Sipman, H.J.M.; Cleef, A.M.
Morphology, chemistry, distribution and ecology of 6 species of Cladonia subgenus Cladina (Lichenes) from the Colombian paramos are described: C. arcuata Ahti, C. boliviano Ahti, C. confusa Sant., C. polia Sant., C. rangiferina (L.) Wigg. var. abbayesii Ahti, and C. colombiana spec. Nov. C. bicolor
Marques, João Carlos; Bellan-Santini, Denise
Amphipods from the Portuguese south and south-western continental shelf were studied with regard to the species inventory, distribution, and ecology. This study allowed the identification of 113 species, belonging to 52 genera; of these species 28 are recorded for the first time along the Portuguese
DARWIN M. MORALES-MARTÍNEZ
Full Text Available In order to clarify the distribution of bats of the genus Lasiurus in Colombia, we performed a morphological study of 49 specimens from four Colombian collections. Our review confirms the presence of three species in Colombia (L. blossevillii, L. cinereus, and L. ega with distribution in all natural regions that include six of the nine biogeographic provinces. These species can be easily differentiated based on external and cranial characters. Lasiurus cinereus is the largest species (forearm length > 52 mm and L. blossevillii is the smallest (forearm < 42 mm; L. ega has a distinctive skull shape with a developed sagittal crest. While previous literature make claims that L. egregius and L. castaneus occur in Colombia, our analysis found no support for this and even contradicts the evidence cited for their presence in the country. We demonstrate that one specimen attributed to L. egregius in literature corresponds to a misidentified L. blossevillii. Furthermore, we found that there are not any specimens of L. castaneus from the Department of Cundinamarca despite several reports in the literature. The status of subspecies in Colombia remains controversial and more specimens are needed to determine whether there are clear distinctions between forms in any geographical region. Most of the specimens examined were males and in some cases, were collected opportunistically from dead individuals found in cities in the Andean region.
Buccella, Agustina; Cechich, Alejandra; Pol`la, Matias; Arias, Maximiliano; del Socorro Doldan, Maria; Morsan, Enrique
Nowadays, reusing software applications encourages researchers and industrials to collaborate in order to increase software quality and to reduce software development costs. However, effective reuse is not easy and only a limited portion of reusable models actually offers effective evidence regarding their appropriateness, usability and/or effectiveness. Focusing reuse on a particular domain, such as marine ecology, allows us to narrow the scope; and along with a systematic approach such as software product line development, helps us to potentially improving reuse. From our experiences developing a subdomain-oriented software product line (SPL for the marine ecology subdomain), in this paper we describe semantic resources created for assisting this development and thus promoting systematic software reuse. The main contributions of our work are focused on the definition of a standard conceptual model for marine ecology applications together with a set of services and guides which assist the process of product derivation. The services are structured in a service taxonomy (as a specialization of the ISO 19119 std) in which we create a new set of categories and services built over a conceptual model for marine ecology applications. We also define and exemplify a set of guides for composing the services of the taxonomy in order to fulfill different functionalities of particular systems in the subdomain.
Elena M Krylova
Full Text Available Vesicomyid bivalves are a consistent component of communities of sulphide-rich reducing environments distributed worldwide from 77 degrees N to 70 degrees S at depths from 100 to 9050 m. Up-to-now the taxonomy of the family has been uncertain. In this paper, the current state of vesicomyid taxonomy and distribution at the generic rank are considered. This survey is founded on a database including information both from literature sources and also unpublished data of the authors on all recent species of vesicomyids. We suggest that the Vesicomyidae is not a synonym of Kelliellidae, and is therefore a valid family name. We propose to divide the family Vesicomyidae into two subfamilies: Vesicomyinae and Pliocardiinae. The Vesicomyinae includes one genus, Vesicomya, which comprises small-sized bivalves characterized by non-reduced gut and the absence of subfilamental tissue in gills. Symbiosis with chemoautotrophic bacteria has, so far, not been proved for Vesicomya and the genus is not restricted to sulphide-rich reducing habitats. The subfamily Pliocardiinae currently contains about 15 genera with mostly medium or large body size, characterized by the presence of subfilamental tissue in the gills. The Pliocardiinae are highly specialized for sulphide-rich reducing environments, harbouring chemoautrophic bacteria in their gills. This is the first summary of the generic structure of the family Vesicomyidae that allow us to analyze the distribution of vesicomyids at the generic level. We recognize here five different distribution patterns that are related to the specific environmental demands. The general trends in the distribution patterns of the vesicomyids are an occurrence of the majority of genera in broad geographical ranges and the prevalence of near continental type of distribution.
Kulendra Chandra Das
Full Text Available India is home to five species of tortoises of which the two endangered species are found in northeastern India. We report for first time new distributional records of Indotestudo elongata and additional site records of Manouria emys phayrei from 17 different locations in the Barak Valley region of Assam.
Kulendra Chandra Das; Abhik Gupta
India is home to five species of tortoises of which the two endangered species are found in northeastern India. We report for first time new distributional records of Indotestudo elongata and additional site records of Manouria emys phayrei from 17 different locations in the Barak Valley region of Assam.
Meghini, Carlo; Coltella, Veronica; Analyti, Anastasia
We address the problem of answering queries over a distributed information system, storing objects indexed by terms organized in a taxonomy. The taxonomy consists of subsumption relationships between negation-free DNF formulas on terms and negation-free conjunctions of terms. In the first part of the paper, we consider the centralized case, deriving a hypergraph-based algorithm that is efficient in data complexity. In the second part of the paper, we consider the distributed case, presenting alternative ways implementing the centralized algorithm. These ways descend from two basic criteria: direct vs. query re-writing evaluation, and centralized vs. distributed data or taxonomy allocation. Combinations of these criteria allow to cover a wide spectrum of architectures, ranging from client-server to peer-to-peer. We evaluate the performance of the various architectures by simulation on a network with O(10^4) nodes, and derive final results. An extensive review of the relevant literature is finally included.
Full Text Available Thirty seven species of locusts and grasshoppers representing 26 genera, four tribes and 12 subfamilies belonging to the families Pyrgomorphidae, Catantopidae and Acrididae are reported from different localities of Bihar. Their distinguishing characters and bio-ecological data are provided along with keys to tribes and subfamilies. This paper comprising of distribution and field observation along with taxonomy of Acridoid fauna is the first of its kind from the state.
Amini Rad, M.; Hroudová, Zdenka; Marhold, K.
Roč. 28, č. 5 (2010), s. 588-602. ISSN 0107-055X R&D Projects: GA AV ČR IAA6005905 Institutional research plan: CEZ:AV0Z60050516 Keywords : Bolboschoenus * taxonomy, distribution, polyploidy * inflorescence structure Subject RIV: EF - Botanics Impact factor: 0.761, year: 2010
Full Text Available Orobanche flava is a species of Central European mountain ranges, mainly the Alps and Carpathian Mts. The paper presents the current distribution of O. flava in Poland based on a critical revision of herbarium and literature data as well as results of field investigations conducted between 1999 and 2014. The distribution of species is centered in southern Poland, mainly in the Carpathian Mts., and, sporadically, in the Sudeten Mts. The distribution of O. flava in Poland is mapped. The taxonomy, biology, and ecology are also discussed.
Full Text Available The paper presents the current distribution of Orobanche caryophyllacea Sm. in Poland based on a critical revision of herbarium and literature data as well as the results of my field studies. The majority of localities are in south and south-eastern Poland: Małopolska Upland, Lublin Upland, Roztocze, Przemyśl Foothills, Pieniny Mts, rarely in the valleys of the Lower Vistula and Oder rivers or Wolin island. The distribution map in Poland is included. The taxonomy, biology and ecology of the species are discussed.
Full Text Available Abstract Background The distribution of isoelectric point (pI of proteins in a proteome is universal for all organisms. It is bimodal dividing the proteome into two sets of acidic and basic proteins. Different species however have different abundance of acidic and basic proteins that may be correlated with taxonomy, subcellular localization, ecological niche of organisms and proteome size. Results We have analysed 1784 proteomes encoded by chromosomes of Archaea, Bacteria, Eukaryota, and also mitochondria, plastids, prokaryotic plasmids, phages and viruses. We have found significant correlation in more than 95% of proteomes between the protein length and pI in proteomes – positive for acidic proteins and negative for the basic ones. Plastids, viruses and plasmids encode more basic proteomes while chromosomes of Archaea, Bacteria, Eukaryota, mitochondria and phages more acidic ones. Mitochondrial proteomes of Viridiplantae, Protista and Fungi are more basic than Metazoa. It results from the presence of basic proteins in the former proteomes and their absence from the latter ones and is related with reduction of metazoan genomes. Significant correlation was found between the pI bias of proteomes encoded by prokaryotic chromosomes and proteomes encoded by plasmids but there is no correlation between eukaryotic nuclear-coded proteomes and proteomes encoded by organelles. Detailed analyses of prokaryotic proteomes showed significant relationships between pI distribution and habitat, relation to the host cell and salinity of the environment, but no significant correlation with oxygen and temperature requirements. The salinity is positively correlated with acidicity of proteomes. Host-associated organisms and especially intracellular species have more basic proteomes than free-living ones. The higher rate of mutations accumulation in the intracellular parasites and endosymbionts is responsible for the basicity of their tiny proteomes that explains
Abler, Steven W.
Leptosphaerulina spp. are common fungi that have been reported to colonize several turfgrass species. Controversy exists regarding the relationship of Leptosphaerulina spp. and their turfgrass hosts. The fungus has been classified as a saprophyte, senectophyte, weak pathogen, and pathogen of turfgrasses. There has also been conflicting reports regarding the delineation of species within the genus Leptosphaerulina. Because of the uncertainty regarding the ecology and taxonomy of the genus i...
Armenteros Almanza, M.
Present thesis focuses on ecology of assemblages and taxonomy of free-living marine nematodes. Most of the data are from Cienfuegos, a semi-enclosed bay in the Caribbean Sea; but, we also provided data on biodiversity from other areas in Cuban marine waters. Four main topics are included: description of biodiversity patterns, a microcosm experiment about effects of organic enrichment on assemblages, a taxonomic revision of the genus Terschellingia de Man, 1888, and the description of four new...
Along the North-East Atlantic, the genus Cystoseira (brown algae, family Sargassaceae) is composed of five species, and their populations settle in rock pools from the intertidal zone. Beyond the ecological value of these organisms, they are now more and more studied as a source of natural products. However, taxonomical issues within this genus must be solved first. So, we investigated the taxonomy of the five species occurring in Brittany using two strategies: phylogenetic analyses (thanks t...
Witte, F.; Oijen, van M.J.P
Based on ecological and morphological features, the 300 or more haplochromine cichlid species of Lake Victoria are classified into fifteen (sub)trophic groups. A key to the trophic groups, mainly based on external morphological characters, is presented. Of each trophic group a description is given c
Full Text Available The paper presents current distribution of Orobanche lutea Baumg. in Poland based on a critical revision of herbarium and literature data as well as results of field investigations conducted between 1999-2014. Majority of localities are centred around the Silesia-Cracow, Małopolska and Lublin-Lviv Uplands. The greatest density of sites with probably the most abundant populations in Europe is in the central part of Silesia-Cracow Upland, which, by several hundred years, was heavily exploited for calamine mining (rich in zinc, lead and silver. This resulted in the formation of large areas of gangue containing toxic heavy metals. Since limestone, dolomite, marl and postglacial calcareous clay and sands occur there in most places, the soil is often strongly calcareous. Populations of O. lutea contain here many thousands of shoots. The distribution of the species in Poland is mapped. The taxonomy, biology, ecology and threats are also discussed.
Full Text Available The distributed environments vary largely in their architectures, from tightly coupled cluster environment to loosely coupled Grid environment and completely uncoupled peer-to-peer environment, and thus differ in their working environments as well as performance. To meet the specific needs of these environments for data organization, replication, transfer, scheduling etc. the data management systems implement different data management models. In this paper, major data management tasks in distributed environments are identified and a taxonomy of the data management models in these environments is presented. The taxonomy is used to highlight the specific data management requirements of each environment and highlight the strengths and weakness of the implemented data management models. The taxonomy is followed by a survey of different distributed and Grid environments and the data management models they implement. The taxonomy and the survey results are used to identify the issues and challenges of data management for future exploration.
Full Text Available Species of the genus Orobanche (Orobanchaceae, parasitic on Centaurea in Central Europe, were previously considered to belong to the O. elatior group. At present, the taxon is differentiated into two species, O. elatior Sutton and O. kochii F.W. Schultz. The paper presents for the first time the distribution of O. elatior and O. kochii in Poland based on a critical revision of herbarium and the literature data, as well as the results of field studies conducted between 1999 and 2014. The majority of the species’ localities are in south Poland: Silesia-Cracow, Małopolska and the Lublin Uplands. The distribution of both species in Poland is mapped and chronologically organized, and is thus the most recent in Europe. The taxonomy, host preferences, and ecology are also discussed. Seeds of both species were also investigated using light and scanning electron microscopy, which resulted in the designation of diagnostic features. The new color form of O. kochii f. citrina is described and illustrated. An account of all revised herbarium specimens collected from Poland, deposited in Poland and neighboring countries, is presented.
Ekesi, Sunday; De Meyer, Marc; Mohamed, Samira A; Virgilio, Massimiliano; Borgemeister, Christian
Horticulture is one of the most important agricultural subsectors in Africa, providing income, creating employment opportunities, and enhancing food and nutritional security. However, tephritid fruit flies are responsible for both direct and indirect losses, with alien invasive species often having the most severe ecological and economic impact. In the past 20 years, systematic analysis of tephritids has provided comparative information on taxonomy, synonymy, and character-state differentiation. New molecular techniques are now available for identifying species, reconstructing phylogenies, and studying population genetic structures. Research on biology, host range and shifts, thermotolerance, and demography has provided useful information for developing predictive and ecological niche models to guide management methods. In recent years, the responses of various species to attractants have been documented. Several suppression methods, including the release of coevolved parasitoid species targeting invasives, have been promoted within the context of integrated pest management, leading to improvement in the quality and quantity of fruits and vegetables produced. However, there is still the need for wide-scale availability of these technologies to smallholder growers across Africa. PMID:26735644
Foudriat, E. C.
Characteristics of the resource structure found in the operating system are considered as a mechanism for classifying distributed computer systems. Since the operating system resources, themselves, are too diversified to provide a consistent classification, the structure upon which resources are built and shared are examined. The location and control character of this indivisibility provides the taxonomy for separating uniprocessors, computer networks, network computers (fully distributed processing systems or decentralized computers) and algorithm and/or data control multiprocessors. The taxonomy is important because it divides machines into a classification that is relevant or important to the client and not the hardware architect. It also defines the character of the kernel O/S structure needed for future computer systems. What constitutes an operating system for a fully distributed processor is discussed in detail.
Taxonomy and distribution pattern of the African rain forest butterfly genus Euphaedra Hübner sensu stricto with the description of three new subspecies of Euphaedra cyparissa (Cramer and one of E. sarcoptera (Butler (Lepidoptera, Nymphalidae, Limenitidinae, Adoliadini
Full Text Available Updated data on the distribution, ecology and taxonomy of Euphaedra cyparissa (Cramer and Euphaedra sarcoptera (Butler are presented. Three new subspecies of E. cyparissa and one of E. sarcoptera are described and their geographic distribution is presented. The monophyly of the genus Euphaedra sensu Hecq is assessed based on morphological, in particular male and female genitalia, and behavioural traits. Possible evolutionary reasons for the convergence of colour pattern between the sympatric subspecies of E. cyparissa and E. sarcoptera are discussed.
Barbod SAFAEI-MAHROO; Reza NASRABADI; Mehdi RAJABIZADEH; Meysam MASHAYEKHI; Alireza MOTESHAREI; Alireza NADERI; Seyed Mahdi KAZEMI; Hanyeh GHAFFARI; Hadi FAHIMI; Siamak BROOMAND; Mahtab YAZDANIAN; Elnaz NAJAFI MAJD; Elham REZAZADEH; Mahboubeh Sadat HOSSEINZADEH
We present an annotated checklist for a total 241 reptiles and 22 amphibians including 5 frogs, 9 toads, 7 newts and salamanders, 1 crocodile, 1 worm lizard, 148 lizards, 79 snakes and 12 turtles and tortoises, includes the most scientific literature up to August 2014 and also based on several field surveys conducted in different Provinces of Iran from 2009 to 2014. We present an up-to-dated checklist of reptiles and amphibians in Iran. We provide a comprehensive listing of taxonomy, names, distribution and conservation status of all amphibians and reptiles of Iran. This checklist includes all recognized named taxa, English names for classes, orders, families, species, subspecies along with Persian names for species, including indication of native and introduced species. For the first time we report two non-native introduced reptiles from natural habitats of Iran. Of the total 22 species of amphibians in Iran, 6 (27.2%) are endemic and of the total 241 species of reptiles, 55 (22.8%) are endemic. Of the 22 amphibians species in Iran, 3 (13%) are Critically Endangered, 2 (9%) are Vulnerable and of the 241 reptile species 3 (1.2%) are Critically Endangered, 4 (1.6%) are Endangered and 10 (4.1%) are Vulnerable. Accordingly, this paper combines significant aspects of taxonomy, common names, conservation status and distribution of the Iranian herpetofauna.
Koppel, Jonathan Mark
the bump, with a number of alternative age distributions seen in the literature. Therefore, I present a taxonomy of these alternative age distributions. Lastly, I discuss the implications of the existing literature regarding the mechanisms underlying the bump and offer suggestions for future research....
Knapp, Jenny; Gottstein, Bruno; Saarma, Urmas; Millon, Laurence
Alveolar echinococcosis, caused by the tapeworm Echinococcus multilocularis, is one of the most severe parasitic diseases in humans and represents one of the 17 neglected diseases prioritised by the World Health Organisation (WHO) in 2012. Considering the major medical and veterinary importance of this parasite, the phylogeny of the genus Echinococcus is of considerable importance; yet, despite numerous efforts with both mitochondrial and nuclear data, it has remained unresolved. The genus is clearly complex, and this is one of the reasons for the incomplete understanding of its taxonomy. Although taxonomic studies have recognised E. multilocularis as a separate entity from the Echinococcus granulosus complex and other members of the genus, it would be premature to draw firm conclusions about the taxonomy of the genus before the phylogeny of the whole genus is fully resolved. The recent sequencing of E. multilocularis and E. granulosus genomes opens new possibilities for performing in-depth phylogenetic analyses. In addition, whole genome data provide the possibility of inferring phylogenies based on a large number of functional genes, i.e. genes that trace the evolutionary history of adaptation in E. multilocularis and other members of the genus. Moreover, genomic data open new avenues for studying the molecular epidemiology of E. multilocularis: genotyping studies with larger panels of genetic markers allow the genetic diversity and spatial dynamics of parasites to be evaluated with greater precision. There is an urgent need for international coordination of genotyping of E. multilocularis isolates from animals and human patients. This could be fundamental for a better understanding of the transmission of alveolar echinococcosis and for designing efficient healthcare strategies. PMID:26260408
Giuffrida, Rosalba; Dittrich, Yvonne
In this position paper, we discuss about methods currently adopted for research- ing the use of social media in distributed workplace. We have extensively reviewed previ- ous empirical studies through an ongoing Systematic Mapping Study focused on the use of social media in distributed teams; from...... the review, we realized that research is mainly per- formed through a mix of qualitative and quantitative methods and that each study usually fo- cuses on one specific kind social media at a time. We believe that the social media ecology should be researched as a whole and in relationship with the physical...
Sarah J Higginbotham
Full Text Available Fungal endophytes--fungi that grow within plant tissues without causing immediate signs of disease--are abundant and diverse producers of bioactive secondary metabolites. Endophytes associated with leaves of tropical plants are an especially exciting and relatively untapped source of novel compounds. However, one major challenge in drug discovery lies in developing strategies to efficiently recover highly bioactive strains. As part of a 15-year drug discovery project, foliar endophytes were isolated from 3198 plant samples (51 orders, 105 families and at least 232 genera of angiosperms and ferns collected in nine geographically distinct regions of Panama. Extracts from culture supernatants of >2700 isolates were tested for bioactivity (in vitro percent inhibition of growth, % IG against a human breast cancer cell line (MCF-7 and the causative agents of malaria, leishmaniasis, and Chagas' disease. Overall, 32.7% of endophyte isolates were highly active in at least one bioassay, including representatives of diverse fungal lineages, host lineages, and collection sites. Up to 17% of isolates tested per assay were highly active. Most bioactive strains were active in only one assay. Fungal lineages differed in the incidence and degree of bioactivity, as did fungi from particular plant taxa, and greater bioactivity was observed in endophytes isolated from plants in cloud forests vs. lowland forests. Our results suggest that using host taxonomy and forest type to tailor plant collections, and selecting endophytes from specific orders or families for cultivation, will markedly increase the efficiency and efficacy of discovering bioactive metabolites for particular pharmaceutical targets.
Komárek, O.; Komárek, Jiří
Roč. 123, - (2001), s. 121-140. ISSN 1438-9134. [International conference: Algae and extreme environments. Třeboň, 11.09.2000-16.09.2000] R&D Projects: GA AV ČR KSK6005114; GA AV ČR IAA6005002 Institutional research plan: CEZ:AV0Z6005908 Keywords : Cryoseston * green algae * cyanobacteria * ecology * seasonality * taxonomy * Antarctica Subject RIV: EA - Cell Biology Impact factor: 0.488, year: 2000
Eichlerová, Ivana; Homolka, Ladislav; Žifčáková, Lucia; Lisá, Ludmila; Dobiášová, Petra; Baldrian, Petr
Roč. 13, č. 1 (2015), s. 10-22. ISSN 1754-5048 R&D Projects: GA ČR GAP504/12/0709; GA ČR GA13-06763S Institutional support: RVO:61388971 Keywords : Basidiomyceta * Decomposition * Ecology Subject RIV: EE - Microbiology, Virology Impact factor: 2.929, year: 2014
Notes on the geographic distribution and subspecific taxonomy of Sais rosalia (Cramer) (Lepidoptera, Nymphalidae, Ithomiini), including the first records in Paraguay. This paper provides comments on the subspecific taxonomy and geographic distribution of Sais rosalia (Cramer, 1779) (Lepidoptera, Nymphalidae, Ithomiini), as well as an up-to-date distributional map, complemented with unpublished distributional data based on specimens deposited in the Coleção Entomológica Pe. Jesus S. Moure, Cur...
Distribution profiles of trace elements in land plants were studied by neutron activation analysis and radioactivity measurements without activation. Number of botanical samples analyzed were more than three thousand in which more than three hundred botanical species were included. New accumulator plants of Co, Cr, Zn, Cd, rare earth elements, Ac, U, etc., were found. Capabilities of accumulating trace elements can be related to the botanical taxonomy. Discussions are given from view points of inorganic chemistry as well as from botanical physiology
Full Text Available mphii_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cycas+rumphii&t=L http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Cycas+rumphii&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cycas+rumphii&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cycas+rumphii&t=NS ...
Species of the genus Pontonia Latreille, 1829, are distributed in tropical and subtropical waters around the world, living in association with either molluscan or ascidian hosts. In the present taxonomic revision, Pontonia sensu lato is divided into six genera: Pontonia sensu stricto; Ascidonia gen. nov., Rostronia gen. nov., Dactylonia gen. nov., Odontonia gen. nov., and Bruceonia gen. nov. A total of 29 species is described and figured, four of which are new to science: Pontonia pilosa spec...
Hayes, Mark A.
White-nose syndrome (WNS) is a devastating disease affecting hibernating bats, first documented in winter 2006 in eastern North America. Over 5.5 million bats of several species may have died as a result of this disease. The fungus Geomyces destructans is now considered the causal agent of WNS, and this species may have been recently introduced into North American bat hibernation habitats. This overview summarizes the ecology and distribution of Geomyces fungi. Species in this genus are common in the soils of temperate and high-latitude ecosystems and are capable of withstanding and thriving in cold, low-nutrient polar environments. These species are dispersed by wind, groundwater, arthropods, birds, and mammals and are carried by humans, their clothing, and their equipment. These characteristics present significant challenges to biologists, managers, and others charged with controlling the spread of WNS and G. destructans in other parts of North America and the biosphere.
Tholen, David J.; Barucci, M. Antonietta
The spectral reflectivity of asteroid surfaces over the wavelength range of 0.3 to 1.1 micron can be used to classify these objects into several broad groups with similar spectral characteristics. The three most recently developed taxonomies group the asteroids into 9, 11, or 14 different clases, depending on the technique used to perform the analysis. The distribution of the taxonomic classes shows that darker and redder objects become more dominant at larger heliocentric distances, while the rare asteroid types are found more frequently among the small objects of the planet-crossing population.
D. Johan Kotze
Full Text Available ‘Carabidologists do it all’ (Niemelä 1996a is a phrase with which most European carabidologists are familiar. Indeed, during the last half a century, professional and amateur entomologists have contributed enormously to our understanding of the basic biology of carabid beetles. The success of the field is in no small part due to regular European Carabidologists’ Meetings, which started in 1969 in Wijster, the Netherlands, with the 14th meeting again held in the Netherlands in 2009, celebrating the 40th anniversary of the first meeting and 50 years of long-term research in the Dwingelderveld. This paper offers a subjective summary of some of the major developments in carabidology since the 1960s. Taxonomy of the family Carabidae is now reasonably established, and the application of modern taxonomic tools has brought up several surprises like elsewhere in the animal kingdom. Progress has been made on the ultimate and proximate factors of seasonality and timing of reproduction, which only exceptionally show non-seasonality. Triggers can be linked to evolutionary events and plausibly explained by the “taxon cycle” theory. Fairly little is still known about certain feeding preferences, including granivory and ants, as well as unique life history strategies, such as ectoparasitism and predation on higher taxa. The study of carabids has been instrumental in developing metapopulation theory (even if it was termed differently. Dispersal is one of the areas intensively studied, and results show an intricate interaction between walking and flying as the major mechanisms. The ecological study of carabids is still hampered by some unresolved questions about sampling and data evaluation. It is recognised that knowledge is uneven, especially concerning larvae and species in tropical areas. By their abundance and wide distribution, carabid beetles can be useful in population studies, bioindication, conservation biology and landscape ecology. Indeed
Inger, Robert F.
For some strange reason the attitudes of taxonomists and systematists towards the phrase "numerical taxonomy" fall into two extreme positions. On the one hand are those who think numerical taxonomy provides the only means of reaching objective conclusions, that any other approach to taxonomy is sterile, subjective, and really not quite scientific. At the other extreme are those taxonomists who think numerical taxonomy has no place in their science, that it is unclean or is likely to be ...
Full Text Available Caenorhabditis elegans Nematoda Caenorhabditis_elegans_L.png Caenorhabditis_elegans..._NL.png Caenorhabditis_elegans_S.png Caenorhabditis_elegans_NS.png http://biosciencedbc.jp/taxonomy_icon/ico...n.cgi?i=Caenorhabditis+elegans&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Caenorhabditis+elegans&t...=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Caenorhabditis+elegans&t=S h...ttp://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Caenorhabditis+elegans&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=94 ...
Full Text Available Tyrannosaurus rex Chordata/Vertebrata/Reptilia/Dinosauria,Pterosauromorpha Tyrannosaurus_rex..._L.png Tyrannosaurus_rex_NL.png Tyrannosaurus_rex_S.png Tyrannosaurus_rex_NS.png http://bioscienced...bc.jp/taxonomy_icon/icon.cgi?i=Tyrannosaurus+rex&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tyrannosaurus+rex...&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tyrannosaurus+rex...&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tyrannosaurus+rex&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=109 ...
Strona, Giovanni; Palomares, Maria Lourdes D.; Bailly, Nicholas; Galli, Paolo; Lafferty, Kevin D.
Our data set includes 38 008 fish parasite records (for Acanthocephala, Cestoda, Monogenea, Nematoda, Trematoda) compiled from the scientific literature, Internet databases, and museum collections paired to the corresponding host ecological, biogeographical, and phylogenetic traits (maximum length, growth rate, life span, age at maturity, trophic level, habitat preference, geographical range size, taxonomy). The data focus on host features, because specific parasite traits are not consistently available across records. For this reason, the data set is intended as a flexible resource able to extend the principles of ecological niche modeling to the host–parasite system, providing researchers with the data to model parasite niches based on their distribution in host species and the associated host features. In this sense, the database offers a framework for testing general ecological, biogeographical, and phylogenetic hypotheses based on the identification of hosts as parasite habitat. Potential applications of the data set are, for example, the investigation of species–area relationships or the taxonomic distribution of host-specificity. The provided host–parasite list is that currently used by Fish Parasite Ecology Software Tool (FishPEST, http://purl.oclc.org/fishpest), which is a website that allows researchers to model several aspects of the relationships between fish parasites and their hosts. The database is intended for researchers who wish to have more freedom to analyze the database than currently possible with FishPEST. However, for readers who have not seen FishPEST, we recommend using this as a starting point for interacting with the database.
Soil protists occupy key nodes in soil food webs due to their high abundance, fast turnover and functional importance as bacterial grazers. However, methodological drawbacks obscure the knowledge of soil protists, so that many taxa remain unknown. The structure of natural protist communities and taxa-specific ecological functions are also largely unknown. This thesis aims to increase the knowledge on soil protists using a variety of approaches. In the first part, naked amoebae being pres...
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Full Text Available Amborella trichopoda Amborella_trichopoda_L.png Amborella_trichopoda_NL.png Amborella_trichopoda..._S.png Amborella_trichopoda_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Amborella+trichopoda...&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Amborella+trichopoda&t=NL http://biosciencedb...c.jp/taxonomy_icon/icon.cgi?i=Amborella+trichopoda&t=S http://biosciencedbc.jp/ta...xonomy_icon/icon.cgi?i=Amborella+trichopoda&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=13 ...
Full Text Available Algological investigations were focused on taxonomy, chorology and ecology of threatened filamentous green alga species in Poland. Studies on Oedogonium capillare Kützing ex Hirn growing in large quantities in association with Cladophora rivularis (Linnaeus Hoek in pond were conducted. The aim of these studies was to describe the distribution, ecology and morphology of O. capillare as part of a more comprehensive study of this filamentous green alga. It is the eighth record in Poland for O. capillare. Filaments of O. capillare were grown over a wide pH range (7.3-9.6 and in high variability of nutrients. Vegetative cells, oogonia and antheridia were observed, which allowed taxonomic identification. O. capillare occurs in eutrophic waters which requires protection of its habitat.
Full Text Available Copepoda is one of the most prominent higher taxa with almost 80 described species at deep-sea hydrothermal vents. The unique copepod family Dirivultidae with currently 50 described species is the most species rich invertebrate family at hydrothermal vents.We reviewed the literature of Dirivultidae and provide a complete key to species, and map geographical and habitat specific distribution. In addition we discuss the ecology and origin of this family.Dirivultidae are only present at deep-sea hydrothermal vents and along the axial summit trough of midocean ridges, with the exception of Dirivultus dentaneus found associated with Lamellibrachia species at 1125 m depth off southern California. To our current knowledge Dirivultidae are unknown from shallow-water vents, seeps, whale falls, and wood falls. They are a prominent part of all communities at vents and in certain habitat types (like sulfide chimneys colonized by pompei worms they are the most abundant animals. They are free-living on hard substrate, mostly found in aggregations of various foundation species (e.g. alvinellids, vestimentiferans, and bivalves. Most dirivultid species colonize more than one habitat type. Dirivultids have a world-wide distribution, but most genera and species are endemic to a single biogeographic region. Their origin is unclear yet, but immigration from other deep-sea chemosynthetic habitats (stepping stone hypothesis or from the deep-sea sediments seems unlikely, since Dirivultidae are unknown from these environments. Dirivultidae is the most species rich family and thus can be considered the most successful taxon at deep-sea vents.
Sergio D. Ríos Díaz
Full Text Available Notes on the geographic distribution and subspecific taxonomy of Sais rosalia (Cramer (Lepidoptera, Nymphalidae, Ithomiini, including the first records in Paraguay. This paper provides comments on the subspecific taxonomy and geographic distribution of Sais rosalia (Cramer, 1779 (Lepidoptera, Nymphalidae, Ithomiini, as well as an up-to-date distributional map, complemented with unpublished distributional data based on specimens deposited in the Coleção Entomológica Pe. Jesus S. Moure, Curitiba, Brazil and the Museo de Historia Natural, Lima, Peru. The following synonyms are proposed: Sais rosalia camariensis Haensch, 1905 syn. rev. as junior subjective synonym of Papilio rosalia Cramer, 1779 and Sais rosalia brasiliensis Talbot, 1928 syn. rev. as junior subjective synonym of Sais rosalia rosalinde Weymer, 1890. Additionally, the first country records of Sais rosalia in Paraguay, including the southernmost record of the species, are documented.
Zhang Xin; Zhao Yi-zhi; Zhang Zhi-xiang
Four species of the Comastoma genus (Geianaceae) in Helan Mountains between Inner Mongolia and Ningxia Province in China have been recognized by morphological and geographical taxonomy. These four species are C. falcatum (Turcz.) Toyokuni, C.polycladum (Diels et Gilg) T. N. Ho, C. tenellum (Rottb.) Toyokuni and C. acutum (Michx.) Y. Z. Zhao et X. Zhang. Among them, C.tenellum (Rottb.) is a new recorded species and C. acutum (Michx.) Y. Z. Zhao et X. Zhang is a new combination. The floristic, ecological and geographical distribution of each species was analyzed and then a new key of Comastoma in Helan Mountains and the distribution maps have been generated, which will provide a reference for the revision of this genus and the analysis of the flora in Helan Mountains.
BAŞAK, Elif; Aygen, Cem; KÜLKÖYLÜOĞLU, OKAN
Troughs are one of the main components of villages in Turkey. They are constructed by converting springs or underground waters. Until now, there has been no extensive study investigating the composition and diversity of trough zooplankton species. In order to contribute knowledge on the zooplanktons in troughs, 142 troughs were randomly sampled from 17 districts in Ankara Province between 22 June and 3 July 2011. A total of 18 zooplanktons including 11 Copepoda and 7 Cladocera species were de...
Saxena, R. B.
Saffron is produced from the dried styles of Crocus sativus L. (Iridaceae) which is unknown as wild plant, representing a sterile triploid. These belong to subgenus Crocus series Crocus sativus – series are closely related species; and are difficult to be separated taxonomically and have a complex cytology. Botany of C. sativus – series, taxonomy of their species and their infraspecific taxa are presented, and their distribution, ecology and phenology; full description and chromosome counts a...
Saxena, R B
Saffron is produced from the dried styles of Crocus sativus L. (Iridaceae) which is unknown as wild plant, representing a sterile triploid. These belong to subgenus Crocus series Crocus sativus - series are closely related species; and are difficult to be separated taxonomically and have a complex cytology. Botany of C. sativus - series, taxonomy of their species and their infraspecific taxa are presented, and their distribution, ecology and phenology; full description and chromosome counts are provided with key to their identification. PMID:22131743
Rebecca S Levine
Full Text Available Monkeypox virus, a zoonotic member of the genus Orthopoxviridae, can cause a severe, smallpox-like illness in humans. Monkeypox virus is thought to be endemic to forested areas of western and Central Africa. Considerably more is known about human monkeypox disease occurrence than about natural sylvatic cycles of this virus in non-human animal hosts. We use human monkeypox case data from Africa for 1970-2003 in an ecological niche modeling framework to construct predictive models of the ecological requirements and geographic distribution of monkeypox virus across West and Central Africa. Tests of internal predictive ability using different subsets of input data show the model to be highly robust and suggest that the distinct phylogenetic lineages of monkeypox in West Africa and Central Africa occupy similar ecological niches. High mean annual precipitation and low elevations were shown to be highly correlated with human monkeypox disease occurrence. The synthetic picture of the potential geographic distribution of human monkeypox in Africa resulting from this study should support ongoing epidemiologic and ecological studies, as well as help to guide public health intervention strategies to areas at highest risk for human monkeypox.
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Avian species in which males and females migrate to different nonbreeding areas provide candidate systems to study ecological factors underlying distribution patterns. Western Sandpipers (Calidris mauri) are such 'differential migrants'. They breed mainly in Alaska and overwinter along the American Pacific and Caribbean coastlines. In this thesis, I document an increasing proportion of females at more southerly latitudes. I review existing explanatory hypotheses for differential migratio...
Full Text Available The male of Latonigena auricomis Simon, 1893 is described for the first time and the female is redescribed. New records are provided for Argentina, Brazil and Uruguay. Notes on the natural history and a potential distribution model of the species are presented in the Neotropical Region.
Jahodová, Šárka; Fröberg, L.; Pyšek, Petr; Geltman, D.; Trybush, S.; Karp, A.
Wallingford : CAB International, 2007 - (Pyšek, P.; Cock, M.; Nentwig, W.; Ravn, H.), s. 1-19 ISBN 978-1-84593-206-0 Grant ostatní: -(XE) EVK2-CT-2001-00128 Institutional research plan: CEZ:AV0Z60050516 Keywords : Heracleum * genetic relationship * distribution Subject RIV: EF - Botanics
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Rákosy, Laszló; Tartally, András; Goia, Marin;
Maculinea nausithous (Bergsträsser, 1779) was recently discovered in two parts of the Transylvanian basin. External characters of these populations completely agree with the original description of Maculinea nausithous kijevensis (Sheljuzhko, 1928) and show some small but constant differences aga...... collected in northeastern Romania, in Kazakhstan and in the western part of the Altai Mts. Therefore we believe that this subspecies has a wider Euro-Siberian distribution....
Bohata, Karolina; Koppelmann, Rolf
In October 2010, the vertical distribution, biodiversity and maturity stages of Chaetognatha species were investigated at four stations located off Walvis Bay, Namibia. Seventeen species were detected and classified as pelagic, shallow-mesopelagic, deep-mesopelagic and bathypelagic species based upon the weighted mean depth derived from their average vertical distribution. High abundances of Chaetognatha were found in the upper 100 m at all stations of the Walvis Bay transect with a maximum value of 20837 ind. 1000 m(-3) at the outer shelf station near the surface. The community was dominated by species of the Serratodentata group. Furthermore, the distribution of Chaetognatha did not seem to be influenced by low oxygen concentrations. Stable isotope ratios of carbon and nitrogen in Chaetognatha were determined for seven different areas located off northern Namibia. The values of δ(15)N ranged from 6.05 ‰ to 11.39 ‰, while the δ(13)C values varied between -23.89 ‰ and -17.03 ‰. The highest values for δ(15)N were observed at the Walvis Bay shelf break station. The lowest δ(13)C values were found at the Rocky Point offshore station, which was statistically different from all other areas. Stable isotopes of carbon and nitrogen were determined for four taxa (Sagitta minima, Planctonis group, Sagitta enflata, Sagitta decipiens). In this case, the δ(15)N values ranged from 6.17 ‰ to 10.38 ‰, whereas the δ(13)C values varied from -22.70 ‰ to -21.56 ‰. The lowest δ(15)N values were found for S. minima. The C- and N-content revealed maximum C-values for S. decipiens and maximum N-values for the Planctonis group. The C:N ratio of Chaetognatha ranged between 5.25 and 6.20. Overall, Chaetognatha are a diverse group in the pelagic food web of the Benguela Upwelling System and act as competitors of fish larvae and jelly fish by preying on copepods. PMID:23342016
Full Text Available In October 2010, the vertical distribution, biodiversity and maturity stages of Chaetognatha species were investigated at four stations located off Walvis Bay, Namibia. Seventeen species were detected and classified as pelagic, shallow-mesopelagic, deep-mesopelagic and bathypelagic species based upon the weighted mean depth derived from their average vertical distribution. High abundances of Chaetognatha were found in the upper 100 m at all stations of the Walvis Bay transect with a maximum value of 20837 ind. 1000 m(-3 at the outer shelf station near the surface. The community was dominated by species of the Serratodentata group. Furthermore, the distribution of Chaetognatha did not seem to be influenced by low oxygen concentrations. Stable isotope ratios of carbon and nitrogen in Chaetognatha were determined for seven different areas located off northern Namibia. The values of δ(15N ranged from 6.05 ‰ to 11.39 ‰, while the δ(13C values varied between -23.89 ‰ and -17.03 ‰. The highest values for δ(15N were observed at the Walvis Bay shelf break station. The lowest δ(13C values were found at the Rocky Point offshore station, which was statistically different from all other areas. Stable isotopes of carbon and nitrogen were determined for four taxa (Sagitta minima, Planctonis group, Sagitta enflata, Sagitta decipiens. In this case, the δ(15N values ranged from 6.17 ‰ to 10.38 ‰, whereas the δ(13C values varied from -22.70 ‰ to -21.56 ‰. The lowest δ(15N values were found for S. minima. The C- and N-content revealed maximum C-values for S. decipiens and maximum N-values for the Planctonis group. The C:N ratio of Chaetognatha ranged between 5.25 and 6.20. Overall, Chaetognatha are a diverse group in the pelagic food web of the Benguela Upwelling System and act as competitors of fish larvae and jelly fish by preying on copepods.
