high- to hyper-concentrated sediment gravity flows in a submarine channel or canyon on the Cambrian continental slope of North America bordering the Iapetus Ocean. The structure occurs predominantly where clasts dip moderately in the down-current direction. Based on the association of the structure with slightly forward dipping slabs, it is proposed that these down-current dipping slabs may have been in the process of counter-clockwise rotation that was aborted and may have generated a pressure shadow on the underside enabling the inrush of fluid and the infiltration of sand into the anomalous low-pressure zone. The structure has implications for particle support mechanisms in high- to hyper-concentrated sedimentary gravity flows, in that it redirects attention to the much debated mechanism of dispersive pressure and alternatives. It provides an observable sediment structure that supports dispersive pressure which so far depended on experimental evidence and theoretical arguments alone. Vrolijk and Southard's (1997) concept of a `laminar sheared layer' is here for the first time interpreted as having an upward-moving `free-surface' layer effect during deposition from hyper-concentrated flows. Channel-wall stoping involves unlithified turbiditic spillover sand in the levee sediment of the canyon wall that was washed out by the upper diluted parts of the high-concentration flows coming down the channel and leaving a niche in the wall that was filled with coarser channel-axis facies by the same flow (or later flows) when its aggradation reached the level of the niche. The contact between turbidite and pebble conglomerate occurs now more than 2 m laterally into the exposed channel wall. Channel-wall stoping tracks turbulence development in hyper-concentrated gravity flows.

  10. Water-rock interaction under peri-glacial conditions: example of the secondary carbonates of the Broegger Peninsula (Spitzbergen); Interactions eaux-roches en milieu periglaciaire: exemple des carbonates secondaires de la presqu`ile de Broegger (Spitzberg)

    Energy Technology Data Exchange (ETDEWEB)

    Marlin, C.; Dever, L. [Paris-11 Univ., 91 - Orsay (France). Laboratoire d`Hydrologie et de Geochimie Isotopique

    1998-12-31

    Measurements of the isotopic and chemical contents of soil water and carbonates at different field sites in Spitzbergen were undertaken to study the precipitation conditions of soil secondary calcites under the current peri-glacial climate. A main experimental site (`cote 80`) has been established located on a fluvio-glacial terrasse at 80 m.a.s.l. near Ny Alesund (79 deg N, 12 deg. E). The active layer is at around 1.2 m depth on a continuous permafrost. The soil temperatures measured every 5 cm from the surface to the permafrost show that the freezing fronts move both the surface and permafrost, converging at around 0.6 m depth where the system is closed. During the beginning of the freezing period, the solute content increases in the residual water according to the distribution coefficient between water and ice. Calcite precipitation occurs in a second stage as indicated by the simultaneous decrease of the calcite saturation index and increase of the concentration of non-interactive elements. Chemical and isotopic ({sup 18}O, {sup 2}H, {sup 13}C et {sup 14}C) analyses have been made on the different samples with a mineralogical description of the carbonate coatings obtained by SEM and microprobe analyses. The isotopic values result from a mixing between recent calcites and `old` calcites. The recent calcites are probably in isotopic equilibrium with the present day solutions. The `old calcites` have precipitated under colder conditions than today. The low radiocarbon activities (10.2 to 24.8 pcm) of the `cote 80` site indicate that the `old calcites` have precipitated during the last interglacial period or an inter-stadial period of the Pleistocene. The good relationship between the carbon- 14 activity and the carbon- 13 content indicates that the beginning of the pedogenesis is not identical at all sites and is dependent on the timing of deglaciation and vulnerability of rocks to frost-weathering. (authors) 18 refs.

  11. Disponibilité du nickel le long d'une toposéquence de sols développés sur roches ultramafiques de Nouvelle-Calédonie

    OpenAIRE

    Becquer,Thierry; Bourdon, Emmanuel; Pétard, Jean

    1995-01-01

    Les quantités de nickel facilement disponible extrait par KCl M et DTPA 0,005 M + CaCl2 0,01 M à pH 5,3 ont été déterminées dans deux types de sols oxydiques d'une toposéquence sur péridotites. Le premier appartient à un faciès de piedmont, le second à un faciès alluvio-colluvial. Il s'avère que les quantités de Ni extraites sont pratiquement nulles dans le premier type de sol, tandis qu'elles atteignent 120 microg/g de sol (NiDTPA) dans le second. Cette plus grande disponibilité dans le seco...

  12. Robaszynski, F. et Guyétant, G., coordination (2009). Des roches aux paysages dans le Nord - Pas-de-Calais. Richesse de notre patrimoine géologique

    OpenAIRE

    Pastre, Jean-François

    2009-01-01

    Cet ouvrage grand public propose la découverte de près de 450 millions d’années d’histoire géologique du Nord - Pas-de-Calais. Du Boulonnais à l’Avesnois, en passant par le bassin minier, l’Artois, la Flandre et les plaines maritimes, l’étude de vingt-cinq sites emblématiques du patrimoine géologique régional permet à différents spécialistes d’exposer les principales étapes de son évolution. Après la présentation de quelques bases pour aborder la géologie du Nord – Pas-de-Calais, un premier ...

  13. Comparison of the Hologic Aptima HIV-1 Quant Dx Assay to the Roche COBAS Ampliprep/COBAS TaqMan HIV-1 Test v2.0 for the quantification of HIV-1 RNA in plasma samples

    DEFF Research Database (Denmark)

    Schønning, Kristian; Johansen, Kim; Landt, Bodil

    2017-01-01

    of the Aptima HIV-1 Quant Dx Assay (Aptima) and the COBAS Ampliprep/COBAS TaqMan HIV-1 Test v2.0 (CAPCTMv2) for the quantification of HIV-1 RNA in plasma samples. STUDY DESIGN: The performance of the two tests was compared on 216 clinical plasma samples, on dilutions series in seven replicates of five clinical...

  14. Feasibility study for the installation of a small hydro electric power plant; Etude de faisabilite. Petite centrale hydro-electrique au lieu dit 'Sous les Roches' a Sonceboz

    Energy Technology Data Exchange (ETDEWEB)

    Tissot, N. [MHyLab, Mini-Hydraulics Laboratory, Montcherand (Switzerland); Hausmann, H. [Hans Hausmann, Bevilard (Switzerland)

    2003-07-01

    This report for the Swiss Federal Office of Energy presents a technical, economical and ecological analysis of the feasibility of a small hydroelectric power plant at Sonceboz, in the Swiss Jura mountains. The power of the planed plant would typically be 500 kW for a water head of about 10 m. The study shows that, compared to one single turbine, a pair of Kaplan type turbines would be operational over a larger range of the river's water flow rate. This solution would be a little bit more costly but offer more flexibility for maintenance. Two maximum water flow rates are considered, 4.5 and 6 m{sup 3}/s respectively. According to the economical study, done with current electric kWh prices, both configurations are viable while the largest flow rate leads to a larger profit. The report is rounded up by a sensitivity analysis considering variations in annual power generation, electro-mechanical and construction cost as well as turbine efficiency. It indicates that this last factor could be crucial for the overall profitability. [French] Ce rapport est le resultat detaille de l'analyse technico-economique et ecologique de faisabilite de la realisation d'une petite centrale hydroelectrique basse chute qui pourrait exploiter une denivellation d'environ 10 m pour une puissance de l'ordre de 500 kW pres de Sonceboz dans le Jura suisse. L'etude montre que le couplage de deux turbines Kaplan offrirait une possibilite de fonctionnement sur une plus grande plage de flux ainsi qu'une plus grande flexibilite de maintenance, ceci pour un cout legerement superieur a l'option a une seule turbine. Les debits de 4.5 et 6 m{sup 3}/s sont consideres. L'etude economique montre que le debit de 6 m{sup 3}/s est plus rentable au prix de vente actuel du kWh. L'article se termine par une analyse de sensibilite sur les incertitudes concernant la production annuelle, les prix de l'electromecanique et du genie civil et le rendement des turbines.

  15. Detecção do DNA de Chlamydia trachomatis em espondiloartropatias e artrite reumatóide Detection of Chlamydia trachomatis DNA in spondyloarthropathies and rheumatoid arthritis

    Directory of Open Access Journals (Sweden)

    Rafael Navarrete Fernandez

    2005-10-01

    Full Text Available Chlamydia trachomatis é a bactéria responsável pela doença sexualmente transmissível mais prevalente no mundo. A maioria das infecções em homens e mulheres é assintomática e, quando não diagnosticada e tratada, pode causar artrite e complicações relacionadas ao aparelho reprodutor feminino. OBJETIVO: pesquisar o DNA de C. trachomatis no líquido sinovial e urina de pacientes com espondiloartropatias e artrite reumatóide (AR, avaliar a presença de anticorpos séricos IgG e IgM anti-C. trachomatis nesses dois grupos de doenças e identificar o antígeno HLA-B27 em pacientes com espondiloartropatias. MÉTODOS: a população do estudo consistiu em 15 pacientes com espondiloartropatias: nove com espondiloartropatia indiferenciada (EI e seis com artrite reativa (ARe (grupo I e 15 pacientes com AR (grupo II. O DNA clamidial foi pesquisado em amostras de líquido sinovial e urina de todos os pacientes, empregando-se a PCR (Amplicor Roche, Suíça. Os anticorpos IgG e IgM anticlamidiais foram quantificados por imunofluorescência indireta (IFI, enquanto o HLA-B27 foi tipado em 15 pacientes do grupo I por citometria de fluxo. RESULTADOS: o DNA da C. trachomatis foi evidenciado apenas em uma amostra de líquido sinovial do grupo I (6,7%, sendo o paciente portador de ARe. Em dois pacientes com AR, o DNA clamidial foi identificado na urina (13,3%. Os anticorpos IgG anticlamidiais estavam presentes em oito pacientes da população estudada, três do grupo I (20% e cinco do grupo II (33,3%. O maior título desse anticorpo (1/256 associou-se com a presença do DNA clamidial na urina de um paciente do grupo II. O anticorpo IgM não foi detectado em nenhuma amostra dos dois grupos. O antígeno HLA-B27 foi positivo em quatro indivíduos do grupo II (26,7% e sua presença relacionou-se com sacroileíte. CONCLUSÕES: os resultados deste estudo indicam que em pacientes com diagnóstico de espondiloartropatias e artrite reumatóide, com quadro articular

  16. Carga viral vaginal de HIV em mulheres brasileiras infectadas pelo HIV HIV vaginal viral load in Brazilian HIV-infected women

    Directory of Open Access Journals (Sweden)

    Angela Campos

    2008-02-01

    Full Text Available OBJETIVO: Avaliar os fatores associados à presença de RNA-HIV na vagina. MÉTODOS: Estudo de corte transversal, em mulheres infectadas por HIV, excluindo-se aquelas com antecedente de histerectomia, as em uso de medicações vaginais nas últimas 48 horas, as que se referiram à relação sexual desprotegida há menos de 72 horas, as gestantes e aquelas com sangramento genital. Após consentimento, coletou-se amostra sanguínea para contagem de linfócitos T CD4 e carga viral plasmática de HIV, além de lavado vaginal com 10mL de solução salina, que foi centrifugado, aliquotado e armazenado em freezer -70°C para posterior quantificação de RNA-HIV livre. A mensuração de carga viral de RNA-HIV livre plasmática e vaginal foi realizada utilizando-se o kit HIV Monitor v1.5 Cobas Amplicor®, Roche. Pesquisou-se a presença de HPV de alto e baixo risco, clamídia e gonococo por Captura Híbrida II®, Digene, em amostra endocervical. Colheu-se amostra vaginal para bacterioscopia com coloração de Gram, utilizando-se os critérios de Nugent. RESULTADOS: Entre as 200 mulheres estudadas, 73,5% usavam terapia anti-retroviral (TARV com drogas múltiplas. O RNA-HIV foi detectável no lavado vaginal de 18 delas (9%, mas em apenas uma daquelas que tinham carga viral plasmática indetectável (0,5%. A prevalência de HIV vaginal foi 24 vezes maior naquelas em que HIV plasmático era detectável. Carga viral plasmática de HIV, não usar TARV, CD4 reduzido e vaginose bacteriana aumentaram a prevalência de RNA-HIV vaginal, mas apenas a carga viral plasmática se manteve significativa na análise ajustada. CONCLUSÃO: A prevalência de RNA-HIV vaginal foi baixa (9%. A carga viral acima de 1.500 cópias/mL foi a única variável que permaneceu como fator de risco para RNA-HIV vaginal livre.OBJECTIVE: To evaluate factors associated to presence of free RNA-HIV in the vagina. METHODS: Cross-sectional study with HIV-infected women, excluding those who had

  17. Trachoma prevalence and associated risk factors in the gambia and Tanzania: baseline results of a cluster randomised controlled trial.

    Directory of Open Access Journals (Sweden)

    Emma M Harding-Esch

    Full Text Available BACKGROUND: Blinding trachoma, caused by ocular infection with Chlamydia trachomatis, is targeted for global elimination by 2020. Knowledge of risk factors can help target control interventions. METHODOLOGY/PRINCIPAL FINDINGS: As part of a cluster randomised controlled trial, we assessed the baseline prevalence of, and risk factors for, active trachoma and ocular C. trachomatis infection in randomly selected children aged 0-5 years from 48 Gambian and 36 Tanzanian communities. Both children's eyes were examined according to the World Health Organization (WHO simplified grading system, and an ocular swab was taken from each child's right eye and processed by Amplicor polymerase chain reaction to test for the presence of C. trachomatis DNA. Prevalence of active trachoma was 6.7% (335/5033 in The Gambia and 32.3% (1008/3122 in Tanzania. The countries' corresponding Amplicor positive prevalences were 0.8% and 21.9%. After adjustment, risk factors for follicular trachoma (TF in both countries were ocular or nasal discharge, a low level of household head education, and being aged ≥ 1 year. Additional risk factors in Tanzania were flies on the child's face, being Amplicor positive, and crowding (the number of children per household. The risk factors for being Amplicor positive in Tanzania were similar to those for TF, with the exclusion of flies and crowding. In The Gambia, only ocular discharge was associated with being Amplicor positive. CONCLUSIONS/SIGNIFICANCE: These results indicate that although the prevalence of active trachoma and Amplicor positives were very different between the two countries, the risk factors for active trachoma were similar but those for being Amplicor positive were different. The lack of an association between being Amplicor positive and TF in The Gambia highlights the poor correlation between the presence of trachoma clinical signs and evidence of C. trachomatis infection in this setting. Only ocular discharge was

  18. 77 FR 15779 - Medical Devices; Availability of Safety and Effectiveness Summaries for Premarket Approval...

    Science.gov (United States)

    2012-03-16

    ...% sodium October 11, 2011. Pharmaceuticals, Inc. hyaluronate). P110022, FDA-2011-M-0786 Roche Diagnostics... November 30, 2011. kit. P110025, FDA-2011-M-0917 Roche Diagnostics ELECSYS anti-HBC IGM December 14, 2011...

  19. Ravimid, risk, raha & tervis / Inge Pitsner

    Index Scriptorium Estoniae

    Pitsner, Inge

    2008-01-01

    Ravimifirma Roche Eesti OÜ tegevjuht Kadri Mägi selgitab ravimiäri toimemehhanisme ning põhjuseid, miks ravimitööstus on riskantne ja kallis valdkond. Lisa: Mis on farmakoökonoomika?; Roche Eesti kontor

  20. Ravimid, risk, raha & tervis / Inge Pitsner

    Index Scriptorium Estoniae

    Pitsner, Inge

    2008-01-01

    Ravimifirma Roche Eesti OÜ tegevjuht Kadri Mägi selgitab ravimiäri toimemehhanisme ning põhjuseid, miks ravimitööstus on riskantne ja kallis valdkond. Lisa: Mis on farmakoökonoomika?; Roche Eesti kontor

  1. Febrile Neutropenia Risk Assessment and Granulocyte-Colony Stimulating Factor Support in Patients with Diffuse Large B Cell Lymphoma Receiving R-CHOP Regimens

    DEFF Research Database (Denmark)

    Salar, Antonio; Haioun, Corinne; Rossi, Francesca Gaia;

    2009-01-01

    Disclosures: Salar: Amgen: Honoraria. Haioun: Roche: Research Funding; Amgen: Other, Research Funding; Celgene: Other, Research Funding; Mundipharma: Research Funding. Pettengell: Amgen: Honoraria, Speakers Bureau; Roche: Honoraria, Speakers Bureau; Bayer: Honoraria, Speakers Bureau. Jaeger: Amgen: Research...

  2. 76 FR 65210 - Certain Products and Pharmaceutical Compositions Containing Recombinant Human Erythropoetin...

    Science.gov (United States)

    2011-10-20

    ..., Germany, and Hoffman La Roche Inc. of Nutley, New Jersey (collectively, ``Roche'') as respondents. After... opinion, the facts of the 588 investigation are readily distinguished from the facts here. Amgen and Roche... the unusual facts of this investigation. Nor is the Commission itself aware of any such basis...

  3. Hepatitis B virus markers in anti-HBc only positive individuals.

    Science.gov (United States)

    Weber, B; Melchior, W; Gehrke, R; Doerr, H W; Berger, A; Rabenau, H

    2001-07-01

    Isolated reactivity to hepatitis B virus (HBV) core antigen (anti-HBc) is observed relatively frequently in immunocompromised individuals, intravenous drug abusers (IVDA), and in the presence of HCV infection. The reason for the lack of HBsAg is not clear. The aim of the present study was to investigate which factors (genetic variability of S gene, low-level HBsAg, and immune complexes may be responsible for the failure of HBsAg detection with commercial HBsAg screening assays. Dilution series of two recombinant HBsAg escape mutants and dilutions of serum samples from chronic HBV carriers with multiple insertions in the a determinant and different HBsAg subtypes were tested with a highly sensitive assay that detects wild-type HBsAg (Elecsys HBsAg, Roche Diagnostics, Penzberg, Germany) and two assays that detect HBV wild-type and escape mutants (Murex HBsAg Version 3, Murex and Enzygnost HBsAg 5.0, Dade Behring, Marburg, Germany). Elecsys HBsAg showed in comparison to Murex HBsAg Version 3 and Enzygnost HBsAg 5.0 a reduced sensitivity for escape mutant detection. On the other hand, the best performance for HBsAg subtype detection was obtained with Elecsys HBsAg. In the second part of the study, a selected panel of isolated anti-HBc reactive (n = 104) serum samples (AxSYM Core) was submitted to testing by Elecsys HBsAg, Murex HBsAg Version 3, Enzygnost HBsAg 5.0, and HBsAg detection after immune complex dissociation (ICD) and anti-HBs determination with two different assays (AxSYM Ausab and Elecsys Anti-HBs). To assess the specificity of anti-HBc test results, all the samples were tested by a second anti-HBc assay (Elecsys Anti-HBc). Quantitative HBV DNA detection was undertaken with a commercially available HBV PCR assay (Amplicor HBV Monitor). HCV infection was present in 65.4% of anti-HBc only reactive individuals. Five AxSYM Core positive samples were negative by Elecsys Anti-HBc. Overall, 15 (14.4%) AxSYM Ausab negative samples gave positive results with Elecsys

  4. HBV and neurological impairment in HIV-infected patients

    Directory of Open Access Journals (Sweden)

    L Manolescu

    2012-11-01

    Full Text Available Objective: HIV can affect CNS in early stages of disease and determine neurological impairment. HBV DNA was found in CSF of HIV co-infected patients, but little is known about the neurotropic character of this virus. Here we assessed the degree of association between HBV infection and neurological impairment in a large cohort of long-term survivors, HIV-infected patients that experienced multiple therapeutic schemes over time. Methods: A total of 462 HIV-1-infected patients were retrospectively followed up for 10 years for HBV infection and neurological impairment. The patients were tested for immune (flow cytometry and virological parameters of HIV infection (Roche Amplicor, version 1.5/ COBAS AmpliPrep/COBAS TaqMan HIV-1 test and for HBV infection markers (HBsAg, anti HBc: Murex Biotech ELISA tests. Many of these patients have experienced between one and six regimens such as: 2 NRTIs, 3 NRTIs, 2 NRTIs+1 NNRTI, 1 NRTI+1 NNRTI+1 PI, 2 NRTIs+2 PIs. Results: After 10 years 29.87% of the patients presented neurological impairment. Out of them 56.52% were HBV-infected. The prevalence of HIV encephalopathy (HE in our studied cohort was 22.7% and 50.4% of these patients were HBV-infected. The median HIV diagnosis age was 7 and the median age of HE diagnosis was 10. In order to establish a possible correlation between HBV infection and HE we first reviewed and excluded the main risk factors associated with HE at the moment of diagnosis: low weight, anemia, constitutional symptoms, low CD4+count, high plasma HIV-RNA load. No patient was infected with HCV. The groups of patients that presented HE and HBsAg and HE without HBsAg were balanced regarding sex, number of deceased patients, number of class C3 patients, but the patients in first group presented lower CD4 values at HE diagnosis vs patients from second group 2: 44.5 vs 95 cells/µL, p=0.3; lower nadir CD4 count: 38 vs 51 cell/µL, p=0.1; and slightly higher HIV viral load: 5.2 vs 5 log10 copies

  5. Benefit of hepatitis C virus core antigen assay in prediction of therapeutic response to interferon and ribavirin combination therapy.

    Science.gov (United States)

    Takahashi, Masahiko; Saito, Hidetsugu; Higashimoto, Makiko; Atsukawa, Kazuhiro; Ishii, Hiromasa

    2005-01-01

    A highly sensitive second-generation hepatitis C virus (HCV) core antigen assay has recently been developed. We compared viral disappearance and first-phase kinetics between commercially available core antigen (Ag) assays, Lumipulse Ortho HCV Ag (Lumipulse-Ag), and a quantitative HCV RNA PCR assay, Cobas Amplicor HCV Monitor test, version 2 (Amplicor M), to estimate the predictive benefit of a sustained viral response (SVR) and non-SVR in 44 genotype 1b patients treated with interferon (IFN) and ribavirin. HCV core Ag negativity could predict SVR on day 1 (sensitivity = 100%, specificity = 85.0%, accuracy = 86.4%), whereas RNA negativity could predict SVR on day 7 (sensitivity = 100%, specificity = 87.2%, accuracy = 88.6%). None of the patients who had detectable serum core Ag or RNA on day 14 achieved SVR (specificity = 100%). The predictive accuracy on day 14 was higher by RNA negativity (93.2%) than that by core Ag negativity (75.0%). The combined predictive criterion of both viral load decline during the first 24 h and basal viral load was also predictive for SVR; the sensitivities of Lumipulse-Ag and Amplicor-M were 45.5 and 47.6%, respectively, and the specificity was 100%. Amplicor-M had better predictive accuracy than Lumipulse-Ag in 2-week disappearance tests because it had better sensitivity. On the other hand, estimates of kinetic parameters were similar regardless of the detection method. Although the correlations between Lumipulse-Ag and Amplicor-M were good both before and 24 h after IFN administration, HCV core Ag seemed to be relatively lower 24 h after IFN administration than before administration. Lumipulse-Ag seems to be useful for detecting the HCV concentration during IFN therapy; however, we still need to understand the characteristics of the assay.

