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Sample records for saggital optical tomography

  1. Optical Coherence Tomography

    DEFF Research Database (Denmark)

    Mogensen, Mette; Themstrup, Lotte; Banzhaf, Christina; Marschall, Sebastian; Andersen, Peter E.; Jemec, Gregor B. E. J.

    2014-01-01

    Optical coherence tomography (OCT) has developed rapidly since its first realisation in medicine and is currently an emerging technology in the diagnosis of skin disease. OCT is an interferometric technique that detects reflected and backscattered light from tissue and is often described as the optical analogue to ultrasound. The inherent safety of the technology allows for in vivo use of OCT in patients. The main strength of OCT is the depth resolution. In dermatology, most OCT research has tur...

  2. Dental Optical Coherence Tomography

    OpenAIRE

    Kun-Feng Lin; Jui-che Tsai; Ching-Cheng Chuang; Shyh-Yuan Lee; Yi-Ching Ho; Yao-Sheng Hsieh; Chia-Wei Sun

    2013-01-01

    This review paper describes the applications of dental optical coherence tomography (OCT) in oral tissue images, caries, periodontal disease and oral cancer. The background of OCT, including basic theory, system setup, light sources, spatial resolution and system limitations, is provided. The comparisons between OCT and other clinical oral diagnostic methods are also discussed.

  3. Dental Optical Coherence Tomography

    Directory of Open Access Journals (Sweden)

    Kun-Feng Lin

    2013-07-01

    Full Text Available This review paper describes the applications of dental optical coherence tomography (OCT in oral tissue images, caries, periodontal disease and oral cancer. The background of OCT, including basic theory, system setup, light sources, spatial resolution and system limitations, is provided. The comparisons between OCT and other clinical oral diagnostic methods are also discussed.

  4. Tracking optical coherence tomography

    OpenAIRE

    Ferguson, R. Daniel; Hammer, Daniel X.; Paunescu, Lelia Adelina; Beaton, Siobahn; Schuman, Joel S.

    2004-01-01

    An experimental tracking optical coherence tomography (OCT) system has been clinically tested. The prototype instrument uses a secondary sensing beam and steering mirrors to compensate for eye motion with a closed-loop bandwidth of 1 kHz and tracking accuracy, to within less than the OCT beam diameter. The retinal tracker improved image registration accuracy to

  5. Optical Coherence Tomography

    DEFF Research Database (Denmark)

    Andersen, Peter E.

    2015-01-01

    Optical coherence tomography (OCT) is a noninvasive imaging technique that provides real-time two- and three-dimensional images of scattering samples with micrometer resolution. Mapping the local reflectivity, OCT visualizes the morphology of the sample, in real time or at video rate. In addition, functional properties such as birefringence or blood flow may be detected and used for improved diagnosis. In ophthalmology, OCT is accepted as a clinical standard for diagnosing and monitoring the tre...

  6. Optical Tomography in Combustion

    DEFF Research Database (Denmark)

    Evseev, Vadim

    2013-01-01

    The new methodology of optical infrared tomography of flames and hot gas flows was developed in the PhD project with a view to future industrial applications. In particular, the methodology for the tomographic reconstruction of an axisymmetric lab flame temperature profile was developed and tested in the lab using Fourier transform infrared spectroscopy techniques, including a new tomographic measurement scheme, sweeping scanning, having great potential for industrial applications with limited o...

  7. Optical Tomography in Combustion

    DEFF Research Database (Denmark)

    Evseev, Vadim

    2013-01-01

    The new methodology of optical infrared tomography of flames and hot gas flows was developed in the PhD project with a view to future industrial applications. In particular, the methodology for the tomographic reconstruction of an axisymmetric lab flame temperature profile was developed and tested in the lab using Fourier transform infrared spectroscopy techniques, including a new tomographic measurement scheme, sweeping scanning, having great potential for industrial applications with limited optical access. The results were compared to the reference point measurements on the same flame and the deviations are discussed. The methods are shown to have promising potential for future industrial applications. The new multichannel infrared spectrometer system as a first prototype of the infrared spectroscopic tomography system was developed in the PhD project for simultaneous fast transient infrared spectral measurements at several line-of-sights with a view to applications for tomographic measurements on full-scale industrial combustion systems. The system was successfully applied on industrial scale for simultaneous fast exhaust gas temperature measurements in the three optical ports of the exhaust duct of the large Diesel engine. The results were compared to the measurements performed by another system employing spectral properties of nitric oxides in the ultraviolet range. A good agreement was observed between the results obtained using the two different systems. In the context of the PhD project, it was also important to investigate the spectral properties of major combustion species such as carbon dioxide and carbon monoxide in the infrared range at high temperatures to provide the theoretical background for the development of the optical tomography methods. The new software was developed for the line-by-line calculations of the transmission spectra of a carbon dioxide/carbon monoxide mixture which is able to use within reasonable time the most recent but huge CDSD-4000 database containing updated high-temperature spectroscopic line-by-line data. The software was used for the line-by-line calculations of the transmission spectra of the carbon dioxide/carbon monoxide mixture at high temperatures and the results were compared to the measurements in the high-temperature flow gas cell carried out before the PhD project. The results and discussion are presented in a journal article [Evseev et al. JQSRT 113 (2012) 2222, 10.1016/j.jqsrt.2012.07.015] included in the PhD thesis as an attachment. The knowledge and experience gained in the PhD project is the first important step towards introducing the advanced optical tomography methods of combustion diagnostics developed in the project to future industrial applications.

  8. Optical coherency matrix tomography

    Science.gov (United States)

    Kagalwala, Kumel H.; Kondakci, H. Esat; Abouraddy, Ayman F.; Saleh, Bahaa E. A.

    2015-10-01

    The coherence of an optical beam having multiple degrees of freedom (DoFs) is described by a coherency matrix G spanning these DoFs. This optical coherency matrix has not been measured in its entirety to date—even in the simplest case of two binary DoFs where G is a 4?×?4 matrix. We establish a methodical yet versatile approach—optical coherency matrix tomography—for reconstructing G that exploits the analogy between this problem in classical optics and that of tomographically reconstructing the density matrix associated with multipartite quantum states in quantum information science. Here G is reconstructed from a minimal set of linearly independent measurements, each a cascade of projective measurements for each DoF. We report the first experimental measurements of the 4?×?4 coherency matrix G associated with an electromagnetic beam in which polarization and a spatial DoF are relevant, ranging from the traditional two-point Young’s double slit to spatial parity and orbital angular momentum modes.

  9. Optical Coherence Tomography

    Science.gov (United States)

    Huang, David

    Optical coherence tomography (OCT) is a new method for noninvasive cross-sectional imaging in biological systems. In OCT, the longitudinal locations of tissue structures are determined by measuring the time-of-flight delays of light backscattered from these structures. The optical delays are measured by low coherence interferometry. Information on lateral position is provided by transverse scanning of the probe beam. The two dimensional map of optical scattering from internal tissue microstructures is then represented in a false-color or grayscale image. OCT is the optical analog of ultrasonic pulse-echo imaging, but with greatly improved spatial resolutions (a few microns). This thesis describes the development of this new high resolution tomographic imaging technology and the demonstration of its use in a variety of tissues under both in vitro and in vivo conditions. In vitro OCT ranging and imaging studies were performed using human ocular and arterial tissues, two clinically relevant examples of transparent and turbid media, respectively. In the anterior eye, precise measurements of cornea and anterior chamber dimensions were made. In the arterial specimens, the differentiation between fatty -calcified and fibromuscular tissues was demonstrated. In vivo OCT imaging in the retina and optic nerve head in human subjects was also performed. The delineation of retinal layers, which has not been possible with other noninvasive imaging techniques, is demonstrated in these OCT images. OCT has high spatial resolution but limited penetration into turbid tissue. It has potential for diagnostic applications where high resolution is needed and optical access is available, such as in the eye, skin, surgically exposed tissues, and surfaces that can be reached by various catheters and endoscopic probes. In particular, the measurement of fine retinal structures promises improvements in the diagnosis and management of glaucoma, macular edema and other vitreo-retinal diseases. (Copies available exclusively from MIT Libraries, Rm. 14-0551, Cambridge, MA 02139-4307. Ph. 617-253-5668; Fax 617-253 -1690.).

  10. Optical Coherence Tomography

    DEFF Research Database (Denmark)

    Andersen, Peter E.

    2015-01-01

    Optical coherence tomography (OCT) is a noninvasive imaging technique that provides real-time two- and three-dimensional images of scattering samples with micrometer resolution. Mapping the local reflectivity, OCT visualizes the morphology of the sample, in real time or at video rate. In addition, functional properties such as birefringence or blood flow may be detected and used for improved diagnosis. In ophthalmology, OCT is accepted as a clinical standard for diagnosing and monitoring the treatment of a wide range of retinal diseases. With increased image acquisition speed, real-time or video-rate imaging is feasible, which has enabled optical microangiography, i.e., visualization of retinal and chorodial blood flow. Such label-free optical microangiography might be feasible as an adjunct modality to fluorescence-based angiography. In this review, the fundamental principles of OCT imaging and its main functional extensions are introduced. The part is followed by a discussion of ophthalmic OCT. Finally potential emerging modalities are discussed briefly.

  11. [Optical coherence tomography].

    Science.gov (United States)

    von Braunmühl, T

    2015-07-01

    Optical coherence tomography (OCT) was introduced in the 1990s in dermatology and is nowadays established as a noninvasive high-resolution technique for the in vivo evaluation of the skin. To date several studies have been successfully demonstrated the application of OCT for various dermatological questions. The main indication for OCT in the daily practice is the noninvasive diagnosis of nonmelanoma skin cancer such as actinic keratosis and basal cell carcinoma. OCT has also been shown to be a valuable tool in treatment monitoring and evaluation of therapeutic success of noninvasive treatment strategies like topical immune modulators or photodynamic treatment. Other potential applications for OCT include inflammatory diseases, microbial or parasitic infestations of the skin, e.g. scabies mites or onychomycosis. In recent years high-definition OCT devices have been developed that can potentially be used for the evaluation of melanocytic lesions and, due to the higher resolution, for the visualization of intrafollicular demodex mites. Furthermore different commercially available devices offer-in addition to the cross-sectional images-a fast-generated horizontal (en face) imaging mode. With respect to resolution and penetration depth the OCT technique is taking a middle position in comparison to other noninvasive imaging devices in dermatology such as sonography and reflectance confocal microscopy. PMID:25809459

  12. Second harmonic optical coherence tomography

    CERN Document Server

    Jiang, Y; Wang, Y; Chen, Z; Jiang, Yi; Tomov, Ivan; Wang, Yimin; Chen, Zhongping

    2004-01-01

    Second harmonic optical coherence tomography, which uses coherence gating of second-order nonlinear optical response of biological tissues for imaging, is described and demonstrated. Femtosecond laser pulses were used to excite second harmonic waves from collagen harvested from rat tail tendon and a reference nonlinear crystal. Second harmonic interference fringe signals were detected and used for image construction. Because of the strong dependence of second harmonic generation on molecular and tissue structures, this technique offers contrast and resolution enhancement to conventional optical coherence tomography.

  13. Hyperspectral optical diffraction tomography

    CERN Document Server

    Jung, JaeHwang; Yoon, Jonghee; Park, YongKeun

    2015-01-01

    Here, we present a novel microscopic technique for measuring wavelength-dependent three-dimensional (3-D) distributions of the refractive indices (RIs) of microscopic samples in the visible wavelengths. Employing 3-D quantitative phase microscopy techniques with a wavelength-swept source, 3-D RI tomograms were obtained in the range of 450 - 700 nm with a spectral resolution of a few nanometers. The capability of the technique was demonstrated by measuring the hyperspectral 3-D RI tomograms of polystyrene beads, human red blood cells, and hepatocytes. The results demonstrate the potential for label-free molecular specific 3-D tomography of biological samples.

  14. Optical Coherence Tomography: Advanced Modeling

    DEFF Research Database (Denmark)

    Andersen, Peter E.; Thrane, Lars; Yura, Harold T.; Tycho, Andreas; Jørgensen, Thomas Martini

    2013-01-01

    Analytical and numerical models for describing and understanding the light propagation in samples imaged by optical coherence tomography (OCT) systems are presented. An analytical model for calculating the OCT signal based on the extended Huygens-Fresnel principle valid both for the single- and multiple-scattering regimes is derived. An advanced Monte Carlo model for calculating the OCT signal is also derived, and the validity of this model is shown through a mathematical proof based on the exte...

  15. Optical coherence tomography technology and applications

    CERN Document Server

    2008-01-01

    This book introduces optical coherence tomography, a high resolution imaging technique that enables non-invasive in vivo cross-sectional imaging of biological tissue. Covers optical and technological consderations as well biomedical and clinical perspectives.

  16. Optical Coherence Tomography for the Radiologist.

    Science.gov (United States)

    Schiffman, Jade S; Patel, Nimesh B; Cruz, Roberto Alejandro; Tang, Rosa A

    2015-08-01

    Optical coherence tomography is an imaging technique using low coherence light sources to produce high-resolution cross-sectional images. This article reviews pertinent anatomy and various pathologies causing optic atrophy (eg, compressive, infiltrating, demyelinating) versus optic nerve swelling (from increased intracranial pressure known as papilledema or other optic nerve intrinsic pathologies). On optical coherence tomography, optic atrophy is often associated with reduced average retinal nerve fiber layer thickness, whereas optic nerve swelling is usually associated with increased average retinal nerve fiber layer thickness. PMID:26208414

  17. Optical coherence tomography in dermatology

    Science.gov (United States)

    Sattler, Elke; Kästle, Raphaela; Welzel, Julia

    2013-06-01

    Optical coherence tomography (OCT) is a noninvasive diagnostic method that offers a view into the superficial layers of the skin in vivo in real-time. An infrared broadband light source allows the investigation of skin architecture and changes up to a depth of 1 to 2 mm with a resolution between 15 and 3 ?m, depending on the system used. Thus OCT enables evaluation of skin lesions, especially nonmelanoma skin cancers and inflammatory diseases, quantification of skin changes, visualization of parasitic infestations, and examination of other indications such as the investigation of nails. OCT provides a quick and useful diagnostic imaging technique for a number of clinical questions and is a valuable addition or complement to other noninvasive imaging tools such as dermoscopy, high-frequency ultrasound, and confocal laser scan microscopy.

  18. Optical Coherence Tomography: Advanced Modeling

    DEFF Research Database (Denmark)

    Andersen, Peter E.; Thrane, Lars

    2013-01-01

    Analytical and numerical models for describing and understanding the light propagation in samples imaged by optical coherence tomography (OCT) systems are presented. An analytical model for calculating the OCT signal based on the extended Huygens-Fresnel principle valid both for the single- and multiple-scattering regimes is derived. An advanced Monte Carlo model for calculating the OCT signal is also derived, and the validity of this model is shown through a mathematical proof based on the extended Huygens-Fresnel principle. From the analytical model, an algorithm for enhancing OCT images is developed, the so-called true-reflection algorithm in which the OCT signal may be corrected for the attenuation caused by scattering. The algorithm is verified experimentally and by using the Monte Carlo model as a numerical tissue phantom. Applications of extraction of optical properties from tissue are discussed. Finally, the Wigner phase-space distribution function is derived in a closed-form solution, which may have applications in OCT.

  19. High-definition optical coherence tomography

    DEFF Research Database (Denmark)

    Boone, Marc; Norrenberg, Sarah; Jemec, Gregor; Del Marmol, Véronique

    2013-01-01

    High-definition optical coherence tomography (HD-OCT) is a non-invasive technique for morphological investigation of tissue with cellular resolution filling the imaging gap between reflectance confocal microscopy and conventional optical coherence tomography. The aim of this study is first to correlate dermatopathologic descriptors of inflammatory skin conditions with epidermal alteration to features observed by HD-OCT. Secondly, to assess the discriminative accuracy of common inflammatory react...

  20. Conical wavefronts in optics and tomography

    International Nuclear Information System (INIS)

    A wide range of techniques in which the information is transferred by conical (nonspherical and nonplanar) wave fronts is considered. This is the first summary of papers published in the field of mesooptics and optical tomography. After the introduction into the new branch of modern optics - mesooptics -the properties of conical wavefronts are treated in detail. Some possible applications of mesooptics in science and technology are considered. The long history of mesooptics treated in the last chapter of this review lecture goes from the early stage of our Universe, gravitational lens, first publications in the last century and up-to-date innovations in optics, mesooptics and optical tomography. 3 refs

  1. Optical coherence tomography in late solar retinopathy

    Directory of Open Access Journals (Sweden)

    Jankovi? Aleksandar

    2011-01-01

    Full Text Available Introduction. Solar retinopathy refers to retinal injury induced by direct or indirect solar viewing. Case report. We presented a patient who had observed partial solar eclipse 51 year before. He had bilaterally decreased vision and scar of the macular region at the time of presentation. The basic diagnostic tool applied in the presented patient, optical coherence tomography, showed hyporeflexivity of the outer retina in the segment of retinal pigment epithelialphotoreceptors complex with atrophy and thinning of the foveolar region. Conclusion. Optical coherence tomography is a powerful, non-invasive diagnostic tool which can ease the diagnosis and estimate the level and nature of the macular region damage.

  2. Optical coherence tomography: Technique and applications

    DEFF Research Database (Denmark)

    Thomsen, Jakob Borup; Sander, Birgit; Mogensen, Mette; Thrane, Lars; Jørgensen, Thomas Martini; Jemec, Gregor B.E.; Andersen, Peter E.

    2009-01-01

    Optical coherence tomography (OCT) is a noninvasive optical imaging modality providing real-time video rate images in two and three dimensions of biological tissues with micrometer resolution. OCT fills the gap between ultrasound and confocal microscopy, since it has a higher resolution than ultrasound and a higher penetration than confocal microcopy. Functional extensions are also possible, i.e., flow, birefringence or spectroscopic measurements with high spatial resolution. In ophthalmology, O...

  3. Optical coherence tomography in conjunction with bronchoscopy

    Energy Technology Data Exchange (ETDEWEB)

    Rodrigues, Ascedio Jose; Takimura, Celso Kiyochi; Lemos Neto, Pedro Alves; Figueiredo, Viviane Rossi, E-mail: ascedio@gmail.com [Servico de Endoscopia Respiratoria, Hospital das Clinicas, Universidade de Sao Paulo (FM/USP), SP (Brazil)

    2012-07-01

    To evaluate the feasibility of and the potential for using optical coherence tomography in conjunction with conventional bronchoscopy in the evaluation of the airways. Methods: This was a pilot study based on an ex vivo experimental model involving three animals: one adult New Zealand rabbit and two Landrace pigs. An optical coherence tomography imaging catheter was inserted through the working channel of a flexible bronchoscope in order to reach the distal trachea of the animals. Images of the walls of the trachea were systematically taken along its entire length, from the distal to the proximal portion. Results: The imaging catheter was easily adapted to the working channel of the bronchoscope. High-resolution images of cross sections of the trachea were taken in real time, precisely delineating microstructures, such as the epithelium, submucosa, and cartilage, as well as the adventitia of the anterior and lateral tracheal walls. The corresponding layers of the epithelium, mucosa, and cartilage were clearly differentiated. The mucosa, submucosa, and trachealis muscle were clearly identified in the posterior wall. Conclusions: It is feasible to use an optical coherence tomography imaging catheter in combination with a flexible bronchoscope. Optical coherence tomography produces high resolution images that reveal the microanatomy of the trachea, including structures that are typically seen only on images produced by conventional histology. (author)

  4. Optical coherence tomography findings of quinine poisoning

    Directory of Open Access Journals (Sweden)

    John Christoforidis

    2011-01-01

    Full Text Available John Christoforidis, Robert Ricketts, Theodore Loizos, Susie ChangThe Ohio State University College of Medicine, Columbus, OH, USAPurpose: To report a case of acute quinine poisoning, document acute and chronic macular changes with optical coherence tomography imaging and fluorescein angiography (FA, and to review the literature on ocular toxicity of quinine.Methods: A 32-year-old white female presented to our Emergency Department after ingesting over 7.5 g of quinine. She underwent a complete ophthalmologic examination, fluorescein angiography, Stratus time-domain optical coherence tomography (OCT, and electroretinography at 72 hours and 15 months postingestion. Stratus time-domain and Cirrus spectral-domain OCT, fundus autofluorescence, and FA were obtained at 28 months postingestion.Results: Fluorescein angiography at 72 hours postingestion revealed normal filling times and vasculature. OCT showed marked thickening of the inner retina bilaterally. At 15 and 28 months follow-up, fundus photography and fluorescein angiography demonstrated optic nerve pallor, severely attenuated retinal vessels while OCT showed inner retinal atrophy. Fundus autofluorescence did not reveal any retinal pigmentary abnormalities.Conclusions: Quinine toxicity as seen by OCT reveals increased thickness with inner retinal hyperreflectivity acutely with development of significant retinal atrophy in the long-term. Fundus autofluorescence reveals an intact retinal pigment epithelial layer at 28 months. These findings suggest that quinine poisoning may produce a direct toxic effect on the inner retina in the acute phase resulting in long-term retinal atrophy.Keywords: retinal, optical coherence tomography, quinine toxicity 

  5. Optical tomography of the neonatal brain

    Energy Technology Data Exchange (ETDEWEB)

    Hebden, Jeremy C. [University College London, Department of Medical Physics and Bioengineering, London (United Kingdom); Austin, Topun [University College London, Department of Paediatrics and Child Health, London (United Kingdom)

    2007-11-15

    A new method of assessing neurological function and pathology in the newborn infant is being developed based on the transmission of near-infrared light across the brain. Absorption by blood over a range of wavelengths reveals a strong dependency on oxygenation status, and measurements of transmitted light enable the spatial variation in the concentrations of the oxygenated and de-oxygenated forms of hemoglobin to be derived. Optical tomography has so far provided static three-dimensional maps of blood volume and oxygenation as well as dynamic images revealing the brain's response to sensory stimulation and global hemodynamic changes. The imaging modality is being developed as a safe and non-invasive tool that can be utilized at the cotside in intensive care. Optical tomography of the healthy infant brain is also providing a means of studying neurophysiological processes during early development and the potential consequences of prematurity. (orig.)

  6. Advanced modelling of optical coherence tomography systems

    DEFF Research Database (Denmark)

    Andersen, Peter E.; Thrane, L.; Yura, H.T.; Tycho, A.; Jørgensen, T.M.; Frosz, M.H.

    2004-01-01

    Analytical and numerical models for describing and understanding the light propagation in samples imaged by optical coherence tomography (OCT) systems are presented. An analytical model for calculating the OCT signal based on the extended Huygens–Fresnel principle valid both for the single and multiple scattering regimes is reviewed. An advanced Monte Carlo model for calculating the OCT signal is also reviewed, and the validity of this model is shown through a mathematical proof based on the ext...

  7. Molecular Imaging in Optical Coherence Tomography

    OpenAIRE

    Mattison, Scott P.; Kim, Wihan; Park, Jesung; Applegate, Brian E.

    2014-01-01

    Optical coherence tomography (OCT) is a medical imaging technique that provides tomographic images at micron scales in three dimensions and high speeds. The addition of molecular contrast to the available morphological image holds great promise for extending OCT’s impact in clinical practice and beyond. Fundamental limitations prevent OCT from directly taking advantage of powerful molecular processes such as fluorescence emission and incoherent Raman scattering. A wide range of approaches is ...

  8. Near-Infrared Diffuse Optical Tomography

    OpenAIRE

    Hielscher, A. H.; Bluestone, A. Y.; G. S. Abdoulaev; A. D. Klose; J. Lasker; Stewart, M; U. Netz; J. Beuthan

    2002-01-01

    Diffuse optical tomography (DOT) is emerging as a viable new biomedical imaging modality. Using near-infrared (NIR) light, this technique probes absorption as well as scattering properties of biological tissues. First commercial instruments are now available that allow users to obtain cross-sectional and volumetric views of various body parts. Currently, the main applications are brain, breast, limb, joint, and fluorescence/bioluminescence imaging. Although the spatial resolution is limited w...

  9. Mathematical Modelling of Optical Coherence Tomography

    OpenAIRE

    Elbau, Peter; Mindrinos, Leonidas; Scherzer, Otmar

    2014-01-01

    In this chapter a general mathematical model of Optical Coherence Tomography (OCT) is presented on the basis of the electromagnetic theory. OCT produces high resolution images of the inner structure of biological tissues. Images are obtained by measuring the time delay and the intensity of the backscattered light from the sample considering also the coherence properties of light. The scattering problem is considered for a weakly scattering medium located far enough from the ...

  10. Optical coherence tomography: from research to practice

    OpenAIRE

    Gutiérrez-Chico, Juan Luis; Alegría-Barrero, Eduardo; Teijeiro-Mestre, Rodrigo; Chan, Pak Hei; Tsujioka, Hiroto; De Silva, Ranil; Viceconte, Nicola; Lindsay, Alistair; Patterson, Tiffany; Foin, Nicolas; Akasaka, Takashi; di Mario, Carlo

    2012-01-01

    Optical coherence tomography (OCT) is a high-resolution imaging technique with great versatility of applications. In cardiology, OCT has remained hitherto as a research tool for characterization of vulnerable plaques and evaluation of neointimal healing after stenting. However, OCT is now successfully applied in different clinical scenarios, and the introduction of frequency domain analysis simplified its application to the point it can be considered a potential alternative to intravascular u...

  11. Innovative experimental concepts for optical coherence tomography

    OpenAIRE

    Laubscher, Markus

    2004-01-01

    Optical Coherence Tomography (OCT) is a recent biomedical imaging technique based on low-coherence interferometry that is capable of acquiring depth-resolved reflectivity maps of scattering tissues with high sensitivity. The conventionally employed imaging mode is to build up a cross sectional image by scanning the sample surface with a point illumination. In order to increase imaging speed, the concept of parallel detection has been introduced to OCT. Here, a whole sample line or even surfac...

  12. Nanoscale optical tomography with cathodoluminescence spectroscopy

    Science.gov (United States)

    Atre, Ashwin C.; Brenny, Benjamin J. M.; Coenen, Toon; García-Etxarri, Aitzol; Polman, Albert; Dionne, Jennifer A.

    2015-05-01

    Tomography has enabled the characterization of the Earth's interior, visualization of the inner workings of the human brain, and three-dimensional reconstruction of matter at the atomic scale. However, tomographic techniques that rely on optical excitation or detection are generally limited in their resolution by diffraction. Here, we introduce a tomographic technique—cathodoluminescence spectroscopic tomography—to probe optical properties in three dimensions with nanometre-scale spatial and spectral resolution. We first obtain two-dimensional cathodoluminescence maps of a three-dimensional nanostructure at various orientations. We then use the method of filtered back-projection to reconstruct the cathodoluminescence intensity at each wavelength. The resulting tomograms allow us to locate regions of efficient cathodoluminescence in three dimensions across visible and near-infrared wavelengths, with contributions from material luminescence and radiative decay of electromagnetic eigenmodes. The experimental signal can be further correlated with the radiative local density of optical states in particular regions of the reconstruction. We demonstrate how cathodoluminescence tomography can be used to achieve nanoscale three-dimensional visualization of light-matter interactions by reconstructing a three-dimensional metal-dielectric nanoresonator.

  13. Acoustically penetrable optical reflector for photoacoustic tomography.

    Science.gov (United States)

    Deng, Zijian; Zhao, Honghong; Ren, Qiushi; Li, Changhui

    2013-07-01

    Photoacoustic tomography (PAT) detects ultrasound signals generated by the objects after absorbing illuminating photons. However, the widely used piezoelectric ultrasound transducers are generally not optically transparent, which would cause conflicts between the light illumination and the ultrasonic detection in PAT. We report a different acoustically penetrable optical reflector (APOR) concept to provide a solution to this conflict. We measured the properties of an APOR and experimentally tested its performance in a PAT system. The results demonstrated that the APOR successfully allowed the transducer to detector photoacoustic signals without affecting the light illumination. Moreover, the APOR concept can be readily implemented in various PAT systems. PMID:23839486

  14. Turbidity Measurement Using An Optical Tomography System

    OpenAIRE

    Sallehuddin Bin Ibrahim

    2013-01-01

    Turbidity is used to describe water quality and it can be caused by the presence of suspended particles and organic matter such as algae, clay and silt. The measurement of turbidity level of water is vital to domestic water supplies since it is related to public health and water treatment process. This paper presents an investigation on an optical tomography system to estimate the turbidity level in a sample of water. The optical sensors consist of infrared light-emitting diodes (LED) as tran...

  15. Endoscopic Optical Coherence Tomography for Clinical Gastroenterology

    Directory of Open Access Journals (Sweden)

    Tsung-Han Tsai

    2014-05-01

    Full Text Available Optical coherence tomography (OCT is a real-time optical imaging technique that is similar in principle to ultrasonography, but employs light instead of sound waves and allows depth-resolved images with near-microscopic resolution. Endoscopic OCT allows the evaluation of broad-field and subsurface areas and can be used ancillary to standard endoscopy, narrow band imaging, chromoendoscopy, magnification endoscopy, and confocal endomicroscopy. This review article will provide an overview of the clinical utility of endoscopic OCT in the gastrointestinal tract and of recent achievements using state-of-the-art endoscopic 3D-OCT imaging systems.

  16. Adaptive optics optical coherence tomography with dynamic retinal tracking

    OpenAIRE

    Kocaoglu, Omer P.; Ferguson, R. Daniel; Jonnal, Ravi S.; Liu, Zhuolin; Wang, Qiang; Hammer, Daniel X.; Miller, Donald T.

    2014-01-01

    Adaptive optics optical coherence tomography (AO-OCT) is a highly sensitive and noninvasive method for three dimensional imaging of the microscopic retina. Like all in vivo retinal imaging techniques, however, it suffers the effects of involuntary eye movements that occur even under normal fixation. In this study we investigated dynamic retinal tracking to measure and correct eye motion at KHz rates for AO-OCT imaging. A customized retina tracking module was integrated into the sample arm of ...

  17. Optical coherence tomography technology and applications

    CERN Document Server

    Fujimoto, James

    2015-01-01

    Optical coherence tomography (OCT) is the optical analog of ultrasound imaging and is a powerful imaging technique that enables non-invasive, in vivo, high resolution, cross-sectional imaging in biological tissue.  Between 30 to 40 Million OCT imaging procedures are performed per year in ophthalmology.  The overall market is estimated at more than 0.5 Billion USD.  A new generation OCT technology was developed, dramatically increasing resolution and speed, achieving in vivo optical biopsy, i.e. the visualization of tissue architectural morphology in situ and in real time.  Functional extensions of OCT technology enable non-invasive, depth resolved functional assessment and imaging of tissue.  The book introduces OCT technology and applications not only from an optical and technological viewpoint, but also from the biomedical and clinical perspective. This second edition is widely extended and covers significantly more topics then the first edition of this book. The chapters are written leading intern...

  18. Optical coherence tomography: the past, present and future

    OpenAIRE

    Goel, Raj K.; Kaouk, Jihad H.

    2007-01-01

    Optical coherence tomography is a new technology that provides an atraumatic “optical biopsy” providing both anatomical and possible histopathologic results. It has only recently been incorporated into the urological field. This paper highlights previous and prospective advances of optical coherence tomography in urology and its potential application in robotic urologic surgery.

  19. In vivo cellular visualization of the human retina using optical coherence tomography and adaptive optics

    Energy Technology Data Exchange (ETDEWEB)

    Olivier, S S; Jones, S M; Chen, D C; Zawadzki, R J; Choi, S S; Laut, S P; Werner, J S

    2006-01-05

    Optical coherence tomography (OCT) sees the human retina sharply with adaptive optics. In vivo cellular visualization of the human retina at micrometer-scale resolution is possible by enhancing Fourier-domain optical-coherence tomography with adaptive optics, which compensate for the eye's optical aberrations.

  20. Fiber optic based optical coherence tomography (OCT) for dental applications

    Energy Technology Data Exchange (ETDEWEB)

    Everett, M. J., LLNL

    1998-06-02

    We have developed a hand-held fiber optic based optical coherence tomography (OCT) system for scanning of the oral cavity We have produced, using this scanning device, in viva cross-sectional images of hard and soft dental tissues in human volunteers Clinically relevant anatomical structures, including the gingival margin, periodontal sulcus, and dento-enamel junction, were visible in all the images The dento-enamel junction and the alveolar bone were identifiable in approximately two thirds of the images These images represent, to our knowledge, the first in viva OCT images of human dental tissue.

  1. Optical coherence tomography velocimetry of colloidal suspensions.

    Science.gov (United States)

    Malm, A V; Harrison, A W; Waigh, T A

    2014-11-01

    Optical coherence tomography velocimetry combined with a rheometer and optical modulation techniques provides increased sensitivity to the low shear rate motion of complex fluid systems. Optical modulation coupled with a new interferometer design yields improved signal to noise ratios and is demonstrated with optically opaque colloidal suspensions. Thus the measurable range of shear velocities with complex fluids can be as low as ?40 ?m s(-1), more than an order of magnitude improvement on the previous lower limit of ?700 ?m s(-1). Furthermore the apparatus demonstrates improved sensitivity to the measurement of velocity. The instrument was used to study two hard sphere colloidal systems, sterically stabilized PVP spheres of 1 ?m radius and sterically stabilized polystyrene spheres of 600 nm radius, which display shear banding behavior due to shear induced concentration gradients. OCT velocimetry also allows the velocity fluctuations of the system to be quantified as a function of the distance across the rheometer gap to help classify underlying unsteady or turbulent phenomena. PMID:25181574

  2. Optical tomography of the aurora and EISCAT

    Directory of Open Access Journals (Sweden)

    H. U. Frey

    Full Text Available Tomographic reconstruction of the three-dimensional auroral arc emission is used to obtain vertical and horizontal distributions of the optical auroral emission. Under the given experimental conditions with a very limited angular range and a small number of observers, algebraic reconstruction methods generally yield better results than transform techniques. Different algebraic reconstruction methods are tested with an auroral arc model and the best results are obtained with an iterative least-square method adapted from emission-computed tomography. The observation geometry used during a campaign in Norway in 1995 is tested with the arc model and root-mean-square errors, to be expected under the given geometrical conditions, are calculated. Although optimum geometry was not used, root-mean-square errors of less than 2% for the images and of the order of 30% for the distribution could be obtained. The method is applied to images from real observations. The correspondence of original pictures and projections of the reconstructed volume is discussed, and emission profiles along magnetic field lines through the three-dimensionally reconstructed arc are calibrated into electron density profiles with additional EISCAT measurements. Including a background profile and the temporal changes of the electron density due to recombination, good agreement can be obtained between measured profiles and the time-sequence of calculated profiles. These profiles are used to estimate the conductivity distribution in the vicinity of the EISCAT site. While the radar can only probe the ionosphere along the radar beam, the three-dimensional tomography enables conductivity estimates in a large area around the radar site.

    Key words. Tomography · Aurora · EISCAT · Ionosphere · Conductivity

  3. Diffuse Optical Tomography for Brain Imaging: Theory

    Science.gov (United States)

    Yuan, Zhen; Jiang, Huabei

    Diffuse optical tomography (DOT) is a noninvasive, nonionizing, and inexpensive imaging technique that uses near-infrared light to probe tissue optical properties. Regional variations in oxy- and deoxy-hemoglobin concentrations as well as blood flow and oxygen consumption can be imaged by monitoring spatiotemporal variations in the absorption spectra. For brain imaging, this provides DOT unique abilities to directly measure the hemodynamic, metabolic, and neuronal responses to cells (neurons), and tissue and organ activations with high temporal resolution and good tissue penetration. DOT can be used as a stand-alone modality or can be integrated with other imaging modalities such as fMRI/MRI, PET/CT, and EEG/MEG in studying neurophysiology and pathology. This book chapter serves as an introduction to the basic theory and principles of DOT for neuroimaging. It covers the major aspects of advances in neural optical imaging including mathematics, physics, chemistry, reconstruction algorithm, instrumentation, image-guided spectroscopy, neurovascular and neurometabolic coupling, and clinical applications.

  4. Medical imaging with optical coherence tomography

    Science.gov (United States)

    Fujimoto, James G.

    2010-03-01

    Optical coherence tomography (OCT) is an emerging imaging modality which can generate high resolution, cross-sectional and three dimensional images of microstructure in biological systems. OCT is analogous to ultrasound B mode imaging, except that it uses light instead of sound. Imaging is performed by measuring the echo time delay of optical backscattering in the tissue as a function of transverse position. The penetration depth of OCT imaging is limited by attenuation from optical scattering to ˜ 2 to 3 mm in most tissues, however image resolutions of 1-10 um may be achieved. OCT functions as a type of ``optical biopsy" enabling in situ visualization of tissue microstructure with resolutions approaching that of conventional histopathology. Imaging can be performed in real time without the need to remove and process a specimen as in conventional biopsy. OCT technology utilizes advances in photonics and fiber optics such as femtosecond broadband lasers, high speed wavelength swept lasers and line scan camera technologies. Recent developments using Fourier domain detection achieve dramatic improvements in resolution and imaging speed. Three dimensional, volumetric imaging with extremely high voxel density is now possible, enabling microstructure and pathology to be visualized and rendered in a manner analogous to MR imaging. OCT is now widely accepted as a standard diagnostic in clinical ophthalmology, where it can image retinal pathology with unprecedented resolution improving the sensitivity of diagnosis and monitoring response to treatment. OCT is also being developed for other applications ranging from intravascular imaging in cardiology to endoscopic imaging for cancer detection. This presentation will discuss OCT technology and its applications.

  5. Three-Dimensional Fluorescence Optical Tomography in Small Animal Imaging using Simultaneous Positron Emission Tomography Priors

    OpenAIRE

    Li, Changqing; Wang, Guobao; Qi, Jinyi; Cherry, Simon R

    2009-01-01

    We propose three-dimensional fluorescence optical tomography (FOT) imaging for small animals guided by simultaneous priors from positron emission tomography (PET). Using a sparsity regularization, the target prior from PET images was incorporated into the reconstruction algorithm for optical imaging. The method and algorithms are validated with numerical simulations and a phantom experiment performed on a combined optical-PET scanner based on a conical mirror geometry.

  6. Advanced modelling of optical coherence tomography systems

    DEFF Research Database (Denmark)

    Andersen, Peter E.; Thrane, L.

    2004-01-01

    Analytical and numerical models for describing and understanding the light propagation in samples imaged by optical coherence tomography (OCT) systems are presented. An analytical model for calculating the OCT signal based on the extended Huygens–Fresnel principle valid both for the single and multiple scattering regimes is reviewed. An advanced Monte Carlo model for calculating the OCT signal is also reviewed, and the validity of this model is shown through a mathematical proof based on the extended Huygens–Fresnel principle. Moreover, for the first time the model is verified experimentally. From the analytical model, an algorithm for enhancing OCT images is developed; the so-called true-reflection algorithm in which the OCT signal may be corrected for the attenuation caused by scattering. For the first time, the algorithm is demonstrated by using the Monte Carlo model as a numerical tissue phantom. Such algorithm holds promise for improving OCT imagery and to extend the possibility for functional imaging.

  7. Phase-conjugate optical coherence tomography

    International Nuclear Information System (INIS)

    Quantum optical coherence tomography (Q-OCT) offers a factor-of-2 improvement in axial resolution and the advantage of even-order dispersion cancellation when it is compared to conventional OCT (C-OCT). These features have been ascribed to the nonclassical nature of the biphoton state employed in the former, as opposed to the classical state used in the latter. Phase-conjugate OCT (PC-OCT) shows that nonclassical light is not necessary to reap Q-OCT's advantages. PC-OCT uses classical-state signal and reference beams, which have a phase-sensitive cross correlation, together with phase conjugation to achieve the axial resolution and even-order dispersion cancellation of Q-OCT with a signal-to-noise ratio that can be comparable to that of C-OCT

  8. Optical coherence tomography of the rat cochlea

    Science.gov (United States)

    Wong, Brian J.; de Boer, Johannes F.; Park, Boris H.; Chen, Zhongping; Nelson, J. Stuart

    2000-10-01

    Optical coherence tomography (OCT) was used to image the internal structure of a rat cochlea (ex vivo). Immediately following sacrifice, the temporal bone of a Sprague-Dawley rat was harvested. Axial OCT cross sectional images (over regions of interest, 1 X 1 mm-2 X 8 mm) were obtained with a spatial resolution of 10 - 15 micrometers . The osseous borders of the lateral membranous labyrinth overlying the cochlea and the scala vestibuli, media, and tympani, which were well demarcated by the modiolus, Reissner's and the basilar membranes, were clearly identified. OCT can be used to image internal structures in the cochlea without violating the osseous labyrinth using simple surgical exposure of the promontory, and may potentially be used to diagnose inner ear pathology in vivo in both animal and human subjects labyrinth.