Ramírez, Juan David; Hernández, Carolina; León, Cielo M; Ayala, Martha S; Flórez, Carolina; González, Camila
Leishmaniases are tropical zoonotic diseases, caused by kinetoplastid parasites from the genus Leishmania. New World (NW) species are related to sylvatic cycles although urbanization processes have been reported in some South American Countries such as Colombia. Currently, few studies show the relative distribution of Leishmania species related to cutaneous Leishmaniasis (CL) in South America due to the lack of accurate surveillance and public health systems. Herein, we conducted a systematic estimation of the Leishmania species causing CL in Colombia from 1980 to 2001 via molecular typing and isoenzymes. A total of 327 Leishmania isolates from humans, sandflies and reservoirs were typed as L. panamensis 61.3% (201), L. braziliensis 27.1% (88), L. lainsoni 0.6% (2), L. guyanensis 0.9% (3), L. infantum chagasi 4% (12), L. equatoriensis 0.6% (2), L. mexicana 2.1% (8), L. amazonensis 2.8% (9) and L. colombiensis 0.6% (2). This is the first report of two new Leishmania species circulating in Colombia and suggests the need to convince the Colombian government about the need to deploy and standardize tools for the species identification to provide adequate management to individuals suffering this pathology. PMID:27328969
Kaplan, Zdeněk; Symoens, J.-J.
Roč. 148, - (2005), s. 329-357. ISSN 0024-4074 R&D Projects: GA ČR(CZ) GA206/02/0773 Institutional research plan: CEZ:AV0Z60050516 Keywords : Potamogeton * taxonomy * Africa Subject RIV: EF - Botanics Impact factor: 1.462, year: 2005
Constance E. Taylor
Full Text Available Numerous canyons have been cut into the Rush Springs Sandstone of Permian age in West Central Oklahoma and subsequently refilled. Some of these canyons have been partly exposed by erosion of the sediment fill. Fossils collected indicate the canyon fill is sub-Pleistocene to geologically recent. The microclimate of these canyons is more mesic compared to the dryer prairie uplands. Sugar maple (Acer saccharum persists there, far west of its other locations in very eastern Oklahoma. Beginning in 1932 several of these sediment-filled canyons began a process of rapid erosion, exposing the rock walls of the canyons. This study is a comparison of Water Canyon and two of its branches: Water Branch Canyon, a stable canyon wooded with mature vegetation including sugar maple and Activity Branch Canyon, a newly excavated canyon branch that began eroding after excessive rainfall in 1932. This study was completed in 1960. Six transects are used to show the distribution of the 233 plant species found in the Water Canyon complex. Herbaceous species generally were unique to each canyon type.
Olson, R.J.; Voorhees, L.D.; Field, J.M.; Gentry, M.J.
Studies of global change and other regional issues depend on ecological data collected at multiple study areas or sites. An information system model is proposed for compiling diverse data from dispersed sources so that the data are consistent, complete, and readily available. The model includes investigators who collect and analyze field measurements, science teams that synthesize data, a project information system that collates data, a data archive center that distributes data to secondary users, and a master data directory that provides broader searching opportunities. Special attention to format consistency is required, such as units of measure, spatial coordinates, dates, and notation for missing values. Often data may need to be enhanced by estimating missing values, aggregating to common temporal units, or adding other related data such as climatic and soils data. Full documentation, an efficient data distribution mechanism, and an equitable way to acknowledge the original source of data are also required.
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Full Text Available L.png Aptenodytes_forsteri_NL.png Aptenodytes_forsteri_S.png Aptenodytes_forsteri_NS.png http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Aptenodytes+forsteri&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Apte...nodytes+forsteri&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Aptenodyte...s+forsteri&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Aptenodytes+forsteri&t=NS ...
Full Text Available Chile pepper Capsicum annuum Capsicum_annuum_L.png Capsicum_annuum_NL.png Capsicum_annuum_S.png Capsicum..._annuum_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Capsicum+annuum&t=L htt...p://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Capsicum+annuum&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Capsicum...+annuum&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Capsicum+annuum&t=NS ...
Full Text Available white shark Carcharodon carcharias Chordata/Vertebrata/Pisciformes Carcharodon_carcharias_L.png Carcharodon..._carcharias_NL.png Carcharodon_carcharias_S.png Carcharodon_carcharias_NS.png http:/.../biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Carcharodon+carcharias&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Carcharodon...+carcharias&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Carcharodon...+carcharias&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Carcharodon+carcharias&t=NS ...
Full Text Available Bacillus subtilis Bacillus subtilis Bacillus_subtilis_L.png Bacillus_subtilis_NL.png Bacillus..._subtilis_S.png Bacillus_subtilis_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Bacillus...+subtilis&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Bacillus+subtilis&t=NL http://biosciencedbc.j...p/taxonomy_icon/icon.cgi?i=Bacillus+subtilis&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Bacillus
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Thompson, C.C.; Amaral, G.R.; Campeao, M.; Edwards, R.A.; Polz, M.F.; Dutilh, B.E.; Ussery, D.W.; Sawabe, T.; Swings, J.; Thompson, F.L.
Microbial taxonomy should provide adequate descriptions of bacterial, archaeal, and eukaryotic microbial diversity in ecological, clinical, and industrial environments. Its cornerstone, the prokaryote species has been re-evaluated twice. It is time to revisit polyphasic taxonomy, its principles, and
Full Text Available 63 Papilionid taxa of Laos are reported representing 60 biological species. Of these, the occurrence of Papilio elephenor is unproven, and that of Papilio krishna is refuted, leaving 58 species confirmed for Laos. Notes on their taxonomy, distribution, phenology and variation are given. The following synonymies or changes of status are herewith listed:Graphium antiphates itamputi is regarded as a separate subspecies from pompilius stat. rev.Papilio tamerlanus timur Ney, 1911 is a synonym of Papilio alebion mullah Alphéraky, 1897, syn. nov. The following combinations are therefore proposed for the collective species: Graphium mullah mullah (Alphéraky, 1897 comb. nov. applies to the Sichuan population; Graphium mullah chungianus (Murayama, 1961 comb. nov., for the Taiwanese subspecies; and Graphium mullah kooichii (Morita, 1996 comb. nov. for the Lao subspecies.The true type of Papilio arycles sphinx Fruhstorfer, 1899 is identified, and arycleoides Fruhstorfer, 1902 placed in synonymy, syn. nov.Teinopalpus imperialis bhumipoli Nakano & Sukkit, 1985, T. i. gerritesi Nakano, 1995, T. i. gillesi Turlin, 1991, and T. i. hakkaorum Schäffler 2004 are shown to be synonyms of Teinopalpus imperialis imperatrix de Nicéville, 1899, syn. nov.Atrophaneura varuna liziensis Zhao, 1997 is synonymized with A. varuna astorion (Westwood, 1842 syn. nov.The names elegans Chou et al., 2000, pulcher Chou et al., 2000 and longimacula Wang & Niu, 2002 are sunk as synonyms of Papilio bianor bianor syn. nov.Papilio bianor significans Fruhstorfer, 1902 is regarded as a valid subspecies (stat. rev. and the ranges of Papilio bianor gladiator Fruhstorfer,  and ganesa Doubleday, 1842 are clarified.Papilio noblei de Nicéville,  is shown to be monotypic, and haynei Tytler, 1926 is sunk as a synonym syn. nov.Papilio hipponous siamensis Godfrey, 1916 is synonymized with pitmani Elwes & de Nicéville,  syn. nov.The taxon imitata Monastyrskii & Devyatkin, 2003
A. Townsend Peterson
Abstract.—Modeling approaches that relate known occurrences of species to landscape features to discover ecological properties and predict geographic occurrences have seen extensive recent application in ecology, systematics, and conservation. A key component in this process is estimation or characterization of species’ distributions in ecological space, which can then be useful in understanding their potential distributions in geographic space. Hence, this process is often termed ecological ...
Full Text Available Toxoplasma gondii Toxoplasma gondii Toxoplasma_gondii_L.png Toxoplasma_gondii_NL.png Toxoplasma..._gondii_S.png Toxoplasma_gondii_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Toxoplasma...+gondii&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Toxoplasma+gondii&t=NL http://biosciencedbc.j...p/taxonomy_icon/icon.cgi?i=Toxoplasma+gondii&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Toxoplas...ma+gondii&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=113 ...
Full Text Available Anopheles stephensi Anopheles stephensi Arthropoda Anopheles_stephensi_L.png Anopheles_stephen...si_NL.png Anopheles_stephensi_S.png Anopheles_stephensi_NS.png http://biosciencedbc.jp/taxonomy_i...con/icon.cgi?i=Anopheles+stephensi&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Anopheles+stephensi&...t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Anopheles+stephensi&t=S htt...p://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Anopheles+stephensi&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=149 ...
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Full Text Available Japanese Ratsnake Elaphe climacophora Chordata/Vertebrata/Reptilia/etc Elaphe_climacophora_L.png Elaphe_clim...acophora_NL.png Elaphe_climacophora_S.png Elaphe_climacophora_NS.png http://bioscie...ncedbc.jp/taxonomy_icon/icon.cgi?i=Elaphe+climacophora&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Elaphe+clima...cophora&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Elaphe+clima...cophora&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Elaphe+climacophora&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=3 ...
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Full Text Available Trypanosoma brucei Trypanosoma brucei Trypanosoma_brucei_L.png Trypanosoma_brucei_NL.png Trypan...osoma_brucei_S.png Trypanosoma_brucei_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Trypan...osoma+brucei&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Trypanosoma+brucei&t=NL http://bioscie...ncedbc.jp/taxonomy_icon/icon.cgi?i=Trypanosoma+brucei&t=S http://biosciencedbc.jp.../taxonomy_icon/icon.cgi?i=Trypanosoma+brucei&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=121 ...
Herbert, David G
A complete inventory of the known Recent vetigastropod fauna of South Africa is provided. Bibliographic citations to works discussing the taxonomy, synonymy and distribution of the species in a southern African or south-western Indian Ocean context are provided. Additional explanatory notes are given where pertinent. New genus records for South Africa: Acremodontina B.A. Marshall, 1995; Choristella Bush, 1879; Cocculinella Thiele, 1909; Conjectura Finlay, 1926; Crosseola Iredale, 1924; Falsimargarita Powell, 1951; Lepetella Verrill, 1880; Profundisepta McLean & Geiger, 1998; Stomatella Lamarck, 1816; Stomatia Helbling, 1779; Stomatolina Iredale, 1937; Synaptocochlea Pilsbry, 1890; Tibatrochus Nomura, 1940; Visayaseguenzia Poppe, Tagaro & Dekker, 2006; Zetela Finlay, 1926. New species records for South Africa: Acremodontina aff. carinata Powell, 1940; Anatoma finlayi (Powell, 1937); Anatoma munieri (P. Fischer, 1862); Calliotropis acherontis B.A. Marshall, 1979; Calliotropis bucina Vilvens, 2006; Cocculinella minutissima (E.A. Smith, 1904); Diodora ruppellii (G.B. Sowerby (I), 1835); Emarginula costulata Deshayes, 1863; Emarginula decorata Deshayes, 1863; Jujubinus hubrechti Poppe, Tagaro & Dekker, 2006; Lepetella sp.; Seguenzia orientalis Thiele, 1925; Stomatella auricula Lamarck, 1816; Stomatia phymotis Helbling, 1779; Stomatolina angulata (A. Adams, 1850); Stomatolina cf. calliostoma (A. Adams, 1850); Stomatolina aff. danblumi Singer & Mienis, 1999; Stomatolina cf. rubra (Lamarck, 1822); Stomatolina sp.; Synaptocochlea concinna (Gould, 1845); Tectus mauritianus (Gmelin, 1791); Tibatrochus cf. incertus (Schepman, 1908); Turbo imperialis Gmelin, 1791; Turbo tursicus Reeve, 1848; Visayaseguenzia compsa (Melvill, 1904).New species: Spectamen martensi, replacement name for Spectamen semisculptum sensu Herbert (1987) (non Martens, 1904). New name: Oxystele antoni is proposed as a new name for Trochus (Turbo) variegatus (non Gmelin, 1791 =Heliacus) Anton, 1838. Revised
This thesis focuses on the ethnobotany, phylogeny and taxonomy of the genus Gloriosa L. over its distributional range. Some Gloriosa species are known to have economic and commercial value, but the genus is also well known for its complex alpha taxonomy. An appropriate taxonomy for this group is of
Phaeohelotium undulatum comb. nov. and Phaeoh. succineoguttulatum sp.nov., two segregates of the Discinella terrestris aggregate found under Eucalyptus in Spain:taxonomy, molecular biology, ecology and distribution%西班牙桉树林下土小平盘菌复合群中两个独立的种——暗柔膜菌属一新组合及一新种:分类、分子生物学、生态与分布
Hans-Otto BARAL; Ricardo GAL(A)N; Gonzalo PLATAS; Raúl TENA
Two terricolous species of the Australasian Discinella terrestris aggregate are reported from Mediterranean eucalypt plantations on the Iberian Peninsula.The two species were recorded in Spain since 1996-97,but were possibly imported several decades earlier,perhaps already during the mid-eighteenth century.Their obvious restriction to Eucalyptus,presumably by mycorrhiza,is discussed.One of them (here named Phaeohelotium undulatum) possesses a yellow-ochraceous hymenium and amyloid asci,whereas the other (Phaeoh.succineoguttulatum) deviates by an ochre-brown hymenium due to abundant,refractive,yellowish-brown vacuolar guttules in the paraphyses,and by consistently inamyloid asci.Both species have asci arising from simple septa,a Hymenoscyphus-type of apical ring,ascospores that turn brown when overmature,and a gelatinized ectal excipulum of prismatic to hyphoid cells.Ecologically the two taxa are very similar,though Phaeoh.succineoguttulatum is adapted to a little cooler and more humid climate,following its occurrence in the north and northwest of Spain,though both species were sometimes recorded at the same site in the centre and south of Spain.Our molecular analysis revealed that these two species and a specimen from New Zealand,here accepted as Phaeohelotium confusum,form a clade with Phaeoh.monticola (which is currently believed to be conspecific with the type of Phaeohelotium,Phaeoh.flavum),whereas a sequence gained by us from Discinella boudieri (type of Discinella) is quite distant from D.terrestris,clustering instead with Pezoloma ciliifera,a typical species of Pezoloma.The problematic generic limits around Hymenoscyphus,Cudoniella and Phaeohelotium are discussed.The Discinella terrestris aggregate is here transferred to Phaeohelotium,though this genus is apparently paraphyletic.Altematively,Cudoniella or Hymenoscyphus could be extended to include the species of the Phaeohelotium clade.Based on morphological features as well as DNA sequences,we conclude that
Full Text Available The paper presents the current distribution of Orobanche picridis in Poland and Ukraine, within the Polish borders in the interwar period, based on a critical revision of herbarium and literature data as well as the results of my field studies. The largest number of its localities is in S and SE Poland in the Wyżyna Śląsko-Krakowska, Wyżyna Małopolska, Wyżyna Lubelska uplands, Middle Roztocze, Small Polesie, the Pogórze Przemyskie foreland and in the former Tarnopol province (W Ukraine. These are the north-easternmost sites known for the species and extend its limit range. A map of its distribution in Poland and Ukraine is included. The taxonomy, biology, and ecology of O. picridis are also discussed.
Shabani, Farzin; Kumar, Lalit; Taylor, Subhashni
This study set out to model potential date palm distribution under current and future climate scenarios using an emission scenario, in conjunction with two different global climate models (GCMs): CSIRO-Mk3.0 (CS), and MIROC-H (MR), and to refine results based on suitability under four nonclimatic parameters. Areas containing suitable physicochemical soil properties and suitable soil taxonomy, together with land slopes of less than 10° and suitable land uses for date palm ( Phoenix dactylifera) were selected as appropriate refining tools to ensure the CLIMEX results were accurate and robust. Results showed that large regions of Iran are projected as likely to become climatically suitable for date palm cultivation based on the projected scenarios for the years 2030, 2050, 2070, and 2100. The study also showed CLIMEX outputs merit refinement by nonclimatic parameters and that the incremental introduction of each additional parameter decreased the disagreement between GCMs. Furthermore, the study indicated that the least amount of disagreement in terms of areas conducive to date palm cultivation resulted from CS and MR GCMs when the locations of suitable physicochemical soil properties and soil taxonomy were used as refinement tools.
Roč. 639, č. 1 (2010), s. 245-259. ISSN 0018-8158. [Workshop of the International Association of Phytoplankton Taxonomy /15./. Ramot, 23.11.2008-30.11.2008] R&D Projects: GA AV ČR IAA600050704 Institutional research plan: CEZ:AV0Z60050516 Keywords : cyanobacteria * taxonomic classification * molecular evaluation Subject RIV: EF - Botanics Impact factor: 1.964, year: 2010
Full Text Available Clementine Citrus clementina Citrus_clementina_L.png Citrus_clementina_NL.png Citrus_clem...entina_S.png Citrus_clementina_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Citrus+clementi...na&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Citrus+clementina&t=NL http://biosciencedbc.jp/taxon...omy_icon/icon.cgi?i=Citrus+clementina&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Citrus+clementina&t=NS ...
Full Text Available Guillardia theta Guillardia theta Guillardia_theta_L.png Guillardia_theta_NL.png Guillardia_the...ta_S.png Guillardia_theta_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Guillardia+the...ta&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Guillardia+theta&t=NL http://biosciencedbc.jp/taxono...my_icon/icon.cgi?i=Guillardia+theta&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Guillardia+the
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Full Text Available es_NL.png Aegilops_speltoides_S.png Aegilops_speltoides_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cg...i?i=Aegilops+speltoides&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Aegilops+speltoides&t=NL http://biosciencedbc.jp/taxonom...y_icon/icon.cgi?i=Aegilops+speltoides&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Aegilops+speltoides&t=NS ...
Full Text Available nomy_icon/icon.cgi?i=Delphinus+delphis&t=L http://biosciencedbc.jp/taxonomy_icon/ic...on.cgi?i=Delphinus+delphis&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=...Delphinus+delphis&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Delphinus+delphis&t=NS ... ...etacea Delphinus_delphis_L.png Delphinus_delphis_NL.png Delphinus_delphis_S.png Delphinus_delphis_NS.png http://biosciencedbc.jp/taxo
Full Text Available Escherichia coli Escherichia coli Escherichia_coli_L.png Escherichia_coli_NL.png Escherichia_coli..._S.png Escherichia_coli_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Escherichia+coli...&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Escherichia+coli&t=NL http://biosciencedbc.jp/taxono...my_icon/icon.cgi?i=Escherichia+coli&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Escherichia+coli&t=NS ...
Full Text Available giant panda Ailuropoda melanoleuca Chordata/Vertebrata/Mammalia/Theria/Eutheria/Carnivora Ailuropoda..._melanoleuca_L.png Ailuropoda_melanoleuca_NL.png Ailuropoda_melanoleuca_S.png Ailuropoda_me...lanoleuca_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ailuropoda+melanoleuca&t=L http://bioscien...cedbc.jp/taxonomy_icon/icon.cgi?i=Ailuropoda+melanoleuca&t=NL http://biosciencedb...c.jp/taxonomy_icon/icon.cgi?i=Ailuropoda+melanoleuca&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ailuropoda+melanoleuca&t=NS ...
Full Text Available Asiatic tapir Tapirus indicus Chordata/Vertebrata/Mammalia/Theria/Eutheria/etc. Tapirus_indicus_L.png Tapi...rus_indicus_NL.png Tapirus_indicus_S.png Tapirus_indicus_NS.png http://biosciencedbc....jp/taxonomy_icon/icon.cgi?i=Tapirus+indicus&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tapirus+ind...icus&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tapirus+indicus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tapirus+indicus&t=NS ...
Full Text Available okapi Okapia johnstoni Chordata/Vertebrata/Mammalia/Theria/Eutheria/Artiodactyla Okapia_john...stoni_L.png Okapia_johnstoni_NL.png Okapia_johnstoni_S.png Okapia_johnstoni_NS.png http://bioscienc...edbc.jp/taxonomy_icon/icon.cgi?i=Okapia+johnstoni&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Okapia+john...stoni&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Okapia+johnston...i&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Okapia+johnstoni&t=NS ...
Full Text Available Oryzias javanicus Oryzias javanicus Chordata/Vertebrata/Pisciformes Oryzias_javanicus_L.png Oryzias_java...nicus_NL.png Oryzias_javanicus_S.png Oryzias_javanicus_NS.png http://biosciencedbc.jp/t...axonomy_icon/icon.cgi?i=Oryzias+javanicus&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Oryzias+javan...icus&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Oryzias+javanicus&t=S ...http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Oryzias+javanicus&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=77 ...
Full Text Available blue whale Balaenoptera musculus Chordata/Vertebrata/Mammalia/Theria/Eutheria/Cetacea Balaenoptera..._musculus_L.png Balaenoptera_musculus_NL.png Balaenoptera_musculus_S.png Balaenoptera_musculu...s_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Balaenoptera+musculus&t=L http://biosciencedbc.jp/...taxonomy_icon/icon.cgi?i=Balaenoptera+musculus&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Balae...noptera+musculus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Balaenoptera+musculus&t=NS ...
Full Text Available coelacanth Latimeria chalumnae Chordata/Vertebrata/Pisciformes Latimeria_chalumnae_L.png Latime...ria_chalumnae_NL.png Latimeria_chalumnae_S.png Latimeria_chalumnae_NS.png http://biosciencedbc.j...p/taxonomy_icon/icon.cgi?i=Latimeria+chalumnae&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Latimeri...a+chalumnae&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Latimeria+chalu...mnae&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Latimeria+chalumnae&t=NS ...
Full Text Available platypus Ornithorhynchus anatinus Chordata/Vertebrata/Mammalia/Prototheria Ornithorhynchus_anatinus..._L.png Ornithorhynchus_anatinus_NL.png Ornithorhynchus_anatinus_S.png Ornithorhynchus_anatinus..._NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ornithorhynchus+anatinus&t=L http://biosciencedbc....jp/taxonomy_icon/icon.cgi?i=Ornithorhynchus+anatinus&t=NL http://biosciencedbc.j...p/taxonomy_icon/icon.cgi?i=Ornithorhynchus+anatinus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ornithorhynchus+anatinus&t=NS ...
Full Text Available Magellanic penguin Spheniscus magellanicus Chordata/Vertebrata/Aves Spheniscus_magellanic...us_L.png Spheniscus_magellanicus_NL.png Spheniscus_magellanicus_S.png Spheniscus_magellanicus_NS.png h...ttp://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Spheniscus+magellanicus&t=L http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Spheniscus+magellanicus&t=NL http://biosciencedbc.jp/taxonomy_ic...on/icon.cgi?i=Spheniscus+magellanicus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Spheniscus+magellanic
Full Text Available dugong Dugong dugon Chordata/Vertebrata/Mammalia/Theria/Eutheria/etc. Dugong_dugon_L.png Dugong_dugo...n_NL.png Dugong_dugon_S.png Dugong_dugon_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Dugong+dugo...n&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Dugong+dugon&t=NL http://bioscienced...bc.jp/taxonomy_icon/icon.cgi?i=Dugong+dugon&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Dugong+dugon&t=NS ...
Full Text Available Nile crocodile Crocodylus niloticus Chordata/Vertebrata/Reptilia/etc Crocodylus_nil...oticus_L.png Crocodylus_niloticus_NL.png Crocodylus_niloticus_S.png Crocodylus_niloticus_NS.png http://biosc...iencedbc.jp/taxonomy_icon/icon.cgi?i=Crocodylus+niloticus&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Crocodylus+ni...loticus&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Crocodylus+ni...loticus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Crocodylus+niloticus&t=NS ...
Full Text Available purple urchin Strongylocentrotus purpuratus Echinodermata Strongylocentrotus_purpuratus_L.png Strongylocentr...otus_purpuratus_NL.png Strongylocentrotus_purpuratus_S.png Strongylocentrotus_purpu...ratus_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Strongylocentrotus+purpuratus&t=L http://biosc...iencedbc.jp/taxonomy_icon/icon.cgi?i=Strongylocentrotus+purpuratus&t=NL http://bi...osciencedbc.jp/taxonomy_icon/icon.cgi?i=Strongylocentrotus+purpuratus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Strongylocentrotus+purpuratus&t=NS ...
Full Text Available Aardvark Orycteropus afer Chordata/Vertebrata/Mammalia/Theria/Eutheria/etc. Orycteropus_afe...r_L.png Orycteropus_afer_NL.png Orycteropus_afer_S.png Orycteropus_afer_NS.png http://biosciencedbc....jp/taxonomy_icon/icon.cgi?i=Orycteropus+afer&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Orycteropus+afe...r&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Orycteropus+afer&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Orycteropus+afer&t=NS ...
Eman Ghanem Nayef
Full Text Available This paper highlights an effort to study the educational objective domain taxonomies including Bloom’s taxonomy, Lorin Anderson’s taxonomy, and Wilson’s taxonomy. In this study a comparison among these three taxonomies have been done. Results show that Bloom’s taxonomy is more suitable as an analysis tool to Educational Objective domain.
Eman Ghanem Nayef; Nik Rosila Nik Yaacob; Hairul Nizam Ismail
This paper highlights an effort to study the educational objective domain taxonomies including Bloom’s taxonomy, Lorin Anderson’s taxonomy, and Wilson’s taxonomy. In this study a comparison among these three taxonomies have been done. Results show that Bloom’s taxonomy is more suitable as an analysis tool to Educational Objective domain.
M. Corrie SCHOEMAN, F. P. D. (Woody COTTERILL, Peter J. TAYLOR, Ara MONADJEM
Full Text Available We tested the prediction that at coarse spatial scales, variables associated with climate, energy, and productivity hypotheses should be better predictor(s of bat species richness than those associated with environmental heterogeneity. Distribution ranges of 64 bat species were estimated with niche-based models informed by 3629 verified museum specimens. The influence of environmental correlates on bat richness was assessed using ordinary least squares regression (OLS, simultaneous autoregressive models (SAR, conditional autoregressive models (CAR, spatial eigenvector-based filtering models (SEVM, and Classification and Regression Trees (CART. To test the assumption of stationarity, Geographically Weighted Regression (GWR was used. Bat species richness was highest in the eastern parts of southern Africa, particularly in central Zimbabwe and along the western border of Mozambique. We found support for the predictions of both the habitat heterogeneity and climate/productivity/ energy hypotheses, and as we expected, support varied among bat families and model selection. Richness patterns and predictors of Miniopteridae and Pteropodidae clearly differed from those of other bat families. Altitude range was the only independent variable that was significant in all models and it was most often the best predictor of bat richness. Standard coefficients of SAR and CAR models were similar to those of OLS models, while those of SEVM models differed. Although GWR indicated that the assumption of stationarity was violated, the CART analysis corroborated the findings of the curve-fitting models. Our results identify where additional data on current species ranges, and future conservation action and ecological work are needed [Current Zoology 59 (3: 279–293, 2013].
M.Corrie SCHOEMAN; F.P.D.(Woody) COTTERILL; Peter J.TAYLOR; Ara MONADJEM
We tested the prediction that at coarse spatial scales,variables associated with climate,energy,and productivity hypotheses should be better predictor(s) of bat species richness than those associated with environmental heterogeneity.Distribution ranges of 64 bat species were estimated with niche-based models informed by 3629 verified museum specimens.The influence of environmental correlates on bat richness was assessed using ordinary least squares regression (OLS),simultaneous autoregressive models (SAR),conditional autoregressive models (CAR),spatial eigenvector-based filtering models (SEVM),and Classification and Regression Trees (CART).To test the assumption of stationarity,Geographically Weighted Regression (GWR) was used.Bat species richness was highest in the eastern parts of southern Africa,particularly in central Zimbabwe and along the western border of Mozambique.We found support for the predictions of both the habitat heterogeneity and climate/productivity/energy hypotheses,and as we expected,support varied among bat families and model selection.Richness patterns and predictors of Miniopteridae and Pteropodidae clearly differed from those of other bat families.Altitude range was the only independent variable that was significant in all models and it was most often the best predictor of bat richness.Standard coefficients of SAR and CAR models were similar to those of OLS models,while those of SEVM models differed.Although GWR indicated that the assumption of stationarity was violated,the CART analysis corroborated the findings of the curve-fitting models.Our results identify where additional data on current species ranges,and future conservation action and ecological work are needed [Current Zoology 59 (3):279-293,2013].
Full Text Available chinese pangolin Manis pentadactyla Chordata/Vertebrata/Mammalia/Theria/Eutheria/et...i=Manis+pentadactyla&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Manis+pentadactyla&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=190 ...
Present approaches to species invasions are reactive in nature. This scenario results in management that perpetually lags behind the most recent invasion and makes control much more difficult. In contrast, spatially explicit ecological niche modeling provides an effective solut...
NSGIC GIS Inventory (aka Ramona) — This is a MD iMAP hosted service. Find more information at http://imap.maryland.gov. The purpose of the Targeted Ecological Areas is to: (1) systematically identify...
Peter M Yates; Michelle R Heupel; Tobin, Andrew J.; Simpfendorfer, Colin A.
As coastal species experience increasing anthropogenic pressures there is a growing need to characterise the ecological drivers of their abundance and habitat use, and understand how they may respond to changes in their environment. Accordingly, fishery-independent surveys were undertaken to investigate shark abundance along approximately 400 km of the tropical east coast of Australia. Generalised linear models were used to identify ecological drivers of the abundance of immature blacktip Car...
Full Text Available Ecological niche modelingthat is, estimation of the dimensions of fundamental ecological niches of speciesto predict their geographic distributions is increasingly being employed in systematics, ecology, conservation, public health, etc. This technique is often (of necessity based on data comprising records of presences only. In recent years, many modeling approaches have been devised to estimate these interrelated expressions of a species’ ecology, distributional biology, and evolutionary historynevertheless, in many cases, a formal basis in ecological and evolutionary theory has been lacking. In this paper, we outline such a formal basis for the suite of techniques that can be termed ‘ecological niche modeling,’ analyze example situations that can be modeled using these techniques, and clarify the interpretation of results.
Full Text Available Japanese skink Eumeces latiscutatus Chordata/Vertebrata/Reptilia/etc Eumeces_latiscutatus_L.png Eumeces_lati...scutatus_NL.png Eumeces_latiscutatus_S.png Eumeces_latiscutatus_NS.png http://biosciencedbc.jp/ta...xonomy_icon/icon.cgi?i=Eumeces+latiscutatus&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Eumeces+latiscutat...us&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Eumeces+latiscutat...us&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Eumeces+latiscutatus&t=NS ...
Full Text Available Japanese serow Capricornis crispus Chordata/Vertebrata/Mammalia/Theria/Eutheria/Artiodactyla Capricorn...is_crispus_L.png Capricornis_crispus_NL.png Capricornis_crispus_S.png Capricornis_crispus..._NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Capricornis+crispus&t=L http://biosciencedbc.jp/tax...onomy_icon/icon.cgi?i=Capricornis+crispus&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Capricorn...is+crispus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Capricornis+crispus&t=NS ...
Full Text Available pronghorn Antilocapra americana Chordata/Vertebrata/Mammalia/Theria/Eutheria/Artiodactyla Antilocapra_americ...ana_L.png Antilocapra_americana_NL.png Antilocapra_americana_S.png Antilocapra_american...a_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Antilocapra+americana&t=L http://biosciencedbc....jp/taxonomy_icon/icon.cgi?i=Antilocapra+americana&t=NL http://biosciencedbc.jp/t...axonomy_icon/icon.cgi?i=Antilocapra+americana&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Antilocapra+americana&t=NS ...
Full Text Available dog Canis lupus familiaris Chordata/Vertebrata/Mammalia/Theria/Eutheria/Carnivora Canis_lupus..._familiaris_L.png Canis_lupus_familiaris_NL.png Canis_lupus_familiaris_S.png Canis_lupus_familiari...s_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Canis+lupus+familiaris&t=L http://biosciencedbc.jp.../taxonomy_icon/icon.cgi?i=Canis+lupus+familiaris&t=NL http://biosciencedbc.jp/tax...onomy_icon/icon.cgi?i=Canis+lupus+familiaris&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Canis+lupus+familiaris&t=NS ...
Full Text Available pygmy chimpanzee Pan paniscus Chordata/Vertebrata/Mammalia/Theria/Eutheria/Primate Pan_pan...iscus_L.png Pan_paniscus_NL.png Pan_paniscus_S.png Pan_paniscus_NS.png http://biosciencedbc.jp/taxono...my_icon/icon.cgi?i=Pan+paniscus&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Pan+paniscus&t=NL http:...//biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Pan+paniscus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Pan+paniscus&t=NS ...
Mandáková, T.; Münzbergová, Zuzana
Roč. 98, - (2006), s. 845-856. ISSN 0305-7364 Institutional research plan: CEZ:AV0Z60050516 Keywords : Distribution * Ecology * Aster amellus Subject RIV: EF - Botanics Impact factor: 2.448, year: 2006
This study assessed the diversity of fungi living in rocks from different altitudes in the Atacama Desert, Chile. Eighty-one fungal isolates obtained were identified as 21 species of 12 genera from Ascomycota using molecular techniques. Cladosporium halotolerans, Penicillium chrysogenum and Penicill...
Gonçalves, Vívian N; Cantrell, Charles L; Wedge, David E; Ferreira, Mariana C; Soares, Marco Aurélio; Jacob, Melissa R; Oliveira, Fabio S; Galante, Douglas; Rodrigues, Fabio; Alves, Tânia M A; Zani, Carlos L; Junior, Policarpo A S; Murta, Silvane; Romanha, Alvaro J; Barbosa, Emerson C; Kroon, Erna G; Oliveira, Jaquelline G; Gomez-Silva, Benito; Galetovic, Alexandra; Rosa, Carlos A; Rosa, Luiz H
This study assessed the diversity of cultivable rock-associated fungi from Atacama Desert. A total of 81 fungal isolates obtained were identified as 29 Ascomycota taxa by sequencing different regions of DNA. Cladosporium halotolerans, Penicillium chrysogenum and Penicillium cf. citrinum were the most frequent species, which occur at least in four different altitudes. The diversity and similarity indices ranged in the fungal communities across the latitudinal gradient. The Fisher-α index displayed the higher values for the fungal communities obtained from the siltstone and fine matrix of pyroclastic rocks with finer grain size, which are more degraded. A total of 23 fungal extracts displayed activity against the different targets screened. The extract of P. chrysogenum afforded the compounds α-linolenic acid and ergosterol endoperoxide, which were active against Cryptococcus neoformans and methicillin-resistance Staphylococcus aureus respectively. Our study represents the first report of a new habitat of fungi associated with rocks of the Atacama Desert and indicated the presence of interesting fungal community, including species related with saprobes, parasite/pathogen and mycotoxigenic taxa. The geological characteristics of the rocks, associated with the presence of rich resident/resilient fungal communities suggests that the rocks may provide a favourable microenvironment fungal colonization, survival and dispersal in extreme conditions. PMID:26235221
The paper at hand describes an approach to automatise the creation of a class taxonomy. Information about objects, e.g. "a tank is armored and moves by track", but no prior knowledge about taxonomy structure is presented to a connectionist system which organizes itself by means of activation spreading (McClelland and Rumelhart, 1981) and weight adjustments. The resulting connectionist network has a form of a taxonomy sought-after.
Full Text Available The taxonomy, biology, and population status of flying foxes (Pteropus spp. remain little investigated in the Caroline Islands, Micronesia, where multiple endemic taxa occur. Our study evaluated the taxonomic relationships between the flying foxes of the Mortlock Islands (a subgroup of the Carolines and two closely related taxa from elsewhere in the region, and involved the first ever field study of the Mortlock population. Through a review of historical literature, the name Pteropus pelagicus Kittlitz, 1836 is resurrected to replace the prevailing but younger name P. phaeocephalus Thomas, 1882 for the flying fox of the Mortlocks. On the basis of cranial and external morphological comparisons, Pteropus pelagicus is united taxonomically with P. insularis “Hombron and Jacquinot, 1842” (with authority herein emended to Jacquinot and Pucheran, 1853, and the two formerly monotypic species are now treated as subspecies—P. pelagicus pelagicus in the Mortlocks, and P. p. insularis on the islands of Chuuk Lagoon and Namonuito Atoll. The closest relative of P. pelagicus is P. tokudae Tate, 1934, of Guam, which is best regarded as a distinct species. Pteropus p. pelagicus is the only known resident bat in the Mortlock Islands, a chain of more than 100 atoll islands with a total land area of <12 km2. Based on field observations in 2004, we estimated a population size of 925–1,200 bats, most of which occurred on Satawan and Lukunor Atolls, the two largest and southernmost atolls in the chain. Bats were absent on Nama Island and possibly extirpated from Losap Atoll in the northern Mortlocks. Resident Mortlockese indicated bats were more common in the past, but that the population generally has remained stable in recent years. Most P. p. pelagicus roosted alone or in groups of 5–10 bats; a roost of 27 was the largest noted. Diet is comprised of at least eight plant species, with breadfruit (Artocarpus spp. being a preferred food. Records of females
Yates, Peter M; Heupel, Michelle R; Tobin, Andrew J; Simpfendorfer, Colin A
As coastal species experience increasing anthropogenic pressures there is a growing need to characterise the ecological drivers of their abundance and habitat use, and understand how they may respond to changes in their environment. Accordingly, fishery-independent surveys were undertaken to investigate shark abundance along approximately 400 km of the tropical east coast of Australia. Generalised linear models were used to identify ecological drivers of the abundance of immature blacktip Carcharhinus tilstoni/Carcharhinus limbatus, pigeye Carcharhinus amboinensis, and scalloped hammerhead Sphyrna lewini sharks. Results indicated general and species-specific patterns in abundance that were characterised by a range of abiotic and biotic variables. Relationships with turbidity and salinity were similar across multiple species, highlighting the importance of these variables in the functioning of communal shark nurseries. In particular, turbid environments were especially important for all species at typical oceanic salinities. Mangrove proximity, depth, and water temperature were also important; however, their influence varied between species. Ecological drivers may promote spatial diversity in habitat use along environmentally heterogeneous coastlines and may therefore have important implications for population resilience. PMID:25853657
Peter M Yates
Full Text Available As coastal species experience increasing anthropogenic pressures there is a growing need to characterise the ecological drivers of their abundance and habitat use, and understand how they may respond to changes in their environment. Accordingly, fishery-independent surveys were undertaken to investigate shark abundance along approximately 400 km of the tropical east coast of Australia. Generalised linear models were used to identify ecological drivers of the abundance of immature blacktip Carcharhinus tilstoni/Carcharhinus limbatus, pigeye Carcharhinus amboinensis, and scalloped hammerhead Sphyrna lewini sharks. Results indicated general and species-specific patterns in abundance that were characterised by a range of abiotic and biotic variables. Relationships with turbidity and salinity were similar across multiple species, highlighting the importance of these variables in the functioning of communal shark nurseries. In particular, turbid environments were especially important for all species at typical oceanic salinities. Mangrove proximity, depth, and water temperature were also important; however, their influence varied between species. Ecological drivers may promote spatial diversity in habitat use along environmentally heterogeneous coastlines and may therefore have important implications for population resilience.
Thiffault, Nelson; Grondin, Pierre; Noël, Jean; Poirier, Véronique
Understory species play a significant role in forest ecosystem dynamics. As such, species of the Ericaceae family have a major effect on the regeneration of tree species in boreal ecosystems. It is thus imperative to understand the ecological gradients controlling their distribution and abundance, so that their impacts can be taken into account in sustainable forest management. Using innovative analytical techniques from landscape ecology, we aimed to position, along ecological gradients, four Ericaceae found in the boreal forest of Quebec (Canada) (Rhododendron groenlandicum, Kalmia angustifolia, Chamaedaphne calyculata, and Vaccinium spp), to regionalize these species into landscape units relevant to forest management, and to estimate the relative importance of several ecological drivers (climate, disturbances, stand attributes, and physical environment) that control the species distribution and abundance. We conducted our study in boreal Quebec, over a study area covering 535,355 km(2). We used data from 15,339 ecological survey plots and forest maps to characterize 1422 ecological districts covering the study region. We evaluated the relative proportion of each ericaceous species and explanatory variables at the district level. Vegetation and explanatory variables matrices were used to conduct redundancy, cluster, and variation partitioning analyses. We observed that ericaceous species are mainly distributed in the western part of the study area and each species has a distinct latitudinal and longitudinal gradient distribution. On the basis of these gradients, we delimited 10 homogeneous landscape units distinct in terms of ericaceous species abundance and environmental drivers. The distribution of the ericaceous species along ecological gradients is closely related to the overlaps between the four sets of explanatory variables considered. We conclude that the studied Ericaceae occupy specific positions along ecological gradients and possess a specific
California Department of Resources — The Arundo Distribution layer is a compilation of Arundo donax observations in northern and central California, obtained from numerous sources, including Arundo...
Full Text Available NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Loris+lydekkerianus&t=L http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Loris+lydekkerianus&t=NL http://biosciencedbc.jp/taxonomy_ic...on/icon.cgi?i=Loris+lydekkerianus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Loris+lydekkerianus&t=NS ...
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Carlos-Júnior, L A; Barbosa, N P U; Moulton, T P; Creed, J C
All organisms have a set of ecological conditions (or niche) which they depend on to survive and establish in a given habitat. The ecological niche of a species limits its geographical distribution. In the particular case of non-indigenous species (NIS), the ecological requirements of the species impose boundaries on the potential distribution of the organism in the new receptor regions. This is a theoretical assumption implicit when Ecological Niche Models (ENMs) are used to assess the potential distribution of NIS. This assumption has been questioned, given that in some cases niche shift may occur during the process of invasion. We used ENMs to investigate whether the model fit with data from the native range of the coral Tubastraea coccinea Lesson, 1829 successfully predicts its invasion in the Atlantic. We also identified which factors best explain the distribution of this NIS. The broad native distributional range of T. coccinea predicted the invaded sites well, especially along the Brazilian coast, the Caribbean Sea and Gulf of Mexico. The occurrence of T. coccinea was positively related to calcite levels and negatively to eutrophy, but was rather unaffected to other variables that often limit other marine organisms, suggesting that this NIS has wide ecological limits, a trait typical of invasive species. PMID:25465286
Full Text Available The genus Haploclastus is endemic to India and is represented by six species. One of the species H. validus Pocock, 1899 was described from Matheran and has remained poorly known in terms of its natural history and distribution. During recent surveys the species was for the first time found again since its description nearly 110 years ago. Based on the new material collected it is redescribed and data on its natural history and distribution are added. It is the first record of an Indian theraphosid spider, which closes its burrow with a trapdoor.