  6. Temperature effect on the poro-mechanical or hydraulic behaviour of a carbonated rock and a mortar: experimental studies; Influence de la temperature sur le comportement poromecanique ou hydraulique d'une roche carbonatee et d'un mortier: etudes experimentales

    Energy Technology Data Exchange (ETDEWEB)

    Lion, M

    2004-07-15

    The main objective of this study is to evaluate the temperature effect on the hydraulic and poro-mechanical behaviour of a limestone. Many experimental tests (porosity and permeability measurements, uniaxial and hydrostatic compressions tests) were carried out in order to study the thermal treatments effect and so the thermal microcracking effect on rock behaviour. Moreover, an experimental device for permeability measurements under high temperatures (until 200 C) was realized. This experimental device permitted to study the permeability variation of the limestone under thermal stresses. Finally, the behaviour of cementitious materials was studied; the temperature effect on the permeability of a mortar was examined. (author)

  7. Large-scale column experiment: study of CO{sub 2}, pore water rock reactions and model test case; Experimentation de longue duree sur grandes colonnes, dans le contexte du stockage geologique de CO{sub 2}: etude des interactions eau-roche et modelisation

    Energy Technology Data Exchange (ETDEWEB)

    Bateman, K.; Turner, G.; Pearce, J.M.; Noy, D.J.; Birchall, D.; Rochelle, C.A. [British Geological Survey, Kingsley Dunham Centre, Keyworth (United Kingdom)

    2005-07-01

    During underground carbon dioxide (CO{sub 2}) storage operations in deep reservoirs, the CO{sub 2} can be trapped in three ways; - as 'free' CO{sub 2}, most likely as a supercritical phase (physical trapping); - dissolved in formation water (hydrodynamic trapping); - precipitated in carbonate phases such as calcite (mineral trapping). This study focuses on the reactions between CO{sub 2}, pore-water and host rock. The aim of this work was to provide a well-constrained long-term laboratory experiment reacting known quantities of minerals with CO{sub 2}-rich fluids, in order to try and represent situations where CO{sub 2} is being injected into lithologies deep underground. The experimental results can then be used as a test case with which to help validate predictive geochemical computer models. These will help improve our ability to predict the long-term fate of carbon dioxide (CO{sub 2}) stored underground. The experiment, though complex in terms of equipment, ran for approximately 7.5 months. The reacted material was then examined for mineralogical changes and the collected fluids analysed to provide data on the fate of the dissolved species. Changes were readily observable on the carbonates present in the starting material, which matches well with the observed trends in the fluid chemistry. However, although changes in silica concentrations were seen in the fluid chemistry no evidence for pitting or etching was noted in the silica bearing phases. Modelling of the experimental systems was performed using the BGS coupled code, PRECIP. As a general conclusion, the model predictions tend to over estimate the degree of reaction compared with the results from the experiment. In particular, some mineral phases (e.g. dawsonite) that are predicted to form in large quantities by the model are not seen at all in the experimental system. The differences between the model predictions and the experimental observations highlight the need for thermodynamic and kinetic data to be available under appropriate conditions (pH, and chemical composition of the fluid as well as temperature, and pressure), as extrapolation or 'best guesses' may lead to errors being induced in the predictions. These errors and gaps in the data become obvious when comparing model predictions with experiments which serves to emphasize the importance of having 'test cases' with which the models can be validated. (authors)

  8. Erosion of the Alps: use of Rb-Sr isotopic data from molassic sediments to identify the ages of the metamorphism recorded by the eroded rocks; Erosion des Alpes: histoire metamorphique des roches erodees par l`analyse du couple Rb-Sr des sediments molassiques

    Energy Technology Data Exchange (ETDEWEB)

    Henry, P.; Deloule, E. [Centre National de la Recherche Scientifique (CNRS), 54 - Nancy (France). Centre de Recherches Petrographiques et Geochimiques; Michard, A. [Aix-Marseille-3 Univ., 13 - Marseille (France)

    1994-06-01

    Rb-Sr isotopic data from Oligocene and Miocene peri-alpine molassic sediments allow us to identify the different periods for which the eroded rocks have or have not recorded an alpine metamorphism. The Chattian and the Burdigalian sediments result from the erosion of rocks for which the latest metamorphic event was variscan, while the Stampian, Aquitanian and ``Helvetian`` sediments show evidence for the erosion of rocks which have recorded alpine metamorphic events. The application of this method to old detrital sediments could permit determination of the ages of the tectonic events which occurred in the sediment source regions. (authors). 18 refs., 6 figs.

  9. From Injectivity to Integrity Studies of CO{sub 2} Geological Storage Chemical Alteration Effects on Carbonates Petrophysical and Geomechanical Properties; Caracterisation de l'injectivite et de l'integrite d'un stockage geologique de CO{sub 2}: Effets d'une alteration chimique sur les proprietes petrophysiques et geomecaniques des roches carbonatees

    Energy Technology Data Exchange (ETDEWEB)

    Bemer, E.; Lombard, J.M. [Institut francais du petrole, IFP, 92 - Rueil-Malmaison (France)

    2010-05-15

    The technical and economical success of a CO{sub 2} geological storage project requires the preservation of the site injectivity and integrity properties over its lifetime. Unlike conventional hydrocarbon gas injection, CO{sub 2} injection implies geochemical reactions between the reactive brine and the in situ formations (reservoir and cap rock) leading to modifications of their petrophysical and geomechanical properties. This paper underlines the experimental difficulties raised by the low permeability of samples representative either of the cap rock itself or at least of transition zones between the reservoir and the effective cap rock. Acidification effects induced by CO{sub 2} injection have been studied using an experimental procedure of chemical alteration, which ensures a homogeneous dissolution pattern throughout the rock sample and especially avoids any worm-holing process that would lead to erroneous measurements at the core scale. Porosity, permeability and geomechanical properties of outcrop and field carbonate samples of various permeability levels have been measured under their native state and different levels of alteration. The present work has been conducted within the framework of ANR GeoCarbone-INJECTIVITY and GeoCarbone-INTEGRITY projects. Each experimental step: chemical alteration, petrophysical measurements and geomechanical testing, is considered from the point of view of injectivity and integrity issues. The obtained experimental data show clear trends of chemically induced mechanical weakening. (authors)

  10. Temperature effect on the poro-mechanical or hydraulic behaviour of a carbonated rock and a mortar: experimental studies; Influence de la temperature sur le comportement poromecanique ou hydraulique d'une roche carbonatee et d'un mortier: etudes experimentales

    Energy Technology Data Exchange (ETDEWEB)

    Lion, M

    2004-07-15

    The main objective of this study is to evaluate the temperature effect on the hydraulic and poro-mechanical behaviour of a limestone. Many experimental tests (porosity and permeability measurements, uniaxial and hydrostatic compressions tests) were carried out in order to study the thermal treatments effect and so the thermal microcracking effect on rock behaviour. Moreover, an experimental device for permeability measurements under high temperatures (until 200 C) was realized. This experimental device permitted to study the permeability variation of the limestone under thermal stresses. Finally, the behaviour of cementitious materials was studied; the temperature effect on the permeability of a mortar was examined. (author)

  11. The natural seismic hazard and induced seismicity of the european HDR (hot dry rock) geothermal energy project at Soultz-sous-Forets (Bas-Rhin, France); Alea sismique naturel et sismicite induite du projet geothermique europeen RCS (roche chaude seche) de Soultz-sous-Forets (Bas-Rhin, France)

    Energy Technology Data Exchange (ETDEWEB)

    Helm, J.A.

    1996-06-07

    Development of the Soultz-sous-Forets HDR (Hot Dry Rock) geothermal energy project will involve important fluid injections which will induce micro-seismic events. This thesis discusses the natural seismicity of the region and induced seismicity associated with fluid injections. A catalogue of all historical and instrument seismicity of the Soultz-sous-Forets (SSF) region has been compiled. This seismicity does not correspond to movements along the major tectonic features of the region. The area around SSF has been identified as being one where high heat flow corresponds to low seismicity. The largest well documented seismic event in the region which took place in 1952 had an epicentral intensity of VI. All important data pertaining to the series of seismic events which took place in the region from August to October 1952 have been collected and are presented. This work details the installation and operation of a permanent 3 station network of accelerometers and seismometers around the HDR site. Also the installation and operation of a mobile network of vertical seismometers during fluid injections. 167 micro-seismic events were recorded on the surface network, with magnitudes from -0.5 to 1.9. The preferential alignment of the micro-seismic cloud is N160 deg. Individual focal mechanisms of the larger seismic events correspond to an extensional tectonic regime. Stress inversion of P wave polarities indicates that the maximum stress is vertical and the intermediate and minimum stress axes horizontal. The largest of the horizontal stresses is orientated N124 deg and the smallest N34 deg. Induced seismic movement is taking place on pre-existing fractures controlled by the in situ stress seismic movement is taking place on pre-existing tectonic fractures controlled by the in situ stress field, and the largest of the induced events had a magnitude 1.9. This level of seismicity does not pose any environmental hazard to the region around Soultz-sous-Forets. (author) 151 refs.

  12. Modelling the effective diffusion coefficient of anions in Callovo-Oxfordian argillite knowing the microstructure of the rock; Modelisation predictive de la migration des anions par description de la microstructure de la roche: application a l'argilite du Callovo-Oxfordien

    Energy Technology Data Exchange (ETDEWEB)

    Diaz, N.

    2009-02-06

    After having presented the issue of radioactive waste storage, the concept of geological storage and its application in the Meuse/Haute-Marne underground laboratory, and described the Callovo-Oxfordian geological formation and the argillite transport properties, this research thesis aims at developing a prediction of these properties at a macroscopic scale for water and anions. A first part presents the different experimental means implemented to acquire the diffusion coefficients for the studied materials (Callovo-Oxfordian argillite and purified Puy illite), and the spatial organisation of minerals by LIBS probe-based mapping to highlight a relationship between rock microstructure and its transport macroscopic properties. The next part presents the models which have been developed at the nanometer and micrometre scale to predict the diffusion coefficients. Experimental results are then compared with computed values

  13. Numerical modeling of damage and permeability interaction in rocks. Application for the radioactive waste storage in deep galleries; Modelisation numerique du couplage entre l'endommagement et la permeabilite des roches. Application a l'etude des ouvrages de stockage souterrain

    Energy Technology Data Exchange (ETDEWEB)

    Maleki, K

    2004-03-15

    The relation between damage and permeability in rocks is a very important subject in industrial applications. It is for example the case of cracks around the radioactive waste storage galleries (EDZ) which can rise considerably the permeability and so make a serious problem for the sealing and the safety of these structures. The same phenomena can occur in the surrounding concrete wall of the nuclear power stations and also in the cracking of the oil-bearing rocks reservoirs. The experimental research on this subject, specially in laboratory G.3S-LMS in Ecole Polytechnique made it possible to determine the orders of damage effect on the permeability change. But a numerical modeling of these phenomena for setting a constitutive behavior law was to be done. This is the principal objective of this thesis. In this project, at first the notion of crack damage is defined. This type of damage is modeled by the disc shaped crack distribution in the 3D space. The disc's geometrical characteristics (radius, direction and opening) obey the statistical distribution laws, depending on the type of loading (compression or extension). The upper and lower limits of the characteristics are fixed according to actual observations, carried out on clay-stone (host rock selected for the realization of an underground research laboratory in Bure). In order to modeling the damage in the porous media, the double porosity concept is considered. A method of homogenization is used to simulate the flow through the network of cracks and porosity. It allows to derive the equivalent permeability of the fractured porous media. The study of the correlations between permeability and damage, obtained by this method for various values of fracture density, made it possible to obtain a relation between permeability and crack damage, for classical types of loading as simple extension and simple compression. To generalize this relation in the case of any specified triaxial loading, the crack damage is put in relation with the notion of mechanical damage, resulting from a mechanical model connecting the damage to stress and strain. Finally, the poro-mechanical behavior law with damage is implemented to the finite elements computer program ESAR-LCPC The modeling of an underground gallery proved that damage calculation by this method is feasible and allows to compute the evolution of the permeability and the variation of the flow entering the gallery as a function of this damage. (author)

  14. Relations entre les types de dépôts évaporitiques et la présence de couches riches en matière organique (roches-mères potentielles Relationship Between Different Types of Evaporitic Deposits and the Occurrence of Organic-Rich Layers (Potential Source Rocks

    Directory of Open Access Journals (Sweden)

    Busson G.

    2006-11-01

    Full Text Available La fertilité exceptionnelle des eaux salées est confirmée par des études récentes sur l'Actuel (marais salants de Méditerranée occidentale. Le benthos est représenté par des mollusques, foraminifères, ostracodes et surtout des cyanophycées et des populations bactériennes ; le plancton par le microphytoplancton (Dunaliella, diatomées, etc, par le zooplancton (flagellés, Arternia salina et par de très nombreuses bactéries hétérotrophes. Si les espèces sont d'autant plus rares que la salinité est élevée, la prolifération des formes adaptées peut atteindre des valeurs supérieures à celles réalisées dans la plupart des autres milieux. On rappelle ensuite l'efficacité des systèmes d'eaux stratifiées pour la conservation de la matière organique originellement élaborée dans l'eau photique et oxygénée. Ces systèmes peuvent s'accompagner de proliférations bactériennes photosynthétiques exposées à des mortalités en masse pouvant être responsables de véritables lamines organiques. Dans les évaporites de plates-formes où la ségrégation des salinités et des dépôts a été synchrone et latérale, la tranche d'eau a dû être faible et, de ce fait, peu favorable à l'établissement de systèmes d'eaux stratifiées et surtout à leur pérennité géologique. Ces accumulations s'avèrent donc en général pauvres en matière organique, de même qu'elles ne s'accompagnent pas d'appareils récifaux abondants. Dans les évaporites de centre de cuvette, les dépôts sont imputables à une succession de phases de salinité croissante dans le temps : calcaires sur les zones hautes, contemporains de minces couches à matière organique dans les dépressions ; sulfate de calcium sur les aires d'épaisseur moyenne pouvant être encore contemporain de couche à matière organique dans les aires déprimées ; enfin, remplissage par la halite des zones centrales profondes et déprimées. A ces phases successives, se superposent - au moins au cours de la formation des carbonates, puis des sulfates - des gradients de salinité verticaux (système d'eaux stratifiées. Cartographiquement, ces dépôts ont une polarité salin croissant centripète . Quand elles sont situées en contexte carbonaté, ces évaporites de centre de cuvette s'accompagnent fréquemment d'appareils récifaux pouvant fourmiller dans toute une ceinture annulaire (cf. Salina du Silurien du Michigan. Grâce aux minces couches à matière organique des zones déprimées, grâce aux appareils récifaux et grâce à la couverture salifère, ces bassins ont souvent une certaine prolificité en hydrocarbures. Le troisième type correspond aux évaporites de marge de bassin. Dans ce dispositif, le centre du bassin est resté affamé - voire insatiable - pendant de longues périodes. La sédimentation y est restée marine, souvent caractérisée par la seule présence du plancton et du necton et par une richesse plus ou moins permanente en matière organique. Autour de la cuvette s'organisent, sur des plates-formes marginales parfois fort étendues, des appareils construits (bancs ou récifs, puis des faciès lagunaires, carbonatés et évaporitiques et enfin des détritiques continentaux. Les dépôts montrent une polarité salin croissant centrifuge irréductiblement opposée à la polarité inverse des dépôts de centre de cuvette. Le déficit en les sels les plus solubles est remarquable voire considérable, impliquant le reflux de saumures en profondeur à partir de ces annexes évaporatoires qu'ont dû constituer ces plates-formes d'arrière-récifs. L'appel d'eau à partir de ces annexes évaporatoires n'a pu qu'amener un afflux permanent de nutriments dans tout le bassin. Le reflux des saumures quant à lui a favorisé la pérennité d'un système à deux corps d'eau. Grâce à cet ajustement et à la pérennité du système, la prolificité de tels bassins en matière organique a pu être extrêmement importante. Les évaporites de marge de bassin avec couches à matière organique au centre correspondent à une période prolongée. C'est l'essentiel de la vie du bassin. Le remplissage de la cuvette centrale par des évaporites de centre de bassin peut être un épisode bref et qui peut entraîner la disparition même du bassin. Les évaporites de plate-forme s'étalant indifféremment sur l'ancien domaine du bassin comme sur celui des anciennes plates-formes marginales peuvent être l'aube d'un nouveau cycle sédimentaire, indifférent au passé. The extraordinary fertility of saline waters has been confirmed by recent studies of salterns in the western Mediterranean. The benthos contains mollusks, foraminifers, ostracodes and especially Cyanophyceae and bacterial populations. Plankton includes microphytoplankton (Dunaliella, diatoms, etc. , zooplankton (flagellates, Artemia salina and numerous heterotrophic bacteria. Where diversity is low when salinity is high, the proliferation of well adapted forms can be greater than the productivity levels observed in most other environments. The effectiveness of stratified water bodies for the preservation of organic matter originally produced in photic and oxygenated water is brought out. Such stratified systems may be accompanied by the proliferation of photosynthetic bacteria that are exposed to sporadic mass mortality, resulting in the formation of organic laminae at the bottom. In shelf (or epeiric evaporites, where the segregation of salinities and deposits has been synchronous and lateral, the water depth must have been shallow and hence unsuitable for the formation of stratified water bodies and especially for their geological duration. Such accumulations thus generally have a low organic content, and they also do not have abundant reef systems. In basin-center evaporites, the deposits are attributed to a succession of phases of increasing salinity in time, i. e. limestone in high areas, contemporaneous with thin organic-rich layers in low areas (hollows, calcium sulfate in medium-thickness areas which may also be contemporaneous with organicrich layers in low areas, followed by infilling by halite in deep and low-lying central areas. Superposed on these successive phases - at least during the formation of carbonates then sulfates - are vertical salinity gradients (stratified water system. When mapped, such deposits have a centripetal increasing saline polarity. When they are situated in a carbonate context, such basin-center evaporites are often associated with reef systems that may have thrived as a ring-like belt (cf. Silurian Salina, Michigan. Because of the thin organic-rich layers in low-lying areas, reef systems and the salt overburden, such basins are often prolific with hydrocarbons. The third type of evaporitic deposits is represented by basin-margin evaporites. In such a system, the basin center remains starved - even insatiable - for long periods of time. Sedimentation remains marine, often characterized by the presence of plankton and nekton alone and by a more or less constantly high organic content. Around the basin, marginal shelves are built and are even sometimes quite wide, accompagnied by built-up systems (banks or reefs, then by lagoonal, carbonate and evaporitic facies, and finally by continental detritals. The deposits have a centrifugal increasing saline polarity that is irreducibly opposed to the reverse polarity of the basin-center deposits. The deficit in the most soluble salts is significant, even considerable, involving brine outflow downward from these evaporitic appendages that must have been formed by the back-reef shelves. The inflow of water from these evaporitic appendages can only be constantly accompanied by nutrients throughout the entire basin. The outflow of brines enhances the continuing existence of a system with two water bodies. Because of this adjustment and the durable nature of the system, the prolificity of such basins in organic matter may have been extremely high. The basin margin evaporites with organic-rich in the center indicate that the process was a long one. This is the main life of the basin. The filling of the central part by basin-center evaporites may be a brief episode and may even result in the very disappearance of the basin. The shelf evaporites spreading on both the former basin area and the former marginal shelves may be the start of new sedimentary cycle without any connection to the past.

  15. Experimental study of chemical-mechanical coupling during percolation of reactive fluid through rocks under stress, in the context of the CO{sub 2} geological sequestration; Etude experimentale du couplage chimie-mecanique lors de la percolation d'un fluide reactif dans des roches sous contrainte, dans le contexte de la sequestration geologique du CO{sub 2}

    Energy Technology Data Exchange (ETDEWEB)

    Le Guen, Y

    2006-10-15

    CO{sub 2} injection into geological repositories will induce chemical and mechanical instabilities. The study of these instabilities is based on experimental deformation of natural rock samples under stress, in the presence of fluids containing, or not, dissolved CO{sub 2}. Triaxial cells used for the experiments permitted an independent control and measurement of stress, temperature, fluid pressure and composition. Vertical strains were measured during several months, with a resolution of 1.10{sup -12} s{sup -1} on the strain rate. Simultaneously, fluids were analysed in order to quantify fluid-rock interactions. For limestone samples, percolation of CO{sub 2}-rich fluids increases strain rate by a factor 1.7 up to 5; on the other hand, sandstone deformation remained almost the same. Increase in strain rate with limestone samples was explained by injected water acidification by the CO{sub 2} which increases rock solubility and reaction kinetics. On the opposite, small effect of CO{sub 2} on quartz explains the absence of deformation. X-ray observations confirmed the importance of rock composition and structure on the porosity evolution. Numerical simulations of rock elastic properties showed increasing shear stress into the sample. Measured deformation showed an evolution of reservoir rocks mechanical properties. It was interpreted as the consequence of pressure solution mechanisms both at grains contacts and on grain free surfaces. (author)

  16. Study of the reactive processes during CO{sub 2} injection into sedimentary reservoirs: Experimental quantification of the processes at meso-scale; Quantification experimentale a l'echelle mesoscopique des processus reactionnels dans le cadre de l'injection de CO{sub 2} dans des roches carbonatees et silicatees

    Energy Technology Data Exchange (ETDEWEB)

    Luquot, L.