  9. Optical coherence tomography of the eye

    Science.gov (United States)

    Hee, Michael Richard

    1997-10-01

    Optical Coherence Tomography (OCT) is a new technique for high-resolution, cross-sectional imaging of tissue in which the time-of-flight delay of light reflected from internal tissue structures is resolved with high precision using interferometry. Tomographic images are obtained which are analogous to those provided by ultrasound except that image contrast relies on differences in optical rather than acoustic properties of tissue. The use of light rather than sound enables higher resolution (10 ?m) and non-contact imaging. A clinically viable high-sensitivity, fiber-optic based OCT instrument has been constructed based on engineering principles derived from optical communication theory. Computer algorithms have also been developed for quantitative image analysis and restoration. OCT has been used to image patients with a variety of ocular diseases. In patients with macular pathology, OCT images have been correlated with conventional clinical examination and fluorescein angiography. Optical coherence tomograms are effective in staging macular holes, evaluating the vitreoretinal interface in eyes at risk for a macular hole, and providing a structural assessment of macular hole surgery. In eyes with central serous chorioretinopathy, OCT can evaluate sensory retinal separations undetected at the slit-lamp. Serial OCT images of macular edema are able to track both the progression of macular thickening and the resolution of macular edema following laser photocoagulation. In patients with diabetic retinopathy, measurements of macular thickness correlate with visual acuity and OCT is more sensitive to small changes in retinal thickness than slit-lamp biomicroscopy. OCT may provide a novel method of defining occult choroidal neovascular membranes in patients with age-related macular degeneration. OCT can also profile the thickness of the retinal nerve fiber layer with high resolution which is potentially important for the objective assessment of early glaucoma progression. OCT images have been correlated with visual field performance and optic nerve appearance in a cross- section of patients with various stages of glaucoma. These studies suggest that OCT has the potential to become an important diagnostic tool for the practicing ophthalmologist. (Copies available exclusively from MIT Libraries, Rm. 14-0551, Cambridge, MA 02139-4307. Ph. 617-253-5668; Fax 617-253-1690.)

  10. Three-Dimensional Optical Coherence Tomography (3D OCT) Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Applied Science Innovations, Inc. proposes to develop a new tool of 3D optical coherence tomography (OCT) for cellular level imaging at video frame rates and...

  11. Three-Dimensional Optical Coherence Tomography (3D OCT) Project

    Data.gov (United States)

    National Aeronautics and Space Administration — Applied Science Innovations, Inc. proposes a new tool of 3D optical coherence tomography (OCT) for cellular level imaging at video frame rates and dramatically...

  12. High-definition optical coherence tomography imaging of melanocytic lesions

    DEFF Research Database (Denmark)

    Boone, Marc A L M; Norrenberg, Sarah; Jemec, Gregor B E; Del Marmol, V

    2014-01-01

    High-definition optical coherence tomography (HD-OCT) is a non-invasive in vivo imaging technique with cellular resolution based on the principle of conventional optical coherence tomography. The objective of this study was to evaluate HD-OCT for its ability to identify architectural patterns and cytologic features of melanocytic lesions. All lesions were examined by one observer clinically and using dermoscopy. Cross-sectional HD-OCT images were compared with histopathology. En face HD-OCT imag...

  13. Experimental Demonstration of Spectral Intensity Optical Coherence Tomography

    OpenAIRE

    Ryczkowski, Piotr; Turunen, Jari; Friberg, Ari T.; Genty, Goëry

    2015-01-01

    We demonstrate experimentally quantum-inspired, spectral-domain intensity optical coherence tomography. We show that the technique allows for both axial resolution improvement and dispersion cancellation compared to conventional optical coherence tomography. The method does not involve scanning and it works with classical light sources and standard photodetectors. The measurements are in excellent agreement with the theoretical predictions. We also propose an approach that e...

  14. Optical clearing of unsectioned specimens for three-dimensional imaging via optical transmission and emission tomography

    OpenAIRE

    Oldham, Mark; Sakhalkar, Harshad; OLIVER, Tim; Johnson, G Allan; Dewhirst, Mark

    2008-01-01

    Optical computed tomography (optical-CT) and optical emission computed tomography (optical-ECT) are new techniques that enable unprecedented high-resolution 3-D multimodal imaging of tissue structure and function. Applications include imaging macroscopic gene expression and microvasculature structure in unsectioned biological specimens up to 8 cm3. A key requisite for these imaging techniques is effective sample preparation including optical clearing, which enables light transport through the...

  15. Optical coherence tomography in diagnosing cervical cancer

    Science.gov (United States)

    Kuznetzova, Irina A.; Shakhova, Natalia M.; Kachalina, Tatiana S.; Gladkova, Natalia D.; Myakov, Alexey V.; Iksanov, Rashid R.; Feldchtein, Felix I.

    2000-05-01

    Cervical cancer remains one of the most significant problem in oncogynecology. It tends towards treatment approaches that provide termination of pathological processes along with preservation of the patient's life quality. There is a need in earlier and more accurate diagnosis of pathological states, objective assessment of physiological processes, and adequate monitoring of the course of treatment. In our previous publications we have reported unique capabilities of the Optical Coherence Tomography (OCT) to image in vivo the mucosa structure of the cervix and to monitor various physiological and pathological alterations. In this report, we present results of OCT application to diagnose different stages of cervical cancer and to control its treatment at early stages. We have performed OCT-colposcopy in 11 female patients with cervical cancer to derive OCT criteria of this disease, to provide exact demarcation of a pathological area, and to determine a real size of a tumor. We have found that, in general, borders of a tumor, defined visually and detected with OCT by violation of the basement membrane in exocervix, do not coincide. The mismatch depends on a stage of cancer and can be as much as several millimeters. This information is especially important for evaluation of linear dimension of tumors with 3 - 5 mm invasion and also for differential diagnosis between the T1 and T2 stages with cancer extension onto vagina.

  16. Polarization sensitive optical coherence tomography detection method

    Energy Technology Data Exchange (ETDEWEB)

    Everett, M J; Sathyam, U S; Colston, B W; DaSilva, L B; Fried, D; Ragadio, J N; Featherstone, J D B

    1999-05-12

    This study demonstrates the potential of polarization sensitive optical coherence tomography (PS-OCT) for non-invasive in vivo detection and characterization of early, incipient caries lesions. PS-OCT generates cross-sectional images of biological tissue while measuring the effect of the tissue on the polarization state of incident light. Clear discrimination between regions of normal and demineralized enamel is first shown in PS-OCT images of bovine enamel blocks containing well-characterized artificial lesions. High-resolution, cross-sectional images of extracted human teeth are then generated that clearly discriminate between the normal and carious regions on both the smooth and occlusal surfaces. Regions of the teeth that appeared to be demineralized in the PS-OCT images were verified using histological thin sections examined under polarized light microscopy. The PS-OCT system discriminates between normal and carious regions by measuring the polarization state of the back-scattered 1310 nm light, which is affected by the state of demineralization of the enamel. Demineralization of enamel increases the scattereing coefficient, thus depolarizing the incident light. This study shows that PS-OCT has great potential for the detection, characterization, and monitoring of incipient caries lesions.

  17. VW Hyi: optical spectroscopy and Doppler tomography

    CERN Document Server

    Smith, A J; Hynes, R I; Smith, Amanda J.; Haswell, Carole A.; Hynes, Robert I.

    2006-01-01

    We present high quality optical spectroscopy of the SU UMa-subtype dwarf nova, VW Hyi taken while the system was in quiescence. An S-wave is executed by the emission cores of the Hydrogen Balmer lines and by the emission lines of He I, Ca II, Fe II and He II. Using Doppler tomography we show it originates in the accretion stream-disc impact region. The He II emission is strongly phase-dependent, suggesting it originates exclusively within a hot cavity at the initial impact. We map the ionization structure of the stream-disc interaction region. One possible interpretation of this is that the Balmer hotspot lies downstream of the He II hotspot in the outer accretion disc, with the He I and Ca II hotspots at intermediate locations between the two. This suggests that Balmer emission is suppressed until material has cooled somewhat downstream of the impact site and is able to recombine. We favour a phase offset of 0.15+/-0.04 between the photometric ephemeris and inferior conjunction of the mass donor. The white d...

  18. Imaging Retinal Capillaries Using Ultrahigh-Resolution Optical Coherence Tomography and Adaptive Optics

    OpenAIRE

    Wang, Qiang; Kocaoglu, Omer P.; Cense, Barry; Bruestle, Jeremy; Jonnal, Ravi S.; Gao, Weihua; Miller, Donald T.

    2011-01-01

    Ultrahigh-resolution optical coherence tomography with adaptive optics provides micrometer-scale 3D resolution that is attractive for imaging the retinal microvasculature. The potential for detecting retinal capillaries in healthy subjects using this methodology is investigated.

  19. Coherent noise remover for optical projection tomography

    Science.gov (United States)

    Shi, Liangliang; Dong, Di; Yang, Yujie; Wang, Jun; Arranz, Alicia; Ripoll, Jorge; Tian, Jie

    2015-03-01

    Optical Projection Tomography (OPT) is a 3-Dimentional (3D) imaging technique for small specimens between 1mm and 10mm in size. Due to its high resolution and whole-body imaging ability, OPT has been widely used for imaging of small specimens such as murine embryos, murine organs, zebra fish, and plant sections. During an OPT imaging experiment, the ring artifacts are very common which severely impact the image quality of OPT. A ring artifact is caused by a bad pixel on the camera, or impurities on surface of lens and index matching vessel. Here we term these noises as coherent noise because they stay in the same image region during an OPT experiment. Currently, there is still no effective method to remove coherent noises. To address this problem, we propose a novel method to suppress the coherent noises before 3D OPT reconstruction. Our method consists of two steps: 1) find bad pixel positions on a blank image without specimen by using threshold segmentation, then fix the bad pixels on the projection image by using average of their neighbor pixels, 2) remove remained coherent noises on the sinogram by using Variational Coherent noise Remover (VSNR) method. After the two steps, lots of method can be used to generate the tomographic slices from the modified sinograms. We apply our method to a mouse heart imaging with our home-made OPT system. The experimental results show that our method has a good suppression on coherent noise and greatly improves the image quality. The innovation of our method is that we remove coherent noise automatically from both projection image and sinogram and they complement each other.

  20. Quantum optical coherence tomography of a biological sample

    CERN Document Server

    Nasr, Magued B; Nguyen, Nam; Rong, Guoxin; Yang, Linglu; Reinhard, Bjorn M; Saleh, Bahaa E A; Teich, Malvin C

    2008-01-01

    Quantum optical coherence tomography (QOCT) makes use of an entangled-photon light source to carry out dispersion-immune axial optical sectioning. We present the first experimental QOCT images of a biological sample: an onion-skin tissue coated with gold nanoparticles. 3D images are presented in the form of 2D sections of different orientations.

  1. A comprehensive method for optical-emission computed tomography

    OpenAIRE

    Thomas, Andrew; Bowsher, James; Roper, Justin; Oliver, Tim; Dewhirst, Mark; Oldham, Mark

    2010-01-01

    Optical-computed tomography (CT) and optical-emission computed tomography (ECT) are recent techniques with potential for high-resolution multi-faceted 3D imaging of the structure and function in unsectioned tissue samples up to 1–4 cc. Quantitative imaging of 3D fluorophore distribution (e.g. GFP) using optical-ECT is challenging due to attenuation present within the sample. Uncorrected reconstructed images appear hotter near the edges than at the center. A similar effect is seen in SPECT/PET...

  2. Optimisation of post mortem cardiac computed tomography compared to optical coherence tomography and histopathology - Technical note

    DEFF Research Database (Denmark)

    Precht, Helle; Leth, Peter Mygind; Thygesen, Jesper; Hardt-Madsen, Michael; Nielsen, Bjarne; Falk, Erling; Egstrup, Kenneth; Gerke, Oke; Broersen, Alexander; Kitslaar, Pieter H.; Dijkstra, Jouke; Lambrechtsen, Jess

    2014-01-01

    Introduction: Coronary atherosclerosis is a leading cause of mortality. New technological developments in computed tomography (CT), including dual energy, iterative reconstructions and high definition scanning, could significantly improve the non-invasive identification of atherosclerosis plaques. Here, a new method for optimising cardiac coronary CT with optical coherence tomography (OCT) and histopathology is presented. Materials and methods: Twenty human hearts obtained from autopsies were us...

  3. Functional swept source optical coherence tomography

    International Nuclear Information System (INIS)

    Optical coherence tomography (OCT) is a non-invasive imaging modality capable of providing information about a sample structure along the three spatial dimensions with micrometer scale resolution. A new chapter opened with the development of functional OCT that provides additional information to the standard structural imaging. Among those extensions is Doppler OCT (D-OCT) that yields knowledge about the motion of the sample and/or its substructure. Its main application in biomedical imaging is the assessment of blood flow. D-OCT is therefore often associated with blood velocity measurement and recently with the visualization of the vascular network. Blood flow and vasculature are important markers of tissue health. Their assessment provides crucial information for diagnostics, treatment planning and monitoring. OCT is in a good position, as a non-invasive technique, to become an alternative to current fluorescence based techniques, allowing thereby also more frequent examination and broader screenings and, as a high resolution modality, to give insight into potential changes at the capillary level. An important challenge of in vivo imaging is patient motion that decreases the quality of acquisitions. One solution to that issue is high-speed imaging. Recently swept source OCT (SSOCT) revealed to be an efficient technology to achieve high-speed. This thesis investigates the use of swept sources for qualitative and quantitative vasculature imaging. It is presented via five journal papers that form its backbone. Prior to that, main concepts of FDOCT, D-OCT and SS systems are presented. The first paper reports a SSOCT system for skin imaging. In standard OCT systems, improving the lateral resolution comes at a cost of reduced depth of focus. This should be avoided in order to be able to assess different vascular beds in depth while keeping the speed advantage of FDOCT. Employing a Bessel beam for illumination of the sample allows circumventing this issue. The image quality of that configuration is compared to that of a standard system. Also, the further advantages of Bessel illumination, such as beam self-regeneration and dark-field imaging are demonstrated. The second paper demonstrates clinically relevant applications in dermatology. The system and the post-processing algorithms are applied to healthy and pathological skin, thereby exhibiting the potential of the system for clinical application. We demonstrate with selected examples that disease, including non-melanoma skin cancer, affects the vasculature network and its perfusion. It confirms the relevancy of providing additional functional information to the standard structure. The third paper applies similar post-processing to imaging of the posterior pole vasculature. This work demonstrates the need for speed in in vivo imaging and paves the way to future clinical procedures. Ultrahigh-speed allows imaging over a large field of view in a few seconds, hence, bypassing the need for volume stitching. Dedicated post-processing permits depth resolved visualization from large vessels to capillaries non-invasively. The fourth paper switches the topic to quantitative blood flow assessment by the introduction of a system allowing for stable blood flow velocity measurements. Employing two beams measuring the same location along different directions provides accurate velocity measurements. Still, this fixed optical illumination becomes unstable if the vessel is perpendicular to the illumination plane subtended by both directions. The publication suggests utilizing a Dove prism to rotate the illumination plane and thereby improving the flexibility of that configuration. Finally, the last paper proposes a method to optically resolve a photoacoustic signal with a SSOCT system. A combination of photoacoustics with OCT would provide complementary spectroscopic or metabolic information about the sample and would ultimately improve knowledge about tissue health.(author)

  4. Polarization-Sensitive Quantum Optical Coherence Tomography: Experiment

    OpenAIRE

    Booth, Mark C.; Saleh, Bahaa E. A.; Teich, Malvin Carl

    2010-01-01

    Polarization-sensitive quantum optical coherence tomography (PS-QOCT) makes use of a Type-II twin-photon light source for carrying out optical sectioning with polarization sensitivity. A BBO nonlinear optical crystal pumped by a Ti:sapphire psec-pulsed laser is used to confirm the theoretical underpinnings of this imaging paradigm. PS-QOCT offers even-order dispersion cancellation with simultaneous access to the group-velocity dispersion characteristics of the interstitial m...

  5. Imaging of collagen deposition disorders using optical coherence tomography

    DEFF Research Database (Denmark)

    Ring, H C; Mogensen, Mette; Arif Hussain, A; Steadman, N; Banzhaf, C; Themstrup, L; Jemec, G B

    2015-01-01

    BACKGROUND: Collagen deposition disorders such as hypertrophic scars, keloids and scleroderma can be associated with significant stigma and embarrassment. These disorders often constitute considerable impairment to quality of life, with treatment posing to be a substantial challenge. Optical coherence tomography (OCT) provides a non-invasive, easily applicable bedside optical imaging method for assessment of the skin. It is hypothesized that OCT imaging may be useful in assessing fibrosis to avo...

  6. Cryosurgery treatment of actinic keratoses monitored by optical coherence tomography

    DEFF Research Database (Denmark)

    Themstrup, L.; Banzhaf, C.; Jemec, G.B.E.; Mogensen, M.

    2013-01-01

    Background: Optical coherence tomography (OCT) is a non-invasive optical imaging technique providing high-resolution images. OCT may be useful as a monitoring tool during treatment of actinic keratoses (AK) and skin cancer. Objective: To examine and describe how OCT skin morphology changes when the tissue is exposed to the effects of cryotherapy. Methods: Normal ex vivo skin and in vivo AK lesions were examined. Cryotherapy was applied and OCT images were acquired at defined time points. OCT mor...

  7. Artery phantoms for intravascular optical coherence tomography: healthy arteries

    OpenAIRE

    Bisaillon, Charles-Étienne; Dufour, Marc L.; Lamouche, Guy

    2011-01-01

    We present a method to make phantoms of coronary arteries for intravascular optical coherence tomography (IV-OCT). The phantoms provide a calibrated OCT response similar to the layered structure of arteries. The optical properties of each layer are achieved with specific concentrations of alumina and carbon black in a silicone matrix. This composition insures high durability and also approximates the elastic properties of arteries. The phantoms are fabricated in a tubular shape by the success...

  8. Superresolution and Corrections to the Diffusion Approximation in Optical Tomography

    OpenAIRE

    Panasyuk, George Y.; Markel, Vadim A; Schotland, John C.

    2005-01-01

    We demonstrate that the spatial resolution of images in optical tomography is not limited to the fundamental length scale of one transport mean free path. This result is facilitated by the introduction of novel corrections to the standard integral equations of scattering theory within the diffusion approximation to the radiative transport equation.

  9. Improving spatial resolution and contrast in ultrasound modulated optical tomography

    Science.gov (United States)

    Huynh, N. T.; Ruan, H.; Mather, M. L.; Hayes-Gill, B. R.; Morgan, S. P.

    2012-02-01

    Ultrasound imaging has benefited from non-linear approaches to improve image resolution and reduce the effects of side-lobes. A system for performing second harmonic ultrasound modulated optical tomography is demonstrated which incorporates both pulsed optical illumination and acoustic excitation. A pulse acoustic inversion scheme is employed which allows the second harmonic ultrasound modulated optical signal to be obtained while still maintaining a short pulse length of the acoustic excitation. For the experiments carried out the method demonstrates a reduction in the effective line spread function from 4mm for the fundamental to 2.4mm for the second harmonic. The first use of pulsed ultrasound modulated optical tomography in imaging fluorescent targets is also discussed. Simple experiments show that by changing the length of the acoustic pulse the image contrast can be optimized. The modulation depth of the detected signal is greatest when the length of the object along the acoustic axis is an odd number of half wavelengths and is weakest when the object is an integer multiple of an acoustic wavelength. Preliminary ultrasound modulated imaging results are also presented where the target generates light within the medium without the use of an external light source. Although signal to noise ratio is likely to be a major challenge, this result highlights a potentially useful application of ultrasound modulated optical tomography in bio- or chemi-luminescence imaging.

  10. Imaging of dental implant osseointegration using optical coherent tomography

    Science.gov (United States)

    Ionita, I.; Reisen, P.

    2009-02-01

    Investigation of initial implant stability with different dental implant designs is an important task to obtain good quality dental implants. Failure of a dental implant is often related to failure to osseointegrate correctly. Optical Coherent Tomography is a competitive non-invasive method of osseointegration investigation. FD-OCT with Swept Source was used to obtain 3-D image of the peri-implant tissue (soft and hard) in the case of mandible fixed screw. 1350 nm centered laser source give better images than 850 nm laser source for hard tissue imaging. Present work suggests that Optical Coherent Tomography is a proper technique to obtain the image of the contact tissue-metal screw. OCT images are useful to evaluate optical properties of bone tissues.

  11. Optical Coherence Tomography to Assess Neurodegeneration in Multiple Sclerosis.

    Science.gov (United States)

    Petzold, Axel

    2016-01-01

    Retinal spectral domain optical coherence tomography (OCT) has emerged as a clinical and research tool in multiple sclerosis (MS) and optic neuritis (ON). This chapter summarizes a short OCT protocol as included in international consensus guidelines. The protocol was written for hands-on style such that both clinicians and OCT technicians can make use of it. The protocol is suitable for imaging of the optic nerve head and macular regions as a baseline for follow-up investigations, individual layer segmentation, and diagnostic assessment. PMID:25476442

  12. Polarization-Sensitive Quantum Optical Coherence Tomography: Experiment

    CERN Document Server

    Booth, Mark C; Teich, Malvin Carl

    2010-01-01

    Polarization-sensitive quantum optical coherence tomography (PS-QOCT) makes use of a Type-II twin-photon light source for carrying out optical sectioning with polarization sensitivity. A BBO nonlinear optical crystal pumped by a Ti:sapphire psec-pulsed laser is used to confirm the theoretical underpinnings of this imaging paradigm. PS-QOCT offers even-order dispersion cancellation with simultaneous access to the group-velocity dispersion characteristics of the interstitial medium between the reflecting surfaces of the sample.

  13. Protein-based molecular contrast optical coherence tomography

    Science.gov (United States)

    Yang, Changhuei; Choma, Michael A.; Lamb, Laura E.; Simon, John D.; Izatt, Joseph A.

    2004-07-01

    We describe a novel technique for contrast enhancement in optical coherence tomography (OCT) which uses optically switchable protein based chromophores. Photosensitive proteins, such as bacteriorhodopsin and phytochrome, are promising OCT molecular contrast agents by reason of their remarkably low transition activation intensities compatible with in vivo imaging, and their potential for use as genetically expressible markers for molecular imaging. This study details the use of a novel optical switch suppression scheme which uses the absorption change between the two state groups of phytochrome to extract concentration and distribution information of the contrast agent within a target sample.

  14. Wavelength-encoded tomography based on optical temporal Fourier transform

    Energy Technology Data Exchange (ETDEWEB)

    Zhang, Chi; Wong, Kenneth K. Y., E-mail: kywong@eee.hku.hk [Photonic Systems Research Laboratory, Department of Electrical and Electronic Engineering, The University of Hong Kong, Pokfulam Road (Hong Kong)

    2014-09-01

    We propose and demonstrate a technique called wavelength-encoded tomography (WET) for non-invasive optical cross-sectional imaging, particularly beneficial in biological system. The WET utilizes time-lens to perform the optical Fourier transform, and the time-to-wavelength conversion generates a wavelength-encoded image of optical scattering from internal microstructures, analogous to the interferometery-based imaging such as optical coherence tomography. Optical Fourier transform, in principle, comes with twice as good axial resolution over the electrical Fourier transform, and will greatly simplify the digital signal processing after the data acquisition. As a proof-of-principle demonstration, a 150?-?m (ideally 36??m) resolution is achieved based on a 7.5-nm bandwidth swept-pump, using a conventional optical spectrum analyzer. This approach can potentially achieve up to 100-MHz or even higher frame rate with some proven ultrafast spectrum analyzer. We believe that this technique is innovative towards the next-generation ultrafast optical tomographic imaging application.

  15. Wavelength-encoded tomography based on optical temporal Fourier transform

    International Nuclear Information System (INIS)

    We propose and demonstrate a technique called wavelength-encoded tomography (WET) for non-invasive optical cross-sectional imaging, particularly beneficial in biological system. The WET utilizes time-lens to perform the optical Fourier transform, and the time-to-wavelength conversion generates a wavelength-encoded image of optical scattering from internal microstructures, analogous to the interferometery-based imaging such as optical coherence tomography. Optical Fourier transform, in principle, comes with twice as good axial resolution over the electrical Fourier transform, and will greatly simplify the digital signal processing after the data acquisition. As a proof-of-principle demonstration, a 150?-?m (ideally 36??m) resolution is achieved based on a 7.5-nm bandwidth swept-pump, using a conventional optical spectrum analyzer. This approach can potentially achieve up to 100-MHz or even higher frame rate with some proven ultrafast spectrum analyzer. We believe that this technique is innovative towards the next-generation ultrafast optical tomographic imaging application.

  16. Optical computed tomography liquid calibration phantom

    Science.gov (United States)

    Jordan, K.

    2013-06-01

    Fluorinated ethylene propylene tubing is investigated as a method of preparing a contrast-resolution phantom for quantitative characterization of optical CT scanners and hydrogel dosimeters. Two sizes of tubing were examined: 6 and 13 mm inner diameter with 0.75 and 0.5 mm wall thicknesses, respectively. Water solutions of carbon black, nanoparticles in micelles provided continuously adjustable absorption contrast. Cross-sectional slices from two phantoms scanned with two different optical CT scanners are presented. Reconstructions from these simple phantoms can be used to identify scanner artefacts and improve instrument design. These phantoms represent a more reproducible approach than casting "gel fingers" into gel phantoms for system characterization. The thinner walled tubes have fewer optical artefacts.

  17. Optical computed tomography liquid calibration phantom

    International Nuclear Information System (INIS)

    Fluorinated ethylene propylene tubing is investigated as a method of preparing a contrast-resolution phantom for quantitative characterization of optical CT scanners and hydrogel dosimeters. Two sizes of tubing were examined: 6 and 13 mm inner diameter with 0.75 and 0.5 mm wall thicknesses, respectively. Water solutions of carbon black, nanoparticles in micelles provided continuously adjustable absorption contrast. Cross-sectional slices from two phantoms scanned with two different optical CT scanners are presented. Reconstructions from these simple phantoms can be used to identify scanner artefacts and improve instrument design. These phantoms represent a more reproducible approach than casting ''gel fingers'' into gel phantoms for system characterization. The thinner walled tubes have fewer optical artefacts.

  18. Photoacoustic tomography guided diffuse optical tomography for small-animal model

    Science.gov (United States)

    Wang, Yihan; Gao, Feng; Wan, Wenbo; Zhang, Yan; Li, Jiao

    2015-03-01

    Diffuse optical tomography (DOT) is a biomedical imaging technology for noninvasive visualization of spatial variation about the optical properties of tissue, which can be applied to in vivo small-animal disease model. However, traditional DOT suffers low spatial resolution due to tissue scattering. To overcome this intrinsic shortcoming, multi-modal approaches that incorporate DOT with other imaging techniques have been intensively investigated, where a priori information provided by the other modalities is normally used to reasonably regularize the inverse problem of DOT. Nevertheless, these approaches usually consider the anatomical structure, which is different from the optical structure. Photoacoustic tomography (PAT) is an emerging imaging modality that is particularly useful for visualizing lightabsorbing structures embedded in soft tissue with higher spatial resolution compared with pure optical imaging. Thus, we present a PAT-guided DOT approach, to obtain the location a priori information of optical structure provided by PAT first, and then guide DOT to reconstruct the optical parameters quantitatively. The results of reconstruction of phantom experiments demonstrate that both quantification and spatial resolution of DOT could be highly improved by the regularization of feasible-region information provided by PAT.

  19. Trends in optical coherence tomography applied to medical imaging

    Science.gov (United States)

    Podoleanu, Adrian G.

    2014-01-01

    The number of publications on optical coherence tomography (OCT) continues to double every three years. Traditionally applied to imaging the eye, OCT is now being extended to fields outside ophthalmology and optometry. Widening its applicability, progress in the core engine of the technology, and impact on development of novel optical sources, make OCT a very active and rapidly evolving field. Trends in the developments of different specific devices, such as optical sources, optical configurations and signal processing will be presented. Encompassing studies on both the configurations as well as on signal processing themes, current research in Kent looks at combining spectral domain with time domain imaging for long axial range and simultaneous imaging at several depths. Results of the collaborative work of the Applied Optics Group in Kent with organisers of this conference will be presented, with reference to 3D monitoring of abfraction.

  20. Tomography

    International Nuclear Information System (INIS)

    Apparatus is described for generating a two-dimensional back-projected image of a slice of an object in tomography. The apparatus uses optical techniques to perform the functions of filtering and back projection. Central to the technique is a cylindrical drum which rotates at a fast rate and whose rotational axis tilts at a slower rate. The novel method overcomes the problem of image blurring due to motion which occurs in many tomographic techniques. It also has the advantages of being less expensive and simpler compared to tomography using digital processing techniques which require fast computers. (UK)

  1. Computational adaptive optics for broadband optical interferometric tomography of biological tissue

    Science.gov (United States)

    Boppart, Stephen A.

    2015-03-01

    High-resolution real-time tomography of biological tissues is important for many areas of biological investigations and medical applications. Cellular level optical tomography, however, has been challenging because of the compromise between transverse imaging resolution and depth-of-field, the system and sample aberrations that may be present, and the low imaging sensitivity deep in scattering tissues. The use of computed optical imaging techniques has the potential to address several of these long-standing limitations and challenges. Two related techniques are interferometric synthetic aperture microscopy (ISAM) and computational adaptive optics (CAO). Through three-dimensional Fourierdomain resampling, in combination with high-speed OCT, ISAM can be used to achieve high-resolution in vivo tomography with enhanced depth sensitivity over a depth-of-field extended by more than an order-of-magnitude, in realtime. Subsequently, aberration correction with CAO can be performed in a tomogram, rather than to the optical beam of a broadband optical interferometry system. Based on principles of Fourier optics, aberration correction with CAO is performed on a virtual pupil using Zernike polynomials, offering the potential to augment or even replace the more complicated and expensive adaptive optics hardware with algorithms implemented on a standard desktop computer. Interferometric tomographic reconstructions are characterized with tissue phantoms containing sub-resolution scattering particles, and in both ex vivo and in vivo biological tissue. This review will collectively establish the foundation for high-speed volumetric cellular-level optical interferometric tomography in living tissues.

  2. Optical tomography of the aurora and EISCAT

    OpenAIRE

    H. U. Frey; Frey, S.; Lanchester, B. S.; Kosch, M.

    1998-01-01

    Tomographic reconstruction of the three-dimensional auroral arc emission is used to obtain vertical and horizontal distributions of the optical auroral emission. Under the given experimental conditions with a very limited angular range and a small number of observers, algebraic reconstruction methods generally yield better results than transform techniques. Different algebraic reconstruction methods are tested with an auroral arc model and the best results are obtained with an iterative least...

  3. Multifocal Cysticercosis with Optical Coherence Tomography Findings in a Child

    OpenAIRE

    Agarwal, Manisha; Jha, Vivek; Chaudhary, Somendra P.; Singh, Ashok K.

    2012-01-01

    We herein report a case with multifocal cysticercosis – sub-conjunctival cysticercus cyst, sub-retinal cysticercosis, and neurocysticercosis in a child. The optical coherence tomography (OCT) findings of the sub-retinal cysticercus cyst are reported. He was treated with anti-helminthic drugs and oral prednisolone followed by surgical removal of the sub-retinal cyst. He subsequently underwent silicone oil removal with lens aspiration and intraocular lens implantation maintaining stable vision

  4. Clustered targets imaged by optical tomography guided by ultrasound

    OpenAIRE

    Xu, Yan; Xu, Chen; Zhu, Quing

    2011-01-01

    Clustered small breast lesions may be present in the neighboring areas and are difficult to accurately resolve and quantify in diffuse optical tomography. In addition, larger cancers are often accompanied by clustered satellite lesions in the neighboring areas, which are also difficult to resolve and quantify. To improve the light quantification of clustered lesions, a new multi-zone reconstruction algorithm guided by co-registered ultrasound (US) was investigated using simulations, phantoms,...

  5. Retinal and choroidal intravascular spectral-domain optical coherence tomography

    DEFF Research Database (Denmark)

    Willerslev, Anne; Li, Xiao Qiang; Cordtz, Peter; Munch, Inger C; Larsen, Michael

    2014-01-01

    Purpose:? To examine retinal and choroidal blood vessels using spectral-domain optical coherence tomography (SD-OCT). Methods:? Retrospective case series. Results:? Scans through retinal blood vessels in healthy subjects demonstrated vessel wall reflexes and a tri-layer profile of the blood column on longitudinal scans and a figure-of-eight configuration on cross-sectional scans. Intravascular reflectivity decreased with increasingly oblique angles of observation and was absent when blood flow w...

  6. Modeling light–tissue interaction in optical coherence tomography systems

    DEFF Research Database (Denmark)

    Andersen, Peter E.; Jørgensen, Thomas Martini; Thrane, Lars; Tycho, Andreas; Yura, Harold T.

    2015-01-01

    Optical coherence tomography (OCT) performs high-resolution, cross-sectional tomographic imaging of the internal tissue microstructure by measuring backscattered or backreflected light. The scope of this chapter is to present analytical and numerical models that are able to describe light-tissue interactions and its influence on the performance of OCT systems including multiple scattering effects in heterogeneous media. In general, these models, analytical as well as numerical, may serve as impo...

  7. Imaging cutaneous T-Cell lymphoma with optical coherence tomography

    DEFF Research Database (Denmark)

    Ring, H.C.; Hansen Stamp, I.M.; Jemec, G.B.E.

    2012-01-01

    Aim: To investigate the presentation of a patch-stage cutaneous T-cell lymphoma (CTCL) using optical coherence tomography (OCT). Methods: A patient with a patch caused by CTCL was photographed digitally, OCT-scanned and biopsied. A normal skin area adjacent to the patch was OCT-scanned for comparison, but not biopsied. The OCT image and the histological image were compared. Results: The OCT images illustrated a thickened and hyperreflective stratum corneum. OCT also demonstrated several elongate...

  8. Spectralis optical coherence tomography findings in Welder's maculopathy

    OpenAIRE

    Mahindrakar, Aniruddha; Toshniwal, Svetlana; Doongerwala, M I; Anthony, Hansel

    2013-01-01

    Welder's maculopathy is a form of photochemical damage to the retina and is typically characterized by involvement of the outer retinal layers. Spectral domain optical coherence tomography (SD-OCT) imaging was performed in three eyes of two patients with clinical findings suggestive of Welder's maculopathy in occupational welders. A faceted foveal lesion characterized clinical examination and the SD-OCT line scans images showed a distinct discontinuity of the photoreceptor inner and outer seg...

  9. Clinical Applications of Anterior Segment Optical Coherence Tomography

    OpenAIRE

    Lim, Su-Ho

    2015-01-01

    Anterior segment optical coherence tomography (AS-OCT) was recently developed and has become a crucial tool in clinical practice. AS-OCT is a noncontact imaging device that provides the detailed structure of the anterior part of the eyes. In this review, the author will discuss the various clinical applications of AS-OCT, such as the normal findings, tear meniscus measurement, ocular surface disease (e.g., pterygium, pinguecula, and scleromalacia), architectural analysis after cataract surger...

  10. Single camera based spectral domain polarization sensitive optical coherence tomography

    OpenAIRE

    Baumann, Bernhard; Götzinger, Erich; Pircher, Michael; Hitzenberger, Christoph K.

    2007-01-01

    We developed a new spectral domain polarization sensitive optical coherence tomography (SD PS-OCT) system that requires only a single spectrometer CCD camera. The spectra of the horizontal and vertical polarization channels are imaged adjacent to each other on a 2048 pixel line scan camera, using 1024 pixels for each channel. Advantages of the system are reduced costs and complexity, lower demands on timing and triggering circuitry, and higher robustness against camera misalignments. We discu...

  11. Real-time compressive sensing spectral domain optical coherence tomography

    OpenAIRE

    Xu, Daguang; Yong HUANG; Kang, Jin U

    2014-01-01

    We developed and demonstrated real-time compressive sensing (CS) spectral domain optical coherence tomography (SD OCT) B-mode imaging at excess of 70 fps. The system was implemented using a conventional desktop computer architecture having three graphics processing units (GPUs). This result shows speed gain of 459 and 112 times compared to best CS implementations based on the MATLAB and C++ respectively and that real-time CS-SDOCT imaging can finally be realized.

  12. Real-time compressive sensing spectral domain optical coherence tomography.

    Science.gov (United States)

    Xu, Daguang; Huang, Yong; Kang, Jin U

    2014-01-01

    We developed and demonstrated real-time compressive sensing (CS) spectral domain optical coherence tomography (SD-OCT) B-mode imaging at excess of 70 fps. The system was implemented using a conventional desktop computer architecture having three graphics processing units. This result shows speed gain of 459 and 112 times compared to the best CS implementations based on the MATLAB and C++, respectively, and that real-time CS SD-OCT imaging can finally be realized. PMID:24365826

  13. Extended hierarchical Bayesian diffuse optical tomography for removing scalp artifact

    OpenAIRE

    Shimokawa, Takeaki; Kosaka, Takashi; Yamashita, Okito; Hiroe, Nobuo; Amita, Takashi; Inoue, Yoshihiro; Sato, Masa-aki

    2013-01-01

    Functional near-infrared spectroscopy (fNIRS) can non-invasively measure hemodynamic responses in the cerebral cortex with a portable apparatus. However, the observation signal in fNIRS measurements is contaminated by the artifact signal from the hemodynamic response in the scalp. In this paper, we propose a method to separate the signals from the cortex and the scalp by estimating both hemodynamic changes by diffuse optical tomography (DOT). In the inverse problem of DOT, we introduce smooth...

  14. Revealing retroperitoneal liposarcoma morphology using optical coherence tomography

    Science.gov (United States)

    Carbajal, Esteban F.; Baranov, Stepan A.; Manne, Venu G. R.; Young, Eric D.; Lazar, Alexander J.; Lev, Dina C.; Pollock, Raphael E.; Larin, Kirill V.

    2011-02-01

    A new approach to distinguish normal fat, well-differentiated (WD), and dedifferentiated liposarcoma (LS) tumors is demonstrated, based on the use of optical coherence tomography (OCT). OCT images show the same structures seen with conventional histological methods. Our visual grading analysis is supported by numerical analysis of observed structures for normal fat and WDLS samples. Further development could apply the real-time and high resolution advantages of OCT for use in liposarcoma diagnosis and clinical procedures.

  15. Methods for Monitoring Erosion Using Optical Coherence Tomography

    OpenAIRE

    Chan, Kenneth H.; Chan, Andrew C; Darling, Cynthia L; Fried, Daniel

    2013-01-01

    Since optical coherence tomography is well suited for measuring small dimensional changes on tooth surfaces it has great potential for monitoring tooth erosion. The purpose of this study was to explore different approaches for monitoring the erosion of enamel. Application of an acid resistant varnish to protect the tooth surface from erosion has proven effective for providing a reference surface for in vitro studies but has limited potential for in vivo studies. Two approaches which can poten...

  16. Predicting visual outcomes for macular disease using optical coherence tomography

    OpenAIRE

    Pearse A. Keane; Sadda, SriniVas R

    2011-01-01

    In recent years, the management of macular disease has undergone radical changes, in part because of new therapeutic approaches, but also due to the introduction of a new imaging modality – optical coherence tomography (OCT). The application of OCT imaging has clarified many aspects of chorioretinal disease pathophysiology and elucidated many hitherto unrecognized disease characteristics. From an early stage in its development, OCT has also been revolutionary in attempting to extract clinical...

  17. Anatomical Atlas-Guided Diffuse Optical Tomography of Brain Activation

    OpenAIRE

    Custo, Anna; Boas, David A; Tsuzuki, Daisuke; Dan, Ippeita; Mesquita, Rickson; Fischl, Bruce; Grimson, W. Eric L.; Wells, Williams

    2009-01-01

    We describe a neuro imaging protocol that utilizes an anatomical atlas of the human head to guide Diffuse optical tomography of human brain activation. The protocol is demonstrated by imaging the hemodynamic response to median nerve stimulation in three healthy subjects, and comparing the images obtained using a head atlas with the images obtained using the subject-specific head anatomy. The results indicate that using the head atlas anatomy it is possible to reconstruct the location of the b...

  18. Optical coherence tomography imaging of ocular and periocular tumours

    OpenAIRE

    Medina, Carlos A.; Plesec, Thomas; Singh, Arun D.

    2014-01-01

    Optical coherence tomography (OCT) has become pivotal in the practice of ophthalmology. Similar to other ophthalmic subspecialties, ophthalmic oncology has also incorporated OCT into practice. Anterior segment OCT (AS-OCT), ultra-high resolution OCT (UHR-OCT), spectral domain OCT (SD-OCT) and enhanced depth imaging OCT (EDI-OCT), have all been described to be helpful in the diagnosis, treatment planning and monitoring response of ocular and periocular tumours. Herein we discuss the role of OC...

  19. Signal processing in optical coherence tomography for aerospace material characterization:

    OpenAIRE

    Liu, P.; Groves, R.M.; Benedictus, R.

    2013-01-01

    Based on a customized time-domain optical coherence tomography (OCT) system, a series of signal processing approaches have been designed and reviewed. To improve demodulation accuracy and image quality, demodulation approaches such as median filter, Hilbert transform, and envelope detector were investigated with simulated as well as experimental data. Without noise, the Hilbert transform has the best performance, but after considering the narrow-band noise in the modulated signal, the envelop...

  20. Anterior Segment Optical Coherence Tomography Imaging of Haab Striae.

    Science.gov (United States)

    Spierer, Oriel; Cavuoto, Kara M; Suwannaraj, Sirinya; Chang, Ta C

    2015-01-01

    The authors present a case series demonstrating the anterior segment optical coherence tomography (AS-OCT) findings of Haab striae in three patients with congenital glaucoma. The use of AS-OCT in the assessment of Haab striae in pediatric glaucoma is novel, previously undescribed, and possibly allows differentiation between acute and chronic corneal changes. [J Pediatr Ophthalmol Strabismus. 2015;52:e55-e58.]. PMID:26473585

  1. Optical coherence tomography for imaging of skin and skin diseases

    DEFF Research Database (Denmark)

    Mogensen, Mette; Thrane, Lars; Jørgensen, Thomas Martini; Andersen, Peter E.; Jemec, G.B.E.

    2009-01-01

    Optical coherence tomography (OCT) is an emerging imaging technology based on light reflection. It provides real-time images with up to 2-mm penetration into the skin and a resolution of approximately 10 ?m. It is routinely used in ophthalmology. The normal skin and its appendages have been studied, as have many diseases. The method can provide accurate measures of epidermal and nail changes in normal tissue. Skin cancer and other tumors, as well as inflammatory diseases, have been studied and g...