Full Text Available Dipterocarpaceae is one of the biggest family with >500 species in the world, and most of dipterocarps population are grown in Indonesia which have high economical value of wood. One of the most important value from dipterocarps species is high on endemicities; there are up to 128 species (53.78% from 238 dipterocarps species in Indonesia. Distribution of dipterocarps species would be affected by some factors especially edaphic, climate, and altitude. In Indonesia the dipterocarps species distribution could be shown from islands groups, number of species and forest types. Based on the observation of herbarium collection in Herbarium Bogoriense the distribution of the most dipterocarps species was in the altitude of 0-500 m and 500-1000 m on the dipterocarps forest type. Kalimantan and Sumatra were the two bigger islands with have the dipterocarps species distributed relatively high on population and species.
Peña, M.; Carbonell, A.; Tor, A.; Alvarez-Berastegui, D.; Balbín, R.; dos Santos, A.; Alemany, F.
The complexity of the natural processes lead to many nonlinear interacting factors that influence the distribution and survival of marine pelagic species, particularly in their larval phase. The management of these ecosystems requires techniques that unveil those interactions by studying the system globally, including all relevant variables and combining both community and environmental data in a single step. Specifically, we apply an unsupervised neural network, the Self-Organising Map (SOM), to a combined dataset of environmental and decapod larvae community data from the Balearic sea, obtained in two years with contrasting environmental scenarios, as an Exploratory Data Analysis (EDA) technique that provides a global and more detailed view of both the environmental processes and their influence on the distribution of such planktonic community. We examine the parental influence on the initial larval distribution by aggregating data by adult habitat, which also increments the signal to noise ratio (mean data patterns over noise due to outliers or measurement errors), and consider the distribution of larvae by development stage (as a proxy of age and hence of potential dispersion). The joined study of parental effect, drifting or concentration events determined by dynamical processes in the whole water column, and lifespan, draws the possible paths followed by larvae, and highlights the more influencing variables in their distribution. Investigation of the different aspects of dynamic height (absolute values, gradients or edges and correlations) clarified the effect of the oceanographic processes on decapods' larvae.
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Full Text Available Phylogenetic analyses place Octaviania asterosperma in the Boletales, with Leccinum being the closest relative. Results of the structural investigation of O. asterosperma ectomycorrhiza with Fagus sylvatica confirm this systematic position. In Europe the species is an ectomycorrhizal partner of broad-leaved trees, such as Carpinus, Corylus, Fagus, Quercus and Tilia. This paper aims at presenting the new data to the distribution of O. asterosperma in Central Europe. The description of the basidiocarps discovered in Poland in the recent years is also given, together with evidence for the parasitic relationship of Sepedonium laevigatum with O. asterosperma. We also present the information concerning all known localities of the species in Poland and its distribution map. Data on the ecologz, distribution and status O. asterosperma in Europe, and some structural aspects of basidiocarps and spores, are also summarized.
Piotr Mleczko; Maciej Kozak; Maria Ławrynowicz; Grzegorz Dubiel
Phylogenetic analyses place Octaviania asterosperma in the Boletales, with Leccinum being the closest relative. Results of the structural investigation of O. asterosperma ectomycorrhiza with Fagus sylvatica confirm this systematic position. In Europe the species is an ectomycorrhizal partner of broad-leaved trees, such as Carpinus, Corylus, Fagus, Quercus and Tilia. This paper aims at presenting the new data to the distribution of O. asterosperma in Central Europe. The description of the basi...
U.S. Environmental Protection Agency — EPA's Web Taxonomy is a faceted hierarchical vocabulary used to tag web pages with terms from a controlled vocabulary. Tagging enables search and discovery of EPA's...
Mabika, Nyasha; Barson, Maxwell; Van Dyk, Cobus; Avenant-Oldewage, Annemariè
Parasites of the tigerfish (Hydrocynus vittatus) were investigated in the period October 2014 to July 2015 in the Sanyati Basin, Lake Kariba. The fish were collected using seine netting and also during the annual Kariba International Tiger Fishing Tournament. A total of 80 fish specimens (24 males and 56 females) were collected and were infected with the following seven parasite taxa: Monogenea (Annulotrema sp.1 from the gills and Annulotrema sp.2 from the skin), Nematoda (Contracaecum larvae), Cestoda (bothriocephalid, larval cyclophyllid), Copepoda (Lamproglena hemprichii), pentastomid, Myxosporea (Myxobolus sp.,) and unicellular ciliate parasites (Trichodina sp., Tetrahymena sp., and unidentified). Annulotrema sp. 1 was observed in all fish and had the highest prevalence, mean intensity and abundance. The fish organs infected were gills, skin, fin, body cavity, stomach, intestines, mesentery, liver, kidney, brain cavity and swim bladder. No parasites were observed in the muscle, eyes and blood. The distribution of the parasites was highest in the gills and lowest in the brain cavity and swimbladder. Bothriocephalids, pentastomes and Trichodina sp. were not observed in male fish. Sex was not related to the intensity of parasites. The results of the study showed that H. vittatus has a richer parasite community than other previous investigated alestids. Pentastomes, Myxobolus sp., Trichodina sp., Tetrahymena sp. and bothriocephalid cestodes are new records for H. vittatus in Zimbabwe. PMID:27447228
McInerny, Greg J.; Etienne, Rampal S.
In this first of three papers we examine the use of niche concepts in ecology and especially in species distribution modelling (SDM). This paper deliberately focuses on the lack of clarity found in the term niche. Because its meanings are so diverse, the term niche tends to create confusion and requ
Tyne, J A; Loneragan, N R; Kopps, A M; Allen, S.J.; Krützen, M; Bejder, L
In Shark Bay, Western Australia, bottlenose dolphins Tursiops sp. carry conical sponges Echinodictyum mesenterinum on their rostra in the only documented cetacean foraging behaviour using a tool (‘sponging’). In this study, we examined the influence of various ecological factors on live sponge distribution and the occurrence of sponging in parts of the western gulf of Shark Bay. We assessed sponge distribution and seagrass cover along 12 transects of approximately 11 km length, by recording s...
Dhar-Chowdhury, Parnali; Haque, C. Emdad; Lindsay, Robbin; Hossain, Shakhawat
This study examined household risk factors and prevalence, abundance, and distribution of immature Aedes aegypti and Aedes albopictus, and their association with socioeconomic and ecological factors at urban zonal and household levels in the city of Dhaka, Bangladesh. During the 2011 monsoon, 826 households in 12 randomly selected administrative wards were surveyed for vector mosquitoes. Results revealed that the abundance and distribution of immature Ae. aegypti and Ae. albopictus, and pupae...
Anthony Baabereyir; Sarah Jewitt; Sarah O’Hara
This paper investigates the ‘ecological distribution’ and associated environmental injustices of Accra’s growing domestic-waste burden and examines how inequalities in the spatial distribution of waste-collection services and waste-disposal sites reflect the uneven distribution of power and wealth within Ghanaian society. Particular emphasis is placed on inequalities in municipal service provision associated with Accra’s integration within the global economy, which are illustrated by opposing...
Understanding factors limiting populations’ growth and persistence is crucial to evaluate the current conservation status and possible future management of plant populations. This Ph.D. thesis focussed on ecological constraints related to population trends and the conservation status of Helianthemum caput-felis Boiss., characterized by a highly fragmented areal isolated from the distribution centre. In particular, the specifics aims of the thesis were: (1) to analyse the distribution range, p...
Jalili, Adel; Rabie, Mina; Azarnivand, Hossein; Hodgson, John G.; Arzani, Hossein; Jamzad, Ziba; Asri, Younes; Hamzehee, Behnam; Ghasemi, Farzaneh; Hesamzadeh Hejazi, S. M.; Abbas-Azimi, R.
Because of their high proportion in the plant kingdom polyploid taxa are considered to have had evolutionary advantages over their diploid ancestors. These advantages may have included new characteristics that enable polyploids to occupy a broader range of habitats. In this context, we assess the ecological range of Artemisia sieberi, a canopy dominant within an important vegetation type in Iran. We assess the extent to which ploidy covaries with geographical and ecological distribution and look for ecologically-significant differences in the functional characteristics of diploids and polyploids. Populations of A. sieberi were sampled widely in Iran and soil characteristics, climate and anatomical and phytochemical plant attributes were measured. Also, in parallel, an independent genetic assessment of populations was carried out using genetic fingerprinting. Two ploidy levels were identified: 75% of the 34 populations of A. sieberi populations sampled were tetraploid (2n = 4x = 36) with the remainder diploid (2n = 2x = 18). Plants of differing ploidy also differed anatomically, genetically and chemically. Tetraploid populations had larger cells and lower stomatal densities and a different essential oil composition. They also appear ecologically distinct, occupying more fertile, mesic habitats than diploids. Genetic fingerprinting revealed the existence of two genetically differentiated subgroups independent of ploidy but with some geographic and ecological pattern. We conclude that diploids and tetraploids have a different ecological distribution and that the absence of mixed diploid-tetraploid populations is a reflection of differing fitness in different habitats. We suspect that a key ecological difference between diploids and tetraploids is the increased stomatal size of tetraploids, possibly resulting from the increased genome and hence cell size following polyploidisation. Polyploid-formation may be constrained in arid habitats by problems of water
The concentration of natural uranium in soil, forage grass, ox, sheep and camel at Jiuquan area was determined, and the data were analyzed. Its natural distribution under equilibrium and the transfer from the soil to the forage grass then to the animal body were studied. The results show that the uranium concentration in soil was decreasing from 3.09mg/kg to 2.36 mg/kg (corresponding to the surface to 30 cm), then increasing to 2.82mg/kg (corresponding to 100 cm), so the lowest was at the depth of 30 cm. The descending order of concentration in eight kind of forage grasess is Chenopodium album L., Triticum Sativum Lam, Agropyron cristatum(L.) Gaertu, Hordeum vulgare var nudum (Ard.) Hook, Avenasativa L., Sphaerophysa salsula(Pall.) DC, Medicago sativa L. and Phragmites communis Trin, i.e. from the highest 1.48 x 10-3mg/kg to the lowest 0.051 x 10-3mg/kg. The U concentration in mutton was (0.48 ∼ 1.86) x 10-6mg/kg and the average was 0.89 x 10-6mg/kg, in sheep bone was (3.60 ∼ 16.20) x 10-6mg/kg and the average was 9.9 x 10-6mg/kg. The concentration of uranium in the mixed sample of beef and ox bone was 7.54 x 10-6mg/kg, and in the camel meat and bone was 3.35 x 10-6mg/kg. The uptake of uranium from soil by the forage grass varies with the amount of U in the soil, the type of soil and grass species. The transfer coefficients CT1 of uranium from soil surface layer, i. e. O to 30 cm, to forage grass were 2.98 x 10-4 for Chenopodium album L., 2.79 x 10-4 for Triticum sativum Lam and 2.67 x 10-5 for Phragmites communis Trin respectively. The coefficients CT2 of U from the forage grass to ox, sheep and camel body were 7.29 x 10-3 ∼ 1.44 x 10-1 for sheep bone, 5.10 x 10-3 ∼ 1.25 x 10-1 for the mixed sample of beef and ox bone, 2.26 x 10-3 ∼ 5.5 x 10-2 for the mixed sample of camel meat and bone and 2.45 x 10-5 ∼ 2.41 x 10-4 for mutton respectively. The same results were obtained for eight kind of forage grasses
Gulinck Hubert; Peterson Andrew T; Neerinckx Simon B; Deckers Jozef; Leirs Herwig
Abstract Background Plague is a rapidly progressing, serious illness in humans that is likely to be fatal if not treated. It remains a public health threat, especially in sub-Saharan Africa. In spite of plague's highly focal nature, a thorough ecological understanding of the general distribution pattern of plague across sub-Saharan Africa has not been established to date. In this study, we used human plague data from sub-Saharan Africa for 1970–2007 in an ecological niche modeling framework t...
Neerinckx, Simon B; Peterson, Andrew T; Gulinck, Hubert;
of plague across sub-Saharan Africa has not been established to date. In this study, we used human plague data from sub-Saharan Africa for 1970-2007 in an ecological niche modeling framework to explore the potential geographic distribution of plague and its ecological requirements across Africa. Results We...... predict a broad potential distributional area of plague occurrences across sub-Saharan Africa. General tests of model's transferability suggest that our model can anticipate the potential distribution of plague occurrences in Madagascar and northern Africa. However, generality and predictive ability tests...... using regional subsets of occurrence points demonstrate the models to be unable to predict independent occurrence points outside the training region accurately. Visualizations show plague to occur in diverse landscapes under wide ranges of environmental conditions. Conclusion We conclude...
Full Text Available Abstract Background Plague is a rapidly progressing, serious illness in humans that is likely to be fatal if not treated. It remains a public health threat, especially in sub-Saharan Africa. In spite of plague's highly focal nature, a thorough ecological understanding of the general distribution pattern of plague across sub-Saharan Africa has not been established to date. In this study, we used human plague data from sub-Saharan Africa for 1970–2007 in an ecological niche modeling framework to explore the potential geographic distribution of plague and its ecological requirements across Africa. Results We predict a broad potential distributional area of plague occurrences across sub-Saharan Africa. General tests of model's transferability suggest that our model can anticipate the potential distribution of plague occurrences in Madagascar and northern Africa. However, generality and predictive ability tests using regional subsets of occurrence points demonstrate the models to be unable to predict independent occurrence points outside the training region accurately. Visualizations show plague to occur in diverse landscapes under wide ranges of environmental conditions. Conclusion We conclude that the typical focality of plague, observed in sub-Saharan Africa, is not related to fragmented and insular environmental conditions manifested at a coarse continental scale. However, our approach provides a foundation for testing hypotheses concerning focal distribution areas of plague and their links with historical and environmental factors.
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Brown, Christopher J.
Climate change is shifting species’ distribution and phenology. Ecological traits, such as mobility or reproductive mode, explain variation in observed rates of shift for some taxa. However, estimates of relationships between traits and climate responses could be influenced by how responses are measured. We compiled a global dataset of 651 published marine species’ responses to climate change, from 47 papers on distribution shifts and 32 papers on phenology change. We assessed the relative importance of two classes of predictors of the rate of change, ecological traits of the responding taxa and methodological approaches for quantifying biological responses. Methodological differences explained 22% of the variation in range shifts, more than the 7.8% of the variation explained by ecological traits. For phenology change, methodological approaches accounted for 4% of the variation in measurements, whereas 8% of the variation was explained by ecological traits. Our ability to predict responses from traits was hindered by poor representation of species from the tropics, where temperature isotherms are moving most rapidly. Thus, the mean rate of distribution change may be underestimated by this and other global syntheses. Our analyses indicate that methodological approaches should be explicitly considered when designing, analysing and comparing results among studies. To improve climate impact studies, we recommend that: (1) re-analyses of existing time-series state how the existing datasets may limit the inferences about possible climate responses; (2) qualitative comparisons of species’ responses across different studies be limited to studies with similar methodological approaches; (3) meta-analyses of climate responses include methodological attributes as covariates and; (4) that new time series be designed to include detection of early warnings of change or ecologically relevant change. Greater consideration of methodological attributes will improve the
Taxonomy, the identification, naming, and classification of living things, is an indispensable unit in any biology curriculum and indeed, an integral part of biological science. Taxonomy catalogues life's diversity and is an essential tool for communication. Textbook discussions of taxonomy range anywhere from three to eight domains of kingdoms.…
Finelli, Cynthia J.; Borrego, Maura; Rasoulifar, Golnoosh
The diversity of engineering education research provides an opportunity for cross-fertilisation of ideas and creativity, but it also can result in fragmentation of the field and duplication of effort. One solution is to establish a standardised taxonomy of engineering education terms to map the field and communicate and connect research initiatives. This report describes the process for developing such a taxonomy, the EER Taxonomy. Although the taxonomy focuses on engineering education research in the United States, inclusive efforts have engaged 266 individuals from 149 cities in 30 countries during one multiday workshop, 7 conference sessions, and several other virtual and in-person activities. The resulting taxonomy comprises 455 terms arranged in 14 branches and 6 levels. This taxonomy was found to satisfy four criteria for validity and reliability: (1) keywords assigned to a set of abstracts were reproducible by multiple researchers, (2) the taxonomy comprised terms that could be selected as keywords to fully describe 243 articles in 3 journals, (3) the keywords for those 243 articles were evenly distributed across the branches of the taxonomy, and (4) the authors of 31 conference papers agreed with 90% of researcher-assigned keywords. This report also describes guidelines developed to help authors consistently assign keywords for their articles by encouraging them to choose terms from three categories: (1) context/focus/topic, (2) purpose/target/motivation, and (3) research approach.
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Chalghaf, Bilel; Chlif, Sadok; Mayala, Benjamin; Ghawar, Wissem; Bettaieb, Jihène; Harrabi, Myriam; Benie, Goze Bertin; Michael, Edwin; Salah, Afif Ben
Cutaneous leishmaniasis is a very complex disease involving multiple factors that limit its emergence and spatial distribution. Prediction of cutaneous leishmaniasis epidemics in Tunisia remains difficult because most of the epidemiological tools used so far are descriptive in nature and mainly focus on a time dimension. The purpose of this work is to predict the potential geographic distribution ofPhlebotomus papatasiand zoonotic cutaneous leishmaniasis caused byLeishmania majorin Tunisia using Grinnellian ecological niche modeling. We attempted to assess the importance of environmental factors influencing the potential distribution ofP. papatasiand cutaneous leishmaniasis caused byL. major Vectors were trapped in central Tunisia during the transmission season using CDC light traps (John W. Hock Co., Gainesville, FL). A global positioning system was used to record the geographical coordinates of vector occurrence points and households tested positive for cutaneous leishmaniasis caused byL. major Nine environmental layers were used as predictor variables to model theP. papatasigeographical distribution and five variables were used to model theL. majorpotential distribution. Ecological niche modeling was used to relate known species' occurrence points to values of environmental factors for these same points to predict the presence of the species in unsampled regions based on the value of the predictor variables. Rainfall and temperature contributed the most as predictors for sand flies and human case distributions. Ecological niche modeling anticipated the current distribution ofP. papatasiwith the highest suitability for species occurrence in the central and southeastern part of Tunisian. Furthermore, our study demonstrated that governorates of Gafsa, Sidi Bouzid, and Kairouan are at highest epidemic risk. PMID:26856914
Ismael Martins Pereira; Vera Lúcia Gomes-Klein; Milton Groppo
We have modeled the ecological niche for 12 plant species belonging to the genus Davilla (Dilleniaceae) which occur in the Atlantic Forest of Brazil. This group includes endemic species lianas threatened by extinction and is therefore a useful indicator for forest areas requiring conservation. The aims are to compare the distribution and richness of species within the protected areas, assessing the degree of protection and gap analysis of reserves for this group. We used the Maxent algorithm ...
Segniagbeto, G.H.; Bour, R.; Ohler, A.; Dubois, A.; Rodel, M. O.; Trape, Jean-François; Fretey, J.; Petrozzi, F.; L. Luiselli
The chelonian fauna of Togo (West Africa) has been scarcely studied to date. In this article, we review and summarize all available data on the distribution, ecology, and conservation status of the chelonian species of Togo and present a short historical perspective on the development of studies on these reptiles. Overall, 13 chelonian species are found in Togo, 4 being marine, 3 terrestrial, and 6 freshwater. Among the marine species, only 2 of them nest on Togolese beaches (Lepidochelys oli...
The genus Gracilaria belongs lo the group of seaweeds that are of commercial value and are being harvested worldwide for their active ingredient agar: A pre-requisite for the harvesting of these plants, which has often been ignored, is a study on their ecological requirements within an ecosystem which leads to better understanding of the plants and hence good management practices and conservation in cases where wild stocks are harvested. With this aim in mind a study on the distribution ecolo...
Trajanovska Sonja; Blaženčić Jelena; Trajanovski S.; Budzakoska-Gjoreska Biljana
Our research into 52 profiles of the littoral zone of the Macedonian part of Lake Ohrid and numerous samples taken from its surroundings has resulted in a detailed picture of the composition of the Charophyta vegetation in the lake. The results of the research also include data regarding the species composition and present state of Nitella. The dominant species of Nitella is Nitella opaca, which is characterized by a specific distribution, morphological variability and ecology. The pres...
Shashi Chauhan; Ravinda K. Chauhan; Ashok K. Agarwal
An ecological study of the microfungi occurring in the various forest soils of Pachmarhi Hills, India has been carried-out by the soil plate technique. Soil samples from 5 different forest communities viz., moist deciduous forest dominated by tree ferns, Diospyros forest, Terminalia forest, Shorea forest and scrub forest dominated by Acacia and Dalbergia sp. were collected during October, 1983. Some physico-chemical characteristics of the soil were analysed and their role in distribution of f...
Knowles, L Lacey; Carstens, Bryan C; Keat, Marcia L
Understanding the impact of climate-induced distributional shifts on species divergence, like those accompanying the Pleistocene glacial cycles [1, 2], requires tools that explicitly incorporate the geographic configuration of past distributions into analyses of genetic differentiation. Depending on the historical distribution of species, genetic differences may accumulate among ancestral source populations, but there is long-standing debate whether displacements into glacial refugia promoted divergence. Here we integrate coalescent-based genetic models [3, 4] with ecological-niche modeling [5, 6] to generate expectations for patterns of genetic variation based on an inferred past distribution of a species. Reconstruction of the distribution of a montane grasshopper species during the last glacial maximum suggests that Melanoplus marshalli populations from the sky islands of Colorado and Utah were likely colonized from multiple ancestral source populations. The genetic analyses provide compelling evidence that the historical distribution of M. marshalli-namely, spatial separation of multiple refugia-was conducive to genetic differentiation. The coupling of genetic and ecological-niche modeling provides a new and flexible tool for integrating paleoenvironmental details into species-specific predictions of population structure that can increase our understanding of why the glacial cycles promoted speciation in some taxa and yet inhibited diversification in others [7, 8]. PMID:17475496
Parra-Henao, Gabriel; Angulo, Víctor Manuel; Osorio, Lisardo; Jaramillo-O, Nicolás
Triatoma dimidiata Latreille is the second most important vector of Chagas' disease in Colombia and is found in urban and periurban areas. From January 2007 to June 2008, we performed field work in 8 departments, 18 municipalities, and 44 rural villages, covering most of its known distribution and all of its ecological zones in the country. The goal was to determine the geographical distribution, the ecology, and house infestation indices of T. dimidiata over its range and hence the Chagas' disease transmission risk. In Colombia, T. dimidiata occupies a wide variety of ecosystems, from transformed ecosystems in the Andean biome with shrub and xerofitic vegetation to very dense forests in the humid tropical forests in the Sierra Nevada of Santa Marta. According to genetic and ecological criteria, at least two T. dimidiata forms of this species are present: populations from the northwest of the country (Caribbean plains) are restricted to palm tree habitats, and domestic involvement is limited to sporadic visits because of attraction by light; and populations of the east region (Andean mountains) presenting a complex distributional pattern including sylvatic, peridomestic, and domiciliated ecotopes, and occupying a great variety of life zones. The latter population is of epidemiological importance due to the demonstrated migration and genetical flow of individuals among the different habitats. Control, therefore, must take into account its diversity of habitats. PMID:26487247
Zhou, Xiao-Hong; Liu, Long-Mei; Chen, Xi; Chen, Zhi-Gang; Zhang, Jin-Ping; Li, Yi-Min; Liu, Biao
In order to reveal the pollution loading of heavy metals in Dammed Jinshan lake, six heavy metals (As, Cu, Pb, Cd, Zn, Cr) from 18 sediment samples were analyzed using ICP, and the distribution characteristics of heavy metals in the sediment were comprehensively evaluated through concentration coefficient, geo-acumulation indexes, potential ecological risk evaluation and traceability analysis. The results showed that (1) the average contents of As, Pb, Cu, Zn, Cr, Cd were 23.22, 26.20, 24.42, 143.12, 245.30 and 0.67 mg x kg(-1), respectively, in the surface sediments of dammed Jinshan Lake. The average contents of Pb and Cu were lower than the primary standard and secondary standards of soil environmental quality standards. The average contents of Zn and Cr were lower than the primary standard and higher than the secondary standards of soil environmental quality standards. The average contents of As and Cd were higher than the primary and secondary standards of soil environmental quality standards. From the spatial distribution, the contents of Pb and Zn were the highest at sampling site No. 1, which was located at the Beigushan Square. The contents of As,Cu, Cr, Cd were the highest at sampling sites Nos. 12, 3, 14, and 7, respectively; (2) The order of concentration coefficient was As > Cr > Cd > Pb > Zn > Cu, which indicated that the enrichment amount of As was the highest and that of Cu was the lowest; (3) Based on the geo-acumulation indexes, the Cu is clean and Pb, Zn, Cd is the light pollution and As, Cr moderate pollution; (4) The order of Potential ecological risk coefficient was Cd > As > Cr > Pb > Cu > Zn, Cr, Pb, Cu, Zn were of light ecological risk and As, Cd were of medium ecological risk. From the spatial distribution, the sampling sites Nos. 1, 6, 7 and 12 had medium potential ecological risk, and the rest sample points had slight potential ecological risk; (5) The principal component analysis (PCA) revealed that the main reason for the differences
Ye, Hua-Xiang; Zang, Shu-Ying; Zhang, Li-Juan; Zhang, Yu-Hong
This study investigated the concentrations of heavy metals in the sediments of the Zhalong Wetland using ICP-MS, analyzed their spatial distributions, evaluated the potential ecological risk, and explored the pollution sources and environmental influencing factors. The results can be summarized as the followings: (1) The concentrations of Hg, Cd, As, Cu, Pb, Zn and Cr were 0.065, 0.155, 10.26, 18.20, 21.35, 52.08 and 46.47 mg x kg(-1), respectively, which were all above the soil background values of the Songnen Plain. Their spatial distributions were distinctly different. The concentration of heavy metals in the north was higher than that in the south, and the east was higher than the west. Particularly in the eastern region, the concentrations of Hg and Cd were 20.8 and 32.4 times the minimum values of the whole area. And in the core zone, the concentration was relatively low. (2) The sequence of the potential ecological risk posed by the metals was Hg > Cd > As > Pb > Cu > Cr > Zn. The average potential ecological risk index (RI) of the Zhalong Wetland was 171.9 (ranged from 76.9-473.5), suggesting a moderate ecological risk. However, the potential ecological risk was extremely high in the east which should be treated as the major heavy metal pollution prevention site in the future. (3) Except for Hg and Pb, the concentrations of all heavy metals were significantly correlated to each other, indicating that those heavy metals had homology. (4) Organic matter was the major environmental influencing factor. However, the trend of land salinization in the Zhalong Wetland has been intensified, indicating a higher risk of heavy metal releasing from the sediments, to which the local authorities should pay enough attention. PMID:23798110
Galloway, Jerry P.
This paper outlines a theoretical paradigm for distinguishing thinking, knowing and believing. A new taxonomy is presented for categorizing levels of knowing and outlines a structure of justification for each level. The paper discusses and explains the importance of such distinctions in decision making and thinking in general.
Full Text Available Life Science licensed under CC Attribution2.1 Japan ヒトアイコンの別候補を作成してみました。 ttamura 2008/11/06 17:14:44 ... ...Human Homo sapiens Homo_sapiens_L.png 13.png Taxonomy icon (c) Database Center for
Lund, Haakon; Ørnager, Susanne
Purpose – The purpose of this paper is to explore theoretically and empirically the understanding and implementation of an information taxonomy in the UN organization World Food Programme (WFP) by analysing users’ information behaviour and by establishing a minimum set of cross-silo metadata (tax...... research carried out on current taxonomy projects in corporate environments and international emergency response organizations and few has touched on how knowledge organization systems can enhance or constrain staff’s ability to access online content....... (taxonomy). Design/methodology/approach – The study implies the use of both qualitative and quantitative methods. This includes desk review of key documents and interviews with information architecture staff from various WFP units; data collection carried out as semi-structured staff interviews in WFP; log...... analyses of search log-files from WFP intranet portal (WFPgo) from September to November 2013, the results were applied and a suggested taxonomy tested at workshops conducted for the staff in headquarters. Findings – The results reveal an organization with a high demand for easier access to information and...
Full Text Available .png Taxonomy icon (c) Database Center for Life Science licensed under CC Attribution2.1 Japan イメージを差し替えました(添付は旧イメージ) ttamura 2009/04/21 12:50:03 ...
Full Text Available 215.png Taxonomy icon (c) Database Center for Life Science licensed under CC Attribution2.1 Japan アイコン:電子顕微鏡バージョン bando 2010/02/15 15:30:03 2010/02/15 15:30:03 ...
Duniway, Michael C.; Miller, Mark E.; Brown, Joel R.; Toevs, Gordon
We are pleased to see the letter by Schimel and Chadwick (Front Ecol Environ 2013; 11: 405–06), highlighting the importance of soil characterization in ecological and biogeochemical research and explaining the value of soil taxonomy, and we agree with the authors that reporting soil
Di Luca, Marco; Toma, Luciano; Boccolini, Daniela; Severini, Francesco; La Rosa, Giuseppe; Minelli, Giada; Bongiorno, Gioia; Montarsi, Fabrizio; Arnoldi, Daniele; Capelli, Gioia; Rizzoli, Annapaola; Romi, Roberto
Mosquitoes in the Culex pipiens complex are considered to be involved in the transmission of a range of pathogens, including West Nile virus (WNV). Although its taxonomic status is still debated, the complex includes species, both globally distributed or with a more limited distribution, morphologically similar and characterised by different physiological and behavioural traits, which affect their ability as vectors. In many European countries, Cx. pipiens and its sibling species Culex torrentium occur in sympatry, exhibiting similar bionomic and morphological characters, but only Cx. pipiens appears to play a vector role in WNV transmission. This species consists of two biotypes, pipiens and molestus, which can interbreed when in sympatry, and their hybrids can act as WNV-bridge vectors, due to intermediate ecological features. Considering the yearly WNV outbreaks since 2008 and given the morphological difficulties in recognising species and biotypes, our aim was to molecularly identify and characterised Cx. pipiens and Cx. torrentium in Italy, using recently developed molecular assays. Culex torrentium was not detected; as in other European countries, the pipiens and molestus biotypes were widely found in sympatry with hybrids in most environments. The UPGMA cluster analysis applied to CQ11 genotypic frequencies mainly revealed two groups of Cx. pipiens populations that differed in ecological features. The high propensity of the molestus biotype to exist in hypogean environments, where the habitat's physical characteristics hinder and preclude the gene flow, was shown. These results confirmed the CQ11 assay as a reliable diagnostic method, consistent with the ecological and physiological aspects of the populations analysed. Since the assessment of the actual role of three biotypes in the WNV circulation remains a crucial point to be elucidated, this extensive molecular screening of Cx. pipiens populations can provide new insights into the ecology of the species
Ammons, Archie W.; Daly, Marymegan
The distribution of deepwater Actiniaria is poorly known. Rarely are these organisms identified to family, as this requires both well-preserved specimens and taxonomic expertise. Ecological information is similarly lacking. From the results of a comprehensive surveying program in the deep Gulf of Mexico, we report the occurrence of nine species of Actiniaria. For the most abundant four of these, we plot distributions and discuss habitat use, morphological variation, and feeding strategies. Actiniaria in the Gulf appear to have broad, basin-wide distributions with little depth preference. Faunal biomass is highest in the NE Gulf within submarine canyons or at the base of slope escarpments. Attachment mode is mostly opportunistic on various types of hard substrata, including trash. Sediment-dwelling forms are very abundant at an organically rich site within a large submarine canyon.
Full Text Available Javan tree shrew Tupaia javanica Chordata/Vertebrata/Mammalia/Theria/Eutheria/etc. Tupaia_java...nica_L.png Tupaia_javanica_NL.png Tupaia_javanica_S.png Tupaia_javanica_NS.png http://bioscienced...bc.jp/taxonomy_icon/icon.cgi?i=Tupaia+javanica&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tupaia+java...nica&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tupaia+javanica&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Tupaia+javanica&t=NS ...
Full Text Available Southern elephant seal Mirounga leonina Chordata/Vertebrata/Mammalia/Theria/Eutheri...a/Carnivora Mirounga_leonina_L.png Mirounga_leonina_NL.png Mirounga_leonina_S.png Mirounga_leonina_NS.png ht...tp://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Mirounga+leonina&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Mirounga+leonina...&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Mirounga+leonina...&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Mirounga+leonina&t=NS ...
Full Text Available silver-gray brushtail possum Trichosurus vulpecula Chordata/Vertebrata/Mammalia/Theria/Metatheria Trichosur...us_vulpecula_L.png Trichosurus_vulpecula_NL.png Trichosurus_vulpecula_S.png Trichosur...us_vulpecula_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Trichosurus+vulpecula&t=L http://biosc...iencedbc.jp/taxonomy_icon/icon.cgi?i=Trichosurus+vulpecula&t=NL http://bioscience...dbc.jp/taxonomy_icon/icon.cgi?i=Trichosurus+vulpecula&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Trichosurus+vulpecula&t=NS ...
Full Text Available flava_L.png Ptychodera_flava_NL.png Ptychodera_flava_S.png Ptychodera_flava_NS.png http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Ptychodera+flava&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ptychodera+fla...va&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Ptychodera+flava&t=S http://biosciencedbc.jp/taxo...nomy_icon/icon.cgi?i=Ptychodera+flava&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=161 ...
Full Text Available California sea lion Zalophus californianus Chordata/Vertebrata/Mammalia/Theria/Euth...eria/Carnivora Zalophus_californianus_L.png Zalophus_californianus_NL.png Zalophus_californianus_S.png Zalophus_california...nus_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Zalophus+californianus&t=L http://...biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Zalophus+californianus&t=NL http://bios...ciencedbc.jp/taxonomy_icon/icon.cgi?i=Zalophus+californianus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Zalophus+californianus&t=NS ...
Full Text Available Japanese Bush Warbler Cettia diphone Chordata/Vertebrata/Aves Cettia_diphone_L.png Cettia_diphone..._NL.png Cettia_diphone_S.png Cettia_diphone_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cettia+diphone...&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cettia+diphone&t=NL http://bioscie...ncedbc.jp/taxonomy_icon/icon.cgi?i=Cettia+diphone&t=S http://biosciencedbc.jp/tax...onomy_icon/icon.cgi?i=Cettia+diphone&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=26 ...
Full Text Available Pacific electric ray Torpedo californica Chordata/Vertebrata/Pisciformes Torpedo_californica_L.png Torpedo..._californica_NL.png Torpedo_californica_S.png Torpedo_californica_NS.png http://biosc...iencedbc.jp/taxonomy_icon/icon.cgi?i=Torpedo+californica&t=L http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Torpedo...+californica&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Torpedo...+californica&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Torpedo+californica&t=NS ...
Distribution and habitat ecology of the sorediate species of Menegazzia (Parmeliaceae, lichenized Ascomycota in Chile Distribución y ecología de las especies sorediosas de Menegazzia (Parmeliaceae, Ascomycota liquenizado en Chile
JARLE W BJERKE
Full Text Available ABSTRACT The taxonomy and ecology of the sorediate species of Menegazzia from the southernmost regions of Chile and Argentina and the South Atlantic Islands was recently published, only with sporadic reports from the more northern regions. In the present work the distribution patterns and habitat ecology of the sorediate species are discussed, with emphasis on the area north of 48º S. Eleven species are treated. Menegazzia subpertusa, an epiphyte of sclerophyll scrubs, is recorded from South America for the first time (Chile and Argentina. Menegazzia neozelandica has a disjunct distribution in Chile, with occurrences in Fray Jorge (Fourth Region of Chile and on Islas Juan Fernández, and along the coast south of latitude 38º S. Menegazzia kawesqarica and M. tenuis are most common in the southernmost part of Chile, but are also found at high altitudes at lower latitudes. Additional treated species are M. chrysogaster, M. fumarprotocetrarica, M. globulifera, M. magellanica, M. norsorediata, M. sanguinascens and M. wandae. Several of the sorediate species are early colonisers of newly developed substrates. They show variable occurrences along light and humidity gradients. Distribution maps and a revised key are presented.Recientemente se han publicado datos sobre la taxonomía y ecología de las especies sorediosas de Menegazzia representadas en las regiones más australes de Chile y Argentina e islas del Atlántico Sur, además de registros esporádicos en zonas ubicadas más al norte en Chile. En este trabajo se discuten los patrones de distribución y la ecología del hábitat de 11 especies sorediosas, con especial enfásis en aquellas que se desarrollan al norte de los 48º S. Menegazzia subpertusa, un epífito de arbustos esclerófilos, se registra por primera vez en América (Chile y Argentina. Menegazzia neozelandica tiene una distribución discontinua en Chile; ha sido recolectada en Fray Jorge (Cuarta Región de Chile, Islas Juan Fern
Guarro, Josep; Gené, Josepa; Stchigel, Alberto M.
Fungal infections, especially those caused by opportunistic species, have become substantially more common in recent decades. Numerous species cause human infections, and several new human pathogens are discovered yearly. This situation has created an increasing interest in fungal taxonomy and has led to the development of new methods and approaches to fungal biosystematics which have promoted important practical advances in identification procedures. However, the significance of some data pr...
Full Text Available Japanese medaka Oryzias latipes Oryzias_latipes_L.png 219.png Taxonomy icon (c) Database Center for Life Sci...ence licensed under CC Attribution2.1 Japan アイコン:メダカ HNI-Ⅱ系統バージョン bando 2010/02/15 15:31:07 2010/02/16 09:53:27 ...
Cristiane C Thompson; Chimetto, Luciane; Edwards, Robert A.; Swings, Jean; Stackebrandt, Erko; Thompson, Fabiano L
A need for a genomic species definition is emerging from several independent studies worldwide. In this commentary paper, we discuss recent studies on the genomic taxonomy of diverse microbial groups and a unified species definition based on genomics. Accordingly, strains from the same microbial species share >95% Average Amino Acid Identity (AAI) and Average Nucleotide Identity (ANI), >95% identity based on multiple alignment genes, 70% in silico Genome-to-Genome Hybridization similarity (G...
Wen-Xiu Liu; Wei He; Ning Qin; Xiang-Zhen Kong; Qi-Shuang He; Hui-Ling Ouyang; Bin Yang; Qing-Mei Wang; Chen Yang; Yu-Jiao Jiang; Wen-Jing Wu; Fu-Liu Xu
The levels of 18 organochlorine pesticides (OCPs) in the water from Lake Chaohu were measured by a solid phase extraction-gas chromatography-mass spectrometer detector. The spatial and temporal distribution, possible sources, and potential ecological risks of the OCPs were analyzed. The annual mean concentration for the OCPs in Lake Chaohu was 6.99 ng/L. Aldrin, HCHs, and DDTs accounted for large proportions of the OCPs. The spatial pollution followed the order of Central Lakes > Western Lake...
The physical environment of the Nevada Test Site and surrounding area is described with regard to physiography, geology, soils, and climate. A discussion of plant associations is given for the Mojave Desert, Transition Desert, and Great Basin Desert. The vegetation of disturbed sites is discussed with regard to introduced species as well as endangered and threatened species. Collections of vascular plants were made during 1959 to 1975. The plants, belonging to 1093 taxa and 98 families are listed together with information concerning ecologic and geographic distributions. Indexes to families, genera, and species are included. (HLW)
Kaeriyama, M. [Hokkaido Tokai Univ., Sapporo (Japan); Urawa, S.; Fukuwaka, M. [National Salmon Resources Centre, Nakanoshima, Sapporo (Japan); Myers, K.W.; Davis, N.D. [Washington Univ., Fisheries Research Inst., Seattle, WA (United States); Takagi, S.; Ueda, H. [Hokkaido Univ., Faculty of Fisheries, Hakodate, Hokkaido (Japan); Nagasawa, K.; Ishida, Y. [National Research Inst. of Far Seas Fisheries, Shimizu, Shizuoka (Japan)
The impact of the 1997 El Nino event on the offshore distribution, migration and feeding ecology of Pacific salmon in the North Pacific Ocean and the Bering Sea, and on the return pattern of Japanese chum salmon, was studied. The run pattern of adult chum salmon showed extreme fluctuation by area and run timing. The 1997 abundance and return rate of early runs was significantly increased in the Okhotsk and Nemuro regions compared to the previous five-year means but the abundance and return rate of Japan Sea populations and some of the late runs was decreased. 5 refs., 4 figs.
The constraints of bioenergetics on the ecology and distribution of vertebrate ectotherms were quantified. During this project we conducted studies: to determine the role of incubation temperature on the post-hatching growth rate of the snapping turtle, Chelydra serpentina; to establish the rate of energy expenditure of the slider turtle, Trachemys scripta, in the field; to determine the field metabolic rates, body temperatures and selected microclimates of the box turtle, Terrapene carolina, and to measure the effect of diet type on the consumption rate, digestion rate and digestive efficiency of adult T. scripta. We also completed our research on the three-dimensional bioenergetic climate space for freshwater turtles.