    2008-11-15

    In order to minimize CO{sub 2} atmospheric concentration, a solution consists in sequestrating CO{sub 2} in geological reservoirs. To estimate long term risks, it is necessary to quantify the couplings between reaction processes as well as structural and hydrodynamical modifications. We realised two experimental benches enabling injecting CO{sub 2}-enriched-brine in conditions corresponding to in situ storage (T {<=} 200 C and P {<=} 200 bar) and developed an experimental protocol using X-Ray microtomography and fluid and rock analyses in order to measure the variations of physical and chemical parameters. The study of carbonated reservoirs near the injection well, allows quantifying different k-phi relationships depending on the dissolution processes and triggered by the local fluid chemical composition and initials conditions. Away from the injection well, we observe carbonate precipitation decreasing the permeability. The study of fractured cap-rock samples shows that alternative percolation of CO{sub 2}-enriched-brine and CO{sub 2} gas increases the fracture permeability. The study of silicated rocks indicates carbonate precipitation in zeolite sandstone and sintered dunite grains. Nevertheless, in zeolite sandstone we also observe the precipitation of clay particles located in the fluid pathways which decrease strongly the permeability. (author)

  17. Sequence analysis and genotyping of genital Chlamydia trachomatis among patients with suspected-Neisseria gonorrhoeae%拟诊为淋病患者中泌尿生殖道沙眼衣原体基因分型及序列分析

    Institute of Scientific and Technical Information of China (English)

    张娟娟; 卢次勇; 冯铁建; 赵广录; 张丽君; 王峰; 洪福昌; 蓝丽娜; 吴肖冰; 陶小华; 张春来

    2010-01-01

    目的 了解深圳市拟诊为淋病患者中泌尿生殖道沙眼衣原体的合并感染情况及其基因型分布和序列变异特点.方法 采集401例拟诊为淋病患者的泌尿生殖道分泌物样本,应用Roche Amplicor全自动核酸检测系统对样本进行淋球菌和沙眼衣原体双检,提取DNA,应用巢式聚合酶链反应(nested-PGR)扩增沙眼衣原体主要外膜蛋白基因(omp1)中的VS1~VS2片段,并对其进行序列测定,所获得的序列利用Mega4.0软件与标准参考株进行比对,分析确定其基因型及序列变异情况.结果 401例拟诊为淋病患者中淋球菌的感染率为82.3%(330/401),沙眼衣原体的感染率为24.2%(97/401),淋球菌和沙眼衣原体的合并感染率为21.7%(87/401).97份沙眼衣原体阳性样本中获得73份沙眼衣原体基因片段序列,共检出8个基因型,分别为E型(27.4%)、G/Ga型(23.3%)、D/Da型(16.4%)、F型(13.7%)、J型(11.0%)、H型(5.5%)、B和K型(各1.4%).序列分析发现3例(4.1%)菌株发生错义突变,分别为D/Da型、E型、G/Ga型;F型、H型、J型和K型序列虽多见碱基突变,但均为同义突变.结论淋病患者合并感染沙眼衣原体的比例较高,且泌尿生殖道沙眼衣原体的基因型以E、G/Ga、D/Da和F型为主.序列分析可以为泌尿生殖道沙眼衣原体的分子流行病学研究提供依据.%Objective To understand the prevalence rate of genital Chlamydia trachomatis among a population with suspected-Neisseria gonorrhoeae infection,the distribution of Chlamydia trachomatis genotypes,assess changes in omp1 sequences among patients with Neisseria gonorrhoeae and Chlamydia trachomatis coinfections.Methods Four hundred and one swabs were collected.Chlamydia trachomatis and Neisseria gonorrhoeae were detected by Roche Amplicor System.DNA were extracted from those samples and were amplified by nested PCR.PCR products were sequencing and analyzed by software Mega4.0.Results The prevalence of genital Chlamydia

  18. Comparison of Three Nucleic Acid Amplification Assays of Cerebrospinal Fluid for Diagnosis of Cytomegalovirus Encephalitis

    Science.gov (United States)

    Bestetti, Arabella; Pierotti, Chiara; Terreni, Mariarosa; Zappa, Alessandra; Vago, Luca; Lazzarin, Adriano; Cinque, Paola

    2001-01-01

    The diagnostic reliabilities of three cytomegalovirus (CMV) nucleic acid amplification assays of cerebrospinal fluid (CSF) were compared by using CSF samples from human immunodeficiency virus-infected patients with a postmortem histopathological diagnosis of CMV encephalitis (n = 15) or other central nervous system conditions (n = 16). By using a nested PCR assay, the quantitative COBAS AMPLICOR CMV MONITOR PCR, and the NucliSens CMV pp67 nucleic acid sequence-based amplification assay, sensitivities were 93.3, 86.6, and 93.3%, respectively, and specificities were 93.7, 93.7, and 87.5%, respectively. The COBAS AMPLICOR assay revealed significantly higher CMV DNA levels in patients with diffuse ventriculoencephalitis than in patients with focal periventricular lesions. PMID:11230445

  19. Is real-time PCR better than conventional PCR for Mycobacterium tuberculosis complex detection in clinical samples?

    Science.gov (United States)

    Tortoli, Enrico; Urbano, Pasquale; Marcelli, Fiorella; Simonetti, Tullia M; Cirillo, Daniela M

    2012-08-01

    Cobas Amplicor MTB and later Cobas TaqMan MTB were used to test a very large series of consecutive specimens received for tuberculosis diagnosis. Performance parameters were estimated and compared overall and for separate specimen categories. Both systems showed excellent specificity, and that of TaqMan was the higher. The sensitivities were similar but satisfactory only with respiratory specimens and smear-positive samples.

  20. Cholesterol biosynthesis inhibitor RO 48-8071 suppresses growth of hormone-dependent and castration-resistant prostate cancer cells

    OpenAIRE

    Liang Y; Mafuvadze B; Aebi JD; Hyder SM

    2016-01-01

    Yayun Liang,1 Benford Mafuvadze,1 Johannes D Aebi,2 Salman M Hyder1 1Dalton Cardiovascular Research Center and Department of Biomedical Sciences, University of Missouri-Columbia, Columbia, MO, USA; 2Medicinal Chemistry, Roche Pharma Research and Early Development (pRED), Roche Innovation Center Basel, F Hoffmann-La Roche Ltd., Basel, Switzerland Abstract: Standard treatment for primary prostate cancer includes systemic exposure to chemotherapeutic drugs that target androgen receptor or anti...

  1. 76 FR 40735 - Joint Meeting of the Advisory Committee for Reproductive Health Drugs and the Drug Safety and...

    Science.gov (United States)

    2011-07-11

    ...) tablets, Warner Chilcott, LLC; BONIVA (ibandronate sodium) tablets and injection, Roche Therapeutics, Inc.; RECLAST (zoledronic acid) injection, Novartis Pharmaceuticals Corp.; and the generic equivalents for these...

  2. Streptococcus pneumoniae

    African Journals Online (AJOL)

    University Hospitals Case Medical Center, Cleveland, Ohio, USA. Michael R Iacobs, MB .... concentrations on organism growth dynamics. Antimicrobials ..... Roche Pharmaceuticals, TAP Pharmaceuticals, Warner-Lambert. Pharmaceuticals ...

  3. 75 FR 39024 - Determination That ACCUTANE (Isotretinoin) Capsules, 10 Milligrams, 20 Milligrams, and 40...

    Science.gov (United States)

    2010-07-07

    ... HUMAN SERVICES> Food and Drug Administration Determination That ACCUTANE (Isotretinoin) Capsules, 10... Administration (FDA) is announcing its determination that ACCUTANE (isotretinoin) Capsules, 10 milligrams (mg...) Capsules, 10 mg, 20 mg, and 40 mg, are the subject of NDA 18-662, held by Hoffman-La Roche, Inc. (Roche...

  4. Complex geometry and real geometry

    Institute of Scientific and Technical Information of China (English)

    YU; Yanlin; ZHU; Lin; FENG; Xiuhong

    2005-01-01

    There is a well-known way to generalize the Riemann-Roch operator for Kahler manifold to that for Hermitian manifold. In this paper we show a slightly different way to get a generalized Riemann-Roch operator, which is just the Dirac operator. The difference between the two operators is that the latter one enables the so-called Pythagoras equalities.

  5. Effects of Sarin on the Operant Behavior of Guinea Pigs

    Science.gov (United States)

    2005-07-19

    chemistry analyzer (Roche Diagnostics, Nutley, NJ). After 10 left lever presses, the schedule converted to a fixed- The analytical procedure was based... chemistry analyzer (Roche Diagnostics, Nutley, NJ). After 10 left lever presses, the schedule converted to a fixed- The analytical procedure was based on

  6. Insulin and Breast Cancer Risk

    Science.gov (United States)

    2002-06-01

    of three standard samples. Serum glucose was determined on a Cobas Mira automated chemistry analyzer (Roche Diagnostic Systems, Indianapolis, IL). The...was determined on a Cobas Mira automated chemistry analyzer (Roche Diagnostic Systems, Indianapolis, IL). The intrabatch coefficient of variation

  7. ELi eesistujamaa Iirimaa ei tee Moskvale järeleandmisi / Erkki Bahovski

    Index Scriptorium Estoniae

    Bahovski, Erkki, 1970-

    2004-01-01

    Iiri euroministri Dick Roche'i sõnul laieneb EL-i partnerlus- ja koostööleping Venemaaga kõigile uutele liikmesriikidele ning on oluline jõuda EL-i põhiseadusliku leppe osas üksmeelele. Vt. samas: Dick Roche'ile antakse Maarjamaa Risti I klass

  8. Discovery of metal line emission from the Red star in IP Peg during outburst maximum

    CERN Document Server

    Harlaftis, E T

    1999-01-01

    Observations of the eclipsing dwarf nova IP Peg during outburst reveal metal lines in emission, such as Mg II 4481 A. Analysis using Doppler tomography locates emission of helium and metal lines on the inner Roche lobe of the secondary star. Such multi-line Roche-lobe imaging presents a new tool in mapping the red star's ionization structure.

  9. Before You Search that Locker.

    Science.gov (United States)

    Dowling-Sendor, Benjamin

    1998-01-01

    In DesRoches v Caprio, federal district court ruled in favor of Jim DesRoches who had decided not to consent to a search of his backpack for a pair of allegedly stolen sneakers. Judge Robert G. Doumar decided the need to find the stolen sneakers did not outweigh the students' privacy interest and offered guidelines about school searches for stolen…

  10. The Smart/Empire Tipster IR System

    Science.gov (United States)

    1998-10-01

    State Transducer for Extracting Information from Natural-Language Text. In E. Roche andY. Schabes , editor, Finite-State Language Processing, pages 383...Fran- cisco, CA, 1997. Morgan Kaufmann. [ 16] Roche, E. and Schabes , Y., editor. Finite State De- vices for Natural Language Processing. MIT Press

  11. Integrative Modeling of Caprock Integrity in the Context of CO2 Storage: Evolution of Transport and Geochemical Properties and Impact on Performance and Safety Assessment Modélisation intégrée de l’intégrité des roches de couverture dans le contexte du stockage du CO2 : évolution des propriétés de transport et impact sur les performances et la sûreté du stockage

    Directory of Open Access Journals (Sweden)

    Bildstein O.

    2010-06-01

    Full Text Available The objective of the “Géocarbone-Intégrité” project (2005-2008 was to develop a methodology to assess the integrity of the caprock involved in the geological storage of CO2. A specific work package of the project (WP5 was dedicated to the integration of (1 the phenomenology describing the evolution of the storage system with a focus on the mechanisms occurring in the caprock and at the interface with the caprock, and (2 the data obtained from the investigation of petrographical, geomechanical, and geochemical properties, before and after reaction with CO2-rich solutions, performed in the other work packages (WP1 to WP4. This knowledge was introduced in numerical models and specific safety scenarios were defined in order to assess the performance of the CO2 storage system. The results of the modeling show that the injection of CO2 can potentially have a significant effect on the caprock by changing the porosity due to the dissolution and precipitation of minerals, but that the impact is limited to a zone from several decimeters to several meters of the caprock close to the interface with the reservoir depending on whether the supercritical carbon dioxide (SC-CO2 plume enters into the caprock and if fractures are present at this location. The methodology used in this project can be applied to a pilot site for the injection of CO2 in the Paris Basin. A key aspect of the safety of such a facility will be to look at the coupling of geochemical alteration and the evolution of geomechanical properties in the short and medium terms (several hundreds of years. The challenge for the future will be to structure and apply the safety assessment methodology with an operational finality, in order to support the robustness of the transition step to CGS projects at the industrial scale. Le Volet 5 du projet « Géocarbone-Intégrité » visait à intégrer l’ensemble des mécanismes étudiés dans les quatre premiers volets du projet pour une évaluation de performance des couvertures et une étude de sûreté afin de s’assurer de leur préservation et de leur intégrité sur le long terme (de l’ordre du millénaire. L’objectif est, d’une part, d’aboutir à la construction d’un modèle phénoménologique multi-échelle global, puis à un modèle numérique décrivant le confinement du CO2 par les couvertures, et, d’autre part, de déterminer les performances du confinement en identifiant les processus clés et les paramètres les plus influents. Une première partie du programme a consisté en une intégration spatiale de l’ensemble des données phénoménologiques et structurales disponibles à la suite des travaux réalisés dans les différents volets (WP1 à WP4 et à la définition des scénarios types d’évolution du site de stockage (niveaux réservoirs et encaissants. Ce travail a permis de définir les cas tests à prendre en compte et de réaliser les calculs de performance par rapport aux scénarios d’injection et par rapport aux hétérogénéités majeures identifiées dans les niveaux de confinement (notamment les fractures. Les résultats montrent que l’injection de CO2 peut avoir un effet significatif, en altérant la porosité par dissolution et précipitation de minéraux, mais que l’impact est limité dans l’espace, de quelques décimètres à quelques mètres de l’interface réservoir-couverture, selon que la bulle de CO2 supercritique pénètre ou non dans la couverture et selon la présence ou l’absence de fractures. La prise en compte des résultats issus de l’analyse de sensibilité et l’analyse des incertitudes permettra de conduire des calculs de sûreté plus précis. Appliqués au futur site d’injection, ces calculs permettront d’évaluer la pérennité des propriétés de confinement des couvertures et de valider la qualité de confinement du site de stockage de CO2. Il conviendra notamment d’évaluer l’impact du couplage entre les phénomènes géochimiques et géomécaniques sur le court et moyen terme (de l’ordre de la centaine d’années. Le défi pour l’avenir est de structurer et d’appliquer la méthodologie de l’analyse de sûreté, en mettant en avant la finalité opérationnelle, de manière à assurer la robustesse de la transition vers les projets de CGS à l’échelle industrielle.

  12. Integrative Modeling of cap-rock Integrity in the Context of CO{sub 2} Storage: Evolution of Transport and Geochemical Properties and Impact on Performance and Safety Assessment; Modelisation integree de l'integrite des roches de couverture dans le contexte du stockage du CO{sub 2}: evolution des proprietes de transport et impact sur les performances et la surete du stockage

    Energy Technology Data Exchange (ETDEWEB)

    Bildstein, O.; Credoz, A.; Jullien, M. [CEA Cadarache, DEN, DTN, 13 - Saint-Paul-lez-Durance (France); Kervevan, C.; Audigane, P.; Jacquemet, N. [BRGM, Service Eau, 45 - Orleans (France); Lagneau, V. [Institut de Geosciences, Ecole des Mines de Paris, ARMINES, 77 - Fontainebleau (France); Delaplace, P.; Perfetti, E. [Institut francais du petrole, IFP, Direction Ingenierie de Reservoir, 92 - Rueil-Malmaison (France)

    2010-05-15

    The objective of the 'Geocarbone-INTEGRITE' project (2005-2008) was to develop a methodology to assess the integrity of the cap-rock involved in the geological storage of CO{sub 2}. A specific work package of the project (WP5) was dedicated to the integration of (1) the phenomenology describing the evolution of the storage system with a focus on the mechanisms occurring in the cap-rock and at the interface with the cap-rock, and (2) the data obtained from the investigation of petrographical, geomechanical, and geochemical properties, before and after reaction with CO{sub 2}-rich solutions, performed in the other work packages (WP1 to WP4). This knowledge was introduced in numerical models and specific safety scenarios were defined in order to assess the performance of the CO{sub 2} storage system. The results of the modeling show that the injection of CO{sub 2} can potentially have a significant effect on the cap-rock by changing the porosity due to the dissolution and precipitation of minerals, but that the impact is limited to a zone from several decimeters to several meters of the cap-rock close to the interface with the reservoir depending on whether the supercritical carbon dioxide (SC-CO{sub 2}) plume enters into the cap-rock and if fractures are present at this location. The methodology used in this project can be applied to a pilot site for the injection of CO{sub 2} in the Paris Basin. A key aspect of the safety of such a facility will be to look at the coupling of geochemical alteration and the evolution of geomechanical properties in the short and medium terms (several hundreds of years). The challenge for the future will be to structure and apply the safety assessment methodology with an operational finality, in order to support the robustness of the transition step to CGS projects at the industrial scale. (authors)

  13. [Genetic characterization of viruses from the antigenic complex Tyuleniy (Flaviviridae, Flavivirus): Tyuleniy virus (TYUV) (ID GenBank KF815939) isolated from ectoparasites of colonial seabirds--Ixodes (Ceratixodes) uriae White, 1852, ticks collected in the high latitudes of Northern Eurasia--and Kama virus (KAMV) isolated from the Ixodes lividus Roch, 1844, collected in the digging colonies of the middle part of Russian plane].

    Science.gov (United States)

    L'vov, D K; Al'khovskiĭ, S V; Shchelkanov, M Iu; Shchetinin, A M; Deriabin, P G; Samokhvalov, E I; Gitel'man, A K; Botikov, A G

    2014-01-01

    Genetic research into the Tyuleniy virus (TYUV) (ID GenBank KF815939) isolated in high latitudes from the Ixodes uriae White, 1852, ticks collected in the nesting colonies of the Alcidae (Leach, 1820) birds and Kama virus (KAMV) (ID GenBank KF815940) isolated from the I. lividus ticks collected in the nesting bird colonies in the middle part of the Russian Plane was carried out. Full-genome comparative analysis revealed 70% homology between KAMV and TYUV on the nucleotide level and 74% on the amino acid level. Thus, KAMV is a new member of the TYUV complex belonging to the seabird tick-borne virus group (STBVG) of Flavivirus (Flaviviridae). KAMV is a separate virus and forms separate phylogenetic line together with the TYUV, Meaban virus (MEAV), and Saumarez Reef virus (SREV).

  14. 阿德福韦治疗对慢性乙型肝炎患者Th细胞相关细胞因子水平及HBVDNA的影响%The effect of adefovir dipivoxil therapy on T helper cell cytokines and HBV DNA loads in patients with hepatitis B

    Institute of Scientific and Technical Information of China (English)

    马萍; 宋诗铎; 王磊

    2011-01-01

    Objective To explore the influence of adefovir dipivoxil (ADV) therapy on the cellular immunity by observing the levels of interferon-γ(IFN-γ), interleukin-4 (IL-4) and their relationship with HBV DNA loads in patients with HBeAg-positive chronic hepatitis B at different time before and after treatment.Methods Sera of 30 patients before ADV therapy and 16 weeks ,52 weeks and 132 weeks after ADV therapy respectively were collected in this study.There were 14 complete response cases(group A), 16 incomplete response cases(group B).Sera of 10 healthy people were chosen as control group(group C).Levels of IFN-γ and IL-4 were detected with enzyme-linked immunosorbent assay; HBV DNA loads were detected by ROCHE COBAS AMPLIC)R HBV MONITOR, lower limit was 103 copy/mL.Results The average IFN-γ level in group A was significantly higher than that of group B (P<0.05)and C(P<0.05), there was no significant difference between group B and C(P>0.05);The level of IL-4 of group A decreased after treatment while group B didn't.HBV DNA loads of all groups had no significant correlation with IFN-γ and IL-4 levels before treatment, but dropped obviously at 16th week after treatment; and the increased level of IFN-γ in group A was significantly higher than that of group B(P<0.05); IL-4 levels in group A decreased gradually, but didn't decreased obviously in group B.Conclusion Cellular immune response of patients with hepatitis B was resumed to some extent after ADV treatment.The resumption level was positively related with the decreased level of HBV DNA load.%目的 观察乙型肝炎e抗原(HBeAg)阳性慢性乙型肝炎患者阿德福韦治疗前后不同时相点血清干扰素(IFN)-γ和白细胞介素(IL)-4的水平,以及其与乙型肝炎病毒(HBV)DNA定量的关系,以探讨阿德福韦治疗对机体免疫状态的影响.方法 采集30例阿德福韦治疗前及治疗16周、52周和132周患者的血清,其中完全应答组14例,部分应答组16

  15. Detección temprana y altamente sensible de citomegalovirus en muestras de plasma humano VIH-positivas

    OpenAIRE

    2009-01-01

    La detección temprana de citomegalovirus humano puede evitar graves consecuencias en la salud de pacientes inmunocomprometidos; por ello, es importante el empleo de métodos de detección sensibles y precisos. En el presente trabajo comparamos la sensibilidad y la especificidad de detección de tres métodos: 1) COBAS AMPLICOR CMV MONITOR¿ Test (CACM), método comercial validado y semiautomatizado que utiliza la reacción en cadena de la polimerasa (PCR) para detectar la expresión del gen temprano ...

  16. Tere tulemast tagasi, uue põlvkonna utopistid! / Veronika Valk

    Index Scriptorium Estoniae

    Valk, Veronika, 1976-

    2011-01-01

    Francois Roche ja Eva Castro tulevikuarhitektuuri käsitlevatest ettekannetest Tallinna arhitektuuribiennaali raames toimunud sümpoosionil. Maketinäitus "Viini eksiilid. Helisev arhitektuur" Heliose kinos. Eksponeeritakse Viini Die Angewandte arhitektuurikoolis (juht Hani Rashid) õppivate eestlaste loomingut

  17. Vanemuine otsib teed head teatrit hindava vaatajani / Sven Karja ; interv. Margot Visnap

    Index Scriptorium Estoniae

    Karja, Sven, 1968-

    2008-01-01

    Vanemuise eesseisvast hooajast. 27. sept. Tartu Sadamateatris esietendunud Donald Margulies' draamast "Kogutud teosed", lavastaja Eva Klemets; novembris esietendusvast Billy Roche'i "Vaene loom vihma käes", lavastaja Liisa Smith ja teistest uuslavastustest lühidalt

  18. MS Disease-Modifying Medications

    Science.gov (United States)

    ... every 6 months Genentech (a member of the Roche Group) (first dose: 300 mg IV on day ... MS | National MS Society 26 Each of the pharmaceutical companies offers a program designed to help people ...

  19. 40 CFR 52.1570 - Identification of plan.

    Science.gov (United States)

    2010-07-01

    ... combustion turbines, Morris County, NJ COAD approval dated March 31, 1995. (10) Hoffmann-La Roche's combined... COAD approval dated May 4, 1995. (15) Sandoz Pharmaceuticals Corporation's trash fired boiler, Morris...

  20. Diversity analysis of the immunoglobulin M heavy chain gene in Nile ...

    African Journals Online (AJOL)

    nu tom

    2015-07-22

    Jul 22, 2015 ... Full Length Research Paper. Diversity analysis of ..... Labeling and Detection Starter Kit I (Roche, Germany) according to the instruction ...... Mage RG, Bernstein KE, McCartney-Francis N, Alexander CB, Young-. Cooper GO ...

  1. RON

    African Journals Online (AJOL)

    owner

    2011-03-04

    Mar 4, 2011 ... Full Length Research Paper. Human immunodeficiency virus .... HIV-1 Monitor, Roche Diagnostics, Indianapolis, IN, USA) according ..... 161: 4950-4959. Correll PH, Iwama A, Tondat S, Mayrhofer G, Suda T, Bernstein A.

  2. (PKU) in Sohag University Hospital-Upper Egypt

    African Journals Online (AJOL)

    Abdelrahim A. Sadek

    2013-05-29

    May 29, 2013 ... nism (excessively fair hair and skin), and a ''musty odor'' to the baby's ... neurological examinations), and developmental assessment were done. .... chological damage occurs even in treated PKU as reported by. DeRoche ...

  3. 75 FR 34178 - Investigations Regarding Certifications of Eligibility To Apply for Worker Adjustment Assistance

    Science.gov (United States)

    2010-06-16

    ..., Inc. (State/ One-Stop). 74142 World Color (Workers)... Schaumburg, IL..... 05/25/10 05/21/10. 74143 Providence Watch Cranston, RI....... 05/25/10 05/13/10. Hospital (Workers). 74144 Hoffmann La Roche...

  4. Sequence Read Archive (SRA)

    Data.gov (United States)

    U.S. Department of Health & Human Services — The Sequence Read Archive (SRA) stores raw sequencing data from the next generation of sequencing platforms including Roche 454 GS System®, Illumina Genome...