  2. Algorithm for localized adaptive diffuse optical tomography and its application in bioluminescence tomography

    Science.gov (United States)

    Naser, Mohamed A.; Patterson, Michael S.; Wong, John W.

    2014-04-01

    A reconstruction algorithm for diffuse optical tomography based on diffusion theory and finite element method is described. The algorithm reconstructs the optical properties in a permissible domain or region-of-interest to reduce the number of unknowns. The algorithm can be used to reconstruct optical properties for a segmented object (where a CT-scan or MRI is available) or a non-segmented object. For the latter, an adaptive segmentation algorithm merges contiguous regions with similar optical properties thereby reducing the number of unknowns. In calculating the Jacobian matrix the algorithm uses an efficient direct method so the required time is comparable to that needed for a single forward calculation. The reconstructed optical properties using segmented, non-segmented, and adaptively segmented 3D mouse anatomy (MOBY) are used to perform bioluminescence tomography (BLT) for two simulated internal sources. The BLT results suggest that the accuracy of reconstruction of total source power obtained without the segmentation provided by an auxiliary imaging method such as x-ray CT is comparable to that obtained when using perfect segmentation.

  3. Diagnosis of cardiovascular diseases based on diffuse optical tomography system

    Science.gov (United States)

    Yu, Zong-Han; Wu, Chun-Ming; Lin, Yo-Wei; Chuang, Ming-Lung; Tsai, Jui-che; Sun, Chia-Wei

    2008-02-01

    Diffuse optical tomography (DOT) is a technique to assess the spatial variation in absorption and scattering properties of the biological tissues. DOT provides the measurement of changes in concentrations of oxy-hemoglobin and deoxy-hemoglobin. The oxygenation images are reconstructed by the measured optical signals with nearest-neighbor pairs of sources and detectors. In our study, a portable DOT system is built with optode design on a flexible print circuit board (FPCB). In experiments, the hemodynamics temporal evolution of exercises and vessel occlusions are observed with in vivo measurements form normal subjects and some patients in intensive care unit.

  4. Artery phantoms for intravascular optical coherence tomography: healthy arteries.

    Science.gov (United States)

    Bisaillon, Charles-Étienne; Dufour, Marc L; Lamouche, Guy

    2011-09-01

    We present a method to make phantoms of coronary arteries for intravascular optical coherence tomography (IV-OCT). The phantoms provide a calibrated OCT response similar to the layered structure of arteries. The optical properties of each layer are achieved with specific concentrations of alumina and carbon black in a silicone matrix. This composition insures high durability and also approximates the elastic properties of arteries. The phantoms are fabricated in a tubular shape by the successive deposition and curing of liquid silicone mixtures on a lathe setup. PMID:21991552

  5. Optical spectroscopy and Doppler tomography of Cygnus X-2

    OpenAIRE

    Elebert, P.; Callanan, P.J.; Torres, M A P; M.R. Garcia

    2009-01-01

    We present phase resolved optical spectroscopy and Doppler tomography of V1341 Cygni, the optical counterpart to the neutron star low mass X-ray binary Cygnus X-2. We derive a radial velocity curve for the secondary star, finding a projected radial velocity semi-amplitude of K2 = 79 +/- 3 km/s, leading to a mass function of 0.51 +/- 0.06 Msun, ~30% lower than the previous estimate. We tentatively attribute the lower value of K2 (compared to that obtained by other authors) to...

  6. First measurements with the test stand for optical beam tomography

    OpenAIRE

    Wagner, Christopher; Meusel, Oliver; Ulrich, Ratzinger; Reichau, Hermine

    2011-01-01

    A test stand for optical beam tomography was developed. As a new non-destructive beam-diagnostic system for high current ion beams, the test stand will be installed in the low energy beam transport section (LEBT) of the Frankfurt Neutron Source (FRANZ) behind the chopper system. The test stand consists of a rotatable vacuum chamber with a mounted CCD camera. The maximum rotation angle amounts to 270°. In a first phase the optical beam profile measurement and 3D density reconstruction is teste...

  7. Wavefront sensorless adaptive optics optical coherence tomography for in vivo retinal imaging in mice

    OpenAIRE

    Jian, Yifan; Xu, Jing; Gradowski, Martin A.; BONORA, Stefano; Zawadzki, Robert J.; Sarunic, Marinko V.

    2014-01-01

    We present wavefront sensorless adaptive optics (WSAO) Fourier domain optical coherence tomography (FD-OCT) for in vivo small animal retinal imaging. WSAO is attractive especially for mouse retinal imaging because it simplifies optical design and eliminates the need for wavefront sensing, which is difficult in the small animal eye. GPU accelerated processing of the OCT data permitted real-time extraction of image quality metrics (intensity) for arbitrarily selected retinal layers to be optimi...

  8. A comprehensive method for optical-emission computed tomography

    Science.gov (United States)

    Thomas, Andrew; Bowsher, James; Roper, Justin; Oliver, Tim; Dewhirst, Mark; Oldham, Mark

    2010-07-01

    Optical-computed tomography (CT) and optical-emission computed tomography (ECT) are recent techniques with potential for high-resolution multi-faceted 3D imaging of the structure and function in unsectioned tissue samples up to 1-4 cc. Quantitative imaging of 3D fluorophore distribution (e.g. GFP) using optical-ECT is challenging due to attenuation present within the sample. Uncorrected reconstructed images appear hotter near the edges than at the center. A similar effect is seen in SPECT/PET imaging, although an important difference is attenuation occurs for both emission and excitation photons. This work presents a way to implement not only the emission attenuation correction utilized in SPECT, but also excitation attenuation correction and source strength modeling which are unique to optical-ECT. The performance of the correction methods was investigated by the use of a cylindrical gelatin phantom whose central region was filled with a known distribution of attenuation and fluorophores. Uncorrected and corrected reconstructions were compared to a sectioned slice of the phantom imaged using a fluorescent dissecting microscope. Significant attenuation artifacts were observed in uncorrected images and appeared up to 80% less intense in the central regions due to attenuation and an assumed uniform light source. The corrected reconstruction showed agreement throughout the verification image with only slight variations (~5%). Final experiments demonstrate the correction in tissue as applied to a tumor with constitutive RFP.

  9. A Review on the use of Optical Coherence Tomography in Medical Imaging

    Directory of Open Access Journals (Sweden)

    A. Stella

    2011-02-01

    Full Text Available Optical Coherence Tomography (OCT is a Three-dimensional imaging technique with ultrahigh spatial resolution even in highly scattering media. It is based on measurements of the reflected light from tissue discontinuities. Optical coherence tomography delivers high resolution images, because the test is based on light, rather than sound or radio frequency. Optical coherence tomography provides a 1 to 15 µm resolution but only a depth of 1 to 2 mm can be imaged in opaque tissues such as arteries or skin. In transparent tissues such as the eye, greater imaging depths are possible. In addition, optical coherence tomography is capable of providing information about tissue composition. This paper, aims at reviewing the working principle of Optical Coherence Tomography and the quality of the image produced through this technique. A major drawback of Optical Coherence Tomography image is that, it suffers from speckle noise.

  10. Optical Coherence Tomography: Modeling and Applications

    DEFF Research Database (Denmark)

    Thrane, Lars

    2001-01-01

    An analytical model is presented that is able to describe the performance of OCT systems in both the single and multiple scattering regimes simultaneously. This model inherently includes the shower curtain effect, well-known for light propagation through the atmosphere. This effect has been omitted in previous theoretical models of OCT systems. It is demonstrated that the shower curtain effect is of utmost importance in the theoretical description of an OCT system. The analytical model, together with proper noise analysis of the OCT system, enables calculation of the SNR, where the optical properties of the tissue are taken into account. Furthermore, by using the model, it is possible to determine the lateral resolution of OCT systems at arbitrary depths in the scattering tissue. During the Ph.D. thesis project, an OCT system has been constructed, and the theoretical model is verified experimentally using this system. A demonstration of the imaging capabilities of the OCT system is given. Moreover, a novel truereflection OCT imaging algorithm, based on the new OCT model presented in this thesis, is demonstrated. Finally, a theoretical analysis of the Wigner phase-space distribution function for the OCT geometry, i.e., reflection geometry, is developed. As in the new OCT model, multiple scattered photons has been taken into account together with multiple scattering effects. As an important result, a novel method of creating images based on measurements of the momentum width of the Wigner phase-space distribution is presented, and compared with conventional OCT.

  11. A Review on the use of Optical Coherence Tomography in Medical Imaging

    OpenAIRE

    Stella, A.; Bhushan Trivedi

    2011-01-01

    Optical Coherence Tomography (OCT) is a Three-dimensional imaging technique with ultrahigh spatial resolution even in highly scattering media. It is based on measurements of the reflected light from tissue discontinuities. Optical coherence tomography delivers high resolution images, because the test is based on light, rather than sound or radio frequency. Optical coherence tomography provides a 1 to 15 µm resolution but only a depth of 1 to 2 mm can be imaged in opaque tissues such as arteri...

  12. Piezoelectric scanning mirrors for endoscopic optical coherence tomography

    International Nuclear Information System (INIS)

    A novel piezoelectric scanning mirror design for endoscopic optical coherence tomography (OCT) is presented. OCT is an interferometric technique providing microscopic tomographic sectioning of biological samples with mm-range penetration capability in tissue and is suited for integration with endoscopes using fiber-based light delivery to the sample. The piezoelectric scanning mirror was designed to provide wide-range rapid forwarding-looking scanning of the optical beam at the distal end of a compact catheter. The optical scanner provides a large ratio of mirror aperture to device size with rectangular mirror sizes ranging from 600 µm × 840 µm to 840 µm × 1600 µm. Static angular displacements up to ±7° (mechanical angle) were demonstrated and resonance frequencies of hundreds of Hz (and up to 1–2 kHz) were measured, depending on the mirror size. The imaging capability of the piezoelectric scanner was demonstrated using a bench-top spectrometer-based Fourier-domain OCT system

  13. A Low-Cost Method for Optical Tomography

    Directory of Open Access Journals (Sweden)

    Mohammad Ali Ansari

    2012-07-01

    Full Text Available INTRODUCTION: In this study, arrangement of a low-cost optical tomography device compared to other methods such as frequency domain diffuse tomography or time domain diffuse tomography is reported. This low-cost diffuse optical imaging technique is based on the detection of light after propagation in tissue. These detected signals are applied to predict the location of in-homogeneities inside phantoms. The device is assessed for phantoms representing homogenous healthy breast tissues as well as those representing healthy breast tissues with a lesion inside.METHODS: A diode laser at 780nm and 50 mW is used as the light source. The scattered light is then collected from the outer surface of the phantom by a detector. Both laser and detector are fiber coupled. The detector fiber may turn around the phantom to collect light scattered at different angles. Phantoms made of intralipid as the scattering medium and ink as the absorbing medium are used as samples. Light is collected after propagation in the phantoms and the capability of the device in collecting data and detecting lesions inside the phantoms is assessed. The fact that the detection fiber orbits around the sample and detects light from various angles has eliminated the need to use several detectors and optical fibers. The results obtained from experiments are compared with the results obtained from a finite element method (FEM solution of diffusion equation in cylindrical geometry written in FORTRAN.RESULTS: The graphs obtained experimentally and numerically are in good accordance with each other. The device has been able to detect lesions up to 13 mm inside the biological phantom.CONCLUSION: The data achieved by the optical tomography device is compared with the data achieved via a FEM code written in FORTRAN. The results indicate that the presented device is capable of providing the correct pattern of diffusely backscattered and transmitted light. The data achieved from the device is in excellent correlation with the numerical solution of the diffusion equation. Therefore, results indicate the applicability of the reported device. This device may be used as a base for an optical imaging. It is also capable of detecting lesions inside the phantoms

  14. Miniature endoscopic optical coherence tomography for calculus detection.

    Science.gov (United States)

    Kao, Meng-Chun; Lin, Chun-Li; Kung, Che-Yen; Huang, Yi-Fung; Kuo, Wen-Chuan

    2015-08-20

    The effective treatment of periodontitis involves the detection and removal of subgingival dental calculus. However, subgingival calculus is more difficult to detect than supragingival calculus because it is firmly attached to root surfaces within periodontal pockets. To achieve a smooth root surface, clinicians often remove excessive amounts of root structure because of decreased visibility. In addition, enamel pearl, a rare type of ectopic enamel formation on the root surface, can easily be confused with dental calculus in the subgingival environment. In this study, we developed a fiber-probe swept-source optical coherence tomography (SSOCT) technique and combined it with the quantitative measurement of an optical parameter [standard deviation (SD) of the optical coherence tomography (OCT) intensity] to differentiate subgingival calculus from sound enamel, including enamel pearl. Two-dimensional circumferential images were constructed by rotating the miniprobe (0.9 mm diameter) while acquiring image lines, and the adjacent lines in each rotation were stacked to generate a three-dimensional volume. In OCT images, compared to sound enamel and enamel pearls, dental calculus showed significant differences (P<0.001) in SD values. Finally, the receiver operating characteristic curve had a high capacity (area under the curve=0.934) for discriminating between healthy regions (including enamel pearl) and dental calculus. PMID:26368780

  15. Thermal-light full-field optical coherence tomography

    OpenAIRE

    Vabre, Laurent; Dubois, Arnaud; Boccara, Claude

    2002-01-01

    We have built a high-resolution optical coherence tomography (OCT) system, based on a Linnik-type interference microscope, illuminated by a white-light thermal lamp. The extremely short coherence length of the illumination source and the large aperture of the objectives permit resolution close to 1 mm in three dimensions. A parallel detection scheme with a CCD camera provides cross-section x y image acquisition without scanning at a rate of up to 50 Hz. To our knowledge, our system has the hi...

  16. 3D parameter reconstruction in hyperspectral diffuse optical tomography

    Science.gov (United States)

    Saibaba, Arvind K.; Krishnamurthy, Nishanth; Anderson, Pamela G.; Kainerstorfer, Jana M.; Sassaroli, Angelo; Miller, Eric L.; Fantini, Sergio; Kilmer, Misha E.

    2015-03-01

    The imaging of shape perturbation and chromophore concentration using Diffuse Optical Tomography (DOT) data can be mathematically described as an ill-posed and non-linear inverse problem. The reconstruction algorithm for hyperspectral data using a linearized Born model is prohibitively expensive, both in terms of computation and memory. We model the shape of the perturbation using parametric level-set approach (PaLS). We discuss novel computational strategies for reducing the computational cost based on a Krylov subspace approach for parameteric linear systems and a compression strategy for the parameter-to-observation map. We will demonstrate the validity of our approach by comparison with experiments.

  17. Spectral domain second-harmonic optical coherence tomography

    Science.gov (United States)

    Sarunic, Marinko V.; Applegate, Brian E.; Izatt, Joseph A.

    2005-09-01

    Optical coherence tomography (OCT) provides micrometer-scale structural imaging by coherent detection of backscattered light. Molecular contrast in OCT has been demonstrated using transient absorption, coherent anti-Stokes Raman scattering, and second-harmonic (SH) generation. The sensitivity of molecular contrast signals can be enhanced by use of Fourier domain techniques. We have constructed a spectrometer-based Fourier domain SH-OCT system for simultaneous acquisition of the fundamental and SH signals. We report a > 30 dB increase in SH sensitivity over a similar time domain SH-OCT system and demonstrate contrast between cartilage and bone using collagen as the contrast agent.

  18. Intracoronary optical coherence tomography: a review of clinical applications.

    Science.gov (United States)

    Zivelonghi, Carlo; Ghione, Matteo; Kilickesmez, Kadriye; Loureiro, Rodrigo Estevez; Foin, Nicolas; Lindsay, Alistair; de Silva, Ranil; Ribichini, Flavio; Vassanelli, Corrado; Di Mario, Carlo

    2014-07-01

    Optical coherence tomography (OCT) is a light-based technology that provides very high spatial resolution images. OCT has been initially employed as a research tool to investigate plaque morphology and stent strut coverage. The introduction of frequency domain OCT allowing fast image acquisition during a prolonged contrast injection via the guiding catheter has made OCT applicable for guidance of coronary interventions. In this manuscript, the various applications of OCT are reviewed, from assessment of plaque vulnerability and severity to characteristics of unstable lesions and thrombus burden to stent optimization and evaluation of late results. PMID:24922045

  19. Combined two-photon microscopy and angiographic optical coherence tomography

    Science.gov (United States)

    Kim, Bumju; Wang, Tae Jun; Li, Qingyun; Nam, Jutaek; Hwang, Sekyu; Chung, Euiheon; Kim, Sungjee; Kim, Ki Hean

    2013-08-01

    A combined two-photon microscopy (TPM) and angiographic optical coherence tomography (OCT) is developed, which can provide molecular, cellular, structural, and vascular information of tissue specimens in vivo. This combined system is implemented by adding an OCT vasculature visualization method to the previous combined TPM and OCT, and then is applied to in vivo tissue imaging. Two animal models, a mouse brain cranial window model and a mouse ear cancer model, are used. Both molecular, cellular information at local regions of tissues, and structural, vascular information at relatively larger regions are visualized in the same sections. In vivo tissue microenvironments are better elucidated by the combined TPM and angiographic OCT.

  20. Frequency comb swept lasers for optical coherence tomography

    OpenAIRE

    Tsai, Tsung-Han; Zhou, Chao; Desmond C Adler; Fujimoto, James G.

    2010-01-01

    We demonstrate a frequency comb (FC) swept laser and a frequency comb Fourier domain mode locked (FC-FDML) laser for applications in optical coherence tomography (OCT). The fiber-based FC swept lasers operate at a sweep rate of 1kHz and 120kHz, respectively over a 135nm tuning range centered at 1310nm with average output powers of 50mW. A 25GHz free spectral range frequency comb filter in the cavity of swept lasers causes the lasers to generate a series of well defined frequency steps. The na...

  1. Reflectance diffuse optical tomography. Its application to human brain mapping

    International Nuclear Information System (INIS)

    We report the successful application of reflectance diffuse optical tomography (DOT) using near-infrared light with the new reconstruction algorithm that we developed to the observation of regional hemodynamic changes in the brain under specific mental tasks. Our results reveal the heterogeneous distribution of oxyhemoglobin and deoxyhemoglobin in the brain, showing complementary images of oxyhemoglobin and deoxyhemoglobin changes in certain regions. We conclude that our reflectance DOT has practical potential for human brain mapping, as well as in the diagnostic imaging of brain diseases. (author)

  2. Spectroscopy by joint spectral and time domain optical coherence tomography

    Science.gov (United States)

    Szkulmowski, Maciej; Tamborski, Szymon; Wojtkowski, Maciej

    2015-03-01

    We present the methodology for spectroscopic examination of absorbing media being the combination of Spectral Optical Coherence Tomography and Fourier Transform Spectroscopy. The method bases on the joint Spectral and Time OCT computational scheme and simplifies data analysis procedure as compared to the mostly used windowing-based Spectroscopic OCT methods. The proposed experimental setup is self-calibrating in terms of wavelength-pixel assignment. The performance of the method in measuring absorption spectrum was checked with the use of the reflecting phantom filled with the absorbing agent (indocyanine green). The results show quantitative accordance with the controlled exact results provided by the reference method.

  3. Optical coherence tomography for glucose monitoring in blood

    Science.gov (United States)

    Ullah, Hafeez; Hussain, Fayyaz; Ikram, Masroor

    2015-08-01

    In this review, we have discussed the potential application of the emerging imaging modality, i.e., optical coherence tomography (OCT) for glucose monitoring in biological tissues. OCT provides monitoring of glucose diffusion in different fibrous tissues like in sclera by determining the permeability rate with acceptable accuracy both in type 1 and in type 2 diabetes. The maximum precision of glucose measurement in Intralipid suspensions, for example, with the OCT technique yields the accuracy up to 4.4 mM for 10 % Intralipid and 2.2 mM for 3 % Intralipid.

  4. Optical coherence photoacoustic microscopy: accomplishing optical coherence tomography and photoacoustic microscopy with a single light source

    OpenAIRE

    ZHANG, XIANGYANG; Zhang, Hao F.; Jiao, Shuliang

    2012-01-01

    We developed optical coherence photoacoustic microscopy (OC-PAM) to demonstrate that the functions of optical coherence tomography (OCT) and photoacoustic microscopy (PAM) can be achieved simultaneously by using a single illuminating light source. We used a pulsed broadband laser centered at 580 nm and detected the absorbed photons through photoacoustic detection and the back-scattered photons with an interferometer. In OC-PAM, each laser pulse generates both one OCT A-line and one PAM A-line...

  5. Adaptive optics optical coherence tomography for in vivo mouse retinal imaging

    OpenAIRE

    Jian, Yifan; Zawadzki, Robert J.; Sarunic, Marinko V.

    2013-01-01

    Small animal models of retinal diseases are important to vision research, and noninvasive high resolution in vivo rodent retinal imaging is becoming an increasingly important tool used in this field. We present a custom Fourier domain optical coherence tomography (FD-OCT) instrument for high resolution imaging of mouse retina. In order to overcome aberrations in the mouse eye, we incorporated a commercial adaptive optics system into the sample arm of the refractive FD-OCT system. Additionally...

  6. Extending the effective imaging range of Fourier domain optical coherence tomography using a fiber optic switch

    OpenAIRE

    Wang, Hui; Pan, Yinsheng; Andrew M. Rollins

    2008-01-01

    The effective imaging range of Fourier-domain optical coherence tomography is limited by fall-off. We present a very simple method to extend the effective imaging range with dual reference arms and a high speed fiber optic switch. The effective imaging range was increased by 1.8 with two reference arms compared with a single reference arm. Ex vivo tissue images showed significantly improved sensitivity over a large imaging range. Further extension of the imaging range is feasible with multipl...

  7. Assessing carotid atherosclerosis by fiber-optic multispectral photoacoustic tomography

    Science.gov (United States)

    Hui, Jie; Li, Rui; Wang, Pu; Phillips, Evan; Bruning, Rebecca; Liao, Chien-Sheng; Sturek, Michael; Goergen, Craig J.; Cheng, Ji-Xin

    2015-03-01

    Atherosclerotic plaque at the carotid bifurcation is the underlying cause of the majority of ischemic strokes. Noninvasive imaging and quantification of the compositional changes preceding gross anatomic changes within the arterial wall is essential for diagnosis of disease. Current imaging modalities such as duplex ultrasound, computed tomography, positron emission tomography are limited by the lack of compositional contrast and the detection of flow-limiting lesions. Although high-resolution magnetic resonance imaging has been developed to characterize atherosclerotic plaque composition, its accessibility for wide clinical use is limited. Here, we demonstrate a fiber-based multispectral photoacoustic tomography system for excitation of lipids and external acoustic detection of the generated ultrasound. Using sequential ultrasound imaging of ex vivo preparations we achieved ~2 cm imaging depth and chemical selectivity for assessment of human arterial plaques. A multivariate curve resolution alternating least squares analysis method was applied to resolve the major chemical components, including intravascular lipid, intramuscular fat, and blood. These results show the promise of detecting carotid plaque in vivo through esophageal fiber-optic excitation of lipids and external acoustic detection of the generated ultrasound. This imaging system has great potential for serving as a point-ofcare device for early diagnosis of carotid artery disease in the clinic.

  8. Clinical analysis of buried optic nerve drusen with optical coherence tomography examination

    Directory of Open Access Journals (Sweden)

    Juan Liu

    2013-11-01

    Full Text Available AIM: To explore the specific image of buried optic nerve drusen during optical coherence tomography(OCTexamination. METHODS: A retrospective study was made on 6 patients with buried optic nerve drusen(6 eyesdiagnosed by fundus fluorescein angiography(FFAand B scan examination. RESULTS: The high fluorescence area of optic disc showed on the FFA image of all 6 patients imaged with the spectral OCT revealed cluster of calcium deposits. These deposits demonstrated specific wide bars with high reflectivity casting shadows underneath and had lacunae appearance. CONCLUSION: Buried optic nerve drusen showed specific image in the spectral OCT examination. Thus, spectral OCT can serve as an assistant examination method with relatively prominent features for diagnosing buried optic nerve drusen. It can help to raise the detection rate of buried optic nerve drusen.

  9. High-speed optical coherence tomography using fiberoptic acousto-optic phase modulation.

    Science.gov (United States)

    Xie, Tuqiang; Wang, Zhenguo; Pan, Yingtian

    2003-12-01

    We report a new rapid-scanning optical delay device suitable for high-speed optical coherence tomography (OCT) in which an acousto-optic modulator (AOM) is used to independently modulate the Doppler frequency shift of the reference light beam for optical heterodyne detection. Experimental results show that the fluctuation of the measured Doppler frequency shift is less than +/-0.2% over 95% duty cycle of OCT imaging, thus allowing for enhanced signal-to-noise ratio of optical heterodyne detection. The increased Doppler frequency shift by AOM also permits complete envelop demodulation without the compromise of reducing axial resolution; if used with a resonant rapid-scanning optical delay, it will permit high-performance real-time OCT imaging. Potentially, this new rapid-scanning optical delay device will improve the performance of high-speed Doppler OCT techniques. PMID:19471447

  10. Imaging of oral pathological tissue using optical coherence tomography

    Science.gov (United States)

    Canjau, Silvana; Todea, Carmen; Sinescu, Cosmin; Duma, Virgil-Florin; Topala, Florin I.; Podoleanu, Adrian G.

    2014-01-01

    Oral squamous cell carcinoma (OSCC) constitutes 90% of oral cancer. Early detection is a cornerstone to improve survival. Interaction of light with tissues may highlight changes in tissue structure and metabolism. We propose optical coherence tomography (OCT), as a non-invasive diagnosis method, being a new high-resolution optical technique that permits tri-dimensional (3-D), real-time imaging of near surface abnormalities in complex tissues. In this study half of the excisional biopsy was directed to the pathologist and the other half was assigned for OCT investigation. Histopathology validated the results. Areas of OSCC of the buccal mucosa were identified in the OCT images. The elements obserced included extensive epithelial down-growth, the disruption of the basement membrane, with areas of erosion, an epithelial layer that was highly variable in thickness and invasion into the sub-epithelial layers. Therefore, OCT appears to be a highly promising imaging modality.

  11. Optical coherence tomography a clinical and technical update

    CERN Document Server

    Cunha-Vaz, José

    2012-01-01

    Optical Coherence Tomography represents the ultimate noninvasive  ocular imaging technique although being in the field for over two-decades. This book encompasses both medical and technical developments and recent achievements. Here, the authors cover the field of application from the anterior to the posterior ocular segments (Part I) and present a comprehensive review on the development of OCT. Important developments towards  clinical applications are covered in Part II, ranging from the adaptive optics to the integration on a slit-lamp, and passing through new structural  and functional information extraction from OCT data. The book is intended to be informative, coherent and comprehensive for both the medical and technical communities and aims at easing the communication between the two fields and bridging the gap between the two scientific communities.

  12. Full-field optical coherence tomography for tissue imaging

    Science.gov (United States)

    Dubois, A.

    2015-06-01

    Full-field optical coherence tomography (FF-OCT) is a biomedical imaging technique based on white-light interference microscopy. FF-OCT produces tomographic images by arithmetic combination of interferometric images acquired with an area camera and by illuminating the whole field to be imaged with low-coherence light. The major interest for FFOCT lies in its high imaging resolution in both transverse and axial directions using a simple and robust experimental arrangement. This paper provides an overview of the principle of FF-OCT. The system characteristics are reported in details, including the detection sensitivity and spatial resolution. Several of the challenges, advantages and drawbacks of the technique are discussed and compared with other optical imaging techniques such as conventional OCT and confocal microscopy. Images of normal and diseased human breast tissue are presented to illustrate the potential of FF-OCT for cellular-level anatomopathological examinations without sample processing.

  13. Non-diffusing photochromic gel for optical computed tomography phantoms

    International Nuclear Information System (INIS)

    This study examines photochromic response in radiation sensitive hydrogels. Genipin, crosslinked, gelatin gel can support high resolution images because the chromophores do not diffuse. A low power, 633 nm He-Ne laser was used to write lines into the gels by a photobleaching reaction. Optical cone-beam computed tomography (CBCT) scans mapped the high resolution images in 3D with 0.25 mm voxel resolution. A straight line was written into a deformed gel and then readout in its relaxed, initial shape. The curved, photo-bleached line demonstrated deformable 3D dosimetry is possible with this system to the balloon edge. High resolution, photochromic images provide key information for characterizing optical CT scanners and 3D dosimeters. Many, ionizing radiation, dosimeter materials demonstrate either a photochromic or photothermal response, allowing this approach to be widely used in quantitative 3D scanning.

  14. Non-diffusing photochromic gel for optical computed tomography phantoms

    Science.gov (United States)

    Jordan, K.

    2013-06-01

    This study examines photochromic response in radiation sensitive hydrogels. Genipin, crosslinked, gelatin gel can support high resolution images because the chromophores do not diffuse. A low power, 633 nm He-Ne laser was used to write lines into the gels by a photobleaching reaction. Optical cone-beam computed tomography (CBCT) scans mapped the high resolution images in 3D with 0.25 mm voxel resolution. A straight line was written into a deformed gel and then readout in its relaxed, initial shape. The curved, photo-bleached line demonstrated deformable 3D dosimetry is possible with this system to the balloon edge. High resolution, photochromic images provide key information for characterizing optical CT scanners and 3D dosimeters. Many, ionizing radiation, dosimeter materials demonstrate either a photochromic or photothermal response, allowing this approach to be widely used in quantitative 3D scanning.

  15. Sound field reconstruction using acousto-optic tomography

    DEFF Research Database (Denmark)

    Torras Rosell, Antoni; Barrera Figueroa, Salvador

    2012-01-01

    When sound propagates through a medium, it results in pressure fluctuations that change the instantaneous density of the medium. Under such circumstances, the refractive index that characterizes the propagation of light is not constant, but influenced by the acoustic field. This kind of interaction is known as the acousto-optic effect. The formulation of this physical phenomenon into a mathematical problem can be described in terms of the Radon transform, which makes it possible to reconstruct an arbitrary sound field using tomography. The present work derives the fundamental equations governing the acousto-optic effect in air, and demonstrates that it can be measured with a laser Doppler vibrometer in the audible frequency range. The tomographic reconstruction is tested by means of computer simulations and measurements. The main features observed in the simulations are also recognized in the experimental results. The effectiveness of the tomographic reconstruction is further confirmed with representations ofthe very same sound field measured with a traditional microphone array.

  16. Performance of latex balloons for optical computed tomography

    International Nuclear Information System (INIS)

    Latex balloons filled with radiation sensitive hydrogels were evaluated as 3D dosimeters with optical computed tomography (CT) readout. Custom balloons, with less than 10 cm diameters, were made from latex sheets. Commercial, 13 cm diameter, clear balloons were investigated for larger volumes. Ferrous-xylenol orange and genipin gelatin gels selected for 1 and 30 Gy experiments, respectively. The thin stretched latex membrane allowed optical imaging to within 1 mm of the interior balloon edge. Reconstructed dose distributions demonstrated valid measurements to within 2 mm of the balloon surface. The rubber membrane provides a hybrid approach to deforming hydrogels. Uniform irradiation of a deformed gel resulted in a uniform dose being measured when scanned in the relaxed, initial balloon shape. The 13 cm diameter balloons were also effective and inexpensive vessels for hydrogels due to their high clarity, thinness and mechanical strength. Latex balloons represent an inexpensive method to obtain useful information from nearly the entire dosimeter volume.

  17. Limited-angle holographic tomography with optically controlled projection generation

    Science.gov (United States)

    Ku?, A.; Krauze, W.; Kujawi?ska, M.

    2015-03-01

    In the paper we demonstrate a holographic tomography system with limited angle of projections, realized by optical- only, diffraction-based beam steering. The system created for this purpose is a Mach-Zehnder interferometer modified to serve as a digital holographic microscope with high Numerical Aperture illumination module and a Spatial Light Modulator. Such solution is fast and robust. Apart from providing an elegant solution to the viewing angle shifting, it also adds new capabilities of the holographic microscope system. SLM, being an active optical element, allows wavefront correction in order to improve measurement accuracy. Integrated phase data captured with different scenarios within a highly limited angular range are processed by a new tomographic reconstruction algorithm based on the compressed sensing technique: total variation minimization, which is applied to non-piecewise constant samples. Finally, the accuracy of full measurement and processing path proposed is tested for a calibrated 3D microobject.

  18. Retinal oximetry using ultrahigh-resolution optical coherence tomography

    Directory of Open Access Journals (Sweden)

    Ye Y

    2012-12-01

    Full Text Available Yufeng Ye,1,2 Hong Jiang,2,3 Meixiao Shen,4 Byron L Lam,2 Delia Cabrera DeBuc,2 Lili Ge,2,4 Mitra Sehi,2 Jianhua Wang21Hangzhou First People’s Hospital, Hangzhou, China; 2Bascom Palmer Eye Institute, 3Neurology, University of Miami, Miami, FL, USA; 4School of Ophthalmology and Optometry, Wenzhou Medical College, Wenzhou, Zhejiang, ChinaBackground: The purpose of this study was to investigate the repeatability of retinal oximetry using slit-lamp adapted ultrahigh-resolution optical coherence tomography (SL-UHR-OCT.Methods: SL-UHR-OCT was developed and fringe patterns were obtained for a major retinal artery and a major retinal vein. A-scans at the central wavelengths of 805 nm and 855 nm were analyzed for calculating optical density ratios (ODRs, from which the percentage oxygen saturation was calculated. Measurements were made on two occasions for each person. Repeatability and coefficients of repeatability were calculated.Results: The mean ODRs of the artery were 0.79 ± 0.86 and 0.88 ± 0.97 in sessions 1 and 2, respectively. The mean ODRs of the vein were ?0.08 ± 0.69 and 0.14 ± 0.77 between the two sessions, and were significantly lower than that of the artery (P < 0.05. The coefficients of repeatability were 1.44 and 1.81 for the artery and vein, respectively. The mean oxygen saturation of the major retinal artery was 94% ± 45% and 98% ± 51% in sessions 1 and 2, respectively, and the mean oxygen saturation of the major retinal vein was 48% ± 36% and 60% ± 40% between sessions.Conclusion: Optical coherence tomographic oximetry for evaluating retinal oxygen saturation was subject to variation, although the averaged measurements in repeated sessions were matched. Further work on reducing variation will be needed.Keywords: ultrahigh-resolution optical coherence tomography, oximetry

  19. Cell death monitoring using quantitative optical coherence tomography methods

    Science.gov (United States)

    Farhat, Golnaz; Yang, Victor X. D.; Kolios, Michael C.; Czarnota, Gregory J.

    2011-03-01

    Cell death is characterized by a series of predictable morphological changes, which modify the light scattering properties of cells. We present a multi-parametric approach to detecting changes in subcellular morphology related to cell death using optical coherence tomography (OCT). Optical coherence tomography data were acquired from acute myeloid leukemia (AML) cells undergoing apoptosis over a period of 48 hours. Integrated backscatter (IB) and spectral slope (SS) were computed from OCT backscatter spectra and statistical parameters were extracted from a generalized gamma (GG) distribution fit to OCT signal intensity histograms. The IB increased by 2-fold over 48 hours with significant increases observed as early as 4 hours. The SS increased in steepness by 2.5-fold with significant changes at 12 hours, while the GG parameters were sensitive to apoptotic changes at 24 to 48 hours. Histology slides indicated nuclear condensation and fragmentation at 24 hours, suggesting the late scattering changes could be related to nuclear structure. A second series of measurements from AML cells treated with cisplatin, colchicine or ionizing radiation suggested that the GG parameters could potentially differentiate between modes of cell death. Distinct cellular morphology was observed in histology slides obtained from cells treated under each condition.

  20. Optical spectroscopy and Doppler tomography of Cygnus X-2

    CERN Document Server

    Elebert, P; Torres, M A P; García, M R

    2009-01-01

    We present phase resolved optical spectroscopy and Doppler tomography of V1341 Cygni, the optical counterpart to the neutron star low mass X-ray binary Cygnus X-2. We derive a radial velocity curve for the secondary star, finding a projected radial velocity semi-amplitude of K2 = 79 +/- 3 km/s, leading to a mass function of 0.51 +/- 0.06 Msun, ~30% lower than the previous estimate. We tentatively attribute the lower value of K2 (compared to that obtained by other authors) to variations in the X-ray irradiation of the secondary star at different epochs of observations. The limited phase coverage and/or longer timebase of previous observations may also contribute to the difference in K2. Our value for the mass function implies a primary mass of 1.5 +/- 0.3 Msun, somewhat lower than previous dynamical estimates, but consistent with the value found by analysis of type-I X-ray bursts from this system. Our Doppler tomography of the broad He II 4686 line reveals that most of the emission from this line is produced o...

  1. Corrections to linear methods for diffuse optical tomography using approximation error modelling

    OpenAIRE

    2010-01-01

    Linear reconstruction methods in diffuse optical tomography have been found to produce reasonable good images in cases in which the variation in optical properties within the medium is relatively small and a reference measurement with known background optical properties is available. In this paper we examine the correction of errors when using a first order Born approximation with an infinite space Green’s function model as the basis for linear reconstruction in diffuse optical tomography, wh...

  2. Optical coherence tomography for retinal imaging in multiple sclerosis

    Directory of Open Access Journals (Sweden)

    Zimmermann H

    2014-12-01

    Full Text Available Hanna Zimmermann,1 Timm Oberwahrenbrock,1 Alexander U Brandt,1 Friedemann Paul,1–3 Jan Dörr1,2 1NeuroCure Clinical Research Center, 2Clinical and Experimental Multiple Sclerosis Research Center, 3Department of Neurology, Charité – Universitätsmedizin Berlin, Berlin, Germany Abstract: Visual disturbances caused by inflammatory and demyelinating processes of the visual system, mainly in the optic nerve, are a common symptom in multiple sclerosis (MS. Optical coherence tomography (OCT is a tool that is increasingly used for quantifying retinal damage in MS and other neurologic diseases. Based on spectral interferometry, it uses low-coherent infrared light to generate high-resolution spatial images of the retina. The retinal nerve fiber layer (RNFL consists of unmyelinated axons that form the optic nerve, and thus represents a part of the central nervous system. OCT allows for noninvasive measurements of RNFL thickness in micrometer resolution. With the help of OCT, researchers have managed to demonstrate that eyes of MS patients show distinct RNFL thinning after an event of acute optic neuritis in MS, and even subclinical damage in eyes with no previous optic neuritis. OCT is also a useful tool in terms of providing a differential diagnosis of MS toward, for example, neuromyelitis optica, a disease that usually shows stronger retinal thinning, or Susac syndrome, which is characterized by distinct patchy thinning of the inner retinal layers. RNFL thinning is associated with magnetic resonance imaging-derived measurements of the brain, such as whole-brain atrophy, gray and white matter atrophy, and optic radiation damage. These features suggest that OCT-derived retinal measurements are a complement for measuring central nervous system neurodegeneration in the context of clinical trials – for example, with neuroprotective substances. Keywords: visual function, multiple sclerosis, optic neuritis, retinal nerve fiber layer, neuromyelitis optica, Susac syndrome

  3. High-resolution retinal imaging using adaptive optics and Fourier-domain optical coherence tomography

    Science.gov (United States)

    Olivier, Scot S. (Livermore, CA); Werner, John S. (Davis, CA); Zawadzki, Robert J. (Sacramento, CA); Laut, Sophie P. (Pasedena, CA); Jones, Steven M. (Livermore, CA)

    2010-09-07

    This invention permits retinal images to be acquired at high speed and with unprecedented resolution in three dimensions (4.times.4.times.6 .mu.m). The instrument achieves high lateral resolution by using adaptive optics to correct optical aberrations of the human eye in real time. High axial resolution and high speed are made possible by the use of Fourier-domain optical coherence tomography. Using this system, we have demonstrated the ability to image microscopic blood vessels and the cone photoreceptor mosaic.

  4. Optical coherence tomography demonstrating macular retinal nerve fiber thinning in advanced optic disc drusen

    OpenAIRE

    Hassan, Ali; Gouws, Pieter

    2014-01-01

    Optic disc drusen (ODD) are extracellular proteinaceous excrescences in the optic nerve head. They enlarge over time and can cause damage to nerve fibers with resulting loss of visual field. The authors report a case of advanced ODD in which macular optical coherence tomography demonstrated retinal nerve fiber thinning. A single case report of a 42-year-old woman with known ODD presented to the eye clinic with worsening field of vision which was impacting on her daily life. The patient was su...