Sözer, Resit; Nijman, Vincent
In the period December 1993 – January 1995 research on the behavioural ecology, distribution and conservation of the Javan Hawk-eagle Spizaetus bartelsi was carried out by R. Sözer and V. Nijman, under supervision of BirdLife International / PHPA – Indonesia Programme. This research was part of the requirements for graduation in the study of Biology at the University of Amsterdam (UVA). During the seven-month of fieldwork many new data were collected on these subjects and recommendations for ...
Bogaerts, Serge; Sparreboom, Max; Pasmans, Frank; Almasri, Aroub; Beukema, Wouter; Shehab, Adwan; Amr, Zuhair S
The distribution, ecology and conservation status of the Syrian urodeles Salamandra infraimmaculata and Ommatotriton vittatus are poorly known. We present the results of a field study, conducted in February 2009. Salamandra infraimmaculata was found at six localities, ranging from 228 to 960 m a.s.l., and co-occurred with O. vittatus at three localities. All localities were near small, clear streams or springs. Temperatures ranged from 9.4 to 16.4 degrees C, pH 7.5-8.5, GH 3-18 and KH 3-18. T...
Vos, Henk; Cowan, John
A major problem in teaching reflection is that educational objectives for reflection in terms of student behaviour are lacking. Therefore a taxonomy of reflection has been developed based on Bloom’s taxonomy. Reflective assignments can then be better focused on any chosen educational objectives. The act of reflection has been analysed and abstracted from goal, content, context, means, and moment of reflecting. Reflection was operationalised as answering reflective questions. Bloom’s taxonomy ...
Matthew B Hufford
Full Text Available BACKGROUND: The species Zea mays includes both domesticated maize (ssp. mays and its closest wild relatives known as the teosintes. While genetic and archaeological studies have provided a well-established history of Z. mays evolution, there is currently minimal description of its current and past distribution. Here, we implemented species distribution modeling using paleoclimatic models of the last interglacial (LI; ∼135,000 BP and the last glacial maximum (LGM; ∼21,000 BP to hindcast the distribution of Zea mays subspecies over time and to revisit current knowledge of its phylogeography and evolutionary history. METHODOLOGY/PRINCIPAL FINDINGS: Using a large occurrence data set and the distribution modeling MaxEnt algorithm, we obtained robust present and past species distributions of the two widely distributed teosinte subspecies (ssps. parviglumis and mexicana revealing almost perfect complementarity, stable through time, of their occupied distributions. We also investigated the present distributions of primitive maize landraces, which overlapped but were broader than those of the teosintes. Our data reinforced the idea that little historical gene flow has occurred between teosinte subspecies, but maize has served as a genetic bridge between them. We observed an expansion of teosinte habitat from the LI, consistent with population genetic data. Finally, we identified locations potentially serving as refugia for the teosintes throughout epochs of climate change and sites that should be targeted in future collections. CONCLUSION/SIGNIFICANCE: The restricted and highly contrasting ecological niches of the wild teosintes differ substantially from domesticated maize. Variables determining the distributions of these taxa can inform future considerations of local adaptation and the impacts of climate change. Our assessment of the changing distributions of Zea mays taxa over time offers a unique glimpse into the history of maize, highlighting a
ZENG Zhigao; SONG Yanling; MA Yingtai; WANG Xifeng; WU Xuntao; XIE Zhenfeng; SHAO Jianbin; LI Chunning
Niubeiliang National Nature Reserve (NNR,108°45'-109°04'E,33°47'-33°56'N)is located on the eastern range of the Qinling Mountains in Shannxi Province,China and spans the southern and northern slopes of Mt.Qiuling.A transect survey and investigation were carried out in NNR to determine the fauna characteristics and ecological distribution of carnivora and artiodactyla from May 2003 to August 2004.The NNR has 18 mammals (carnivore and artiodactyl),two of which belong to the first class and seven to the second class of state key protected wildlife in China.The results of this study indicated that ungulates were abundant in the NNR,as all ungulates that were distributed within bit.Qiuling could be found within the reserve.However,only45.5%of the carnivores distributed within Mt.Qinling were detected within the NNR.Among the mammals,there were 12 oriental species (66.7%),1 palearctic specie (5.5%)and 5 widely-distributed species (27.8%).The NNR is a crossing area of palearctic species and oriental species on the zoogeographical regions,and it is a transitional area from the oriental realm to the palearctic realm.The results of the analysis on the ecological distribution of carnivore and artiodactyl in the area showed that their elevation ranges had large differences.The species whose elevation ranges above 1300 m,about 1000 m,and in 450-700 m occupied one third respectively.The results also indicated that species richness for the mammals in the NNR peaked at a middle elevation (rising at first,then descending with the increase in elevation).Not only on the southern slope,but also on the northern slope of Mt.Qinling,the number of species distributed in the area at 1800-2200 m a.s.l.was the largest (more than 80%),while the number of species distributed in the area above 2 600 m a.s.l.was the smallest (about 50%).Elevation gradients of species richness for the mammals in the NNR also embodied the mammal distributions among the vegetation types.The number of species
Full Text Available Taxonomically, the Mollusca of the southern end of South America are moderately well known, but the literature is scattered, there is little information on their habitats, and distributional records are scarce for the Chilean archipelago lying between Chiloé Island (42° S and Tierra del Fuego (55° S. Although much is known about the biology and ecology of of some species of Nacellidae, the taxonomy of the group have been partially neglected, particularly in remote areas of the world such as the Chilean fjords. Therefore, this study aims to clarify the nomenclatural status, and establish the morphological characteristics and distribution of the Chilean Nacellidae. Especially, the following three objectives are pursued: (i to clarify the correct identity of existing species; (ii to describe of morphological details, highlighting the clear diagnostic characters of each species, and (iii to delimitate and discuss their geographical range in Chile. The examination of the Nacellidae of the Chilean fiords has resulted in the recognition of one species of Nacella (Nacella and seven species of Nacella (Patinigera, wherein the principal specific differences are in the shell (shape, thickness and color and in radular teeth morphology. The genus Nacella and its subgenus Patinigera are cold-water limpets, and are exclusively inhabitants of Subantarctic and Antarctic waters. The greater part of their range being subantarctic, but extending to the Antarctic by way of the Scotia Arc, and also ranging northward up the Chilean coast to at least Valparaiso at 33° S (only N. (P. clypeater. They apparently have their centre of distribution in the Magellanic Province of southern South America, corresponding to an area with a high degree of diversification (N. (N. mytilina, N. (P. chiloensis, N. (P. deaurata, N. (P. delicatissima, N. (P. flammea, N. (P. magellanica, N. (P. venosa, wherefrom the species tends to spread eastward, with a larval transport probably
Mohammad Amin Ghatee
Full Text Available Background & objectives: Leishmaniasis as a dynamic disease may be markedly influenced by demographic and ecological factors. A geospatial information system study was developed to determine the distribution of visceral leishmaniasis (VL cases in relation to population, climatic and environmental factors in Fars province, southwest of Iran. Methods: The dwelling addresses of 217 VL patients were obtained from hospital files. A hazard map produced by unifying buffers (5 km around nomads travel routes (NTR was developed to survey the effect of close proximity to NTR on the distribution of VL. Mean annual rainfall (MAR, mean annual temperature (MAT, four months temperature mean (T4, elevation, slope and landcover were climatic and environmental factors that have been analysed. Finally, data of dwelling foci were extracted from maps and analysed using logistic regression models. Results: Close proximity to NTR was the most important factor influenced on the disease distribution. Climatic factors were in second rank. Among them, temperature especially T4 is the most effective variable and rainfall was also shown to be another effective climatic agent. Most cases of VL were reported from temperate and semiarid areas in western and central regions while arid condition was a confined factor. The environmental factor of landcovers including urban, dry farm and thin forest regions was revealed as the third rank effective factor. Altitude importance was only shown when its effect was studied independently from other factors. Interpretation & conclusion: These findings present the distribution of VL in Fars province is influenced by combination of ecological and nomads demographical variables although closeness to NTR and nomads role in distribution and continuance of kala-azar are the most important factors.
Full Text Available Phytoplankton species are an important basis of the food web for various systems such as pelagic, coastal and lake. Due to their photosynthetic capacity, this community is sensitive to changes in light availability, temperature, nutrient concentrations, herbivores consumption, parasitism and competition. Therefore, they show a high spatial and temporal variability related to environmental changes both natural and anthropogenic. However, as any taxonomic group, phytoplankton species have environmental thresholds, ecological niches that define their distribution. This study was located in Aguamilpa Dam, an artificial aquatic reservoir which started operations in 1994 for electric energy production. In this system the potential distribution of the phytoplankton was evaluated, where the highest species richness and restricted distribution areas were identified. Potential distribution models based on ecological niche definition were generated using ArcMap 9.2® with Maxent (Maximun Entropy Method. The development of distribution maps was carried out using Digital Elevation Models in cells of 100 m x 100 m (1 ha, based on nine physico-chemical and biological water parameters monitored in the reservoir. The highest species richness areas were found in the Huaynamota river tributary and at the station called La Confluencia, while the less abundance areas were found in the Santiago river tributary during warm and cold dry seasons with a great abundance of cyanophyta. During the rainfall season, the Huaynamota river tributary diversity areas were extended and the presence of some dominant species of cyanophyta were indentified. These species can be associated with trophic processes related to anthropogenic pollutants in the reservoir. This study illustrates the potential application of niche modeling approach in aquatic ecosystems.
Hu Jianzhong; Zhen Jiali; Shen Jingyu
In the implementation phase of the Conversion of Cropland to Forest and Grassland (CCFG) project in China,it is important,from a scientific point of view,to recognize phytocommunities' characteristics,species compatibility,and ecological function.The ecological niche that roots occupy,their abundance and distribution,and the factors that affect them must be acknowledged.Following the methodology of community ecology,the total root mass of a phytocommunity is measured as cubic volume.Root biomass,length,and the number of roots in every diameter class,for each soil layer and for each plant species,are regarded as observation variables.In the first instance therefore,a new method to calculate the root ecological niche index (REND is proposed,embracing the entire phytocommunity of plantations.Using the new method,the roots of pbytocommunities in Datong County,Qinghai Province (one of the counties selected for the national CCFG experiment),are dealt with in this paper.The results show that most of the vertical distributions of plant roots belong to the type wherein the roots are concentrated in the topsoil layer (0-20 cm),far more than those in the lower soil layers.The RENI of pbytocommunities is higher than that of pure stands or monocultures.The distribution of RENI by root diameter can be divided into four types:J-type,inverse J-type,recumbent S-type,and U-type.RENI is positively correlated with the wet biomass of aboveground level stems,branches,and plant leaves,and with the species richness of phytocommunities.Although the RENIs of plantations in rehabilitated fields are a little lower than those of natural forests,they are higher than those of cultivated crops.The RENIs of three community types (Picea crassifolia+Hippophae rhamnoides ssp.sinensis,H.rhamnoides ssp.sinensis,and P.crassifolia) in rehabilitated fields benefit greatly from the restoration project.The implementation of the CCFG project is important for the increase in RENI and the multiple functions of
Distribution pattern, ecology and endemism of family Crassul aceae have been studied in Pakistan and Kashmir. Out of 31 taxa, 15 are Irano-Turanian elements, 16 are Sino-Japanese elements and only one is Mediterranean element. Twenty nine taxa are classified as uniregional, while one is biregional element. Only one taxon is considered as pluriregional element. Rhodiola saxifragoides, Rosularia adenotricha subsp. chitralica and Hylotelephium pakistanicum are endemic taxa. While Rhodiola pachyclados and Rosularia sedoides are partim endemic. The former species is confined to (Kurrum valley) Pakistan and Afghanistan whereas the latter species distributed in Kashmir and N India. Rhodiola coccinea subsp. scabrida is subendemic to the peripheral belt of Irano-Turanian and Sino-Japanese regions. (author)
Full Text Available The golden jackal is a medium-sized predator and omnivore, with a range covering the southern parts of the Palearctic, South Asia and northeastern Africa. The entire jackal population is now confined to a few clusters grouped into 7 sub-areas with criteria such as connectivity and isolation. Causes of decline seem to be related to the limited habitat availability due to changes in human agro-pastoral activities, which resulted mainly in reduced day-cover availability and possibly reduced food base. This review summarizes the basic aspects of golden jackal distribution, ecology and dietary habits, analyses the main threats and problems of jackal management. The jackals seem to do well in moderately modified agro-systems with non- invasive human activities. Barriers for jackal expansion and population recovery seems to be the mountains with extensive high forests or unbroken scrub, heavy snowy winters and irregular food supply, large intensively cultivated areas without cover, urbanization and established wolf populations. Agro pastoral changes during the past 25-30 years has resulted in habitat and human use changes, which have largely contributed to the massive jackal population declines. Following a short introduction on phylogeny, classification, and evolutionary ecology of the Canidae, this review provides the latest information on the distribution, biology and conservation status of Canid aureus species, organized by geographical region.
Full Text Available Although Brazil was declared free from Chagas disease transmission by the domestic vector Triatoma infestans, human acute cases are still being registered based on transmission by native triatomine species. For a better understanding of transmission risk, the geographic distribution of Brazilian triatomines was analyzed. Sixteen out of 62 Brazilian species that both occur in >20 municipalities and present synanthropic tendencies were modeled based on their ecological niches. Panstrongylus geniculatus and P. megistus showed broad ecological ranges, but most of the species sort out by the biome in which they are distributed: Rhodnius pictipes and R. robustus in the Amazon; R. neglectus, Triatoma sordida, and T. costalimai in the Cerrado; R. nasutus, P. lutzi, T. brasiliensis, T. pseudomaculata, T. melanocephala, and T. petrocchiae in the Caatinga; T. rubrovaria in the southern pampas; T. tibiamaculata and T. vitticeps in the Atlantic Forest. Although most occurrences were recorded in open areas (Cerrado and Caatinga, our results show that all environmental conditions in the country are favorable to one or more of the species analyzed, such that almost nowhere is Chagas transmission risk negligible.
As one of the most important biological factors that maintain the stability of the largest fixed and semi-fixed desert in China,the Gurbantunggut Desert,the biological soil crusts (BSCs) develop well and play critical ecological roles in the desert ecosystem. In this paper,we briefly summarize our research findings since 2002 including species composition,distribution pattern and ecological functions of BSCs in the desert. Our results indicate abundant species diversity of BSCs in the Gurbantunggut Desert in comparison to other deserts in China. At the scales of sand dune or whole desert,the distribution patterns of BSCs are location-specific. The existence of BSCs in this desert could:(1) accelerate the formation of desert soil and the weathering of minerals; (2) accumulate organic matter in surface soil through related species in soil crusts; (3) enhance the abilities of sand surface to resist wind erosion; (4) influence seed germination of vascular plants; and (5) enhance the production of dew deposition on sandy soil surface.
The distribution, sources and ecological risk of heavy metals in surface sediments from Lake Taihu were studied. Results showed that the measured heavy metals had varied spatial distribution patterns, indicating that they had complex origins and controlling factors. Pearson's correlation analysis revealed that the total phosphorus and the loss on ignition were positively correlated with the measured metals except Cd. Principal component analysis and cluster analysis demonstrated that Hg, Cu, Cr, Cd and Pb might originate from domestic sewage and industrial wastewater, whereas As predominantly originated from natural processes. Potential ecological risk indices indicated that sediment from Wuli Lake, Gonghu Bay and the Northwest Area suffered high pollution, whereas other areas of Lake Taihu were moderately polluted. A comparison of metal levels with the effects range low (ERL) and effects range median (ERM) showed that metals exceeded their corresponding ERL limit at 13.6–72.3% (72.3% for As, 52.4% for Pb, 27.7% for Cu, 22.8% for Cd, 16.0 for Hg and 13.6% for Cr) of the sites investigated. Moreover, 3.90% and 0.50% of the sites sampled exceeded the ERM thresholds for Hg and Pb, respectively.
WU Yanyou; LI Pingping; HAO Jianchao; WU Chundu; FU Weiguo
The Mt. Beigu wetland, which has undergone periodical changes in water level, lies by the Yangtze River, and its dominant plants are Phragmites communis, Phalaris arundinacea and Polygonum lapathifolium. In order to study the distribution characteristics of nitrogen and phosphorus in the ecological system of the Mt. Beigu wetland, the authors measured the contents of total nitrogen and total phosphorus in Phragmites communis, Phalaris arundinacea and Polygonum lapathifolium, and the contents of nitrogen and phosphorus in the wetland soils with different plant species. In addition the authors investigated the influence of various plants on the spatial and seasonal (spring/autumn) distributions of nitrogen and phosphorus in the wetland soil. The contents of nitrogen and phosphoms in Phalaris arundinacea are significantly higher than those of the other two plant species in the same part. Secondary pollution of phosphorus in the wetland results mainly from Phalaris arundinacea. Phragmites com-munis effectively carries away nitrogen and phosphorus in the wetland soil in the wet season. The capacity of Poly-gonum lapathifolium to remove nitrogen is lowest among the 3 species of plants. These findings offer a theoretical foundation for the selection of plant species to restore the ecological environment and for the selection of time and depth for purging silt on the riverside wetland.
Full Text Available Synechocystis_sp_PCC_6803_NL.png Synechocystis_sp_PCC_6803_S.png Synechocystis_sp_PCC_6803_NS.png http://biosciencedbc.jp/taxonomy..._icon/icon.cgi?i=Synechocystis+sp%2ePCC+6803&t=L http://biosciencedbc.jp/taxonomy_ico...n/icon.cgi?i=Synechocystis+sp%2ePCC+6803&t=NL http://biosciencedbc.jp/taxonomy_ic...on/icon.cgi?i=Synechocystis+sp%2ePCC+6803&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Synechocystis...+sp%2ePCC+6803&t=NS http://togodb.biosciencedbc.jp/togodb/view/taxonomy_icon_comment_en?species_id=69 ...
Sandel, Brody Steven
why? I argue that this is likely to be a productive way forward for ecology, but that progress in this direction is currently hindered by the conflation of a set of distinct concepts under the category of ‘scale-dependence’. Here, I propose a taxonomy of spatial scale-dependence that categorizes its......-dependence (the class). I illustrate the need for these distinctions with a set of examples demonstrating causes of different types of scale-dependence. I then describe how this taxonomy relates to an array of scale-related concepts from other fields. Finally, I discuss the generalization that biotic interactions...... are most important at small scales in light of this taxonomy....
In today's environment, computers and networks are increasing exposed to a number of software vulnerabilities. Information about these vulnerabilities is collected and disseminated via various large publicly available databases such as BugTraq, OSVDB and ICAT. Each of these databases, individually, do not cover all aspects of a vulnerability and lack a standard format among them, making it difficult for end-users to easily compare various vulnerabilities. A central database of vulnerabilities has not been available until today for a number of reasons, such as the non-uniform methods by which current vulnerability database providers receive information, disagreement over which features of a particular vulnerability are important and how best to present them, and the non-utility of the information presented in many databases. The goal of this software vulnerability taxonomy consolidation project is to address the need for a universally accepted vulnerability taxonomy that classifies vulnerabilities in an unambiguous manner. A consolidated vulnerability database (CVDB) was implemented that coalesces and organizes vulnerability data from disparate data sources. Based on the work done in this paper, there is strong evidence that a consolidated taxonomy encompassing and organizing all relevant data can be achieved. However, three primary obstacles remain: lack of referencing a common ''primary key'', un-structured and free-form descriptions of necessary vulnerability data, and lack of data on all aspects of a vulnerability. This work has only considered data that can be unambiguously extracted from various data sources by straightforward parsers. It is felt that even with the use of more advanced, information mining tools, which can wade through the sea of unstructured vulnerability data, this current integration methodology would still provide repeatable, unambiguous, and exhaustive results. Though the goal of coalescing all available data
LIN Cai; LIU Yang; LI Wenquan; SUN Xiuwu; JI Weidong
Based on the survey of surface sediment in Xiamen Bay in October 2011, the speciation, distribution, and potential ecological risk assessment of heavy metals (Cu, Pb, Zn, Cd, and Cr) in this area were studied us-ing the sequential extraction method and ecological risk assessment method. The results indicated:(1) the total concentrations of these heavy metals were influenced by runoff, industrial wastewater, and sewage, and were all higher in the coastal area than the offshore area while the highest area of Pb was a little far-ther away from the coastal water due to atmosphere deposition;(2) sequential extractions suggested that Cu was mainly composed with residual and Fe/Mn-oxide bound fractions, Pb was bound to Fe/Mn-oxide, Zn and Cr were dominated by residual, and Cd bound to exchangeable and carbonate fractions; (3) the order of migration and transformation sequence was Cd>Pb>Cu>Zn>Cr and the degree of pollution was Cd>Pb>Cu>Zn>Cr;and (4) the ratios of the secondary and primary phases showed that Zn and Cr were both clean, Cu may be polluted, Pb was moderately polluted, while Cd was heavily polluted.
Batzer, D.; Palik, B.
Seasonal woodland ponds are important landscape features across much of eastern and central North America. Learning more about the ecology of these habitats is a pressing need in the US because federal protections are being reduced. Further, the fates of these habitats are not being monitored because most are too small for inclusion in the National Wetland Inventory. In our northern Minnesota study area, the distribution of seasonal woodland ponds is strongly influenced by glacial landform, with most ponds being associated with ground or end moraines. The habitats support an abundance of plants, invertebrates, and amphibians; these organisms are well adapted for the variable environments existing in ponds and they posses a durability that makes them resistant to most natural variation in conditions. Because of the small size of seasonal woodland ponds, input of plant litter and migration of invertebrates from the surrounding forest into ponds is an important ecological link. However, because ponds support an autochthonous growth of wetland trees, the relationship between ponds and the forest differs from that between streams and forests. Like eastern streams, logging of forests around ponds is a concern, but impacts of peripheral logging on theses wetlands appear less dramatic than for streams.
Chisholm, Ryan A.; Pacala, Stephen W.
A fundamental challenge in ecology is to understand the mechanisms that govern patterns of relative species abundance. Previous numerical simulations have suggested that complex niche-structured models produce species abundance distributions (SADs) that are qualitatively similar to those of very simple neutral models that ignore differences between species. However, in the absence of an analytical treatment of niche models, one cannot tell whether the two classes of model produce the same patterns via similar or different mechanisms. We present an analytical proof that, in the limit as diversity becomes large, a strong niche model give rises to exactly the same asymptotic form of SAD as the neutral model, and we verify the analytical predictions for a Panamanian tropical forest data set. Our results strongly suggest that neutral processes drive patterns of relative species abundance in high-diversity ecological communities, even when strong niche structure exists. However, neutral theory cannot explain what generates high diversity in the first place, and it may not be valid in low-diversity communities. Our results also confirm that neutral theory cannot be used to infer an absence of niche structure or to explain ecosystem function. PMID:20733073
Mattiucci S.; Nascetti G.
Advances in the taxonomy and ecological aspects concerning geographical distribution and hosts of the so far genetically recognised nine taxa of the nematodes belonging to genus Anisakis (i.e. A. pegreffii, A. simplex s.s., A. simplex C, A. typica, A. ziphidarum, Anisakis sp., A. physeteris, A. brevispiculata and A. paggiae) are here summarized. Genetic differentiation and phylogenetic relationships inferred from allozyme (20 enzyme-loci) and mitochondrial (sequences of cox-2 gene) markers, a...
Garnett, Stephen T.; Duursma, Daisy E.; Ehmke, Glenn; Guay, Patrick-Jean; Stewart, Alistair; Szabo, Judit K.; Weston, Michael A; Bennett, Simon; Crowley, Gabriel M.; Drynan, David; Dutson, Guy; Fitzherbert, Kate; Donald C Franklin
We introduce a dataset of biological, ecological, conservation and legal information for every species and subspecies of Australian bird, 2056 taxa or populations in total. Version 1 contains 230 fields grouped under the following headings: Taxonomy & nomenclature, Phylogeny, Australian population status, Conservation status, Legal status, Distribution, Morphology, Habitat, Food, Behaviour, Breeding, Mobility and Climate metrics. It is envisaged that the dataset will be updated periodically w...
Full Text Available Our research into 52 profiles of the littoral zone of the Macedonian part of Lake Ohrid and numerous samples taken from its surroundings has resulted in a detailed picture of the composition of the Charophyta vegetation in the lake. The results of the research also include data regarding the species composition and present state of Nitella. The dominant species of Nitella is Nitella opaca, which is characterized by a specific distribution, morphological variability and ecology. The present state of Nitella is not steady, especially in the watershed of the lake, since in this area there are some permanent changes in the hydrology of the terrain. Therefore, there is a need to establish long-term and complex monitoring which will result in the prompt detection of risk factors and influences, thereby enabling a rapid reaction to a possible newly emerged negative state.
Soil animal communities of Secondary forest, Platycladus forest and Quercus acutissima forest in Confucian graveyard of Qufu were investigated. 3583 specimens were collected, belonging separately to 5 Phylums, 11 Classes and 23 Orders. Two dominant groups and 9 common groups account for 94.45% of the total numbers. The soil animals in these three forest habitats differ in composition, ecological distribution and important indices. The dominant groups of soil animals in the three forests were the same, but other groups differ more greatly. Diversity index (H') and evenness index (E) of soil animal in Secondary forest are the highest, and yet dominance index (C) in Quercus acutissima foerst is the highest. Most soil animals in each forest habitats congregate to the surface soil layer. Their sorts and individual numbers are all layer Ⅰ＞Ⅱ＞Ⅲ. It is very similar for composition of soil animals in the three forests.
Hülber, Karl; Sonnleitner, Michaela; Flatscher, Ruth; Berger, Andreas; Dobrovsky, Rainer; Niessner, Sophie; Nigl, Thomas; Schneeweiss, Gerald M.; Kubešová, Magdalena; Rauchová, Jana; Suda, Jan; Schönswetter, Peter
In order to uncover patterns and processes of segregation of co-existing cytotypes, we investigated a zone in the eastern Alps (Austria) where diploid and hexaploid individuals of the alpine herb Senecio carniolicus Willd. (Asteraceae) co-occur. Linking the fine-scale distribution of cytotypes to environmental and spatial factors revealed segregation along an ecological gradient, which was also reflected in the cytotype-associated plant assemblages. Compared to diploids, hexaploids are found in more species-rich and denser communities. This may be due to their better competitive ability and lower tolerance of abiotic stress compared to the diploids. The lack of any intermediate cytotypes suggests the presence of strong reproductive isolation mechanisms, whose nature is, however, elusive. PMID:22318659
Full Text Available Philippine flying lemur Cynocephalus volans Chordata/Vertebrata/Mammalia/Theria/Eutheria/etc. Cynoceph...alus_volans_L.png Cynocephalus_volans_NL.png Cynocephalus_volans_S.png Cynocephalus_volan...s_NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cynocephalus+volans&t=L http://biosciencedbc.jp/ta...xonomy_icon/icon.cgi?i=Cynocephalus+volans&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cynoceph...alus+volans&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Cynocephalus+volans&t=NS ...
Full Text Available African savanna elephant Loxodonta africana Chordata/Vertebrata/Mammalia/Theria/Eutheria/etc. Loxodonta_afri...cana_L.png Loxodonta_africana_NL.png Loxodonta_africana_S.png Loxodonta_africana_NS....png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Loxodonta+africana&t=L http://biosciencedbc.jp/taxonom...y_icon/icon.cgi?i=Loxodonta+africana&t=NL http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Loxodonta+afric...ana&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Loxodonta+africana&t=NS ...
Varanka, Dalia E.
Using legacy feature lists from the U.S. National Topographic Mapping Program of the twentieth century, a taxonomy of features is presented for purposes of developing a national topographic feature ontology for geographic mapping and analysis. After reviewing published taxonomic classifications, six basic classes are suggested; terrain, surface water, ecological regimes, built-up areas, divisions, and events. Aspects of ontology development are suggested as the taxonomy is described.
Full Text Available Abstract Background Vibrio taxonomy has been based on a polyphasic approach. In this study, we retrieve useful taxonomic information (i.e. data that can be used to distinguish different taxonomic levels, such as species and genera from 32 genome sequences of different vibrio species. We use a variety of tools to explore the taxonomic relationship between the sequenced genomes, including Multilocus Sequence Analysis (MLSA, supertrees, Average Amino Acid Identity (AAI, genomic signatures, and Genome BLAST atlases. Our aim is to analyse the usefulness of these tools for species identification in vibrios. Results We have generated four new genome sequences of three Vibrio species, i.e., V. alginolyticus 40B, V. harveyi-like 1DA3, and V. mimicus strains VM573 and VM603, and present a broad analyses of these genomes along with other sequenced Vibrio species. The genome atlas and pangenome plots provide a tantalizing image of the genomic differences that occur between closely related sister species, e.g. V. cholerae and V. mimicus. The vibrio pangenome contains around 26504 genes. The V. cholerae core genome and pangenome consist of 1520 and 6923 genes, respectively. Pangenomes might allow different strains of V. cholerae to occupy different niches. MLSA and supertree analyses resulted in a similar phylogenetic picture, with a clear distinction of four groups (Vibrio core group, V. cholerae-V. mimicus, Aliivibrio spp., and Photobacterium spp.. A Vibrio species is defined as a group of strains that share > 95% DNA identity in MLSA and supertree analysis, > 96% AAI, ≤ 10 genome signature dissimilarity, and > 61% proteome identity. Strains of the same species and species of the same genus will form monophyletic groups on the basis of MLSA and supertree. Conclusion The combination of different analytical and bioinformatics tools will enable the most accurate species identification through genomic computational analysis. This endeavour will culminate in
Phan, Isabelle; Pilbout, Sandrine; Fleischmann, Wolfgang; Bairoch, Amos Marc
NEWT is a new taxonomy portal to the SWISS-PROT protein sequence knowledgebase. It contains taxonomy data, which is updated daily, for the complete set of species represented in SWISS-PROT, as well as those stored at the NCBI. Users can navigate through the taxonomy tree and access corresponding SWISS-PROT protein entries. In addition, a manually curated selection of external links allows access to specific information on selected species. NEWT is available at http://www.ebi.ac.uk/newt/.
Phan, I Q H; Pilbout, S F; Fleischmann, W; Bairoch, A
NEWT is a new taxonomy portal to the SWISS-PROT protein sequence knowledgebase. It contains taxonomy data, which is updated daily, for the complete set of species represented in SWISS-PROT, as well as those stored at the NCBI. Users can navigate through the taxonomy tree and access corresponding SWISS-PROT protein entries. In addition, a manually curated selection of external links allows access to specific information on selected species. NEWT is available at http://www.ebi.ac.uk/newt/. PMID:12824428
Sujatha R; Bandaru Rama krishna Rao
For any information to be organized, taxonomy is essential. Taxonomy plays a very important role for information and content management. Also it helps in searching of content. The most common method forconstructing taxonomy was the manual construction. As the information available today is huge, constructing taxonomy for such information manually was time consuming and maintenance was difficult. This paperpresents an overview of various taxonomy construction techniques available for easier co...
On, Stephen L.W.
The taxonomy of the genus Campylobacter has changed dramatically since its inception in 1963. At that time the genus comprised just two species. At present, taxa that were once assigned to Campylobacter may belong to one of over 50 species distributed among six genera. Most of these taxa belong t...... identification of the bacteria; and speculate on future prospects for campylobacterial taxonomy....
Rakhshani, E.; Starý, Petr; Pérez Hidalgo, N.; Čkrkić, J.; Ghafouri Moghaddam, M.; Tomanović, S.; Petrović, A.; Tomanović, Ž.
Roč. 3905, č. 4 (2015), s. 474-488. ISSN 1175-5326 Grant ostatní: Ministry of Education and Science of the Republic of Serbia (RS) III43001; Ministry of Education and Science of the Republic of Serbia (RS) ON173006; University of Zabol(IR) 89-9198 Institutional support: RVO:60077344 Keywords : Monoctonia japonica * Eriosomatinae * COI Subject RIV: EH - Ecology, Behaviour Impact factor: 0.906, year: 2014
Alassane S Barro
Full Text Available The ecology and distribution of B. anthracis in Australia is not well understood, despite the continued occurrence of anthrax outbreaks in the eastern states of the country. Efforts to estimate the spatial extent of the risk of disease have been limited to a qualitative definition of an anthrax belt extending from southeast Queensland through the centre of New South Wales and into northern Victoria. This definition of the anthrax belt does not consider the role of environmental conditions in the distribution of B. anthracis. Here, we used the genetic algorithm for rule-set prediction model system (GARP, historical anthrax outbreaks and environmental data to model the ecological niche of B. anthracis and predict its potential geographic distribution in Australia. Our models reveal the niche of B. anthracis in Australia is characterized by a narrow range of ecological conditions concentrated in two disjunct corridors. The most dominant corridor, used to redefine a new anthrax belt, parallels the Eastern Highlands and runs from north Victoria to central east Queensland through the centre of New South Wales. This study has redefined the anthrax belt in eastern Australia and provides insights about the ecological factors that limit the distribution of B. anthracis at the continental scale for Australia. The geographic distributions identified can help inform anthrax surveillance strategies by public and veterinary health agencies.
Barro, Alassane S; Fegan, Mark; Moloney, Barbara; Porter, Kelly; Muller, Janine; Warner, Simone; Blackburn, Jason K
The ecology and distribution of B. anthracis in Australia is not well understood, despite the continued occurrence of anthrax outbreaks in the eastern states of the country. Efforts to estimate the spatial extent of the risk of disease have been limited to a qualitative definition of an anthrax belt extending from southeast Queensland through the centre of New South Wales and into northern Victoria. This definition of the anthrax belt does not consider the role of environmental conditions in the distribution of B. anthracis. Here, we used the genetic algorithm for rule-set prediction model system (GARP), historical anthrax outbreaks and environmental data to model the ecological niche of B. anthracis and predict its potential geographic distribution in Australia. Our models reveal the niche of B. anthracis in Australia is characterized by a narrow range of ecological conditions concentrated in two disjunct corridors. The most dominant corridor, used to redefine a new anthrax belt, parallels the Eastern Highlands and runs from north Victoria to central east Queensland through the centre of New South Wales. This study has redefined the anthrax belt in eastern Australia and provides insights about the ecological factors that limit the distribution of B. anthracis at the continental scale for Australia. The geographic distributions identified can help inform anthrax surveillance strategies by public and veterinary health agencies. PMID:27280981
Barro, Alassane S.; Fegan, Mark; Moloney, Barbara; Porter, Kelly; Muller, Janine; Warner, Simone; Blackburn, Jason K.
The ecology and distribution of B. anthracis in Australia is not well understood, despite the continued occurrence of anthrax outbreaks in the eastern states of the country. Efforts to estimate the spatial extent of the risk of disease have been limited to a qualitative definition of an anthrax belt extending from southeast Queensland through the centre of New South Wales and into northern Victoria. This definition of the anthrax belt does not consider the role of environmental conditions in the distribution of B. anthracis. Here, we used the genetic algorithm for rule-set prediction model system (GARP), historical anthrax outbreaks and environmental data to model the ecological niche of B. anthracis and predict its potential geographic distribution in Australia. Our models reveal the niche of B. anthracis in Australia is characterized by a narrow range of ecological conditions concentrated in two disjunct corridors. The most dominant corridor, used to redefine a new anthrax belt, parallels the Eastern Highlands and runs from north Victoria to central east Queensland through the centre of New South Wales. This study has redefined the anthrax belt in eastern Australia and provides insights about the ecological factors that limit the distribution of B. anthracis at the continental scale for Australia. The geographic distributions identified can help inform anthrax surveillance strategies by public and veterinary health agencies. PMID:27280981
Thompson, Cristiane C.; Vicente, Ana Carolina P.; Souza, Rangel C.;
BACKGROUND: Vibrio taxonomy has been based on a polyphasic approach. In this study, we retrieve useful taxonomic information (i.e. data that can be used to distinguish different taxonomic levels, such as species and genera) from 32 genome sequences of different vibrio species. We use a variety of...... tools to explore the taxonomic relationship between the sequenced genomes, including Multilocus Sequence Analysis (MLSA), supertrees, Average Amino Acid Identity (AAI), genomic signatures, and Genome BLAST atlases. Our aim is to analyse the usefulness of these tools for species identification in vibrios....... RESULTS: We have generated four new genome sequences of three Vibrio species, i.e., V. alginolyticus 40B, V. harveyi-like 1DA3, and V. mimicus strains VM573 and VM603, and present a broad analyses of these genomes along with other sequenced Vibrio species. The genome atlas and pangenome plots provide a...
Anna Flora de Novaes Pereira
Full Text Available We conducted a floristic survey of ferns within the Murici Ecological Station (remnant of the northeastern Atlantic Forest, located near the municipalities of Messias and Murici, in the state of Alagoas, Brazil. To increase knowledge of the ferns of Alagoas, we evaluated the species occurring in the study area in terms of richness, composition, geographic distribution, similarities with species in other Brazilian biomes, regional conservation status and ecological aspects. Data were obtained from field work conducted between March 2009 and September 2010. We identified 107 species of ferns, of which 19 represent new records for Alagoas. The richest families were Pteridaceae (29 species and Polypodiaceae (22 species. The richest genera were Adiantum (15 species and Thelypteris (9 species. Most of the species sampled are widely distributed throughout Brazil and the Americas. Within the context of the northeastern Atlantic Forest, 12 species were considered endangered. Concerning the ecological aspects, 88.8% of the species identified were herbaceous, 57.9% were terrestrial and 70.0% occurred in the forest interior.
Cohen, Jeremy M; Civitello, David J; Brace, Amber J; Feichtinger, Erin M; Ortega, C Nicole; Richardson, Jason C; Sauer, Erin L; Liu, Xuan; Rohr, Jason R
Humans are altering the distribution of species by changing the climate and disrupting biotic interactions and dispersal. A fundamental hypothesis in spatial ecology suggests that these effects are scale dependent; biotic interactions should shape distributions at local scales, whereas climate should dominate at regional scales. If so, common single-scale analyses might misestimate the impacts of anthropogenic modifications on biodiversity and the environment. However, large-scale datasets necessary to test these hypotheses have not been available until recently. Here we conduct a cross-continental, cross-scale (almost five orders of magnitude) analysis of the influence of biotic and abiotic processes and human population density on the distribution of three emerging pathogens: the amphibian chytrid fungus implicated in worldwide amphibian declines and West Nile virus and the bacterium that causes Lyme disease (Borrelia burgdorferi), which are responsible for ongoing human health crises. In all three systems, we show that biotic factors were significant predictors of pathogen distributions in multiple regression models only at local scales (∼10(2)-10(3) km(2)), whereas climate and human population density always were significant only at relatively larger, regional scales (usually >10(4) km(2)). Spatial autocorrelation analyses revealed that biotic factors were more variable at smaller scales, whereas climatic factors were more variable at larger scales, as is consistent with the prediction that factors should be important at the scales at which they vary the most. Finally, no single scale could detect the importance of all three categories of processes. These results highlight that common single-scale analyses can misrepresent the true impact of anthropogenic modifications on biodiversity and the environment. PMID:27247398
Dhar-Chowdhury, Parnali; Haque, C Emdad; Lindsay, Robbin; Hossain, Shakhawat
This study examined household risk factors and prevalence, abundance, and distribution of immature Aedes aegypti and Aedes albopictus, and their association with socioeconomic and ecological factors at urban zonal and household levels in the city of Dhaka, Bangladesh. During the 2011 monsoon, 826 households in 12 randomly selected administrative wards were surveyed for vector mosquitoes. Results revealed that the abundance and distribution of immature Ae. aegypti and Ae. albopictus, and pupae-per-person indices did not vary significantly among the zones with varied socioeconomic status. Of 35 different types of identified wet containers, 30 were infested, and among the 23 pupae-positive container types, nine were defined as the "most productive" for pupae including: disposable plastic containers (12.2% of 550), sealable plastic barrels (12.0%), tires (10.4%), abandoned plastic buckets (9.6%), flower tub and trays (8.5%), refrigerator trays (6.5%), plastic bottles (6.4%), clay pots (4.9%), and water tanks (1.6%). When the function of the containers was assessed, ornamental, discarded, and household repairing and reconstruction-related container categories were found significantly associated with the number of pupae in the households. The purpose of storing water and income variables were significant predictors of possession of containers that were infested by vector mosquitoes. PMID:27022149
Pignon, Baptiste; Schürhoff, Franck; Baudin, Grégoire; Ferchiou, Aziz; Richard, Jean-Romain; Saba, Ghassen; Leboyer, Marion; Kirkbride, James B; Szöke, Andrei
Previous analyses of neighbourhood variations of non-affective psychotic disorders (NAPD) have focused mainly on incidence. However, prevalence studies provide important insights on factors associated with disease evolution as well as for healthcare resource allocation. This study aimed to investigate the distribution of prevalent NAPD cases in an urban area in France. The number of cases in each neighbourhood was modelled as a function of potential confounders and ecological variables, namely: migrant density, economic deprivation and social fragmentation. This was modelled using statistical models of increasing complexity: frequentist models (using Poisson and negative binomial regressions), and several Bayesian models. For each model, assumptions validity were checked and compared as to how this fitted to the data, in order to test for possible spatial variation in prevalence. Data showed significant overdispersion (invalidating the Poisson regression model) and residual autocorrelation (suggesting the need to use Bayesian models). The best Bayesian model was Leroux's model (i.e. a model with both strong correlation between neighbouring areas and weaker correlation between areas further apart), with economic deprivation as an explanatory variable (OR = 1.13, 95% CI [1.02-1.25]). In comparison with frequentist methods, the Bayesian model showed a better fit. The number of cases showed non-random spatial distribution and was linked to economic deprivation. PMID:27189529
Full Text Available Methods derived from ecological niche modeling allow to define species distribution based on presence-only data. This is particularly useful to develop models from literature records such as available for the Anopheles dirus complex, a major group of malaria mosquito vectors in Asia. This research defines an innovative modeling design based on presence-only model and hierarchical framework to define the distribution of the complex and attempt to delineate sibling species distribution and environmental preferences. At coarse resolution, the potential distribution was defined using slow changing abiotic factors such as topography and climate representative for the timescale covered by literature records of the species. The distribution area was then refined in a second step using a mask of current suitable land cover. Distribution area and ecological niche were compared between species and environmental factors tested for relevance. Alternatively, extreme values at occurrence points were used to delimit environmental envelopes. The spatial distribution for the complex was broadly consistent with its known distribution and influencing factors included temperature and rainfall. If maps developed from environmental envelopes gave similar results to modeling when the number of sites was high, the results were less similar for species with low number of recorded presences. Using presence-only models and hierarchical framework this study not only predicts the distribution of a major malaria vector, but also improved ecological modeling analysis design and proposed final products better adapted to malaria control decision makers. The resulting maps can help prioritizing areas which need further investigation and help simulate distribution under changing conditions such as climate change or reforestation. The hierarchical framework results in two products one abiotic based model describes the potential maximal distribution and remains valid for decades
Parsons, Vickie S.; Beil, Robert J.; Terrone, Mark; Barth, Timothy S.; Panontin, Tina L.; Wales, Roxana; Rackley, Michael W.; Milne, James S.; McPherson, John W.; Dutra, Jayne E.; Shaw, Larry C.