  5. Immune-Focused Drug Shows Promise Against Lung Cancer

    Science.gov (United States)

    ... chemotherapy group. The study, published Dec. 12 in The Lancet , was funded by F. Hoffmann-La Roche Ltd. ... Northwell Health Cancer Institute, Lake Success, N.Y.; The Lancet , news release, Dec. 12, 2016 HealthDay Copyright (c) ...

  6. 136 ORIGINAL ARTICLE

    African Journals Online (AJOL)

    Dr Oboro VO

    2001, Sagamu, and 3Department of Microbial Genetics, National Institute of Medical Research,Yaba, ... Plasmid isolation was carried out by the alkaline lysis method of Birnboim and Dolly. .... 20ul of DNA molecular Weight Marker( Roche.

  7. 77 FR 42713 - Notice of Intent to Grant an Exclusive License; PadJack, Inc.

    Science.gov (United States)

    2012-07-20

    ... Technology Transfer Program, 9800 Savage Road, Suite 6541, Fort George G. Meade, MD 20755-6541. FOR FURTHER INFORMATION CONTACT: Marian T. Roche, Director, Technology Transfer Program, 9800 Savage Road, Suite...

  8. the role of industry in micronutrient intervention programmes

    African Journals Online (AJOL)

    The global control of micronutrient deficiencies is a realistic goal, notwithstanding the ... Roche Products (Pty) Ltd, Chloorkop, Gauteng. ·Ronnie Pankhurst, BSc ... Food quality should be regulated through legislation and effectively enforced.

  9. Tere tulemast tagasi, uue põlvkonna utopistid! / Veronika Valk

    Index Scriptorium Estoniae

    Valk, Veronika, 1976-

    2011-01-01

    Francois Roche ja Eva Castro tulevikuarhitektuuri käsitlevatest ettekannetest Tallinna arhitektuuribiennaali raames toimunud sümpoosionil. Maketinäitus "Viini eksiilid. Helisev arhitektuur" Heliose kinos. Eksponeeritakse Viini Die Angewandte arhitektuurikoolis (juht Hani Rashid) õppivate eestlaste loomingut

  10. Book Reviews

    Directory of Open Access Journals (Sweden)

    Bart Bechtel

    2008-01-01

    Full Text Available Fair Play: The Moral Dilemmas of Spying. By James M. Olson. The Corporate Spy: Industrial Espionage and Counterintelligence in the Multinational Enterprise with Case Studies (Abridged Version by Edward M. Roche.

  11. Vanemuine otsib teed head teatrit hindava vaatajani / Sven Karja ; interv. Margot Visnap

    Index Scriptorium Estoniae

    Karja, Sven, 1968-

    2008-01-01

    Vanemuise eesseisvast hooajast. 27. sept. Tartu Sadamateatris esietendunud Donald Margulies' draamast "Kogutud teosed", lavastaja Eva Klemets; novembris esietendusvast Billy Roche'i "Vaene loom vihma käes", lavastaja Liisa Smith ja teistest uuslavastustest lühidalt

  12. Tähelepanu keskmes on viiruslik hepatiit / Marika Kusnets

    Index Scriptorium Estoniae

    Kusnets, Marika

    2008-01-01

    Ülemaailmsel hepatiidipäeval 19. mail korraldasid Eesti Gastroenteroloogide Selts (EGS) ja Roche Eesti OÜ meediakanalite esindajatele ümarlaua, et aidata teadvustada C-hepatiidi ohtu, testimis- ja ravivõimalusi Eestis

  13. EPL-i ümarlaud : kõige olulisem on vähi varajane avastamine / Ille Grün-Ots

    Index Scriptorium Estoniae

    Grün-Ots, Ille, 1960-2016

    2007-01-01

    Ümarlaual osalesid TÜ kliinikumi hematoloogia-onkoloogiakliiniku professor Hele Everaus, ravimifirma Roche Eesti OÜ tegevjuht Kadri Mägi, ravifirma GlaxoSmithKline Eesti filiaali juhataja Akshay Mody ja PERH-i keemiaravispetsialist Helis Pokker

  14. (see photo 7503249)

    CERN Multimedia

    1975-01-01

    C.J. Zilverschoon, Peter Standley, Christian Roche, Jacques Blondel, Susan Neboux-Bland, Pierre Marti, Jurgen Knott; Roberto Cappi, Pierre Tetu, Charles Rufer, A. L'Aire, Patrick Lienard, Julienne de Winter

  15. Tähelepanu keskmes on viiruslik hepatiit / Marika Kusnets

    Index Scriptorium Estoniae

    Kusnets, Marika

    2008-01-01

    Ülemaailmsel hepatiidipäeval 19. mail korraldasid Eesti Gastroenteroloogide Selts (EGS) ja Roche Eesti OÜ meediakanalite esindajatele ümarlaua, et aidata teadvustada C-hepatiidi ohtu, testimis- ja ravivõimalusi Eestis

  16. EPL-i ümarlaud : kõige olulisem on vähi varajane avastamine / Ille Grün-Ots

    Index Scriptorium Estoniae

    Grün-Ots, Ille, 1960-2016

    2007-01-01

    Ümarlaual osalesid TÜ kliinikumi hematoloogia-onkoloogiakliiniku professor Hele Everaus, ravimifirma Roche Eesti OÜ tegevjuht Kadri Mägi, ravifirma GlaxoSmithKline Eesti filiaali juhataja Akshay Mody ja PERH-i keemiaravispetsialist Helis Pokker

  17. Response of low-strength phenol-acclimated activated sludge to ...

    African Journals Online (AJOL)

    2013-10-07

    Oct 7, 2013 ... (ii) investigate the degradation pathways and (iii) model the growth and biodegradation kinetics ... chemical and petrochemical, coke ovens, pharmaceuticals ..... MARROT B, BARRIOS-MERTINEZ A, MOULIN P and ROCHE N.

  18. Amplification of the active site of BnLIP3 gene of Brassica napus L ...

    African Journals Online (AJOL)

    Utilisateur

    important role in plant growth. In this study, we ... germination and increase concomitantly with the disap- pearance of ... production of pharmaceuticals, cosmetics, leathers, .... Roche Applied Science, Barcelona, Spain) and a 2.5 µl reverse.

  19. Induction of protective immune responses in mice by double DNA ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research October 2016; 15 (10): 2077-2083. ISSN: 1596-5996 (print); .... 1 unit pfu DNA polymerase (Roche Applied. Science, Penzberg ..... response may affect the control of cell growth. CONCLUSION.

  20. Failure to thrive and its relationship to serum vitamin A levels and diet

    African Journals Online (AJOL)

    cornerstones of the policy of promoting growth monitoring, oral rehydration ... plates; Behring Institute, Hoechst Pharmaceuticals, Harberg,. Germany). ..... Hamilt PVV, Orizel TA, Johnson CL, Reed RB, Roche AF, Moore WP. Physical growth: ...

  1. Effect of Scopoletin on Apoptosis and Cell Cycle Arrest in Human ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research April 2015; 14 (4): 611-617 ... Results: Scopoletin induced a dose-dependent growth inhibition in LNCaP prostate cancer cells. It induced G2/M .... (Roche Applied Science, Indianapolis, IN) [11].

  2. Capecitabine treatment of HCT-15 colon cancer cells induces ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research July 2017; 16 (7): 1529-1536 ... Conclusion: Capecitabine treatment causes inhibition of colon cancer growth via the mitochondrial pathway of ... Capecitabine was purchased from Roche.

  3. Antiproliferative and apoptotic effect of Astrodaucus orientalis (L ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-09-01

    Sep 1, 2009 ... 3Department of Medicinal Chemistry and Pharmaceutical Sciences Research Center, Faculty of .... and A. orientalis (L.) Drude which grow wild in different ... treated cells using TriPure isolation reagent (Roche, Germany).

  4. N

    African Journals Online (AJOL)

    Department of Medical Biosciences, University of the Western Cape, Private Bag X17,. Bellville, 7535, South .... (Dormicum; Roche Products (Pty) Ltd, South Africa, or Diprovan ..... The specific sequential growth medium used, as previously ...

  5. α-Mangostin suppresses 12-o-tetradecanoylphorbol-13- acetate ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research October 2016; 15 (10): 2063-2070. ISSN: 1596-5996 (print); .... 480 DNA SYBR Green I Master (Roche. Diagnostics GmbH ... inhibited growth of U2OS cells in a concentration dependent manner.

  6. Purification and characterization of β-glucosidase from newly ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-05-18

    May 18, 2009 ... study. The β-glucosidase can hydrolyze glycosides and increase free isoflavones in soy products .... using High Pure PCR Product Purification Kit (Roche, Germany). ..... for food and pharmaceuticals industries, in recent years,.

  7. Pharmacotherapy for post-traumatic stress disorder- a systematic ...

    African Journals Online (AJOL)

    j (n:J:J Medical Research Council Unit on Anxiety and Stress Disorders, Department of. Psychiatry ... treatments can be found in the increasing recognition that ...... Orion, Pfizer, Pharmacia, Roche, Servier, Solvay, Sumitomo, and. Wyeth.

  8. Clinical effect of combined ulinastatin and continuous renal ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research April 2017; 16 (4): 925-930. ISSN: 1596-5996 (print); ... levels of inflammation in SAKI patients through a mechanism involving improvement of antioxidant capacity .... Roche Co., Ltd., Germany.

  9. Baseline patient profiling and three-year outcome data after ...

    African Journals Online (AJOL)

    Improvement in the components of metabolic syndrome was demonstrated ... The morbidity data were separated into medical and surgical morbidity. Major medical .... 4.0–6.0% (Roche® Integra 400), with the patient not requiring medication.

  10. Preparation and antidiabetic activity of polysaccharide from ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-02-18

    Feb 18, 2009 ... physiological and pharmaceutical activities. The purpose ... and strips were purchased from Roche Diagnostic Co. (USA). Reagents for total .... increase of the ratio of solvent to raw material from 20 to. 40 in the extraction ...

  11. Anti-diabetic activity-guided screening of aqueous-ethanol Moringa ...

    African Journals Online (AJOL)

    1School of Pharmaceutical Sciences, Universiti Sains Malaysia, Pulau Pinang, Malaysia, 2Faculty of Pharmacy, ... increasing among Malaysians, reaching 23.8 % ... (Roche,. ACCU-CHEK. Performa no. 55404068967). Anti-diabetic studies.

  12. Virologic responses and tolerance of peginterferon alfa plus ribavirin ...

    African Journals Online (AJOL)

    Conclusions:Increasing age negatively affected the efficacy of peginterferon and ribavirin therapy in the treatment ... peginterferon alfa‑2a (Pegasys, Hoffmann‑La Roche, Shanghai, ... 40 mg of leucogen tablets (Jiangsu Jibeier Pharmaceutical.

  13. Optimization and Formulation of Orodispersible Tablets of Meloxicam

    African Journals Online (AJOL)

    Erah

    Tropical Journal of Pharmaceutical Research, April 2009; 8 (2): 153-159. © Pharmacotherapy Group, .... was measured using a. ROCHE friabilator (USP) at 25 rpm for 4 min. .... properties, these attributes improve the binding of the tablets and ...

  14. The immunotoxicity of Dicerothamnus rhinocerotis and Galenia ...

    African Journals Online (AJOL)

    STORAGESEVER

    2009-08-18

    Aug 18, 2009 ... Department of Medical Bioscience, The University of the Western Cape, Private ... Due to increasing awareness there is great pressure to reduce the use of .... purchased from Roche (South Africa), Merck (Germany) or Sigma.

  15. Rutin has anti-asthmatic effects in an ovalbumin-induced asthmatic ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research June 2017; 16 (6): 1337-1347 ... Conclusion: Rutin effectively suppresses OVA-induced asthma and improves airway function by suppressing ..... Djukanovic R, Roche WR, Wilson JW, Beasley CR,.

  16. Punctal Occlusion with Prolene Suture Material in the Patients with ...

    African Journals Online (AJOL)

    2017-07-26

    Jul 26, 2017 ... MGM Medical College and Hospital, Kamothe, Navi Mumbai, India ... Results: Punctal occlusion has been shown to improve the objective and subjective ..... Schein OD, Munoz B, Tielsch JM, Bandeen-Roche K, West S.

  17. Preparation and Characterization of Sustained Release Matrix ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research October 2015; 14(10): 1749-1754 ... prolonged drug release and improvement in motor activity after spinal injuries. Methods: Matrix .... The friability test was performed using a Roche friabilator ...

  18. A plant defensin gene from Orychophragmus violaceus can improve ...

    African Journals Online (AJOL)

    PRECIOUS

    2009-11-16

    Nov 16, 2009 ... the sequence comparison was conducted through database search using BLAST program .... Light-Cycler Software Ver.3.5 (Roche Diagnostics) and all quantifications were ..... The genetic engineer- ing can target to specific ...

  19. Presidential Green Chemistry Challenge: 2000 Greener Synthetic Pathways Award

    Science.gov (United States)

    Presidential Green Chemistry Challenge 2000 award winner, Roche Colorado, developed a greener synthesis for gancyclovir (Cytovene, a potent antiviral drug) that uses a second-generation Guanine Triester (GTE) process.

  20. MODULAR ANALYTICS: A New Approach to Automation in the Clinical Laboratory

    OpenAIRE

    Horowitz, Gary L.; Zaman, Zahur; Blanckaert, Norbert J. C.; Chan, Daniel W.; Dubois, Jeffrey A.; Golaz, Olivier; Mensi, Noury; Keller, Franz; Stolz, Herbert; Klingler, Karl; Marocchi, Alessandro; Prencipe, Lorenzo; McLawhon, Ronald W.; Nilsen, Olaug L.; Oellerich, Michael

    2005-01-01

    MODULAR ANALYTICS (Roche Diagnostics) (MODULAR ANALYTICS, Elecsys and Cobas Integra are trademarks of a member of the Roche Group) represents a new approach to automation for the clinical chemistry laboratory. It consists of a control unit, a core unit with a bidirectional multitrack rack transportation system, and three distinct kinds of analytical modules: an ISE module, a P800 module (44 photometric tests, throughput of up to 800 tests/h), and a D2400 module (16 photometric tests, throughp...

  1. Impact of a Novel, Anti-microbial Dressing on In Vivo, Pseudomonas aeruginosa Wound Biofilm: Quantitative Comparative Analysis using a Rabbit Ear Model

    Science.gov (United States)

    2014-12-01

    edetate, as it is available in the United States, is a pharmaceutical grade excipient that is thought to enhance the activity of ionic silver by...measurement. To recover bacteria, biofilm-infected wound samples were placed in tubes prefilled with homog- enizer beads ( Roche Diagnostics, Indianapolis, IN...One mL of PBS was added to the tube and was homogenized for 90 seconds at 2991 g in a MagNA Lyser homogenizer ( Roche Diagnostics), followed by

  2. De geologie van den Cimone di Margno en den Monte di Muggio

    NARCIS (Netherlands)

    Buning, W.L.

    1931-01-01

    Le terrain étudié (fig. 1) est formé de roches métamorphiques pour plus de la moitié; le reste est formé de sédiments variant du Permien au Trias Inférieur, et de roches appartenant à la culmination éruptivocristalline du Cimone di Margno. Le relief du paysage présente en général des pentes douces.

  3. Febrile Neutropenia Risk Assessment and Granulocyte-Colony Stimulating Factor Support in Patients with Diffuse Large B Cell Lymphoma Receiving R-CHOP Regimens

    DEFF Research Database (Denmark)

    Salar, Antonio; Haioun, Corinne; Rossi, Francesca Gaia

    2009-01-01

    at lower risk), and only around two-thirds of patients received optimal chemotherapy RDI. Our data suggest that improvements in neutropenia management are required. More consistent use of G-CSF primary prophylaxis may further reduce FN and assist in optimal chemotherapy delivery. Sponsored by Amgen...... Disclosures: Salar: Amgen: Honoraria. Haioun: Roche: Research Funding; Amgen: Other, Research Funding; Celgene: Other, Research Funding; Mundipharma: Research Funding. Pettengell: Amgen: Honoraria, Speakers Bureau; Roche: Honoraria, Speakers Bureau; Bayer: Honoraria, Speakers Bureau. Jaeger: Amgen: Research...

  4. Treatment and Prevention of Breast Cancer Using Multifunctional Inhibitors of Cholesterol Biosynthesis

    Science.gov (United States)

    2014-06-01

    Aldrich; RO analogs were provided by Roche Pharmaceuticals (Basel, Swit- zerland) and were synthesized as previously described [22, 30]. MG-132 was from...prognosis, treatment and /or rehabilitation of a disease, injury or condition, or to improve the quality of life. This list may include development of...Aebi Small Molecule Research, Medicinal Chemistry, Pharma Research & Early Development (pRED), F. Hoffmann-La Roche AG, Grenzacherstrasse 124, 4070

  5. The Darleen Druyun Debacle: Procurement, Power, and Corruption

    Science.gov (United States)

    2005-08-01

    196 The resignation of Boeing’s CEO, Phil Condit, was also, at least partially, due to the events surrounding Ms. Druyun’s hiring. 197 Press...Ralph Crosby .268 The “blame the system/institution” set may point to an e-mail exchange between Secretary Roche and Ms. Druyun that occurred...268 Secretary Roche had worked with Crosby at Northrop Grumman. Id at 3. 66 not have been surprised at the slime…his day of reckoning will

  6. Tanker Recapitalization: Lessons From the Past

    Science.gov (United States)

    2010-04-01

    Jefferson Davis Highway, Suite 1204, Arlington VA 22202-4302. Respondents should be aware that notwithstanding any other provision of law , no person... Vago Muradian. ―Roche Seeks Speedy 767 Deal With Boeing to Renew Support Fleet at Low Cost,‖ Defense Daily International. [12 October, 2001...Senator John. Re: Tanker Recapitalization Program: Request for Proposals. Washington, DC: US Senate. 8 September 2006. Muradian, Vago . ―Roche

  7. The role of taxanes in triple-negative breast cancer: literature review [Corrigendum

    OpenAIRE

    Mustacchi G; De Laurentiis M

    2015-01-01

    Mustacchi G, De Laurentiis MMustacchi G, De Laurentiis M. Drug Des Devel Ther. 2015;9:4303–4318.On page 4315, Disclosure section, "This work was supported by an unconditional grant from Editree editors, Italy, and both authors received a fee. Giorgio Mustacchi receives honoraria from Roche, Celgene, and EISAI. Michelino De Laurentiis receives honoraria from Roche, Celgene, EISAI, Novartis, and AstraZeneca. The authors report no other conflicts of interest in this work.&...

  8. De geologie van den Cimone di Margno en den Monte di Muggio

    NARCIS (Netherlands)

    Buning, W.L.

    1931-01-01

    Le terrain étudié (fig. 1) est formé de roches métamorphiques pour plus de la moitié; le reste est formé de sédiments variant du Permien au Trias Inférieur, et de roches appartenant à la culmination éruptivocristalline du Cimone di Margno. Le relief du paysage présente en général des pentes douces.

  9. Dried blood spots for the diagnosis and quantitation of HIV-1: stability studies and evaluation of sensitivity and specificity for the diagnosis of infant HIV-1 infection in Thailand.

    Science.gov (United States)

    Leelawiwat, W; Young, N L; Chaowanachan, T; Ou, C Y; Culnane, M; Vanprapa, N; Waranawat, N; Wasinrapee, P; Mock, P A; Tappero, J; McNicholl, J M

    2009-02-01

    Molecular methods for HIV-1 infection using dried blood-spot (DBS) for HIV-1 CRF01_AE subtypes have not been fully optimized. In this study assays for HIV-1 diagnosis or quantitation were evaluated using infant DBS from Thailand. Paired DBS and whole blood samples from 56 HIV-1 CRF01_AE or B'-infected infants were tested for infant diagnosis using modified Amplicor DNA PCR and NucliSens RNA NASBA and an in-house real-time PCR assay. The Amplicor Monitor viral load (VL) assay, with modifications for DBS, was also evaluated. DBS VL were hematocrit corrected. Stability studies were done on DBS stored at -70 degrees C to 37 degrees C for up to 1 year. The DBS diagnostic assays were 96-100% sensitive and 100% specific for HIV-1 diagnosis. DBS HIV-1 VL were highly correlated with plasma VL when corrected using the actual or an assumed hematocrit factor (r(c)=0.88 or 0.93, respectively). HIV-1 DNA in DBS appeared to be more stable than RNA and could be detected after up to 9 months at most temperatures. DBS VL could be consistently determined when stored frozen. These results show that DBS can be used accurately instead of whole blood for the diagnosis of HIV-1 infection and VL quantitation, particularly if samples are appropriately stored.

  10. Comparison of molecular assays for detection and typing of human papillomavirus.

    Science.gov (United States)

    Koidl, Christoph; Bozic, Michael; Hadzisejdic, Ita; Grahovac, Maja; Grahovac, Blazenka; Kranewitter, Wolfgang; Marth, Egon; Kessler, Harald H

    2008-08-01

    The objective of the study was to compare the performance of 3 different extraction instruments in conjunction with 4 different amplification and detection kits for detection and typing of human papillomavirus (HPV) deoxyribonucleic acid (DNA). A total of 42 cervical swabs were investigated. HPV DNA was extracted on the 3 different instruments. Each of the extracts was then amplified, and HPV DNA amplification products were detected with 4 different kits. In 31 samples, HPV DNA was detected by both the Amplicor HPV test and the LINEAR ARRAY HPV genotyping test in conjunction with DNA extraction on the easyMAG instrument. In another 6 samples, only low-risk types were detected with the linear array HPV genotyping test. After extraction on the easyMAG instrument, 32 samples tested positive when the PapilloCheck with the HotStarTaq DNA polymerase was used. Together with extraction on the easyMAG instrument, the Amplicor HPV test, the linear array HPV genotyping test, and the new PapilloCheck with the HotStarTaq DNA polymerase provide comparable results allowing reliable and safe HPV diagnostics in the routine laboratory. Use of alternative assays may lead to an increase of invalid and divergent HPV typing results.

  11. Intramolecular Oxidative O-Demethylation of an Oxoferryl Porphyrin Complexed with a Per-O-methylated β-Cyclodextrin Dimer.

    Science.gov (United States)

    Kitagishi, Hiroaki; Kurosawa, Shun; Kano, Koji

    2016-11-22

    The intramolecular oxidation of ROCH3 to ROCH2 OH, where the latter compound spontaneously decomposed to ROH and HCHO, was observed during the reaction of the supramolecular complex (met-hemoCD3) with cumene hydroperoxide in aqueous solution. Met-hemoCD3 is composed of meso-tetrakis(4-sulfonatophenyl)porphinatoiron(III) (Fe(III) TPPS) and a per-O-methylated β-cyclodextrin dimer having an -OCH2 PyCH2 O- linker (Py=pyridine-3,5-diyl). The O=Fe(IV) TPPS complex was formed by the reaction of met-hemoCD3 with cumene hydroperoxide, and isolated by gel-filtration chromatography. Although the isolated O=Fe(IV) TPPS complex in the cyclodextrin cage was stable in aqueous solution at 25 °C, it was gradually converted to Fe(II) TPPS (t1/2 =7.6 h). This conversion was accompanied by oxidative O-demethylation of an OCH3 group in the cyclodextrin dimer. The results indicated that hydrogen abstraction by O=Fe(IV) TPPS from ROCH3 yields HO-Fe(III) TPPS and ROCH2(.) . This was followed by radical coupling to afford Fe(II) TPPS and ROCH2 OH. The hemiacetal (ROCH2 OH) immediately decomposed to ROH and HCHO. This study revealed the ability of oxoferryl porphyrin to induce two-electron oxidation.