  5. Large-scale optical diffraction tomography for inspection of optical plastic lenses

    CERN Document Server

    Kim, Kyoohyun; Park, YongKeun

    2015-01-01

    Herein is presented an optical diffraction tomography (ODT) technique for measuring 3-D refractive index (RI) maps of optical plastic lenses. A Mach-Zehnder interferometer was used to measure multiple complex optical fields of a plastic lens immersed in RI matching oil, at various rotational orientations. From this, ODT was used to reconstruct a 3-D RI distribution of the plastic lens with unprecedented RI sensitivity (dn = 4.21 x 10^-5) and high resolution (12.8 um). As a demonstration, 3-D RI distributions of a 2-mm-diameter borosilicate sphere and a 5-mm-diameter plastic lens

  6. Optical coherence tomography findings and retinal changes after vitrectomy for optic disc pit maculopathy

    Directory of Open Access Journals (Sweden)

    Gaurav Sanghi

    2014-01-01

    Full Text Available Purpose : To study the optical coherence tomography (OCT patterns in optic disc pit maculopathy and retinal changes after vitreous surgery. Materials and Methods : Retrospective review of consecutive cases with optic disc pit maculopathy seen at two tertiary eye institutes from January 2005 to June 2009. Results : Twenty-four eyes of 23 patients are included. The presenting visual acuity ranged from 20/400 to 20/20 (median:20/80. The median age at presentation was 24 years (range, 6-57 years. Optical coherence tomography demonstrated a combination of retinoschisis and outer layer detachment (OLD in 19 (79.17% eyes, OLD only in 3 (12.5% eyes and retinoschisis only in 2 (8.33% eyes. An obvious communication (outer layer hole between the schisis and OLD was seen in 14 (73.68% of the 19 eyes with both features. Of the 21 eyes with retinoschisis, schisis was present in multiple layers in 15 (71.43% and single layer in 6 (28.57% eyes. Eleven eyes underwent pars plana vitrectomy including creation of posterior vitreous detachment (PVD, fluid-air exchange, low intensity laser photocoagulation at the temporal edge of the optic disc pit and non-expansile perfluoropropane gas (14% injection. Five (45.45% of 11 eyes undergoing vitrectomy had complete resolution and 4 (36.36% eyes had partial resolution of maculopathy. Visual acuity improved in 8 (72.72% of 11 eyes. Conclusion : Optical coherence tomography demonstrates multiple layer schisis and outer layer detachment as main features of optic disc pit maculopathy. Vitrectomy with PVD induction, laser photocoagulation and gas tamponade results in anatomical and visual improvement in most cases with optic disc pit maculopathy.

  7. Cone beam optical computed tomography-based gel dosimetry

    Science.gov (United States)

    Olding, Timothy Russell

    The complex dose distributions delivered by modern, conformal radiation therapy techniques present a considerable challenge in dose verification. Traditional measurement tools are difficult and laborious to use, since complete verification requires that the doses be determined in three dimensions (3D). The difficulty is further complicated by a required target accuracy of +/- 5% for the dose delivery. Gel dosimetry is an attractive option for realizing a tissue-equivalent, 3D dose verification tool with high resolution readout capabilities. However, much important work remains to be completed prior to its acceptance in the clinic. The careful development of easily accessible, fast optical readout tools such as cone beam optical computed tomography (CT) in combination with stable and reliable low-toxicity gel dosimeters is one key step in this process. In this thesis, the performance capabilities and limitations of the two main classes of cone beam optical CT-based absorbing and scattering gel dosimetry are characterized, and their measurement improved through careful matching of dosimeter and scanner performance. These systems are then applied to the evaluation of clinically relevant complex dose distributions. Three-dimensional quality assurance assessments of complex treatment plan dose distributions are shown to be feasible using an optically absorbing Fricke-xylenol-orange-gelatin-based gel dosimeter. Better than 95% voxel agreement is achieved between the plan and the delivery, using 3% dose difference and 3 mm spatial distance-to-agreement gamma function comparison criteria. Small field dose delivery evaluations are demonstrated to be viable using an optically scattering N-isopropylacrylamide (NIPAM)-based polymer gel, with the same comparison criteria. Full treatment process quality assurance is also possible using a NIPAM dosimeter in-phantom, but is limited in its accuracy due to the inherent difficulty of managing the effects of stray light pertubation in the optical attenuation-to-dose calibration.

  8. Observation of the pulp horn by swept source optical coherence tomography and cone beam computed tomography

    Science.gov (United States)

    Iino, Yoshiko; Yoshioka, Toshihiko; Hanada, Takahiro; Ebihara, Arata; Sunakawa, Mitsuhiro; Sumi, Yasunori; Suda, Hideaki

    2015-02-01

    Cone-beam computed tomography (CBCT) is one of the most useful diagnostic techniques in dentistry but it involves ionizing radiation, while swept source optical coherence tomography (SS-OCT) has been introduced recently as a nondestructive, real-time, high resolution imaging technique using low-coherence interferometry, which involves no ionizing radiation. The purpose of this study was to evaluate the ability of SS-OCT to detect the pulp horn (PH) in comparison with that of CBCT. Ten extracted human mandibular molars were used. After horizontally removing a half of the tooth crown, the distance from the cut dentin surface to PH was measured using microfocus computed tomography (Micro CT) (SL) as the gold standard, by CBCT (CL) and by SS-OCT (OL). In the SS-OCT images, only when PH was observed beneath the overlying dentin, the distance from the cut dentin surface to PH was recorded. If the pulp was exposed, it was defined as pulp exposure (PE). The results obtained by the above three methods were statistically analyzed by Spearman's rank correlation coefficient at a significance level of p < 0.01. SS-OCT detected the presence of PH when the distance from the cut dentin surface to PH determined by SL was 2.33 mm or less. Strong correlations of the measured values were found between SL and CL (r=0.87), SL and OL (r=0.96), and CL and OL (r=0.86). The results showed that SS-OCT images correlated closely with CBCT images, suggesting that SS-OCT can be a useful tool for the detection of PH.

  9. Optimisation of post mortem cardiac computed tomography compared to optical coherence tomography and histopathology - Technical note

    DEFF Research Database (Denmark)

    Precht, Helle; Leth, Peter Mygind

    2014-01-01

    Introduction: Coronary atherosclerosis is a leading cause of mortality. New technological developments in computed tomography (CT), including dual energy, iterative reconstructions and high definition scanning, could significantly improve the non-invasive identification of atherosclerosis plaques. Here, a new method for optimising cardiac coronary CT with optical coherence tomography (OCT) and histopathology is presented. Materials and methods: Twenty human hearts obtained from autopsies were used. A contrast agent that solidifies after cooling was injected into the coronary arteries. CT scanning was performed on the heart alone as well as with the heart in a chest phantom. We used eight different CT protocols and the newest CT technique to image every heart. The OCT and CT images were compared with their corresponding histological sections. A procedure for ensuring the correct alignment of the images was also developed. Results: We have succeeded in developing a new method for post-mortem coronary CT angiography in which an autopsy heart is placed in a chest phantom to simulate clinical CT. Conclusion: The new method permits comparison of CT with OCT and histopathology. This method can also be used for evaluating coronary artery disease, including characterising plaques, and will eventually allow for the detection of rupture-prone plaques, which we will assess in a future study. Clinical testing is our ultimate goal. © 2013 Elsevier Ltd.

  10. Radiographic, microcomputer tomography, and optical coherence tomography investigations of ceramic interfaces

    Science.gov (United States)

    Sinescu, Cosmin; Negrutiu, Meda Lavinia; Ionita, Ciprian; Topala, Florin; Petrescu, Emanuela; Rominu, Roxana; Pop, Daniela Maria; Marsavina, Liviu; Negru, Radu; Bradu, Adrian; Rominu, Mihai; Podoleanu, Adrian Gh.

    2010-12-01

    Imagistic investigation of the metal-ceramic crowns and fixed partial prostheses represent a very important issue in nowadays dentistry. At this time, in dental office, it is difficult or even impossible to evaluate a metal ceramic crown or bridge before setting it in the oral cavity. The possibilities of ceramic fractures are due to small fracture lines or material defects inside the esthetic layers. Material and methods: In this study 25 metal ceramic crowns and fixed partial prostheses were investigated by radiographic method (Rx), micro computer tomography (MicroCT) and optical coherence tomography (OCT) working in Time Domain, at 1300 nm. The OCT system contains two interferometers and one scanner. For each incident analysis a stuck made of 100 slices was obtain. These slices were used in order to obtain a 3D model of the ceramic interface. Results: RX and MicroCT are very powerful instruments that provide a good characterization of the dental construct. It is important to observe the reflections due to the metal infrastructure that could affect the evaluation of the metal ceramic crowns and bridges. The OCT investigations could complete the imagistic evaluation of the dental construct by offering important information when it is need it.

  11. Monitoring changes of optical attenuation coefficients of acupuncture points during laser acupuncture by optical coherence tomography

    Science.gov (United States)

    Huang, Yimei; Yang, Hongqin; Wang, Yuhua; Zheng, Liqin; Xie, Shusen

    2010-11-01

    The physical properties of acupuncture point were important to discover the mechanism of acupuncture meridian. In this paper, we used an optical coherence tomography to monitor in vivo the changes of optical attenuation coefficients of Hegu acupuncture point and non-acupuncture point during laser irradiation on Yangxi acupuncture point. The optical attenuation coefficients of Hegu acupuncture point and non-acupuncture point were obtained by fitting the raw data according to the Beer-Lambert's law. The experimental results showed that the optical attenuation coefficient of Hegu acupuncture point decreased during the laser acupuncture, in contrast to a barely changed result in that of non-acupuncture point. The significant change of optical attenuation coefficient of Hegu acupuncture point indicated that there was a correlation between Hegu and Yangxi acupuncture points to some extent.

  12. Approach to retina optical coherence tomography image processing

    Science.gov (United States)

    Yuan, Jiali; Liu, Ruihua; Xuan, Gao; Yang, Jun; Yuan, Libo

    2007-03-01

    Optical coherence tomography (OCT) is a recently developed imaging technology. By using Zeiss STRATUS OCT one could obtain clear tomography pictures of retina and macula lutea. The clinical use of image processing requires both medical knowledge and expertise in image processing techniques. This paper focused on processing of retina OCT image to design the automatic retina OCT image identification system that could help us evaluate retina, examine and clinically diagnose the fundus diseases. The motivation of our work is to extract the contour and highlight the feature area of the focus clearly and exactly. Generally it is related to image segmentation, enhancement and binarization etc. In the paper we try to reduce the image noise and make the symbolic area connected through color segmentation, low-pass filter and mathematical morphology algorithm etc., finally discern some common and different properties of postprocessing image compared with the real OCT image. Experiments were done on cystoid macular edema, macular hole and normal retina OCT image. The results show that the project raised is feasible and suitable for further image identification and classification according to ophthalmology criteria.

  13. Fluorescence-enhanced optical tomography using phase information

    Science.gov (United States)

    Lu, Yujie; Sevick-Muraca, Eva M.

    2011-02-01

    Fluorescence-enhanced optical imaging/tomography (FEOI/FEOT) could play an important role in drug discovery and clinical diagnostics. In recent years, improvement in spatial resolution and quantitative biological information has been increasingly promised. Time- and frequency-resolved FEOT has great potential to obtain improved reconstruction information compared with continuous wave (CW) mode due to the acquisition of more measurement information. In this paper, a phase-only FEOT(PO-FEOT) is proposed and evaluated. In PO-FEOT, a finite element-based linear relationship between the unknown fluorophore variables and phase information obtained from time- and frequency-domain boundary measurements is used in FEOT reconstruction. Synthetic data shows that, compared to the amplitude and phase-based reconstruction, the reconstruction time cost is remarkably reduced when phase is used alone. The reconstructed results show that PO-FEOT with high frequency information can acquire preferable reconstruction quality.

  14. Spectralis optical coherence tomography findings in Welder?s maculopathy

    Directory of Open Access Journals (Sweden)

    Aniruddha Mahindrakar

    2013-01-01

    Full Text Available Welder?s maculopathy is a form of photochemical damage to the retina and is typically characterized by involvement of the outer retinal layers. Spectral domain optical coherence tomography (SD-OCT imaging was performed in three eyes of two patients with clinical findings suggestive of Welder?s maculopathy in occupational welders. A faceted foveal lesion characterized clinical examination and the SD-OCT line scans images showed a distinct discontinuity of the photoreceptor inner and outer segment (IS/OS junction. The external limiting membrane (ELM and the retinal pigment epithelial (RPE layer remained intact at the site of IS/OS defect. SD-OCT imaging offers a noninvasive way of evaluating the microstructural changes at the fovea in Welder?s maculopathy.

  15. Clinical applications of anterior segment optical coherence tomography.

    Science.gov (United States)

    Lim, Su-Ho

    2015-01-01

    Anterior segment optical coherence tomography (AS-OCT) was recently developed and has become a crucial tool in clinical practice. AS-OCT is a noncontact imaging device that provides the detailed structure of the anterior part of the eyes. In this review, the author will discuss the various clinical applications of AS-OCT, such as the normal findings, tear meniscus measurement, ocular surface disease (e.g., pterygium, pinguecula, and scleromalacia), architectural analysis after cataract surgery, post-LASIK keratectasia, Descemet's membrane detachment, evaluation of corneal graft after keratoplasty, corneal deposits (corneal dystrophies and corneal verticillata), keratitis, anterior segment tumors, and glaucoma evaluation (angle assessment, morphological analysis of the filtering bleb after trabeculectomy, or glaucoma drainage device implantation surgery). The author also presents some interesting cases demonstrated via AS-OCT. PMID:25821589

  16. Statistical analysis of motion contrast in optical coherence tomography angiography

    CERN Document Server

    Cheng, Yuxuan; Pan, Cong; Lu, Tongtong; Hong, Tianyu; Ding, Zhihua; Li, Peng

    2015-01-01

    Optical coherence tomography angiography (Angio-OCT), mainly based on the temporal dynamics of OCT scattering signals, has found a range of potential applications in clinical and scientific researches. In this work, based on the model of random phasor sums, temporal statistics of the complex-valued OCT signals are mathematically described. Statistical distributions of the amplitude differential (AD) and complex differential (CD) Angio-OCT signals are derived. The theories are validated through the flow phantom and live animal experiments. Using the model developed in this work, the origin of the motion contrast in Angio-OCT is mathematically explained, and the implications in the improvement of motion contrast are further discussed, including threshold determination and its residual classification error, averaging method, and scanning protocol. The proposed mathematical model of Angio-OCT signals can aid in the optimal design of the system and associated algorithms.

  17. Optical coherence tomography for vulnerability assessment of sandstone.

    Science.gov (United States)

    Bemand, Elizabeth; Liang, Haida

    2013-05-10

    Sandstone is an important cultural heritage material, in both architectural and natural settings, such as neolithic rock art panels. The majority of deterioration effects in porous materials such as sandstone are influenced by the presence and movement of water through the material. The presence of water within the porous network of a material results in changes in the optical coherence tomography signal intensity that can be used to monitor the wetting front of water penetration of dry porous materials at various depths. The technique is able to detect wetting front velocities from 1 cm s(-1) to 10(-6) cm s(-1), covering the full range of hydraulic conductivities likely to occur in natural sandstones from pervious to impervious. PMID:23669855

  18. Implementation of an Optical Coherence Tomography system for painting characterization

    International Nuclear Information System (INIS)

    Optical Coherence Tomography (OCT) is a new but well established imaging technique for medical diagnosis, which can produce two- or three-dimensional images of bio-tissues with a few ?m spatial resolution. Its potential as a non-invasive tool for art conservation of paintings and other objects has been realized recently. In this work, we report the implementation of two OCT systems applied to painting characterization. One system operates in the so-called spectral domain, with a central wavelength of 840 nm and axial resolution of 10 ?m. The second system has its central wavelength at 1280 nm, with spatial resolution of 20 ?m, and operates in the time domain. Both systems are independently controlled and have imaging software developed in-house using Lab View. Using both systems, a 15 years old acrylic portrait has been analyzed, where the paint layers, light and dark colors, and the cotton treads of the canvas could be identified. (Author)

  19. Evaluation of microfluidic channels with optical coherence tomography

    KAUST Repository

    Czajkowski, J.

    2010-06-25

    Application of time domain, ultra high resolution optical coherence tomography (UHR-OCT) in evaluation of microfluidic channels is demonstrated. Presented study was done using experimental UHR-OCT device based on a Kerr-lens mode locked Ti:sapphire femtosecond laser, a photonic crystal fibre and modified, free-space Michelson interferometer. To show potential of the technique, microfluidic chip fabricated by VTT Center for Printed Intelligence (Oulu, Finland) was measured. Ability for full volumetric reconstruction in non-contact manner enabled complete characterization of closed entity of a microfluidic channel without contamination and harm for the sample. Measurement, occurring problems, and methods of postprocessing for raw data are described. Results present completely resolved physical structure of the channel, its spatial dimensions, draft angles and evaluation of lamination quality.

  20. Statistical analysis of motion contrast in optical coherence tomography angiography

    Science.gov (United States)

    Cheng, Yuxuan; Guo, Li; Pan, Cong; Lu, Tongtong; Hong, Tianyu; Ding, Zhihua; Li, Peng

    2015-11-01

    Optical coherence tomography angiography (Angio-OCT), mainly based on the temporal dynamics of OCT scattering signals, has found a range of potential applications in clinical and scientific research. Based on the model of random phasor sums, temporal statistics of the complex-valued OCT signals are mathematically described. Statistical distributions of the amplitude differential and complex differential Angio-OCT signals are derived. The theories are validated through the flow phantom and live animal experiments. Using the model developed, the origin of the motion contrast in Angio-OCT is mathematically explained, and the implications in the improvement of motion contrast are further discussed, including threshold determination and its residual classification error, averaging method, and scanning protocol. The proposed mathematical model of Angio-OCT signals can aid in the optimal design of the system and associated algorithms.

  1. Evaluation of microfluidic channels with optical coherence tomography

    Science.gov (United States)

    Czajkowski, J.; Prykäri, T.; Alarousu, E.; Lauri, J.; Myllylä, R.

    2010-11-01

    Application of time domain, ultra high resolution optical coherence tomography (UHR-OCT) in evaluation of microfluidic channels is demonstrated. Presented study was done using experimental UHR-OCT device based on a Kerr-lens mode locked Ti:sapphire femtosecond laser, a photonic crystal fibre and modified, free-space Michelson interferometer. To show potential of the technique, microfluidic chip fabricated by VTT Center for Printed Intelligence (Oulu, Finland) was measured. Ability for full volumetric reconstruction in non-contact manner enabled complete characterization of closed entity of a microfluidic channel without contamination and harm for the sample. Measurement, occurring problems, and methods of postprocessing for raw data are described. Results present completely resolved physical structure of the channel, its spatial dimensions, draft angles and evaluation of lamination quality.

  2. Optical coherence tomography of the epidermal sulfakrilate surface strippings

    Directory of Open Access Journals (Sweden)

    Utz S.R.

    2013-09-01

    Full Text Available Method of the epidermal surface biopsy (ESB with the adhesive compositions is the alter-native to the classic his-tological examination. Materials and Methods. In this study medical adhesive "Sulfacrylate" was used, small portions of which had been spread on an object glass, and then on different skin areas. To study the structural organization of the samples ESB the technique of optical coherence tomography (??? was used. Results. We obtained the pictures that visualize the structural organization of the different layers of the epidermis in lichen planus, hyperkeratosis, scabies and other skin diseases. Conclusion. This technique allows non-invasive measurement of high-precision structure of different layers of the epidermis, which can be useful both for research and for the practical dermatology.

  3. Optical coherence tomography of the rat cochlea: preliminary investigations

    Science.gov (United States)

    Wong, Brian J.; de Boer, Johannes F.; Park, Boris H.; Chen, Zhongping; Nelson, J. Stuart

    1999-06-01

    Optical coherence tomography (OCT) was used to image the internal structure of a rat cochlea. Immediately following sacrifice, the temporal bone of a SPrague-Dawley rat was harvested. Axial OCT cross sectional images (over regions of interest, 1 x 1 mm to 2 x 8 mm) were obtained with a spatial resolution of 10-15 ?m. The osseous borders of the lateral membranous labyrinth overlying the cochlea and the scala vestibuli, media, and tympani which were well demarcated by the modiolus, Reissner's and the basilar membranes were clearly identified. OCT can be used to image internal structures in the cochlea without violating the osseous labyrinth, and may potentially be used to diagnose inner ear pathology in vivo in both animal and human subjects.

  4. Investigation of anisotropic scattering for optical tomography in biological tissues

    International Nuclear Information System (INIS)

    Photons with wavelengths in near infrared region are used in optical tomography. Radiation transport theory should be preferred instead of diffusion theory for numerical modelling of photon migration in biological tissues, where diffusion theory is invalid. For example, diffusion theory is not sufficient in the regions of close to boundaries, sources or sinks and highly absorbing or void-like media. Also anisotropic scattering must be considered in the numerical models since scattering is generally highly anisotropic in biological tissues. In addition to the absorption and scattering coefficients, a suitable phase function must be known in anisotropic scattering study. Here we have compared scattering phase functions for anisotropy. Then we have calculated Legendre moments which are necessary for the implementation of anisotropy factors into the transport code, PARTISN. Discrete ordinates method (SN) has been used in the transport calculations. We have obtained solutions first a homogeneous and then heterogeneous medium.

  5. Image features of punctate inner choroiditis on optical coherence tomography

    Directory of Open Access Journals (Sweden)

    Hao Zhang

    2014-05-01

    Full Text Available AIM: To observe the image features of punctate inner choroiditis(PICat different stages by optical coherence tomography(OCT. METHODS: A retrospective analysis was performed on 24 PIC patients(33 eyeswith the median age of 29 years old(range: 16-47, where 19 cases were female(79.2%. Among the 24 cases, 9 cases were bilateral onset(37.5%and 19 cases were with myopia(79.2%. All of the patients were given fundus fluorescein angiography(FFAand optical coherence tomography(OCT. Through OCT, patients with PIC at different stages were observed for morphology of outer plexiform layer(OPLand outer nuclear layer(ONL, integrity of inside and outside connections of visual cells(IS/OS, integrity and morphology of reflective tape on retinal pigment epithelium(RPE, and light reflection intensity of choroid and sclera. RESULTS: The results showed that during active stage and atrophic stage of PIC, there were excavation of ONL and OPL towards thechoroid, weakened or partially disappeared reflective tape of IS/OS, interrupted or fuzzy reflective tape of RPE, hillock-like protrusion of RPE towards the ONL or ONL with medium to high reflection, and strengthened reflection of choroid and sclera under the lesion partly. The rates of the above performances in active stage were 9.1%, 100%, 100%, 86.4% and 77.3%, respectively, and in recovery stage, the corresponding rates were 81.8%, 90.1%, 81.8%, 45.5%, and 90.1%. Medium to high reflection of the protrusion under ONL was more commonly seen in active stage, with PPCONCLUSION: There are both common points and differences of OCT features in PIC at active stage and atrophic stage, suggesting the injury and repair pathological process of outer neural epithelium, retinal pigment epithelium and innerchoroid inflammatory.

  6. Optical coherence tomography of the pulmonary arteries: A systematic review.

    Science.gov (United States)

    Jorge, Elisabete; Baptista, Rui; Calisto, João; Faria, Henrique; Monteiro, Pedro; Pan, Manuel; Pêgo, Mariano

    2016-01-01

    Optical coherence tomography (OCT) is an imaging technique extensively used for visualizing the coronary circulation, where it assists clinical decision-making. Along with the new interventional procedures being introduced for pulmonary vascular disease, there is an increasing need for intravascular imaging of the pulmonary arteries. Additionally, measurements of the wall thickness of the pulmonary arteries of patients with various types of pulmonary hypertension (PH) may provide relevant diagnostic and prognostic information. The aim of this review is to summarize all the available evidence on the use of OCT for imaging the pulmonary bed and to describe a simple protocol for OCT image acquisition. We conducted a systematic review of the literature using electronic reference databases through February 2015 (MEDLINE, Cochrane Library, Web of Knowledge, and references cited in other studies) and the search terms "optical coherence tomography," "pulmonary hypertension," and "pulmonary arteries." Studies in which OCT was used to image the pulmonary vessels were considered for inclusion. We identified 14 studies reporting OCT imaging data from the pulmonary arteries. OCT was able to identify intravascular thrombi in patients with chronic thromboembolic PH (CTEPH), and an increase in vessel wall thickness was found in most patients with PH, compared with the controls. OCT has also been reported to be useful for the selection of balloon size in the setting of balloon pulmonary angioplasty for CTEPH. The main limitations include lack of standardization, little data on outcomes, cost, and the technical limitations involved in visualizing small-diameter (<1mm) pulmonary vessels. OCT has become a potential tool for the in vivo study of vascular changes in the pulmonary arteries, and may provide additional information in the assessment of patients with PH. Prospective high-quality studies assessing the safety, validity, and clinical impact of OCT imaging for pulmonary vessels are warranted. PMID:26572955

  7. Optical coherence tomography: Monte Carlo simulation and improvement by optical amplification

    DEFF Research Database (Denmark)

    Tycho, Andreas

    2002-01-01

    An advanced novel Monte Carlo simulation model of the detection process of an optical coherence tomography (OCT) system is presented. For the first time it is shown analytically that the applicability of the incoherent Monte Carlo approach to model the heterodyne detection process of an OCT system is firmly justified. This is obtained by calculating the heterodyne mixing of the reference and sample beams in a plane conjugate to the discontinuity in the sample probed by the system. Using this app...

  8. Determination of optical scattering properties of highly-scattering media in optical coherence tomography images

    DEFF Research Database (Denmark)

    Levitz, D.; Thrane, L.; Frosz, Michael Henoch; Andersen, Peter E.; Andersen, C.B.; Andersson-Engels, S.; Valanciunaite, J.; Swartling, J.; Hansen, P.R.

    2004-01-01

    We developed a new algorithm that fits optical coherence tomography (OCT) signals as a function of depth to a general theoretical OCT model which takes into account multiple scattering effects. With use of this algorithm, it was possible to extract both the scattering coefficient and anisotropy factor from a particular region of interest in an OCT image. The extraction algorithm was evaluated against measurements from an integrating sphere on a set of tissue phantoms and yielded valid results. F...

  9. Construction of the Optical Delay Line for the Optical Coherence Tomography

    Directory of Open Access Journals (Sweden)

    Kitsakorn Locharoenrat

    2013-03-01

    Full Text Available We have constructed the compact optical delay line for the axial scanning of time-domain optical coherence tomography. The delay line contains the retro-reflector, and the inclined reflection mirror, as well as the scanning mirror. This delay line is performed by the low-coherence reflectometer with a scanning speed of 400 Hz. The dimension of the delay line is 2 cm × 2 cm. We have achieved the scanning range of about 3 mm within the scanning mirror’s vibration angle of approximately 10°

  10. Smart pixels for real-time optical coherence tomography

    Science.gov (United States)

    Beer, Stephan; Zeller, Philipp; Blanc, Nicolas; Lustenberger, Felix; Seitz, Peter

    2004-04-01

    Optical Coherence Tomography (OCT) is an optical imaging technique allowing the acquisition of three-dimensional images with micrometer resolution. It is very well suited to cross-sectional imaging of highly scattering materials, such as most biomedical tissues. A novel custom image sensor based on smart pixels dedicated to parallel OCT (pOCT) is presented. Massively parallel detection and signal processing enables a significant increase in the 3D frame rate and a reduction of the mechanical complexity of the complete setup compared to conventional point-scanning OCT. This renders the parallel OCT technique particularly advantageous for high-speed applications in industrial and biomedical domains while also reducing overall system costs. The sensor architecture presented in this article overcomes the main challenges for OCT using parallel detection such as data rate, power consumption, circuit size, and optical sensitivity. Each pixel of the pOCT sensor contains a low-power signal demodulation circuit allowing the simultaneous detection of the envelope and the phase information of the optical interferometry signal. An automatic photocurrent offset-compensation circuit, a synchronous sampling stage, programmable time averaging, and random pixel accessing are also incorporated at the pixel level. The low-power demodulation principle chosen as well as alternative implementations are discussed. The characterization results of the sensor exhibit a sensitivity of at least 74 dB, which is within 4 dB of the theoretical limit of a shot-noise limited OCT system. Real-time high-resolution three-dimensional tomographic imaging is demonstrated along with corresponding performance measurements.

  11. Donor disc attachment assessment with intraoperative spectral optical coherence tomography during descemet stripping automated endothelial keratoplasty

    Directory of Open Access Journals (Sweden)

    Edward Wylegala

    2013-01-01

    Full Text Available Optical coherence tomography has already been proven to be useful for pre- and post-surgical anterior eye segment assessment, especially in lamellar keratoplasty procedures. There is no evidence for intraoperative usefulness of optical coherence tomography (OCT. We present a case report of the intraoperative donor disc attachment assessment with spectral-domain optical coherence tomography in case of Descemet stripping automated endothelial keratoplasty (DSAEK surgery combined with corneal incisions. The effectiveness of the performed corneal stab incisions was visualized directly by OCT scan analysis. OCT assisted DSAEK allows the assessment of the accuracy of the Descemet stripping and donor disc attachment.

  12. Complex conjugate artifact-free adaptive optics optical coherence tomography of in vivo human optic nerve head

    OpenAIRE

    Kim, Dae Yu; Werner, John S.; Zawadzki, Robert J.

    2012-01-01

    We acquired in vivo images of the human optic nerve head (ONH) using an adaptive optics—optical coherence tomography (AO-OCT) system. In order to improve imaging of the lamina cribrosa in the ONH with high lateral resolution and sensitivity, we implemented a complex conjugate artifact-free Fourier domain OCT (Fd-OCT) acquisition scheme with a reference arm-based phase shifting method. This allowed positioning of the lamina cribrosa structures near the zero path length difference where AO-OCT ...

  13. Monte Carlo Investigation of Optical Coherence Tomography Retinal Oximetry.

    Science.gov (United States)

    Chen, Siyu; Yi, Ji; Liu, Wenzhong; Backman, Vadim; Zhang, Hao F

    2015-09-01

    Optical coherence tomography (OCT) oximetry explores the possibility to measure retinal hemoglobin oxygen saturation level (sO2). We investigated the accuracy of OCT retinal oximetry using Monte Carlo simulation in a commonly used four-layer retinal model. After we determined the appropriate number of simulated photon packets, we studied the effects of blood vessel diameter, signal sampling position, physiological sO2 level, and the blood packing factor on the accuracy of sO2 estimation in OCT retinal oximetry. The simulation results showed that a packing factor between 0.2 and 0.4 yields a reasonably accurate estimation of sO2 within a 5% error tolerance, which is independent of vessel diameter and sampling position, when visible-light illumination is used in OCT. We further explored the optimal optical spectral range for OCT retinal oximetry. The simulation results suggest that visible spectral range around 560 nm is better suited than near-infrared spectral range around 800 nm for OCT oximetry to warrant accurate measurements. PMID:25955984

  14. Depth Compensated Spectral Domain Optical Coherence Tomography via Digital Compensation

    CERN Document Server

    Boroomand, Ameneh; Shafiee, Mohammad Javad; Bizheva, Kostadinka; Wong, Alexander

    2015-01-01

    Spectral Domain Optical Coherence Tomography (SD-OCT) is a well-known imaging modality which allows for \\textit{in-vivo} visualization of the morphology of different biological tissues at cellular level resolutions. The overall SD-OCT imaging quality in terms of axial resolution and Signal-to-Noise Ratio (SNR) degrades with imaging depth, while the lateral resolution degrades with distance from the focal plane. This image quality degradation is due both to the design of the SD-OCT imaging system and the optical properties of the imaged object. Here, we present a novel Depth Compensated SD-OCT (DC-OCT) system that integrates a Depth Compensating Digital Signal Processing (DC-DSP) module to improve the overall imaging quality via digital compensation. The designed DC-DSP module can be integrated to any SD-OCT system and is able to simultaneously compensate for the depth-dependent loss of axial and lateral resolutions, depth-varying SNR, as well as sidelobe artifact for improved imaging quality. The integrated D...

  15. Polarization-sensitive optical coherence tomography with decorrelated channels

    Science.gov (United States)

    Zaatari, Haitham N.; Kemp, Nate J.; Akkin, Taner; Rylander, Henry G., III; Milner, Thomas E.

    2004-07-01

    We describe a Polarization Sensitive Optical Coherence Tomography (PS-OCT) system with de-correlated horizontal and vertical channels. Construction of PS-OCT depth-resolved images is achieved with a scanning bulk Michelson interferometer and a broadband TiAl2O3 femtosecond laser source. We de-correlate and delay horizontal and vertical channels using a birefringent crystal in the source path and calcite prism pairs in the sample and reference paths. Cross-correlation and phase changes between horizontal and vertical channels are measured at different reference-sample optical delays in correlated and de-correlated PS-OCT. PS-OCT with de-correlated (DPS-OCT) channels can broaden applications to include de-correlated Doppler imaging of blood flow and imaging the retinal nerve fiber layer with delayed channels. We achieve a differential delay of 0-400 microns between vertical and horizontal channels by translating the calcite prisms. DPS-OCT system design and experimental measurements are presented and discussed.

  16. Morphological phenotyping of mouse hearts using optical coherence tomography

    Science.gov (United States)

    Cua, Michelle; Lin, Eric; Lee, Ling; Sheng, Xiaoye; Wong, Kevin S. K.; Tibbits, Glen F.; Beg, Mirza Faisal; Sarunic, Marinko V.

    2014-11-01

    Transgenic mouse models have been instrumental in the elucidation of the molecular mechanisms behind many genetically based cardiovascular diseases such as Marfan syndrome (MFS). However, the characterization of their cardiac morphology has been hampered by the small size of the mouse heart. In this report, we adapted optical coherence tomography (OCT) for imaging fixed adult mouse hearts, and applied tools from computational anatomy to perform morphometric analyses. The hearts were first optically cleared and imaged from multiple perspectives. The acquired volumes were then corrected for refractive distortions, and registered and stitched together to form a single, high-resolution OCT volume of the whole heart. From this volume, various structures such as the valves and myofibril bundles were visualized. The volumetric nature of our dataset also allowed parameters such as wall thickness, ventricular wall masses, and luminal volumes to be extracted. Finally, we applied the entire acquisition and processing pipeline in a preliminary study comparing the cardiac morphology of wild-type mice and a transgenic mouse model of MFS.

  17. Optical coherence tomography: imaging architect for dermal microdialysis in psoriasis

    Science.gov (United States)

    O'Connell, M.-L.; O'Connor, W.; Ramsay, B.; Guihen, E.; Ho, W. L.; Leahy, M. J.

    2011-03-01

    Optical coherence tomography (OCT) has been used as part of a ground breaking translational study to shed some light on one of the worlds most prevalent autoimmune diseases; psoriasis. The work successfully integrates the fields of optical imaging, biochemistry and dermatology in conducting a dermal microdialysis (DMD) trial for quantitative histamine assessment amongst a group of psoriasis sufferers. The DMD process involves temporary insertion of microscopic hollow tubes into a layer of skin to measure the levels of histamine and other important biological molecules in psoriasis. For comparison purposes, DMD catheters were implanted into healthy, peri-lesional and lesional skin regions. The catheters' entry and exit points and their precise locations in the epidermal layer of the skin were confirmed using OCT thus obtaining high resolution, wide-field images of the affected skin as well as catheter placement whilst local microdialysis enabled a tissue chemistry profile to be obtained from these three skin regions including histamine, a local immune system activator known to contribute towards itch and inflammation. Together these tools offer a synergistic approach in the clinical assessment of the disease. In addition, OCT delivered a non-invasive and rapid method for analyzing the affected skin architecture.

  18. Extended hierarchical Bayesian diffuse optical tomography for removing scalp artifact.

    Science.gov (United States)

    Shimokawa, Takeaki; Kosaka, Takashi; Yamashita, Okito; Hiroe, Nobuo; Amita, Takashi; Inoue, Yoshihiro; Sato, Masa-Aki

    2013-01-01

    Functional near-infrared spectroscopy (fNIRS) can non-invasively measure hemodynamic responses in the cerebral cortex with a portable apparatus. However, the observation signal in fNIRS measurements is contaminated by the artifact signal from the hemodynamic response in the scalp. In this paper, we propose a method to separate the signals from the cortex and the scalp by estimating both hemodynamic changes by diffuse optical tomography (DOT). In the inverse problem of DOT, we introduce smooth regularization to the hemodynamic change in the scalp and sparse regularization to that in the cortex based on the nature of the hemodynamic responses. These appropriate regularization models, with the spatial information of optical paths of many measurement channels, allow three-dimensional reconstruction of both hemodynamic changes. We validate our proposed method through two-layer phantom experiments and MRI-based head-model simulations. In both experiments, the proposed method simultaneously estimates the superficial smooth activity in the scalp area and the deep localized activity in the cortical area. PMID:24298404

  19. A dual modality fluorescence confocal and optical coherence tomography microendoscope

    Science.gov (United States)

    Makhlouf, Houssine; Rouse, Andrew R.; Gmitro, Arthur F.

    2010-02-01

    We demonstrate the implementation of a Fourier domain optical coherence tomography (OCT) imaging system incorporated into the optical train of a fluorescence confocal microendoscope. The slit-scanning confocal system has been presented previously and achieves 3?m lateral resolution and 25?m axial resolution over a field of view of 430?m. Its multi-spectral mode of operation captures images with 6nm average spectral resolution. To incorporate OCT imaging, a common-path interferometer is made with a super luminescent diode and a reference coverslip located at the distal end of the fiber bundle catheter. The infrared diode spectral width allows a theoretical OCT axial resolution of 12.9?m. Light from the reference and sample combine, and a diffraction grating produces a spectral interferogram on the same 2D CCD camera used for confocal microendoscopic imaging. OCT depth information is recovered by a Fourier transform along the spectral dispersion direction. Proper operation of the system scan mirrors allows rapid switching between confocal and OCT imaging modes. The OCT extension takes advantage of the slit geometry, so that a 2D image is acquired without scanning. Combining confocal and OCT imaging modalities provides a more comprehensive view of tissue and the potential to improve disease diagnosis. A preliminary bench-top system design and imaging results are presented.

  20. Vascular wall stress during intravascular optical coherence tomography imaging

    Science.gov (United States)

    Sun, Cuiru; Yang, Victor

    2015-03-01

    Biomechanical properties of arterial wall is crucial for understanding the changes in the cardiovascular system. Catheters are used during intravascular optical coherence tomography (IVOCT) imaging. The presence of a catheter alters the flow field, pressure distribution and frictional resistance to flow in an artery. In this paper, we first study the transmural stress distribution of the catheterized vessel. COMSOL (COMSOL 4.4) was used to simulate the blood flow induced deformation in a catheterized vessel. Blood is modeled as an incompressible Newtonian fluid. Stress distribution from an three-layer vascular model with an eccentric catheter are simulated, which provides a general idea about the distribution of the displacement and the stress. Optical coherence elastography techniques were then applied to porcine carotid artery samples to look at the deformation status of the vascular wall during saline or water injection. Preliminary simulation results show nonuniform stress distribution in the circumferential direction of the eccentrically catheterized vascular model. Three strain rate methods were tested for intravascular OCE application. The tissue Doppler method has the potential to be further developed to image the vascular wall biomechnical properties in vivo. Although results in this study are not validated quantitatively, the experiments and methods may be valuable for intravascular OCE studies, which may provide important information for cardiovascular disease prevention, diagnosis and treatment.

  1. Spectral domain optical coherence tomography morphology in optic disc pit associated maculopathy

    Directory of Open Access Journals (Sweden)

    Janusz Michalewski

    2014-01-01

    Full Text Available Purpose: Our purpose was to study the clinical manifestation and course of optic pit maculopathy using Spectral Domain Optical Coherence Tomography (SD- OCT images. Materials and Methods: We used SD-OCT to examine 20 eyes of 19 patients with a macular detachment in combination with an optic. Results: We observed five different fovea appearances in regard to fluid localization. In five eyes, we recorded changes in the fluid distribution with SD-OCT. In 17/20 eyes, we noted a communication between the perineural and subretinal and/or intraretinal space at the margin of the optic disc. Conclusion: 3-dimensional SD-OCT (3D-SDOCT scans revealed a three-fold connection, between subretinal and intraretinal space, perineural space, and the vitreous cavity. Therefore, we suppose that intraretinal or subretinal fluid in optic pit maculopathy may have both a vitreous and cerebrospinal origin. A membrane, covering the optic nerve was noted in 14 cases. Even if it seems intact in some B-scans, it is not complete in others several micrometers apart. Additionally, we observed fluid accumulation below the margin of the optic disc and hyperreflective porous tissue in the optic disc excavation. Those findings do not influence the course of maculopathy.

  2. Root canal filling evaluation using optical coherence tomography

    Science.gov (United States)

    Negrutiu, Meda L.; Sinescu, Cosmin; Topala, Florin; Nica, Luminita; Ionita, Ciprian; Marcauteanu, Corina; Goguta, Luciana; Bradu, Adrian; Dobre, George; Rominu, Mihai; Podoleanu, Adrian Gh.

    2010-04-01

    Endodontic therapy consists in cleaning and shaping the root canal system, removing organic debris and sealing the intra-canal space with permanent filling materials. The purpose of this study was to evaluate various root canal fillings in order to detect material defects, the marginal adaptation at the root canal walls and to assess the quality of the apical sealing. 21 extracted single-root canal human teeth were selected for this study. We instrumented all roots using NiTi rotary instruments. All canals were enlarged with a 6% taper size 30 GT instrument, 0,5 mm from the anatomical apex. The root canals were irrigated with 5% sodium hypochlorite, followed by 17% ethylenediaminetetraacetic acid (EDTA). After the instrumentation was completed, the root canals were obturated using a thermoplasticizable polymer of polyesters. In order to assess the defects inside the filling material and the marginal fit to the root canal walls, the conebeam micro-computed tomography (CB?CT) was used first. After the CB?CT investigation, time domain optical coherence tomography working in en face mode (TDefOCT) was employed to evaluate the previous samples. The TDefOCT system was working at 1300 nm and was doubled by a confocal channel at 970 nm. The results obtained by CB?CT revealed no visible defects inside the root-canal fillings and at the interfaces with the root-canal walls. TDefOCT investigations permit to visualize a more complex stratificated structure at the interface filling material/dental hard tissue and in the apical region.