The purpose of the Taxonomy Working Group was to develop a proposal for a common taxonomy to be used by all NASA projects in the classifying of nonconformances, anomalies, and problems. Specifically, the group developed a recommended list of data elements along with general suggestions for the development of a problem reporting system to better serve NASA's need for managing, reporting, and trending project aberrant events. The Group's recommendations are reported in this document.
Giovanni Bonanno; Nicolas Vandewalle; Mantegna, Rosario N.
We investigate sets of financial non-redundant and nonsynchronously recorded time series. The sets are composed by a number of stock market indices located all over the world in five continents. By properly selecting the time horizon of returns and by using a reference currency we find a meaningful taxonomy. The detection of such a taxonomy proves that interpretable information can be stored in a set of nonsynchronously recorded time series.
Ellberger, Emile Benjamin; Pérez, Germán Toro; Cavaliero, Linda; Schütt, Johannes; Zoia, Giorgio; Zimmermann, Basile
The SSMN Spatial Taxonomy and its symbols libraries, which are the corner stone of the Spatialization Symbolic Music Notation (SSMN) project, emanates from research into composers’ attitudes in this domain. It was conceived as the basis for the development of dedicated notation and rendering tools within the SSMN project. The taxonomy is a systematic representation of all relevant features necessary to specify sound spatiality: shape and acoustic quality of the space, structure, position and ...
Hoefer, C.N.; Karagiannis, G.
Cloud computing is a highly discussed topic, and many big players of the software industry are entering the development of cloud services. Several companies want to explore the possibilities and benefits of cloud computing, but with the amount of cloud computing services increasing quickly, the need for a taxonomy framework rises. This paper describes the available cloud computing services, and proposes a treestructured taxonomy based on their characteristics, to easily classify cloud computi...
T. Karami; Soleimani, M; H. Afrakhteh; H. Hataminejad
Extended abstract1-IntroductionInequality of green space distribution is a type of social production which by creating uneven ecological conditions in a feedback cycle plays its role on the quality of environment and intensification of imbalances inside the urban living environment. Most of the studies conducted so far have focused on the development or distribution of public green space but the truth is that public green spaces have not been the only source of urban metabolism (from the view...
Y. Erfanifard; Khosravi, E.
Evaluating the interactions of woody plants has been a major research topic of ecological investigations in arid ecosystems. Plant-plant interactions can shift from positive (facilitation) to negative (competition) depending on levels of environmental stress and determine the spatial pattern of plants. The spatial distribution analysis of plants via different summary statistics can reveal the interactions of plants and how they influence one another. An aggregated distribution indicates facil...
A. P. Palacz
Full Text Available Modeling and monitoring plankton functional types (PFTs is challenged by the insufficient amount of field measurements of ground truths in both plankton models and bio-optical algorithms. In this study, we combine remote sensing data and a dynamic plankton model to simulate an ecologically sound spatial and temporal distribution of phyto-PFTs. We apply an innovative ecological indicator approach to modeling PFTs and focus on resolving the question of diatom–coccolithophore coexistence in the subpolar high-nitrate and low-chlorophyll regions. We choose an artificial neural network as our modeling framework because it has the potential to interpret complex nonlinear interactions governing complex adaptive systems, of which marine ecosystems are a prime example. Using ecological indicators that fulfill the criteria of measurability, sensitivity and specificity, we demonstrate that our diagnostic model correctly interprets some basic ecological rules similar to ones emerging from dynamic models. Our time series highlight a dynamic phyto-PFT community composition in all high-latitude areas and indicate seasonal coexistence of diatoms and coccolithophores. This observation, though consistent with in situ and remote sensing measurements, has so far not been captured by state-of-the-art dynamic models, which struggle to resolve this "paradox of the plankton". We conclude that an ecological indicator approach is useful for ecological modeling of phytoplankton and potentially higher trophic levels. Finally, we speculate that it could serve as a powerful tool in advancing ecosystem-based management of marine resources.
Yan, Jinxia; Liu, Jingling; Shi, Xuan; You, Xiaoguang; Cao, Zhiguo
The distribution, seasonal variations and ecological risk assessment of polycyclic aromatic hydrocarbons (PAHs) in water from three estuaries in Hai River Basin of China, which has been suffering from different anthropogenic pressures, were investigated. In three estuaries, the average concentration of ΣPAHs was the lowest in Luan River estuary, followed by Hai River estuary, and the highest in Zhangweixin River estuary. There were significant seasonal variations in ΣPAHs, the concentrations of ΣPAHs were higher in November than in May and August. The composition profiles of PAHs in different sites were significantly different, and illustrated seasonal variations. Generally, 2-ring (Nap) and 3-ring PAHs (Acp, Fl and Phe) were the most abundant components at most sampling sites in three estuaries. The PAHs in three estuaries were mainly originated from pyrogenic sources. A method based on toxic equivalency factors (TEFs) and risk quotient (RQ) was proposed to assess the ecological risk of ΣPAHs, with the ecological risk of individual PAHs being considered separately. The results showed that the ecological risks caused by ΣPAHs were high in Hai River estuary and Zhangweixin River estuary, and moderate in Luan River estuary. The mean values of ecological risk in August were lower than those in November. The contributions of individual PAHs to ecological risk were different in May, August and November. 3-ring and 4-ring PAHs accounted for much more ecological risk than 2-ring, 5-ring and 6-ring, although the contributions of 5-ring and 6-ring to ecological risk were higher than these to PAHs concentrations. PMID:27209122
Past processes and events may have an important influence on contemporaneous ecological patterns, including current human impacts on landscapes and organisms. In spite of that, most of the ecological knowledge has been built upon short-term studies, which very rarely exceed one decade. Ecology and Conservation Biology have an important lack of historical approaches, a deficiency that may become a hindrance for the management of natural systems. In this talk I will present examples of how hist...
Ahmed, M.; Sapp, M.; Prior, T.; Karssen, G.; Back, M.
Nematodes represent a species rich and morphologically diverse group of metazoans inhabiting both aquatic and terrestrial environments. Their role as biological indicators and as key players in nutrient cycling has been well documented. Some groups of nematodes are also known to cause significant losses to crop production. In spite of this, knowledge of their diversity is still limited due to the difficulty in achieving species identification using morphological characters. Molecular methodology has provided very useful means of circumventing the numerous limitations associated with classical morphology based identification. We discuss herein the history and the progress made within the field of nematode systematics, the limitations of classical taxonomy and how the advent of high throughput sequencing is facilitating advanced ecological and molecular studies.
Full Text Available Ammonia-oxidizing Archaea (AOA play an important role in the oxidation of ammonia in terrestrial, marine, and geothermal habitats, as confirmed by a number of studies specifically focused on those environments. Much less is known about the ecological role of AOA in freshwaters. In order to reach a high resolution at the Thaumarchaea community level, the probe MGI-535 was specifically designed for this study and applied to fluorescence in situ hybridization and catalyzed reporter deposition (CARD-FISH analysis. We then applied it to a fine analysis of diversity and relative abundance of AOA in the deepest layers of the oligotrophic Lake Maggiore, confirming previous published results of AOA presence, but showing differences in abundance and distribution within the water column without significant seasonal trends with respect to Bacteria. Furthermore, phylogenetic analysis of AOA clone libraries from deep lake water and from a lake tributary, River Maggia, suggested the riverine origin of AOA of the deep hypolimnion of the lake.
Lee, Peter G.; Hanneman, Matt; Cheng, Ryan [Global Forest Watch Canada (Canada)
For over 200 years, energy production and consumption, along with all human activities, have been contributing to global warming. This report is part of a project that examines 10 major energy sectors to provide information on Canada's energy options in the face of climate change; this present study gives information on hydropower reservoirs and associated dams in Canada. The mapping, jurisdictional and ecological distribution of reservoirs and dams across Canada is provided herein. Canada's hydropower installations are composed of 271 large hydropower facilities covering 58,015 km2 with a capacity of 71,857 MW, accounting for 44% of Canada's total technical hydroelectric capacity. Quebec, Ontario and British Columbia are the provinces with the most large hydropower dams; 19% of the watersheds are occupied in part by hydropower reservoirs and the taiga shield, boreal shield and montane cordillera ecozones contain most of the reservoir areas. The majority of future developments are expected to be built within 5km of intact forest landscapes.
Umeh, R E; Mahmoud, A O; Hagan, M; Wilson, M; Okoye, O I; Asana, U; Biritwum, R; Ogbu-Pearce, P; Elhassan, E; Yaméogo, L; Braideo, E I; Seketeli, A
The African Programme for Onchocerciasis Control (APOC) sponsored a baseline study in Nigeria between 1998 and 1999 on the prevalence and distribution of Onchocerciasis. The randomly selected 1,064 subjects in the baseline study underwent detailed eye examination in Cross River (rain forest), Taraba (savanna) and Kogi (forest-savanna) States. This paper compares and contrasts the public health significance of ocular onchocerciasis in these ecological zones. A blindness prevalence of 2.4% was recorded in the study, onchocerciasis being responsible for 30.2% of the bilaterally blind subjects. Onchocerciasis-induced blindness prevalence was relatively high in the rain forest and forest savanna zones of Cross River and Kogi States, Cross River having the highest site-specific prevalence (50.0%), followed by Kogi (41.7%). Taraba recorded only 27.3%. Other conditions identified included glaucoma, optic nerve disease and cataract rates of which were also found to be high among the population (6.9%, 6.5 % and 8.9% respectively). Anterior segment onchocercal lesions, punctate and sclerosing keratitis were the predominant features of the infection in the savanna zone (14.1% and 6.3% respectively), while posterior segment lesions were much more common in the forest zone. The need to sustain the present efforts to control onchocerciasis through mass ivermectin treatment is recommended. PMID:21735992
We determined metal contents of co-occurring algae Padina crassa and Sargassum sp. in Port Jackson (Australia), and relationships between metal levels and the abundance of epifaunal amphipods. Copper, lead and zinc concentrations were amongst the highest yet recorded in these algae. Copper, manganese and lead concentrations were far greater in P. crassa than Sargassum sp., possibly due to the low growth of P. crassa in proximity to contaminated sediments. However, in manipulative experiments the proximity of algae to sediments did not explain these differences. The abundance of herbivorous amphipods correlated negatively with the copper content of P. crassa, but not with the lower concentrations in Sargassum sp. The greater contamination of P. crassa led to patchy distributions of metals in algal beds and recolonisation experiments showed Sargassum sp. acts as a refuge from contaminants for epifauna. The contamination of macroalgae may pose threats to epifauna in harbours around the world. - The accumulation of metals by macroalgae may pose ecological threats to herbivorous epifauna in ports and harbours worldwide
Boivin, Nicole L; Zeder, Melinda A; Fuller, Dorian Q; Crowther, Alison; Larson, Greger; Erlandson, Jon M; Denham, Tim; Petraglia, Michael D
The exhibition of increasingly intensive and complex niche construction behaviors through time is a key feature of human evolution, culminating in the advanced capacity for ecosystem engineering exhibited by Homo sapiens A crucial outcome of such behaviors has been the dramatic reshaping of the global biosphere, a transformation whose early origins are increasingly apparent from cumulative archaeological and paleoecological datasets. Such data suggest that, by the Late Pleistocene, humans had begun to engage in activities that have led to alterations in the distributions of a vast array of species across most, if not all, taxonomic groups. Changes to biodiversity have included extinctions, extirpations, and shifts in species composition, diversity, and community structure. We outline key examples of these changes, highlighting findings from the study of new datasets, like ancient DNA (aDNA), stable isotopes, and microfossils, as well as the application of new statistical and computational methods to datasets that have accumulated significantly in recent decades. We focus on four major phases that witnessed broad anthropogenic alterations to biodiversity-the Late Pleistocene global human expansion, the Neolithic spread of agriculture, the era of island colonization, and the emergence of early urbanized societies and commercial networks. Archaeological evidence documents millennia of anthropogenic transformations that have created novel ecosystems around the world. This record has implications for ecological and evolutionary research, conservation strategies, and the maintenance of ecosystem services, pointing to a significant need for broader cross-disciplinary engagement between archaeology and the biological and environmental sciences. PMID:27274046
Ferrell, Jeremy C.
As the demand for direct petroleum substitutes increases, biorefineries are poised to become centers for conversion of biomass into fuels, energy, and biomaterials. A distributed model offers reduced transportation, tailored process technology to available feedstock, and increased local resilience. Oilseeds are capable of producing a wide variety of useful products additive to food, feed, and fuel needs. Biodiesel manufacturing technology lends itself to smaller-scale distributed facilities able to process diverse feedstocks and meet demand of critical diesel fuel for basic municipal services, safety, sanitation, infrastructure repair, and food production. Integrating biodiesel refining facilities as tenants of eco-industrial parks presents a novel approach for synergistic energy and material exchanges whereby environmental and economic metrics can be significantly improved upon compared to stand alone models. This research is based on the Catawba County NC EcoComplex and the oilseed crushing and biodiesel processing facilities (capacity-433 tons biodiesel per year) located within. Technical and environmental analyses of the biorefinery components as well as agronomic and economic models are presented. The life cycle assessment for the two optimal biodiesel feedstocks, soybeans and used cooking oil, resulted in fossil energy ratios of 7.19 and 12.1 with carbon intensity values of 12.51 gCO2-eq/MJ and 7.93 gCO2-eq/MJ, respectively within the industrial ecology system. Economic modeling resulted in a biodiesel conversion cost of 1.43 per liter of fuel produced with used cooking oil, requiring a subsidy of 0.58 per liter to reach the break-even point. As subsidies continue significant fluctuation, metrics other than operating costs are required to justify small-scale biofuel projects.
Zhou, Li-Jun; Wu, Qinglong L; Zhang, Bei-Bei; Zhao, Yong-Gang; Zhao, Bi-Ying
The objective of this study was to evaluate the occurrence, spatiotemporal distribution, mass balance and ecological risks of 43 commonly used human and veterinary antibiotics in both aqueous and sedimentary phases in a large subtropical shallow lake, Lake Taihu. In the aqueous phase, sulfonamides (2.64-344 ng L(-1)), lincomycin (ND to 53.8 ng L(-1)) and florfenicol (0.15-963 ng L(-1)) were the main compounds with high concentrations and detection frequencies. In the sedimentary phase, fluoroquinolones (ND to 174 ng g(-1), dry weight) and tetracyclines (ND to 39.6 ng g(-1), dry weight) were the predominant compounds. Antibiotic concentrations in Lake Taihu were generally lower relative to data documented in previous studies on China and other countries. The composition of antibiotics showed that livestock wastewater might be the main source of antibiotics in Lake Taihu, followed by domestic wastewater. Antibiotics in the lake water showed slight spatial variation in summer and significant spatial variation in winter; whereas, antibiotic concentrations in the sediments varied obviously, with high concentrations found in the sites close to potential pollution sources. Mass balance showed that sediments are an important sink and potential source for fluoroquinolones and tetracyclines. In addition to antibiotics' physicochemical properties, the spatiotemporal distribution of antibiotics in the lake was influenced by both pollution sources and lake hydrodynamics. The environmental risk assessment results showed that sulfamethoxazole could pose high risks on the algae in the aquatic ecosystem, followed by tetracyclines (algae) and fluoroquinolones (bacteria). Overall, our study reveals complex compositions and clear spatiotemporal dynamics in Lake Taihu, which were the consequence of pollution sources and lake hydrodynamics. PMID:27048777
Thompson, Cristiane C; Chimetto, Luciane; Edwards, Robert A; Swings, Jean; Stackebrandt, Erko; Thompson, Fabiano L
A need for a genomic species definition is emerging from several independent studies worldwide. In this commentary paper, we discuss recent studies on the genomic taxonomy of diverse microbial groups and a unified species definition based on genomics. Accordingly, strains from the same microbial species share >95% Average Amino Acid Identity (AAI) and Average Nucleotide Identity (ANI), >95% identity based on multiple alignment genes, 70% in silico Genome-to-Genome Hybridization similarity (GGDH). Species of the same genus will form monophyletic groups on the basis of 16S rRNA gene sequences, Multilocus Sequence Analysis (MLSA) and supertree analysis. In addition to the established requirements for species descriptions, we propose that new taxa descriptions should also include at least a draft genome sequence of the type strain in order to obtain a clear outlook on the genomic landscape of the novel microbe. The application of the new genomic species definition put forward here will allow researchers to use genome sequences to define simultaneously coherent phenotypic and genomic groups. PMID:24365132
Lincoln José Michalski
Full Text Available Vertebrates are a vital ecological component of Amazon forest biodiversity. Although vertebrates are a functionally important part of various ecosystem services they continue to be threatened by anthropogenic impacts throughout the Amazon. Here we use a standardized, regularly spaced arrangement of camera traps within 25km2 to provide a baseline assessment of vertebrate species diversity in a sustainable use protected area in the eastern Brazilian Amazon. We examined seasonal differences in the per species encounter rates (number of photos per camera trap and number of cameras with photos. Generalized linear models (GLMs were then used to examine the influence of five variables (altitude, canopy cover, basal area, distance to nearest river and distance to nearest large river on the number of photos per species and on functional groups. GLMs were also used to examine the relationships between large predators [Jaguar (Panthera onca and Puma (Puma concolor] and their prey. A total of 649 independent photos of 25 species were obtained from 1,800 camera trap days (900 each during wet and dry seasons. Only ungulates and rodents showed significant seasonal differences in the number of photos per camera. The number of photos differed between seasons for only three species (Mazama americana, Dasyprocta leporina and Myoprocta acouchy all of which were photographed more (3 to 10 fold increase during the wet season. Mazama americana was the only species where a significant difference was found in occupancy, with more photos in more cameras during the wet season. For most groups and species variation in the number of photos per camera was only explained weakly by the GLMs (deviance explained ranging from 10.3 to 54.4%. Terrestrial birds (Crax alector, Psophia crepitans and Tinamus major and rodents (Cuniculus paca, Dasyprocta leporina and M. acouchy were the notable exceptions, with our GLMs significantly explaining variation in the distribution of all
Full Text Available Abstract Background Taxonomy is the biological discipline that identifies, describes, classifies and names extant and extinct species and other taxa. Nowadays, species taxonomy is confronted with the challenge to fully incorporate new theory, methods and data from disciplines that study the origin, limits and evolution of species. Results Integrative taxonomy has been proposed as a framework to bring together these conceptual and methodological developments. Here we review perspectives for an integrative taxonomy that directly bear on what species are, how they can be discovered, and how much diversity is on Earth. Conclusions We conclude that taxonomy needs to be pluralistic to improve species discovery and description, and to develop novel protocols to produce the much-needed inventory of life in a reasonable time. To cope with the large number of candidate species revealed by molecular studies of eukaryotes, we propose a classification scheme for those units that will facilitate the subsequent assembly of data sets for the formal description of new species under the Linnaean system, and will ultimately integrate the activities of taxonomists and molecular biologists.
Full Text Available three-spined stickleback Gasterosteus aculeatus Chordata/Vertebrata/Pisciformes Gasteros...teus_aculeatus_L.png Gasterosteus_aculeatus_NL.png Gasterosteus_aculeatus_S.png Gasterosteus_aculeatus_...NS.png http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Gasterosteus+aculeatus&t=L http://biosciencedbc.jp/t...axonomy_icon/icon.cgi?i=Gasterosteus+aculeatus&t=NL http://biosciencedbc.jp/taxon...omy_icon/icon.cgi?i=Gasterosteus+aculeatus&t=S http://biosciencedbc.jp/taxonomy_icon/icon.cgi?i=Gasterosteus+aculeatus&t=NS ...
Samoila, Cornel; Ursutiu, Doru; Cotfas, Petru; Zamfira, Sorin
Taxonomy is a classification effort for establishment of learning/teaching operational objectives. There are some famous taxonomies, Bloom's being the most quoted. In spite of the fact that some researchers have tried to explain the position of elearning in already known taxonomies, this subject was not too much in the general attention. In the paper the authors intend to go deeply and to analyze the position of the new methodology-remote experiment-in the actual taxonomies. In addition they ...
Groth, Pernille; Nielsen, Christian
Abstract Purpose: The paper proposes a research design recipe capable of leading to future business model taxonomies and discusses the potential benefits and implications of achieving this goal. Design/Methodology/Approach: The paper provides a review of relevant scholarly literature about business...... models to clarify the subject as well as highlighting the importance of past studies of business model classifications. In addition it reviews the scholarly literature on relevant methodological approaches, such as cluster analysis and latent class analysis, for constructing a business model taxonomy....... The two literature streams combined to form the basis for the suggested recipe. Findings: The paper highlights the need for further large-scale empirical studies leading to a potential business model taxonomy, a topic that is currently under-exposed even though its merits are highlighted continuously...
Longino Contoli; Gaetano Aloise
Abstract The paper examines the taxonomic status of North African Crocidura russula Auctorum. On the basis of morphological data, the taxon needs to be divided into at least two species: C. russula (Hermann, 1780) from western Europe, coastal Morocco and middle-western Algeria, up to about the Algiers area, and possibly even Sardinia and Ibiza, and another species, distributed in coastal middle-eastern Algeria, Tunisia, P...
project is to investigate how and how well non-professional users actually understand GI. For that purpose a taxonomy of GI knowledge is built, drawing on Bloom`s taxonomy. The elements of this taxonomy are described after a presentation of the main research question of the study, the applications chosen...
Kjærgaard, Mikkel Baun
good frameworks for understanding different options when building LF systems. This paper proposes a taxonomy to address both of these problems. The proposed taxonomy has been constructed from a literature study of 51 papers and articles about LF. For researchers the taxonomy can also be used as an aid...
Jackson, S.T.; Betancourt, J.L.; Booth, R.K.; Gray, S.T.
Climate change in the coming centuries will be characterized by interannual, decadal, and multidecadal fluctuations superimposed on anthropogenic trends. Predicting ecological and biogeographic responses to these changes constitutes an immense challenge for ecologists. Perspectives from climatic and ecological history indicate that responses will be laden with contingencies, resulting from episodic climatic events interacting with demographic and colonization events. This effect is compounded by the dependency of environmental sensitivity upon life-stage for many species. Climate variables often used in empirical niche models may become decoupled from the proximal variables that directly influence individuals and populations. Greater predictive capacity, and morefundamental ecological and biogeographic understanding, will come from integration of correlational niche modeling with mechanistic niche modeling, dynamic ecological modeling, targeted experiments, and systematic observations of past and present patterns and dynamics.
US Fish and Wildlife Service, Department of the Interior — In May 1985 fieldwork was initiated at Kokechik Bay, Alaska to collect information on the ecology of foxes inhabiting the nesting grounds of geese on the...
Gengping Zhu; Qiang Liu; Yubao Gao
Ecological niche modeling (ENM) seeks to characterize the ecological requirements of species using their occurrence in association with environmental variables. The classic applications of ENM to biological invasions involve the calibration of niche modeling in the native range and the subsequent transfer of the calibrated models to other regions to predict areas of potential invasion. However, low niche model transferability has been reported in certain cases, resulting in artifactual conclu...
The transformation of Llanos del Orinoco, focused on the flooding savanna, is evaluated in terms of the change and replacement of the savanna ecosystem and the plant species distribution under a Landscape Ecological approach. This research is carried out at three spatial scales: sub-continental, regional and local. At sub-continental scale, monthly composites NOAA-AVHRR normalized vegetation index (NDVI) images were interpreted based on the phenology of savanna ecosystems in the Llanos del Or...
Luptáčik, P.; Šustr, Vladimír
Postojna : Inštitut za raziskovanje krasa ZRC SAZU, 2010. s. 121-122. ISBN 978-961-269-286-5. [International Conference on Subterranean Biology /20./. 29.08.2010-03.09.2010, Postojna] Grant ostatní: SAV(SK) VEGA 1/0139/09 Institutional research plan: CEZ:AV0Z60660521 Keywords : Pantelozetes cavaticus * distribution * food preference Subject RIV: EH - Ecology, Behaviour
O. V. Zhukov
The species and taxonomy diversity are the impotant components of ecological diversity of living organism’s complexes. The article analyses the modern approaches of quantitative estimation of the ecosystem diversity. In hypothetical experiment the indexes have been tested to study the properties dealing with taxonomy complexity reflection. Diversity indexes have been used to analyze some real soil invertebrate’s complexes.
Full Text Available Abstract The paper examines the taxonomic status of North African Crocidura russula Auctorum. On the basis of morphological data, the taxon needs to be divided into at least two species: C. russula (Hermann, 1780 from western Europe, coastal Morocco and middle-western Algeria, up to about the Algiers area, and possibly even Sardinia and Ibiza, and another species, distributed in coastal middle-eastern Algeria, Tunisia, Pantelleria and, possibly, La Galite archipelago. The first and only available name for the above, eastern taxon is Crocidura cossyrensis Contoli, 1989.
Khyanjeet Gogoi¹, Raju Das² and Rajendra Yonzone³
Full Text Available Among the Orchid flora of Assam, four species of terrestrial Orchid Tainia recorded viz., T. angustifolia, T. latifolia, T. minor and T. wrayana in an intensive field survey during 1996-2010. The present paper deals Tainia species diversity and distribution in Assam of North East India. This attempt is the first step to correct taxonomic identification to workout currently accepted botanical names with present ecological status, date of collection, habitat, altitudinal ranges, phenology and local and general distribution of Tainia species in the regions.
Pierson, Elizabeth D.; Fellers, Gary M.
This study had two primary objectives: to conduct roost surveys C. townsendii in two parts of California where distributional information was most limited or lacking, and to obtain information on roosting and foraging ecology in two distinctly different habitats. This project was urgently needed because 1) recent California Department of Fish and Game surveys (conducted in 1987-1991) documented significant population declines in most surveyed areas, 2) distribution was still unknown in areas with suitable roosting habitat, and 30 the impact of various land management practices (e.g. prescribed fire, timber, harvest, agriculture, and grazing) on foraging behavior was unknown. A total of 95 abandoned mines, 18 caves, 11 man-made water tunnels, and 7 buildings were surveys for bats. Twenty-pne structures (twelve caves and nine mines) showed significant use by C. townsendii. Eleven are located in the western Sierra Nevada foothills, and ten in the Trinity Mountain area, Six maternity colonies, ranging in size from 48 to about 250 adult females, were identifies. Three were in caves, and three were in mines. Distribution for this species is somewhat patchy, and appears to be limited by the availability of roosting habitat. Historic and recent records would suggest that populations are concentrated in areas with abundant caves (especially the large lava flows in the northeastern portion of the state and karstic regions in the Sierra Nevada and Trinity Alps) or extensive abandoned mine working (particularly in the desert regions to the east and southeast of the Sierra Nevada). Radiotracking studies were conducted in two different habitats: 1) coastal forest (California bay, Douglas fir, and redwood) and grazed grassland at Pt. Reyes National Seashore, and 2) a mixture of scrub (with juniper and mountain mahogany) and ponderosa pine forest at Lava Beds National Monument. At Point Reyes they study colony resided in an abandoned ranch house, and at Lava Beds in a lava tube
Trenkel, V. M.; Huse, G.; MacKenzie, B. R.; Alvarez, P.; Arrizabalaga, H.; Castonguay, M.; Goñi, N.; Grégoire, F.; Hátún, H.; Jansen, T.; Jacobsen, J. A.; Lehodey, P.; Lutcavage, M.; Mariani, P.; Melvin, G. D.; Neilson, J. D.; Nøttestad, L.; Óskarsson, G. J.; Payne, M. R.; Richardson, D. E.; Senina, I.; Speirs, D. C.
This paper reviews the current knowledge on the ecology of widely distributed pelagic fish stocks in the North Atlantic basin with emphasis on their role in the food web and the factors determining their relationship with the environment. We consider herring (Clupea harengus), mackerel (Scomber scombrus), capelin (Mallotus villosus), blue whiting (Micromesistius poutassou), and horse mackerel (Trachurus trachurus), which have distributions extending beyond the continental shelf and predominantly occur on both sides of the North Atlantic. We also include albacore (Thunnus alalunga), bluefin tuna (Thunnus thynnus), swordfish (Xiphias gladius), and blue marlin (Makaira nigricans), which, by contrast, show large-scale migrations at the basin scale. We focus on the links between life history processes and the environment, horizontal and vertical distribution, spatial structure and trophic role. Many of these species carry out extensive migrations from spawning grounds to nursery and feeding areas. Large oceanographic features such as the North Atlantic subpolar gyre play an important role in determining spatial distributions and driving variations in stock size. Given the large biomasses of especially the smaller species considered here, these stocks can exert significant top-down pressures on the food web and are important in supporting higher trophic levels. The review reveals commonalities and differences between the ecology of widely distributed pelagic fish in the NE and NW Atlantic basins, identifies knowledge gaps and modelling needs that the EURO-BASIN project attempts to address.
In the application of the "Original" Bloom's taxonomy since its publication in 1956, several weaknesses and practical limitations have been revealed. Besides, psychological and educational research has witnessed the introduction of several theories and approaches to learning which make students more knowledgeable of and responsible for their own…
Full Text Available A comprehensive privacy framework is essential for the progress of the information privacy field. Some practical implications of a comprehensive framework are laying foundation for building information privacy metrics and having fruitful discussions. Taxonomy is an essential step in building a framework. This research study attempts to build taxonomy for the information privacy domain based on empirical data. The classical grounded theory approach introduced by Glaser was applied and incidents reported by the International Association of Privacy Professionals (IAPP are used for building the taxonomy. These incidents include privacy related current research works, data breaches, personal views, interviews, and technological innovations. TAMZAnalyzer, an open source qualitative data analysis tool, was used in coding, keeping memos, sorting, and creating categories. The taxonomy is presented in seven themes and several categories including legal, technical, and ethical aspects. The findings of this study helps practitioners understand and discuss the subjects and academia work toward building a comprehensive framework and metrics for the information privacy domain
When a star is described as a spectral class G2V, we know that the star is similar to our Sun.We know its approximate mass, temperature, age and size. In our work with extrasolar planets database, it is very useful to have a taxonomy scale (classification), for example, like the Harvard classification for stars. This new taxonomy has to be comprehensible and present the important information about extrasolar planets. The important information of extrasolar planets are their mass, radius, period, density, eccentricity, temperature, and their distance from the parent star. There are too many parameters, that is, taxonomy with six parameters would be complicated and difficult to apply. We propose following the extrasolar planet taxonomy scale with only four parameters. The first parameter is the information about the mass of an extrasolar planet in the form of the units of the mass of other known planets, where M - Mercury, E - Earth, N - Neptune, and J - Jupiter. The second parameter is the distance from its pa...
Full Text Available The age in which we are living nowadays is characterized by rapid innovation in the development of information and communication technologies (ICT. This innovation has a significant influence on the education process. This article deals with computer animation in technical education. Our aim is to show the taxonomy of education animation. The paper includes practical examples of animation.
Full Text Available Modelling the spatial distributions of human parasite species is crucial to understanding the environmental determinants of infection as well as for guiding the planning of control programmes. Here, we use ecological niche modelling to map the current potential distribution of the macroparasitic disease, lymphatic filariasis (LF, in Africa, and to estimate how future changes in climate and population could affect its spread and burden across the continent. We used 508 community-specific infection presence data collated from the published literature in conjunction with five predictive environmental/climatic and demographic variables, and a maximum entropy niche modelling method to construct the first ecological niche maps describing potential distribution and burden of LF in Africa. We also ran the best-fit model against climate projections made by the HADCM3 and CCCMA models for 2050 under A2a and B2a scenarios to simulate the likely distribution of LF under future climate and population changes. We predict a broad geographic distribution of LF in Africa extending from the west to the east across the middle region of the continent, with high probabilities of occurrence in the Western Africa compared to large areas of medium probability interspersed with smaller areas of high probability in Central and Eastern Africa and in Madagascar. We uncovered complex relationships between predictor ecological niche variables and the probability of LF occurrence. We show for the first time that predicted climate change and population growth will expand both the range and risk of LF infection (and ultimately disease in an endemic region. We estimate that populations at risk to LF may range from 543 and 804 million currently, and that this could rise to between 1.65 to 1.86 billion in the future depending on the climate scenario used and thresholds applied to signify infection presence.
Paola B. Reyna
Full Text Available Invasive species are one of the most significant causes of biodiversity loss and changes in ecosystem services, which underlines the importance of their detection and their study. The Asian clams (Corbiculidae are invasive organisms that accidentally entered the La Plata River, Argentina, presumably in the 1960s. The objectives of the present study were to identify the corbiculid species and to determine their distribution at several locations along the Suquía River basin, an extended area in central Argentina. In addition, population structure was evaluated monthly during one year, at a site in the city of Córdoba that is characterized by high human influence. The presence of Corbicula fluminea (Müller, 1774 and Corbicula largillierti (Philippi, 1844 in the Suquía River basin is reported for the first time. The former species was found only in a lentic environment (San Roque reservoir, while the latter was also found along the tributary rivers and brooks of the basin. Corbicula largillierti showed variations in average density between the different sites and also in biomass and size classes throughout the study period at the site at Córdoba city. The relative composition of the sediments, flow fluctuation and human pollution may be responsible for the observed differences.
Office of Water Program Operations (EPA), Cincinnati, OH. National Training and Operational Technology Center.
Presented is material on planning, administering, collecting, evaluating, interpreting, and reporting biological data related to water quality studies in both fresh and marine waters. Topics include aquatic ecology, water pollution, taxonomy, bacteriology, bioassays, water quality enhancement, and administration of water quality standards. Each of…
Dietrich, Muriel; Gómez-Díaz, Elena; McCoy, Karen D
The ubiquity of ticks and their importance in the transmission of pathogens involved in human and livestock diseases are reflected by the growing number of studies focusing on tick ecology and the epidemiology of tick-borne pathogens. Likewise, the involvement of wild birds in dispersing pathogens and their role as reservoir hosts are now well established. However, studies on tick-bird systems have mainly focused on land birds, and the role of seabirds in the ecology and epidemiology of tick-borne pathogens is rarely considered. Seabirds typically have large population sizes, wide geographic distributions, and high mobility, which make them significant potential players in the maintenance and dispersal of disease agents at large spatial scales. They are parasitized by at least 29 tick species found across all biogeographical regions of the world. We know that these seabird-tick systems can harbor a large diversity of pathogens, although detailed studies of this diversity remain scarce. In this article, we review current knowledge on the diversity and global distribution of ticks and tick-borne pathogens associated with seabirds. We discuss the relationship between seabirds, ticks, and their pathogens and examine the interesting characteristics of these relationships from ecological and epidemiological points of view. We also highlight some future research directions required to better understand the evolution of these systems and to assess the potential role of seabirds in the epidemiology of tick-borne pathogens. PMID:20874222
Enumerating organisms collected via nets and sediment grabs is a mainstay of aquatic ecology. Since morphological taxonomy can require considerable resources and expertise, DNA barcode-based identification of mixed-organism samples offers a valuable tool in support of biological...
Tyne, Julian A.; Loneragan, Neil R.; Kopps, Anna M.; Allen, Simon J.; Kruetzen, Michael; Bejder, Lars
In Shark Bay, Western Australia, bottlenose dolphins Tursiops sp. carry conical sponges Echinodictyum mesenterinum on their rostra in the only documented cetacean foraging behaviour using a tool ('sponging'). In this study, we examined the influence of various ecological factors on live sponge distr
Full Text Available As evidence of global changes is accumulating, scientists are challenged to detect distribution changes of vectors, reservoirs and pathogens caused by anthropogenic and/or environmental changes. Statistical and mathematical distribution models are emerging for ixodid hard ticks whereas no prediction has ever been developed for argasid ones. These last organisms remain unknown and under-reported; they differ from hard ticks by many structural, biological and ecological properties, which complicate direct adaptation of hard tick models. However, investigations on bibliographic resources concerning these ticks suggest that distribution modelling based on natural niche concept and using environmental factors especially climate is also possible, bearing in mind the scale of prediction and their specificities including their nidicolous lifestyle, an indiscriminate host feeding and a short bloodmeal duration, as well as a flexible development cycle through diapause periods.
Full Text Available Photographic identification of individual organisms can be possible from natural body markings. Data from photo-ID can be used to estimate important ecological and conservation metrics such as population sizes, home ranges or territories. However, poor quality photographs or less well-studied individuals can result in a non-unique ID, potentially confounding several similar looking individuals. Here we present a Bayesian approach that uses known data about previous sightings of individuals at specific sites as priors to help assess the problems of obtaining a non-unique ID. Using a simulation of individuals with different confidence of correct ID we evaluate the accuracy of Bayesian modified (posterior probabilities. However, in most cases, the accuracy of identification decreases. Although this technique is unsuccessful, it does demonstrate the importance of computer simulations in testing such hypotheses in ecology.
Abdallah M. Samy
Full Text Available Introduction: In past decades, leishmaniasis burden has been low across Egypt; however, changing environment and land use has placed several parts of the country at risk. As a consequence, leishmaniasis has become a particularly difficult health problem, both for local inhabitants and for multinational military personnel. Methods: To evaluate coarse-resolution aspects of the ecology of leishmaniasis transmission, collection records for sandflies and Leishmania species were obtained from diverse sources. To characterize environmental variation across the country, we used multitemporal Land Surface Temperature (LST and Normalized Difference Vegetation Index (NDVI data from the Moderate Resolution Imaging Spectroradiometer (MODIS for 2005-2011. Ecological niche models were generated using MaxEnt, and results were analyzed using background similarity tests to assess whether associations among vectors and parasites (i.e., niche similarity can be detected across broad geographic regions. Results: We found niche similarity only between one vector species and its corresponding parasite species (i.e., Phlebotomus papatasi with Leishmania major, suggesting that geographic ranges of zoonotic cutaneous leishmaniasis and its potential vector may overlap, but under distinct environmental associations. Other associations (e.g., P. sergenti with L. major were not supported. Mapping suitable areas for each species suggested that northeastern Egypt is particularly at risk because both parasites have potential to circulate. Conclusions: Ecological niche modeling approaches can be used as a first-pass assessment of vector-parasite interactions, offering useful insights into constraints on the geography of transmission patterns of leishmaniasis.
The forest ground flora plays a vital role in cycling of nutrients, habitat preservation and rejuvenation of shrubs. The vegetation consociated with the forest plays a vital role in the protection, function of the forest ecosystem. Effective management of forest vegetation serves the forest ecosystem in assaying the balance of harmful effects of vying vegetation. Relationship of ecology between environment and vegetation and their ordination techniques and classification methods has become vital means in the research field vegetation ecology. Classification depends on the abundances of ground vegetation species. Multivariate technique is an important technique in ecology and biology for the group prediction. Classification of different plant communities had been accomplished by carrying out TWINSPAN analysis using PC-ORD. The results were shown in a two-way cluster dendrogram. A dendrogram is a hierarchical representation of species in graphical form. The encompassing survey has been conducted in the Changa Manga Forest (CMF) which resulted in the identification of the 45 species belonging to 24 families from all over the forest area. The TWINSPAN results of CMF ascertained the following dominant species in all of the four zones, Cynadon dactylon, Malvestrum cormendalianum, Oxalis corniculata, Parthenium hysterophorus, Desmostachya bipinnata. (author)
Distribution of some elements (Hg, Zn, Sb, Co and Sc) in dental tissues (enamel, dentine, pulp) has been investiaated by instrumental neutron activation analysis (INAA). Teeth samples were taken from patients living in different regions (mine and mineralized areas, plain), taking into account the following parameters: ecological conditions, age of patients, stomatological operations and use of local cosmetic preparations containig mercury. Samples of vegetation (beech, moss, pine) from two locations belonging to regions of mineralized areas also were analyzed. Results of our investigations are presented and discussed. (author)
The constraints of bioenergetics on the ecology and distribution of vertebrate ectotherms were quantified. During this project we conducted studies: to determine the role of incubation temperature on the post-hatching growth rate of the snapping turtle, Chelydra serpentina; to establish the rate of energy expenditure of the slider turtle, Trachemys scripta, in the field; to determine the field metabolic rates, body temperatures and selected microclimates of the box turtle, Terrapene carolina, and to measure the effect of diet type on the consumption rate, digestion rate and digestive efficiency of adult T. scripta. We also completed our research on the three-dimensional bioenergetic climate space for freshwater turtles.