  12. A clinical, epidemological, laboratorial, histological and ultrasonographical evaluation of anti-HCV EIA-2 positive blood donors Avaliação clínica, epidemiológica, laboratorial, histológica e ultrassonográfica de doadores de sangue anti-HCV EIA-2 positivos

    Directory of Open Access Journals (Sweden)

    Fernando L. GONÇALES JR

    2000-06-01

    RIBA-2 positive subjects, in 37.5% of the indeterminate RIBA-2 donors and in 9% of the negative RIBA-2 donors. Chronic hepatitis has also been observed in 50% of the histopathological exams of the anti-HCV EIA-2 reagent donors which were indeterminate RIBA-2. Among 18 blood donors with minimal changes histopathological exam 11 (61% were HCV-RNA positive. Our blood donors anti-HCV reagent generally had clinical, laboratorial and histopathological features observed in patients with chronic HCV hepatitis and a high proportion could be identified in interviews and medical evaluation realized in blood blanks. Generally, these HCV infected donors are identified and discharged only by the serological tests results.Entre 1992 e 1997 foram avaliados, ambulatorialmente, 790 doadores de sangue com teste anti-HCV EIA-2 fortemente reagente (relação entre a densidade ótica da amostra / "cut-off" > 3, que haviam sido detectados na triagem sorológica do banco de sangue. Todos eram negativos para doença de Chagas, sífilis, hepatite B (HBsAg e AIDS. Amostras de sangue foram coletadas, na primeira consulta ambulatorial, para a realização de hemograma, exames bioquímicos e novos testes sorológicos para a HVC (anti-HCV EIA-2. Em 226 doadores anti-HCV EIA-2 repetidamente reagentes, realizou-se o teste suplementar de "immunoblot" para a HVC (RIBA-2. Em 209 doadores, pesquisou-se a presença do RNA do VHC pelo teste do PCR, através de exame automatizado (HCV-AMPLICOR, ROCHE. A ultra-sonografia abdominal foi realizada em 366 doadores e a biópsia hepática em 269 concordantes. Notou-se que 95,6% eram EIA-2 repetidamente reagentes, 94% eram assintomáticos e que apenas 2% referiram icterícia pregressa. Em 47% detectou-se, pelo menos, um fator de risco para a transmissão do VHC, sendo o uso de drogas E.V. o principal deles (27,8%. A transfusão de sangue foi o segundo fator na transmissão da HVC (27,2%. Hepatomegalia foi encontrada em 54%. Esplenomegalia e sinais de hipertens

  13. Systematic Review of the Performance of HIV Viral Load Technologies on Plasma Samples

    Science.gov (United States)

    Sollis, Kimberly A.; Smit, Pieter W.; Fiscus, Susan; Ford, Nathan; Vitoria, Marco; Essajee, Shaffiq; Barnett, David; Cheng, Ben; Crowe, Suzanne M.; Denny, Thomas; Landay, Alan; Stevens, Wendy; Habiyambere, Vincent; Perrins, Jos; Peeling, Rosanna W.

    2014-01-01

    Background Viral load (VL) monitoring is the standard of care in developing country settings for detecting HIV treatment failure. Since 2010 the World Health Organization has recommended a phase-in approach to VL monitoring in resource-limited settings. We conducted a systematic review of the accuracy and precision of HIV VL technologies for treatment monitoring. Methods and Findings A search of Medline and Embase was conducted for studies evaluating the accuracy or reproducibility of commercially available HIV VL assays. 37 studies were included for review including evaluations of the Amplicor Monitor HIV-1 v1.5 (n = 25), Cobas TaqMan v2.0 (n = 11), Abbott RealTime HIV-1 (n = 23), Versant HIV-1 RNA bDNA 3.0 (n = 15), Versant HIV-1 RNA kPCR 1.0 (n = 2), ExaVir Load v3 (n = 2), and NucliSens EasyQ v2.0 (n = 1). All currently available HIV VL assays are of sufficient sensitivity to detect plasma virus levels at a lower detection limit of 1,000 copies/mL. Bias data comparing the Abbott RealTime HIV-1, TaqMan v2.0 to the Amplicor Monitor v1.5 showed a tendency of the Abbott RealTime HIV-1 to under-estimate results while the TaqMan v2.0 overestimated VL counts. Compared to the Amplicor Monitor v1.5, 2–26% and 9–70% of results from the Versant bDNA 3.0 and Abbott RealTime HIV-1 differed by greater than 0.5log10. The average intra and inter-assay variation of the Abbott RealTime HIV-1 were 2.95% (range 2.0–5.1%) and 5.44% (range 1.17–30.00%) across the range of VL counts (2log10–7log10). Conclusions This review found that all currently available HIV VL assays are of sufficient sensitivity to detect plasma VL of 1,000 copies/mL as a threshold to initiate investigations of treatment adherence or possible treatment failure. Sources of variability between VL assays include differences in technology platform, plasma input volume, and ability to detect HIV-1 subtypes. Monitoring of individual patients should be performed on the same

  14. Systematic review of the performance of HIV viral load technologies on plasma samples.

    Directory of Open Access Journals (Sweden)

    Kimberly A Sollis

    Full Text Available BACKGROUND: Viral load (VL monitoring is the standard of care in developing country settings for detecting HIV treatment failure. Since 2010 the World Health Organization has recommended a phase-in approach to VL monitoring in resource-limited settings. We conducted a systematic review of the accuracy and precision of HIV VL technologies for treatment monitoring. METHODS AND FINDINGS: A search of Medline and Embase was conducted for studies evaluating the accuracy or reproducibility of commercially available HIV VL assays. 37 studies were included for review including evaluations of the Amplicor Monitor HIV-1 v1.5 (n = 25, Cobas TaqMan v2.0 (n = 11, Abbott RealTime HIV-1 (n = 23, Versant HIV-1 RNA bDNA 3.0 (n = 15, Versant HIV-1 RNA kPCR 1.0 (n = 2, ExaVir Load v3 (n = 2, and NucliSens EasyQ v2.0 (n = 1. All currently available HIV VL assays are of sufficient sensitivity to detect plasma virus levels at a lower detection limit of 1,000 copies/mL. Bias data comparing the Abbott RealTime HIV-1, TaqMan v2.0 to the Amplicor Monitor v1.5 showed a tendency of the Abbott RealTime HIV-1 to under-estimate results while the TaqMan v2.0 overestimated VL counts. Compared to the Amplicor Monitor v1.5, 2-26% and 9-70% of results from the Versant bDNA 3.0 and Abbott RealTime HIV-1 differed by greater than 0.5log10. The average intra and inter-assay variation of the Abbott RealTime HIV-1 were 2.95% (range 2.0-5.1% and 5.44% (range 1.17-30.00% across the range of VL counts (2log10-7log10. CONCLUSIONS: This review found that all currently available HIV VL assays are of sufficient sensitivity to detect plasma VL of 1,000 copies/mL as a threshold to initiate investigations of treatment adherence or possible treatment failure. Sources of variability between VL assays include differences in technology platform, plasma input volume, and ability to detect HIV-1 subtypes. Monitoring of individual patients should be performed on the same

  15. Tidal disruption of satellites and formation of narrow rings

    CERN Document Server

    Leinhardt, Zoe M; Latter, Henrik N; Kokubo, Eiichiro

    2012-01-01

    In this paper we investigate the formation of narrow planetary rings such as those found around Uranus and Saturn through the tidal disruption of a weak, gravitationally bound satellite that migrates within its Roche limit. Using $N$-body simulations, we study the behaviour of rubble piles placed on circular orbits at different distances from a central planet. We consider both homogeneous satellites and differentiated bodies containing a denser core. We show that the Roche limit for a rubble pile is closer to the planet than for a fluid body of the same mean density. The Roche limit for a differentiated body is also closer to the planet than for a homogeneous satellite of the same mean density. Within its Roche limit, a homogeneous satellite totally disrupts and forms a narrow ring. The initial stages of the disruption are similar to the evolution of a viscous fluid ellipsoid, which can be computed semi-analytically. On the other hand, when a differentiated satellite is just within the Roche limit only the ma...

  16. Chemically Tunable Transport Phenomena of Functionalized Graphene

    Science.gov (United States)

    Leconte, Nicolas; Lherbier, Aurélien; Varchon, Francois; Charlier, Jean-Christophe; Palacios, Juan Jose; Soriano, David; Ordejon, Pablo; Roche, Stephan

    2012-02-01

    We present an ab initio multiscale study and quantum transport simulations using the Kubo formalism [1] of chemically modified graphene based materials, whose properties are tuned by changing the density and nature of grafted molecular units. Depending on the nature of the introduced molecular bonding different conduction mechanism are obtained, including transition from weak to strong Anderson localization [2,3], as well as spin-dependent phenomena [4] and magnetoresistive fingerprints [5]. [4pt] References: [1] H. Ishii, F. Triozon, N. Kobayashi, K. Hirose, and S. Roche, C. R. Physique 10, 283 (2009) [2] N. Leconte, J. Moser, P. Ordejon, H. Tao, A. Lherbier, A. Bachtold, F. Alsina, C.M. Sotomayor Torres, J.-C. Charlier, and S. Roche, ACS Nano 4, 7, 4033-4038 (2010) [3] N. Leconte, A. Lherbier, F. Varchon, P. Ordejon, S. Roche, and J.-C. Charlier (accepted in PRB) [4] N. Leconte, D. Soriano, S. Roche, P. Ordejon, J.-C. Charlier, and J.J. Palacios, ACS Nano 5, 5, 3987-3992 (2011) [5] D. Soriano, N. Leconte, P. Ordejon, J.-C. Charlier, J.J. Palacios, and S. Roche, Phys. Rev. Lett. 107, 016602 (2011)

  17. [Low rate of oropharyngeal human papillomavirus infection among women with cervical lesion. Preliminary results from the South-Eastern Hungarian population].

    Science.gov (United States)

    Vanya, Melinda; Jakó, Mária; Terhes, Gabriella; Szakács, László; Kaiser, László; Deák, Judit; Bártfai, György

    2016-01-10

    Although the natural history of cervical and oral human papillomavirus infection has been intensively investigated in the past years, the ability of this virus to infect oral and genital mucosae in the same individual and its potential to co-infect both cervical and oral mucosa are still unclear. The aim of the authors was to assess the presence of oropharyngeal human papillomavirus infection in women with cervical lesions in the South-Eastern Hungarian population. The total of 103 women have been included in the study between March 1, 2013 and January 1, 2015. Brushing was used to collect cells from the oropharyngeal mucosa. Human papillomavirus DNA was detected using polymerase chain reaction, and Amplicor line blot test was used for genotyping. Oropharyngeal human papillomavirus infection was detected in 2 cases (3%). The detected genotypes were 31, 40/61 and 73 in the oropharyngeal region. The results indicate that in women with cervical lesions oropharyngeal human papillomavirus infection rarely occurs.

  18. Tidal disruption of inviscid protoplanets

    Science.gov (United States)

    Boss, Alan P.; Cameron, A. G. W.; Benz, W.

    1991-01-01

    Roche showed that equilibrium is impossible for a small fluid body synchronously orbiting a primary within a critical radius now termed the Roche limit. Tidal disruption of orbitally unbound bodies is a potentially important process for planetary formation through collisional accumulation, because the area of the Roche limit is considerably larger then the physical cross section of a protoplanet. Several previous studies were made of dynamical tidal disruption and different models of disruption were proposed. Because of the limitation of these analytical models, we have used a smoothed particle hydrodynamics (SPH) code to model the tidal disruption process. The code is basically the same as the one used to model giant impacts; we simply choose impact parameters large enough to avoid collisions. The primary and secondary both have iron cores and silicate mantles, and are initially isothermal at a molten temperature. The conclusions based on the analytical and numerical models are summarized.

  19. Comparison of DNA extraction protocols for Mycobacterium Tuberculosis in diagnosis of tuberculous meningitis by real-time polymerase chain reaction

    Directory of Open Access Journals (Sweden)

    Rajeev Thakur

    2011-01-01

    Full Text Available Background: Several nucleic acid amplification techniques are available for detection of Mycobacterium tuberculosis (MTB in pulmonary and extrapulmonary samples, but insufficient data are available on the diagnostic utility of these techniques in tubercular meningitis where bacilli load is less. The success of final amplification and detection of nucleic acid depends on successful extraction of DNA from the organism. Aims: We performed this study to compare four methods of extraction of MTB DNA from cerebrospinal fluid (CSF samples so as to select one method of DNA extraction for amplification of nucleic acid from clinical samples. Materials and Methods: Four methods of extracting MTB DNA from CSF samples for testing by real-time polymerase chain reaction (PCR were compared: QIAGEN R protocol for DNA purification using QIAamp spin procedure (manual, AMPLICOR R respiratory specimen preparation kit, MagNA Pure R kit extraction, combined manual DNA extraction with automated extraction by MagNA Pure R . Real-time PCR was performed on COBAS TaqMan 48 Analyzer R with known positive and negative controls. Results: The detection limit for the combined manual and MagNA Pure R extraction protocol was found to be 100 copies of MTB DNA per reaction as against 1,000 copies of MTB DNA per reaction by the QIAGEN R , AMPLICOR R , and the MagNA Pure R extraction protocol. Conclusion: The real-time PCR assay employing the combination of manual extraction steps with MagNA Pure R extraction protocol for extraction of MTB DNA proved to be better than other extraction methods in analytical sensitivity, but could not detect less than 10 2 bacilli /ml.

  20. Viral blips during long-term treatment with standard or double dose lamivudine in HBe antigen negative chronic hepatitis B

    Institute of Scientific and Technical Information of China (English)

    2007-01-01

    AIM: To evaluate safety and effect on hepatitis B virus (HBV) suppression of a long-term treatment with lamivudine (LAM) at standard (100 mg/d) or double (200 mg/d) dose in chronic hepatitis B. METHODS: This was a case study with matched controls (1:3) in patients with chronic hepatitis B with anti-Hbe antibodies. RESULTS: Twelve patients received LAM 200 mg/d and 35 LAM 100 mg/d, for a median of 28 mo. A primary response (PR; I.e. Negative HBV-DNA with Amplicor assay) was achieved in 100% of LAM-200 patients and 83% of LAM-100 patients. A virological breakthrough occurred in 16.7 and 24.7%, respectively, of the PR-patients, with the appearance of typical LAM resistance mutations in all but one patient. Viremia blips (I.e. Transient HBV-DNA below 80 IU/Ml in patients who tested negative at Amplicor assay) were detected using a real time polymerase chain reaction (PCR) and occurred in seven out of nine patients with subsequent BT and in four out of 32 patients with end-of-study response (77.7% vs 12.5%; P = 0.001) at chi-square test). At the end of the study, 51.4% of LAM-100 patients and 83.3% of LAM-200 patients had remained stably HBV-DNA negative. Double-dose LAM was well tolerated. CONCLUSION: Long-term treatment of anti-Hbe positive chronic hepatitis B with double dose lamivudine causes a more profound and stable viral suppression as compared to conventional treatment.

  1. The future of discovery chemistry: quo vadis? Academic to industrial--the maturation of medicinal chemistry to chemical biology.

    Science.gov (United States)

    Hoffmann, Torsten; Bishop, Cheryl

    2010-04-01

    At Roche, we set out to think about the future role of medicinal chemistry in drug discovery in a project involving both Roche internal stakeholders and external experts in drug discovery chemistry. To derive a coherent strategy, selected scientists were asked to take extreme positions and to derive two orthogonal strategic options: chemistry as the traditional mainstream science and chemistry as the central entrepreneurial science. We believe today's role of medicinal chemistry in industry has remained too narrow. To provide the innovation that industry requires, medicinal chemistry must play its part and diversify at pace with our increasing understanding of chemical biology and network pharmacology. 2010 Elsevier Ltd. All rights reserved.

  2. Duas novas espécies de Ptychoderes Schoenherr (Coleoptera, Anthribidae, Anthribinae, Ptychoderini Two new species of Ptychoderes Schoenherr (Coleoptera, Anthribidae, Anthribinae, Ptychoderini

    Directory of Open Access Journals (Sweden)

    José Ricardo M. Mermudes

    2004-03-01

    Full Text Available Duas novas espécies de Ptychoderes Schoenherr, 1823 são descritas e ilustradas: Ptychoderes magnus sp. nov., da Bolívia e Brasil (localidade-tipo: Ouro Preto d'Oeste, Rondônia e P. jekeli sp. nov. do Brasil e Guiana Francesa (localidade-tipo: Roches de Kourou.The following new species of Ptychoderes Schoenherr, 1823 are described and illustrated (type-localities parenthetic: Ptychoderes magnus sp. nov., from Bolivia and Brazil (Rondônia: Ouro Preto d'Oeste and P. jekeli sp. nov., from Brazil and French Guiana (Roches de Kourou.

  3. Inhibition of Estrogen-Induced Growth of Breast Cancer by Targeting Mitochondria Oxidants

    Science.gov (United States)

    2010-04-01

    mM NaCl, 0.5% deoxycholate, 0.1% Nonidet P - 40 , 0.1% SDS, 50 mM Tris) containing protease and phosphatase inhibitors (Roche, CA). Equal amounts of...19 deoxycholate, 0.1% Nonidet P - 40 , 0.1% SDS, 50 mM Tris) containing protease and phosphatase inhibitors (Roche, CA). Whole cell lysates (WCL...modulators (MnSOD and catalase), were pre-treated with 40 μM ebselen or 1.0 mM NAC and then challenged with 100 pg/ml estrogensMCF-7 cells containing null

  4. 2007 Joint Service Power Expo: Power and Energy Independence for Warfighters

    Science.gov (United States)

    2007-04-26

    Indonesia + Malaysia (212+22) 23 72 85 117 Japan (127) 12 39 50 73 Western Europe (454) 26 66 88 161 Hansen Sea-level rise in Regions of...HEV) Many thanks to Mr. Bob Crow, Mr. Rob Roche (AMSAA) & Dr. Jim Cross, RDECOM. Component-level progress: •Power Electronics. •Batteries. •Motors...Vehicles (HEV) Many thanks to Mr. Bob Crow, Mr. Rob Roche (AMSAA) & Dr. Jim Cross, RDECOM. Component-level progress: •Power Electronics. •Batteries. •Motors

  5. The role of taxanes in triple-negative breast cancer: literature review [Corrigendum

    Directory of Open Access Journals (Sweden)

    Mustacchi G

    2015-10-01

    Full Text Available Mustacchi G, De Laurentiis MMustacchi G, De Laurentiis M. Drug Des Devel Ther. 2015;9:4303–4318.On page 4315, Disclosure section, "This work was supported by an unconditional grant from Editree editors, Italy, and both authors received a fee. Giorgio Mustacchi receives honoraria from Roche, Celgene, and EISAI. Michelino De Laurentiis receives honoraria from Roche, Celgene, EISAI, Novartis, and AstraZeneca. The authors report no other conflicts of interest in this work." should have read "The authors report no conflict of interest with this work".Read the original article

  6. [Leo Sternbach, an inventor of benzodiazepines].

    Science.gov (United States)

    Uchibayashi, Masao

    2007-01-01

    A biography of Leo Sternbach, an inventor of benzodiazepine tranquillizers, is presented. It consists of (1) a societal desire for lifestyle pills, (2) Leo's birth in 1908 and youth, (3) education, (4) in Vienna, (5) in Zurich, (6) at Hoffmann-La Roche, Basel, (7) to the New World, (8) at Roche, Nutley NJ, (9) invention of the new drugs, (10) revolution of people's lifestyle, and (11) reward, retirement and obituary in 2005. This paper may be the first comprehensive biography of this remarkable chemist written in Japanese.

  7. Model of contract of purchase of the electric power produced by facilities that use the energy of aquifers or of underground rocks and benefiting from the electricity purchase obligation. Established after enforcement of the article 5 of the decree from May 10, 2001 and approved by the minister attended to electricity; Modele de contrat d'achat de l'energie electrique produite par les installations utilisant l'energie des nappes aquiferes ou des roches souterraines et beneficiant de l'obligation d'achat d'electricite. Etablie en application de l'article 5 du decret du 10 mai 2001 et approuve par le Ministre charge de l'electricite

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    2001-07-01

    This model of contract comprises 2 parts. The first part describes the general conditions of electric power purchase: aim of the contract, connection to the grid and delivery point, producer's facility, reciprocal commitments and stoppages for maintenance purpose, energy and power metering and control, energy delivery, payment for the purchased power (payment and payment indexing), taxes, payments, contract enforcement, date line, suspension, modification or cancellation, conciliation in case of dispute. A recall of the tariffs mentioned in the by-law from March 13, 2002, of the approximation rules and a model of certificate are given in appendixes. The second part gives some complements to the general conditions (purchaser and producer corporate, characteristics of the facility, details about the connection and delivery point, description of the metering system, tariffs of purchase and indexing, payment of bills, contract characteristics, subscription for a power supply contract). (J.S.)

  8. SWIFT J1749.4-2807: A neutron or quark star?

    CERN Document Server

    Yu, Junwei

    2010-01-01

    We investigate an unique accreting millisecond pulsar with X-ray eclipses, SWIFT J1749.4$-$2807 (hereafter J1749), and try to limit the binary system by various methods including that of the Roche lobe, the mass-radius relations of both a main sequence (MS) and a white dwarf (WD) companion stars, as well as the measured mass function of the pulsar. The calculations are based on the assumption that the radius of the companion star has reached its Roche radius (or at 90\\%), but the pulsar's mass has not been assumed to be a certain value. Our results are as follows. The companion star should be a MS. For the case that the radius equals to its Roche one, we have a companion star with mass $M\\simeq 0.51 M_{\\odot}$ and radius $R_{\\rm c}\\simeq 0.52R_{\\odot}$, and the inclination angle is $i\\simeq 76.5^{\\circ}$; for the case that the radius reaches 90\\% of its Roche one, we have $M\\simeq 0.43M_{\\odot}$, $R_{\\rm c}\\simeq 0.44R_{\\odot}$ and $i\\simeq 75.7^{\\circ}$. We also obtain the mass of J1749, $M_{\\rm p}\\simeq 1M_...