  3. High-resolution extended source optical coherence tomography.

    Science.gov (United States)

    Yu, Xiaojun; Liu, Xinyu; Chen, Si; Luo, Yuemei; Wang, Xianghong; Liu, Linbo

    2015-10-01

    High resolution optical coherence tomography (OCT) is capable of providing detailed tissue microstructures that are critical for disease diagnosis, yet its sensitivity is usually degraded since the system key components are typically not working at their respective center wavelengths. We developed a novel imaging system that achieves enhanced sensitivity without axial resolution degradation by the use of a spectrally encoded extended source (SEES) technique; it allows larger sample power without exceeding the maximum permissible exposure (MPE). In this study, we demonstrate a high-resolution extended source (HRES) OCT system, which is capable of providing a transverse resolution of 4.4 µm and an axial resolution of 2.1 µm in air with the SEES technique. We first theoretically show a sensitivity advantage of 6-dB of the HRES-OCT over that of its point source counterpart using numerical simulations, and then experimentally validate the applicability of the SEES technique to high-resolution OCT (HR-OCT) by comparing the HRES-OCT with an equivalent point-source system. In the HRES-OCT system, a dispersive prism was placed in the infinity space of the sample arm optics to spectrally extend the visual angle (angular subtense) of the light source to 10.3 mrad. This extended source allowed ~4 times larger MPE than its point source counterpart, which results in an enhancement of ~6 dB in sensitivity. Specifically, to solve the unbalanced dispersion between the sample and the reference arm optics, we proposed easy and efficient methods for system calibration and dispersion correction, respectively. With a maximum scanning speed reaching up to 60K A-lines/s, we further conducted imaging experiments with HRES-OCT using the human fingertip in vivo and the swine eye tissues ex vivo. Results demonstrate that the HRES-OCT is able to achieve significantly larger penetration depth than its conventional point source OCT counterpart. PMID:26480153

  4. Preperimetric glaucoma diagnosis by confocal scanning laser tomography of the optic disc

    OpenAIRE

    Mardin, C; Horn, F.; Jonas, J.; Budde, W.

    1999-01-01

    AIM—To evaluate the ability of confocal scanning laser tomography of the optic nerve head to detect glaucomatous optic nerve damage in ocular hypertensive eyes without visual field defects.?METHODS—The study included 50 normal subjects, 61 glaucoma patients with glaucomatous changes in the optic disc and visual field, and 102 "preperimetric" patients with increased intraocular pressure, normal visual fields, and glaucomatous appearance of the optic disc as evaluated on colour stereo optic dis...

  5. Cystoid macular edema diagnosed with optical coherent tomography in patients operated on from cataract

    International Nuclear Information System (INIS)

    Refers frequency of cystoid macular edema diagnosed with optical coherence tomography in patients operated on from senile cataract at 'Ramon Pando Ferrer' Cuban Institute of Ophthalmology in the period from December 2006 to February 2007

  6. Compact MEMS-based Adaptive Optics Optical Coherence Tomography for Clinical Use

    Energy Technology Data Exchange (ETDEWEB)

    Chen, D; Olivier, S; Jones, S; Zawadzki, R; Evans, J; Choi, S; Werner, J

    2008-02-04

    We describe a compact MEMS-based adaptive optics (AO) optical coherence tomography system with improved AO performance and ease of clinical use. A typical AO system consists of a Shack-Hartmann wavefront sensor and a deformable mirror that measures and corrects the ocular and system aberrations. Because of the limitation on the current deformable mirror technologies, the amount of real-time ocular-aberration compensation is restricted and small in the previous AO-OCT instruments. In this instrument, we proposed to add an optical apparatus to correct the spectacle aberrations of the patients such as myopia, hyperopia and astigmatism. This eliminated the tedious process of the trial lenses in clinical imaging. Different amount of spectacle aberration compensation was achieved by motorized stages and automated with the AO computer for ease of clinical use. In addition, the compact AO-OCT was optimized to have minimum system aberrations to reduce AO registration errors and improve AO performance.

  7. Development of an electro-optically tuned optical coherence tomography system for imaging dental lesions.

    Science.gov (United States)

    Damodaran, Vani; Vasa, Nilesh J

    2014-01-01

    A conventional optical coherence tomography (OCT) system was set up in-house to image early dental caries, identify gap formation in the bonding interface for restoration and secondary caries. Two-dimensional images of tooth samples was obtained and dental defect were identified. A novel electro-optic tuning system is proposed in order to improve scanning speed and to perform noiseless imaging. Preliminary studies were conducted with two crystals namely, LiNbO3 (Lithium Niobate) and KTP (Potassium Titanyl Phosphate) using a SLED source for OCT system and the simulated and experimental results were found to be qualitatively similar. The tuning range for LiNbO3 and KTP was found to be in the order of few micrometers whereas KTN (Potassium Tantalate Niobate) using the quadratic electro-optic effect is expected to show scanning range of tens of micrometers. KTN based hybrid scanning for dental caries imaging is also planned. PMID:25569924

  8. Clinical manifestations of optic pit maculopathy as demonstrated by spectral domain optical coherence tomography

    Directory of Open Access Journals (Sweden)

    Tzu JH

    2013-01-01

    Full Text Available Jonathan H Tzu, Harry W Flynn Jr, Audina M Berrocal, William E Smiddy, Timothy G Murray, Yale L FisherDepartment of Ophthalmology, Bascom Palmer Eye Institute, University of Miami Miller School of Medicine, Miami, FL, USAPurpose: The purpose of this retrospective study was to evaluate the characteristic features, including spectral-domain optical coherence tomography (SD-OCT, clinical course, and outcome of treatment if given for patients with optic disc pit maculopathy.Methods: We investigated a consecutive series of patients with a diagnosis of optic pit maculopathy treated between 2001 and 2012 at the Bascom Palmer Eye Institute. Patients were divided into two main groups, ie, patients who were observed without surgery and patients who received surgical intervention. The main outcome measures were presenting and final visual acuity, and changes in SD-OCT imaging were recorded. Other data including age, gender, eye, age of onset, length of follow-up, location of optic pit, and location of fluid by OCT were also recorded.Results: On OCT, 67% (12/18 of the eyes showed schisis-like cavities, 22% (4/18 had only subretinal fluid, and 17% (3/18 had only a schisis-like cavity without subretinal fluid. In the patients managed by observation, visual acuity was ?20/200 in 6/8 eyes initially and 6/8 eyes at last follow-up. Ten of 18 patients received either focal laser, surgery or both. Six of 10 eyes undergoing surgery had initial visual acuity ? 20/200, and 8 of 10 eyes undergoing surgery had a visual acuity of ?20/200 at last follow-up.Conclusion: In this study, many eyes were observed and remained stable during follow-up. In eyes with reduced vision, surgical intervention produced variable outcomes, and persistent intraretinal/subretinal fluid was a common occurrence.Keywords: optic pit maculopathy, spectral-domain optical coherence tomography

  9. CHOROIDAL THICKNESS IN PATIENTS WITH DIABETIC RETINOPATHY ANALYZED BY SPECTRAL-DOMAIN OPTICAL COHERENCE TOMOGRAPHY

    OpenAIRE

    Regatieri, Caio V.; Branchini, Lauren; CARMODY, JILL; Fujimoto, James G.; Duker, Jay S

    2012-01-01

    Purpose: This study was designed to examine choroidal thickness in patients with diabetes using spectral-domain optical coherence tomography. Methods: Forty-nine patients (49 eyes) with diabetes and 24 age-matched normal subjects underwent high-definition raster scanning using spectral-domain optical coherence tomography with frame enhancement software. Patients with diabetes were classified into 3 groups: 11 patients with mild or moderate nonproliferative diabetic retinopathy and no macul...

  10. Magnetic induction tomography using an all-optical $^{87}$Rb atomic magnetometer

    CERN Document Server

    Wickenbrock, Arne; Dow, Albert; Marmugi, Luca; Renzoni, Ferruccio

    2014-01-01

    We demonstrate Magnetic Induction Tomography (MIT) with an all-optical atomic magnetometer. Our instrument creates a conductivity map of conductive objects. Both shape and size of the imaged samples compare very well with the actual shape and size. Given the potential of all-optical atomic magnetometers for miniaturization and extreme sensitivity, the proof-of-principle presented here opens up promising avenues in the development of instrumentation for magnetic induction tomography.

  11. The use of optical coherence tomography in maxillofacial surgery

    Science.gov (United States)

    Al-Obaidi, Mohammed; Tandon, Rahul; Tiwana, Paul

    2015-02-01

    The ever-evolving medical field continues to trend toward less invasive approaches to the diagnosis and treatment of pathological conditions. Basic sciences research has allowed for improved technologies that are translated to the clinical sciences. Similarly, advancements in imaging modalities continue to improve and their applications become more varied. As such, surgeons and pathologists are able to depend on smaller samples for tissue diagnosis of pathological disease, where once large sections of tissue were needed. Optical coherence tomography (OCT), a high-resolution imaging technique, has been used extensively in different medical fields to improve diagnostic yield. Its use in dental fields, particularly in oral and maxillofacial surgery, remains limited. Our goal is to assess the use of OCT for improving soft tissue analysis and diagnosis, particularly for its applications in the field of oral and maxillofacial surgery. Optical coherence tomography is a modality that uses an optical signal using safe near-infrared light which is reflected off the sub-surface structures. This allows for high-resolution cross-sectional images of the tissue morphology to be obtained. Ophthalmologists have been using OCT to obtain images of the retina to assess for age-related macular degeneration. More recently, OCT has been used by Interventional Cardiology to image coronary arteries, and assess plaque thickness and morphology. This technology is now being investigated in several medical fields as a form of optical biopsy, providing in situ images with high-resolution morphology of tissues. We are particularly interested in its use on epithelial tissues, and therefore performed a literature review on the use of OCT for assessing epithelium. Evaluation of histologically-diagnosed actinic keratosis, for example, was found to correlate well with the imaging discrepancies found on OCT; and the in vivo assessment of atypical keratinocytes was firmly established. Additionally, studies have shown a potential application in that OCT may provide a method for studying the evolution of epithelial lesions OCT's potential in producing high-resolution images of tissue morphology can prove to be a valuable tool for characterizing different soft tissue pathological disorders. Furthermore, it has been shown to measure changes in light intensity at tissue-fluid interfaces, which can provide surgeons the ability to characterize oral mucosal surfaces noninvasively. OCT can also prove to be valuable in detecting oral cancerous and pre-cancerous lesions, as altered epithelium containing increased dysplasia shows differences in light scattering than normal epithelium. Additionally, OCT has been shown to analyze deeper collagen tissues of the oral mucosa and is not limited to the surface epithelium. This can aid in characterizing such inflammatory conditions that alter these tissues. Several tissue samples from the maxillofacial region were obtained and assessed using an OCT device at our institution. The analysis has shown high-resolution images of soft tissue-bone interface, titanium implant-bone interface, and other anatomical sites within the oral cavity. OCT has been shown to be a valuable modality in different medical fields. Its use in oral and maxillofacial surgery can potentially aid in diagnostic techniques. Alongside traditional histological technique, it can be help characterize tissues at the cellular level, which would improve costs, time, and most importantly, patient care. We aim to introduce OCT and its diagnostic abilities to the field of oral and maxillofacial surgery to help aid clinicians and provide improved care for patients.

  12. Imaging of collagen deposition disorders using optical coherence tomography

    DEFF Research Database (Denmark)

    Ring, H C; Mogensen, M

    2015-01-01

    BACKGROUND: Collagen deposition disorders such as hypertrophic scars, keloids and scleroderma can be associated with significant stigma and embarrassment. These disorders often constitute considerable impairment to quality of life, with treatment posing to be a substantial challenge. Optical coherence tomography (OCT) provides a non-invasive, easily applicable bedside optical imaging method for assessment of the skin. It is hypothesized that OCT imaging may be useful in assessing fibrosis to avoid additional biopsies that could potentially worsen the scarring. METHOD: Thirty-three patients with ordinary scars, hypertrophic scars, keloid scarring, lichen sclerosus et atrophicus and localized or systemic scleroderma were recruited for this pilot study. Affected tissue and adjacent healthy skin were scanned using OCT and digitally photographed. Density measurements were performed in ImageJ on OCT images from scleroderma patients, both systemic and morphea (10 patients), keloid patients (10 patients) and healthyskin adjacent to keloids (10 patients). RESULTS: OCT images of scarring diseases showed varying degrees of disruption to the skin architecture. OCT characteristics were identified for each lesion type. Hypertrophic scars displayed an increased vascularity and signal-rich bands correlating to excessive collagen deposition. Keloids depicted a disarray of hyper-reflective areas primarily located in the upper dermis. Additionally, the dermis displayed a heterogeneous morphology without indications of any vascular supply or lymphatic network. In contrast to keloids, scleroderma displayed a more cohesive backscattering indicating a difference in density of collagen or other dermal structures. OCT images demonstrated no significant differences between mean density measurements in OCT images of scleroderma, keloid and healthy skin (P = 0.07). CONCLUSION: The OCT imaging appears to identify different scarring mechanisms, and therefore be of potential use in the assessment of outcomes following non-invasive therapy of e.g. early or progressive lesions.

  13. Integral ceramic superstructure evaluation using time domain optical coherence tomography

    Science.gov (United States)

    Sinescu, Cosmin; Bradu, Adrian; Topala, Florin I.; Negrutiu, Meda Lavinia; Duma, Virgil-Florin; Podoleanu, Adrian G.

    2014-02-01

    Optical Coherence Tomography (OCT) is a non-invasive low coherence interferometry technique that includes several technologies (and the corresponding devices and components), such as illumination and detection, interferometry, scanning, adaptive optics, microscopy and endoscopy. From its large area of applications, we consider in this paper a critical aspect in dentistry - to be investigated with a Time Domain (TD) OCT system. The clinical situation of an edentulous mandible is considered; it can be solved by inserting 2 to 6 implants. On these implants a mesostructure will be manufactured and on it a superstructure is needed. This superstructure can be integral ceramic; in this case materials defects could be trapped inside the ceramic layers and those defects could lead to fractures of the entire superstructure. In this paper we demonstrate that a TD-OCT imaging system has the potential to properly evaluate the presence of the defects inside the ceramic layers and those defects can be fixed before inserting the prosthesis inside the oral cavity. Three integral ceramic superstructures were developed by using a CAD/CAM technology. After the milling, the ceramic layers were applied on the core. All the three samples were evaluated by a TD-OCT system working at 1300 nm. For two of the superstructures evaluated, no defects were found in the most stressed areas. The third superstructure presented four ceramic defects in the mentioned areas. Because of those defects the superstructure may fracture. The integral ceramic prosthesis was send back to the dental laboratory to fix the problems related to the material defects found. Thus, TD-OCT proved to be a valuable method for diagnosing the ceramic defects inside the integral ceramic superstructures in order to prevent fractures at this level.

  14. Optical coherence tomography for nondestructive evaluation of fuel rod degradation

    Energy Technology Data Exchange (ETDEWEB)

    Renshaw, Jeremy B., E-mail: jrenshaw@epri.com [Electric Power Research Institute, 1300 West WT Harris Blvd., Charlotte, NC 28262 (United States); Jenkins, Thomas P., E-mail: tjenkins@metrolaserinc.com; Buckner, Benjamin D., E-mail: tjenkins@metrolaserinc.com [MetroLaser, Inc., 22941 Mill Creek Drive, Laguna Hills, CA 92653 (United States); Friend, Brian [AREVA, Inc., 3315 Old Forest Road, Lynchburg, VA 24501 (United States)

    2015-03-31

    Nuclear power plants regularly inspect fuel rods to ensure safe and reliable operation. Excessive corrosion can cause fuel failures which can have significant repercussions for the plant, including impacts on plant operation, worker exposure to radiation, and the plant's INPO rating. While plants typically inspect for fuel rod corrosion using eddy current techniques, these techniques have known issues with reliability in the presence of tenacious, ferromagnetic crud layers that can deposit during operation, and the nondestructive evaluation (NDE) inspection results can often be in error by a factor of 2 or 3. For this reason, alternative measurement techniques, such as Optical Coherence Tomography (OCT), have been evaluated that are not sensitive to the ferromagnetic nature of the crud. This paper demonstrates that OCT has significant potential to characterize the thickness of crud layers that can deposit on the surfaces of fuel rods during operation. Physical trials have been performed on simulated crud samples, and the resulting data show an apparent correlation between the crud layer thickness and the OCT signal.

  15. Optical coherence tomography for imaging of skin and skin diseases

    DEFF Research Database (Denmark)

    Mogensen, Mette; Thrane, Lars

    2009-01-01

    Optical coherence tomography (OCT) is an emerging imaging technology based on light reflection. It provides real-time images with up to 2-mm penetration into the skin and a resolution of approximately 10 ?m. It is routinely used in ophthalmology. The normal skin and its appendages have been studied, as have many diseases. The method can provide accurate measures of epidermal and nail changes in normal tissue. Skin cancer and other tumors, as well as inflammatory diseases, have been studied and good agreement found between OCT images and histopathological architecture. OCT also allows noninvasive monitoring of morphologic changes in skin diseases and may have a particular role in the monitoring of medical treatment of nonmelanoma skin cancer. The technology is however still evolving and continued technological development will necessitate an ongoing evaluation of its diagnostic accuracy. Several technical solutions are being pursued to further improve the quality of the images and the data provided, and OCT isbeing integrated in multimodal imaging devices that would potentially be able to provide a quantum leap to the imaging of skin in vivo.

  16. Spectral estimation optical coherence tomography for axial super-resolution.

    Science.gov (United States)

    Liu, Xinyu; Chen, Si; Cui, Dongyao; Yu, Xiaojun; Liu, Linbo

    2015-10-01

    The depth reflectivity profile of Fourier domain optical coherence tomography (FD-OCT) is estimated from the inverse Fourier transform of the spectral interference signals (interferograms). As a result, the axial resolution is fundamentally limited by the coherence length of the light source. We demonstrate that using the autoregressive spectral estimation technique instead of the inverse Fourier transform, to analyze the spectral interferograms can improve the axial resolution. We name this method spectral estimation OCT (SE-OCT). SE-OCT breaks the coherence length limitation and improves the axial resolution by a factor of up to 4.7 compared with FD-OCT. Furthermore, SE-OCT provides complete sidelobe suppression in the depth point-spread function, further improving the image quality. We demonstrate that these technical advances enables clear identification of corneal endothelium anatomical details ex vivo that cannot be identified using the corresponding FD-OCT. Given that SE-OCT can be implemented in the FD-OCT devices without any hardware changes, the new capabilities provided by SE-OCT are likely to offer immediate improvements to the diagnosis and management of diseases based on OCT imaging. PMID:26480165

  17. OCT y fototoxicidad macular / Optical coherence tomography and macular phototoxicity

    Scientific Electronic Library Online (English)

    N.A., Rodríguez-Marco; J., Andonegui-Navarro; E., Compains-Silva; A., Rebollo-Aguayo; D., Aliseda-Pérez-de-Madrid; M., Aranguren-Laflin.

    2008-04-01

    Full Text Available Caso clínico: Se realiza una exploración ocular y tomografía de coherencia óptica (OCT) en tres pacientes con lesiones fototóxicas retinianas. Las angiografías fluoresceínicas muestran un defecto ventana. La OCT muestra hiporreflectividad en la porción externa de la fóvea y fragmentación de las capa [...] s más internas entre la porción interna de los fotorreceptores y los segmentos externos. Discusión: Las lesiones retinianas tras exposición a la luz aparecen precozmente mostrando diferentes patrones en la OCT. La OCT sugiere que la disminución de visión asocia una lesión de fotorreceptores y epitelio pigmentario retiniano (EPR). La OCT es útil para objetivar la retinopatía fototóxica donde los cambios oftalmoscópicos pueden estar ausentes o ser mínimos. Abstract in english Case report: Ocular examinations and optical coherence tomography (OCT) were performed in three patients with retinal phototoxicity lesions. Fluorescein angiography depicted a window defect. OCT exhibited hyporeflectivity at the outer foveal retina and fragmentation of the inner reflective layers, c [...] orresponding to the junction between the inner and outer photoreceptor segments. Discussion: Retinal damage after light exposure has a rapid onset and shows different patterns in OCT examination. OCT findings suggest that decreased visual acuity may be associated with full-thickness photoreceptors and retinal pigment epithelium (RPE) involvement. OCT is a useful tool for objective assessment of retinal pathology in phototoxicity cases where fundus changes may be minimal or absent.

  18. Polarization sensitive spectroscopic optical coherence tomography for multimodal imaging

    Science.gov (United States)

    Str?kowski, Marcin R.; Kraszewski, Maciej; Str?kowska, Paulina; Trojanowski, Micha?

    2015-03-01

    Optical coherence tomography (OCT) is a non-invasive method for 3D and cross-sectional imaging of biological and non-biological objects. The OCT measurements are provided in non-contact and absolutely safe way for the tested sample. Nowadays, the OCT is widely applied in medical diagnosis especially in ophthalmology, as well as dermatology, oncology and many more. Despite of great progress in OCT measurements there are still a vast number of issues like tissue recognition or imaging contrast enhancement that have not been solved yet. Here we are going to present the polarization sensitive spectroscopic OCT system (PS-SOCT). The PS-SOCT combines the polarization sensitive analysis with time-frequency analysis. Unlike standard polarization sensitive OCT the PS-SOCT delivers spectral information about measured quantities e.g. tested object birefringence changes over the light spectra. This solution overcomes the limits of polarization sensitive analysis applied in standard PS-OCT. Based on spectral data obtained from PS-SOCT the exact value of birefringence can be calculated even for the objects that provide higher order of retardation. In this contribution the benefits of using the combination of time-frequency and polarization sensitive analysis are being expressed. Moreover, the PS-SOCT system features, as well as OCT measurement examples are presented.

  19. Optical coherence tomography in the diagnosis of basal cell carcinoma.

    Science.gov (United States)

    Hussain, Alia Arif; Themstrup, Lotte; Jemec, Gregor Borut Ernst

    2015-01-01

    Since its introduction in dermatology in the late 1990s optical coherence tomography (OCT) has been used to study many skin diseases, in particular non-melanoma skin cancer and it s precursors. Special attention has been paid to superficial basal cell carcinoma (BCC), and a number of smaller observational studies have been published. The diagnostic criteria for BCC of these studies are systematically reviewed. A systemic review of English language studies was performed using PubMed, Google Scholar and Royal Danish Library, to search for primary papers on OCT and BCC. The references of retrieved papers were searched by hand for further relevant papers. A total of 39 papers were identified (search date: 2014-01-15). 22 were excluded because they did not meet the inclusion criteria, leaving 17 papers for analysis. In 100% of the studies, rounded dark structures in the upper dermis surrounded by a hyperreflective halo possibly surrounded by a hyporeflective border and disruption of epidermal layering were described. In 53% of the reports a hyporeflective lateral tumour border was described. A range of other features were mentioned in a minority of the studies. It is suggested that these diagnostic criteria could be characteristic for identifying BCC lesions using OCT. PMID:25223745

  20. Optical Coherence Tomography Angiography in Central Serous Chorioretinopathy

    Science.gov (United States)

    Costanzo, Eliana; Cohen, Salomon Yves; Miere, Alexandra; Querques, Giuseppe; Capuano, Vittorio; Semoun, Oudy; El Ameen, Ala'a; Oubraham, Hassiba; Souied, Eric H.

    2015-01-01

    Purpose. To analyze optical coherence tomography angiography (OCTA) findings in eyes with central serous chorioretinopathy (CSC) and to compare them with those obtained with multimodal imaging. Methods. A series of consecutive patients diagnosed with CSC, underwent OCTA and multimodal imaging, including spectral domain OCT, fluorescein, and indocyanine green angiography. OCTA images were performed at three main depth intervals: automatically segmented outer retina, manually adjusted outer retina, and automatically segmented choriocapillaris. Results. Thirty-three eyes of 32 consecutive patients were analyzed. OCTA showed 3 main anomalies at the choriocapillaris: the presence of dark areas (19/33 eyes) which were frequently associated with serous retinal detachment, presence of dark spots (7/33 eyes) which were frequently associated with retinal pigment epithelium detachment, and presence of abnormal vessels (12/33 eyes) which were frequently, but not systematically, associated with choroidal neovascularization, as confirmed by multimodal imaging. Conclusions. OCTA revealed dark areas and dark spots, which were commonly observed. An abnormal choroidal pattern was also observed in one-third of cases, even when multimodal imaging did not evidence any choroidal neovascularization. Abnormal choroidal vessels should be interpreted with caution, and we could assume that this pathological choroidal vascular pattern observed in many CSC cases could be distinct from CNV. PMID:26634150

  1. The potential of optical coherence tomography for diagnosing meniscal pathology

    International Nuclear Information System (INIS)

    Meniscal tears are often associated with anterior cruciate ligament (ACL) injury and may lead to pain and discomfort in humans. Maximal preservation of meniscal tissue is highly desirable to mitigate the progression of osteoarthritis. Guidelines of which meniscal tears are amenable to repair and what part of damaged tissues should be removed are elusive and lacking consensus. Images of microstructural changes in meniscus would potentially guide the surgeons to manage the meniscal tears better, but the resolution of current diagnostic techniques is limited for this application. In this study, we demonstrated the feasibility of using optical coherence tomography (OCT) for the diagnosis of meniscal pathology. Torn medial menisci were collected from dogs with ACL insufficiency. The torn meniscus was divided into three tissue samples and scanned by OCT and scanning electron microscopy (SEM). OCT and SEM images of torn menisci were compared. Each sample was evaluated for gross and microstructural abnormalities and reduction or loss of birefringence from the OCT images. The abnormalities detected with OCT were described for each type of tear. OCT holds promise in non-destructive and fast assessment of microstructural changes and tissue birefringence of meniscal tears. Future development of intraoperative OCT may help surgeons in the decision making of meniscal treatment

  2. The potential of optical coherence tomography for diagnosing meniscal pathology

    Science.gov (United States)

    Hang-Yin Ling, Carrie; Pozzi, Antonio; Thieman, Kelley M.; Tonks, Catherine A.; Guo, Shuguang; Xie, Huikai; Horodyski, MaryBeth

    2010-04-01

    Meniscal tears are often associated with anterior cruciate ligament (ACL) injury and may lead to pain and discomfort in humans. Maximal preservation of meniscal tissue is highly desirable to mitigate the progression of osteoarthritis. Guidelines of which meniscal tears are amenable to repair and what part of damaged tissues should be removed are elusive and lacking consensus. Images of microstructural changes in meniscus would potentially guide the surgeons to manage the meniscal tears better, but the resolution of current diagnostic techniques is limited for this application. In this study, we demonstrated the feasibility of using optical coherence tomography (OCT) for the diagnosis of meniscal pathology. Torn medial menisci were collected from dogs with ACL insufficiency. The torn meniscus was divided into three tissue samples and scanned by OCT and scanning electron microscopy (SEM). OCT and SEM images of torn menisci were compared. Each sample was evaluated for gross and microstructural abnormalities and reduction or loss of birefringence from the OCT images. The abnormalities detected with OCT were described for each type of tear. OCT holds promise in non-destructive and fast assessment of microstructural changes and tissue birefringence of meniscal tears. Future development of intraoperative OCT may help surgeons in the decision making of meniscal treatment.

  3. Time-resolved biofilm deformation measurements using optical coherence tomography.

    Science.gov (United States)

    Blauert, Florian; Horn, Harald; Wagner, Michael

    2015-09-01

    The interaction of shear stress with the biofilm leads to a dynamic deformation, which is related to the structural and material characteristics of biofilms. We show how optical coherence tomography can be used as an imaging technique to investigate the time-resolved deformation on the biofilm mesoscale as well as to estimate mechanical properties of the biofilm. For the first time time-resolved deformation from cross-sectional views of the inner biofilm structure could be shown. Changes in the biofilm structure and rheological properties were calculated from cross sections in real-time and time-lapsed measurements. Heterotrophic biofilms were grown in a flow cell set-up at low shear stress of ?w? =?0.01?Pa. By applying higher shear stress elastic and viscoelastic behavior of biofilms were quantified. Deformation led to a change in biofilm conformation and allowed to estimate rheological properties. Assuming an ideal wall shear stress calculation, the shear modulus G?=?29.7?±?1.7?Pa and the Young's modulus E?=?36.0?±?2.6?Pa were estimated. PMID:25786671

  4. Process monitoring of additive manufacturing by using optical tomography

    Science.gov (United States)

    Zenzinger, Guenter; Bamberg, Joachim; Ladewig, Alexander; Hess, Thomas; Henkel, Benjamin; Satzger, Wilhelm

    2015-03-01

    Parts fabricated by means of additive manufacturing are usually of complex shape and owing to the fabrication procedure by using selective laser melting (SLM), potential defects and inaccuracies are often very small in lateral size. Therefore, an adequate quality inspection of such parts is rather challenging, while non-destructive-techniques (NDT) are difficult to realize, but considerable efforts are necessary in order to ensure the quality of SLM-parts especially used for aerospace components. Thus, MTU Aero Engines is currently focusing on the development of an Online Process Control system which monitors and documents the complete welding process during the SLM fabrication procedure. A high-resolution camera system is used to obtain images, from which tomographic data for a 3dim analysis of SLM-parts are processed. From the analysis, structural irregularities and structural disorder resulting from any possible erroneous melting process become visible and may be allocated anywhere within the 3dim structure. Results of our optical tomography (OT) method as obtained on real defects are presented.

  5. Dispersion phenomenon and a compensation method in optical coherence tomography

    Science.gov (United States)

    Tao, Tao; Liao, Ran; Lu, Jun; Zhu, Hongyi

    2006-01-01

    The resolution of optical coherence tomography (OCT) depends on the spectral properties of the light sources used in OCT systems. The minimum distance that can be resolved by this technique is inversely proportional to the spectral width of the light source. Using broadband light sources, ultrahigh-resolution OCT can achieve axial image resolutions on the few micron scale. However, dispersion is known to increase the width of the envelope of the OCT signal and to reduce the resolution of OCT because different wavelengths of a broadband light source have different velocities in dispersive media. In the present paper, a super-luminescent diode (SLD) source is used to characterize the dispersion of different samples. The center wavelength of the light source is 845nm and spectral width is 26nm. A 30mm thick BK7 glass slab is tested. Based on the measured source spectrum, the broadened signals are calculated with the specific dispersion coefficients of different materials. The calculated signals are compared with the results measured in the experiments. A general numerical dispersion compensation method is present, which can both be applied in time domain and in frequency domain. Using this automatic iterative optimization method, the unbroadened signal can be regenerated with high resolution.

  6. Assessment of transcutaneous vaccine delivery by optical coherence tomography

    International Nuclear Information System (INIS)

    Immunization is one of the most efficient and cost-effective means for the prevention of diseases. The latest trend for inducing protective immunity is topical application of vaccines to intact skin rather than invasive administration via injection. Apart from being a non-invasive route of drug delivery, skin itself also offers advantages through the presence of cells of the immune system in both the dermis and epidermis. However, vaccine penetration through the outermost layers of skin is limited by the barrier provided by the Stratum corneum. In the current study utilizing conventional Optical Coherence Tomography (OCT) we investigate the transcutaneous delivery of a nano- particulate peptide vaccine into mouse skin in vivo. We demonstrate that a front of molecular diffusion within the skin can be clearly observed by using cross-correlations of successive 2D OCT images. Thus, OCT provides a unique tool for quantitative assessment of dynamics of diffusion of drugs, target compounds, analytes, cosmetics and various chemical agents in biological tissues in vivo

  7. Simulations of an Optical Tactile Sensor Based on Computer Tomography

    Science.gov (United States)

    Ohka, Masahiro; Sawamoto, Yasuhiro; Zhu, Ning

    In order to create a robotic tactile sensor of thin shape, a new optical tactile sensor is developed by applying a CT (Computer Tomography) algorithm. The present tactile sensor is comprised of infrared emitting diode arrays, receiving phototransistor arrays and a transparent acrylic plate and a black rubber sheet with projections. Infrared rays emitted from the diode array are directed into one end of the plate and their intensity distribution is measured by the phototransistor array mounted on the other end. If the CT algorithm is directly applied to the tactile sensor, there are two shortcomings: the shape of the sensing area is limited to a circular region and there is a long calculation time. Thus, a new CT algorithm oriented to tactile sensing is proposed for overcoming these problems. In the present algorithm, a square sensing area is divided into an N-by-N array and algebraic equations are derived from the relationship between the input and output light intensities on the assumed light projections. Several reconstruction methods are considered for obtaining pressure values caused in the squares. In the present study, the ART (Algebraic Reconstruction Technique) and LU decomposition methods were employed, and these methods were compared to select the best reconstruction method. In a series of simulations, it was found that the LU decomposition method held an advantage for the present type of tactile sensor because of its robustness against disturbance and short calculation time.

  8. Optical coherence tomography-guided classification of epiretinal membranes.

    Science.gov (United States)

    Konidaris, Vasileios; Androudi, Sofia; Alexandridis, Alexandros; Dastiridou, Anna; Brazitikos, Periklis

    2015-08-01

    To study and classify epiretinal membranes (ERMs) based on spectral domain optical coherence tomography (SD-OCT) findings. One hundred and twelve patients with ERMs were examined clinically and underwent OCT examination. The anatomical structure of the macula and vitreoretinal interface was studied. ERMs were classified in two categories: A, with posterior vitreous detachment (PVD) (91 cases), and B, with the absence of PVD (21 cases). Category A was divided into two subcategories: A1, without contraction of the ERM (37 cases), and A2, with the presence of membrane contraction (54 cases). A2 was further subdivided into A2.1, with retinal folding (15 cases), A2.2, with edema (23 cases), A2.3, with cystoid macular edema (9 cases), and A2.4, with lamellar macular hole (7 cases). Category B was divided in two subcategories: B1, without vitreomacular traction (VMT) (4 cases), and B2, with the presence of VMT (17 cases). Category B2 was subdivided into B2.1, with edema (9 cases), B2.2, presenting retinal detachment (5 cases), and B2.3, with schisis (3 cases). OCT classification of ERMs provides useful information on the anatomical structure of the retina, and the accurate estimation of vitreoretinal interface. PMID:25038740

  9. Process monitoring of additive manufacturing by using optical tomography

    International Nuclear Information System (INIS)

    Parts fabricated by means of additive manufacturing are usually of complex shape and owing to the fabrication procedure by using selective laser melting (SLM), potential defects and inaccuracies are often very small in lateral size. Therefore, an adequate quality inspection of such parts is rather challenging, while non-destructive-techniques (NDT) are difficult to realize, but considerable efforts are necessary in order to ensure the quality of SLM-parts especially used for aerospace components. Thus, MTU Aero Engines is currently focusing on the development of an Online Process Control system which monitors and documents the complete welding process during the SLM fabrication procedure. A high-resolution camera system is used to obtain images, from which tomographic data for a 3dim analysis of SLM-parts are processed. From the analysis, structural irregularities and structural disorder resulting from any possible erroneous melting process become visible and may be allocated anywhere within the 3dim structure. Results of our optical tomography (OT) method as obtained on real defects are presented

  10. Process monitoring of additive manufacturing by using optical tomography

    Energy Technology Data Exchange (ETDEWEB)

    Zenzinger, Guenter, E-mail: guenter.zenzinger@mtu.de, E-mail: alexander.ladewig@mtu.de; Bamberg, Joachim, E-mail: guenter.zenzinger@mtu.de, E-mail: alexander.ladewig@mtu.de; Ladewig, Alexander, E-mail: guenter.zenzinger@mtu.de, E-mail: alexander.ladewig@mtu.de; Hess, Thomas, E-mail: guenter.zenzinger@mtu.de, E-mail: alexander.ladewig@mtu.de; Henkel, Benjamin, E-mail: guenter.zenzinger@mtu.de, E-mail: alexander.ladewig@mtu.de; Satzger, Wilhelm, E-mail: guenter.zenzinger@mtu.de, E-mail: alexander.ladewig@mtu.de [MTU Aero Engines AG, Dachauerstrasse 665, 80995 Munich (Germany)

    2015-03-31

    Parts fabricated by means of additive manufacturing are usually of complex shape and owing to the fabrication procedure by using selective laser melting (SLM), potential defects and inaccuracies are often very small in lateral size. Therefore, an adequate quality inspection of such parts is rather challenging, while non-destructive-techniques (NDT) are difficult to realize, but considerable efforts are necessary in order to ensure the quality of SLM-parts especially used for aerospace components. Thus, MTU Aero Engines is currently focusing on the development of an Online Process Control system which monitors and documents the complete welding process during the SLM fabrication procedure. A high-resolution camera system is used to obtain images, from which tomographic data for a 3dim analysis of SLM-parts are processed. From the analysis, structural irregularities and structural disorder resulting from any possible erroneous melting process become visible and may be allocated anywhere within the 3dim structure. Results of our optical tomography (OT) method as obtained on real defects are presented.

  11. Retinal and choroidal intravascular spectral-domain optical coherence tomography

    DEFF Research Database (Denmark)

    Willerslev, Anne; Li, Xiao

    2014-01-01

    Purpose:? To examine retinal and choroidal blood vessels using spectral-domain optical coherence tomography (SD-OCT). Methods:? Retrospective case series. Results:? Scans through retinal blood vessels in healthy subjects demonstrated vessel wall reflexes and a tri-layer profile of the blood column on longitudinal scans and a figure-of-eight configuration on cross-sectional scans. Intravascular reflectivity decreased with increasingly oblique angles of observation and was absent when blood flow was parallel to the line of sight. The high blood flow in the choroidal vessels in healthy subjects and the low flow in the retinal vessels in patients with ocular ischaemic syndrome and central retinal artery occlusion were both associated with lower reflectivity of the blood and an unstructured intravascular SD-OCT profile. Discussion:? This qualitative in vivo study found a characteristically structured SD-OCT profile of the blood column in retinal vessels with normal blood flow. Both structure and total reflectivityfaded when blood flow was lower or higher than normal or at oblique angles to the line of sight. In conclusion, SD-OCT scans of the vessels in the posterior pole of the eye may assist the clinical assessment of gross abnormalities of ocular blood flow, e.g. in carotid artery stenosis.

  12. Imaging of artificial cartilage with optical coherence tomography

    Science.gov (United States)

    Eder, K.; Schmitt, R.; Müller-Rath, R.

    2008-02-01

    Tissue Engineering methods have become more and more relevant for orthopedic applications, especially for cartilage repair with autologous chondrocytes. In order to monitor the healing process and bonding between cartilage and the artificial implant, the boundary zone must be imaged non-invasively, for example with OCT. Optical Coherence Tomography (OCT) is a short coherent light based measuring technique which allows the generation of cross-section images of semi-transparent media with a depth resolution of up to 5 ?m and a measuring depth of 1-2 mm. Especially for the imaging of cartilage OCT offers new diagnostic possibilities, as conventional methods such as ultrasound and x-ray imaging often do not yield satisfactory resolution or contrast. In this paper, an OCT measurement setup for imaging of human cartilage tissue with OCT is demonstrated, allowing a detection of local damaging and lesions. Furthermore, both compressed and uncompressed collagen gel pads were implanted into human cartilage samples. OCT measurements are presented for samples in different stages of growth, focusing on the boundary zones. Comparisons with histologies are shown, demonstrating the ability of OCT to enable a monitoring of the healing progress in tissue engineering based therapy.

  13. Left main dissection conservatively managed with optical coherence tomography guidance.

    Science.gov (United States)

    Binder, Ronald K; Boone, Robert H; Webb, John G

    2014-01-01

    Left main dissection (LMD) is a rare but feared complication of cardiac catheterization. It is usually managed by bailout stent implantation or coronary artery bypass surgery. We describe a case of iatrogenic, retrograde LMD during percutaneous coronary intervention. After covering the retrograde entry of the dissection in the ostial left anterior descending artery (LAD), optical coherence tomography (OCT) showed, that there was no antegrade entry in the left main and that the minimal true lumen area in the left main was 7.2 mm(2) . It was therefore decided to treat the LMD conservatively and reassess the results by angiography 6 months later. At follow-up angiography, no stenosis or residual dissection in the left main were noted. The patient was doing fine at 1-year follow-up. OCT is a valuable tool for assessing coronary artery dissections and may guide the decision, whether to stent or not to stent a dissection. In selected cases LMD may be managed conservatively. PMID:23613429

  14. Optical coherence tomography for nondestructive evaluation of fuel rod degradation

    Science.gov (United States)

    Renshaw, Jeremy B.; Jenkins, Thomas P.; Buckner, Benjamin D.; Friend, Brian

    2015-03-01

    Nuclear power plants regularly inspect fuel rods to ensure safe and reliable operation. Excessive corrosion can cause fuel failures which can have significant repercussions for the plant, including impacts on plant operation, worker exposure to radiation, and the plant's INPO rating. While plants typically inspect for fuel rod corrosion using eddy current techniques, these techniques have known issues with reliability in the presence of tenacious, ferromagnetic crud layers that can deposit during operation, and the nondestructive evaluation (NDE) inspection results can often be in error by a factor of 2 or 3. For this reason, alternative measurement techniques, such as Optical Coherence Tomography (OCT), have been evaluated that are not sensitive to the ferromagnetic nature of the crud. This paper demonstrates that OCT has significant potential to characterize the thickness of crud layers that can deposit on the surfaces of fuel rods during operation. Physical trials have been performed on simulated crud samples, and the resulting data show an apparent correlation between the crud layer thickness and the OCT signal.