Di Serio, F; Flores, R; Verhoeven, J Th J; Li, S-F; Pallás, V; Randles, J W; Sano, T; Vidalakis, G; Owens, R A
Viroids are the smallest autonomous infectious nucleic acids known so far. With a small circular RNA genome of about 250-400 nt, which apparently does not code for any protein, viroids replicate and move systemically in host plants. Since the discovery of the first viroid almost forty-five years ago, many different viroids have been isolated, characterized and, frequently, identified as the causal agents of plant diseases. The first viroid classification scheme was proposed in the early 1990s and adopted by the International Committee on Taxonomy of Viruses (ICTV) a few years later. Here, the current viroid taxonomy scheme and the criteria for viroid species demarcation are discussed, highlighting the main taxonomic questions currently under consideration by the ICTV Viroid Study Group. The impact of correct taxonomic annotation of viroid sequence variants is also addressed, taking into consideration the increasing application of next-generation sequencing and bioinformatics for known and previously unrecognized viroids. PMID:25216773
In error analysis or error management, the focus is usually upon individuals who have made errors. In large complex systems, however, most people work in teams or groups. Considering this working environment, insufficient emphasis has been given to 'team errors'. This paper discusses the definition of team errors and its taxonomy. These notions are also applied to events that have occurred in the nuclear power industry, aviation industry and shipping industry. The paper also discusses the relations between team errors and Performance Shaping Factors (PSFs). As a result, the proposed definition and taxonomy are found to be useful in categorizing team errors. The analysis also reveals that deficiencies in communication, resource/task management, excessive authority gradient, excessive professional courtesy will cause team errors. Handling human errors as team errors provides an opportunity to reduce human errors
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Pinnularia (Bacillariophyta do curso inferior do rio Negro, Amazonas, Brasil: taxonomia e distribuição temporal Pinnularia (Bacillariophyta from the lower course of Negro river (Amazon, Brazil: taxonomy and temporal distribution
Andreia Cavalcante Pereira
Full Text Available Este estudo relata a taxonomia e distribuição temporal do gênero Pinnularia ocorrente no curso inferior do rio Negro (03º02'46,5"S e 60º15'13,1"W ao longo de um ciclo anual. O trabalho foi conduzido a partir da análise de amostras coletadas na coluna d'água, em escala mensal, entre os meses de outubro de 2002 a setembro de 2003. As espécies foram descritas e comentadas com base na sua morfologia e morfometria. Onze espécies e quatro variedades foram identificadas, ilustradas e incluídas em chave taxonômica. Dois táxons registrados neste estudo, P. sterrenburgii var. sterrenburgii Metzeltin & Lange-Bertalot e P. subgibba var. capitata Metzeltin & Krammer, constituem primeira citação de ocorrência para o rio Negro. Temporalmente, a maior riqueza de espécies ocorreu entre os meses de outubro a dezembro de 2002, período de águas baixas, quando houve provavelmente maior interação entre água e sedimento possibilitando aporte de indivíduos da região bentônica. Considerando a ocorrência dos táxons ao longo do estudo, somente P. confirma foi considerada frequente, estando presente em mais de 50% das amostras analisadas.This study reports the taxonomy and temporal distribution of the Pinnularia genus occurring in the lower course Negro river (03º02'46,5"S e 60º15'13,1"W along an annual cycle. Samples were collected in the water column monthly, from October 2002 to September 2003. The species were described and commented based on their morphology and morphometry. Eleven species and four varieties are registered, illustrated and incorporated in a taxonomic key. P. sterrenburgii var. sterrenburgii Metzeltin & Lange-Bertalot and P. subgibba var. capitata Metzeltin & Krammer are the first references to Negro river. Temporally, the highest species richness occurred from October and December 2002, low water period, when happened more interaction between water and sediment, and the contribution of the benthos individuals. On base in
Heraldo A. Britski
Full Text Available A new species of the genus Leporinus is described from the rio Araguaia, in Mato Grosso and Goiás states, Brazil. The new species has the dental formula 4/3, a unique feature within the genus; all other species of Leporinus have dental formulae 3/3, 3/4 or 4/4. In addition, the new species can also be distinguished by the following combination of characters: 36 to 37 scales in the lateral line, 4/4.5 or 4/5 series of scales in the transversal line, 16 circumpeduncular scale series, anal fin surpassing base of lower caudal-fin rays and three blotches along the lateral line. The new species shares with L. parae and L. lacustris a rather deep body, terminal mouth, long anal fin, three small dark blotches on the lateral line, the latter two, particularly the last one, usually fading, and preference for lentic habitats. Comments on the taxonomy and distribution of the species L. parae and L. lacustris are provided.Uma nova espécie do gênero Leporinus é descrita do rio Araguaia, nos estados do Mato Grosso e Goiás, Brasil. A característica mais notável da nova espécie é sua fórmula dental 4/3, única entre as espécies do gênero que possuem fórmula dental 3/3, 3/4 ou 4/4. A nova espécie também pode ser reconhecida pela combinação das seguintes características: 36 a 37 escamas na linha lateral, 4/4,5 ou 4/5 séries de escamas na linha transversal, 16 series de escamas circumpedunculares, nadadeira anal ultrapassando a base dos raios inferiores da nadadeira caudal e presença de três manchas escuras ao longo da linha lateral. A nova espécie compartilha com L. parae e L. lacustris corpo alto, boca terminal, nadadeira anal longa e escura, três manchas escuras na linha lateral pequenas, sendo as duas últimas, em especial a última, geralmente apagadas, e preferência por habitats lênticos. Além disso, são feitos comentários sobre a taxonomia e a distribuição de L. parae e L. lacustris.
Jayasree, V.; Parulekar, A.H.
New distribution records for 27 species of Alcyonaceans are given. These include major genera Sinularia (12 spp.), Lobophytum (7 spp.), Sarcophyton (6 spp.), Dampia (1 sp.) and Nephthya (1 sp.). The factors that influence the distribution of corals...
MALATRAS APOSTOLOS; Freyssinet, Eric; BESLAY Laurent
The proliferation of mobile devices with increased capabilities and the widespread penetration of wireless networks have spurred a convergence of mobile and commodity computing systems. In this respect, botnets have also found their way to the mobile ecosystem, where they exploit characteristics of phones (e.g. linked to user accounts, repositories of private and sensitive information) to have a profound impact on operations and user privacy. We report here on an in-depth taxonomy of mobile b...
A mass-based definition for planets is proposed with dynamical circumstances and compositional characteristics used to define types of planets. Dynamical planet classes include Principal planets, Belt planets, Moons, and Rogue planets. Compositional classes include rock, ice, and gas planets with refined classes when sufficient data is available. The dynamical and compositional definitions are combined with a six class planetary mass scale into a taxonomy that can be used to classify both Sol...
Blanchard, Ph.; Petroni, F.; Serva, M.; Volchenkov, D.
Abstract A Markov chain analysis of a network generated by the matrix of lexical distances allows for representing complex relationships between different languages in a language family geometrically, in terms of distances and angles. The fully automated method for construction of language taxonomy is tested on a sample of fifty languages of the IndoEuropean language group and applied to a sample of fifty languages of the Austronesian language group. The Anatolian and Kurgan hypoth...
When a star is described as a spectral class G2V, we know that the star is similar to our Sun. We know its approximate mass, temperature, age, and size. When working with an extrasolar planet database, it is very useful to have a taxonomy scale (classification) such as, for example, the Harvard classification for stars. The taxonomy has to be easily interpreted and present the most relevant information about extrasolar planets. I propose an extrasolar planet taxonomy scale with four parameters. The first parameter concerns the mass of an extrasolar planet in the form of units of the mass of other known planets, where M represents the mass of Mercury, E that of Earth, N Neptune, and J Jupiter. The second parameter is the planet's distance from its parent star (semimajor axis) described in a logarithm with base 10. The third parameter is the mean Dyson temperature of the extrasolar planet, for which I established four main temperature classes: F represents the Freezing class, W the Water class, G the Gaseous class, and R the Roasters class. I devised one additional class, however: P, the Pulsar class, which concerns extrasolar planets orbiting pulsar stars. The fourth parameter is eccentricity. If the attributes of the surface of the extrasolar planet are known, we are able to establish this additional parameter where t represents a terrestrial planet, g a gaseous planet, and i an ice planet. According to this taxonomy scale, for example, Earth is 1E0W0t, Neptune is 1N1.5F0i, and extrasolar planet 55 Cnc e is 9E-1.8R1. PMID:22506608
The proliferation of ontologies and taxonomies in many domains increasingly demands the integration of multiple such ontologies. The goal of ontology integration is to merge two or more given ontologies in order to provide a unified view on the input ontologies while maintaining all information coming from them. We propose a new taxonomy merging algorithm that, given as input two taxonomies and an equivalence matching between them, can generate an integrated taxonomy in a fully automatic manner. The approach is target-driven, i.e. we merge a source taxonomy into the target taxonomy and preserve the structure of the target ontology as much as possible. We also discuss how to extend the merge algorithm providing auxiliary information, like additional relationships between source and target concepts, in order to semantically improve the final result. The algorithm was implemented in a working prototype and evaluated using synthetic and real-world scenarios.
Full Text Available Our work proposes the use of topic taxonomies as part of a filtering language. Given a taxonomy, a classifier is trained for each one of its topics. The user is able to formulate logical rules combining the available topics, e.g. (Topic1 AND Topic2 OR Topic3, in order to filter related documents in a stream. Using the trained classifiers, every document in the stream is assigned a belief value of belonging to the topics of the filter. These belief values are then aggregated using logical operators to yield the belief to the filter. In our study, Support Vector Machines and Naïve Bayes classifiers were used to provide topic probabilities. Aggregation of topic probabilities based on fuzzy logic operators was found to improve filtering performance on the Renters text corpus, as compared to the use of their Boolean counterparts. Finally, we deployed a filtering system on the web using a sample taxonomy of the Open Directory Project.
TITIEN NGATINEM PRAPTOSUWIRYO
Full Text Available Praptosuwiryo TNg, Pribadi DO, Puspitaningtyas DM, Hartini S (2011 Inventorying the tree fern Genus Cibotium of Sumatra: Ecology, population size and distribution in North Sumatra. Biodiversitas 12: 204-211. Cibotium is one tree fern belongs to the family Cibotiaceae which is easily differentiated from the other genus by the long slender golden yellowish-brown smooth hairs covered its rhizome and basal stipe with marginal sori at the ends of veins protected by two indusia forming a small cup round the receptacle of the sorus. It has been recognized as material for both traditional and modern medicines in China, Europe, Japan and Southeast Asia. Population of Cibotium species in several countries have decreased rapidly because of over exploitation and there is no artificial cultivation until now. The aims of this study were: (i To re-inventory the species of Cibotiun in North Sumatra, (ii to record the ecology and distribution of each species, and (iii to assess the population size of each species. Field study was carried out by using random search with belt transect. Two species were recorded, namely C. arachnoideum dan C. barometz. The geographical distribution of the two species in North Sumatra are presented. Cibotium is commonly growing terrestrially on opened or rather opened areas in secondary forets and primary forest at hills or lower mountains with a relatively high humidity at 30-90º slopes. C. arachnoideum has a strict distribution and only found at 1740-1770 m a.s.l. in primary forest, whereas C. barometz has a broad distribution in secondary forest at elevation range from 650-1200 m.
Full Text Available Evaluating the interactions of woody plants has been a major research topic of ecological investigations in arid ecosystems. Plant-plant interactions can shift from positive (facilitation to negative (competition depending on levels of environmental stress and determine the spatial pattern of plants. The spatial distribution analysis of plants via different summary statistics can reveal the interactions of plants and how they influence one another. An aggregated distribution indicates facilitative interactions among plants, while dispersion of species reflects their competition for scarce resources. This study was aimed to explore the intraspecific interactions of eshnan (Seidlitzia rosmarinus shrubs in arid lands, central Iran, using different summary statistics (i.e., pair correlation function g(r, O-ring function O(r, nearest neighbour distribution function D(r, spherical contact distribution function Hs(r. The observed pattern of shrubs showed significant spatial heterogeneity as compared to inhomogeneous Poisson process (α=0.05. The results of g(r and O(r revealed the significant aggregation of eshnan shrubs up to scale of 3 m (α=0.05. The results of D(r and Hs(r also showed that maximum distance to nearest shrub was 6 m and the distribution of the sizes of gaps was significantly different from random distribution up to this spatial scale. In general, it was concluded that there were positive interactions between eshnan shrubs at small scales and they were aggregated due to their intraspecific facilitation effects in the study area.
Erfanifard, Y.; Khosravi, E.
Evaluating the interactions of woody plants has been a major research topic of ecological investigations in arid ecosystems. Plant-plant interactions can shift from positive (facilitation) to negative (competition) depending on levels of environmental stress and determine the spatial pattern of plants. The spatial distribution analysis of plants via different summary statistics can reveal the interactions of plants and how they influence one another. An aggregated distribution indicates facilitative interactions among plants, while dispersion of species reflects their competition for scarce resources. This study was aimed to explore the intraspecific interactions of eshnan (Seidlitzia rosmarinus) shrubs in arid lands, central Iran, using different summary statistics (i.e., pair correlation function g(r), O-ring function O(r), nearest neighbour distribution function D(r), spherical contact distribution function Hs(r)). The observed pattern of shrubs showed significant spatial heterogeneity as compared to inhomogeneous Poisson process (α=0.05). The results of g(r) and O(r) revealed the significant aggregation of eshnan shrubs up to scale of 3 m (α=0.05). The results of D(r) and Hs(r) also showed that maximum distance to nearest shrub was 6 m and the distribution of the sizes of gaps was significantly different from random distribution up to this spatial scale. In general, it was concluded that there were positive interactions between eshnan shrubs at small scales and they were aggregated due to their intraspecific facilitation effects in the study area.
Li, Ying-jie; Zhang, Lie-yu; Wu, Yi-wen; Li, Cao-le; Yang, Tian-xue; Tang, Jun
To understand pollution of heavy metals in surface sediments of shallow lakes, surface sediments samples of 11 lakes in Jiangsu province were collected to determine the content of six heavy metals including As, Cr, Cu, Pb, Zn and Ni. GIS was used to analyze the spatial distribution of heavy metals, and geological accumulation index (Igeo), modified contamination index (mCd) pollution load index (PLI) and potential ecological risk index (RI) were used to evaluate heavy metal contamination in the sediments. The results showed that: in the lakes' surface sediments, the average content of As, Cu, Zn, Cr, Pb, Ni in multiples of soil background of Jiangsu province were 1.74-3.85, 0.65-2.66, 0.48-3.56, 0.43-1.52, 0.02-1.49 and 0.12-1.42. According to the evaluation results of Igeo and RI, As, which had high degree of enrichment and great potential ecological risk, was the main pollutant, followed by Cu, and pollution of the rest of heavy metals was relatively light. Combining the results of several evaluation methods, in surface sediments of Sanjiu Lake, Gaoyou Lake and Shaobo Lake, these heavy metals had the most serious pollution, the maximum pollution loading and moderate potential ecological risk; in surface sediments of Gehu Lake, Baima Lake and Hongze Lake, some regions were polluted by certain metals, the overall trend of pollution was aggravating, the pollution loading was large, and the potential ecological risk reached moderate; in the other 5 lakes, the risk of sediments polluted by heavy metals, as well as the pollution loading, was small, and the overall was not polluted. PMID:27548952
Valdez Barillas, José R.; Quinn, Colin F.; Freeman, John L.; Lindblom, Stormy D.; Fakra, Sirine C.; Marcus, Matthew A.; Gilligan, Todd M.; Alford, Élan R.; Wangeline, Ami L.; Pilon-Smits, Elizabeth A.H.
The goal of this study was to investigate how plant selenium (Se) hyperaccumulation may affect ecological interactions and whether associated partners may affect Se hyperaccumulation. The Se hyperaccumulator Astragalus bisulcatus was collected in its natural seleniferous habitat, and x-ray fluorescence mapping and x-ray absorption near-edge structure spectroscopy were used to characterize Se distribution and speciation in all organs as well as in encountered microbial symbionts and herbivores. Se was present at high levels (704–4,661 mg kg−1 dry weight) in all organs, mainly as organic C-Se-C compounds (i.e. Se bonded to two carbon atoms, e.g. methylselenocysteine). In nodule, root, and stem, up to 34% of Se was found as elemental Se, which was potentially due to microbial activity. In addition to a nitrogen-fixing symbiont, the plants harbored an endophytic fungus that produced elemental Se. Furthermore, two Se-resistant herbivorous moths were discovered on A. bisulcatus, one of which was parasitized by a wasp. Adult moths, larvae, and wasps all accumulated predominantly C-Se-C compounds. In conclusion, hyperaccumulators live in association with a variety of Se-resistant ecological partners. Among these partners, microbial endosymbionts may affect Se speciation in hyperaccumulators. Hyperaccumulators have been shown earlier to negatively affect Se-sensitive ecological partners while apparently offering a niche for Se-resistant partners. Through their positive and negative effects on different ecological partners, hyperaccumulators may influence species composition and Se cycling in seleniferous ecosystems. PMID:22645068
The terms and classification schemes used in the computer security field today are not standardised. Thus the field is hard to take in, there is a risk of misunderstandings, and there is a risk that the scientific work is being hampered. Therefore this report presents a proposal for a taxonomy of software based IT weapons. After an account of the theories governing the formation of a taxonomy, and a presentation of the requisites, seven taxonomies from different parts of the computer securit...
Gafiychuk, V V; Ulanowicz, R E; Ulanowicz, Robert E.
We consider an ecological system governed by Lotka-Volterra dynamics and an example of an economic system as a mesomarket with perfect competition. We propose a mechanism for cooperative self-regulation that enables the system under consideration to respond properly to changes in the environment. This mechanism is based on (1) active individual behavior of the system elements at each hierarchical level and (2) self-processing of information caused by the hierarchical organization. It is shown how the proposed mechanism suppresses nonlocal interaction of elements belonging to a particular level as mediated by higher levels.
Yu, Jia; Buyya, Rajkumar
With the advent of Grid and application technologies, scientists and engineers are building more and more complex applications to manage and process large data sets, and execute scientific experiments on distributed resources. Such application scenarios require means for composing and executing complex workflows. Therefore, many efforts have been made towards the development of workflow management systems for Grid computing. In this paper, we propose a taxonomy that characterizes and classifi...
George J. Chirima
Full Text Available Documenting current species distribution patterns and their association with habitat types is important as a basis for assessing future range shifts in response to climate change or other influences. We used the adaptive local convex hull (a-LoCoH method to map distribution ranges of 12 ungulate species within the Kruger National Park (KNP based on locations recorded during aerial surveys (1980–1993. We used log-linear models to identify changes in regional distribution patterns and chi-square tests to determine shifts in habitat occupation over this period. We compared observed patterns with earlier, more subjectively derived distribution maps for these species. Zebra, wildebeest and giraffe distributions shifted towards the far northern section of the KNP, whilst buffalo and kudu showed proportional declines in the north. Sable antelope distribution contracted most in the north, whilst tsessebe, eland and roan antelope distributions showed no shifts. Warthog and waterbuck contracted in the central and northern regions, respectively. The distribution of impala did not change. Compared with earlier distributions, impala, zebra, buffalo, warthog and waterbuck had become less strongly concentrated along rivers. Wildebeest, zebra, sable antelope and tsessebe had become less prevalent in localities west of the central region. Concerning habitat occupation, the majority of grazers showed a concentration on basaltic substrates, whilst sable antelope favoured mopane-dominated woodland and sour bushveld on granite. Buffalo showed no strong preference for any habitats and waterbuck were concentrated along rivers. Although widespread, impala were absent from sections of mopane shrubveld and sandveld. Kudu and giraffe were widespread through most habitats, but with a lesser prevalence in northern mopane-dominated habitats. Documented distribution shifts appeared to be related to the completion of the western boundary fence and widened provision of
Pierrat, B.; Saucede, T.; Laffont, R.; De Ridder, C.; Festeau, A.; David, B.
Understanding the factors that determine the distribution of taxa at various spatial scales is a crucial challenge in the context of global climate change. This holds particularly true for polar marine biota that are composed of both highly adapted and vulnerable faunas. We analysed the distribution of 2 Antarctic echinoid species, Sterechinus antarcticus and S. neumayeri, at the scale of the entire Southern Ocean using 2 niche modelling procedures. The performance of distribution models was ...
Full Text Available The current distribution of the moss Streptocolea atrata (Hornsch. Ochyra & Żarnowiec (Bryopsida, Grimmiaceae in the Czech Republic is reviewed. This species is known to occur only in the Giant Mountains and Bohemian Forest in this country. The history of its discovery is presented and all the available specimens are listed and their distribution is indicated in a map. The global distribution of S. atrata is briefly commented.
Han, Taeman; Kim, Jin Ill; Yi, Dae-Am; Jeong, Jongchel; An, Seung Lak; Park, In Gyun; Park, Haechul
The ball-rolling dung beetles of the genus Scarabaeus are very ecologically important for the recycling of feces of large herbivores and the related nature management. There has been a significant decline, however, in the numbers of many species at the population and individual levels. S. typhon is currently thought to be the sole member of Scarabaeus distributed in Korea; however, that species underwent serious local extinctions in the 1970s. Before planning a full-scale species recovery, it is important to have an understanding of the exact species diversity and genetic structures of the focal species. We therefore attempted an integrative taxonomy focused on the Korean population of S. typhon and also on S. pius and S. sacer, which were once thought to be distributed in Korea, using both morphological and molecular approaches. The results of both approaches reveal the Korean species of Scarabaeus to be S. typhon and S. pius. In particular, our molecular results inferred from cytochrome c oxidase subunit I genetic analysis show that S. typhon should be considered a single species despite having various haplotypes throughout its wide geographical range from Europe to Korea. We identified two distinct lineages of S. pius (groups A and B) across a wide distributional range. We conclude that the Korean specimens of S. pius belong to group A and that S. pius is new to Korea under the current taxonomic treatment. PMID:27470822
Maughan, Heather; Van der Auwera, Geraldine
Bacillus is a diverse bacterial genus characterized by cells growing aerobically and forming dormant endospores. Although Bacillus species were some of the first bacteria ever characterized, their relationships to one another remain enigmatic. The recent deluge of environmental sequencing projects has further complicated our view of Bacillus taxonomy and diversity. In this review we discuss the current state of Bacillus taxonomy and focus on two examples that highlight the ecological diversity found within identical 16S rDNA-based clusters: the identification of ecologically distinct clusters of B. simplex in Evolution Canyons and the demarcation of species in the industrially and medically important B. cereus group. These examples highlight the difficulties of purely 16S rDNA-based taxonomy, emphasizing the need to interpret the massive amounts of molecular data from environmental sequencing projects in a bacterial ecology framework. Such interpretations are likely to reveal ecological diversity within Bacillus that extends beyond that previously imaginable, providing a true picture of Bacillus ecology and evolution. PMID:21334463
Moreno-Ruiz, José Luis; Tapia-Garcia, Margarito; Licea, Sergio; Figueroa-Torres, María Guadalupe; Esquivel, Alfonso; Herrera-Galindo, Jorge Eduardo; González-Fernández, José Manuel; González-Macias, Maria Del Carmen
A taxonomic study of diatoms was carried out in a tropical coastal lagoon. Material for this study consists of water samples obtained from February-March 1992 to November-December 2000. Qualitative and quantitative analyses showed the presence of 373 taxa of which the families Bacillariaceae (67 species) and Chaetocerotaceae (37 species) were the most abundant groups. The species Skeletonema costatum, Chaetoceros curvisetus, Coscinodiscus radiatus var. radiatus, Ditylum brightwellii, Thalassiosira eccentrica and Entomoneis alata were found associated with moderate water quality and forming blooms. In addition, a regional comparison between Mexico and South America of the identified species is given. For practical handling, indicative values obtained from their ecological composition are incorporated as well as a code of the floristic list. Achecklist of the species and their occurrence are given. PMID:22315822
Rosa In\\u00E9s Gonz\\u00E1lez Torres
Full Text Available Frijol silvestre en el Valle Central de Costa Rica: distribución ecológica y caracterización molecular. Este trabajo presenta una actualización sobre la distribución de las formas silvestres de fríjol común en Costa Rica, su ecología y su caracterización molecular. Ala fecha 22 poblaciones fueron encontradas en cuatro cuencas alrededor del Valle Central, generalmente en vegetaciones ruderales (frecuentemente bordes de cafetales, con estatuto de conservación variable (desde protegido a amenazado. Su caracterización molecular indica su pertenencia al acervo genético mesoamericano. Varios marcadores indican una variabilidad aumentada en las formas silvestres y permiten inferir la presencia de un fenómeno de flujo genético e introgresión desde materiales cultivados.
Flint, P.L.; Mallek, E.J.; King, R.J.; Schmutz, J.A.; Bollinger, K.S.; Derksen, D.V.
Goose populations molting in the Teshekpuk Lake Special Area of the National Petroleum Reserve-Alaska have changed in size and distribution over the past 30 years. Black brant (Branta bernicla nigricans) are relatively stable in numbers but are shifting from large, inland lakes to salt marshes. Concurrently, populations of greater white-fronted geese (Anser albifrons frontalis) have increased seven fold. Populations of Canada geese (Branta canadensis and/or B. hutchinsii) are stable with little indication of distributional shifts. The lesser snow goose (Anser caerulescens caerulescens) population is proportionally small, but increasing rapidly. Coastline erosion of the Beaufort Sea has altered tundra habitats by allowing saltwater intrusion, which has resulted in shifts in composition of forage plant species. We propose two alternative hypotheses for the observed shift in black brant distribution. Ecological change may have altered optimal foraging habitats for molting birds, or alternatively, interspecific competition between black brant and greater white-fronted geese may be excluding black brant from preferred habitats. Regardless of the causative mechanism, the observed shifts in species distributions are an important consideration for future resource planning. ?? 2007 Springer-Verlag.
There have been many controversies on the number of valid, species under Oxycephalus including the studies made from Indian waters. This is the first comprehensive account on the distribution of this genus covering the entire Indian Ocean through...
Eiserhardt, Wolf L.; Svenning, J.-C.; Kissling, W. Daniel;
palm species distributions, community composition and species richness such as the abiotic environment (climate, soil chemistry, hydrology and topography), the biotic environment (vegetation structure and species interactions) and dispersal. The importance of contemporary vs. historical impacts of...
US Fish and Wildlife Service, Department of the Interior — When dealing with the factors that impact the distribution of organisms on the landscape, it is important to describe the scale of effects that influence their...
Mens, Tom; CZARNECKI, Krzysztof; Van Gorp, Pieter
This report summarises the results of the discussions of a working group on model transformation of the Dagstuhl Seminar on Language Engineering for Model-Driven Software Development. The main contribution is a taxonomy of model transformation. This taxonomy can be used to help developers in deciding which model transformation approach is best suited to deal with a particular problem.
H. Lo; Hickman, M.; Walstad, M.
In this paper, the authors formulate an evaluation taxonomy to identify a broad range of factors that would be important for a comprehensive assessment of congestion pricing. The evaluation taxonomy consists of three dimensions: road pricing strategies, impacted groups and impacts. The paper also includes a literature review of previous research in road pricing, especially regarding modeling tools and methods for conducting evaluation.
Rodgers, Michelle S.; Hillaker, Barbara D.; Haas, Bruce E.; Peters, Cheryl
Evaluation of public service programming is becoming increasingly important with current funding realities. The taxonomy of evaluation competencies compiled by Ghere et al. (2006) provided the starting place for Taxonomy for Assessing Evaluation Competencies in Extension. The Michigan State University Extension case study described here presents a…
Weimer, Jeroen; Pape, Joost C.
This paper argues that debate on corporate governance in an international context is hampered by the lack of a coherent framework. A taxonomy of systems of corporate governance is proposed as a remedy. The taxonomy is based upon eight characteristics: the prevailing concept of the firm, the board sy
Mouzas, Stefanos; Furmston, Michael
We propose a classification of contracts based on their real-life usage. Recognizing that there are a number of different and overlapping ways of classifying contracts, we can identify at least seven ways of doing this: 1) by the subject matter, 2) by the way the contract is made, 3) by the function of contracts, 4) by the time-horizon, 5) by the ability to re-negotiate terms, 6) by the involvement of consumers, 7) by the existence of mutual trust. The proposed taxonomy draws our attention to...
The study is conducted to investigate the spatial distribution, sources and ecological risk of seven heavy metals in surface sediments of Nansi Lake, Eastern China. A total of 29 samples were collected in surface sediments of Nansi Lake, and were analyzed for three nutrients (TN, TOC and TP), two major metals (Al and Fe), as well as seven trace metals (As, Cd, Cr, Cu, Hg, Pb and Zn). The mean concentrations of As, Cd, Cr, Cu, Hg, Pb, Zn, Fe and Al were 14.41, 0.22, 71.10, 30.1, 0.048, 29.14, 90.2, 30,816 and 70,653 mg kg-1, respectively, and the mean contents of these metals were higher than the background values with the exception of Cu and Fe. The spatial distribution indicated that the contents of all seven heavy metals were characterized by relatively higher contents in the upper lake than the lower lake. The hotspots with high values of As, Cd and Hg were associated with the river mouths, and the hotspots of Pb were mainly located around the dam in the central part, while no significant associations were displayed between spatial distribution of Cr, Cu, Zn and the river mouths. The mean enrichment factor (EF) values of As, Cd, Hg and Pb were 2.03, 2.93, 3.21 and 2.18, respectively, showing their moderate enrichment, while Cr, Cu and Zn with mean EF values of 1.19, 0.89 and 1.01 were deficiency to minimal enrichment. Multivariate and geostatistical analyses suggested that PC1 controlled by Cr, Cu and Zn was a lithogenic component, and come from parent rocks leaching. PC2 including Cd and partially Hg represented the factor from industrial wastewater discharge. PC3 showed elevated loadings of As and partially Cd, and could be attributed to the agricultural practices. While PC4 including Pb and partially Hg, was dominated by coal combustion. The results of potential ecological risk suggested that sediment environment of Nansi Lake suffered from high ecological risk. (author)
In the present study, the ecological distribution of marine Actinobacteria isolated from seamount and non-seamount stations in the Tyrrhenian Sea was investigated. A collection of 110 isolates was analyzed by Automated Ribosomal Intergenic Spacer Analysis (ARISA) and 16S rRNA gene sequencing of representatives for each ARISA haplotype (n = 49). Phylogenetic analysis of 16S rRNA sequences showed a wide diversity of marine isolates and clustered the strains into 11 different genera, Janibacter, Rhodococcus, Arthrobacter, Kocuria, Dietzia, Curtobacterium, Micrococcus, Citricoccus, Brevibacterium, Brachybacterium and Nocardioides. Interestingly, Janibacter limosus was the most encountered species particularly in seamounts stations, suggesting that it represents an endemic species of this particular ecosystem. The application of BOX-PCR fingerprinting on J. limosus sub-collection (n = 22), allowed their separation into seven distinct BOX-genotypes suggesting a high intraspecific microdiversity among the collection. Furthermore, by screening the biotechnological potential of selected actinobacterial strains, J. limosus was shown to exhibit the most important biosurfactant activity. Our overall data indicates that Janibacter is a major and active component of seamounts in the Tyrrhenian Sea adapted to low nutrient ecological niche.
Teng, Yanguo; Feng, Dan; Wu, Jin; Zuo, Rui; Song, Liuting; Wang, Jinsheng
In this study, we examined three horizontal and vertical soil profiles along a sewage drainage ditch in order to determine the spatial distribution of Cu, Pb, and Zn in soils and to assess the bioavailability and potential ecological risks associated with these metals in a potential groundwater source area. Results showed that the concentrations of Cu, Pb, and Zn were approximately at background level, suggesting that human activities (industrial and agricultural pollution) had a negligible influence on these metals in soil, and that the concentrations reflected the natural background levels in the study area. Cu, Pb, and Zn concentrations were slightly higher in topsoil (0-20 cm) than deeper in the soil profile. Using a modified BCR sequential extraction method to evaluate the mobility and bioavailability of metals showed that the potential bioavailability sequence of Cu, Pb, and Zn at three depths in the soil profile was in the order Cu ≈ Pb < Zn. The potential ecological risk from the metals was evaluated using risk assessment code, and the results suggest that Cu and Zn pose no or low risk, while there is a low or medium risk from Pb. Results from groundwater monitoring showed that the groundwater was not polluted by leaching from soil. PMID:25910722
Ettoumi, Besma; Chouchane, Habib; Guesmi, Amel; Mahjoubi, Mouna; Brusetti, Lorenzo; Neifar, Mohamed; Borin, Sara; Daffonchio, Daniele; Cherif, Ameur
In the present study, the ecological distribution of marine Actinobacteria isolated from seamount and non-seamount stations in the Tyrrhenian Sea was investigated. A collection of 110 isolates was analyzed by Automated Ribosomal Intergenic Spacer Analysis (ARISA) and 16S rRNA gene sequencing of representatives for each ARISA haplotype (n=49). Phylogenetic analysis of 16S rRNA sequences showed a wide diversity of marine isolates and clustered the strains into 11 different genera, Janibacter, Rhodococcus, Arthrobacter, Kocuria, Dietzia, Curtobacterium, Micrococcus, Citricoccus, Brevibacterium, Brachybacterium and Nocardioides. Interestingly, Janibacter limosus was the most encountered species particularly in seamounts stations, suggesting that it represents an endemic species of this particular ecosystem. The application of BOX-PCR fingerprinting on J. limosus sub-collection (n=22), allowed their separation into seven distinct BOX-genotypes suggesting a high intraspecific microdiversity among the collection. Furthermore, by screening the biotechnological potential of selected actinobacterial strains, J. limosus was shown to exhibit the most important biosurfactant activity. Our overall data indicates that Janibacter is a major and active component of seamounts in the Tyrrhenian Sea adapted to low nutrient ecological niche. PMID:27242145
Navarro Fernández, Eloísa; Pozo de la Tijera, Carmen; Escobedo Cabrera, Enrique
We carried out surveys realized field work from March to September 2000 to get the current distribution of Cebids in the state of Campeche, Mexico. Based on interviews and direct observations. We defined the distribution of Ateles geoffroyi yucatanensis and Alouatta pigra and we documented the first time localities where Allouata palliata is found in the state. We made distributional maps of each species using vegetation overlays from Inventario Nacional Forestal (Inv For) and each point documented during fieldwork. We presented the distribution of species according to confiability of the verified or expected data. Using the attributes table of Inv For, we calculated the areas of distribution which were 22,735 km2 for Alouatta sp. and 18,501 km2 for A. g. yucatanensis. We also presented the area occupied by each species according to vegetation types and the relative proportion of these vegetation types in the state. We confirmed the ability of Alouatta sp. to survive in disturbed environments produced by habitat fragmentation, and the affinity of A. g. yucatanesis to well preserved habitats. PMID:15162751
Falda, Marco; Lavezzo, Enrico; Fontana, Paolo; Bianco, Luca; Berselli, Michele; Formentin, Elide; Toppo, Stefano
The advances of omics technologies have triggered the production of an enormous volume of data coming from thousands of species. Meanwhile, joint international efforts like the Gene Ontology (GO) consortium have worked to provide functional information for a vast amount of proteins. With these data available, we have developed FunTaxIS, a tool that is the first attempt to infer functional taxonomy (i.e. how functions are distributed over taxa) combining functional and taxonomic information. FunTaxIS is able to define a taxon specific functional space by exploiting annotation frequencies in order to establish if a function can or cannot be used to annotate a certain species. The tool generates constraints between GO terms and taxa and then propagates these relations over the taxonomic tree and the GO graph. Since these constraints nearly cover the whole taxonomy, it is possible to obtain the mapping of a function over the taxonomy. FunTaxIS can be used to make functional comparative analyses among taxa, to detect improper associations between taxa and functions, and to discover how functional knowledge is either distributed or missing. A benchmark test set based on six different model species has been devised to get useful insights on the generated taxonomic rules. PMID:27534507
Newsted, John L; Nakanishi, Junko; Cousins, Ian; Werner, Kurt; Giesy, John P
An assessment of HFE-7500, a 'segregated' hydrofluoroether, was conducted to evaluate the potential for exposure to and subsequent effects on humans and wildlife in Japan. The segregated hydrofluoroethers belong to a class of fluorochemicals currently being proposed as replacements for traditional fluorochemicals (CFCs and PFCs) that are currently being used in several industries, in particular, the semiconductor industry. These traditional compounds have been implicated as ozone-depleting or potent "greenhouse gases". The segregated hydrofluoroethers have useful physical and chemical properties, but do not contribute to ozone depletion and have lower "global warming potential" (GWP) indices. Although the physical properties of these materials (low H2O solubility and high vapor pressure) suggest there would be a very low level of risk to aquatic systems, a thorough analysis had not been previously performed. Predicted environmental concentrations (PECs) of HFE-7500 in Japan were determined with the Higashino model, a Gausian puff and plume model that used an approximation of environmental releases to the atmosphere as input to the model. Allowable concentrations to protect aquatic life, wildlife, and humans from noncancer effects were determined as detailed in USEPA's final Water Quality Guidance for the Great Lakes Systems. Potential risk to ecological receptors and humans was determined by calculating hazard quotients and margins of safety. The results of the risk assessment indicate that HFE-7500 poses no significant risk to either aquatic or terrestrial wildlife species or humans living in the Japanese environment. The least margin of safety for any ecological receptor was 100,000, and a margin of safety greater than 100,000,000 for most receptors indicated that HFE-7500 poses no threat to human health. Because of a scarcity of toxicity and exposure data, the risk assessment was based on very conservative assumptions. Therefore, the actual margins of safety for
East, Samuel; Butts, Jonathan; Papa, Mauricio; Shenoi, Sujeet
Distributed Network Protocol (DNP3) is the predominant SCADA protocol in the energy sector - more than 75% of North American electric utilities currently use DNP3 for industrial control applications. This paper presents a taxonomy of attacks on the protocol. The attacks are classified based on targets (control center, outstation devices and network/communication paths) and threat categories (interception, interruption, modification and fabrication). To facilitate risk analysis and mitigation strategies, the attacks are associated with the specific DNP3 protocol layers they exploit. Also, the operational impact of the attacks is categorized in terms of three key SCADA objectives: process confi- dentiality, process awareness and process control. The attack taxonomy clarifies the nature and scope of the threats to DNP3 systems, and can provide insights into the relative costs and benefits of implementing mitigation strategies.
Brzev, S.; Scawthorn, C.; Charleson, A.W.; Allen, L.; Greene, M.; Jaiswal, Kishor; Silva, V.
This report documents the development and applications of the Building Taxonomy for the Global Earthquake Model (GEM). The purpose of the GEM Building Taxonomy is to describe and classify buildings in a uniform manner as a key step towards assessing their seismic risk, Criteria for development of the GEM Building Taxonomy were that the Taxonomy be relevant to seismic performance of different construction types; be comprehensive yet simple; be collapsible; adhere to principles that are familiar to the range of users; and ultimately be extensible to non-buildings and other hazards. The taxonomy was developed in conjunction with other GEM researchers and builds on the knowledge base from other taxonomies, including the EERI and IAEE World Housing Encyclopedia, PAGER-STR, and HAZUS. The taxonomy is organized as a series of expandable tables, which contain information pertaining to various building attributes. Each attribute describes a specific characteristic of an individual building or a class of buildings that could potentially affect their seismic performance. The following 13 attributes have been included in the GEM Building Taxonomy Version 2.0 (v2.0): 1.) direction, 2.)material of the lateral load-resisting system, 3.) lateral load-resisting system, 4.) height, 5.) date of construction of retrofit, 6.) occupancy, 7.) building position within a block, 8.) shape of the building plan, 9.) structural irregularity, 10.) exterior walls, 11.) roof, 12.) floor, 13.) foundation system. The report illustrates the pratical use of the GEM Building Taxonomy by discussing example case studies, in which the building-specific characteristics are mapped directly using GEM taxonomic attributes and the corresponding taxonomic string is constructed for that building, with "/" slash marks separating attributes. For example, for the building shown to the right, the GEM Taxonomy string is: DX1/MUR+CLBRS+MOCL2/LWAL3/
Vallade, M.; Houchmandzadeh, B.
Explicit formulas for the steady-state distribution of species in two interconnected communities of arbitrary sizes are derived in the framework of Hubbell’s neutral model of biodiversity. Migrations of seeds from both communities as well as mutations in both of them are taken into account. These results generalize those previously obtained for the “island-continent” model and they allow an analysis of the influence of the ratio of the sizes of the two communities on the dominance/diversity equilibrium. Exact expressions for species abundance distributions are deduced from a master equation for the joint probability distribution of species in the two communities. Moreover, an approximate self-consistent solution is derived. It corresponds to a generalization of previous results and it proves to be accurate over a broad range of parameters. The dynamical correlations between the abundances of a species in both communities are also discussed.