  9. Theory of the Tetragonal-to-Orthorhombic Structural Phase Transition in La2CuO4.

    Science.gov (United States)

    1987-11-01

    J. G. Bednorz and K. A. Muller, Z. Phys. B j4, 189 (1986). 2. C. W. Chu, P. H. Hor, R. L. Meng, L. Gao, Z. J. Huang and Y. Q. Wang , Phys. Rev. Lett...Chemistry University of2 chester Pennsylvania State University Roches ew York 14627 University Park, Pennsylvania 16802 r. G. Rubloff Dr. Roald

  10. Salivary cortisol and cortisone responses to tetracosactrin (synacthen).

    Science.gov (United States)

    Cornes, Michael P; Ashby, Helen L; Khalid, Yasmeen; Buch, Harit N; Ford, Clare; Gama, Rousseau

    2015-09-01

    To establish cutoff values for salivary liquid chromatography tandem mass spectroscopy cortisol and cortisone in defining adequate adrenocortical function during a standard synacthen test. We compared salivary liquid chromatography tandem mass spectroscopy cortisol and cortisone responses to those of serum cortisol measured on the Roche E170 immunoassay analyser and the Abbott Architect i2000 before and 30 min and 60 min following 0.25 mg of intravenous synacthen. Correlations of salivary cortisol and cortisone were bimodal and linear, respectively. Based on these correlations, adequate salivary cortisol and cortisone responses to synacthen were extrapolated from a serum cortisol (Roche) cut-off of 550 nmol/L and defined as 15 nmol/L and 45 nmol/L, respectively. The Abbott method correlated well with the Roche but gave results that were about 20% lower than the Roche method. Measurement of salivary cortisol and cortisone responses offers an alternative to those of serum cortisol during a synacthen test in the investigation of adrenal hypofunction. © The Author(s) 2015.

  11. High Frequency Acoustic Recording Package Data Summary Report, PS 05, August 4, 2008 - January 6, 2009

    Science.gov (United States)

    2010-08-01

    frequency bins; middle panel – humpback whale ( Megaptera novaeangliae ) song, sampling frequency 10 kHz, 5 s/10 Hz time/frequency bins; lower panel...Roch San Diego State University San Diego, CA Anne Douglas Cascadia Research Collective Olympia, WA Julie Rivers COMPACFLT Pearl

  12. Replacement Solvent Identification for the Laundry and Decontamination Drycleaning System (LADDS)

    Science.gov (United States)

    1992-10-01

    Daikin Industries Chemical producer DuPont-Mitsui Fluorochemicals Chemical producer Ebara Equipment manufacturer Hitachi Ltd. Equipment...out schedules have seriously impacted several manufacturers’ decisions to move ahead with these compounds (Akzo, Allied, Asahi, Central, Daikin ...companies include Akzo Chemicals, Allied-Signal, Asahi Glass, Elf Atochem, Daikin Industries, DuPont, Hoechst Celanese, ICI, LaRoche Chemicals

  13. Evaluation of a radioimmunoassay (/sup 125/I) kit for cannabinoid metabolites in urine and whole blood

    Energy Technology Data Exchange (ETDEWEB)

    Childs, P.S.; McCurdy, H.H.

    The Abuscreen kit (Roche Diagnostics) for the analysis of 11-nor-..delta../sup 9/-tetrahydrocannabinol-9-carboxylic acid and other cannabinoids in urine was evaluated in terms of its accuracy, reproducibility, and sensitivity. A procedure is also presented for the analysis of total cannabinoids in whole blood using the RIA kit.

  14. Circulating cell free DNA as a predictor of systemic lupus ...

    African Journals Online (AJOL)

    Olfat M. Hendy

    2015-07-29

    Jul 29, 2015 ... ... function tests,. C-reactive protein (CRP), routine autoantibodies for autoimmune diseases, complements (C3 & .... control group. All patients were subjected to: full history and thorough ... (Japan), kidney function tests on Integra 400 (Roche- ..... revised criteria for the classification of systemic lupus erythe-.

  15. 75 FR 42455 - Novartis Pharmaceuticals Corp. et al.; Withdrawal of Approval of 27 New Drug Applications and 58...

    Science.gov (United States)

    2010-07-21

    ..., Inc., Roche Pharmaceuticals, 340 Kingsland St., Nutley, NJ 07110-1199 NDA 18-101 Symmetrel (amantadine... HUMAN SERVICES Food and Drug Administration Novartis Pharmaceuticals Corp. et al.; Withdrawal of... Novartis Pharmaceuticals Corp., One Health Plaza, East Hanover, NJ 07936-1080 NDA 9-000 Cafergot...

  16. Vitamins, Minerals, and Herbs in MS: An Introduction

    Science.gov (United States)

    ... Novartis Corp. Valium ® is a registered trademark of Roche Products, Inc. Xanax ® is a registered trademark of Pharmacia & UpJohn Zanaflex ® is a registered trademark of Elan Pharmaceuticals Inc. Zoloft ® is a registered trademark of Pfizer, ...

  17. Assessment of Recent Process Analytical Technology (PAT) Trends: A Multiauthor Review

    DEFF Research Database (Denmark)

    Simon, Levente L.; Pataki, Hajnalka; Marosi, György

    2015-01-01

    in industrial laboratories and in manufacture e.g. at GSK, AstraZeneca and Roche. Furthermore, the paper discusses the PAT paradigm from the regulatory science perspective. Given the multidisciplinary nature of PAT, such an endeavour would be almost impossible for a single author, so the concept...

  18. 77 FR 16039 - Abbott Laboratories et al.; Withdrawal of Approval of 35 New Drug Applications and 64 Abbreviated...

    Science.gov (United States)

    2012-03-19

    ...) Pharmaceuticals, Implants. Inc. NDA 020828 Fortovase Hoffman-La Roche, (saquinavir) Inc. Capsules, 200 mg. NDA.../a HCl) Tablets and Wyeth Capsules and Artane Pharmaceuticals, (trihexyphenidyl) P.O. Box 8299... 46285. NDA 017577 Ditropan (oxybutynin Janssen chloride) Tablets. Pharmaceuticals Inc., c/o Johnson...

  19. Molecular Basis for Mycophenolic Acid Biosynthesis in Penicillium brevicompactum

    DEFF Research Database (Denmark)

    Regueira, Torsten Ulrik Bak; Kildegaard, Kanchana Rueksomtawin; Hansen, Bjarne Gram

    2011-01-01

    Mycophenolic acid (MPA) is the active ingredient in the increasingly important immunosuppressive pharmaceuticals CellCept (Roche) and Myfortic (Novartis). Despite the long history of MPA, the molecular basis for its biosynthesis has remained enigmatic. Here we report the discovery of a polyketide...

  20. Extension of a Computer Assisted Decision Support (CADS) Study to Improve Outcomes in Patients with Type 2 DM Treated by Primary Care Providers (short title, CADS-X). Addendum

    Science.gov (United States)

    2014-12-01

    and more pharmaceuticals used. Yet, many patients do not monitor as recommended, in part because of the barriers noted above (e.g., they perceive...received Roche USBs and adaptors to give to the patients to upload glucometer data from home. c. Uploading glucose data has been problematic for

  1. Introducción al estudio de la petrografía del macizo de garzón (huila-colombia)

    OpenAIRE

    Radelli, Luigi

    2011-01-01

    L'A. expose le résultat de ses ètudes pétrographiques sur les migmatites et les anatexites du Massif de Garzón; il donne des descriptions des différentes roches observées et il fait des considérations genètiques.

  2. Investigating the Regulation and Potential Role of Nonhypoxic Hypoxia-Inducible Factor 1 (HIF-1) in Aromatase Inhibitor Resistant Breast Cancer

    Science.gov (United States)

    2012-10-01

    protease and phosphatase inhibitors (Roche) by sonication and incubation for 20 min at 4 C. Lysed samples were centrifuged at 14,000 rpm for 20 min...Dontu G, Mantle ID, Patel S, Ahn NS, Jackson KW, Suri P, Wicha MS (2006) Hedgehog signaling and Bmi-1 regulate self- renewal of normal and malignant

  3. False high level in total bilirubin estimation in nonicteric serum ...

    African Journals Online (AJOL)

    PROMOTING ACCESS TO AFRICAN RESEARCH ... International Journal of Biological and Chemical Sciences ... In day to day clinical biochemistry laboratory practices, occasionally abnormal levels of individual parameters are noted. ... of using very reliable and stable reagent kit from Roche in the biochemistry laboratory ...

  4. Cycle relations on Jacobian varieties. With an appendix by Don Zagier.

    NARCIS (Netherlands)

    van der Geer, G.B.M.; Kouvidakis, A.

    2007-01-01

    Abstract: By using the Grothendieck-Riemann-Roch theorem we derive cycle relations modulo algebraic equivalence in the Jacobian of a curve. The relations generalize the relations found by Colombo and van Geemen and are analogous to but simpler than the relations recently found by Herbaut. In an appe

  5. Les Basaltes de l’Atlas de Béni-Mellal (Haut Atlas Central, Maroc : un Volcanisme Transitionnel Intraplaque Associé aux Stades de L’évolution Géodynamique du Domaine Atlasique

    Directory of Open Access Journals (Sweden)

    Jaouad Guezal

    2013-07-01

    Full Text Available Les roches basaltiques de l’Atlas de Béni-Mellal (Haut-Atlas Central, Maroc, mises en place, dans les différents bassins synclinaux de la région, se manifestent en deux horizons volcaniques B1 et B2. Les deux événements éruptifs sont d’âge Jurassique moyen pour les coulées de l’horizon B1 et d’âge Crétacé inférieur pour celles de l’horizon B2. Les roches sont caractérisées par un faciès des basaltes à olivines. La composition de leurs clinopyroxènes est marquée par deux tendances : augite au niveau des basaltes à olivine du B1 et diopside au niveau de ceux du B2. La composition géochimique sur roche totale dévoile le caractère transitionnel de ces roches. La relative dissimilitude géochimique signalée au niveau des basaltes des deux horizons peut être expliquée par un début du changement de la nature du magmatisme de la région en relation avec l’évolution géodynamique du domaine atlasique.

  6. Validation of a norovirus multiplex real-time RT-PCR assay for the detection of norovirus GI and GII from faeces samples.

    LENUS (Irish Health Repository)

    Jones, S

    2011-01-01

    Norovirus is a leading cause of infectious non-bacterial gastroenteritis. The virus is highly contagious and has multiple modes of transmission, presenting a growing challenge to hospital-based healthcare. In this study, a total of 120 stool samples are tested for the presence of norovirus GI and GII by the Roche two-step Lightcycler 2.0 assay incorporating primers and probes produced by TIB Molbiol, and the results are compared with results from the National Virus Reference Laboratory. The Roche\\/TIB Molbiol assay produced 51 positive results and 69 negative results. Discrepancy analysis was performed for six conflicting results using a second real-time polymerase chain reaction (PCR) assay (Roche\\/TIB Molbiol) and this confirmed that four of the five discrepant positive results were true positives. A single discrepant negative result generated by the Roche assay remained negative using the second assay. Sensitivity, specificity, positive predictive value (PPV) and negative predictive value (NPV) were calculated to be 98%, 98.6%, 98.0% and 98.6%, respectively. Melting curve analysis was used to differentiate genogroups I and II and this showed that 92% of strains belonged to genogroup II.

  7. 78 FR 25259 - Notice of Intent To Grant an Exclusive License; Integrata Security, LLC

    Science.gov (United States)

    2013-04-30

    ... filed with the National Security Agency Technology Transfer Program, 9800 Savage Road, Suite 6848, Fort George G. Meade, MD 20755-6848. FOR FURTHER INFORMATION CONTACT: Marian T. Roche, Director, Technology Transfer Program, 9800 Savage Road, Suite 6848, Fort George G. Meade, MD 20755-6848, telephone (443)...

  8. Improving the Cybersecurity of U.S. Air Force Military Systems Throughout Their Life Cycles

    Science.gov (United States)

    2015-01-01

    James D. Powers, Elizabeth Bodine-Baron, Bernard Fox, Lauren Kendrick, Michael H. Powell Report Documentation Page Form ApprovedOMB No. 0704...rather than by an inherently secure design. 7 See also Baldwin , Dahmann, and Goodnight, 2011. 7...of more proximate objectives. A common pitfall of analysis is to adopt as goals the most clearly defined and easily measured phenomena. James Roche

  9. La arquitectura revisionista y orgánica en Estados Unidos

    OpenAIRE

    González Capitel, Antón

    1996-01-01

    5. La arquitectura revisionista y orgánica en Estados Unidos 5. l. Desarrollo y revisión de la arquitectura moderna: Philip Johnson y Paul Rudolph 5. 2. Eclecticismo y organicismo en la obra de Eero Saarinen 5. 3. La obra de Kevin Roche

  10. Development of an oral dosage form of capecitabine with modified release characteristics

    NARCIS (Netherlands)

    Meulenaar, J

    2013-01-01

    Capecitabine is an orally-administered chemotherapeutic agent used in the treatment of a.o. metastatic breast, gastric and colorectal cancer and is commercially available as an immediate release tablet (Xeloda®, Roche). Capecitabine is a pre-pro-drug that is enzymatically converted into 5-fluorourac

  11. The Advantage of Reading over Listening Text Comprehension in Down Syndrome: What Is the Role of Verbal Memory?

    Science.gov (United States)

    Roch, Maja; Florit, Elena; Levorato, M. Chiara

    2012-01-01

    The current study was designed to investigate the role played by verbal memory in the advantage shown by individuals with Down syndrome in reading over listening text comprehension (Roch & Levorato, 2009). Two different aspects of verbal memory were analyzed: processing load and coding modality. Participants were 20 individuals with Down syndrome,…

  12. Formal synthesis of (+)-discodermolide.

    Science.gov (United States)

    Francavilla, Charles; Chen, Weichun; Kinder, Frederick R

    2003-04-17

    [structure: see text] Herein we report the formal total synthesis of (+)-discodermolide in 21 steps (longest linear sequence) from commercially available Roche ester. This synthesis features the assembly of C(9-18) and C(19-24) fragments via a metal-chelated aldol coupling reaction.

  13. Molecular Basis for Mycophenolic Acid Biosynthesis in Penicillium brevicompactum

    DEFF Research Database (Denmark)

    Regueira, Torsten Ulrik Bak; Kildegaard, Kanchana Rueksomtawin; Hansen, Bjarne Gram;

    2011-01-01

    Mycophenolic acid (MPA) is the active ingredient in the increasingly important immunosuppressive pharmaceuticals CellCept (Roche) and Myfortic (Novartis). Despite the long history of MPA, the molecular basis for its biosynthesis has remained enigmatic. Here we report the discovery of a polyketide...

  14. Operate A Chemical Surety Program And Studies Supporting The Medical Chemical Defense Research Program

    Science.gov (United States)

    2010-05-01

    Administrations Following Intravenous Poisoning with Potassium Cyanide in Adult Male Beagle Dogs...Administrations Following Intravenous Poisoning with Potassium Cyanide in Adult Male Beagle Dogs Task Leader: Dr. Frances Reid / Dr. Brian Roche...agents, synthesis , pharmacokinetics, efficacy testing, seizure control, bioscavengers, toxicology testing and test kit evaluations. In addition, TO

  15. Characterization of Marine Mammal Recordings from the Hawaii Range Complex

    Science.gov (United States)

    2010-11-01

    Germany. 100 pp. Baumann-Pickering, S., S. M. Wiggins, E. Roth , M. A. Roch, H.-U. Schnitzler, and J. A. Hildebrand. (2010). “Echolocation...Institution Woods Hole, MA Ian Boyd University of St. Andrews St. Andrews, Scotland , UK 1 1 1 1 1

  16. 77 FR 2071 - Medical Devices; Availability of Safety and Effectiveness Summaries for Premarket Approval...

    Science.gov (United States)

    2012-01-13

    ..., 2011. P110020, FDA-2011-M-0601...... Roche Molecular COBAS 4800 BRAF V600 MUTATION August 17, 2011. Systems, Inc.. TEST. P110012, FDA-2011-M-0630...... Abbott Molecular, VYSIS ALK BREAK APART FISH PROBE August 26, 2011. Inc.. KIT; VYSIS PARAFFIN PRETREATMENT IV & POST HYBRIDIZATION WASH BUFFER KIT...

  17. Kevin Stuart among Mongolian English-learners in Huhhot in the Mid-1980s

    Directory of Open Access Journals (Sweden)

    Mandula Borjigin

    2015-07-01

    Full Text Available Mandula Borjigin, Narisu Narisu, and Chuluu Ujiyediin. 2015. Kevin Stuart among Mongolian English-learners in Huhhot in the Mid-1980s in Gerald Roche, Keith Dede, Fernanda Pirie, and Benedict Copps (eds Asian Highlands Perspectives 37 Centering the Local, A Festschrift for Dr. Charles Kevin Stuart on the Occasion of his Sixtieth Birthday, 296-298.

  18. Disease: H01221 [KEGG MEDICUS

    Lifescience Database Archive (English)

    Full Text Available the epithelium are the hallmarks of EBMD. Most patients are asymptomatic before ...roche L, Abitbol M, Schorderet DF A subset of patients with epithelial basement membrane corneal dystrophy have mutations in TGFBI/BIGH3. Hum Mutat 27:553-7 (2006) ...

  19. Distinguishing Plasmodium falciparum treatment failures from re-infections by using polymerase chain reaction genotyping in a holoendemic area in northeastern Tanzania

    DEFF Research Database (Denmark)

    Magesa, S M; Mdira, K Y; Farnert, A

    2001-01-01

    susceptibility to a combination of sulfadoxine/pyrimethamine (Fansidar; F. Hoffmann La Roche, Basel, Switzerland). Blood samples were collected before treatment and on days 7, 14, or 28 post-treatment in 51 asymptomatic children, of which 26 could not clear parasitemia within seven days post-treatment. Among...

  20. Research in Pulsed Power Plasma Physics

    Science.gov (United States)

    1993-11-01

    constraints will preclude the use of channels with much with a Tesla coil. Nor is uniformity improved by the use of larger wall radii. a 3 kA prepulse. Driving...Oliphant. 12C. Bruno, J. Delvaux. A. Nicolas . and M. Roche, IEEE Trans. Plasma and P. F. Ottinger. App!. Phys. Lett. 45. 1043 (1984).ISci. PS-IS, 686

  1. Two new species of Metrosideros (Myrtaceae) from New Caledonia: dual characterisation with morphology and nrDNA sequence variation

    NARCIS (Netherlands)

    Dawson, John W.; Whitaker, Anthony H.; Whitaker, Vivienne A.; Gardner, Richard C.; Wright, Shane D.

    2000-01-01

    We have identified two new species of Metrosideros subg. Mearnsia (Myrtaceae) growing on, and apparently endemic to, the massif known as the Roches d’Ouaïème in New Caledonia. Of these two species, we include M. whitakeri in sect. Mearnsia and M. rotundifolia in sect. Calyptropelala. Both morphologi

  2. Human Systems Integration Competency Development for Navy Systems Commands

    Science.gov (United States)

    2012-09-01

    training is not always able to ameliorate poor personnel selection and costs a company time, money, and lost productivity (Mathis & Jackson, 2011...scale agrement among many raters. Psychological Bulletin, 76(5), 378–382. Gates, S. M. (2009). Shining a spotlight on the defense acquisition...9. Dennis White NSWD Dahlgren Dahlgren, Virginia 10. Patrick G. Roche SPAWAR San Diego, California

  3. Mutational Analysis of GATA4 and NKX2.5 Genes in Dilated ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research February 2016; 15 (2): 285-292. ISSN: 1596-5996 (print); ... in regulating survival and hypertrophic growth of the adult heart. .... USA), 125 mmol/l of each dNTP (Roche,. Germany), 1.5 mmol/l ...

  4. Emodin inhibits proliferation and invasion, and induces apoptosis in ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research April 2017; 16 (4): 781-785. ISSN: 1596-5996 (print); ... effect of emodin on the growth of esophageal cancer cells. ... FLUOS Staining Kit (Roche, USA) following the protocol provided by the kit ...

  5. Anti-oxidative and anti-neuroinflammatory effects of ethyl acetate ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research June 2016; 15 (6): 1175-1181. ISSN: 1596-5996 ... induced increase in TNF-α level (p < 0.01at concentrations of 40 and 80 μg/mL) in BV-2 cells. .... MiniTM, Roche, Mannheim, Germany). The.

  6. white leghorn chimeras based on bone marrow mesenchymal stem ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research April 2017; 16 (4): 761-769. ISSN: 1596-5996 (print); .... USA), epithelial growth factor (EGF, 10 ng/mL). (Sigma) and ... applied using a LightCycler system (Roche,. Rotkreuz, Switzerland) ...

  7. (Emblica officinalis, Gaertn) in Streptozotocin-Induced Diabetes ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research May 2015; 14(5): 801-806. ISSN: 1596-5996 (print); ... increase in the prevalence of diabetes during the past few years [2]. ... Assays (Roche) were used for the determination of serum glucose ...

  8. Isolation of OmpA gene from Salmonella typhimurium and ...

    African Journals Online (AJOL)

    user

    2011-01-31

    Jan 31, 2011 ... 2Department of Medical Biotechnology, University of Tarbiat Modares, Iran. Accepted 8 October .... with BamH I and Sac I (Roche Applied Science). ... Axenic plants of alfalfa were maintained under in vitro growth conditions at ...

  9. Understanding the epidemic of HIV in South Africa

    African Journals Online (AJOL)

    growth rate and probable asymptotic prevalence of HIV among women attending ... intrinsic growth rate of the epidemic in different provinces and the ..... A pharma meta-anal. Fran'rois W. Osman Eb. Objectives assess the antibiotic ... treatment assumptio. Outcome. Franyois. Anderson. A Nixon A. Roche Pr. Osman E.

  10. Hypoglycaemic Activity of Acalypha fruticosa Forssk Extracts in ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research August 2015; 14 (8): 1445-1450. ISSN: 1596-5996 (print); ... and this prevalence will increase to 439 million people, 7.7 % of the .... 311 analyzer (Roche Diagnostics - GmbH, D-. 68298 Mannheim ...

  11. Download this PDF file

    African Journals Online (AJOL)

    acer

    1Department of Pharmacology and Therapeutics, Faculty of Pharmaceutical Sciences, Ahmadu Bello .... Diazepam (Roche, .... that diazepam (0.5 mg/kg) elicited a significant increase (P< 0.05) in the number of foot slips compared to the ...

  12. 1 and CTGF in Rats with Early Diabetic Nephropathy

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research January 2016; 15 (1): 55-64 ... significantly reversed the increase (1.67 and 1.41 vs 2.73 in glomeruli, 9.86 and 9.49 VS 13.18 in glomerular .... glucose monitor (Roche, Switzerland). Electron ...

  13. Radiation of accretion discs: the eclipses

    Energy Technology Data Exchange (ETDEWEB)

    Schwarzenberg-Czerny, A.

    1984-05-01

    Light curves have been calculated for eclipses of the accretion disc in a cataclysmic binary. The Roche geometry of the cool component was taken into account and the stellar atmospheres were interpolated to provide the local spectrum of the radiation from the disc. The dependence of the light curve on the parameters of the disc is discussed.

  14. Nonlinear Time Series Analysis via Neural Networks

    Science.gov (United States)

    Volná, Eva; Janošek, Michal; Kocian, Václav; Kotyrba, Martin

    This article deals with a time series analysis based on neural networks in order to make an effective forex market [Moore and Roche, J. Int. Econ. 58, 387-411 (2002)] pattern recognition. Our goal is to find and recognize important patterns which repeatedly appear in the market history to adapt our trading system behaviour based on them.