  15. Fourier optics analysis of phase-mask-based path-length-multiplexed optical coherence tomography.

    Science.gov (United States)

    Yin, Biwei; Dwelle, Jordan; Wang, Bingqing; Wang, Tianyi; Feldman, Marc D; Rylander, Henry G; Milner, Thomas E

    2015-11-01

    Optical coherence tomography (OCT) is an imaging technique that constructs a depth-resolved image by measuring the optical path-length difference between broadband light backscattered from a sample and a reference surface. For many OCT sample arm optical configurations, sample illumination and backscattered light detection share a common path. When a phase mask is placed in the sample path, features in the detected signal are observed, which suggests that an analysis of a generic common path OCT imaging system is warranted. In this study, we present a Fourier optics analysis using a Fresnel diffraction approximation of an OCT system with a path-length-multiplexing element (PME) inserted in the sample arm optics. The analysis may be generalized for most phase-mask-based OCT systems. A radial-angle-diverse PME is analyzed in detail, and the point spread function, coherent transfer function, sensitivity of backscattering angular diversity detection, and signal formation in terms of sample spatial frequency are simulated and discussed. The analysis reveals important imaging features and application limitations of OCT imaging systems with a phase mask in the sample path optics. PMID:26560931

  16. An evaluation of meniscal collagenous structure using optical projection tomography

    International Nuclear Information System (INIS)

    The collagenous structure of menisci is a complex network of circumferentially oriented fascicles and interwoven radially oriented tie-fibres. To date, examination of this micro- architecture has been limited to two-dimensional imaging techniques. The purpose of this study was to evaluate the ability of the three-dimensional imaging technique; optical projection tomography (OPT), to visualize the collagenous structure of the meniscus. If successful, this technique would be the first to visualize the macroscopic orientation of collagen fascicles in 3-D in the meniscus and could further refine load bearing mechanisms in the tissue. OPT is an imaging technique capable of imaging samples on the meso-scale (1-10 mm) at a micro-scale resolution. The technique, similar to computed tomography, takes two-dimensional images of objects from incremental angles around the object and reconstructs them using a back projection algorithm to determine three-dimensional structure. Bovine meniscal samples were imaged from four locations (outer main body, femoral surface, tibial surface and inner main body) to determine the variation in collagen orientation throughout the tissue. Bovine stifles (n = 2) were obtained from a local abattoir and the menisci carefully dissected. Menisci were fixed in methanol and subsequently cut using a custom cutting jig (n = 4 samples per meniscus). Samples were then mounted in agarose, dehydrated in methanol and subsequently cleared using benzyl alcohol benzyl benzoate (BABB) and imaged using OPT. Results indicate circumferential, radial and oblique collagenous orientations at the contact surfaces and in the inner third of the main body of the meniscus. Imaging identified fascicles ranging from 80-420 ?m in diameter. Transition zones where fascicles were found to have a woven or braided appearance were also identified. The outer-third of the main body was composed of fascicles oriented predominantly in the circumferential direction. Blood vessels were also visualized using this technique, as their elastin content fluoresces more brightly than collagen at the 425 nm wavelength used by the OPT scanner. OPT was capable of imaging the collagenous structure, as well as blood vessels in the bovine meniscus. Collagenous structure variability, including transition zones between structural regions not previously described in the meniscus, was identified using this novel technique

  17. Image reconstruction in optical tomography using Radon transform and its inverse

    Science.gov (United States)

    Petrehus, Viorel; Gavrila, Camelia; Gruia, Ion

    2009-10-01

    Optical tomography is a new medical imaging modality that is at the threshold of realization. A large amount of clinical work has shown the very real benefits that such a method could provide. At the same time a considerable effort has been put into theoretical studies of its probable success. At present there exist gaps between these two realms. In this paper we review some general approaches to inverse problems to set the context for optical tomography. An essential requirement is to treat the problem in a nonlinear fashion, by using an iterative method. The inverse problem is approached by numerical solutions methods using MathCad program. The Radon transform is the basic tool of the computerized tomography. In the sequel we introduce this transform, review some properties and present a numerical program for its inversion. We show some results that represent the most complex and realistic simulations of optical tomography yet developed.

  18. Theoretical study of Acousto-optical coherence tomography using random phase jumps on US and light

    OpenAIRE

    Lesaffre, Max; Farahi, Salma; Boccara, A.C.; Ramaz, François; Gross, Michel

    2011-01-01

    Acousto-Optical Coherence Tomography (AOCT) is variant of Acousto Optic Imaging (called also ultrasonic modulation imaging) that makes possible to get z resolution with acoustic and optic Continuous Wave (CW) beams. We describe here theoretically the AOCT e ect, and we show that the Acousto Optic tagged photons remains coherent if they are generated within a speci c z region of the sample. We quantify the z selectivity for both the tagged photon eld, and for the M. Lesa re e...

  19. Numerical simulation of x-ray luminescence optical tomography for small-animal imaging

    OpenAIRE

    Li, ChangQing; Martínez-Dávalos, Arnulfo; Cherry, Simon R.

    2014-01-01

    X-ray luminescence optical tomography (XLOT) is an emerging hybrid imaging modality in which x-ray excitable particles (phosphor particles) emit optical photons when stimulated with a collimated x-ray beam. XLOT can potentially combine the high sensitivity of optical imaging with the high spatial resolution of x-ray imaging. For reconstruction of XLOT data, we compared two reconstruction algorithms, conventional filtered backprojection (FBP) and a new algorithm, x-ray luminescence optical tom...

  20. Common-Path Optical Coherence Tomography for Biomedical Imaging and Sensing

    OpenAIRE

    Kang, Jin U; Han, Jae-Ho; Liu, Xuan; Zhang, Kang

    2010-01-01

    This paper describes a development of a fiber optic common-path optical coherence tomography (OCT) based imaging and guided system that possess ability to reliably identify optically transparent targets that are on the micron scale; ability to maintain a precise and safe position from the target; ability to provide spectroscopic imaging; ability to imaging biological target in 3-D. The system is based on a high resolution fiber optic Common-Path OCT (CP-OCT) that can be integrated into variou...

  1. All fiber optics circular-state swept source polarization-sensitive optical coherence tomography.

    Science.gov (United States)

    Lin, Hermann; Kao, Meng-Chun; Lai, Chih-Ming; Huang, Jyun-Cin; Kuo, Wen-Chuan

    2014-02-01

    A swept source (SS)-based circular-state (CS) polarization-sensitive optical coherence tomography (PS-OCT) constructed entirely with polarization-maintaining fiber optics components is proposed with the experimental verification. By means of the proposed calibration scheme, bulk quarter-wave plates can be replaced by fiber optics polarization controllers to, therefore, realize an all-fiber optics CS SSPS-OCT. We also present a numerical dispersion compensation method, which can not only enhance the axial resolution, but also improve the signal-to-noise ratio of the images. We demonstrate that this compact and portable CS SSPS-OCT system with an accuracy comparable to bulk optics systems requires less stringent lens alignment and can possibly serve as a technology to realize PS-OCT instrument for clinical applications (e.g., endoscopy). The largest deviations in the phase retardation (PR) and fast-axis (FA) angle due to sample probe in the linear scanning and a rotation angle smaller than 65 deg were of the same order as those in stationary probe setups. The influence of fiber bending on the measured PR and FA is also investigated. The largest deviations of the PR were 3.5 deg and the measured FA change by ~12 to 21 deg. Finally, in vivo imaging of the human fingertip and nail was successfully demonstrated with a linear scanning probe. PMID:24084890

  2. Consensus standards for acquisition, measurement, and reporting of intravascular optical coherence tomography studies : a report from the international working group for intravascular optical coherence tomography standardization and validation

    DEFF Research Database (Denmark)

    Tearney, Guillermo J; Regar, Evelyn

    2012-01-01

    The purpose of this document is to make the output of the International Working Group for Intravascular Optical Coherence Tomography (IWG-IVOCT) Standardization and Validation available to medical and scientific communities, through a peer-reviewed publication, in the interest of improving the diagnosis and treatment of patients with atherosclerosis, including coronary artery disease.

  3. Consensus standards for acquisition, measurement, and reporting of intravascular optical coherence tomography studies : a report from the International Working Group for Intravascular Optical Coherence Tomography Standardization and Validation

    DEFF Research Database (Denmark)

    Tearney, Guillermo J; Regar, Evelyn

    2012-01-01

    The purpose of this document is to make the output of the International Working Group for Intravascular Optical Coherence Tomography (IWG-IVOCT) Standardization and Validation available to medical and scientific communities, through a peer-reviewed publication, in the interest of improving the diagnosis and treatment of patients with atherosclerosis, including coronary artery disease.

  4. Development and Application of Multifunctional Optical Coherence Tomography

    Science.gov (United States)

    Zhi, Zhongwei

    Microcirculation refers to the functions of capillaries and the neighboring lymphatic vessels. It plays a vital role in the pathophysiology of disorders in many clinical areas including cardiology, dermatology, neurology and ophthalmology, and so forth. It is crucial to develop imaging technologies that can provide both qualitative and quantitative information as to how microcirculation responds to certain injury and/or disease, and its treatment. Optical coherence tomography (OCT) is a non-invasive optical imaging technique for high-resolution cross-sectional imaging of specimens, with many applications in clinical medicine. Current state-of-the-art OCT systems operate in the Fourier domain, using either a broadband light source with a spectrometer, known as spectral domain OCT (SDOCT), or a rapidly tunable laser, known as swept source OCT (SSOCT). The current Fourier domain OCT systems have dramatically improvement in sensitivity, resolution and speed compared to time domain OCT. In addition to the improvement in the OCT system hardware, different methods for functional measurements of tissue beds have been developed and demonstrated. This includes but not limited to, i) Phase-resolved Doppler OCT for quantifying the blood flow, ii) OCT angiography for visualization of microvasculature, iii) Polarization sensitive OCT for measuring the intrinsic optical property/ birefringence of tissue, iv) spectroscopic OCT for measuring blood oxygenation, etc. Functional OCT can provide important clinical information that is not available in the typical intensity based structural OCT images. Among these functional OCT modalities, Doppler OCT and OCT angiography attract great interests as they show high capability for in vivo study of microvascular pathology. By analyzing the Doppler effect of a flowing particle on light frequency, Doppler OCT allows the quantification of the blood flow speed and blood flow rate. The most popular approach for Doppler OCT is achieved through analysis of the phase term in complex OCT signal which termed as Phase-resolved Doppler OCT. However, as limited by the phase noise and motion, Phase-resolved Doppler OCT can only be applied for relative large blood vessels, such as arterioles and venules. On the other hand, in order to visualize the microcirculation network, a number of strategies to enable better contrast of microvasculature components, which we termed OCT angiography, have been introduced during recent years. As a variation of Fourier domain OCT, optical microangiography (OMAG) is one of earliest proposed OCT angiography technique which is capable of generating 3D images of dynamic blood perfusion distribution within microcirculatory tissue beds. The OMAG algorithm works by separating the static and moving elements by high pass filtering on complex valued interferometric data after Fourier transform. Based on the conventional OMAG algorithm, we further developed ultra-high sensitive OMAG (UHS-OMAG) by switching the high-pass filtering from fast scan direction (adjacent A-lines within one B-frame) to slow scan direction (adjacent B-frames), which has a dramatically improved performance for capillary network imaging and analysis. Apart from the microvascular study with current available functional OCT for, visualization of the lymphatic system (lymph nodes and lymphatic vessels) plays a significant role in assessing patients with various malignancies and lymphedema. However, there is a lack of label-free and noninvasive method for lymphangiography. Hence, a cutting edge research to investigate the capability of OCT as a tool for non-invasive and label-free lymphangiography would be highly desired. The objective of my thesis is to develop a multiple-functional SDOCT system to image the microcirculation and quantify the several important parameters of microcirculation within microcirculatory tissue beds, and further apply it for pre-clinical research applications. The multifunctional OCT system provides modalities including structural OCT, OCT angiography, Doppler OCT and Optical lymphangiography,

  5. Evaluation of caries-affected dentin with optical coherence tomography

    Scientific Electronic Library Online (English)

    Cynthia Soares de, Azevedo; Luciana Cardoso Espejo, Trung; Maria Regina Lorenzetti, Simionato; Anderson Zanardi de, Freitas; Adriana Bona, Matos.

    2011-10-01

    Full Text Available The purpose of this study was to evaluate the degree of demineralization of artificially induced caries-affected human dentin by an in vitro microbiological method. The occlusal surfaces of 6 human molar teeth were abraded until a flat surface was obtained, and the enamel was removed to expose the o [...] cclusal dentin surface. These teeth were sectioned in 12 halves in the vestibular-lingual direction and divided into 3 groups according to the period length of the microbiological essay (n = 4): G1, 7 days; G2, 14 days; and G3, 21 days. The surfaces of all specimens were protected by an acid-resistant nail varnish, except for a window where the caries lesion was induced by a Streptoccocus mutans biofilm in a batch-culture model supplemented with 5% sucrose. The specimens were then analyzed by optical coherence tomography (OCT) with a super-luminescent light diode (? = 930 nm) with 6.0-µm lateral and longitudinal resolution (in the air). Qualitative and quantitative results (images and average dentin demineralization, respectively) were obtained. The mean demineralization depths were (µm) 235 ± 31.4, 279 ± 14, and 271 ± 8.3 in groups 1, 2, and 3, respectively. In addition, no significant change was observed in the lesion mean depth from 7 days of cariogenic challenge on. In conclusion, OCT was shown to be an efficient and non-invasive method to detect the depths of lesions caused by demineralization. Further, a seven-day demineralization time was considered sufficient for caries-affected dentin to be obtained.

  6. Evaluation of caries-affected dentin with optical coherence tomography

    Directory of Open Access Journals (Sweden)

    Cynthia Soares de Azevedo

    2011-10-01

    Full Text Available The purpose of this study was to evaluate the degree of demineralization of artificially induced caries-affected human dentin by an in vitro microbiological method. The occlusal surfaces of 6 human molar teeth were abraded until a flat surface was obtained, and the enamel was removed to expose the occlusal dentin surface. These teeth were sectioned in 12 halves in the vestibular-lingual direction and divided into 3 groups according to the period length of the microbiological essay (n = 4: G1, 7 days; G2, 14 days; and G3, 21 days. The surfaces of all specimens were protected by an acid-resistant nail varnish, except for a window where the caries lesion was induced by a Streptoccocus mutans biofilm in a batch-culture model supplemented with 5% sucrose. The specimens were then analyzed by optical coherence tomography (OCT with a super-luminescent light diode (? = 930 nm with 6.0-µm lateral and longitudinal resolution (in the air. Qualitative and quantitative results (images and average dentin demineralization, respectively were obtained. The mean demineralization depths were (µm 235 ± 31.4, 279 ± 14, and 271 ± 8.3 in groups 1, 2, and 3, respectively. In addition, no significant change was observed in the lesion mean depth from 7 days of cariogenic challenge on. In conclusion, OCT was shown to be an efficient and non-invasive method to detect the depths of lesions caused by demineralization. Further, a seven-day demineralization time was considered sufficient for caries-affected dentin to be obtained.

  7. Optical coherence tomography for imaging of chronic total occlusions

    Science.gov (United States)

    Munce, Nigel R.; Yang, Victor X. D.; Qiang, Beiping; Courtney, Brian K.; Brzozowski, Lukasz; Bakueva, Ludmilla; Mao, Linda Y.; Standish, Beau; Butany, Jagdish; Dick, Alexander J.; Strauss, Bradley H.; Wright, Graham A.; Vitkin, Alex

    2005-09-01

    Chronic total occlusions (CTOs) are defined as complete occlusions of an artery older than one month. Minimally invasive catheter-based interventions commonly employed for partial occlusions (e.g., balloon angioplasty followed by stenting) are problematic in CTOs because of the phycisian's inability to pass the device through the occlusion without a significant risk of arterial wall perforations. Furthermore, successfully treated CTOs exhibit a high re-occlusion rate. As a result, these cases are mostly sent to bypass surgery. With the advent of drug-eluting stents that reduce the incidence of re-occlusion, and thus, eliminating the second problem, new devices have begun to emerge that aim to recanalize CTOs without the cost and trauma of bypass surgery. These devices, however, need effective image guidance methods to ensure successful crossing of the CTOs. Optical coherence tomography (OCT) is being evaluated as an intravascular imaging modality for guiding catheter-based interventions of CTOs. Occluded ex vivo human arterial samples were used to produce longitudinal cross-sections using an OCT system. These OCT images were compared with histology to assess OCT's ability to identify different components of the occluded artery, evaluate the imaging depth, and determine the ability to detect the underlying vessel wall. Given the inherent difficulties of creating a mechanically scanning OCT probe in the distal tip of a catheter for use in a stenotic artery, we directed our initial efforts towards developing a "motionless" fiber based OCT system using a single mode fiber array. We discuss design considerations for implementing a forward viewing intravascular OCT probe.

  8. Retinal neurodegeneration on optical coherence tomography and cerebral atrophy.

    Science.gov (United States)

    Ong, Yi-Ting; Hilal, Saima; Cheung, Carol Y; Venketasubramanian, Narayanaswamy; Niessen, Wiro J; Vrooman, Henri; Anuar, Ainur R; Chew, Merwyn; Chen, Christopher; Wong, Tien Yin; Ikram, Mohammad Kamran

    2015-01-01

    Neurodegeneration in dementia is mainly evaluated by assessing cerebral atrophy, while retinal neurodegeneration can be quantified in vivo using optical coherence tomography (OCT). We examined the association of retinal nerve fibre layer (RNFL) and ganglion cell-inner plexiform layer (GC-IPL) thinning with global and regional cerebral atrophy on magnetic resonance imaging (MRI). Malay participants aged 60-80 years from the Epidemiology of Dementia in Singapore Study underwent comprehensive examinations, including 3-Tesla cranial MRI. RNFL and GC-IPL thicknesses were obtained from spectral domain-OCT; and cerebral grey and white matter volumes were obtained from MRI scans using a validated segmentation tool. Linear regression models were constructed with adjustment for age and sex; and additionally for vascular risk factors and MRI markers including intracranial volume. 164 participants without glaucoma with gradable quality MRI and OCT scans were included for analysis. GC-IPL thinning was associated with reduction in total brain volume in the occipital (mean change in GC-IPL per standard deviation (SD) decrease in occipital lobe volume: -1.77 ?m, 95% confidence interval (CI) -6.55 to 0.01 ?m) and temporal lobes (mean change in GC-IPL per SD decrease in temporal lobe volume: -3.45 ?m, 95%CI -5.40 to -1.49 ?m) in multivariate adjusted models. In particular, GC-IPL thinning was primarily associated with grey matter volume, whereas no association was found with white matter changes. Retinal neuronal damage, as reflected by GC-IPL thinning, was independently associated with grey matter loss in the occipital and temporal lobes, suggesting that retinal OCT may provide insights for assessing neurodegeneration in the brain. PMID:25451722

  9. Validation of optical coherence tomography in vivo using cryostat histology

    International Nuclear Information System (INIS)

    We aimed to validate for the first time optical coherence tomography (OCT) measurements of epidermal thickness (ET) using cryopreparation for histology. OCT assessments of ET were performed on healthy skin using the algorithms as follows: first, peak-to-valley analysis of the A-scan (ET-OCT-V), second, line-traced image analysis of the B-scan (ET-OCT-IA). Histology was performed using cryostat sections which were also evaluated using the image analysis (ET-Histo). We selected 114 samples, including B-scans and corresponding histology, for method comparison between ET-OCT-IA and ET-Histo. Forty-two A-scans were available for method comparison between ET-OCT-V and ET-Histo. Bland and Altman plots revealed a marked bias with wide 95% limits of agreement for ET-OCT-V versus ET-Histo. Comparison of ET-OCT-IA versus ET-Histo revealed only a slight bias and narrow 95% limits of agreement. A-scan analysis for ET determination is linked to significant limitations and lacks agreement with histology. By contrast, we observed satisfactory agreement between ET-OCT-IA and ET-Histo indicating that both methods can be utilized interchangeably. OCT using the line-traced image analysis of the B-scan appears to be a valid and relatively practicable method for the determination of ET in vivo. Furthermore, the comparisons with the in vivo OCT profiles demonstrate that cryostat sectioning provides a better preservation of relative and absolute dimensions of skin layers than paraffin embedding. (note)

  10. Multispectral Cerenkov luminescence tomography for small animal optical imaging.

    Science.gov (United States)

    Spinelli, Antonello E; Kuo, Chaincy; Rice, Brad W; Calandrino, Riccardo; Marzola, Pasquina; Sbarbati, Andrea; Boschi, Federico

    2011-06-20

    Quite recently Cerenkov luminescence imaging (CLI) has been introduced as a novel pre-clinical imaging for the in vivo imaging of small animals such as mice. The CLI method is based on the detection of Cerenkov radiation (CR) generated by beta particles as they travel into the animal tissues with an energy such that Cerenkov emission condition is satisfied. This paper describes an image reconstruction method called multi spectral diffuse Cerenkov luminescence tomography (msCLT) in order to obtain 3D images from the detection of CR. The multispectral approach is based on a set of 2D planar images acquired using a number of narrow bandpass filters, and the distinctive information content at each wavelength is used in the 3D image reconstruction process. The proposed msCLT method was tested both in vitro and in vivo using 32P-ATP and all the images were acquired by using the IVIS 200 small animal optical imager (Caliper Life Sciences, Alameda USA). Source depth estimation and spatial resolution measurements were performed using a small capillary source placed between several slices of chicken breast. The theoretical Cerenkov emission spectrum and optical properties of chicken breast were used in the modelling of photon propagation. In vivo imaging was performed by injecting control nude mice with 10 MBq of 32P-ATP and the 3D tracer bio-distribution was reconstructed. Whole body MRI was acquired to provide an anatomical localization of the Cerenkov emission. The spatial resolution obtained from the msCLT reconstructed images of the capillary source showed that the FWHM is about 1.5 mm for a 6 mm depth. Co-registered MRI images showed that the Cerenkov emission regions matches fairly well with anatomical regions, such as the brain, heart and abdomen. Ex vivo imaging of the different organs such as intestine, brain, heart and ribs further confirms these findings. We conclude that in vivo 3D bio-distribution of a pure beta-minus emitting radiopharmaceutical such as 32P-ATP can be obtained using the msCLT reconstruction approach. PMID:21716501

  11. Imaging a full set of optical scattering properties of biological tissue by inverse spectroscopic optical coherence tomography

    OpenAIRE

    Yi, JI; Backman, Vadim

    2012-01-01

    We here develop a method to measure and image the full optical scattering properties by inverse spectroscopic optical coherence tomography (ISOCT). Tissue is modelled as a medium with continuous refractive index (RI) fluctuation and such a fluctuation is described by the RI correlation functions. Under the first-order Born approximation, the forward model is established for ISOCT. By measuring optical quantities of tissue including the scattering power (SP) of the OCT spectrum, the reflection...

  12. Optic axis determination by fibre-based polarization-sensitive swept-source optical coherence tomography

    International Nuclear Information System (INIS)

    We describe a fibre-based variable-incidence angle (VIA) polarization-sensitive swept-source optical coherence tomography (PS-SS-OCT) system to determine the 3D optical axis of birefringent biological tissues. Single-plane VIA-PS-OCT is also explored which requires measurement of the absolute fast-axis orientation. A state-of-the-art PS-SS-OCT system with some improvements both in hardware and software was used to determine the apparent optical birefringence of equine tendon for a number of different illumination directions. Polar and azimuthal angles of cut equine tendon were produced by the VIA method and compared with the nominal values. A quarter waveplate (QWP) and equine tendon were used as test targets to validate the fast-axis measurements using the system. Polar and azimuthal angles of cut equine tendon broadly agreed with the expected values within about 8% of the nominal values. A theoretical and experimental analysis of the effect of the sample arm fibre on determination of optical axis orientation using a proposed definition based on the orientation of the eigenpolarization ellipse experimentally confirms that this algorithm only works correctly for special settings of the sample arm fibre. A proposed algorithm based on the angle between Stokes vectors on the Poincare sphere is confirmed to work for all settings of the sample arm fibre. A calibration procedure is proposed to remove the sign ambiguity of the measured orientation and was confirmed experimentally by using the QWP.

  13. Imaging modal content of cone photoreceptors using adaptive optics optical coherence tomography

    Science.gov (United States)

    Liu, Zhuolin; Kocaoglu, Omer P.; Turner, Timothy L.; Miller, Donald T.

    2015-03-01

    It has been long established that photoreceptors capture light based on the principles of optical waveguiding. Yet after decades of experimental and theoretical investigations considerable uncertainty remains, even for the most basic prediction as to whether photoreceptors support more than a single waveguide mode. To test for modal behavior in human cone photoreceptors, we took advantage of adaptive-optics optical coherence tomography (AO-OCT, ?c=785 nm) to noninvasively image in three dimensions the reflectance profiles generated in the inner and outer segments (IS, OS) of cones. Mode content was examined over a range of cone diameters by imaging cones from 0.6° to 10° retinal eccentricity (n = 1802). Fundamental to the method was extraction of reflections at the cone IS/OS junction and cone outer segment tip (COST). Modal content properties of size, circularity and orientation were quantified using second moment analysis. Analysis of the cone reflections indicates waveguide properties of cone IS and OS depend on segment diameter. Cone IS was found to support a single mode near the fovea (<=3°) and multiple modes further away (<4°). In contrast, no evidence of multiple modes was found in the cone OSs. The IS/OS and COST reflections share a common optical aperture, are most circular near the fovea, and show no orientation preference.

  14. Simultaneous Topography and Tomography of Micro-structures using Full-field Swept-source Optical Coherence Tomography

    Science.gov (United States)

    Anna, Tulsi; Shakher, Chandra; Mehta, Dalip Singh

    2010-04-01

    A full-field swept source optical coherence tomographic (FF-SS-OCT) system has been reported for the simultaneous topography and tomography of the microstructures. Our optical set-up includes a swept-source which is a combination of super-luminescent diode (SLD) and acousto-optic tunable filter (AOTF), a compact Michelson interferometer and an area detector (CCD). Interference fringe signal was recorded by tuning the wavelength in a regular interval and fringe analysis was done by using Fourier-transform technique. By means of computing the inverse Fourier transform of the interference fringe signal both optically sectioned images (amplitude) and phase map of the microstructures were obtained. The present system is completely non-mechanical scanning, highly stable and very cost effective due to which it can be explored for many scientific and engineering applications.

  15. Diffuse optical correlation tomography of cerebral blood flow during cortical spreading depression in rat brain

    Science.gov (United States)

    Zhou, Chao; Yu, Guoqiang; Furuya, Daisuke; Greenberg, Joel; Yodh, Arjun; Durduran, Turgut

    2006-02-01

    Diffuse optical correlation methods were adapted for three-dimensional (3D) tomography of cerebral blood flow (CBF) in small animal models. The image reconstruction was optimized using a noise model for diffuse correlation tomography which enabled better data selection and regularization. The tomographic approach was demonstrated with simulated data and during in-vivo cortical spreading depression (CSD) in rat brain. Three-dimensional images of CBF were obtained through intact skull in tissues(~4mm) deep below the cortex.

  16. A unique stenosis in saphenous vein graft visualized by optical coherence tomography

    OpenAIRE

    Koeda, Yorihiko; Itoh, Tomonori; Fusazaki, Tetsuya; Nakamura, Motoyuki; Morino, Yoshihiro

    2013-01-01

    We present a case of a unique stenosis in a 12-year-old saphenous vein graft (SVG), to the right coronary artery, which was visualized by optical coherence tomography (OCT), before percutaneous coronary intervention. The patient was an 80-year-old man in whom the stenosis was documented by area-detector coronary computed tomography. OCT imaging demonstrated that the culprit lesion was a venous valve containing a thrombus before preintervention imaging. Coronary stenting was performed with a d...

  17. Noncontact quantitative biomechanical characterization of cardiac muscle using shear wave imaging optical coherence tomography

    OpenAIRE

    Wang, Shang; Lopez, Andrew L.; Morikawa, Yuka; Tao, Ge; Li, Jiasong; Larina, Irina V.; Martin, James F.; Larin, Kirill V

    2014-01-01

    We report on a quantitative optical elastographic method based on shear wave imaging optical coherence tomography (SWI-OCT) for biomechanical characterization of cardiac muscle through noncontact elasticity measurement. The SWI-OCT system employs a focused air-puff device for localized loading of the cardiac muscle and utilizes phase-sensitive OCT to monitor the induced tissue deformation. Phase information from the optical interferometry is used to reconstruct 2-D depth-resolved shear wave p...

  18. Optical Coherence Tomography in Multiple Sclerosis and Neuromyelitis Optica: An Update

    OpenAIRE

    Gema Rebolleda; Beatriz Manzano; Celia Oreja-Guevara; Silvia Muñoz; Inés Contreras; Susana Noval

    2011-01-01

    Optical coherence tomography (OCT) uses light interference patterns to produce a cross-sectional image of the retina. It is capable of measuring the unmyelinated axons of the retinal ganglionar cells as they converge on the optic disc. In a disease like multiple sclerosis (MS), in which axonal loss has been identified as an important cause of sustained disability, it may prove an invaluable tool. OCT has demonstrated that axonal loss occurs after each episode of optic neuritis and that the d...

  19. Polarization maintaining fiber based ultra-high resolution spectral domain polarization sensitive optical coherence tomography

    OpenAIRE

    2009-01-01

    We present a new ultra high resolution spectral domain polarization sensitive optical coherence tomography (PS-OCT) system based on polarization maintaining (PM) fibers. The method transfers the principles of our previous bulk optic PS-OCT systems to a fiberized setup. The phase shift between the orthogonal polarization states travelling in the two orthogonal modes of the PM fiber is compensated by software in post processing. Thereby, the main advantage of our bulk optics setups, i.e. the us...

  20. Crystal Optical Properties of Inhomogeneous Plates and the Problems of Polarization Tomography of Photoelastic Materials

    CERN Document Server

    Kushnir, O; Vlokh, R; Kukhtarev, N

    2005-01-01

    Using the Jones matrix formalism, crystal optical properties of inhomogeneous material consisting of a pile of weakly birefringent plates are analysed in relation to the cell model adopted in polarization tomography of 3D dielectric tensor field in photoelastic media. It is shown that the material manifests in general an "apparent" optical gyration caused by different orientations of the plates. Relations between the polarimetric parameters and the dielectric tensor components are ascertained for the case of weak optical anisotropy.

  1. Crystal Optical Properties of Inhomogeneous Plates and the Problems of Polarization Tomography of Photoelastic Materials

    Directory of Open Access Journals (Sweden)

    Kushnir O.

    2005-09-01

    Full Text Available Using the Jones matrix formalism, crystal optical properties of inhomogeneous material consisting of a pile of weakly birefringent plates are analysed in relation to the cell model adopted in polarization tomography of 3D dielectric tensor field in photoelastic media. It is shown that the material manifests in general an “apparent” optical gyration caused by different orientations of the plates. Relations between the polarimetric parameters and the dielectric tensor components are ascertained for the case of weak optical anisotropy.

  2. 3D Human cartilage surface characterization by optical coherence tomography

    Science.gov (United States)

    Brill, Nicolai; Riedel, Jörn; Schmitt, Robert; Tingart, Markus; Truhn, Daniel; Pufe, Thomas; Jahr, Holger; Nebelung, Sven

    2015-10-01

    Early diagnosis and treatment of cartilage degeneration is of high clinical interest. Loss of surface integrity is considered one of the earliest and most reliable signs of degeneration, but cannot currently be evaluated objectively. Optical Coherence Tomography (OCT) is an arthroscopically available light-based non-destructive real-time imaging technology that allows imaging at micrometre resolutions to millimetre depths. As OCT-based surface evaluation standards remain to be defined, the present study investigated the diagnostic potential of 3D surface profile parameters in the comprehensive evaluation of cartilage degeneration. To this end, 45 cartilage samples of different degenerative grades were obtained from total knee replacements (2 males, 10 females; mean age 63.8 years), cut to standard size and imaged using a spectral-domain OCT device (Thorlabs, Germany). 3D OCT datasets of 8??×??8, 4??×??4 and 1??×??1?mm (width??×??length) were obtained and pre-processed (image adjustments, morphological filtering). Subsequent automated surface identification algorithms were used to obtain the 3D primary profiles, which were then filtered and processed using established algorithms employing ISO standards. The 3D surface profile thus obtained was used to calculate a set of 21 3D surface profile parameters, i.e. height (e.g. Sa), functional (e.g. Sk), hybrid (e.g. Sdq) and segmentation-related parameters (e.g. Spd). Samples underwent reference histological assessment according to the Degenerative Joint Disease classification. Statistical analyses included calculation of Spearman’s rho and assessment of inter-group differences using the Kruskal Wallis test. Overall, the majority of 3D surface profile parameters revealed significant degeneration-dependent differences and correlations with the exception of severe end-stage degeneration and were of distinct diagnostic value in the assessment of surface integrity. None of the 3D surface profile parameters investigated were capable of reliably differentiating healthy from early-degenerative cartilage, while scan area sizes considerably affected parameter values. In conclusion, cartilage surface integrity may be adequately assessed by 3D surface profile parameters, which should be used in combination for the comprehensive and thorough evaluation and overall improved diagnostic performance. OCT- and image-based surface assessment could become a valuable adjunct tool to standard arthroscopy.

  3. Dispersion and compensation of optical coherence tomography using double-path rapid scanning optical delay line

    Science.gov (United States)

    Ye, Hai; Ling, Dongxiong; Xu, Yongzhao; Huang, Xiaoyuan

    2015-08-01

    Optical coherence tomography (OCT) with advantages of high resolution and high sensitivity is an emerging optical imaging technology that performs cross-sectional tomographic imaging of microstructure in biological system. In spite of the improvement of the longitudinal resolution by using low coherence light source, the dispersion effect aggravates with the increase of spectral bandwidth, which result in serious image blur and loss of image features. We demonstrate a double-path rapid scanning optical delay line (D-RSOD) structure in reference arm that produce the additional phase delay and group delay independent in OCT. The phase delay determined by grating defocus offset (GDO) of D-RSOD is controllable and the system dispersion is compensated by accurate adjustment of GDO in experiment. The full width at half maximum (FWHM) of the interference peak was measured to be 23.2?m and 15.2?m respectively before and after compensation. The experimental results indicate that the interference signal envelops shrink and the tomographic image clarify after dispersion compensation, D-RSOD is an effective means of dispersion compensation in OCT as well.

  4. Optical imaging of oral pathological tissue using optical coherence tomography and synchrotron radiation computed microtomography

    Science.gov (United States)

    Cânj?u, Silvana; Todea, Carmen; Sinescu, Cosmin; Negrutiu, Meda L.; Duma, Virgil; M?nescu, Adrian; Topal?, Florin I.; Podoleanu, Adrian Gh.

    2013-06-01

    The efforts aimed at early diagnosis of oral cancer should be prioritized towards developing a new screening instrument, based on optical coherence tomography (OCT), to be used directly intraorally, able to perform a fast, real time, 3D and non-invasive diagnosis of oral malignancies. The first step in this direction would be to optimize the OCT image interpretation of oral tissues. Therefore we propose plastination as a tissue preparation method that better preserves three-dimensional structure for study by new optical imaging techniques. The OCT and the synchrotron radiation computed microtomography (micro-CT) were employed for tissue sample analyze. For validating the OCT results we used the gold standard diagnostic procedure for any suspicious lesion - histopathology. This is a preliminary study of comparing features provided by OCT and Micro-CT. In the conditions of the present study, OCT proves to be a highly promising imaging modality. The use of x-ray based topographic imaging of small biological samples has been limited by the low intrinsic x-ray absorption of non-mineralized tissue and the lack of established contrast agents. Plastination can be used to enhance optical imagies of oral soft tissue samples.

  5. Laser-ablated silicon nanoparticles: optical properties and perspectives in optical coherence tomography

    Science.gov (United States)

    Kirillin, M. Yu; Sergeeva, E. A.; Agrba, P. D.; Krainov, A. D.; Ezhov, A. A.; Shuleiko, D. V.; Kashkarov, P. K.; Zabotnov, S. V.

    2015-07-01

    Due to their biocompatibility silicon nanoparticles have high potential in biomedical applications, especially in optical diagnostics. In this paper we analyze properties of the silicon nanoparticles formed via laser ablation in water and study the possibility of their application as contrasting agents in optical coherence tomography (OCT). The nanoparticles suspension was produced by picosecond laser irradiation of monocrystalline silicon wafers in water. According to transmission electron microcopy analysis the silicon nanoparticles in the obtained suspension vary in size from 2 to 200?nm while concentration of the particles is estimated as 1013cm-3. The optical properties of the suspension in the range from 400 to 1000?nm were studied by spectrophotometry measurements revealing a scattering coefficient of about 0.1?mm-1 and a scattering anisotropy factor in the range of 0.2-0.4. In OCT study a system with a central wavelength of 910?nm was employed. Potential of the silicon nanoparticles as a contrasting agent for OCT is studied in experiments with agarose gel phantoms. Topical application of the nanoparticles suspension allowed the obtaining of the contrast of structural features of phantom up to 14?dB in the OCT image.

  6. Tomography

    International Nuclear Information System (INIS)

    Already widely accepted in medicine, tomography can also be useful in industry. The theory behind tomography and a demonstration of the technique to inspect a motorcycle carburetor is presented. To demonstrate the potential of computer assisted tomography (CAT) to accurately locate defects in three dimensions, a sectioned 5 cm gate valve with a shrink cavity made visible by the sectioning was tomographically imaged using a Co-60 source. The tomographic images revealed a larger cavity below the sectioned surface. The position of this cavity was located with an in-plane and axial precision of approximately +-1 mm. The volume of the cavity was estimated to be approximately 40 mm3

  7. Diagnostic ability of barrett's index to detect dysthyroid optic neuropathy using multidetector computed tomography

    Scientific Electronic Library Online (English)

    Mário L. R., Monteiro; Allan C. P., Gonçalves; Carla T. M., Silva; Janete P., Moura; Carolina S., Ribeiro; Eloisa M.M.S., Gebrim.

    Full Text Available OBJECTIVES: The objective of this study was to evaluate the ability of a muscular index (Barrett's Index), calculated with multidetector computed tomography, to detect dysthyroid optic neuropathy in patients with Graves' orbitopathy. METHODS: Thirty-six patients with Graves' orbitopathy were prospec [...] tively studied and submitted to neuro-ophthalmic evaluation and multidetector computed tomography scans of the orbits. Orbits were divided into two groups: those with and without dysthyroid optic neuropathy. Barrett's index was calculated as the percentage of the orbit occupied by muscles. Sensitivity and specificity were determined for several index values. RESULTS: Sixty-four orbits (19 with and 45 without dysthyroid optic neuropathy) met the inclusion criteria for the study. The mean Barrett's index values (± SD) were 64.47% ± 6.06% and 49.44% ± 10.94%in the groups with and without dysthyroid optic neuropathy, respectively (p60% should be carefully examined and followed for the development of dysthyroid optic neuropathy.

  8. Spectral fractionation detection of gold nanorod contrast agents using optical coherence tomography.

    Science.gov (United States)

    Jia, Yali; Liu, Gangjun; Gordon, Andrew Y; Gao, Simon S; Pechauer, Alex D; Stoddard, Jonathan; McGill, Trevor J; Jayagopal, Ashwath; Huang, David

    2015-02-23

    We demonstrate the proof of concept of a novel Fourier-domain optical coherence tomography contrast mechanism using gold nanorod contrast agents and a spectral fractionation processing technique. The methodology detects the spectral shift of the backscattered light from the nanorods by comparing the ratio between the short and long wavelength halves of the optical coherence tomography signal intensity. Spectral fractionation further divides the halves into sub-bands to improve spectral contrast and suppress speckle noise. Herein, we show that this technique can detect gold nanorods in intralipid tissue phantoms. Furthermore, cellular labeling by gold nanorods was demonstrated using retinal pigment epithelial cells in vitro. PMID:25836459

  9. Optic nerve head analysis of superior segmental optic hypoplasia using Heidelberg retina tomography

    Directory of Open Access Journals (Sweden)

    Atsushi Miki

    2010-10-01

    Full Text Available Atsushi Miki1,2, Motohiro Shirakashi1, Kiyoshi Yaoeda1, Atsushi Fukushima1, Mineo Takagi1, Haruki Abe11Division of Ophthalmology and Visual Sciences, Niigata University Graduate School of Medical and Dental Sciences, Niigata, 2Department of Ophthalmology, Kawasaki Medical School, Okayama, JapanPurpose: To evaluate the optic disc characteristics of eyes with superior segmental optic hypoplasia (SSOH using the Heidelberg retina tomograph (HRT.Patients and methods: Thirteen eyes of 13 Japanese patients with SSOH were studied with the HRT (software version: 3.0. The group included six males and seven females, with a mean age of 34.7 years. Six optic disc parameters in the six sectors derived from the patients with SSOH were compared with those of 13 eyes of 13 normal controls. In addition, the diagnostic classification performance of the Frederick S Mikelberg (FSM discriminant function, glaucoma probability score (GPS, and Moorfields regression analysis (MRA were assessed.Results: When compared with normal subjects, many of the optic disc parameters were significantly altered in SSOH in the superior sectors. The area under the curve (AUC for the receiver operating characteristic was 0.932 for the rim area, 0.926 for the cup-to-disc area ratio, and 0.882 for the cup shape measure. Among the HRT parameters, the largest AUC (0.988 was found for the cup shape measure in the nasal superior segment. The proportion classified as outside normal limits by the FSM discriminant function was 92.3% (12 eyes. For GPS, six eyes (46.2% were classified as outside normal limits. For MRA, when borderline cases were considered test-negative or test-positive, 10 eyes (76.9% or 11 eyes (84.6% were classified as outside normal limits, respectively. The AUCs were 0.976 for the FSM discriminant function, 0.914 for the MRA overall classification, and 0.710 for the GPS overall classification.Conclusions: In eyes with SSOH, there is a significant thinning of the rim, especially in the nasal superior sector. Approximately half of the eyes with SSOH were classified as abnormal using indices developed for detecting glaucoma, but the sectorial analysis revealed that the affected sectors were different from those of glaucoma. Optic nerve head measurements using the HRT may be useful in evaluating the optic disc characteristics in eyes with SSOH.Keywords: superior segmental optic hypoplasia, Heidelberg retina tomography

  10. Functional imaging in bulk tissue specimens using optical emission tomography: fluorescence preservation during optical clearing

    Science.gov (United States)

    Sakhalkar, H. S.; Dewhirst, M.; Oliver, T.; Cao, Y.; Oldham, M.