Bathyal and abyssal foraminifera in the Gulf of Mexico are distributed among thirteen generic predominance facies. Five predominance facies nearly encircle the Gulf basin along the slope and rise; a sixth predominance facies blankets the Sigsbee Plain, and a seventh is restricted to the Mississippi Fan. The remaining eight predominance facies have more restricted distributions. The areal patterns of these predominance facies can be related chiefly to water mass and substrate characteristics; modifications are brought about by calcite dissolution, upwelling, and sill depth. Analysis of ancient generic predominance facies is useful in predicting relative paleobathymetry and other paleoenvironmental properties. ?? 1984.
Tuskan, Gerald A [ORNL; Yin, Tongming [ORNL
Lack of aspen (Populus tremuloides) recruitment and canopy replacement of aspen stands that grow on the edges of grasslands on the low-elevation elk (Cervus elaphus) winter range of Rocky Mountain National Park (RMNP) in Colorado has been a cause of concern for more than 70 years (Packard, 1942; Olmsted, 1979; Stevens, 1980; Hess, 1993; R.J. Monello, T.L. Johnson, and R.G. Wright, Rocky Mountain National Park, 2006, written commun.). These aspen stands are a significant resource since they are located close to the park's road system and thus are highly visible to park visitors. Aspen communities are integral to the ecological structure of montane and subalpine landscapes because they contain high native species richness of plants, birds, and butterflies (Chong and others, 2001; Simonson and others, 2001; Chong and Stohlgren, 2007). These low-elevation, winter range stands also represent a unique component of the park's plant community diversity since most (more than 95 percent) of the park's aspen stands grow in coniferous forest, often on sheltered slopes and at higher elevations, while these winter range stands are situated on the low-elevation ecotone between the winter range grasslands and some of the park's drier coniferous forests.
Shayma Abdulwahab; Adel M. Rabee
Biodiversity of zooplankton in the Tigris River running in Baghdad City, central Iraq, was investigated. Fourteen physical and chemical parameters, were analyzed, these parameters include water and air temperature, pH, EC, turbidity, TDS, DO, BOD5, total hardness, Ca+2, Mg+2, chloride, nitrate and reactive phosphate. Most of these values were within of the Iraqi and international standard limits. In all, 106 taxonomy units of zooplankton were identified, including 65 taxa belonging to rotifer...
Safe amendment rates (the predicted no-effect concentration or PNEC) of seven organic wastes were estimated from the species sensitivity distribution of a battery of soil biota tests and compared with different realistic amendment scenarios (different predicted environmental concentrations or PEC). None of the wastes was expected to exert noxious effects on soil biota if applied according either to the usual maximum amendment rates in Europe or phosphorus demands of crops (below 2 tonnes DM ha-1). However, some of the wastes might be problematic if applied according to nitrogen demands of crops (above 2 tonnes DM ha-1). Ammonium content and organic matter stability of the studied wastes are the most influential determinants of the maximum amendment rates derived in this study, but not pollutant burden. This finding indicates the need to stabilize wastes prior to their reuse in soils in order to avoid short-term impacts on soil communities. - Ecological risk assessment of organic waste amendments
Kadyrov, Abdysalom Kh; Karpiński, Lech; Szczepański, Wojciech T; Taszakowski, Artur; Walczak, Marcin
New data on distribution, biology, and ecology of some little-known cerambycid species, collected in the western part of Tajikistan, are presented. Arhopalus rusticus (Linnaeus, 1758) is recorded in Tajikistan for the first time. New localities of species considered pests or invasive species such as Aeolesthes sarta (Solsky, 1871) and Xylotrechus stebbingi Gahan, 1906 are also given. The list of the taxa collected by the first author during many years of field research in Tajikistan as well as photographs of poorly known species from his collection, including some endemics, are additionally provided. Furthermore, high quality photographs of some extremely rare species that were collected during our expedition, i.e., Turkaromia gromenkoi Danilevsky, 2000 and Ropalopus nadari Pic, 1894, with images of their habitats or feeding grounds are also presented for the first time. PMID:27551221
GAO Yang; LUO Zhuanxi; XIA Jun
Engineering nano-materials ＆ their impact on human health or environmental security constitute a newly emerging R＆D hot spot and a key problem now urgently waiting for its solution in supporting the sustainability of China＇s nano-science and related technology development. At present, water bodies in Chinese cities have been seriously polluted by metallic nano-particles （MNPs） while related monitoring data are found woefully lacking throughout the country. Based on the above understanding, this article gives a round-up explanation on distributive characteristics of MNPs in the river mouths or water bodies of Chinese cities, their ecological hazards as well as our research in this regard, providing some inspiring ideas and data for control over this scourge. In addition, our exploration probes the discharge traits of MNPs themselves and the mechanism underlying its impact on water pollution.
The constraints of bioenergetics on the ecology and distribution of vertebrate ectotherms were quantified. During 1988, we conducted studies: (1) to determine the role of incubation temperature on the post-hatching growth rate of the snapping turtle, Chelydra serpentina, (2) to establish the rate of energy expenditure of the slider turtle, Trachemys scripta, in the field, (3) to determine the field metabolic rates, body temperatures and selected microclimates of the box turtle, Terrapene carolina, and (4) to measure the effect of diet type on the consumption rate, digestion rate and digestive efficiency of adult T. scripta. We also continued our research on the three-dimensional bioenergetic climate space for freshwater turtles. In addition, we completed editing the symposium volume from our symposium on Constraints of Bioenergetics on Animal Population Dynamics that was held at the last meeting of the American Society of Zoologists. 43 refs., 1 fig., 1 tab.
We quantified the constraints of bioenergetics on the ecology and distribution of vertebrate ectotherms. During the first eight months of 1988 we conducted studies to determine the role of incubation temperature on the post hatching growth rate of the snapping turtle, Chelydra serpentina, to establish the rate of energy expenditure of the slider turtle, Trachemys scripta, in the field, to determine the field metabolic rates, body temperatures, and water flux rates of the box turtle, Terrapene carolina, and to measure the effect of diet type on the consumption rate, digestion rate and digestive efficiency of adult T. scripta. We also organized and chaired a national symposium on Constraints of Bioenergetics on Animal Population Dynamics at the 1987 meeting of the American Society of Zoologists. 18 refs.
Kim, Noori; Yoon, Yong-Jin; Allen, Jont B
This article reviews the development of metamaterials (MM), starting from Newton's discovery of the wave equation, and ends with a discussion of the need for a technical taxonomy (classification) of these materials, along with a better defined definition of metamaterials. It is intended to be a technical definition of metamaterials, based on a historical perspective. The evolution of MMs began with the discovery of the wave equation, traceable back to Newton's calculation of the speed of sound. The theory of sound evolved to include quasi-statics (Helmholtz) and the circuit equations of Kirchhoff's circuit laws, leading to the ultimate development of Maxwell's equations and the equation for the speed of light. Be it light, or sound, the speed of the wave-front travel defines the wavelength, and thus the quasi-static (QS) approximation. But there is much more at stake than QSs. Taxonomy requires a proper statement of the laws of physics, which includes at least the six basic network postulates: (P1) causality (non-causal/acausal), (P2) linearity (non-linear), (P3) real (complex) time response, (P4) passive (active), (P5) time-invariant (time varying), and (P6) reciprocal (non-reciprocal). These six postulates are extended to include MMs. PMID:27369168
Yu, Cheng; Chen, Shuang; Zhang, Lu
As the second deepest lake in Africa, Lake Tanganyika plays an important role in supplying fish protein for citizens in the catchment. However, the lake is increasingly threatened by environmental pollution with the development of social economy and expanding of population. In order to reveal the external source of heavy metals in Lake Tanganyika, 16 surface sediment samples from the rivers which flow into the northeast of the lake were collected and analyzed. Besides the contents, the potential ecological risk indices (RI) of each heavy metal were also analyzed. Furthermore, the relationship, between land use and the spatial distribution of heavy metals was also discussed. The average contents of Cu, Zn, Cd, Pb and Hg were 18. 4, 21.2, 0.05, 6.6 mg x kg(-1) and 8.4 ng x g(-1), respectively, with the maximum values of Zn, Pb and Cd located in Bujumbura urban rivers. The data indicated that all the inflow rivers were at low potential ecological risk. RI of heavy metals ranked as the following order: Cd > Hg > Cu > Pb > Zn, as Cd being the key element contributing to the risk. The relationship between land use and heavy metals showed that the contents of heavy metals were highest in urban areas, followed by estuarine wetlands, and woodlands were least polluted by heavy metals. This distribution type implied that human activities could cause the heavy metal accumulation in the surface sediments of nearby rivers. The urban areas and estuarine wetlands need to be concerned in the further study. PMID:27363136
El-Taher, A; García-Tenorio, R; Khater, Ashraf E M
Phosphate (P) industries will be one of the main industrial sectors in Saudi Arabia within the next few years. Al-Jalamid phosphate mine, which started operation a few years ago, is one of the biggest mining locations in the Middle East region. It is planned to mine 12 million tons run of mine ore per year (Mty) and produce about 4.5 Mty of phosphate concentrate for the next 20 years. Long term ecological impacts of phosphate mining activities on soil and groundwater should be investigated. The contaminated soil acts as a long term source of environmental contamination. The main aim of this work was to shed more light on the elemental characterization and spatial distributions in soil areas located in the vicinity of the phosphate mining activities. A total of sixty eight surface and subsurface soil samples from 34 locations around Al-Jalamid phosphate mine have been collected. The elemental characterization of soil samples was achieved using instrumental neutron activation analysis (INAA). Pollution indices, geoaccumulation (I(geo)) and pollution load (PLI) indices were calculated from some elements to evaluate the soil pollution. Until now, there is no existing pre-operational elemental characterization in soil to evaluate the foreseen ecological impacts of phosphate mining. Our results are the first to evaluate the present situation that will be the base for the future evaluations. The main aim of this work was to shed more light on the elemental characterization and spatial distributions in soil and their relation to phosphate mining activities, and to better understand the behavior of different elements in soil in an arid environment. PMID:26629683
The biogeography of marine benthic macroinvertebrates of the U.S. Atlantic coast from Delaware Bay north to Passamaquoddy Bay, Maine, was studied to define physical-chemical factors affecting broad taxa distributions and provide information needed to calibrate benthic indices of ...
Yersinia pestis (Plague bacterium) from great gerbil was isolated in 2005 in Xinjiang Dzungarian Basin, which confirmed the presence of the plague epidemic foci. This study analysed the spatial distribution and suitable habitat of great gerbil based on the monitoring data of great gerbil from Chinese Center for Disease Control and Prevention, as well as the ecological environment elements obtained from remote sensing products. The results showed that: (1) 88.5% (277/313) of great gerbil distributed in the area of elevation between 200 and 600 meters. (2) All the positive points located in the area with a slope of 0–3 degree, and the sunny tendency on aspect was not obvious. (3) All 313 positive points of great gerbil distributed in the area with an average annual temperature from 5 to 11 °C, and 165 points with an average annual temperature from 7 to 9 °C. (4) 72.8% (228/313) of great gerbil survived in the area with an annual precipitation of 120–200mm. (5) The positive points of great gerbil increased correspondingly with the increasing of NDVI value, but there is no positive point when NDVI is higher than 0.521, indicating the suitability of vegetation for great gerbil. This study explored a broad and important application for the monitoring and prevention of plague using remote sensing and geographic information system
Aranda da Silva, A.; Gooday, A. J.
The genus Gromia includes large marine protists ('gromiids') with filose pseudopodia and sack-like organic tests. The first deep-water species were discovered in the 1990s on the Oman Margin of the Arabian Sea and subsequently found on the Pakistan Margin. We present a survey of gromiids in samples collected off Oman in 2002 and off Pakistan in 2003. In addition to the two species ( Gromia sphaerica and Gromia pyriformis) already described from this area, at least eight undescribed gromiid species were present. Sausage shaped, grape shaped and spherical morphotypes were represented among this material. On the Oman Margin, gromiids occurred in densities up to several thousand individuals m -2 at 1400 and 1700 m but were much less common at 1100 and 2000 m. Apart from G. pyriformis, which was fairly common (several hundred individuals m -2) at 1000 m, gromiids were uncommon in core samples taken off Pakistan, with 11 indiv. m -2 at 1200 m and 19 indiv. m -2 at 1850 m. On both margins, these protists occurred at depths >1000 m where bottom-water oxygen concentrations exceeded ˜0.2 ml l -1 (=8.92 μM l -1) land sediments were fully bioturbated and oxidised. However, they were not observed at similar oxygen levels above the OMZ. Most gromiids lived on the sediment surface with their apertures facing down and their pseudopodia presumably deployed into the sediment to feed on surficial material and associated bacteria. We conclude that these large protists may play an important ecological role in the bathyal Arabian Sea, particularly in carbon cycling but also in structuring the surficial sediments. In addition, their tests, particularly those of G. sphaerica, provide substrates for attached Foraminifera.
Benito, Blas M.; Svenning, Jens-Christian; Kellberg-Nielsen, Trine;
(MIS 5e) available to date. This was used to calibrate a palaeo-species distribution model, and analyse variable importance at continental and local scales. Location: Europe and Irano-Turanian region (20° N to 70° N, 10° W to 70° E). Methods: We used archaeological records and palaeoclimatic...... and topographic predictors to calibrate a model based on an ensemble of generalized linear models fitted with different combinations of predictors and weighted background data. Area under the curve scores computed by leave-one-out were used to assess variable importance at the continental scale, while local....... The highest habitat suitability scores were observed along the Mediterranean coastlines. Mountain ranges and continental plains showed low habitat suitability values. Main conclusions: The model results confirmed that abiotic drivers played an important role in shaping Neanderthals distribution during...
Kumar, S.; Kulloli, R. N.; J. C. Tewari; Singh, J P; Singh, A.
Ceropegia bulbosa Roxb. is a narrow endemic, tuberous twiner of Asclepiadaceae family. It is medicinally important: tubers are nutritive and edible, leaves are digestive and a cure for dysentery and diarrhea. Exploitation for its tubers and poor regeneration of this species has shrunk its distribution. In order to know its present status, we report here the results of its appraisal in Rajasthan, using remote sensing and ground truthing in the past five years (2009–14). A base m...
La Porta, Barbara
Since research on soft-seabed macrozoobenthic community, including polychaetes, of Mediterranean and in particular Italian Saes still display a lack of data concerning taxonomic aspects and species distribution patterns, and the pre-existing information are frequently outdated, further studies and revisions of data are a primary necessity. These habitats are widely common in coastal areas all over the world and host most of sensitive and protected benthic habitats, species and typical biocoen...
Hagvar, S.; Vanin, Stefano; Ostbye, E.
Updated information is given on the distribution of Chionea araneoides Dalman, 1816 and C. crassipes Boheman, 1846 in Norway. While C. araneoides is very common in southern Norway, there are only two records in northern Norway. C. crassipes has been taken numerously and in several localities in Finnmark, but in southern Norway, only a few individuals have been found in three alpine sites. These may represent relict populations. C. lutescens Lundström, 1907 is reported new to Sweden. Three sam...
Šingliarová, Barbora; Šuvada, Róbert; Mráz, Patrik
The Pilosella alpicola group comprises four morphologically distinct and geographically vicariant alpine taxa. We performed a thorough herbarium revision and literature survey to infer their distributional pattern(s). Pilosella alpicola s.s. occurs in the Alps in two disjunct areas: the Swiss Valais Alps and the Italian Dolomites. Historical records come also from the Austrian Alps (Gurktaler Alps and Hohe Tauern) and from one site from the Alpes Maritimes (Col de Larche), but the localities ...
Moravcová, Lenka; Pyšek, Petr; Pergl, Jan; Perglová, Irena; Gudžinskas, Z.
Wallingford: CAB International, 2007 - (Pyšek, P.; Cock, M.; Nentwig, W.; Ravn, H.), s. 157-169 ISBN 978-1-84593-206-0 R&D Projects: GA ČR(CZ) GA206/05/0323 Grant ostatní: -(XE) EVK2-CT-2001-00128 Institutional research plan: CEZ:AV0Z60050516 Keywords : Seed Bank * germination * distribution Subject RIV: EF - Botanics
Standley, Claire J
Intestinal schistosomiasis, caused by the trematode parasite Schistosoma mansoni, is a disease of major public health importance in the Lake Victoria region. Accurate information pertaining to the disease's distribution can greatly assist in the maintenance and realignment of existing control strategies. Rapid mapping of disease prevalence is reliant on diagnostic technologies; in the case of intestinal schistosomiasis, traditional stool-based methods are beginning to be complimented with new...
Chong Jong Ryol
Full Text Available The Red Data Book of DPRK says that the otter belongs to the category of vulnerable species (VU and suffers from a serious decrease in its numbers recently, although it was widely distributed in the middle and upper parts of rivers all over the country in the past. Therefore, the protection of the otter and its habitat is one of the important issues for species diversity conservation.
Cisneros-Heredia, D.F.; McDiarmid, Roy W.
Anurans of the family Centrolenidae are a diverse clade of arboreal frogs distributed across tropical America. Knowledge of their taxonomy, systematics, ecology, behavior, morphology, and other evolutionary aspects of their biology is deficient. Relationships among centrolenid species remain largely unresolved, with no satisfactory phylogenetic hypothesis, and none of the current genera has compelling evidence of monophyly. Further, understanding the phylogeny of glassfrogs is constrained by species-level taxonomic problems, including incorrect description of characters, incomplete analyses of intraspecific variation, and lack of appreciation of species diversity. Herein, we define and analyze the 23 characters that are useful, in combination, in diagnosing centrolenid species, and thereby provide a reference for the use of future workers. We propose revised classifications for the parietal and visceral peritoneal pigmentation, liver form and coloration of its associated hepatic peritoneum, nuptial excrescences, and hand ornamentation. We comment on the generic and species-level taxonomy of Centrolenidae, proposing the recognition of a new genus and describing a new species from Ecuador. We treat Hyla ocellifera Boulenger as a synonym of Centrolene prosoblepon (Boettger), Hyalinobatrachium cardiacalyptum McCranie & Wilson as a synonym of Hyalinobatrachium chirripoi (Taylor), and Hyalinobatrachium crybetes McCranie and Wilson as a synonym of Hyalinobatrachium colymbiphyllum (Taylor). We also present an annotated list of the species of glassfrogs from the Republic of Ecuador with some distributional remarks.
Kumar, S.; Kulloli, R. N.; Tewari, J. C.; Singh, J. P.; Singh, A.
Ceropegia bulbosa Roxb. is a narrow endemic, tuberous twiner of Asclepiadaceae family. It is medicinally important: tubers are nutritive and edible, leaves are digestive and a cure for dysentery and diarrhea. Exploitation for its tubers and poor regeneration of this species has shrunk its distribution. In order to know its present status, we report here the results of its appraisal in Rajasthan, using remote sensing and ground truthing in the past five years (2009-14). A base map of C. bulbosa was prepared using Geographical Information System (GIS), open source software Quantum GIS, SAGA. The Landsat Enhanced Thematic Mapper (ETM) +Advanced Spaceborne Thermal Emission and Reflection Radiometer (ASTER), Global Digital Elevation Model (GDEM) Satellite Data were used in this study. ASTER and GDEM Data was clipped with district boundary and provided color range to get elevation information. A digital elevation model of Rajasthan physiography was developed from ASTER GDEM of 30-m resolution. GIS layers of Area of occurrences for C. bulbosa plant and elevation were created. This map along with topographic sheets of 1:50000 were used for field traversing and ground truthing as per GPS location inferred from map. Its geographic distribution was assessed using MaxEnt distribution modelling algorithm that employed 12 presence locality data, 19 bioclimatic variables, and elevation data. Results of this modelling predicted occurrence of C. bulbosa in the districts of Sirohi, Jalore, Barmer, Pali, Ajmer, Jhalawar, Dungarpur, Banswara, Baran, Kota, Bundi and Chittorgarh. Ground validation in these districts revealed its presence only at four places in three districts confirming its rarity. Analysis of dominance at their sites of occurrence revealed their poor populations and sub dominant status (RIV = 20-32) and very low density (2-12 plants per tenth ha).
Tânia Tarabini Castellani; Karla Zanenga Scherer
The temporal variation in density and pattern of spatial distribution of Paepalanthus polyanthus (BONG.) Kunth (Eriocaulaceae) were evaluated at a determinate sand dune. This study was carried out over a period of five years, at three permanent plots of 25m2 in a sand dune slack at Joaquina Beach, Florianópolis, SC, Brazil. There were strong density fluctuations throughout these years. In areas 1, 2 and 3, the densities changed from 10.4, 2.2 and 1.8 plants/m2 in December 1986 to 75.8, 11.4 a...
Lee, Min-Woong; Hur, Hyeon; Chang, Kwang-Choon; Lee, Tae-Soo; Ka, Kang-Hyeon; Jankovsky, L.
Inonotus obliquus is a fungus that causes white heart rot on several broad-leaved species. This fungus forms typical charcoal-black, sterile conks (chaga) or cinder conks on infected stems of the birche (Betula spp). The dark brown pulp of the sterile conk is formed by a pure mycelial mass of fungus. Chaga are a folk remedy in Russia, reflecting the circumboreal distribution of I. obliquus in boreal forest ecosystems on Betula spp. and in meridional mountain forests on beech (Fagus spp.) in R...
Juedes, D.W. (Iowa State Univ. of Science and Technology, Ames, IA (United States). Dept. of Computer Science)
Many of the current automatic differentiation (AD) tools have similar characteristics. Unfortunately, the similarities between these various AD tools often cannot be easily ascertained by reading the corresponding documentation. To clarify this situation, a taxonomy of AD tools is presented. The taxonomy places AD tools into the Elemental, Extensional, Integral, Operational, and Symbolic classes. This taxonomy is used to classify twenty-nine AD tools. Each tool is examined individually with respect to the mode of differentiation used and the degree of derivatives computed. A list detailing the availability of the surveyed AD tools is provided in the Appendix. 54 refs., 3 figs., 1 tab.
Taxonomies are often thought to play a niche role within content-oriented knowledge management projects. They are thought to be 'nice to have' but not essential. In this ground-breaking book, Patrick Lambe shows how they play an integral role in helping organizations coordinate and communicate effectively. Through a series of case studies, he demonstrates the range of ways in which taxonomies can help organizations to leverage and articulate their knowledge. A step-by-step guide in the book to running a taxonomy project is full of practical advice for knowledge managers and business owners ali
Tânia Tarabini Castellani
Full Text Available The temporal variation in density and pattern of spatial distribution of Paepalanthus polyanthus (BONG. Kunth (Eriocaulaceae were evaluated at a determinate sand dune. This study was carried out over a period of five years, at three permanent plots of 25m2 in a sand dune slack at Joaquina Beach, Florianópolis, SC, Brazil. There were strong density fluctuations throughout these years. In areas 1, 2 and 3, the densities changed from 10.4, 2.2 and 1.8 plants/m2 in December 1986 to 75.8, 11.4 and 45.6 plants/m2 in December 1991. Area 3, situated on an elevated site, presented greater variation in density, with no live plants in December 1989 and 102.2 plants/m2 at the recruitment observed in May 1990. Despite these density fluctuations, the pattern of spatial distribution was always aggregated (Id>1, P<0.05. The greatest Id values occurred in periods of low density and not in those of high density, associated with seedling recruitment. Factors such as high seed production with low dispersal, massive germination in moit years and a comparatively high death rate of seedlings at sites more subject to flooding or more distant from the water table proved themselves able to promote this aggregate pattern and increase it during plant development.
Full Text Available Free listing was used to obtain names of marine animals from 234 Peruvian children with families involved in fishing activities. They live in the fishing towns of Vila-vila, Morro Sama and Ilo, located in Southern Peru. Fishes, birds and the category “other marine animal” were used for the classification of marine fauna by children. The group of 6-8 year-olds shows a mean frequency of 19.7 names per child, while the group of 9-11 year-olds shows a mean frequency of 25.7 names per child. Folk species of fish is the most frequently recorded category with a predominance of coastal species and with a mean frequency of 7.56 and 11.51 names per child for the groups of 6-8 year-olds and 9-11 year-olds, respectively. In contrast, bird names are less frequently recorded in the lists. Some bird and mollusc names have lexical under-differentiation at a generic level and apparently have lower cultural significance than fish. Children’s classification in different levels of organization is evidence of a folk biology. The folk taxonomy of marine animals could be influenced by the lesser cognitive development of younger children and the ecological salience of some species. Some species with coastal habitat exhibit a high dominance index of folk names. Cultural transmission of knowledge about birds could be failing due to the recent occupancy of the study sites by migratory people and the sexual division of work in the children’s families.
Nickerson, Robert; Muntermann, Jan; Varshney, Upkar; Isaac, Henri
International audience The complexity of the information systems field often lends itself to classification schemes, or taxonomies, which provide ways to understand the similarities and differences among objects under study. Developing a taxonomy, however, is a complex process that is often done in an ad hoc way. This research-in-progress paper uses the design science paradigm to develop a systematic method for taxonomy development in information systems. The method we propose uses an indi...
Grijalva Mario J
Full Text Available Abstract Background Chagas disease transmission risk is a function of the presence of triatomines in domestic habitats. Rhodnius ecuadoriensis is one of the main vectors implicated in transmission of Trypanosoma cruzi in Ecuador. This triatomine species is present in domestic, peridomestic and sylvatic habitats in the country. To determine the distribution of sylvatic populations of R. ecuadoriensis and the factors related to this distribution, triatomine searches were conducted between 2005 and 2009 in southern Ecuador. Methods Manual triatomine searches were conducted by skilled bug collectors in 23 communities. Sylvatic searched sites were selected by a directed sampling, where microhabitats were selected by the searchers and b random sampling, where sampling points where randomly generated. Domiciliary triatomine searches were conducted using the one man-hour method. Natural trypanosome infection was determined by microscopic examination and PCR. Generalized linear models were used to test the effect of environmental factors on the presence of sylvatic triatomines. Results In total, 1,923 sylvatic individuals were collected representing a sampling effort of 751 man-hours. Collected sylvatic triatomines were associated with mammal and bird nests. The 1,219 sampled nests presented an infestation index of 11.9%, a crowding of 13 bugs per infested nest, and a colonization of 80% of the nests. Triatomine abundance was significantly higher in squirrel (Sciurus stramineus nests located above five meters from ground level and close to the houses. In addition, 8.5% of the 820 examined houses in the same localities were infested with triatomines. There was a significant correlation between R. ecuadoriensis infestation rates found in sylvatic and synanthropic environments within communities (p = 0.012. Parasitological analysis revealed that 64.7% and 15.7% of the sylvatic bugs examined (n = 300 were infected with Trypanosoma cruzi and T. rangeli
The distribution and ecology of Thiobacillus ferrooxidans in gold mine dumps and possible means for its inhibition were investigated. A literature survey of the micro-ecology of mine waste dumps in various parts of the world was undertaken. A linear alkylbenzene sulphonate (LAS), NANSA 80/S, and a cetyl pyridinium chloride, Ceepryn, were tested as possible inhibitors for mine dump application. The LAS was rejected because it is poorly soluble in water and required higher concentrations than SLS for the inhibition of T.ferrooxidans. Ceepryn was an efficient inhibitor, but its efficiency was dramatically impeded in the presence of mine dump sand making it unsuitable for application on dumps. The SLS and LAS were tested against a mixed population of T.ferrooxidans from gold mine dumps and these bacteria were shown to be marginally more resistant to the inhibitors than the pure T.ferrooxidans culture. Sampling from mine dumps on the Witwatersrand suggested that the major T.ferrooxidans populations occurred in the moist sand of the drainage areas at the base of dumps, with few viable iron-oxidising bacteria located on the surfaces or in the centre of dumps. Sites of low moisture in dumps contained few or no viable bacteria. In the laboratory the bacterial viability decreased rapidly with loss of moisture from the sand. Moisture was shown to be important to bacterial activity and should be considered with respect to acid drainage control. Experimental sand columns showed that iron was leached with water from mine dump sand in the absence and presence of bacteria. In this study substrates, moisture, oxygen and carbon dioxide availability, ph, temperature, microorganisms and metal pollutants of uranium waste dumps are also covered
Kabi, Fredrick; Muwanika, Vincent; Masembe, Charles
Indigenous cattle populations exhibit various degrees of agro-ecological fitness and provide desirable opportunities for investments to improve sustainable production for better rural small-scale farmers' incomes globally. However, they could be a source of infection to their attendants and other susceptible livestock if their brucellosis status remains unknown. This study investigated the spatial distribution of Brucella antibodies among indigenous cattle populations in Uganda. Sera from a total of 925 indigenous cattle (410 Ankole Bos taurus indicus, 50 Nganda and 465 East African Shorthorn Zebu (EASZ) - B. indicus) obtained randomly from 209 herds spread throughout Uganda were sequentially analysed for Brucella antibodies using the indirect (I) and competitive (C) enzyme linked Immuno-sorbent assays (ELISA). Recent incidences of abortion within the previous 12 months and routine hygienic practices during parturition were explored for public health risks. Brucella antibodies occurred in approximately 8.64% (80/925) and 28.70% (95% CI: 22.52, 34.89) of the sampled individual cattle and herds, respectively. Findings have shown that Ankole and EASZ cattle had similar seroprevalences. Indigenous cattle from the different study agro-ecological zones (AEZs) exhibited varying seroprevalences ranging from approximately 1.78% (95% CI: 0, 5.29) to 19.67% (95% CI: 8.99, 30.35) in the Lake Victoria Crescent (LVC) and North Eastern Drylands (NED) respectively. Significantly higher odds for Brucella antibodies occurred in the NED (OR: 3.40, 95% CI: 1.34, 8.57, p=0.01) inhabited by EASZ cattle compared to the KP (reference category) AEZ. Recent incidences of abortions within the previous 12 months were significantly (ppractices and mass vaccination. PMID:26100405
Dudhagara, Dushyant R; Rajpara, Rahul K; Bhatt, Jwalant K; Gosai, Haren B; Sachaniya, Bhumi K; Dave, Bharti P
The concentration, distribution and ecological risk of polycyclic aromatic hydrocarbons (PAHs) have been investigated in surface sediments near Bhavnagar coast. The concentration of ∑PAHs ranged from 5.02 to 981.18 μg g(-1) dry weight, indicating heavy pollution compared to other historically polluted study sites. It was found to be introduced via mixed origins such as burning of gas, oil, coal, production of petrochemicals, cement, and rubber tires. Domestic fuel burning and motor vehicles are also culprits for air pollution. Industrial effluents and accidental oil spillage can also be considered. PAHs can be exposed through air, water, soil and food sources including ingestion, inhalation, and dermal content in both occupational and non-occupational levels by single or sometimes multiple exposures routes concomitantly. Furthermore, diagnostic ratios, statistical principal component analysis (PCA) and hierarchical cluster analysis (HCA) models have confirmed that the sources of PAHs were both - petrogenic and pyrogenic. For both the sites, assessment of ecological risk of the elevated levels of these pollutants has been exercised based on toxic equivalency factors (TEFs) and risk quotient (RQ) methods. The composite results indicated accurately that both the sites, bears potentially acute and chronic health hazards such as decreased immune functionality, genotoxicity, malignancy and developmental malfunctions in humans. The sites studied here and the workers have been exposed to hazardous pollutants for a longer period of time. Evidences indicate that mixtures of PAHs are carcinogenic to humans, based on occupational studies on workers, exposed to these pollutants. Hence, the present study and statistical approaches applied herein clearly indicate the historic mix routes of PAHs that resulted in magnified concentrations leading to high ecosystem risk. Thus, the scientific communities are urged to develop strategies to minimize the concentrations of PAHs from
Fritts, T.H.; Hoffman, W.; McGehee, M.A.
Aerial surveys of marine waters up to 222 km from shore in the Gulf of Mexico and nearby Atlantic Ocean suggest that marine turtles are largely distributed in waters less than 100 m in depth. The loggerhead turtle (Caretta caretta) was observed nearly 50 times as often in waters off eastern and western Florida as in the western Gulf of Mexico. Loggerheads were present year round but the frequency of sightings in the winter months was lower than at other seasons. Green turtles (Chelonia rnydas) were infrequently observed but were most conspicuous in waters off eastern Florida. Kemp's ridleys (Lepidochelys kempi) were most frequently sighted off southwestern Florida and rarely observed in the western Gulf of Mexico. Leatherback turtles (Dermochelys coriacea) were more conspicuous on the continental shelf than in adjacent deeper waters. A concentration of leatherback and loggerhead turtles occurred west of the Gulf Stream Current in August 1980, near Brevard County, Florida.
Navarro, Joan; Cardador, Laura; Brown, Ruth; Phillips, Richard A
According to niche theory, mechanisms exist that allow co-existence of organisms that would otherwise compete for the same prey and other resources. How seabirds cope with potential competition during the non-breeding period is poorly documented, particularly for small species. Here we investigate for the first time the potential role of spatial, environmental (habitat) and trophic (isotopic) segregation as niche-partitioning mechanisms during the non-breeding season for four species of highly abundant, zooplanktivorous seabird that breed sympatrically in the Southern Ocean. Spatial segregation was found to be the main partitioning mechanism; even for the two sibling species of diving petrel, which spent the non-breeding period in overlapping areas, there was evidence from distribution and stable isotope ratios for differences in habitat use and diving depth. PMID:26165162
Ke, Lixia; Liu, Birong
Pinus massoniana and Pinus taiwanensis are the most common and important tree species in the Huangshan Mountain district, and ectomycorrhizae plays an important role in their forestation. Our investigations in 1998-2003 showed that under the pine forests of this district, there were 43 species of ectomycorrhizal fungi belonging to 10 families and 17 genera, of which, 43 were under Pinus massoniana forest, and 12 under Pinus taiwanensis forest. Only a few species were found under young Pinus massoniana forest, with the dominant of Pisolithus tinctorius (Pers.) Coken and Rhizopogon spp., but under mature Pinus massoniana forest, there were plentiful species, with the dominant of Russulaceae, Amanitaceae, Boletaceae and Canthurellaceae. The relationships between woody species and ectomycorrhizal fungi, and between fungi distribution and temperature, moisture and soil condition were discussed in this paper, which would benefit to the further studies on the effects of different ectomyrrhizal fungi to Pinus massoniana and Pinus taiwanensis forests. PMID:15943356
Eiserhardt, Wolf L.; Svenning, J.-C.; Kissling, W. Daniel;
Species distributions, assemblage composition, and species richness depend on both current environment and the diversification of lineages in past environments. On broad scales, processes that constrain diversifying lineages to certain regions or environments are particularly important. Through s...... of Amazonian palm communities, which mainly reflects the evolution of habitat preferences....... species pool effects, those processes also affect local community composition and richness. In addition, evolution directly affects local communities directly via niche-based assembly. We studied these effects with palms (Arecaceae) as a model group, using a) a dataset including >340,000 palm individuals...... in 430 transects in the Western Amazon, b) a set of range maps for all American palms (550 spp.), and c) global country-level presence/ absence data of all (>2400) palm species. These data were analysed with novel phylogenetic community structure and turnover methods. Globally, the phylogenetic...
William T Stanley
Full Text Available Mt Kilimanjaro is Africa's highest mountain, and an icon for a country famous for its mammalian fauna. The distribution and abundance of small mammals on the mountain are poorly known. Here we document the distribution of shrews and rodents along an elevational gradient on the southeastern versant of Kilimanjaro. Five sites were sampled with elevational center points of 2000, 2500, 3000, 3500 and 4000 m, using a systematic methodology of standard traps and pitfall lines, to inventory the shrews and rodents of the slope. Sixteen species of mammal were recorded, including 6 shrew and 10 rodent species, and the greatest diversity of both was found at 3000 m, the elevational midpoint of the transect. No species previously unrecorded on Kilimanjaro were observed. Two genera of rodents that occur in nearby mountains (Hylomyscus and Beamys were not recorded. Myosorex zinki, the only mammal endemic to Mt. Kilimanjaro, which previously was known by only a few specimens collected in the ericaceous or moorland habitat, was found in all but one (the lowest of the sites sampled, and was one of the most widespread species of small mammal along the gradient. Two shrews (Crocidura allex and Sylvisorex granti and one rodent (Dendromus insignis were found throughout the entire transect, with Dendromus being observed at our highest trap point (4240 m. As in similar faunal surveys on other mountains of Tanzania, rainfall influenced the sample success of shrews, but not rodents. Trap success for rodents at 3500 m was notably low. This study contributes further justification for the conservation of the forest habitat of Mt. Kilimanjaro.
Liu, Wen-Xiu; He, Wei; Qin, Ning; Kong, Xiang-Zhen; He, Qi-Shuang; Yang, Bin; Yang, Chen; Jorgensen, Sven Erik; Xu, Fu-Liu
To investigate the residues, compositions, distributions and potential ecological risks of perfluoroalkyl acids (PFAAs), water samples were collected seasonally between August 2011 and November 2012 from 20 sites in Lake Chaohu and its tributary rivers. The mean concentration of total PFAAs (TPFAAs...
Martínez-García, Blanca; Pascual, Ana; Rodríguez-Lázaro, Julio; Martín-Rubio, Maite; Rofes, Juan
Recent ostracods from the Tina Menor estuary (northern Spain, southern Bay of Biscay) have been analysed. Twenty-five species have been identified for the first time, 20 with living individuals during the sampling period. The most abundant species are Leptocythere castanea, Leptocythere porcellanea, Loxoconcha elliptica, Cytherois fischeri, and Hemicytherura hoskini, Leptocythere psammophila and Semicytherura aff. angulata. These species are grouped into four assemblages defining different environments: muddy inner estuary with euryhaline species (L. elliptica); middle estuary with silty sand flats and low marsh environments (L. castanea, L. porcellanea and C. fischeri); sandy outer estuary with marine characteristics (H. hoskini, S. aff. angulata, Leptocythere baltica and L. psammophila); and littoral to inner shelf environment (Caudites calceolatus, H. hoskini and Callistocythere murrayi). In the middle estuary, L. castanea also delimits sandy-silty low marshes, and L. porcellanea and C. fischeri the vegetated ecosystems. Multivariate analyses with the samples and species (cluster Q-type and detrended and canonical correspondence analysis) confirm that ostracod distribution in the Tina Menor estuary is controlled by sediment grain size and by the distance to the mouth of the estuary (associated to salinity). The geographical height in relation with mean tide levels (and therefore with emersion periods) also plays an important role in distribution. The results of this study confirm ostracod validity as tide-level markers due to the presence of C. fischeri below the MHWNT (mean high water neap tide), whereas L. castanea and L. porcellanea are present between the MHWNT and MHW (mean high water) levels. Ostracods can also indicate environmental changes due to human-influenced processes. Abundant individuals of L. elliptica in some areas of the middle estuary evidence discharges of lower-salinity water from a nearby fish farm. Ostracods from the marine shelf reach the
Masters, Sheldon; Wang, Hong; Pruden, Amy; Edwards, Marc A
Simulated distribution systems (SDSs) defined the interplay between disinfectant type (free chlorine and chloramines), water age (1-10.2 days), and pipe material (PVC, iron and cement surfaces) on water chemistry, redox zones and infrastructure degradation. Redox gradients developed as a function of water age and pipe material affected the quality of water consumers would receive. Free chlorine was most stable in the presence of PVC while chloramine was most stable in the presence of cement. At a 3.6 day water age the residual in the chlorinated PVC SDS was more than 3.5 times higher than in the chlorinated iron or cement systems. In contrast, the residual in the chloraminated cement SDS was more than 10 times greater than in the chloraminated iron or PVC systems. Near the point of entry to the SDSs where disinfectant residuals were present, free chlorine tended to cause as much as 4 times more iron corrosion when compared to chloramines. Facultative denitrifying bacteria were ubiquitous, and caused complete loss of nitrogen at distal points in systems with iron, and these bacteria co-occurred with very severe pitting attack (1.6-1.9 mm/year) at high water age. PMID:25462724
Full Text Available From August 1981 to July 2007, 200 inland water bodies were sampled to gather information on the Recent ostracod fauna of Friuli Venezia Giulia (NE Italy. A total of 320 samples were collected from surface, interstitial and ground waters. Whenever possible, ostracod identification was performed at species level based on the morphology of both valves and limbs. Seventy-four taxa in 30 genera belonging to 9 different families (Darwinulidae, Candonidae, Ilyocyprididae, Notodromadidae, Cyprididae, Limnocytheridae, Cytheridae, Leptocytheridae and Xestoleberididae were identified. The maximum number of taxa per site was seven. The most common species was Cypria ophthalmica (133 records, followed by Cyclocypris ovum (86 records, C. laevis (49 records, Cypridopsis vidua (40 records and Notodromas persica (28 records. Of particular relevance is the occurrence of six species new to Italy: Microdarwinula zimmeri, Penthesilenula brasiliensis, Fabaeformiscandona wegelini, Pseudocandona semicognita, Candonopsis scourfieldi, and C. mediosetosa. Scanning electron microscopy images of valves are provided for most of the described taxa. Geographical distribution of ostracods and their occurrence in relation to environmental variables were examined. The results of this study indicate that Friuli Venezia Giulia hosts a very diverse ostracod fauna, representing a significant proportion of all ostracod taxa known thus far from Italy.