  15. Relationships between Organizational Commitment, Core Job Characteristics, and Organizational Citizenship Behaviors in United States Air Force Organizations

    Science.gov (United States)

    2006-06-01

    fact, former Secretary of the Air Force James Roche made retaining Air Force personnel the Air Force’s number one priority and made the retention of...could therefore be used to redesign health organizations in Malaysia to promote commitment (Pearson & Chong, 1997). Although feedback was found not

  16. Forging a Combat Mobility Culture

    Science.gov (United States)

    2006-04-01

    and SECAF James Roche promoted the concept of a culture change within the air mobility community in their November 2003 USAF Transformation Flight...United Kingdom Austria Libya Venezuela Bahrain Malawi Yugoslavia Belgium Malaysia Yugoslavia Benin Mali Zambia Bosnia Mauritius Zimbabwe Botswana

  17. Pharmaceutical quality of nine generic orlistat products compared with Xenical(r).

    OpenAIRE

    Taylor, P. W.; Arnet, I; Fischer, A; Simpson, I N

    2010-01-01

    OBJECTIVE: To compare the pharmaceutical quality of Xenical (chemically produced orlistat) with nine generic products, each produced by fermentation processes. METHODS: Xenical 120 mg capsules (Roche, Basel, Switzerland) were used as reference material. Generic products were from India, Malaysia, Argentina, Philippines, Uruguay, and Taiwan. Colour, melting temperature, crystalline form, particle size, capsule fill mass, active pharmaceutical ingredient content, amount of impurities, and disso...

  18. Subcellular Responses to Narrowband and Wideband Radiofrequency Radiation

    Science.gov (United States)

    2008-02-15

    Lumpur, Malaysia , June 4-6, 2007. (in press). U. Pliquett, T. Nacke, and K. Schoenbach, "High frequency and low concentration - limitation for...Weintraub, Ph.D, Co-Investigator Mohan Natarajan, Ph.D, Co-Investigator Bijaya Nayak, Ph.D. Norma Vela- Roche , M.S. Cynthia Galindo, B.S. Kevin Hakalah

  19. Rapid Identification of Vector-Borne Flaviviruses by Mass Spectrometry

    Science.gov (United States)

    2010-02-01

    Roche Light- Cycler as described [34]. 2.6. Primer design Eight primer pairs were designed to target the various members of the genus Flavivirus...Langat LGTV TP-21 Tick/ Malaysia /1956 EU790644 Omsk hemorrhagic fever virus OHFV Belangul Human/1947 NR Powassan POWV LB Human/Canada/1958 L06436 a Tick

  20. Fouling and Boring of Glass Reinforced Plastic - Balsa Blocks in a Tropical Marine Environment,

    Science.gov (United States)

    1983-03-01

    Marshall + + Tbrahim 2]) SausItora ? globosa (Sivickis) + + Bankia fimbziatula moll a Roch + + TOTAL 3 2 7 4 Table 6 litent of borer damage (mean ± s.d.) to...Research Centre, Kuala Lumpur, Malaysia Exchange Section, British Library, U.K. Periodicals Recording Section, Science Reference Library, British

  1. Multiple nuclear ortholog next generation sequencing phylogeny of Daucus

    Science.gov (United States)

    Next generation sequencing is helping to solve the data insufficiency problem hindering well-resolved dominant gene phylogenies. We used Roche 454 technology to obtain DNA sequences from 93 nuclear orthologs, dispersed throughout all linkage groups of Daucus. Of these 93 orthologs, ten were designed...

  2. The complete nucleotide sequence of chrysanthemum stem necrosis virus

    NARCIS (Netherlands)

    Dullemans, A.M.; Verhoeven, J.Th.J.; Kormelink, R.J.M.; Vlugt, van der R.A.A.

    2015-01-01

    The complete genome sequence of chrysanthemum stem necrosis virus (CSNV) was determined using Roche 454 next-generation sequencing. CSNV is a tentative member of the genus Tospovirus within the family Bunyaviridae, whose members are arthropod-borne. This is the first report of the entire RNA genome

  3. Spiral Learning: An Introductory Course on Reading LOTE Online

    Science.gov (United States)

    Schuetze, Ulf

    2010-01-01

    In teaching reading, authentic texts with abundant lexical items and complex grammatical structures are typically used (Roche, 1992). Unfortunately, this has been a challenge for students enrolled in reading courses developed for English as a Second Language (ESL) as well as Languages Other Than English (LOTE) students. Students often translate…

  4. Hepatoprotective Effect of Pandanus odoratissimus L Inflorescence ...

    African Journals Online (AJOL)

    Tropical Journal of Pharmaceutical Research February 2016; 15 (2): 259-266. ISSN: 1596-5996 (print); .... Malaysia; known by locals in India as Ketaki, is used in Ayurvedic .... Cobas C 311 analyzer (Roche Diagnostics -. GmbH, D-68298 ...

  5. [Examples of the keeping of drugs during the XVIth, XVIIth and XVIIIth centuries: silenes and drawers].

    Science.gov (United States)

    Fievet, B

    1998-01-01

    Silenes are wooden boxes with colourful paintings for the keeping of drugs and can be found nowadays in three collections in France: Hotel-Dieu in Troyes (Aube), a pharmacy in Bauge (Maine-et-Loire) and St-Roch museum in Issoudun (Indre). Drawers can be related to silenes but they are more ordinary and less attractive.

  6. Analysis of Proton Transport Experiments.

    Science.gov (United States)

    1980-09-05

    AGENCY NAME & ADDRESS(if different from Controlling Office) IS. SECURITY CLASS. (of this report) Sandia Laboratories Albuquerque, New Mexico 87115...B. 14 21120 Is-sur-Tille France Attn: C. Patou 1 copy C. Peugnet 1 copy M. Roche 1 copy N. Camarcat 1 copy C. Bruno 1 copy J. Barbaro 1 copy Ecole

  7. Massively parallel pyrosequencing of the mitochondrial genome with the 454 methodology in forensic genetics

    DEFF Research Database (Denmark)

    Mikkelsen, Martin; Frank-Hansen, Rune; Hansen, Anders Johannes;

    2014-01-01

    RESULTS: of sequencing of whole mitochondrial genome, HV1 and HV2 DNA with the second generation system (SGS) Roche 454 GS Junior were compared with results of Sanger sequencing and SNP typing with SNaPshot single base extension detected with MALDI-TOF and capillary electrophoresis. We investigat...

  8. Gut microbial markers are associated with diabetes onset, regulatory imbalance, and IFN-γ level in NOD mice

    DEFF Research Database (Denmark)

    Krych, Lukasz; Nielsen, Dennis Sandris; Hansen, Axel Kornerup;

    2015-01-01

    between the early gut microbiota and immune parameters of non-obese diabetic (NOD) mice in order to select alleged bacterial markers of T1D. Gut microbial composition in feces was analyzed with 454/FLX Titanium (Roche) pyro-sequencing and correlated with diabetes onset age and immune cell populations...

  9. Probing thermonuclear burning on accreting neutron stars

    NARCIS (Netherlands)

    Keek, L.

    2008-01-01

    Neutron stars are the most compact stars that can be directly observed, which makes them ideal laboratories to study physics at extreme densities. Neutron stars in low-mass X-ray binaries accrete hydrogen and helium from a lower-mass companion star through Roche lobe overflow. This matter undergoes

  10. Negative Suppressors of Oncogenic Activation of the Met Receptor Tyrosine Kinase

    Science.gov (United States)

    2008-09-01

    We thank members of the Park lab, Dr. Sergio Grinstein and Dr. Stephane Laporte for their helpful comments on the manuscript. We would like to...of Hrs couples receptor sorting to vesicle formation. Journal of cell science 116: 4169-4179 Veracini L, Franco M, Boureux A, Simon V, Roche S

  11. Trends in underlying causes of death in people with HIV from 1999 to 2011 (D:A:D)

    DEFF Research Database (Denmark)

    Smith, Colette J; Ryom, Lene; Weber, Rainer;

    2014-01-01

    BACKGROUND: With the advent of effective antiretroviral treatment, the life expectancy for people with HIV is now approaching that seen in the general population. Consequently, the relative importance of other traditionally non-AIDS-related morbidities has increased. We investigated trends over t...... Ingelheim, Bristol-Myers Squibb, Gilead Sciences, ViiV Healthcare, Merck, Pfizer, F Hoffmann-La Roche, and Janssen Pharmaceuticals....

  12. Performance of cobas® 4800 and m2000 real-time™ assays for detection of Chlamydia trachomatis and Neisseria gonorrhoeae in rectal and self-collected vaginal specimen

    NARCIS (Netherlands)

    Geelen, Tanja H; Rossen, John W; Beerens, Antoine M; Poort, Linda; Morré, Servaas A; Ritmeester, Wilma S; van Kruchten, Harry E; van de Pas, Masja M; Savelkoul, Paul H M

    2013-01-01

    A prospective, multicenter trial was designed to compare the performance characteristics of the cobas® 4800 (Roche Diagnostics, Indianapolis, IN, USA) and m2000 real-time™ (Abbott Molecular Inc., Des Plaines, IL, USA) assays for detection of Chlamydia trachomatis (CT) and Neisseria gonorrhoeae (NG)

  13. The determination of the parameters of the W Ser type-eclipsing binary system V367 Cyg.

    Science.gov (United States)

    Antokhina, Eh. A.; Menchenkova, E. V.

    Fresa's blue light curve of V367 Cyg was analyzed by the synthesis method in the Roche model and in the model with a geometrically thick disk. The new spectroscopic mass ratio q = M2/M1 = 1.57 was used. The basic parameters and the absolute dimensions of the system were obtained.

  14. Determination of the parameters of the eclipsing binary system V367 CYG by the light-curve synthesis method

    Science.gov (United States)

    Antokhina, E. A.; Menchenkova, E. V.

    1990-06-01

    Fresa's (1966) blue light curve of V367 Cyg is analyzed by the synthesis method in the framework of the Roche model and a model with a geometrically thick disk. The new spectroscopic mass ratio q = M2//M1 = 1.57 was used. The fundamental parameters and the absolute dimensions of the system were determined.

  15. The American cranberry mitochondrial genome reveals the presence of selenocysteine (tRNA-Sec and SECIS) insertion machinery in land plants

    Science.gov (United States)

    The American cranberry (Vaccinium macrocarpon Ait.) mitochondrial genome was assembled and reconstructed from whole genome 454 Roche GS-FLX and Illumina shotgun sequences. Compared with other Asterids, the reconstruction of the genome revealed an average size mitochondrion (459,678 nt) with comparat...

  16. Molecular Recognition of DNA. Synthesis of Novel Bases for Triple Helix Formation

    Science.gov (United States)

    1991-01-01

    Southern Lecturer Cancer Therapy into the 21st Century Symposium: Plenary Lecturer Hoffmann La Roche: Max Hoffer Memorial Lecturer Purdue University: H. C...Within the context of molecular engineering to atomic specifications, we view nucleic acids as a 1st generation "molecular lego set" that is very

  17. 电化学发光法联合检测HIV抗原抗体试剂的评价%The evaluation of Elecsys HIV Combi reagent in detecting HIV antigen and antibody

    Institute of Scientific and Technical Information of China (English)

    周琰; 宋斌斌; 郑晓虹; 郭玮; 潘柏申

    2011-01-01

    目的 评价Roche电化学发光法联合检测HIV抗原抗体试剂的检测性能.方法 收集包括健康献血员、人类免疫缺陷病毒( HIV)感染者、丙型肝炎病毒(HCV)抗体阳性和高危人群在内的血清样本1 327例.购买美国BBI公司的7套HIV血清转换盘共计51份血清样本.采用Roche cobas e411(架式系统)电化学全自动免疫分析仪和相应的检测试剂、校准品和质控品以及检测参数进行测定.以Roche Elecsys HIV Combi试剂盒为评估试剂,以生物梅里埃Vironostika Uni-FormⅡplus O HIV抗体试剂盒为参比试剂.定性检测血清HIV p24抗原和HIVl/2抗体并评价检测方法分析性能、结果一致性和血清转化灵敏度.结果 Roche Elecsys HIV Combi试剂盒批内和天间不精密度良好,符合临床使用要求.血清样本检测结果和参比试剂检测结果一致性完全符合.评估试剂的血清转化灵敏度比参比试剂平均提前了5.1d.结论 Roche Elecsys HIV Combi试剂盒具有良好的精密度和血清转换灵敏度,有利于筛查HIV早期感染,能为临床HIV早期诊断、随访监测提供有效的实验室诊断依据.%Objective To evaluate the performance of Roche Elecsys HIV Combi reagent in detecting HIV p24antigen and HIV1/2 antibody. Methods A total of 1 327 serum samples were collected for healthy subjects, patients with human immunodeficiency virus (HIV) infection and patients with antibody positive and high-risk hepatitis C virus ( HCV). The 1 327 serum samples were detected by Roche cobas e411 Elecsys HIV Combi reagent and Vironostika UniFormll plus 0 HIV reagent, respectively. The both reagents were used to detect 51 serum samples of 7 seroconversion panels from American BBI company, and the analytical performance, consistency and the sensitivity of seroconversion were evaluated. Roche Elecsys HIV Combi reagent was as evaluation reagent, and Vironostika Uni-Form II plus 0 HIV reagent was as reference reagent. Results The Roche Elecsys

  18. Baseline morning cortisol level as a predictor of pituitary-adrenal reserve: a comparison across three assays.

    Science.gov (United States)

    Sbardella, Emilia; Isidori, Andrea M; Woods, Conor P; Argese, Nicola; Tomlinson, Jeremy W; Shine, Brian; Jafar-Mohammadi, Bahram; Grossman, Ashley B

    2017-02-01

    The short ACTH stimulation test (250 μg) is the dynamic test most frequently used to assess adrenal function. It is possible that a single basal cortisol could be used to predict the dynamic response, but research has been hampered by the use of different assays and thresholds. To propose a morning baseline cortisol criterion of three of the most commonly used modern cortisol immunoassays - Advia Centaur (Siemens), Architect (Abbott) and the Roche Modular System (Roche) - that could predict adrenal sufficiency. Observational, retrospective cross-sectional study at two centres. Retrospective analysis of the results of 1019 Short Synacthen tests (SSTs) with the Advia Centaur, 449 SSTs with the Architect and 2050 SSTs with the Roche Modular System assay. Serum cortisol levels were measured prior to injection of 250 μg Synacthen and after 30 min. Overall, we were able to collate data from a total of 3518 SSTs in 3571 patients. Using receiver-operator curve analysis, baseline cortisol levels for predicting passing the SST with 100% specificity were 358 nmol/l for Siemens, 336 nmol/l for Abbott and 506 nmol/l for Roche. Utilizing these criteria, 589, 158 and 578 SSTs, respectively, for Siemens, Abbott and Roche immunoassays could have been avoided. We have defined assay-specific morning cortisol levels that are able to predict the integrity of the hypothalamo-pituitary-adrenal axis. We propose that this represents a valid tool for the initial assessment of adrenal function and has the potential to obviate the need for dynamic testing in a significant number of patients. © 2016 John Wiley & Sons Ltd.

  19. A PIONIER and incisive look at the interacting binary SS Lep

    CERN Document Server

    Blind, N; Berger, J -P; Lebouquin, J -B; Mérand, A

    2011-01-01

    Symbiotic stars are eccellent laboratories to study a broad range of poorly understood physical processes, such as mass loss of red giants, accretion onto compact objects, and evolution of nova-like outbursts. As their evolution is strongly influenced by the mass transfer episodes, understanding the history of these systems requires foremost to determine which process is at play: Roche lobe overflow, stellar wind accretion, or some more complex mixture of both. We report here an interferometric study of the symbiotic system SS Leporis, performed with the unique PIONIER instrument. By determining the binary orbit and revisiting the parameters of the two stars, we show that the giant does not fill its Roche lobe, and that the mass transfer most likely occurs via the accretion of an important part of the giant's wind.

  20. Introduction to the application of QbD principles for the development of monoclonal antibodies.

    Science.gov (United States)

    Finkler, Christof; Krummen, Lynne

    2016-09-01

    Quality by Design (QbD) is a global regulatory initiative with the goal of enhancing pharmaceutical development through the proactive design of pharmaceutical manufacturing process and controls to consistently deliver the intended performance of the product. The principles of pharmaceutical development relevant to QbD are described in the ICH guidance documents (ICHQ8-11). An integrated set of risk assessments and their related elements developed at Roche/Genentech were designed to provide an overview of product and process knowledge for the production of a recombinant monoclonal antibody. This chapter introduces a publication series on the application of Quality by Design for biopharmaceuticals, with a focus on the development of recombinant monoclonal antibodies. The development of and overview on the QbD concept applied by Roche and Genentech is described and essential QbD elements are presented.

  1. High-throughput sequencing offers insight into mechanisms of resource partitioning in cryptic bat species

    DEFF Research Database (Denmark)

    Razgour, Orly; Clare, Elizabeth L.; Zeale, Matt R.K.

    2011-01-01

    cryptic bat species that are sympatric in southern England (Plecotus austriacus and P. auritus) (Fig. 1). Using Roche FLX 454 (Roche, Basel, CH) high-throughput sequencing (HTS) and uniquely tagged generic arthropod primers, we identified 142 prey Molecular Operational Taxonomic Units (MOTUs) in the diet...... of the cryptic bats, 60% of which were assigned to a likely species or genus. The findings from the molecular study supported the results of microscopic analyses in showing that the diets of both species were dominated by lepidopterans. However, HTS provided a sufficiently high resolution of prey identification...... to determine fine-scale differences in resource use. Although both bat species appeared to have a generalist diet, eared-moths from the family Noctuidae were the main prey consumed. Interspecific niche overlap was greater than expected by chance (O(jk) = 0.72, P

  2. Meeting of Directors and Heads of Department from CEA-Saclay, France

    CERN Multimedia

    Patrice Loïez

    2002-01-01

    Directors and Heads of Department from the Saclay centre of the French atomic energy commission (CEA) visited CERN in December. Here, on a tour of CERN's LHC magnet test facility, LHC division leader Philippe Lebrun (right) explains to visitors the myriad connections of an LHC superconducting dipole magnet. Photo 01: Left to right: J.Y. Gascoin, J. Feltesse, J.-P. Pervès, and Ph. Lebrun. Photo 02: Left to right: L. Laurent, B. Mercier, M. Lieven, B. Mansoulié, M. Pallier, M. Roche, G. Carola, J.Y. Gascoin, A. Masurel, X. Vitart, F. Kircher, J. Feltesse, J.-P. Pervès, and H. Barbelin. Photo 03: Left to right: Ph. Pallier, M. Roche, P. Laurent, J.-Y. Gascoin, G. Carola, A. Masurel, J. Feltesse, J.-P. Pervès, H. Barbelin, and Ph. Lebrun.

  3. Biosimilars lining up to compete with Herceptin--opportunity knocks.

    Science.gov (United States)

    Nelson, Kevin M; Gallagher, Patrick C

    2014-11-01

    Trastuzumab is a monoclonal antibody developed by Genentech as a treatment for breast cancer and gastric cancer when the cancer cells overexpress HER2, a membrane-bound receptor activated by epidermal growth factor. Now marketed by Roche under the trade name Herceptin, trastuzumab has been readily adopted as treatment for some of the most invasive types of breast cancer. The cost for Herceptin is over $50,000 for a full course of treatment. With the development of regulatory pathways for biosimilar products, and the imminent expiry of patents covering Herceptin, several companies have developed biosimilar trastuzumab products. As biosimilar manufacturers look for opportunities to market biosimilar trastuzumab products, Roche has positioned itself to protect its market by developing additional anti-HER2 products complementary to Herceptin. The advent of competition from biosimilars should bring some opportunity for cost savings for patients, as well as incentive for continued advancement in development of better treatments to fight breast cancer.

  4. Le grès ferrugineux de Puisaye : provenance et utilisation architecturale

    Directory of Open Access Journals (Sweden)

    Lucile Subtil

    2008-09-01

    Full Text Available L’objectif de cette étude était de définir le faciès du grès ferrugineux de Puisaye ainsi que ses zones d’exploitation, puis de déterminer l’utilisation architecturale de cette roche dans les édifices monumentaux (XIe au XVIe siècle et d’en définir les aires de diffusion.Cette roche est issue d’intercalations gréseuses et locales à l’intérieur de l’importante formation détritique de l’Albien (Crétacé inférieur. Cet ensemble forme une écharpe, d’orientation sud-ouest - nord-est entre l’Yonne...

  5. Aspects expérimentaux des effets de l'eau sur l'altération des discontinuités rocheuses

    OpenAIRE

    DRUON, Jonathan

    2011-01-01

    Les chutes de blocs représentent le risque le plus fréquent rencontré en zone montagneuse. Il est donc primordial d'en connaître les mécanismes déclencheurs. La zone de faiblesse se situe au contact entre le bloc instable et la roche mère au niveau des ponts rocheux. Un des phénomènes d'altération majoritaire des roches calcaires à ce niveau est la dissolution. Ce travail expérimental a pour but de reproduire cette altération des ponts rocheux calcaires dans des conditions proches de c...

  6. NP Pavonis : Differential Corrections Analysis of the UBV Observations

    Directory of Open Access Journals (Sweden)

    M. A. Cerruti

    2003-01-01

    Full Text Available Se presenta el primer análisis fotoeléctrico de la binaria NP Pav basado en curvas de luz U, B y V y modelado usando el tratamiento de Wilson & Devinney. Las curvas están definidas por 3861 observaciones individuales. Las componentes y la orbita parecen, en general, ser estables. La primaria, más masiva y más luminosa, es la componente de mayor tamaño y está eclipsada en el mínimo primario y no llena su lóbulo de Roche (94%. La secundaria prácticamente llena su lóbulo de Roche (99% y tiene una diferencia de temperatura de =1330oK. Los elementos absolutos se obtuvieron suponiendo que la primaria sigue la relación masa-luminosidad.

  7. NP Pavonis : Differential Corrections Analysis of the UBV Observations

    OpenAIRE

    M. A. Cerruti

    2003-01-01

    Se presenta el primer análisis fotoeléctrico de la binaria NP Pav basado en curvas de luz U, B y V y modelado usando el tratamiento de Wilson & Devinney. Las curvas están definidas por 3861 observaciones individuales. Las componentes y la orbita parecen, en general, ser estables. La primaria, más masiva y más luminosa, es la componente de mayor tamaño y está eclipsada en el mínimo primario y no llena su lóbulo de Roche (94%). La secundaria prácticamente llena su lóbulo de Roche...

  8. A Code for Stellar Binary Evolution and its Application to the Formation of Helium White Dwarfs

    CERN Document Server

    Benvenuto, O G

    2003-01-01

    We present a numerical code intended for calculating stellar evolution in close binary systems. In doing so, we consider that mass transfer episodes occur when the stellar size overflows the corresponding Roche lobe. In such situation we equate the radius of the star with the equivalent radius of the Roche lobe. This equation is handled implicitly together with those corresponding to the whole structure of the star. We describe in detail the necessary modifications to the standard Henyey technique for treating the mass loss rate implicitly together with thin outer layers integrations. We have applied this code to the calculation of the formation of low mass, helium white dwarfs in low mass close binary systems. We found that the global numerical convergence properties are fairly good. In particular, the onset and end of mass transfer episodes is computed automatically.