    2007-04-01

    Optical emission computed tomography (optical-ECT) is a technique for imaging the three-dimensional (3D) distribution of fluorescent probes in biological tissue specimens with high contrast and spatial resolution. In optical-ECT, functional information can be imaged by (i) systemic application of functional labels (e.g. fluorophore labelled proteins) and/or (ii) endogenous expression of fluorescent reporter proteins (e.g. red fluorescent protein (RFP), green fluorescent protein (GFP)) in vivo. An essential prerequisite for optical-ECT is optical clearing, a procedure where tissue specimens are made transparent to light by sequential perfusion with fixing, dehydrating and clearing agents. In this study, we investigate clearing protocols involving a selection of common fixing (4% buffered paraformaldehyde (PFA), methanol and ethanol), dehydrating (methanol and ethanol) and clearing agents (methyl salicylate and benzyl-alcohol-benzyl-benzoate (BABB)) in order to determine a 'fluorescence friendly' clearing procedure. Cell culture experiments were employed to optimize the sequence of chemical treatments that best preserve fluorescence. Texas red (TxRed), fluorescein isothiocyanate (FITC), RFP and GFP were tested as fluorophores and fluorescent reporter proteins of interest. Fluorescent and control cells were imaged on a microscope using a DSred2 and FITC filter set. The most promising clearing protocols of cell culture experiments were applied to whole xenograft tumour specimens, to test their effectiveness in large unsectioned samples. Fluorescence of TxRed/FITC fluorophores was not found to be significantly affected by any of the test clearing protocols. RFP and GFP fluorescence, however, was found to be significantly greater when cell fixation was in ethanol. Fixation in either PFA or methanol resulted in diminished fluorescence. After ethanol fixation, the RFP and GFP fluorescence proved remarkably robust to subsequent exposure to either methyl salicylate or BABB. The optimized optical clearing procedure of ethanol fixation followed by methyl salicylate clearing preserved the fluorescence of constitutive RFP in whole xenograft tumour specimens, about 1 cc in dimension, indicating successful extension from cell plating experiments to whole tissue samples. Finally, the feasibility of imaging the 3D distribution of viable tumour cells (as indicated by the RFP emission) is demonstrated by optical-ECT imaging of cleared xenograft tumours using an in-house system.

  11. Functional imaging in bulk tissue specimens using optical emission tomography: fluorescence preservation during optical clearing

    International Nuclear Information System (INIS)

    Optical emission computed tomography (optical-ECT) is a technique for imaging the three-dimensional (3D) distribution of fluorescent probes in biological tissue specimens with high contrast and spatial resolution. In optical-ECT, functional information can be imaged by (i) systemic application of functional labels (e.g. fluorophore labelled proteins) and/or (ii) endogenous expression of fluorescent reporter proteins (e.g. red fluorescent protein (RFP), green fluorescent protein (GFP)) in vivo. An essential prerequisite for optical-ECT is optical clearing, a procedure where tissue specimens are made transparent to light by sequential perfusion with fixing, dehydrating and clearing agents. In this study, we investigate clearing protocols involving a selection of common fixing (4% buffered paraformaldehyde (PFA), methanol and ethanol), dehydrating (methanol and ethanol) and clearing agents (methyl salicylate and benzyl-alcohol-benzyl-benzoate (BABB)) in order to determine a 'fluorescence friendly' clearing procedure. Cell culture experiments were employed to optimize the sequence of chemical treatments that best preserve fluorescence. Texas red (TxRed), fluorescein isothiocyanate (FITC), RFP and GFP were tested as fluorophores and fluorescent reporter proteins of interest. Fluorescent and control cells were imaged on a microscope using a DSred2 and FITC filter set. The most promising clearing protocols of cell culture experiments were applied to whole xenograft tumour specimens, to test their effectiveness in large unsectioned samples. Fluorescence of TxRed/FITC fluorophores was not found to be significantly affected by any of the test clearing protocols. RFP and GFP fluorescence, however, was found to be significantly greater when cell fixation was in ethanol. Fixation in either PFA or methanol resulted in diminished fluorescence. After ethanol fixation, the RFP and GFP fluorescence proved remarkably robust to subsequent exposure to either methyl salicylate or BABB. The optimized optical clearing procedure of ethanol fixation followed by methyl salicylate clearing preserved the fluorescence of constitutive RFP in whole xenograft tumour specimens, about 1 cc in dimension, indicating successful extension from cell plating experiments to whole tissue samples. Finally, the feasibility of imaging the 3D distribution of viable tumour cells (as indicated by the RFP emission) is demonstrated by optical-ECT imaging of cleared xenograft tumours using an in-house system

  12. Achromatic registration of quadrature components of the optical spectrum in spectral domain optical coherence tomography

    Energy Technology Data Exchange (ETDEWEB)

    Shilyagin, P A; Gelikonov, G V; Gelikonov, V M; Moiseev, A A; Terpelov, D A [Institute of Applied Physics, Russian Academy of Sciences, Nizhnii Novgorod (Russian Federation)

    2014-07-31

    We have thoroughly investigated the method of simultaneous reception of spectral components with the achromatised quadrature phase shift between two portions of a reference wave, designed for the effective suppression of the 'mirror' artefact in the resulting image obtained by means of spectral domain optical coherence tomography (SD OCT). We have developed and experimentally tested a phase-shifting element consisting of a beam divider, which splits the reference optical beam into the two beams, and of delay lines being individual for each beam, which create a mutual phase difference of ?/2 in the double pass of the reference beam. The phase shift achromatism over a wide spectral range is achieved by using in the delay lines the individual elements with different dispersion characteristics. The ranges of admissible adjustment parameters of the achromatised delay line are estimated for exact and inexact conformity of the geometric characteristics of its components to those calculated. A possibility of simultaneous recording of the close-to-quadrature spectral components with a single linear photodetector element is experimentally confirmed. The suppression of the artefact mirror peak in the OCT-signal by an additional 9 dB relative to the level of its suppression is experimentally achieved when the air delay line is used. Two-dimensional images of the surface positioned at an angle to the axis of the probe beam are obtained with the correction of the 'mirror' artefact while maintaining the dynamic range of the image. (laser biophotonics)

  13. Systematic calibration of an integrated x-ray and optical tomography system for preclinical radiation research

    International Nuclear Information System (INIS)

    Purpose: The cone beam computed tomography (CBCT) guided small animal radiation research platform (SARRP) has been developed for focal tumor irradiation, allowing laboratory researchers to test basic biological hypotheses that can modify radiotherapy outcomes in ways that were not feasible previously. CBCT provides excellent bone to soft tissue contrast, but is incapable of differentiating tumors from surrounding soft tissue. Bioluminescence tomography (BLT), in contrast, allows direct visualization of even subpalpable tumors and quantitative evaluation of tumor response. Integration of BLT with CBCT offers complementary image information, with CBCT delineating anatomic structures and BLT differentiating luminescent tumors. This study is to develop a systematic method to calibrate an integrated CBCT and BLT imaging system which can be adopted onboard the SARRP to guide focal tumor irradiation. Methods: The integrated imaging system consists of CBCT, diffuse optical tomography (DOT), and BLT. The anatomy acquired from CBCT and optical properties acquired from DOT serve as a priori information for the subsequent BLT reconstruction. Phantoms were designed and procedures were developed to calibrate the CBCT, DOT/BLT, and the entire integrated system. Geometrical calibration was performed to calibrate the CBCT system. Flat field correction was performed to correct the nonuniform response of the optical imaging system. Absolute emittance calibration was performed to convert the camera readout to the emittance at the phantom or animal surface, which enabled the direct reconstruction of the bioluminescence source strength. Phantom and mouse imaging were performed to validate the calibration. Results: All calibration procedures were successfully performed. Both CBCT of a thin wire and a euthanized mouse revealed no spatial artifact, validating the accuracy of the CBCT calibration. The absolute emittance calibration was validated with a 650 nm laser source, resulting in a 3.0% difference between simulated and measured signal. The calibration of the entire system was confirmed through the CBCT and BLT reconstruction of a bioluminescence source placed inside a tissue-simulating optical phantom. Using a spatial region constraint, the source position was reconstructed with less than 1 mm error and the source strength reconstructed with less than 24% error. Conclusions: A practical and systematic method has been developed to calibrate an integrated x-ray and optical tomography imaging system, including the respective CBCT and optical tomography system calibration and the geometrical calibration of the entire system. The method can be modified and adopted to calibrate CBCT and optical tomography systems that are operated independently or hybrid x-ray and optical tomography imaging systems

  14. Systematic calibration of an integrated x-ray and optical tomography system for preclinical radiation research

    Energy Technology Data Exchange (ETDEWEB)

    Yang, Yidong, E-mail: yidongyang@med.miami.edu [Department of Radiation Oncology and Molecular Radiation Sciences, Johns Hopkins University School of Medicine, Baltimore, Maryland 21231 and Department of Radiation Oncology, University of Miami School of Medicine, Miami, Florida 33136 (United States); Wang, Ken Kang-Hsin; Wong, John W. [Department of Radiation Oncology and Molecular Radiation Sciences, Johns Hopkins University School of Medicine, Baltimore, Maryland 21231 (United States); Eslami, Sohrab; Iordachita, Iulian I. [Laboratory for Computational Sensing and Robotics, Johns Hopkins University, Baltimore, Maryland 21218 (United States); Patterson, Michael S. [Juravinski Cancer Centre and Department of Medical Physics and Applied Radiation Sciences, McMaster University, Hamilton, Ontario L8S4K1 (Canada)

    2015-04-15

    Purpose: The cone beam computed tomography (CBCT) guided small animal radiation research platform (SARRP) has been developed for focal tumor irradiation, allowing laboratory researchers to test basic biological hypotheses that can modify radiotherapy outcomes in ways that were not feasible previously. CBCT provides excellent bone to soft tissue contrast, but is incapable of differentiating tumors from surrounding soft tissue. Bioluminescence tomography (BLT), in contrast, allows direct visualization of even subpalpable tumors and quantitative evaluation of tumor response. Integration of BLT with CBCT offers complementary image information, with CBCT delineating anatomic structures and BLT differentiating luminescent tumors. This study is to develop a systematic method to calibrate an integrated CBCT and BLT imaging system which can be adopted onboard the SARRP to guide focal tumor irradiation. Methods: The integrated imaging system consists of CBCT, diffuse optical tomography (DOT), and BLT. The anatomy acquired from CBCT and optical properties acquired from DOT serve as a priori information for the subsequent BLT reconstruction. Phantoms were designed and procedures were developed to calibrate the CBCT, DOT/BLT, and the entire integrated system. Geometrical calibration was performed to calibrate the CBCT system. Flat field correction was performed to correct the nonuniform response of the optical imaging system. Absolute emittance calibration was performed to convert the camera readout to the emittance at the phantom or animal surface, which enabled the direct reconstruction of the bioluminescence source strength. Phantom and mouse imaging were performed to validate the calibration. Results: All calibration procedures were successfully performed. Both CBCT of a thin wire and a euthanized mouse revealed no spatial artifact, validating the accuracy of the CBCT calibration. The absolute emittance calibration was validated with a 650 nm laser source, resulting in a 3.0% difference between simulated and measured signal. The calibration of the entire system was confirmed through the CBCT and BLT reconstruction of a bioluminescence source placed inside a tissue-simulating optical phantom. Using a spatial region constraint, the source position was reconstructed with less than 1 mm error and the source strength reconstructed with less than 24% error. Conclusions: A practical and systematic method has been developed to calibrate an integrated x-ray and optical tomography imaging system, including the respective CBCT and optical tomography system calibration and the geometrical calibration of the entire system. The method can be modified and adopted to calibrate CBCT and optical tomography systems that are operated independently or hybrid x-ray and optical tomography imaging systems.

  15. Tomography Reconstruction of Geometry and Refractive Index Profile of Highly Asymmetric Optical Fiber Preforms.

    Czech Academy of Sciences Publication Activity Database

    Sláni?ka, Ji?í; Peterka, Pavel

    Bellingham : SPIE, 2010 - (Müllerová, J.; Senderáková, D.; Jure?ka, S.), 7746O1-7746O6 ISBN 9780819482365. ISSN 0277-786X. - (Proceedings of SPIE. 7746). [17th Slovak-Czech-Polish Optical Conference on Wave and Quantum Aspects of Contemporary Optics . Liptovský Ján (SK), 06.09.2010-10.09.2010] R&D Projects: GA MŠk(CZ) ME10119 Institutional research plan: CEZ:AV0Z20670512 Keywords : optical fiber s * tomography * deflection function Subject RIV: BH - Optics , Masers, Lasers

  16. Theoretical study of Acousto-optical coherence tomography using random phase jumps on US and light

    CERN Document Server

    Gross, Michel; Ramaz, François; Farahi, Salma; Boccara, A C

    2011-01-01

    Acousto-optical coherence tomography (AOCT) is a variant of acousto-optic imaging (also called ultrasonic modulation imaging) that makes it possible to get the z resolution with acoustic and optic continuous wave beams. We describe here theoretically the AOCT effect, and we show that the acousto-optic "tagged photons" remain coherent if they are generated within a specific z region of the sample. We quantify the z selectivity for both the "tagged photon" field and for the Lesaffre et al. [Opt. Express 17, 18211 (2009)] photorefractive signal.

  17. First-harmonic sensitivity functions for a linearised diffusion model of ultrasound-modulated optical tomography

    Science.gov (United States)

    Powell, Samuel; Arridge, Simon R.; Leung, Terence S.

    2015-03-01

    Ultrasound-modulated optical tomography is an emerging biomedical imaging modality which uses the spatially localised acoustically-driven modulation of coherent light as a probe of the structure and optical properties of biological tissues. In this work we model the first-harmonic flux generated by the coupled physics using a simple linearised diffusion-style forward model. We derive analytical expressions for the sensitivity of this measurement type with respect to the optical absorption and scattering coefficients. These correlation measurement density functions can be employed as part of an image-reconstruction procedure capable of reconstructing quantitative images of the optical properties of a medium under investigation.

  18. Mapping coherence in measurement via full quantum tomography of a hybrid optical detector

    CERN Document Server

    Zhang, Lijian; Datta, Animesh; Puentes, Graciana; Lundeen, Jeff S; Jin, Xian-Min; Smith, Brian J; Plenio, Martin B; Walmsley, Ian A

    2012-01-01

    Quantum states and measurements exhibit wave-like --- continuous, or particle-like --- discrete, character. Hybrid discrete-continuous photonic systems are key to investigating fundamental quantum phenomena, generating superpositions of macroscopic states, and form essential resources for quantum-enhanced applications, e.g. entanglement distillation and quantum computation, as well as highly efficient optical telecommunications. Realizing the full potential of these hybrid systems requires quantum-optical measurements sensitive to complementary observables such as field quadrature amplitude and photon number. However, a thorough understanding of the practical performance of an optical detector interpolating between these two regions is absent. Here, we report the implementation of full quantum detector tomography, enabling the characterization of the simultaneous wave and photon-number sensitivities of quantum-optical detectors. This yields the largest parametrization to-date in quantum tomography experiments...

  19. Applying LED in full-field optical coherence tomography for gastrointestinal endoscopy

    Science.gov (United States)

    Yang, Bor-Wen; Wang, Yu-Yen; Juan, Yu-Shan; Hsu, Sheng-Jie

    2015-08-01

    Optical coherence tomography (OCT) has become an important medical imaging technology due to its non-invasiveness and high resolution. Full-field optical coherence tomography (FF-OCT) is a scanning scheme especially suitable for en face imaging as it employs a CMOS/CCD device for parallel pixels processing. FF-OCT can also be applied to high-speed endoscopic imaging. Applying cylindrical scanning and a right-angle prism, we successfully obtained a 360° tomography of the inner wall of an intestinal cavity through an FF-OCT system with an LED source. The 10-?m scale resolution enables the early detection of gastrointestinal lesions, which can increase detection rates for esophageal, stomach, or vaginal cancer. All devices used in this system can be integrated by MOEMS technology to contribute to the studies of gastrointestinal medicine and advanced endoscopy technology.

  20. Optical coherence tomography in papilledema and pseudopapilledema with and without optic nerve head drusen

    Directory of Open Access Journals (Sweden)

    Shikha Talwar Bassi

    2014-01-01

    Full Text Available Aim: To compare the spectral domain optical coherence tomography (SD-OCT findings of the optic disc and the peripapillary retina of patients with a true papilledema and pseudopapilledema with and without optic nerve head drusen (ONHD. Study Design: Retrospective Case Control Study. Subjects and Methods: Peripapillary retinal nerve fiber layer (PPRNFL thickness as depicted by SD-OCT of 94 eyes of 66 patients with papilledema (30 eyes, pseudopapiledema (31 eyes, and normal controls (33 eyes was analyzed. The mean RNFL thickness, total retinal thickness (TRT at a superior and inferior edge of the disc and the quadrant wise topography of increased RNFL were compared in all three groups. Sensitivity, specificity, and area under the receiver operating characteristic curve (AROC were calculated for all the parameters. Results: The median RNFL thickness was 185.4 (129.5-349.3 ?m, 122.3 (109-156.3 ?m and 91.62 ± 7 ?m in papilledema, pseudopapilledema, and controls, respectively. Papilledema group had thicker PPRNFL in all quadrants except temporal quadrant. TRT was thicker in papilledema and pseudopapilledema compared to controls. ONHD could be directly visualized as high reflective clumps in the sub-retinal space or the RNFL in 30 eyes. Increased RNFL thickness in all four quadrants was noted 43.3% in papilledema and 9.7% in pseudopapilledema. Normal RNFL thickness in all four quadrants was noted in 0% in papilledema and 32.3% in pseudopapilledema. Nasal RNFL had the highest AROC (0.792 indicating high diagnostic ability to differentiate papilledema from pseudopapilledema. Conclusion: SD-OCT can be used as a tool to differentiate between papilledema and pseudopapilledema.

  1. Diagnostic value of optical coherence tomography for intracranial pressure in idiopathic intracranial hypertension

    DEFF Research Database (Denmark)

    Skau, M; Yri, H; Sander, B; Gerds, TA; Milea, D; Jensen, R

    2013-01-01

    BACKGROUND: Idiopathic intracranial hypertension (IIH) is a condition of raised intracranial pressure (ICP) in the absence of space-occupying lesions or other known etiology. It primarily affects young obese females, and potentially causes permanent visual loss due to papilledema and secondary optic atrophy. The aim of this study was to evaluate the diagnostic value of optical coherence tomography (OCT) as a marker for CSF opening pressure in patients with idiopathic intracranial hypertension (I...

  2. Broadband Fourier domain mode-locked laser for optical coherence tomography at 1060 nm

    DEFF Research Database (Denmark)

    Marschall, Sebastian; Klein, Thomas; Wieser, Wolfgang; Torzicky, Teresa; Pircher, Michael; Biedermann, Benjamin R.; Pedersen, Christian; Hitzenberger, Christoph K.; Huber, Robert; Andersen, Peter E.

    2012-01-01

    Optical coherence tomography (OCT) in the 1060nm range is interesting for in vivo imaging of the human posterior eye segment (retina, choroid, sclera) due to low absorption in water and deep penetration into the tissue. Rapidly tunable light sources, such as Fourier domain mode-locked (FDML) lasers, enable acquisition of densely sampled three-dimensional datasets covering a wide field of view. However, semiconductor optical amplifiers (SOAs)-the typical laser gain media for swept sources-for the...

  3. An algorithm for simulating image formation in optical coherence tomography for cylinder scattering

    Science.gov (United States)

    Brenner, Thomas; Reitzle, Dominik; Kienle, Alwin

    2015-07-01

    An algorithm for the simulation of Fourier domain optical coherence tomography (OCT) images of a cylinder based on an analytical solution of Maxwell's equations is presented. The characteristics of the simulated OCT signal are discussed and the whispering gallery modes as well as the geometrical optics signals from the cylinder are identified. An OCT scanner with an incident Gaussian beam is implemented to simulate two-dimensional B-scans.

  4. Swept source / Fourier domain polarization sensitive optical coherence tomography with a passive polarization delay unit

    OpenAIRE

    Baumann, Bernhard; Choi, WooJhon; Potsaid, Benjamin; Huang, David; DUKER, JAY S.; Fujimoto, James G.

    2012-01-01

    Polarization sensitive optical coherence tomography (PS-OCT) is a functional imaging method that provides additional contrast using the light polarizing properties of a sample. This manuscript describes PS-OCT based on ultrahigh speed swept source / Fourier domain OCT operating at 1050nm at 100kHz axial scan rates using single mode fiber optics and a multiplexing approach. Unlike previously reported PS-OCT multiplexing schemes, the method uses a passive polarization delay unit and does not re...

  5. Pump-probe quantum state tomography in a semiconductor optical amplifier.

    Science.gov (United States)

    Grosse, N B; Owschimikow, N; Aust, R; Lingnau, B; Koltchanov, A; Kolarczik, M; Lüdge, K; Woggon, U

    2014-12-29

    Pump-probe quantum state tomography was applied to the transmission of a coherent state through an In(Ga)As based quantum dot optical amplifier during the interaction with an optical pump pulse. The Wigner function and the statistical moments of the field were extracted and used to determine the degree of population inversion and the signal-to-noise ratio in a sub-picosecond time window. PMID:25607214

  6. Acousto-optical coherence tomography with a digital holographic detection scheme

    OpenAIRE

    Benoit A La Guillaume, Emilie; Farahi, Salma; Bossy, Emmanuel; Gross, Michel; Ramaz, François

    2012-01-01

    Acousto-optical coherence tomography (AOCT) consists in using random phase jumps on ultrasound and light to achieve a millimeter resolution when imaging thick scattering media. We combined this technique with heterodyne off-axis digital holography. Two-dimensional images of absorbing objects embedded in scattering phantoms are obtained with a good signal-to-noise ratio. We study the impact of the phase modulation characteristics on the amplitude of the acousto-optic signal a...

  7. Cerebral blood flow imaged with ultrahigh-resolution optical coherence angiography and Doppler tomography

    OpenAIRE

    Ren, Hugang; Du, Congwu; Pan, Yingtian

    2012-01-01

    Speckle contrast based optical coherence angiography (OCA) and optical coherence Doppler tomography (ODT) have been applied to image cerebral blood flow previously. However, the contrast mechanisms of these two methods are not fully studied. Here, we present both flow phantom and in vivo animal experiments using ultrahigh-resolution OCA (?OCA) and ODT (?ODT) to investigate the flow sensitivity differences between these two methods. Our results show that the high sensitivity of ?OCA for visual...

  8. Reconstruction methods for sound visualization based on acousto-optic tomography

    DEFF Research Database (Denmark)

    Torras Rosell, Antoni; Lylloff, Oliver; Barrera Figueroa, Salvador; Jacobsen, Finn

    2013-01-01

    The visualization of acoustic fields using acousto-optic tomography has recently proved to yield satisfactory results in the audible frequency range. The current implementation of this visualization technique uses a laser Doppler vibrometer (LDV) to measure the acousto-optic effect, that is, the interaction between sound and light, over an aperture where the acoustic field is to be investigated. By identifying the relationship between the apparent velocity of the LDV and the Radon transform of t...

  9. Derivation of a Monte Carlo method for modeling heterodyne detection in optical coherence tomography systems

    DEFF Research Database (Denmark)

    Tycho, Andreas; Jørgensen, Thomas Martini; Andersen, Peter E.

    2002-01-01

    A Monte Carlo (MC) method for modeling optical coherence tomography (OCT) measurements of a diffusely reflecting discontinuity emb edded in a scattering medium is presented. For the first time to the authors' knowledge it is shown analytically that the applicability of an MC approach to this optical geometry is firmly justified, because, as we show, in the conjugate image plane the field reflected from the sample is delta-correlated from which it follows that the heterodyne signal is calculated ...

  10. Crystal Optical Properties of Inhomogeneous Plates and the Problems of Polarization Tomography of Photoelastic Materials

    OpenAIRE

    Kushnir O.; Nek P.; Vlokh R.; Kukhtarev N

    2007-01-01

    Using the Jones matrix formalism, crystal optical properties of inhomogeneous material consisting of a pile of weakly birefringent plates are analysed in relation to the cell model adopted in polarization tomography of 3D dielectric tensor field in photoelastic media. It is shown that the material manifests in general an "apparent" optical gyration caused by different orientations of the plates. Relations between the polarimetric parameters and the dielectric tensor componen...

  11. Optical coherence tomography diagnostics for onco–urology. Review of clinical perspectives

    OpenAIRE

    Sergiy Kharchenko; Jan Adamowicz; Maciej Wojtkowski; Tomasz Drewa

    2013-01-01

    Introduction. Optical coherence tomography (OCT) is being investigated widely for use in urologic pathology. The current imaging of urogenital cancers cannot be perfect, thus, routine methods demands new updates or inventions of alternative radiological scope. OCT presents so–called “live” optical biopsy. The authors aim to review this modality for uro–oncological purposes.Matherial and methods. A series of 37 publications between 1989 and 2012 was selected and cited from GoogleScholar and Pu...

  12. Optical Coherence Tomography and Biomolecular Imaging with Coherent Raman Scattering Microscopy

    DEFF Research Database (Denmark)

    Andersson-Engels, Stefan; Andersen, Peter E.

    2014-01-01

    The Special Section on Selected Topics in Biophotonics: Optical Coherence Tomography and Biomolecular Imaging with Coherent Raman Scattering Microscopy comprises two invited review papers and several contributed papers from the summer school Biophotonics ’13, as well as contributed papers within this general scope.

  13. Optical coherence tomography based on intensity correlations of quasi-thermal light

    OpenAIRE

    Zerom, Petros; Piredda, Giovanni; Boyd, Robert W.; Shapiro, Jeffrey H.

    2009-01-01

    We show theoretically that the longitudinal resolution of conventional optical coherence tomography can be improved by a factor of radic2 when a two-photon (as opposed to a single-photon) sensitive detector is used, and we present preliminary supporting results.

  14. Consensus standards for acquisition, measurement, and reporting of intravascular optical coherence tomography studies

    DEFF Research Database (Denmark)

    Tearney, Guillermo J; Regar, Evelyn; Akasaka, Takashi; Adriaenssens, Tom; Barlis, Peter; Bezerra, Hiram G; Bouma, Brett; Bruining, Nico; Cho, Jin-Man; Chowdhary, Saqib; Costa, Marco A; de Silva, Ranil; Dijkstra, Jouke; Di Mario, Carlo; Dudeck, Darius; Falk, Erling; Feldman, Marc D; Fitzgerald, Peter; Garcia, Hector Hernan Caro; Gonzalo, Nieves; Granada, Juan F; Guagliumi, Giulio; Holm, Niels Ramsing; Honda, Yasuhiro; Ikeno, Fumiaki; Kawasaki, Masanori; Kochman, Janusz; Koltowski, Lukasz; Kubo, Takashi; Kume, Teruyoshi; Kyono, Hiroyuki; Lam, Cheung Chi Simon; Lamouche, Guy; Lee, David P; Leon, Martin B; Maehara, Akiko; Manfrini, Olivia; Mintz, Gary S; Mizuno, Kyiouchi; Morel, Marie-Angéle; Nadkarni, Seemantini; Okura, Hiroyuki; Otake, Hiromasa; Pietrasik, Arkadiusz; Prati, Francesco; Räber, Lorenz; Radu, Maria D; Rieber, Johannes; Riga, Maria; Rollins, Andrew; Rosenberg, Mireille; Sirbu, Vasile; Serruys, Patrick W J C; Shimada, Kenei; Shinke, Toshiro; Shite, Junya; Siegel, Eliot; Sonada, Shinjo; Suter, Melissa; Takarada, Shigeho; Tanaka, Atsushi; Terashima, Mitsuyasu; Troels, Thim; Uemura, Shiro; Ughi, Giovanni J; van Beusekom, Heleen M M; van der Steen, Antonius F W; van Es, Gerrit-Ann; van Soest, Gijs; Virmani, Renu; Waxman, Sergio; Weissman, Neil J; Weisz, Giora

    2012-01-01

    The purpose of this document is to make the output of the International Working Group for Intravascular Optical Coherence Tomography (IWG-IVOCT) Standardization and Validation available to medical and scientific communities, through a peer-reviewed publication, in the interest of improving the diagnosis and treatment of patients with atherosclerosis, including coronary artery disease.

  15. Combined dynamic and static optical tomography for prediction of treatment outcome in breast cancer patients

    Science.gov (United States)

    Gunther, Jacqueline; Lim, Emerson; Kim, Hyun Keol; Flexman, Molly; Zweck, Lukas; Arora, Sindhiya; Refice, Susan; Brown, Mindy; Kalinsky, Kevin; Hershman, Dawn; Hielscher, Andreas H.

    2015-07-01

    We explored evidence that a combination of dynamic and static diffuse optical tomography can be used to predict treatment response in patients undergoing neo adjuvant chemotherapy. Both blood chromophore concentrations and hemodynamic signatures were measured over the 5-month course of treatment.

  16. The utility of three-dimensional optical projection tomography in nerve injection injury imaging.

    Czech Academy of Sciences Publication Activity Database

    Cvetko, E.; ?apek, Martin; Damjanovska, M.; Reina, M. A.; Eržen, I.; Stopar-Pintari?, T.

    2015-01-01

    Ro?. 70, ?. 8 (2015), s. 939-947. ISSN 0003-2409 R&D Projects: GA ?R(CZ) GA13-12412S; GA MŠk(CZ) LH13028 Institutional support: RVO:67985823 Keywords : optical projection tomography * 3D nerve visualization * nerve disruption Subject RIV: EA - Cell Biology Impact factor: 3.382, year: 2014

  17. Multisensor coordinate measuring technology. Dimensional metrology using optics, tactile sensing and X-ray tomography

    International Nuclear Information System (INIS)

    This booklet gives a comprehensive and lucid introduction to the technical fundamentals of multisensor coordinate measuring technology as available at the time of writing (2013). Its emphasis is on optic, tactile and X-ray tomography sensors, but it also provides in-depth coverage of important aspects of measuring device technology and its applications as well as accuracy and economic efficiency.

  18. Optimizing magnetomotive contrast of SPIO-labeled platelets for thrombosis imaging in optical coherence tomography

    OpenAIRE

    Oldenburg, Amy L; Spivak, Dmitry; Wu, Gongting; Tsui, Frank; Fischer, Thomas H

    2012-01-01

    Rehydratable, lyophilized platelets loaded with superparamagnetic iron oxides (SPIOs) has the potential to provide magnetomotive imaging contrast to sites of vascular damage, including thrombosis complicating atherosclerosis and hemorrhage. Magnetomotive optical coherence tomography (MMOCT) contrasts SPIO-platelets based on their nanoscale, magnetically-induced motion. We report improvements in MMOCT imaging contrast and sensitivity by optimizing the magnetic properties and SPIO loading of th...

  19. Complete Two-dimensional Muellermetric Imaging of Biological Tissue Using Heterodyned Optical Coherence Tomography

    CERN Document Server

    Liu, Xue; Shahriar, M S

    2010-01-01

    A polarization-sensitive optical coherence tomography system based on heterodyning and filtering techniques is built to perform Stokesmetric imaging of different layers of depths in a porcine tendon sample. The complete 4\\times4 backscattering Muellermetric images of one layer are acquired using such a system. The images reveal information indiscernible from a conventional OCT system.

  20. Polarization Sensitive Optical Coherence Tomography for Blood Glucose Monitoring in Human Subjects

    CERN Document Server

    Solanki, Jitendra; Sen, Pratima; Andrews, Joseph Thomas

    2012-01-01

    A device based on Polarization sensitive optical coherence tomography is developed to monitor blood glucose levels in human subjects. The device was initially tested with tissue phantom. The measurements with human subjects for various glucose concentration levels are found to be linearly dependent on the degree of circular polarization obtainable from the PS-OCT.

  1. Optical coherence tomography: Monte Carlo simulation and improvement by optical amplification

    DEFF Research Database (Denmark)

    Tycho, Andreas

    2002-01-01

    An advanced novel Monte Carlo simulation model of the detection process of an optical coherence tomography (OCT) system is presented. For the first time it is shown analytically that the applicability of the incoherent Monte Carlo approach to model the heterodyne detection process of an OCT system is firmly justified. This is obtained by calculating the heterodyne mixing of the reference and sample beams in a plane conjugate to the discontinuity in the sample probed by the system. Using this approach, a novel expression for the OCT signal is derived, which only depends uopon the intensity distribution of the light from the sample and the reference beam. To adequately estimate the intensity distributions, a novel method of modeling a focused Gaussian beam using Monte Carlo simulation is developed. This method is then combined with the derived expression for the OCT signal into a new Monte Carlo model of the OCT signal. The OCT signal from a scattering medium are obtained for several beam and sample geometries using the new Monte Carlo model, and when comparing to results of an analytical model based on the extended Huygens-Fresnel principle excellent agreement is obtained. With the greater flexibility of Monte Carlo simulations, this new model is demonstrated to be excellent as a numerical phantom, i.e., as a substitute for otherwise difficult experiments. Finally, a new model of the signal-to-noise ratio (SNR) of an OCT system with optical amplification of the light reflected from the sample is derived, and discussed. Using this model, the conclusion is reached that an optical amplifier will enable substantial improvement of the SNR for OCT systems dominated by receiver noise. Receiver noise is of practical concern because of the (often) limited irradiance of suitable optical sources for OCT, and high insertion loss of the fast optical delay-line scanners that are necessary for fast imaging. Correspondingly, an increase in penetration depth of about 30-100% is demonstrated for OCT imaging in skin based on resultsobtained with the new Monte Carlo model. Accordingly, the two new models are demonstrated as valuable tools for future development and optimization of OCT systems to extend the applications of the system in biomedicine.

  2. Adaptive-optics optical coherence tomography for high-resolution and high-speed 3D retinal in vivo imaging

    OpenAIRE

    Zawadzki, Robert J.; Jones, Steven M; Olivier, Scot S.; Zhao, Mingtao; Bower, Bradley A.; Izatt, Joseph A.; Choi, Stacey; Laut, Sophie; Werner, John S.

    2005-01-01

    We have combined Fourier-domain optical coherence tomography (FD-OCT) with a closed-loop adaptive optics (AO) system using a Hartmann-Shack wavefront sensor and a bimorph deformable mirror. The adaptive optics system measures and corrects the wavefront aberration of the human eye for improved lateral resolution (~4 ?m) of retinal images, while maintaining the high axial resolution (~6 ?m) of stand alone OCT. The AO-OCT instrument enables the three-dimensional (3D) visualization of different r...

  3. Optical 3D-storage in sol-gel materials with a reading by Optical Coherence Tomography-technique

    CERN Document Server

    Reyes-Esqueda, J A; Lecaque, R; Ramaz, F; Forget, B C; Dubois, A; Briat, B; Boccara, C; Roger, G; Canva, M; Levy, Y; Chaput, F; Boilot, J P; Reyes-Esqueda, Jorge-Alejandro; Vabre, Laurent; Lecaque, Romain; Ramaz, Francois; Forget, Benoit C.; Dubois, Arnaud; Briat, Bernard; Boccara, Claude; Roger, Gisele; Canva, Michael; Levy, Yves; Chaput, Frederic; Boilot, Jean-Pierre

    2003-01-01

    We report on the recording of 3D optical memories in sol-gel materials by using a non-linear absorption effect. This effect induces a local change of the optical properties of the material which is read and quantified with a high resolution full-field Optical Coherence Tomography setup. It is the first time that this technique is used for this purpose. Data recording was performed by focused picosecond (ps) single-pulse irradiation at 1064 nm with energy densities of 10 and 33 J/cm2 per pulse.

  4. In-situ monitoring of surface post-processing in large aperture fused silica optics with Optical Coherence Tomography

    Energy Technology Data Exchange (ETDEWEB)

    Guss, G M; Bass, I l; Hackel, R P; Mailhiot, C; Demos, S G

    2008-02-08

    Optical Coherence Tomography is explored as a method to image laser-damage sites located on the surface of large aperture fused silica optics during post-processing via CO{sub 2} laser ablation. The signal analysis for image acquisition was adapted to meet the sensitivity requirements for this application. A long-working distance geometry was employed to allow imaging through the opposite surface of the 5-cm thick optic. The experimental results demonstrate the potential of OCT for remote monitoring of transparent material processing applications.

  5. Tomography

    International Nuclear Information System (INIS)

    Tomography is a non-invasive technique now being developed as an industrial tool. It will be most useful for studying complex geometries where other NDT techniques provide ambiguous information, and complex processes where the quantitative data obtained can be used to rigorously test our understanding of the process. An overview of the CRNL program is presented

  6. Photons-based medical imaging - Radiology, X-ray tomography, gamma and positrons tomography, optical imaging; Imagerie medicale a base de photons - Radiologie, tomographie X, tomographie gamma et positons, imagerie optique

    Energy Technology Data Exchange (ETDEWEB)

    Fanet, H.; Dinten, J.M.; Moy, J.P.; Rinkel, J. [CEA Leti, Grenoble (France); Buvat, I. [IMNC - CNRS, Orsay (France); Da Silva, A. [Institut Fresnel, Marseille (France); Douek, P.; Peyrin, F. [INSA Lyon, Lyon Univ. (France); Frija, G. [Hopital Europeen George Pompidou, Paris (France); Trebossen, R. [CEA-Service hospitalier Frederic Joliot, Orsay (France)

    2010-07-01

    This book describes the different principles used in medical imaging. The detection aspects, the processing electronics and algorithms are detailed for the different techniques. This first tome analyses the photons-based techniques (X-rays, gamma rays and visible light). Content: 1 - physical background: radiation-matter interaction, consequences on detection and medical imaging; 2 - detectors for medical imaging; 3 - processing of numerical radiography images for quantization; 4 - X-ray tomography; 5 - positrons emission tomography: principles and applications; 6 - mono-photonic imaging; 7 - optical imaging; Index. (J.S.)

  7. Experimental study of z resolution in acousto-optical coherence tomography using random phase jumps on ultrasound and light

    OpenAIRE

    Lesaffre, Max; Farahi, Salma; Ramaz, François; Gross, Michel

    2013-01-01

    Acousto-Optical Coherence Tomography (AOCT) is a variant of Acousto Optic Imaging (also called Ultrasound modulated Optical Tomography) that makes possible to get resolution along the ultrasound propagation axis $z$. We present here new AOCT experimental results, and we study how the $z$ resolution depends on time step between phase jumps $T_\\phi$, or on the correlation length $\\Delta z$. By working at low resolution, we perform a quantitative comparison of the $z$ measureme...

  8. Smart optical coherence tomography for ultra-deep imaging through highly scattering media

    CERN Document Server

    Badon, Amaury; Lerosey, Geoffroy; Boccara, Albert C; Fink, Mathias; Aubry, Alexandre

    2015-01-01

    Multiple scattering of waves in disordered media is a nightmare whether it be for detection or imaging purposes. The best approach so far to get rid of multiple scattering is optical coherence tomography. It basically combines confocal microscopy and coherence time-gating to discriminate ballistic photons from a predominant multiple scattering background. Nevertheless, the imaging depth range remains limited to 1 mm at best in human soft tissues. Here we propose a matrix approach of optical imaging to push back this fundamental limit. By combining a matrix discrimination of ballistic waves and iterative time-reversal, we show both theoretically and experimentally an extension of the imaging-depth limit by at least a factor two compared to optical coherence tomography. In particular, the reported experiment demonstrates imaging through a strongly scattering layer from which only one reflected photon over 1000 billion is ballistic. This approach opens a new route towards ultra-deep tissue imaging.

  9. A soft deformable tissue-equivalent phantom for diffuse optical tomography

    International Nuclear Information System (INIS)

    A recipe is presented for the manufacture of highly compressible phantoms for diffuse optical tomography. The recipe is based on polyvinyl alcohol (PVA) slime, a viscoelastic fluid which readily deforms under moderate pressure. Scattering particles and absorbing compounds can be added to provide a uniform material with stable and reproducible optical properties. A linear relationship between the concentration of scattering particles (either titanium dioxide or microspheres) and the transport scatter coefficient is demonstrated. Phantoms of an arbitrary size and shape may be produced by containing the slime within a thin latex shell, and a stability over a period of at least 3 months has been established. The deformable phantoms may be used to test and calibrate optical tomography systems designed for use on patients with irregular or variable geometries

  10. A soft deformable tissue-equivalent phantom for diffuse optical tomography

    Science.gov (United States)

    Hebden, Jeremy C.; Price, Ben D.; Gibson, Adam P.; Royle, Gary

    2006-11-01

    A recipe is presented for the manufacture of highly compressible phantoms for diffuse optical tomography. The recipe is based on polyvinyl alcohol (PVA) slime, a viscoelastic fluid which readily deforms under moderate pressure. Scattering particles and absorbing compounds can be added to provide a uniform material with stable and reproducible optical properties. A linear relationship between the concentration of scattering particles (either titanium dioxide or microspheres) and the transport scatter coefficient is demonstrated. Phantoms of an arbitrary size and shape may be produced by containing the slime within a thin latex shell, and a stability over a period of at least 3 months has been established. The deformable phantoms may be used to test and calibrate optical tomography systems designed for use on patients with irregular or variable geometries.