Zomuanpuii, Rita; Guruswami, Gurusubramanian; Nachimuthu, Senthil Kumar
A systematic survey on Anopheline species abundance, bionomics and habitat preference was conducted for three years in Thenzawl, Mizoram. A scoop-net method was employed for larval collection and a local made killing-jar for adults. A total of 10 species Anopheles campestris (25.8%), An. nivipes (24.0%), An. vagus (20.6%), An. jamesii (15.1%), An. jeyporiensis (11.4%), An. maculatus (1.7%), An. philippinensis (0.7%), An. annularis (0.26%), An. sinensis (0.23%) and An. peditaeniatus (0.22%) were collected. The survey site having thick tall grasses, numerous rural-huts as residents, small to relatively larger ponds and very slow running water bodies well shaded from sunlight with floating aquatic plants provided the largest area for Anopheles larvae breeding and accounted for 40% of all Anopheles larva and 25.4% total Anopheles spp. collected. An. campestris (NSK01), maculatus (NSK04), philippinensis (NSK06), nivipes (NSK10) and jeyporiensis (NSK09) were strongly anthropogenic and endophagic while vagus (NSK18) and jamesii (NSK03) were found to be highly zoophilic and exophilic and An. peditaeniatus (NSK02), annularis (NSK07) and sinensis (NSK15) were found to be highly zoophilic. Because of its abundance and bionomics, An. campestris, jeyporiensis and nivipes may have played a role in malarial transmission throughout the year. This is the first study reported on Anopheline distribution and abundance in Thenzawl, Mizoram. PMID:24665764
Full Text Available Bacteria assigned to the genus Weissella are Gram-positive, catalase-negative, non-endospore forming cells with coccoid or rod-shaped morphology (Collins et al., 1993, Björkroth et al., 2009, 2014 and belong to the group of bacteria generally known as lactic acid bacteria. Phylogenetically, the Weissella belong to the Firmicutes, class Bacilli, order Lactobacillales and family Leuconostocaceae (Collins et al., 1993. They are obligately heterofermentative, producing CO2 from carbohydrate metabolism with either d(--, or a mixture of D(-- and L(+- lactic acid and acetic acid as major end products from sugar metabolism.To date, there are 19 validly described Weissella species known. Weissella spp. have been isolated from and occur in a wide range of habitats e.g. on the skin and in the milk and feces of animals, from saliva, breast milk, feces and vagina of humans, from plants and vegetables, as well as from a variety of fermented foods such as European sourdoughs and Asian and African traditional fermented foods. Thus, apart from a perceived technical role of certain Weissella species involved in such traditional fermentations, specific Weissella strains are also receiving attention as potential probiotics, and strain development of particularly W. cibaria strains is receiving attention because of their high probiotic potential for controlling periodontal disease. Moreover, W. confusa and W. cibaria strains are known to produce copius amounts of novel, non-digestible oligosaccharides and extracellular polysaccharides, mainly dextran. These polymers are receiving increased attention for their potential application as prebiotics and for a wide range of industrial applications, predominantly for bakeries and for the production of cereal-based fermented functional beverages. On the detrimental side, strains of certain Weissella species, e.g. of W. viridescens, W. cibaria and W. confusa, are known as opportunistic pathogens involved in human infections while strains of
Fusco, Vincenzina; Quero, Grazia M; Cho, Gyu-Sung; Kabisch, Jan; Meske, Diana; Neve, Horst; Bockelmann, Wilhelm; Franz, Charles M A P
Bacteria assigned to the genus Weissella are Gram-positive, catalase-negative, non-endospore forming cells with coccoid or rod-shaped morphology (Collins et al., 1993; Björkroth et al., 2009, 2014) and belong to the group of bacteria generally known as lactic acid bacteria. Phylogenetically, the Weissella belong to the Firmicutes, class Bacilli, order Lactobacillales and family Leuconostocaceae (Collins et al., 1993). They are obligately heterofermentative, producing CO2 from carbohydrate metabolism with either d(-)-, or a mixture of d(-)- and l(+)- lactic acid and acetic acid as major end products from sugar metabolism. To date, there are 19 validly described Weissella species known. Weissella spp. have been isolated from and occur in a wide range of habitats, e.g., on the skin and in the milk and feces of animals, from saliva, breast milk, feces and vagina of humans, from plants and vegetables, as well as from a variety of fermented foods such as European sourdoughs and Asian and African traditional fermented foods. Thus, apart from a perceived technical role of certain Weissella species involved in such traditional fermentations, specific Weissella strains are also receiving attention as potential probiotics, and strain development of particularly W. cibaria strains is receiving attention because of their high probiotic potential for controlling periodontal disease. Moreover, W. confusa and W. cibaria strains are known to produce copius amounts of novel, non-digestible oligosaccharides and extracellular polysaccharides, mainly dextran. These polymers are receiving increased attention for their potential application as prebiotics and for a wide range of industrial applications, predominantly for bakeries and for the production of cereal-based fermented functional beverages. On the detrimental side, strains of certain Weissella species, e.g., of W. viridescens, W. cibaria and W. confusa, are known as opportunistic pathogens involved in human infections while strains of W. ceti have been recently recongnized as etiological agent of "weissellosis," which is a disease affecting farmed rainbow trouts. Bacteria belonging to this species thus are important both from a technological, as well as from a medical point of view, and both aspects should be taken into account in any envisaged biotechnological applications. PMID:25852652
Fusco, Vincenzina; Quero, Grazia M.; Cho, Gyu-Sung; Kabisch, Jan; Meske, Diana; Neve, Horst; Bockelmann, Wilhelm; Franz, Charles M. A. P.
Bacteria assigned to the genus Weissella are Gram-positive, catalase-negative, non-endospore forming cells with coccoid or rod-shaped morphology (Collins et al., 1993; Björkroth et al., 2009, 2014) and belong to the group of bacteria generally known as lactic acid bacteria. Phylogenetically, the Weissella belong to the Firmicutes, class Bacilli, order Lactobacillales and family Leuconostocaceae (Collins et al., 1993). They are obligately heterofermentative, producing CO2 from carbohydrate metabolism with either d(−)-, or a mixture of d(−)- and l(+)- lactic acid and acetic acid as major end products from sugar metabolism. To date, there are 19 validly described Weissella species known. Weissella spp. have been isolated from and occur in a wide range of habitats, e.g., on the skin and in the milk and feces of animals, from saliva, breast milk, feces and vagina of humans, from plants and vegetables, as well as from a variety of fermented foods such as European sourdoughs and Asian and African traditional fermented foods. Thus, apart from a perceived technical role of certain Weissella species involved in such traditional fermentations, specific Weissella strains are also receiving attention as potential probiotics, and strain development of particularly W. cibaria strains is receiving attention because of their high probiotic potential for controlling periodontal disease. Moreover, W. confusa and W. cibaria strains are known to produce copius amounts of novel, non-digestible oligosaccharides and extracellular polysaccharides, mainly dextran. These polymers are receiving increased attention for their potential application as prebiotics and for a wide range of industrial applications, predominantly for bakeries and for the production of cereal-based fermented functional beverages. On the detrimental side, strains of certain Weissella species, e.g., of W. viridescens, W. cibaria and W. confusa, are known as opportunistic pathogens involved in human infections while strains of W. ceti have been recently recongnized as etiological agent of “weissellosis,” which is a disease affecting farmed rainbow trouts. Bacteria belonging to this species thus are important both from a technological, as well as from a medical point of view, and both aspects should be taken into account in any envisaged biotechnological applications. PMID:25852652
Nicolaci A; Travaglini D; Menguzzato G; Nocentini S; Veltri A; Iovino F
The most well-known and vast Calabrian pine forests are in the Sila mountain range, southern Italy. In this paper, present-day distribution of Calabrian pine in the Sila district was analyzed and compared with forest maps dating back to 1935 in order to assess the changes in land use. Main ecological and anthropogenic factors affecting Calabrian pine forest distribution were investigated by logistic regression models to identify the most important predictors of Calabrian pine persistence, ex...
Full Text Available Abstract Three dormouse species are recorded in Sicily: Myoxus glis, Muscardinus avellanarius and Eliomys quercinus. Their distribution is mapped according to the 10 x 10 km squares of the UTM grid. Data were collected until May 1993, mostly coming from pellet analysis, and direct records (vocalization listening, museum specimens, field observations, literature, etc.. The Fat dormouse (5.3% of 10 x 10 km squares and the Hazel dormouse (2.1% are mainly localized within deciduous wooded areas like the beech forests and the hazel groves mixed with oaks and chestnuts of Nebrodi and Madonie. The Fat dormouse is also present in south-eastern Sicily (Monti Iblei and on in Eolian island (Salina. The Garden dormouse shows the widest distribution (21.2%, ranging from sea level to the beech forests (1600 m a.s.1.. Dormice are rarely preyed upon by Owls in Sicily, generally forming less than 1.5% of the total prey, with the exception the Fat dormouse (5.3%. Other occasional predators, so far recorded, are the Red Fox (Vulpes vulpes and the Lanner (Falco biarmicus. Hibernation regularly occurs at high altitudes, but seems to be absent or curtailed in the warm habitats below 500 m a.s.1. Riassunto Distribuzione ed ecologia dei Mioxidi in Sicilia: dati preliminari - Tre specie di Mioxidi vivono in Sicilia (Myoxus glis, Muscardinus avellanarius, Eliomys quercinus. Storicamente (1850 essi erano presenti nelle principali aree boscate (Nebrodi, Madonie, Etna, solo nella metà di questo secolo, il Ghiro ed il Quercino furono scoperti alle isole Eolie (Salina e Lipari. Si riporta la carta di distribuzione di ogni specie (griglia UTM, 100 kmq ricavata dall'analisi della dieta di predatori, osservazioni dirette, trappolamenti ed esemplari citati in bibliografia o conservati nei musei. Il Ghiro (5,3% ed il Moscardino (2,1% sono localizzati nei
Afonso, C.L.; Kurath, Gael; 82 Additional Authors
In 2016, the order Mononegavirales was emended through the addition of two new families (Mymonaviridae and Sunviridae), the elevation of the paramyxoviral subfamily Pneumovirinae to family status (Pneumoviridae), the addition of five free-floating genera (Anphevirus, Arlivirus, Chengtivirus, Crustavirus, and Wastrivirus), and several other changes at the genus and species levels. This article presents the updated taxonomy of the order Mononegavirales as now accepted by the International Committee on Taxonomy of Viruses (ICTV).
Johnson, Colin G.; Fuller, Ursula
Bloom's taxonomy attempts to provide a set of levels of cognitive engagement with material being learned. It is usually presented as a generic framework. In this paper we outline some studies which examine whether the taxonomy is appropriate for computing, and how its application in computing might differ from its application elsewhere. We place this in the context of ongoing debates concerning graduateness and attempts to benchmark the content of a computing degree.
This thesis called "Taxonomy of cloud services" deals with description and categorization of services in the field of cloud computing. It aims to theoretically describe and approach this whole provisioning of ICT services model, to analyze the two leading providers of cloud services, and bring a new perspective on its taxonomy. The theoretical part defines the term cloud computing, its definition and a brief description of the history. Attention is paid to individual components, characteristi...
In this paper I discuss some of the ethical issues relating to the use of mobile technologies in education. I argue that the frames of reference used by educators and technologists fail to capture the nature, scope and impact of ethical issues in mobile learning. A taxonomy of ethical issues based on dominant positions in meta-ethical moral theory is proposed. Using categories from the Mobile Technologies in Lifelong Learning (MOTILL) project, I show how this taxonomy can be applied in suc...
Sirlene Aparecida Felisberto
Full Text Available AIM: This study aimed to evaluate the influence of river-dam axis and abiotic factors on the composition of Closteriaceae, Gonatozygaceae, Mesotaeniaceae and Peniaceae in a tropical reservoir METHODS: Water samples for physical, chemical and periphyton analysis were collected in April and August 2002 in different regions along the axis of the river-dam of Rosana Reservoir, River Basin Paranapanema. The substrates collected, always in the litoranea region, were petioles of Eichhornia azurea (Swartz Kunth. To examine the relationship of abiotic variables with reservoir zones and between the floristic composition of desmids, we used principal component analysis (PCA and canonical correspondence analysis (CCA RESULTS: The results of the PCA explained 81.3% of the total variability in the first two axes. In the first axis, the variables of conductivity, water temperature and the pH were related to the sampling regions of April with higher values, while for the month of August, nitrate, total phosphorus and dissolved oxygen showed higher values. We identified 20 taxa, distributed in the genera Closterium (14, Gonatozygon (4, Netrium (1 and Penium (1. Spatially, the higher taxa were recorded in the lacustrine region for both collection periods. The canonical correspondence analysis (CCA summarized 62.2% of total data variability of taxa in the first two axes, and in August, Closterium incurvum Brébisson, C. cornu Ehrenberg ex Ralfs and Gonatozygon monotaenium De Bary, were related to higher values of turbidity and nitrate to the lacustrine and intermediate regions CONCLUSION: Thus, the formation of groups was due to the regions along the longitudinal axis, then the seasonal period, which must be related to the low current velocity, the higher values of temperature and the water transparency, especially in late summer
Full Text Available Extended abstract1-IntroductionInequality of green space distribution is a type of social production which by creating uneven ecological conditions in a feedback cycle plays its role on the quality of environment and intensification of imbalances inside the urban living environment. Most of the studies conducted so far have focused on the development or distribution of public green space but the truth is that public green spaces have not been the only source of urban metabolism (from the viewpoint of green space function and a great part of the role of urban green space is undertaken by private green spaces. “What effect do private greeneries located in residential areas have on the quality of citizens’ life or what kind of reality is asserted by their development and distribution pattern in the urban life of today’s modern society” were issues of less attention. Thus, considering the interconnection of green space production and distribution pattern (public and private with the rest of natural, social, economic and fabric conditions, the present research benefits from NDVI (Normalized Difference Vegetation Index as a dependent variable which has been influenced by ecological, social, fabric and economic variables and has analyzed them to identify effective factors in Tehran inequality urban green space. The present article theoretically makes use of urban political ecology approach and is considered a correlational research. The required data have been prepared and analyzed by some types of software such as ArcGIS, ArcView, IDRISI, ERDAS Imagine, and SPSS. In conducting this research some techniques have been used such as; “Average Distance to Nearest Neighbor”, “Square Analysis”, “Correlational Analysis and Factor Analysis”. 2-Theoretical basis The present study is theoretically based on an urban political ecology approach. Urban components including green space from urban political ecological perspective are considered a
We write with the firm conviction that taxonomic research forms the essential foundation for all other areas of investigation within the field of biology. This has been well demonstrated in the Tephritidae and is a position at which we have arrived through many years' experience in fruit fly systematic research covering taxonomy, behaviour, biology, ecology and pest control. The importance of sound taxonomic research is highlighted at this time by the known presence of many sibling species complexes across the family. Within the Dacinae, for example, major pest species often occur within groups of closely related species, most of which are not pests. The dorsalis complex of Southeast Asia and the musae complex of Papua New Guinea are examples. Tephritid taxonomy has a long history (over two centuries) and rich heritage with some 4,500 species having been described since the mid-1700s. This research has been carried out in major research centres around the world and particularly in Australia, Europe, Hawaii, mainland USA and South Africa. In Mexico in February 1998, a significant meeting was held on the biology/behaviour and taxonomy of Tephritidae. Specialist researchers in this area presented valuable and interesting data on 'Phylogeny and Evolution of Behaviour' in fruit flies. In summarising current knowledge on the taxonomy and biology of the Tephritidae, the meeting highlighted the outstanding achievements of taxonomy in its contributions to both basic research and pest management programmes over many decades of tephritid studies world-wide. This presentation provides a link between the meetings in Mexico and Penang and enables us to present a summary of our current knowledge and genuine valuable applications of tephritid taxonomy to the overall fruit fly research and pest management effort. In doing this, this presentation also fits into the theme of this conference in Penang, 'Fruit Flies- current global scenario'
First Record of Transversotrema Witenberg, 1944 (Digenea) from the Americas, with Comments on the Taxonomy of Transversotrema patialense (Soparkar, 1924) Crusz and Sathananthan, 1960, and an Updated List of Its Hosts and Geographic Distribution.
Womble, Matthew R; Cox-Gardiner, Stephanie J; Cribb, Thomas H; Bullard, Stephen A
Specimens of Transversotrema patialense (sensu lato) ( Soparkar, 1924 ) Crusz and Sathananthan, 1960 (Digenea: Transversotrematidae) infected the skin (epidermal spaces beneath scales near pectoral fins) of 4 of 126 (prevalence 3%; mean intensity 1.8) zebrafish ( Danio rerio (Hamilton, 1822) [Cypriniformes: Cyprinidae]) purchased in 2009 and cultured by a California (USA) fish supplier. These fish were sold as "laboratory-reared" and "specific pathogen free," purportedly raised in a recirculating aquaculture system that included zebrafish only. We herein describe the morphological features of this transversotrematid using light and scanning electron microscopy, provide a comprehensive list of hosts (snails and fishes) and geographic locality records for specimens reported as T. patialense, which is perhaps a species complex, and provide a brief historical synopsis of the taxonomic and life history research that has been conducted on this fluke. No species of Transversotrema previously had been reported from the Americas; however, this discovery is not surprising given that: (1) a suitable intermediate host (red-rimmed melania, Melanoides tuberculata (Müller, 1774) [Cerithioidea: Thiaridae]) has been established in California and elsewhere in North America, (2) the zebrafish is a susceptible definitive host, and (3) T. patialense reportedly matures on a broad ecological and phylogenetic spectrum of freshwater fishes. To our knowledge, this is the northern-most geographic locality record for a species of this genus. We suspect this case study represents an example of a parasite that may now be established in North America by the fortuitous co-occurrence of a susceptible, exotic snail host (the red-rimmed melania) and a susceptible, widely distributed, exotic fish host (the zebrafish). PMID:26335181
Full Text Available Ecological niche modeling is an important tool to evaluate the spatial distribution of terrestrial species, however, its applicability has been little explored in the aquatic environment. Microcystis sp., a species of cyanobacteria, is widely recognized for its ability to produce a group of toxins known as microcystins, which can cause death of animals as fish, birds and mammals depending on the amount of toxin absorbed. Like any taxonomic group, cyanobacteria has environmental thresholds, therefore, a suitable ecological niche will define their distribution. This study was conducted in Aguamilpa Hydroelectric Reservoir, an artificial ecosystem that started operations in 1994. In this system we evaluated the potential distribution of Microcystis sp., by generating a prediction model based on the concept of ecological niche MAXENT, using a Digital Elevation Model in cells of 100 m x 100 m (1 ha spatial resolution and monitoring eleven physicochemical and biological variables and nutrients in water. The distribution maps were developed using ArcMap 9.2®. The results indicated that Microcystis sp., is distributed mainly in the upper tributary basin (Huaynamota basin during the dry season. There was less chance to find cyanobacteria in the entire system during the cold dry season, while during the warm dry season cyanobacteria was recognized at the confluence of two rivers. During the rainfall season there were no reports of cyanobacteria presence. This species is often associated with arising trophic processes of anthropogenic origin; therefore, attention is required in specific areas that have been identified in this work to improve Aguamilpa’s watershed management and restoration. It was also recognized the importance of phosphorus and nitrogen interaction, which determines the distribution of Microcystis sp., in the Aguamilpa Reservoir. The results of this study demonstrated that ecological niche modeling was a suitable tool to assess the
Full Text Available This investigation analyzed the ecological distribution and population structure of A. schmitti on the southeastern coast of Brazil. Crabs were sampled monthly from January 1998 to December 1999 at the following bays: Ubatumirim (UBM, Ubatuba (UBA and Mar Virado (MV. Water and sediment samples were also collected from all sampling sites for an analysis of environmental factors. Acantholobus schmitti was most abundant at UBM (224, followed by UBA (154 and MV (23 but its abundance showed no association with the environmental factors analyzed. The low abundance of these crabs in MV may be due to the high wave action that moved biodetritic material accumulated on the bottom and frequently removed small crabs from their sheltered positions among the shell fragments. The individuals captured included 269 males and 132 females, of which only 4 specimens were brooding females. Juvenile recruitment occurred throughout the year, but was less intense in the spring. The major abundance of individuals as well as of ovigerous females occurred during 1999, when the entrance of the South Atlantic Central Waters (SACW was stronger than in previous year. This environmental influence could be the main factor modulating this population.
Vogt, M.; Hashioka, T.; Payne, M. R.; Buitenhuis, E. T.; Le Quéré, C.; Alvain, S.; Aita, M. N.; Bopp, L.; Doney, S. C.; Hirata, T.; Lima, I.; Sailley, S.; Yamanaka, Y.
We compare the spatial and temporal representation of phytoplankton functional types (pPFTs) in four different Dynamic Green Ocean Models (DGOMs; CCSM-BEC, NEMURO, PISCES and PlankTOM5) to derived phytoplankton distributions from two independent satellite estimates, with a particular focus on diatom distributions. Global annual mean surface biomass estimates for diatoms vary between 0.23 mmol C m-3 and 0.77 mmol C m-3 in the models, and are comparable to a satellite-derived estimate (0.41 mmol C m-3). All models consistently simulate a higher zonal mean diatom biomass contribution in the high latitudes than in the low latitudes, but the relative diatom contribution varies substantially between models with largest differences in the high latitudes (20% to 100% of total biomass). We investigate phytoplankton distribution in terms of annual and monthly mean dominance patterns, i.e. the distribution of locations where a given PFT contributes more than 50% to total biomass. In all models, diatoms tend to dominate large areas of the high latitudes of both hemispheres, and the area of the surface ocean dominated by diatoms is significantly higher in the models than in the satellite estimates. We estimate the realized ecological niches filled by the dominant pPFT at each location as a function of annual mean surface nitrate concentration (NO3), sea surface temperature (SST), and mixed layer depth. A general additive model (GAM) is used to map the probability of dominance of all pPFTs in niche and geographic space. Models tend to simulate diatom dominance over a wider temperature and nutrient range, whereas satellites confine diatom dominance to a narrower niche of low-intermediate annual mean temperatures (annual mean SST niches in different ranges of surface NO3 concentrations. For annual mean diatom dominance, the statistically modelled probability of dominance explains the majority of the variance in the data (65.2-66.6%). For the satellite estimates, the explained
Chakrabarti, Anirikh; Siddharth, Jay; Lauber, Christian L; Membrez, Mathieu; Betrisey, Bertrand; Loyer, Carole; Chou, Chieh Jason; Pataky, Zoltan; Golay, Alain; Parkinson, Scott J
Development of NGS has revolutionized the analysis in microbial ecology contributing to our deeper understanding of microbiota in health and disease. However, the quality, quantity and confidence of summarized taxonomic abundances are in need of further scrutiny due to sample dependent and independent effects. In this article we introduce 'AVIT (Abundance and Variability In Taxonomy), an unbiased method to enrich for assigned members of microbial communities. As opposed to using a priori thresholds, 'AVIT uses inherent abundance and variability of taxa in a dataset to determine the inclusion or rejection of each taxa for further downstream analysis. Using in-vitro and in-vivo studies, we benchmarked performance and parameterized 'AVIT to establish a framework for investigating the dynamic range of microbial community membership in clinically relevant scenarios. PMID:27530237
This book outlines the basic principles of creation and maintenance of taxonomies and thesauri. It also provides step by step instructions for building a taxonomy or thesaurus and discusses the various ways to get started on a taxonomy construction project.Often, the first step is to get management and budgetary approval, so I start this book with a discussion of reasons to embark on the taxonomy journey. From there I move on to a discussion of metadata and how taxonomies and metadata are related, and then consider how, where, and why taxonomies are used.Information architecture has its corner
Full Text Available Aquatic ecoregions were increasingly used as spatial units for aquatic ecosystem management at the watershed scale. In this paper, the principle of including land area, comprehensiveness and dominance, conjugation and hierarchy were selected as regionalizing principles. Elevation and drainage density were selected as the regionalizing indicators for the delineation of level I aquatic ecoregions, and percent of construction land area, percent of cultivated land area, soil type and slope for the level II. Under the support of GIS technology, the spatial distribution maps of the two indicators for level I and the four indicators for level II aquatic ecoregion delineation were generated from the raster data based on the 1,107 subwatersheds. River subbasin taxonomy concept, two-step spatial clustering analysis approach and manual-assisted method were used to regionalize aquatic ecosystems in the Taihu Lake watershed. Then the Taihu Lake watershed was divided into two level I aquatic ecoregions, including Ecoregion I1 and Ecoregion I2, and five level II aquatic subecoregions, including Subecoregion II11, Subecoregion II12, Subecoregion II21, Subecoregion II22 and Subecoregion II23. Moreover, the characteristics of the two level I aquatic ecoregions and five level II aquatic subecoregions in the Taihu Lake watershed were summarized, showing that there were significant differences in topography, socio-economic development, water quality and aquatic ecology, etc. The results of quantitative comparison of aquatic life also indicated that the dominant species of fish, benthic density, biomass, dominant species, Shannon-Wiener diversity index, Margalef species richness index, Pielou evenness index and ecological dominance showed great spatial variability between the two level I aquatic ecoregions and five level II aquatic subecoregions. It reflected the spatial heterogeneities and the uneven natures of aquatic ecosystems in the Taihu Lake watershed.
D.Umavathi M.Sc1 , R.Tamil selvi M.Sc., M.Phil
Full Text Available Data integration is the major important task for online commercial portals and commerce search engine based applications. The data integration task faced by online commercial portals and e-commerce search engines are the integration of products coming from multiple providers to their product catalogs. Categorization of products from the data provides into the master taxonomy and whereas make use of the data provider taxonomy information becomes major problem. Overcome this problem we classify the products based on their textual based classifier and taxonomy-aware step that adjusts the results of a textual based classifier to ensure that products that are close together in the provider taxonomy remain close in the master taxonomy. In taxonomy aware calibration step the base classifier derives the parameters value by tuning the values. Existing base classifier step, still it becomes major problem identify candidate products for labeling the products, to overcome these problem we proposed a Semi supervised learning techniques to incrementally retrain the base classifier with elements chosen during the taxonomy-aware calibration step. Proposed system it categorizes the product based on their parameters choosen from calibration. Semi supervised learning algorithm involves a large amount of unlabeled product data with only a small number of labeled product data. Semisupervised based active learning method identifies the candidate products for labeling. Proposed system finds the each candidate parameter ࣂ and then find the optimal parameter ࢽ such that the improve the accuracy on the validation set is maximized. An experimental result shows that the Semi supervised learning algorithm that are efficient and thus applicable to the large data sets that are typical on the web.
Halawi, Leila A.; McCarthy, Richard V.; Pires, Sandra
Universities have rushed to expand their delivery of courses through e-learning environments. But is e-learning effective? The authors conducted an exploratory study to evaluate e-learning through WebCT on the basis of Bloom's taxonomy. The authors distributed 75 questionnaires to investigate whether individual or instructional factors play an…
Onnela, Jukka-Pekka; Fenn, Daniel J.; Reid, Stephen; Porter, Mason A.; Mucha, Peter J.; Fricker, Mark D.; Jones, Nick S.
The study of networks has become a substantial interdisciplinary endeavor that encompasses myriad disciplines in the natural, social, and information sciences. Here we introduce a framework for constructing taxonomies of networks based on their structural similarities. These networks can arise from any of numerous sources: They can be empirical or synthetic, they can arise from multiple realizations of a single process (either empirical or synthetic), they can represent entirely different systems in different disciplines, etc. Because mesoscopic properties of networks are hypothesized to be important for network function, we base our comparisons on summaries of network community structures. Although we use a specific method for uncovering network communities, much of the introduced framework is independent of that choice. After introducing the framework, we apply it to construct a taxonomy for 746 networks and demonstrate that our approach usefully identifies similar networks. We also construct taxonomies within individual categories of networks, and we thereby expose nontrivial structure. For example, we create taxonomies for similarity networks constructed from both political voting data and financial data. We also construct network taxonomies to compare the social structures of 100 Facebook networks and the growth structures produced by different types of fungi.
Palacz, Artur; St. John, Michael; Brevin, R.J.W.;
Modeling and monitoring plankton functional types (PFTs) is challenged by insufficient amount of field measurements to ground-truth both plankton models and bio-optical algorithms. In this study, we combine remote sensing data and a dynamic plankton model to simulate an ecologically-sound spatial...... and remote sensing measurements, was so far not captured by state-of-the-art dynamic models which struggle to resolve this "paradox of the plankton". We conclude that an ecological indicator approach is useful for ecological modeling of phytoplankton and potentially higher trophic levels. Finally, we...
Langford, Gabriel J; Janovy, John
The lungworm Rhabdias joaquinensis (Nematoda: Rhabdiasidae) is a common parasite of anurans in eastern Nebraska, yet absent from the same hosts in western Nebraska. This study investigated the ecology of the lungworm's free-living stages that reside in host feces and surrounding soils to establish the worm's free-living niche in eastern Nebraska. Using a comparative method, this study also investigated the absence of lungworms in western Nebraska's Sandhills. Soil composition, moisture, and temperature were experimentally varied in the laboratory to assess their effects on juvenile development and survival. Field mesocosm and host defecation experiments were used to determine where in nature lungworms survive and eventually infect frogs and toads and to discover if vegetation facilitates lungworm transmission to hosts. The results found loam soils were amenable to lungworm development, whereas soils with high clay or sand content produced few infective lungworms. Soil moisture <50 % did not support lungworm development. Infective juveniles successfully developed between 5 and 35 °C, albeit at different rates, whereas only a limited number of non-infective worms developed at 40 °C. Field studies found that shoreline environments supported lungworm development, and the majority of lungworm infections appear to occur within a zone of infection adjacent to shorelines in eastern Nebraska. The prevalence in vegetation mesocosms was 100 %, and a significantly higher mean abundance was found in toads from containers with vegetation than without. Overall, these experiments suggest that the spatial distribution of R. joaquinensis in Nebraska is constrained by the worm's ability to survive and reproduce in a soil matrix. PMID:26666887
SAHA, AMRITA; Indurthi, Sathish; Godbole, Shantanu; Rongali, Subendhu; Raykar, Vikas C.
We describe the problem of aggregating the label predictions of diverse classifiers using a class taxonomy. Such a taxonomy may not have been available or referenced when the individual classifiers were designed and trained, yet mapping the output labels into the taxonomy is desirable to integrate the effort spent in training the constituent classifiers. A hierarchical taxonomy representing some domain knowledge may be different from, but partially mappable to, the label sets of the individua...
Panko, Raymond R.
The purpose of this paper is to revisit the Panko-Halverson taxonomy of spreadsheet errors and suggest revisions. There are several reasons for doing so: First, the taxonomy has been widely used. Therefore, it should have scrutiny; Second, the taxonomy has not been widely available in its original form and most users refer to secondary sources. Consequently, they often equate the taxonomy with the simplified extracts used in particular experiments or field studies; Third, perhaps as a consequ...
Fuller, Ursula; Johnson, Colin G.; Ahoniemi, Tuukka; Cukierman, Diana; Hernán-Losada, Isidoro; Jackova, Jana; Lahtinen, Essi; Lewis, Tracy L.; McGee Thompson, Donna; Riesdel, Charles; Thompson, Errol
Bloom's taxonomy of the cognitive domain and the SOLO taxonomy are being increasingly widely used in the design and assessment of courses, but there are some drawbacks to their use in computer science. This paper reviews the literature on educational taxonomies and their use in computer science education, identifies some of the problems that arise, proposes a new taxonomy and discusses how this can be used in application-oriented courses such as programming.
Hou, Zehai; Li, Qinglong; Yang,Mingsheng; Liu, Yunxiang; Wei, Cong
The cicada Meimuna mongolica (Distant) (Hemiptera: Cicadidae) is one of the most important pests of economic forest in Guanzhong Plain of Shaanxi Province, China. Information about ecological characteristics and some sustainable control measures of this species is urgently required for its control. In this study, nymphal instars, morphological variation, vertical distribution, and population density in soil, and emergence phenology of nymphs of M. mongolica on three main host plants (Pinus ta...
Enrique Martinez-Meyer; Humberto Macias-Cuellar; José de Anda; Fernando A. González-Farias; Gabriel Rangel-Peraza; José Luis Ibarra-Montoya
Ecological niche modeling is an important tool to evaluate the spatial distribution of terrestrial species, however, its applicability has been little explored in the aquatic environment. Microcystis sp., a species of cyanobacteria, is widely recognized for its ability to produce a group of toxins known as microcystins, which can cause death of animals as fish, birds and mammals depending on the amount of toxin absorbed. Like any taxonomic group, cyanobacteria has environmental thresholds, th...
Víkingsson, Gísli Arnór
Five species of baleen whales are regularly encountered at their feeding grounds in Icelandic waters during summer. Systematic monitoring of distribution and abundance of cetaceans in Icelandic and adjacent waters was initiated in 1987 as a part of the North Atlantic Sightings Surveys (NASS). In this thesis, the objecive is to summarize the results of these surveys in relation to changes in the marine environment and the feeding ecology of four baleen whale species. The results presented ...
Olsen, Daniel; Kiliccote, Sila; Sohn, Michael; Dunn, Laura; Piette, Mary, A
Demand response resources are an important component of modern grid management strategies. Accurate characterizations of DR resources are needed to develop systems of optimally managed grid operations and to plan future investments in generation, transmission, and distribution. The DOE Demand Response and Energy Storage Integration Study (DRESIS) project researched the degree to which demand response (DR) and energy storage can provide grid flexibility and stability in the Western Interconnection. In this work, DR resources were integrated with traditional generators in grid forecasting tools, specifically a production cost model of the Western Interconnection. As part of this study, LBNL developed a modeling framework for characterizing resource availability and response attributes of DR resources consistent with the governing architecture of the simulation modeling platform. In this report, we identify and describe the following response attributes required to accurately characterize DR resources: allowable response frequency, maximum response duration, minimum time needed to achieve load changes, necessary pre- or re-charging of integrated energy storage, costs of enablement, magnitude of controlled resources, and alignment of availability. We describe a framework for modeling these response attributes, and apply this framework to characterize 13 DR resources including residential, commercial, and industrial end-uses. We group these end-uses into three broad categories based on their response capabilities, and define a taxonomy for classifying DR resources within these categories. The three categories of resources exhibit different capabilities and differ in value to the grid. Results from the production cost model of the Western Interconnection illustrate that minor differences in resource attributes can have significant impact on grid utilization of DR resources. The implications of these findings will be explored in future DR valuation studies.
... Office of Energy Efficiency and Renewable Energy Measured Building Energy Performance Data Taxonomy... related to a measured building energy performance data taxonomy. DOE has created this measured building energy performance data taxonomy as part of its DOE Buildings Performance Database project....
Nieminen, Timo A.; Choi, Serene Hyun-Jin
Quantitative behaviour analysis requires the classification of behaviour to produce the basic data. This can be challenging when the theoretical taxonomy does not match observational limitations, or if a theoretical taxonomy is unavailable. Binary keys allow qualitative observation to be used to modify a theoretical taxonomy to produce a practical…
Levin, James A.
In the early 1990s, Chip Bruce created a taxonomy of education technology uses, which the author of the article helped to expand and evaluate. This taxonomy is based on John Dewey's "four impulses of the child": inquiry, construction, communication, and expression. This taxonomy has helped people interested in the uses of…
Carl, Michael; Dragsted, Barbara; Lykke Jakobsen, Arnt
While the translation profession becomes increasingly technological, we are still far from understanding how humans actually translate and how they could be best supported by machines. In this paper we outline a method which helps to uncover characteristics of human translation processes. Based o...... on the translators' activity data, we develop a taxonomy of translation styles. The taxonomy could serve to inform the development of advanced translation assistance tools and provide a basis for a felicitous and grounded integration of human machine interaction in translation....
Kenneth W. Cummins
Full Text Available Over the last fifty years, research on freshwater macroinvertebrates has been driven largely by the state of the taxonomy of these animals. In the great majority of studies conducted during the 2000s macroinvertebrates have been operationally defined by investigators as invertebrates retained by a 250 μ mesh in field sampling devices. Significant advances have been and continue to be made in developing ever more refined keys to macroinvertebrate groups. The analysis by function is a viable alternative when advances in macroinvertebrate ecological research is restricted by the level of detail in identifications. Focus on function, namely adaptations of macroinvertebrates to habitats and the utilization of food resources, has facilitated ecological evaluation of freshwater ecosystems (Functional feeding groups; FFG. As the great stream ecologist Noel Hynes observed, aquatic insects around the world exhibit similar morphologies and behaviors, even though they are in very different taxonomic groups. This is the basis for the FFG analysis that was initially developed in the early 1970s. FFG analysis applies taxonomy only to the level of detail that allows assignment to one of six FFG categories: scrapers adapted to feed on periphyton, detrital shredders adapted to feed on coarse (CPOM riparian-derived plant litter that has been colonized by microbes, herbivore shredders that feed on live, rooted aquatic vascular plants, filtering collectors adapted to remove fine particle detritus (FPOM from the water column, gathering collectors adapted to feed on FPOM where it is deposited on surfaces or in crevices in the sediments, and predators that capture live prey. The interacting roles of these FFGs in stream ecosystems were originally depicted in a conceptual model. Thus, there are a limited number of adaptations exhibited by stream macroinvertebrates that exploit these habitats and food resources. This accounts for the wide range of macroinvertebrate taxa
Kim, Sanghee; Ahmed, Saeema; Wallace, Ken
This paper presents a new taxonomy classification method that generates classification criteria from a small number of important sentences identified through semantic annotations, e.g. cause-effect. Rhetorical Structure Theory (RST) is used to discover the semantics (Mann et al. 1988). Specifically...
Since the family Pasteurellaceae was established in 1981 the taxonomy of this group of bacteria has undergone significant changes. 16S DNA sequencing showed in the early 1990-ties, that the three original genera were genetically heterogeneous. Presently, the family consists of 13 genetically...
Since the mid-1990s, however, the popularity, diversity, and application of virtual worlds have spread rapidly. As a result, existing taxonomies and topologies increasingly are becoming less effective at being able to classify and organize the growing diversification of content available in today's virtual worlds. This article presents the…
Frey, David H.; Raming, Henry E.
Taxonomies were generated from theorists in counseling and psychotherapy. Goal clusters included: Transfer of Therapy Learning to Outside Situations, Awareness and Acceptance of Self in Conflict, Specific Symptom Removal, and Awareness of Positive Inner Resources. Process clusters included: Client Acceptance, Active Critical Questioning, and…
Foray, D.; Grubler, A
The paper presents an approach towards a taxonomy of technological change focusing on the dynamic processes of technological diffusion. The objective of the approach is to develop a synthetic measure of the transformation of the diffusion characteristics during the very process of diffusion of a technological innovation.
Aremu, Bukola R; Babalola, Olubukola O
Macergens are bacteria capable of releasing pectic enzymes (pectolytic bacteria). These enzymatic actions result in the separation of plant tissues leading to total plant destruction. This can be attributed to soft rot diseases in vegetables. These macergens primarily belong to the genus Erwinia and to a range of opportunistic pathogens namely: the Xanthomonas spp., Pseudomonas spp., Clostridium spp., Cytophaga spp., and Bacillus spp. They consist of taxa that displayed considerable heterogeneity and intermingled with members of other genera belonging to the Enterobacteriaceae. They have been classified based on phenotypic, chemotaxonomic and genotypic which obviously not necessary in the taxonomy of all bacterial genera for defining bacterial species and describing new ones These taxonomic markers have been used traditionally as a simple technique for identification of bacterial isolates. The most important fields of taxonomy are supposed to be based on clear, reliable and worldwide applicable criteria. Hence, this review clarifies the taxonomy of the macergens to the species level and revealed that their taxonomy is beyond complete. For discovery of additional species, further research with the use modern molecular methods like phylogenomics need to be done. This can precisely define classification of macergens resulting in occasional, but significant changes in previous taxonomic schemes of these macergens. PMID:26640465
Bukola Rhoda Aremu
Full Text Available Macergens are bacteria capable of releasing pectic enzymes (pectolytic bacteria. These enzymatic actions result in the separation of plant tissues leading to total plant destruction. This can be attributed to soft rot diseases in vegetables. These macergens primarily belong to the genus Erwinia and to a range of opportunistic pathogens namely: the Xanthomonas spp, Pseudomonas spp., Clostridium spp., Cytophaga spp. and Bacillus spp. They consist of taxa that displayed considerable heterogeneity and intermingled with members of other genera belonging to the Enterobacteriaceae. They have been classified based on phenotypic, chemotaxonomic and genotypic which obviously not necessary in the taxonomy of all bacterial genera for defining bacterial species and describing new ones These taxonomic markers have been used traditionally as a simple technique for identification of bacterial isolates. The most important fields of taxonomy are supposed to be based on clear, reliable and worldwide applicable criteria. Hence, this review clarifies the taxonomy of the macergens to the species level and revealed that their taxonomy is beyond complete. For discovery of additional species, further research with the use modern molecular methods like phylogenomics need to be done. This can precisely define classification of macergens resulting in occasional, but significant changes in previous taxonomic schemes of these macergens.
Dawis, Rene V.; Lofquist, Lloyd H.
A new approach to the construction of a psychological taxonomy of work is presented. Based on the Theory of Work Adjustment, occupational aptitude patterns and occupational reinforcer-pattern clusters are cross-classified to develop psychologically homogeneous groups of occupations (Taxons). (Author)
Thomson, Deborah M.
The topic of defensiveness resonates with students, who are generally eager to learn how to prevent it. Gibb's taxonomy of defensive/supportive behaviors is widely published and used today. According to Gibb, defensiveness occurs when a communicator puts substantial effort into defending him/herself from a perceived communicative threat. This…
The taxonomy of fungi from the orders Tremellales, Auriculariales. Septobasidiales and related groups (Tulasnellales, Dacrymycetales, Exobasidiales, Sporobolomycetaceae) and the taxonomic position of these fungi within class Basidiomycetes is discussed. The author also presents ideas on the origin, evolution and age of tremellaceous fungi.