  9. Tidal Forces in Naked Singularity Backgrounds

    CERN Document Server

    Goel, Akash; Roy, Pratim; Sarkar, Tapobrata

    2015-01-01

    The end stage of a gravitational collapse process can generically result in a black hole or a naked singularity. Here we undertake a comparative analysis of the nature of tidal forces in these backgrounds. The effect of such forces is generically exemplified by the Roche limit, which predicts the distance within which a celestial object disintegrates due to the tidal effects of a second more massive object. In this paper, using Fermi normal coordinates, we numerically compute the Roche limit for a class of non-rotating naked singularity backgrounds, and compare them with known results for Schwarzschild black holes. Our analysis indicates that there might be substantially large deviations in the magnitudes of tidal forces in naked singularity backgrounds, compared to the black hole cases. If observationally established, these can prove to be an effective indicator of the nature of the singularity at a galactic centre.

  10. Further considerations on contracting solar nebula

    Science.gov (United States)

    Rawal, J. J.

    1986-01-01

    Kepler's third law of the planetary system is analyzed in terms of Prentice's (1978a) modern Laplacian theory and Rawal's (1984) Roche limit concept. Prentice has determined, based on laws of conservation of mass and angular momentum and the concept of supersonic turbulent convection, that the ratio of orbital radii of successively disposed gaseous rings is a constant of approximately 1.69. Rawal studied the relationship between the supersonic turbulent convection concept and Roche limit and established a limit of 1.442. It is concluded that Kepler's law determines the rotation period of the sun at the time of its formation at the present radius to be equal to 0.1216 d. The correlation between orbital periods of the radii and resonant structure is investigated.

  11. Contraction of the solar nebula

    Science.gov (United States)

    Rawal, J. J.

    1984-10-01

    The concept of Roche limit is applied to the Laplacian theory of the origin of the solar system to study the contraction of a spherical gas cloud (solar nebula). In the process of contraction of the solar nebula, it is assumed that the phenomenon of supersonic turbulent convection described by Prentice (1978) is operative. It is found that the radius of the contracting solar nebula follows Titius-Bode law Rp = R_sun; ap, where R_sun; is the radius of the present Sun and a = 1.442. The consequences of the relation are also discussed. The aim, here, is an attempt to explain, on the basis of the concept of Roche limit, the distribution of planets in the solar system and try to understand the physics underlying it.

  12. An International Collaborative Study of Outcome and Prognostic Factors in Patients with Secondary CNS Involvement By Diffuse Large B-Cell Lymphoma

    DEFF Research Database (Denmark)

    El-Galaly, Tarec Christoffer; Cheah, Chan Yoon; Bendtsen, Mette Dahl

    2016-01-01

    .3). The median post-SCNS OS was 4 months (interquartile range 2-13) and the 2yr survival rate was 20% (95% CI 15-25) for the entire cohort. Associations between clinicopathologic features, management strategy, and post-SCNS survival are shown in Table 1, which excludes patients who did not receive any treatment...... and CNS involvement by DLBCL were associated with inferior outcomes. Upfront CNS prophylaxis did not influence post-SCNS OS. High-dose methotrexate (HDMTX) and/or platinum based treatment regimens (i.e. ICE, DHAP, or GDP [+/- IT treatment and/or radiotherapy], N=163) for SCNS were associated with reduced...... Myers Squib: Research Funding; NanoString Technologies: Research Funding; F Hoffmann-La Roche: Research Funding; Millennium Takeda: Research Funding; Seattle Genetics: Research Funding. Sehn: roche/genentech: Consultancy, Honoraria; amgen: Consultancy, Honoraria; seattle genetics: Consultancy, Honoraria...

  13. Studies of an x ray selected sample of cataclysmic variables. Ph.D. Thesis

    Science.gov (United States)

    Silber, Andrew D.

    1986-01-01

    Just prior to the thesis research, an all-sky survey in hard x rays with the HEAO-1 satellite and further observations in the optical resulted in a catalog of about 700 x-ray sources with known optical counterparts. This sample includes 43 cataclysmic variables, which are binaries consisting of a detached white-dwarf and a Roche lobe filling companion star. This thesis consists of studies of the x-ray selected sample of catalcysmic variables.

  14. Strategy, Requirements, and Forces The Rising Imperative of Air and Space Power

    Science.gov (United States)

    2003-02-01

    Operations,” Inside the Air Force, Nov. 1, 2002. 195 Donald Rumsfeld and Paul Wolfowitz , Pentagon news briefing, May 8, 2002. 196James G. Roche, Defense...Air Force Magazine, February 2002. 208 Lt. Gen. Charles Wald , USAF Deputy Chief of Staff for Air & Space Operations, interview with John Tirpak...2002. _______ and Deputy Secretary of Defense Paul Wolfowitz , Pentagon news briefing, May 8, 2002. RYAN, Gen. Michael E., Statement to the Senate Armed

  15. Malonyl-CoA Decarboxylase (MCD) as a Potential Therapeutic Target for Breast Cancer

    Science.gov (United States)

    2010-05-01

    of detection, using the ATP Bioluminescence Kit CLS II (Roche Diagnostics, Indianapolis, IN, USA) following the manufacturer’s protocol and read on a... ATP levels, and is cytotoxic to MCF7 cells, but not to human fibroblasts. In addition, we s ynthesized a s mall m olecule i nhibitor o f M CD, 5...Figure 1). Acetyl-CoA carboxylase (ACC), the rate limiting enzyme of fatty acid synthesis, produces malonyl-CoA from the ATP dependent carboxylation of

  16. SWIFT J1749.4-2807: A neutron or quark star?

    Institute of Scientific and Technical Information of China (English)

    Jun-Wei Yu; Ren-Xin Xu

    2010-01-01

    We investigate a unique accreting millisecond pulsar with X-ray eclipses,SWIFT J1749.4-2807(hereafter J1749),and try to set limits on the binary system by various methods including use of the Roche lobe,the mass-radius relations of both main sequence(MS)and white dwarf(WD)companion stars,as well as the measured mass function of the pulsar.The calculations are based on the assumption that the radius of the companion star has reached its Roche radius(or is at 90%),but the pulsar's mass has not been assumed to be a certain value.Our results are as follows.The companion star should be an MS one.For the case that the radius equals its Roche one,we have a companion star with mass M(~-)0.51 M⊙ and radius Rc(~-)0.52 R⊙,and the inclination angle is i(~-)76.5°; for the case that the radius reaches 90% of its Roche one,we have M(~-)0.43 M⊙,Re()0.44 R⊙ and i(~-)75.7°.We also obtain the mass of J1749,Mp(~-)1 M⊙,and conclude that the pulsar could be a quark star if the ratio of the critical frequency of rotation-mode instability to the Keplerian one is higher than~0.3.The relatively low pulsar mass(about~M⊙)may also challenge the conventional recycling scenario for the origin and evolution of millisecond pulsars.The results presented in this paper are expected to be tested by future observations.

  17. Application of next-generation sequencing for comparative transcriptome analysis

    OpenAIRE

    Shin, Heesun

    2010-01-01

    I have used novel whole transcriptome sequence data generated from massively parallel high-throughput next generation sequencing technologies, namely 454 pyrosequencing and Illumina sequencing, to perform comparative transcriptome analyses of C. elegans populations in specific biological conditions and developmental stages. Firstly, I have conducted transcriptome profiling of C. elegans in its first larval (L1) stage using data generated from the Roche 454 sequencing platform. I have used thi...

  18. Increasing Efficiency and Quality by Consolidation of Clinical Chemistry and Immunochemistry Systems with MODULAR ANALYTICS SWA

    OpenAIRE

    Mocarelli, Paolo; Horowitz, Gary L.; Gerthoux, Pier Mario; Cecere, Rossana; Imdahl, Roland; Ruinemans-Koerts, Janneke; Luthe, Hilmar; Calatayud, Silvia Pesudo; Salve, Marie Luisa; Kunst, Albert; McGovern, Margaret; Ng, Katherine; Stockmann, Wolfgang

    2008-01-01

    MODULAR ANALYTICS Serum Work Area (in USA Integrated MODULAR ANALYTICS, MODULAR ANALYTICS is a trademark of a member of the Roche Group) represents a further approach to automation in the laboratory medicine. This instrument combines previously introduced modular systems for the clinical chemistry and immunochemistry laboratory and allows customised combinations for various laboratory workloads. Functionality, practicability, and workflow behaviour of MODULAR ANALYTICS Serum Work Area were ev...

  19. Patent Law, Antitrust Enforcement, and Public Access to Pharmaceuticals and Medical Technologies

    OpenAIRE

    Sigman, Laura J.

    2003-01-01

    Patent and antitrust laws impact public access to pharmaceuticals and medical technologies. Two instances—one involving Roche’s new class of HIV/AIDS drugs, the other an antitrust action brought against Boston Scientific Corporation for violations of an anticompetitive agreement pertaining to cardiac treatment technology—illustrate the salient effects that medical products can have on public welfare. This paper provides a summary of pat...

  20. Inhibition of Orthopaedic Implant Infections by Immunomodulatory Effects of Host Defense Peptides

    Science.gov (United States)

    2014-12-01

    Foundation for Medical and Pharmaceutical Research (HC), the Cleveland Department of Veterans Affairs (RAB), the Veterans Affairs Merit Review...the Department of Defense, the Mochida Memorial Foundation for Medical and Pharmaceutical Research, the National Institutes of Health, or the Department...Mookherjee N, Brown KL, Bowdish DM, Doria S, Falsafi R, Hokamp K, Roche FM, Mu R, Doho GH, Pistolic J, Powers JP, Bryan J, Brinkman FS, Hancock RE

  1. SS433 Trek 2: light curve analysis.

    Science.gov (United States)

    Fukue, J.; Obana, Y.; Okugami, M.

    The authors have calculated theoretical light curves of SS433 during eclipse and precession, using a model in which SS433 consists of a geometrically thick torus around a compact star and a companion star filling the Roche lobe. The favorite combination is that the mass ratio is about 2 (a compact star is a black hole) and the surface temperature of the companion is around 17000K.

  2. An Optimal Unramified Tower of Function Fields

    DEFF Research Database (Denmark)

    Efficient construction of long AG--codes resulting from optimal towers of function fields is known to be difficult. In the following a tower which is both optimal and unramified, that is a tower in which all places are unramified after some level, is investigated in the hope that its simple ramif...... ramification structure can be exploited in the construction of AG--codes. Results are mostly negative, but helps clarifying the difficulties in computing bases of Riemann--Roch spaces....

  3. An Optimal Unramified Tower of Function Fields

    DEFF Research Database (Denmark)

    Brander, Kristian

    2008-01-01

    Efficient construction of long algebraic geometric--codes resulting from optimal towers of function fields is known to be difficult. In the following a tower which is both optimal and unramified after its third level, is investigated in the hope that its simple ramification structure can be explo...... be exploited in the construction of algebraic geometric--codes. Results are mostly negative, but help clarifying the difficulties in computing bases of Riemann--Roch spaces....

  4. Systemic and Pulmonary Hypertension After Resuscitation with Cell-Free Hemoglobin

    Science.gov (United States)

    1992-07-01

    according to published standards (24). Inorganic phosphate was measured on a blood chemistry analyzer (Cobas-Fara; Roche Diagnostic Systems, Nutley, NJ...alanine aminotransferase (ALT), and lactate dehydrogenase (LDH) on the blood chemistry analyzer . The final 4 ml of blood was heparinized, centrifuged...milliliter of blood was placed in 2 ml of ice-cold perchioric acid (70% wt/vol), which was used to determine whole blood lactate in the blood chemistry

  5. Feasibility Analysis For Heating Tribal Buildings with Biomass

    Energy Technology Data Exchange (ETDEWEB)

    Steve Clairmont; Micky Bourdon; Tom Roche; Colene Frye

    2009-03-03

    This report provides a feasibility study for the heating of Tribal buildings using woody biomass. The study was conducted for the Confederated Salish and Kootenai Tribes of the Flathead Reservation in western Montana. S&K Holding Company and TP Roche Company completed the study and worked together to provide the final report. This project was funded by the DOE's Tribal Energy Program.

  6. Aspects of computer vision in surgical endoscopy

    Science.gov (United States)

    Rodin, Vincent; Ayache, Alain; Berreni, N.

    1993-09-01

    This work is related to a project of medical robotics applied to surgical endoscopy, led in collaboration with Doctor Berreni from the Saint Roch nursing-home in Perpignan, France). After taking what Doctor Berreni advises, two aspects of endoscopic color image processing have been brought out: (1) The help to the diagnosis by the automatic detection of the sick areas after a learning phase. (2) The 3D reconstruction of the analyzed cavity by using a zoom.

  7. ETA INVARIANTS, DIFFERENTIAL CHARACTERS AND FLAT VECTOR BUNDLES

    Institute of Scientific and Technical Information of China (English)

    J.M.BISMUT

    2005-01-01

    The purpose of this paper is to give a refinement of the Atiyah-Singer families index theorem at the level of differential characters. Also a Riemann-Roch-Grothendieck theorem for the direct image of flat vector bundles by proper submersions is proved,with Chern classes with coefficients in C/Q. These results are much related to prior work of Gillet-Soule, Bismut-Lott and Lott.

  8. Equivalencia terapéutica de tabletas de diazepam dispensadas en la ciudad de Ica, Perú.

    OpenAIRE

    Herrera-Calderon, Oscar; Químico Farmacéutico. Facultad de Farmacia y Bioquímica, Universidad Nacional “San Luis Gonzaga”. Ica.; Grande-Ortiz, Miguel; Químico Farmacéutico. Laboratorio de Biodisponibilidad - Bioequivalencia, Centro Nacional de Control de Calidad, Instituto Nacional de Salud. Lima.

    2012-01-01

    Objetivos: Determinar la equivalencia terapéutica in vitro de tres formulaciones de diazepam 10 mg tabletas, paraestablecer su intercambiabilidad con el medicamento de referencia original. Material y métodos: Estudio descriptivo,comparativo, realizado en junio del 2010, utilizando tres medicamentos genéricos dispensados en la ciudad de Ica yel medicamento original de referencia: Diazepam (Valium®) de laboratorios Roche. Se determinaron los perfiles dedisolución efectuados en medios similares ...

  9. Structure Optimization of 21,23-Core-Modified Porphyrins Absorbing Long-Wavelength Light as Potential Photosensitizers Against Breast Cancer Cells

    Science.gov (United States)

    2007-04-01

    4518. 8. You Y, Gibson SL, Hilf R, Davies SR, Oseroff AR, Roy I, Ohulchanskyy TY, Bergey EJ and Detty MR. J. Med. Chem. 2003; 46: 3734- 3747. 9. You...kit and the details followed the instruc- tional manual (Roche Diagnostics, Cat. No. 11 920 685 001) [14]. Cell numbers were determined with the... Bergey , M.R. Detty, Water soluble, core-modi- fied porphyrins. 3. Synthesis, photophysical properties, and in vitro studies of photosensitization

  10. Mid-Infrared Fine-Structure Line Ratios in Active Galactic Nuclei Observed with the Spitzer IRS: Evidence for Extinction by the Torus

    Science.gov (United States)

    2007-07-20

    indicators of the star formation activity in galaxies (e.g., Luhman et al. 2003; Genzel et al. 1998; Roche et al. 1991; Rigopoulou et al. 1999; Clavel et...J. E., & Tielens, A. G. G. M. 2006, ApJ, 637, 774 (CT06) Clavel , J., et al. 2000, A&A, 357, 839 Clegg, R. E. S., Harrington, J. P., Barlow, M. J

  11. Discordance with 3 Cardiac Troponin I and T Assays: Implications for the 99th Percentile Cutoff.

    Science.gov (United States)

    Ungerer, Jacobus Petrus Johannes; Tate, Jillian Russyll; Pretorius, Carel Jacobus

    2016-08-01

    We compared the 99th percentile reference intervals with 3 modern cardiac troponin assays in a single cohort and tested the hypothesis that the same individuals will be identified as above the cutoff and that differences will be explained by analytical imprecision. Blood was collected from 2005 apparently healthy blood donors. Cardiac troponin was measured with Abbott Architect STAT high sensitive troponin I, Beckman Coulter Access AccuTnI+3, and Roche Elecsys troponin T highly sensitive assays. The 99th percentile cutoff limits were as follows: Abbott cardiac troponin I (cTnI) 28.9 ng/L; Beckman Coulter cTnI 31.3 ng/L; and Roche cardiac troponin T (cTnT) 15.9 ng/L. Correlation among the assays was poor: Abbott cTnI vs Beckman Coulter cTnI, R(2) = 0.18; Abbott cTnI vs Roche cTnT, R(2) = 0.04; and Beckman Coulter cTnI vs Roche cTnT R(2) = 0.01. Of the results above the cutoff 50% to 70% were unique to individual assays, with only 4 out of 20 individuals above the cutoff for all 3 assays. The observed differences among assays were larger than predicted from analytical imprecision. The 99th percentile cutoff values were in agreement with those reported elsewhere. The poor correlation and concordance amongst the assays were notable. The differences found could not be explained by analytical imprecision and indicate the presence of inaccuracy (bias) that is unique to sample and assay combinations. Based on these findings we recommend less emphasis on the cutoff value and greater emphasis on δ values in the diagnosis of myocardial infarction. © 2016 American Association for Clinical Chemistry.

  12. Introductory note on Emergent Unconscious Knowledge Networks (Asygnodic Networks

    Directory of Open Access Journals (Sweden)

    Henry Bakis

    2016-05-01

    Full Text Available This note introduces the following paper on the concept of Emergent Unconscious Knowledge Networks (Asygnodic Networks created by E. Roche and M. Blaine. The concept of asyngnosis explains a large number of diverse phenomena involving organizations, groups and decision making. It will present the genesis and definition of Asygnodic Networks and will focus on how they raise challenges to traditional theories of decision making and emerging social networks.

  13. Advances in enzyme immobilisation

    CSIR Research Space (South Africa)

    Brady, D

    2009-07-10

    Full Text Available , with negligible shrinkage) (Pierre 2004). Santos et al. (2008a, 2008b) have investigated polysiloxane (POS)-polyvinyl alcohol (PVA) hybrid matrices for Candida antarctica lipase B (CaL-B) immobilisation, and demonstrated that the percentage of PVA in the sol... of lipases for use in organic solvents, such as commercial preparations of immobilised Candida antarctica lipase B (CaL-B), which include Novozyme 435 (Novozymes) and Chirazyme (Roche Molecular Biochemicals). Macroporus acrylic polymer resins...

  14. X-ray variability and evidence for pulsations from the unique radio pulsar/X-ray binary transition object FIRST J102347.6+003841

    NARCIS (Netherlands)

    Archibald, A.M.; Kaspi, V.M.; Bogdanov, S.; Hessels, J.W.T.; Stairs, I.H.; Ransom, S.M.; McLaughlin, M.A.

    2010-01-01

    We report on observations of the unusual neutron-star binary system FIRST J102347.6+003841 carried out using the XMM-Newton satellite. This system consists of a radio millisecond pulsar (PSR J1023+0038) in a 0.198 day orbit with a ~0.2 M sun Roche-lobe-filling companion and appears to have had an ac

  15. Effet Hall quantique, liquides de Luttinger et charges fractionnaires

    Science.gov (United States)

    Roche, Patrice; Rodriguez, V.; Glattli, D. Christian

    We review some basic properties of the Fractional Quantum Hall Effect and particularly address the physics of the edge states. The chiral Luttinger liquid properties of the edges are discussed and probed experimentally using transport measurements. Shot noise measurements, which allow determination of the quasiparticle charge are also discussed. To cite this article: P. Roche et al., C. R. Physique 3 (2002) 717-732.

  16. Mikroskopische Studien ueber Gesteine aus den Molukken. 1. Gesteine von Ambon und den Uliassern. Mit einem französischen Résumé

    NARCIS (Netherlands)

    Schroeder van der Kolk, J.L.C.

    1888-01-01

    Dans le traité précédent j’ai décrit les types les plus caractéristiques parmi les échantillons de roche recueillis par M. MARTIN pendant ses voyages dans les Moluques. Ainsi il s’agit des Granites à biotite, des Péridotites, des Dacites, des Andésites à pyroxène, des Brèches volcaniques et aussi de

  17. Functional Analysis of the Beclin-1 Tumor Suppressor Interaction With hVps34 (Type-III P13-Kinase) in Breast Cancer Cells

    Science.gov (United States)

    2006-06-01

    1% Nonidet P40 , 0.5% sodium deoxycholate, 0.1% SDS, 5 mM EDTA. Insoluble material was removed by centrifugation at 100,000 g for 45 minutes at 4°C...7.4, 2 mM EDTA, 0.5% Nonidet P-40, 0.1% SDS, 0.5% sodium deoxycholate) supplemented with complete mini protease inhibitors (Roche). Insoluble material

  18. Note sur deux espèces de Lepidocyclina des Indes Néerlandaises

    NARCIS (Netherlands)

    Schlumberger, C.

    1899-01-01

    Je dois à l’obligeance de Monsieur K. MARTIN professeur de Géologie à l’Université de Leiden l’envoi pour ma collection de foraminifères de quelques doubles des roches rapportées de Java par Monsieur VERBEEK et j’ai eu la bonne fortune d’y rencontrer deux espèces d’Orbitoïdes du sous-genre

  19. Note sur un Lepidocyclina nouveau de Bornéo

    NARCIS (Netherlands)

    Schlumberger, C.

    1899-01-01

    Les travaux des géologues hollandais et de quelques savants anglais nous ont déjà fait connaître un bon nombre de foraminifères fossiles de Java et de Borneo, mais il reste encore à glaner après eux. Je viens de trouver dans une roche calcaire de Borneo que Mons. MARTIN, professeur à Leiden, a bien

  20. Exoplanet recycling in massive white-dwarf debris discs

    Science.gov (United States)

    Van Lieshout, Rik

    2017-06-01

    When a star evolves into a white dwarf, the planetary system it hosts can become unstable. Planets in such systems may then be scattered onto star-grazing orbits, leading to their tidal disruption as they pass within the white dwarf’s Roche limit. We study the massive, compact debris discs that may arrise from this process using a combination of analytical estimates and numerical modelling. The discs are gravitationally unstable, resulting in an enhanced effective viscosity due to angular momentum transport associated with self-gravity wakes. For disc masses greater than ~1026 g (corresponding to progenitor objects comparable to the Galilean moons), viscous spreading dominates over Poynting-Robertson drag in the outer parts of the disc. In such massive discs, mass is transported both in- and outwards. When the outward-flowing material spreads beyond the Roche limit, it coagulates into new (minor) planets in a process analogous to the ongoing formation of Saturn’s innermost moonlets. This process recycles a substantial fraction of the original disc mass (tens of percents), with the bulk of the mass locked in a single large body orbitting in a 2:1 mean-motion resonance with the Roche limit. As such, the recycling of a tidally disrupted super-Earth could yield an Earth-mass planet on a 10--20 hr orbit. For white dwarfs with a temperature below 6000-7000 K (corresponding to a cooling age of >1--2 Gyr), this orbit is located in the white dwarf’s habitable zone. The recycling process also creates a string of smaller bodies just outside the Roche limit. These may account for the collection of minor planets postulated to orbit white dwarf WD 1145+017.