  11. Test target for characterizing 3D resolution of optical coherence tomography

    Science.gov (United States)

    Hu, Zhixiong; Hao, Bingtao; Liu, Wenli; Hong, Baoyu; Li, Jiao

    2014-12-01

    Optical coherence tomography (OCT) is a non-invasive 3D imaging technology which has been applied or investigated in many diagnostic fields including ophthalmology, dermatology, dentistry, cardiovasology, endoscopy, brain imaging and so on. Optical resolution is an important characteristic that can describe the quality and utility of an image acquiring system. We employ 3D printing technology to design and fabricate a test target for characterizing 3D resolution of optical coherence tomography. The test target which mimics USAF 1951 test chart was produced with photopolymer. By measuring the 3D test target, axial resolution as well as lateral resolution of a spectral domain OCT system was evaluated. For comparison, conventional microscope and surface profiler were employed to characterize the 3D test targets. The results demonstrate that the 3D resolution test targets have the potential of qualitatively and quantitatively validating the performance of OCT systems.

  12. Tomography

    International Nuclear Information System (INIS)

    Tomography is a non-intrusive imaging technique being developed at CRNL as an industrial tool for generating quantitative cross-sectional density maps of objects. Of most interest is tomography's ability to: distinguish features within complex geometries where other NDT techniques fail because of the complexity of the geometry; detect/locate small density changes/defects within objects, e.g. void fraction measurements within thick-walled vessels, shrink cavities in castings, etc.; provide quantitative data that can be used in analyses, e.g. of complex processes, or fracture mechanics; and provide objective quantitative data that can be used for (computer-based) quality assurance decisions, thereby reducing and in some cases eliminating the present subjectivity often encountered in NDT. The CRNL program is reviewed and examples are presented to illustrate the potential and the limitations of the technology

  13. Reconstruction Method for Optical Tomography Based on the Linearized Bregman Iteration with Sparse Regularization.

    Science.gov (United States)

    Leng, Chengcai; Yu, Dongdong; Zhang, Shuang; An, Yu; Hu, Yifang

    2015-01-01

    Optical molecular imaging is a promising technique and has been widely used in physiology, and pathology at cellular and molecular levels, which includes different modalities such as bioluminescence tomography, fluorescence molecular tomography and Cerenkov luminescence tomography. The inverse problem is ill-posed for the above modalities, which cause a nonunique solution. In this paper, we propose an effective reconstruction method based on the linearized Bregman iterative algorithm with sparse regularization (LBSR) for reconstruction. Considering the sparsity characteristics of the reconstructed sources, the sparsity can be regarded as a kind of a priori information and sparse regularization is incorporated, which can accurately locate the position of the source. The linearized Bregman iteration method is exploited to minimize the sparse regularization problem so as to further achieve fast and accurate reconstruction results. Experimental results in a numerical simulation and in vivo mouse demonstrate the effectiveness and potential of the proposed method. PMID:26421055

  14. Reconstruction Method for Optical Tomography Based on the Linearized Bregman Iteration with Sparse Regularization

    Science.gov (United States)

    Leng, Chengcai; Yu, Dongdong; Zhang, Shuang; An, Yu; Hu, Yifang

    2015-01-01

    Optical molecular imaging is a promising technique and has been widely used in physiology, and pathology at cellular and molecular levels, which includes different modalities such as bioluminescence tomography, fluorescence molecular tomography and Cerenkov luminescence tomography. The inverse problem is ill-posed for the above modalities, which cause a nonunique solution. In this paper, we propose an effective reconstruction method based on the linearized Bregman iterative algorithm with sparse regularization (LBSR) for reconstruction. Considering the sparsity characteristics of the reconstructed sources, the sparsity can be regarded as a kind of a priori information and sparse regularization is incorporated, which can accurately locate the position of the source. The linearized Bregman iteration method is exploited to minimize the sparse regularization problem so as to further achieve fast and accurate reconstruction results. Experimental results in a numerical simulation and in vivo mouse demonstrate the effectiveness and potential of the proposed method. PMID:26421055

  15. In vivo imaging of zebrafish from embryo to adult stage with optical projection tomography

    Science.gov (United States)

    Bassi, Andrea; Fieramonti, Luca; D'Andrea, Cosimo; Valentini, Gianluca; Cubeddu, Rinaldo; De Silvestri, Sandro; Cerullo, Giulio; Foglia, Efrem; Cotelli, Franco

    2013-02-01

    Optical Projection Tomography (OPT) is a three dimensional imaging technique that is particularly suitable for studying millimeter sized biological samples and organisms. Similarly to x-ray computed tomography, OPT is based on the acquisition of a sequence of images taken through the sample at many angles (projections). Assuming the linearity of the optical absorption process, the projections are combined to reconstruct the 3-D volume of the sample, typically using a filtered back-projection algorithm. OPT has been applied to in-vivo imaging of zebrafish (Danio rerio). The instrument and the protocol for in vivo imaging of zebrafish embryos and juvenile specimens are described. Light scattering remains a challenge for in vivo OPT, especially when samples at the upper size limit, like zebrafish at the adult stage, are under study. We describe Time-Gated Optical Projection Tomography (TGOPT), a technique able to reconstruct adult zebrafish internal structures by counteracting the scattering effects through a fast time-gate. The time gating mechanism is based on non-linear optical upconversion of an infrared ultrashort laser pulse and allows the detection of quasi-ballistic photons within a 100 fs temporal gate. This results in a strong improvement in contrast and resolution with respect to conventional OPT. Artifacts in the reconstructed images are reduced as well. We show that TGOPT is suited for imaging the skeletal system and nervous structures of adult zebrafish.

  16. Sagittal laser optical tomography for imaging of rheumatoid finger joints

    International Nuclear Information System (INIS)

    We present a novel optical tomographic imaging system that was designed to determine two-dimensional spatial distribution of optical properties in a sagittal plane through finger joints. The system incorporates a single laser diode and a single silicon photodetector into a scanning device that records spatially resolved light intensities as they are transmitted through a finger. These data are input to a model-based iterative image reconstruction (MOBIIR) scheme, which uses the equation of radiative transfer (ERT) as a forward model for light propagation through tissue. We have used this system to obtain tomographic images of six proximal interphalangeal finger joints from two patients with rheumatoid arthritis. The optical images were compared to clinical symptoms and ultrasound images

  17. Hand scanning optical coherence tomography imaging using encoder feedback.

    Science.gov (United States)

    Iftimia, Nicusor; Maguluri, Gopi; Chang, Ernest W; Chang, Shing; Magill, John; Brugge, William

    2014-12-15

    We present a new method for generating micron-scale OCT images of interstitial tissue with a hand scanning probe and a linear optical encoder that senses probe movement relative to a fixed reference point, i.e., tissue surface. Based on this approach, we demonstrate high resolution optical imaging of biological tissues through a very long biopsy needle. Minor artifacts caused by tissue noncompliance are corrected using a software algorithm which detects the simple repetition of the adjacent A-scans. This hand-scanning OCT imaging approach offers the physician the freedom to access imaging sites of interest repeatedly. PMID:25503002

  18. Quantum Process Tomography of an Optically-Controlled Kerr Non-linearity

    CERN Document Server

    Kupchak, Connor; Jordaan, Bertus; Figueroa, Eden

    2015-01-01

    Any optical quantum information processing machine would be comprised of fully-characterized constituent devices for both single state manipulations and tasks involving the interaction between multiple quantum optical states. Ideally for the latter, would be an apparatus capable of deterministic optical phase shifts that operate on input quantum states with the action mediated solely by auxiliary signal fields. Here we present the complete experimental characterization of a system designed for optically controlled phase shifts acting on single-photon level probe coherent states. Our setup is based on a warm vapor of rubidium atoms under the conditions of electromagnetically induced transparency with its dispersion properties modified through the use of an optically triggered N-type Kerr non-linearity. We fully characterize the performance of our device by sending in a set of input probe states and measuring the corresponding output via balanced homodyne tomography and subsequently performing the technique of ...

  19. Quantum Process Tomography of an Optically-Controlled Kerr Non-linearity.

    Science.gov (United States)

    Kupchak, Connor; Rind, Samuel; Jordaan, Bertus; Figueroa, Eden

    2015-01-01

    Any optical quantum information processing machine would be comprised of fully-characterized constituent devices for both single state manipulations and tasks involving the interaction between multiple quantum optical states. Ideally for the latter, would be an apparatus capable of deterministic optical phase shifts that operate on input quantum states with the action mediated solely by auxiliary signal fields. Here we present the complete experimental characterization of a system designed for optically controlled phase shifts acting on single-photon level probe coherent states. Our setup is based on a warm vapor of rubidium atoms under the conditions of electromagnetically induced transparency with its dispersion properties modified through the use of an optically triggered N-type Kerr non-linearity. We fully characterize the performance of our device by sending in a set of input probe states and measuring the corresponding output via time-domain homodyne tomography and subsequently performing the technique of coherent state quantum process tomography. This method provides us with the precise knowledge of how our optical phase shift will modify any arbitrary input quantum state engineered in the mode of the reconstruction. PMID:26585904

  20. Finite elements parameterization of optical tomography with the radiative transfer equation in frequency domain

    International Nuclear Information System (INIS)

    Optical tomography is a technique of probing semi-transparent media with the help of light sources. In this method, the spatial distribution of the optical properties inside the probed medium is reconstructed by minimizing a cost function based on the errors between the measurements and the predictions of a numerical model of light transport (also called forward/direct model) within the medium at the detectors locations. Optical tomography with finite elements methods involves generally continuous formulations where the optical properties are constant per mesh elements. This study proposes a numerical analysis in the parameterization of the finite elements space of the optical properties in order to improve the accuracy and the contrast of the reconstruction. Numerical tests with noised data using the same algorithm show that continuous finite elements spaces give better results than discontinuous ones by allowing a better transfer of the information between the whole computational nodes of the inversion. It is seen that the results are more accurate when the number of degrees of freedom of the finite element space of the optical properties (number of unknowns) is lowered. This shows that reducing the number of unknowns decreases the ill-posed nature of the inverse problem, thus it is a promising way of regularizing the inversion.

  1. Evaluation of the macular architecture of patients operated on from macula-off rhegmatogenous retinal detachment using optical coherence tomography

    International Nuclear Information System (INIS)

    With the support of optical coherence tomography, to evaluate the macular condition of the patients operated on from rhegmatogenous retinal detachment, with detached macula, who underwent buckling surgery and pars plana vitrectomy

  2. Optical design of an optical coherence tomography and multispectral fluorescence imaging endoscope to detect early stage ovarian cancer

    Science.gov (United States)

    Tate, Tyler; Keenan, Molly; Swan, Elizabeth; Black, John; Utzinger, Urs; Barton, Jennifer

    2014-12-01

    The five year survival rate for ovarian cancer is over 90% if early detection occurs, yet no effective early screening method exists. We have designed and are constructing a dual modality Optical Coherence Tomography (OCT) and Multispectral Fluorescence Imaging (MFI) endoscope to optically screen the Fallopian tube and ovary for early stage cancer. The endoscope reaches the ovary via the natural pathway of the vagina, cervix, uterus and Fallopian tube. In order to navigate the Fallopian tube the endoscope must have an outer diameter of 600 ?m, be highly flexible, steerable, tracking and nonperforating. The imaging systems consists of six optical subsystems, two from OCT and four from MFI. The optical subsystems have independent and interrelated design criteria. The endoscope will be tested on realistic tissue models and ex vivo tissue to prove feasibility of future human trials. Ultimately the project aims to provide women the first effective ovarian cancer screening technique.

  3. Theoretical limit of spatial resolution in diffuse optical tomography using a perturbation model

    Energy Technology Data Exchange (ETDEWEB)

    Konovalov, A B; Vlasov, V V [E.I. Zababakhin All-Russian Scientific-Research Institute of Technical Physics, Russian Federal Nuclear Centre, Snezhinsk, Chelyabinsk region (Russian Federation)

    2014-03-28

    We have assessed the limit of spatial resolution of timedomain diffuse optical tomography (DOT) based on a perturbation reconstruction model. From the viewpoint of the structure reconstruction accuracy, three different approaches to solving the inverse DOT problem are compared. The first approach involves reconstruction of diffuse tomograms from straight lines, the second – from average curvilinear trajectories of photons and the third – from total banana-shaped distributions of photon trajectories. In order to obtain estimates of resolution, we have derived analytical expressions for the point spread function and modulation transfer function, as well as have performed a numerical experiment on reconstruction of rectangular scattering objects with circular absorbing inhomogeneities. It is shown that in passing from reconstruction from straight lines to reconstruction using distributions of photon trajectories we can improve resolution by almost an order of magnitude and exceed the accuracy of reconstruction of multi-step algorithms used in DOT. (optical tomography)

  4. Optical coherence tomography and pathological myopia: an update of the literature.

    Science.gov (United States)

    Cicinelli, Maria Vittoria; Pierro, Luisa; Gagliardi, Marco; Bandello, Francesco

    2015-12-01

    The purpose of this paper is to give an updated review of the last clinical entities in pathological myopia proposed by means of new generation optical coherence tomography (OCT), including enhanced depth imaging (EDI-OCT) and swept source OCT (SS-OCT). PubMed and Google engine search were carried out using the terms "pathological myopia" associated with "coherence tomography," "enhanced depth imaging," and "swept source OCT." Latest publications up to Jan 2015 about myopia-related complications, including open-angle chronic glaucoma, peripapillary retinal changes, acquired macular diseases, and choroidal neovascularization, have been reviewed. New OCT technologies have led to a greater insight in pathophysiology of high-grade myopia. However, further investigation is needed in order to prevent irreversible visual loss and optic nerve damage. PMID:26265324

  5. Theoretical limit of spatial resolution in diffuse optical tomography using a perturbation model

    International Nuclear Information System (INIS)

    We have assessed the limit of spatial resolution of timedomain diffuse optical tomography (DOT) based on a perturbation reconstruction model. From the viewpoint of the structure reconstruction accuracy, three different approaches to solving the inverse DOT problem are compared. The first approach involves reconstruction of diffuse tomograms from straight lines, the second – from average curvilinear trajectories of photons and the third – from total banana-shaped distributions of photon trajectories. In order to obtain estimates of resolution, we have derived analytical expressions for the point spread function and modulation transfer function, as well as have performed a numerical experiment on reconstruction of rectangular scattering objects with circular absorbing inhomogeneities. It is shown that in passing from reconstruction from straight lines to reconstruction using distributions of photon trajectories we can improve resolution by almost an order of magnitude and exceed the accuracy of reconstruction of multi-step algorithms used in DOT. (optical tomography)

  6. New variational image decomposition model for simultaneously denoising and segmenting optical coherence tomography images

    Science.gov (United States)

    Duan, Jinming; Tench, Christopher; Gottlob, Irene; Proudlock, Frank; Bai, Li

    2015-11-01

    Optical coherence tomography (OCT) imaging plays an important role in clinical diagnosis and monitoring of diseases of the human retina. Automated analysis of optical coherence tomography images is a challenging task as the images are inherently noisy. In this paper, a novel variational image decomposition model is proposed to decompose an OCT image into three components: the first component is the original image but with the noise completely removed; the second contains the set of edges representing the retinal layer boundaries present in the image; and the third is an image of noise, or in image decomposition terms, the texture, or oscillatory patterns of the original image. In addition, a fast Fourier transform based split Bregman algorithm is developed to improve computational efficiency of solving the proposed model. Extensive experiments are conducted on both synthesised and real OCT images to demonstrate that the proposed model outperforms the state-of-the-art speckle noise reduction methods and leads to accurate retinal layer segmentation.

  7. Flow rate estimation by optical coherence tomography using contrast dilution approach

    Science.gov (United States)

    Štohanzlová, Petra; Kolá?, Radim

    2015-07-01

    This paper describes experiments and methodology for flow rate estimation using optical coherence tomography and dilution method in single fiber setup. The single fiber is created from custom made glass capillary and polypropylene hollow fiber. As a data source, measurements on single fiber phantom with continuous flow of carrier medium and bolus of Intralipid solution as a contrast agent were used using Thorlabs OCT OCS1300SS. The measured data were processed by methods of image processing, in order to precisely align the individual images in the sequence and extract dilution curves from the area inside the fiber. An experiment proved that optical coherence tomography can be used for flow rate estimation by the dilution method with precision around 7%.

  8. Quantitative analysis of the Stratus optical coherence tomography fast macular thickness map reports

    Directory of Open Access Journals (Sweden)

    Domalpally Amitha

    2010-01-01

    Full Text Available The cross sectional optical coherence tomography images have an important role in evaluating retinal diseases. The reports generated by the Stratus fast macular thickness scan protocol are useful for both clinical and research purposes. The centerpoint thickness is an important outcome measure for many therapeutic trials related to macular disease. The data is susceptible to artifacts such as decentration and boundary line errors and could be potentially erroneous. An understanding of how the data is generated is essential before utilizing the data. This article describes the interpretation of the fast macular thickness map report, assessment of the quality of an optical coherence tomography image and identification of the artifacts that could influence the numeric data.

  9. Laser Tomography Adaptive Optics (LTAO): A performance study

    CERN Document Server

    Tatulli, E

    2013-01-01

    We present an analytical derivation of the on-axis performance of Adaptive Optics systems using a given number of guide stars of arbitrary altitude, distributed at arbitrary angular positions in the sky. The expressions of the residual error are given for cases of both continuous and discrete turbulent atmospheric profiles. Assuming Shack-Hartmann wavefront sensing with circular apertures, we demonstrate that the error is formally described by integrals of products of three Bessel functions. We compare the performance of Adaptive Optics correction when using natural, Sodium or Rayleigh laser guide stars. For small diameter class telescopes (~5m), we show that a few number of Rayleigh beacons can provide similar performance to that of a single Sodium laser, for a lower overall cost of the instrument. For bigger apertures, using Rayleigh stars may not be such a suitable alternative because of the too severe cone effect that drastically degrades the quality of the correction.

  10. Full-Field Birefringence Imaging by Thermal-Light Polarization-Sensitive Optical Coherence Tomography. I. Theory

    OpenAIRE

    Moreau, Julien; Loriette, V; Boccara, A.C.

    2003-01-01

    A method for measuring birefringence by use of thermal-light polarization-sensitive optical coherence tomography is presented. The use of thermal light brings to polarization-sensitive optical coherence tomography a resolution in the micrometer range in three dimensions. The instrument is based on a Linnik interference microscope and makes use of achromatic quarter-wave plates. A mathematical representation of the instrument is presented here, and the detection scheme is described, together w...

  11. Posterior chamber compartments demonstrated by optical coherence tomography, in silicone-filled eyes, following macular hole surgery.

    OpenAIRE

    Satchi, K; Patel, CK

    2005-01-01

    PURPOSE: To report visualization with optical coherence tomography of a prefoveal space in silicone oil-filled eyes following surgery for idiopathic macular hole. METHODS: Seven eyes of seven consecutive patients undergoing macular hole surgery with silicone oil tamponade were prospectively evaluated with optical coherence tomography preoperatively, on the first postoperative day, after 6 weeks and before removal of silicone oil. RESULTS: In all seven eyes the posterior face of the silicone o...

  12. In vivo, label-free, three-dimensional quantitative imaging of kidney microcirculation using Doppler optical coherence tomography (DOCT)

    OpenAIRE

    Wierwille, Jeremiah; Andrews, Peter M.; Onozato, Maristela L.; Jiang, James; Cable, Alex; Chen, Yu

    2011-01-01

    Doppler optical coherence tomography (DOCT) is a functional extension of optical coherence tomography (OCT) and is currently being employed in several clinical arenas to quantify blood flow in vivo. In this study, the objective was to investigate the feasibility of DOCT to image kidney microcirculation, specifically, glomerular blood flow. DOCT is able to capture 3D data sets consisting of a series of cross-sectional images in real time, which enables label-free and non-destructive quantifica...

  13. Application of Anterior Segment Optical Coherence Tomography in Pediatric Ophthalmology

    OpenAIRE

    Ricardo Salles Cauduro; Caroline do Amaral Ferraz; Maira Saad Ávila Morales; Patricia Novita Garcia; Yara Cristina Lopes; Paulo Henrique Souza; Norma Allemann

    2012-01-01

    Purpose. Application of anterior segment optical coherence (AS-OCT) in pediatric ophthalmology. Methods. Retrospective clinical study case series of 26 eyes of 19 pediatric patients throughout a 21-month period, presenting anterior segment pathologies, were submitted to AS-OCT examination (OCT Visante, 1310?nm, Zeiss), noncontact technique, no sedation requirement. Results. AS-OCT images were obtained from 19 patients (range: 2 months to 12 years). Clinical diagnosis of anterior segment a...

  14. Sound field reconstruction using acousto-optic tomography

    DEFF Research Database (Denmark)

    Torras Rosell, Antoni; Barrera Figueroa, Salvador; Jacobsen, Finn

    2012-01-01

    When sound propagates through a medium, it results in pressure fluctuations that change the instantaneous density of the medium. Under such circumstances, the refractive index that characterizes the propagation of light is not constant, but influenced by the acoustic field. This kind of interaction is known as the acousto-optic effect. The formulation of this physical phenomenon into a mathematical problem can be described in terms of the Radon transform, which makes it possible to reconstruct a...

  15. Automatic Detection of Glaucoma Using Optical Coherence Tomography Image

    OpenAIRE

    Rengaraj Venkatesh; S.SHENBAGA DEVI; T.R. Ganesh Babu

    2012-01-01

    Glaucoma is an eye disorder in which the optic nerve suffers damage, leading to vision defect in the affected eye(s) and rolling to complete blindness if untreated. It is frequently associated with increased pressure in the fluid of the eye; aqueous humour. Glaucoma often goes undetected until significant damage to the subject’s visual field has occurred. As glaucoma progresses, neural tissues die, the nerve fiber layer thins and the cup-to-disk ratio increases. The conventional techniq...

  16. Brain specificity of diffuse optical imaging: improvements from superficial signal regression and tomography

    OpenAIRE

    AndrewJ Berger; JosephPCulver

    2010-01-01

    Functional near infrared spectroscopy (fNIRS) is a portable monitor of cerebral hemodynamics with wide clinical potential. However, in fNIRS, the vascular signal from the brain is often obscured by vascular signals present in the scalp and skull. In this paper, we evaluate two methods for improving in vivo data from adult human subjects through the use of high-density diffuse optical tomography (DOT). First, we test whether we can extend superficial regression methods (which utilize the multi...

  17. Compensation of optode sensitivity and position errors in diffuse optical tomography using the approximation error approach

    OpenAIRE

    Mozumder, M.; Tarvainen, T.; Arridge, S.R.; Kaipio, J.; V. Kolehmainen

    2013-01-01

    Diffuse optical tomography is highly sensitive to measurement and modeling errors. Errors in the source and detector coupling and positions can cause significant artifacts in the reconstructed images. Recently the approximation error theory has been proposed to handle modeling errors. In this article, we investigate the feasibility of the approximation error approach to compensate for modeling errors due to inaccurately known optode locations and coupling coefficients. The approach is evaluat...

  18. Brain Specificity of Diffuse Optical Imaging: Improvements from Superficial Signal Regression and Tomography

    OpenAIRE

    Gregg, Nicholas M.; White, Brian R.; Zeff, Benjamin W.; Berger, Andrew J.; Culver, Joseph P.

    2010-01-01

    Functional near infrared spectroscopy (fNIRS) is a portable monitor of cerebral hemodynamics with wide clinical potential. However, in fNIRS, the vascular signal from the brain is often obscured by vascular signals present in the scalp and skull. In this paper, we evaluate two methods for improving in vivo data from adult human subjects through the use of high-density diffuse optical tomography (DOT). First, we test whether we can extend superficial regression methods (which utilize the multi...

  19. Clinical use of Optical Coherence Tomography to identify angiographic silent stent thrombosis

    DEFF Research Database (Denmark)

    Steigen, Sonja E.; Holm, Niels Ramsing; Butt, Noreen; Maeng, Michael; Otsuka, Fumiyuki; Virmani, Renu; Ladich, Elena; Steigen, Terje K.

    2014-01-01

    Abstract Objectives: Patients previously treated with coronary stents may suffer an acute coronary syndrome (ACS) without any evidence of thrombus formation on coronary angiography (CAG). This may be due to partial, non-occlusive stent thrombosis with microembolization. In this paper we illustrate possible mechanisms both with Optical coherence tomography (OCT) and histology. Design: We present two cases with ACS from very late stent thrombosis, both previously treated with first generation drug...

  20. In vivo Imaging of Sarcoptes scabiei Infestation Using Optical Coherence Tomography

    DEFF Research Database (Denmark)

    Banzhaf, Christina Alette; Themstrup, Lotte; Ring, Hans Christian; Welzel, Julia; Mogensen, Mette; Jemec, Gregor Borut Ernst

    2013-01-01

    BACKGROUND: Sarcoptes scabiei can be visualized with different imaging tools. Optical coherence tomography (OCT) may have the potential to describe the changes in skin morphology due to scabies infestation and visualize the parasite. METHODS: Five patients from the Departments of Dermatology, Augsburg, Germany, and Roskilde, Denmark, were OCT scanned (VivoSight(®); Michelson Diagnostics Ltd., UK). Mites were identified by epiluminescence and light microscopy to confirm the diagnosis. RESULTS: OC...

  1. Visualization of peripheral pulmonary artery red thrombi utilizing optical coherence tomography

    Energy Technology Data Exchange (ETDEWEB)

    Hong, Cheng; Wang, Wei; Zhong, Nan Shan; Zeng, Guang Qiao; Zhang, Nuo Fu [The First Affiliated Hospital of Guangzhou Medical College, Guangzhou (China)

    2013-10-15

    Optical coherence tomography (OCT) is a new imaging technique capable of obtaining high-resolution intravascular images and has been used in interventional cardiology. However, an application of OCT in pulmonary arteries had seldom been documented. In this case, OCT imaging is performed in peripheral pulmonary arteries and shows mural red thrombi. Subsequently, the red thrombi are aspirated and confirmed by a histological examination. These findings suggest that OCT may be a useful tool to depict peripheral pulmonary artery thrombi.

  2. Optical coherence tomography fast versus regular macular thickness mapping in diabetic retinopathy

    OpenAIRE

    Ceklic, Lala; Maar, Noemi; Neubauer, Aljoscha S

    2008-01-01

    Objective: The purpose of the study was to investigate if absolute values and reproducibility of thickness maps obtained from 2 optical coherence tomography (OCT) scanning protocols, regular high-resolution and fast low-density mode, differ in patients with diabetic macular edema. Methods: A total of 26 consecutive patients undergoing fluorescein angiography and Stratus OCT scanning for the evaluation of diabetic macular edema at the Departments of Ophthalmology in Munich and Vienna were incl...

  3. Autocorrelation optical coherence tomography for mapping transverse particle-flow velocity

    OpenAIRE

    Wang, Yi; Wang, Ruikang

    2010-01-01

    We present an autocorrelation method to quantitatively map transverse particle-flow velocity with a Fourier domain optical coherence tomography system. This method is derived from the intensity fluctuation of the backscattered light modulated by flowing particles. When passing through the probe beam, moving particles encode a transit time into the backscattered light. The slope of the normalized autocorrelation function of the backscattered light is proportional to the transverse velocity. Th...

  4. Optical Coherence Tomography and Its Role in Mohs Micrographic Surgery: A Case Report

    OpenAIRE

    Chan, C. Stanley; Rohrer, Thomas E.

    2012-01-01

    Optical coherence tomography (OCT) is an imaging technology with the potential to provide high-resolution images of the skin non-invasively. With this device, it is possible to identify a host of skin structures including tumors. In this case report, we demonstrate the use of an OCT device in delineating a lateral tumor margin of an ill-defined basal cell carcinoma prior to Mohs micrographic surgery. Following surgery, the OCT images are compared to histologic sections to confirm their accura...

  5. Optical coherence tomography imaging in asymptomatic patients with carotid artery stenosis

    Energy Technology Data Exchange (ETDEWEB)

    Cilingiroglu, Mehmet, E-mail: Mcilingiroglu@yahoo.com [University of Pittsburgh Heart and Vascular Institute, Pittsburgh, PA (United States); Hakeem, Abdul [William Beaumont Hospital, Royal Oak, MI (United States); Feldman, Marc [University of Texas Health Sciences Center at San Antonio, San Antonio, TX (United States); Wholey, Mark [University of Pittsburgh Heart and Vascular Institute, Pittsburgh, PA (United States)

    2013-01-15

    Assessment and treatment plan for asymptomatic patients with carotid stenosis are based on angiography at the present time. However, angiography or other imaging modalities are limited with their resolution to detect high-risk plaque features. Intravascular optical coherence tomography (IVOCT) recently emerged as a novel imaging modality with a unique resolution to identify vulnerable plaque characteristics. We report use of IVOCT in two separate asymptomatic patients with carotid stenosis with two different plaque types.

  6. High-resolution imaging diagnosis of human fetal membrane by three-dimensional optical coherence tomography

    OpenAIRE

    Ren, Hugang; Avila, Cecilia; Kaplan, Cynthia; Pan, Yingtian

    2011-01-01

    Microscopic chorionic pseudocyst (MCP) arising in the chorion leave of the human fetal membrane (FM) is a clinical precursor for preeclampsia which may progress to fatal medical conditions (e.g., abortion) if left untreated. To examine the utility of three-dimensional (3D) optical coherence tomography (OCT) for noninvasive delineation of the morphology of human fetal membranes and early clinical detection of MCP, 60 human FM specimens were acquired from 10 different subjects undergoing term c...

  7. Use of Split Bregman denoising for iterative reconstruction in fluorescence diffuse optical tomography

    OpenAIRE

    2013-01-01

    Fluorescence diffuse optical tomography (fDOT) is a noninvasive imaging technique that makes it possible to quantify the spatial distribution of fluorescent tracers in small animals. fDOT image reconstruction is commonly performed by means of iterative methods such as the algebraic reconstruction technique (ART). The useful results yielded by more advanced l1-regularized techniques for signal recovery and image reconstruction, together with the recent publication of Split Bregman (SB) procedu...

  8. Intraoperative Optical Coherence Tomography Using the RESCAN 700: Preliminary Results in Collagen Crosslinking

    OpenAIRE

    Pahuja, Natasha; Shetty, Rohit; Jayadev, Chaitra; Nuijts, Rudy; Hedge, Bharath; Arora, Vishal

    2015-01-01

    Purpose. To compare the penetration of riboflavin using a microscope-integrated real time spectral domain optical coherence tomography (ZEISS OPMI LUMERA 700 and ZEISS RESCAN 700) in keratoconus patients undergoing accelerated collagen crosslinking (ACXL) between epithelium on (epi-on) and epithelium off (epi-off). Methods. Intraoperative images were obtained during each of the procedures. Seven keratoconus patients underwent epi-on ACXL and four underwent epi-off ACXL. A software tool was de...

  9. Resolving directional ambiguity in dynamic light scattering-based transverse motion velocimetry in optical coherence tomography

    OpenAIRE

    Huang, Brendan K.; Choma, Michael A.

    2014-01-01

    Dynamic Light Scattering-based Optical Coherence Tomography approaches have been successfully implemented to measure total transverse (xy) flow speed, but are unable to resolve directionality. We propose a method to extract directional velocity in the transverse plane by introducing a variable scan bias to our system. Our velocity estimation, which yields the directional velocity component along the scan axis, is also independent of any point spread function calibration. By combining our appr...

  10. Experimental Demonstration of Signal-to-Noise-Ratio Improvement of Fourier-Domain Optical Coherence Tomography

    OpenAIRE

    Blazkiewicz, Paul; Gourlay, P. Malcolm; Tucker, John R.; Rakic, Aleksandar D.; Zvyagin, Andrei V

    2004-01-01

    A recent advance in optical coherence tomography (OCT), termed swept-source OCT, is generalized into a new technique, Fourier-domain OCT. It represents a realization of a full-field OCT system in place of the conventional serial image acquisition in transverse directions typically implemented in "flying-spot" mode. To realize the full-field image acquisition, a Fourier holography system illuminated with a swept-source is employed instead of a Michelson interferometer commonl...

  11. Application of optical coherence tomography and high-frequency ultrasound imaging during noninvasive laser vasectomy

    OpenAIRE

    Cilip, Christopher M.; Allaf, Mohamad E.; Fried, Nathaniel M.

    2012-01-01

    A noninvasive approach to vasectomy may eliminate male fear of complications related to surgery and increase its acceptance. Noninvasive laser thermal occlusion of the canine vas deferens has recently been reported. Optical coherence tomography (OCT) and high-frequency ultrasound (HFUS) are compared for monitoring laser thermal coagulation of the vas in an acute canine model. Bilateral noninvasive laser coagulation of the vas was performed in six dogs (n=12 vasa) using a Ytterbium fiber laser...

  12. Optical coherence tomography—current technology and applications in clinical and biomedical research

    OpenAIRE

    2011-01-01

    Optical coherence tomography (OCT) is a noninvasive imaging technique that provides real-time two- and three-dimensional images of scattering samples with micrometer resolution. By mapping the local reflectivity, OCT visualizes the morphology of the sample. In addition, functional properties such as birefringence, motion, or the distributions of certain substances can be detected with high spatial resolution. Its main field of application is biomedical imaging and diagnostics. In ophthalmolog...

  13. Acousto-optical coherence tomography using random phase jumps on ultrasound and light

    OpenAIRE

    Lesaffre, Max; Farahi, S.; Gross, Michel; Delaye, Philippe; Boccara, Claude; Ramaz, François

    2009-01-01

    Imaging objects embedded within highly scattering media by coupling light and ultrasounds (US) is a challenging approach. In deed, US enable direct access to the spatial localization, though resolution can be poor along their axis (cm). Up to now, several configurations have been studied, giving a millimetric axial resolution by applying to the US a microsecond pulse regime, as is the case with conventional echography. We introduce a new approach called Acousto-Optical Coherence Tomography (A...

  14. Macular thickness measurements in healthy Norwegian volunteers: an optical coherence tomography study

    OpenAIRE

    Sand Trond; Wexler Alexandra; Elsås Tor B

    2010-01-01

    Abstract Background Ethnic, intersubject, interoperator and intermachine differences in measured macular thickness seem to exist. Our purpose was to collect normative macular thickness data in Norwegians and to evaluate the association between macular thickness and age, gender, parity, and contraception status. Methods Retinal thickness was measured by Stratus Optical Coherence Tomography in healthy subjects. Mean macular thickness (MMT) was analyzed by repeated measures ANOVA with three depe...

  15. Endovascular optical coherence tomography intensity kurtosis: visualization of vasa vasorum in porcine carotid artery

    OpenAIRE

    Cheng, Kyle H. Y.; Sun, Cuiru; Vuong, Barry; Lee, Kenneth K. C.; Mariampillai, Adrian; Marotta, Thomas R; Spears, Julian; Montanera, Walter J.; Herman, Peter. R.; Kiehl, Tim-Rasmus; Standish, Beau A.; Yang, Victor X D

    2012-01-01

    Application of speckle variance optical coherence tomography (OCT) to endovascular imaging faces difficulty of extensive motion artifacts inherently associated with arterial pulsations in addition to other physiological movements. In this study, we employed a technique involving a fourth order statistical method, kurtosis, operating on the endovascular OCT intensity images to visualize the vasa vasorum of carotid artery in vivo and identify its flow dynamic in a porcine model. The intensity k...

  16. Compressive Optical Deflectometric Tomography: A Constrained Total-Variation Minimization Approach

    OpenAIRE

    Gonzalez, Adriana; Jacques, Laurent; De Vleeschouwer, Christophe; Antoine, Philippe (ed.)

    2012-01-01

    Optical Deflectometric Tomography (ODT) provides an accurate characterization of transparent materials whose complex surfaces present a real challenge for manufacture and control. In ODT, the refractive index map (RIM) of a transparent object is reconstructed by measuring light deflection under multiple orientations. We show that this imaging modality can be made "compressive", i.e., a correct RIM reconstruction is achievable with far less observations than required by tradi...

  17. Compressive sensing with dispersion compensation on non-linear wavenumber sampled spectral domain optical coherence tomography

    OpenAIRE

    Xu, Daguang; Yong HUANG; Kang, Jin U

    2013-01-01

    We propose a novel compressive sensing (CS) method on spectral domain optical coherence tomography (SDOCT). By replacing the widely used uniform discrete Fourier transform (UDFT) matrix with a new sensing matrix which is a modification of the non-uniform discrete Fourier transform (NUDFT) matrix, it is shown that undersampled non-linear wavenumber spectral data can be used directly in the CS reconstruction. Thus k-space grid filling and k-linear mask calibration which were proposed to obtain ...

  18. Multiple-capillary measurement of RBC speed, flux, and density with optical coherence tomography

    OpenAIRE

    Lee, Jonghwan; Wu, Weicheng; Lesage, Frederic; Boas, David A.

    2013-01-01

    As capillaries exhibit heterogeneous and fluctuating dynamics even during baseline, a technique measuring red blood cell (RBC) speed and flux over many capillaries at the same time is needed. Here, we report that optical coherence tomography can capture individual RBC passage simultaneously over many capillaries located at different depths. Further, we demonstrate the ability to quantify RBC speed, flux, and linear density. This technique will provide a means to monitor microvascular flow dyn...

  19. OPTICAL COHERENCE TOMOGRAPHY HEART TUBE IMAGE DENOISING BASED ON CONTOURLET TRANSFORM

    OpenAIRE

    GUO, QING; SUN, SHUIFA; DONG, FANGMIN; GAO, BRUCE Z.; Wang, Rui

    2012-01-01

    Optical Coherence Tomography(OCT) gradually becomes a very important imaging technology in the Biomedical field for its noninvasive, nondestructive and real-time properties. However, the interpretation and application of the OCT images are limited by the ubiquitous noise. In this paper, a denoising algorithm based on contourlet transform for the OCT heart tube image is proposed. A bivariate function is constructed to model the joint probability density function (pdf) of the coefficient and it...

  20. Simultaneous dual wavelength eye-tracked ultrahigh resolution retinal and choroidal optical coherence tomography

    DEFF Research Database (Denmark)

    Unterhuber, A.; Povaay, B.; Müller, André; Jensen, Ole Bjarlin; Duelk, M.; Le, T.; Petersen, Paul Michael; Velez, C.; Esmaeelpour, M.; Andersen, Peter E.; Drexler, W.

    2013-01-01

    We demonstrate an optical coherence tomography device that simultaneously combines different novel ultrabroad bandwidth light sources centered in the 800 and 1060 nm regions, operating at 66 kHz depth scan rate, and a confocal laser scanning ophthalmoscope-based eye tracker to permit motion-artifact-free, ultrahigh resolution and high contrast retinal and choroidal imaging. The two wavelengths of the device provide the complementary information needed for diagnosis of subtle retinal changes, whi...

  1. Combining Optical Coherence Tomography with Fluorescence Molecular Imaging: Towards Simultaneous Morphology and Molecular Imaging

    OpenAIRE

    Yuan, Shuai; Celeste A. Roney; Wierwille, Jerry; Chen, Chao-Wei; Xu, Biying; Jiang, James; Ma, Hongzhou; Cable, Alex; Summers, Ronald M.; Chen, Yu

    2010-01-01

    Optical coherence tomography (OCT) provides high-resolution, cross-sectional imaging of tissue microstructure in situ and in real-time, while fluorescence molecular imaging (FMI) enables the visualization of basic molecular processes. There are great interests in combining these two modalities so that the tissue's structural and molecular information can be obtained simultaneously. This could greatly benefit biomedical applications such as detecting early diseases and monitoring therapeutic i...

  2. The invasive assessment of coronary atherosclerosis and stents using optical coherence tomography: a clinical update

    OpenAIRE

    Asrar ul Haq, Muhammad; Layland, Jamie; Mutha, Vivek; Barlis, Peter

    2013-01-01

    Ischaemic heart disease (IHD) remains one of the leading causes of death. Atherosclerosis has been intensely researched given the IHD prevalence and the financial impacts on healthcare systems. More recently, in vivo characterisation of coronary atherosclerotic plaque and tissue responses following stent implantation in a coronary artery has been made possible by a novel technology called optical coherence tomography (OCT). OCT is a light-based, invasive, intracoronary imaging modality long a...

  3. Correlation between intraretinal changes in diabetic macular oedema seen in fluorescein angiography and optical coherence tomography

    DEFF Research Database (Denmark)

    Soliman, W.; Sander, B.; Hasler, P.W.; Larsen, Michael

    2008-01-01

    Purpose: To study the relationship between intraretinal optical coherence tomography (OCT) and fluorescein angiography (FA) findings in eyes with diabetic macular oedema (DMO). Methods: We carried out a retrospective observational case series. Thirty eyes with previously untreated DMO underwent FA and OCT. The same ETDRS template was overlaid on the FA images in order to compare OCT and FA. Transfoveal linear high-resolution OCT scans (at the 0- and 90-degree meridians) and FA pictures were comp...

  4. Optical tomography with structured illumination using the three-dimensional FN method

    OpenAIRE

    Machida, Manabu

    2015-01-01

    One way of formulating optical tomography is to use the Born series, which is given by the Green's function for the homogeneous medium. The three-dimensional FN method is a numerical method of obtaining the specific intensity of the radiative transport equation expressed as a superposition of three-dimensional singular eigenfunctions. In this paper, we compute the Green's function for the radiative transport equation using the three-dimensional FN method without making diffu...

  5. Imaging actinic keratosis by high-definition optical coherence tomography. Histomorphologic correlation : a pilot study

    DEFF Research Database (Denmark)

    Boone, Marc A L M; Norrenberg, Sarah

    2013-01-01

    With the continued development of non-invasive therapies for actinic keratosis such as PDT and immune therapies, the non-invasive diagnosis and monitoring become increasingly relevant. High-definition optical coherence tomography is a high-resolution imaging tool, with micrometre resolution in both transversal and axial directions, enable to visualize individual cells up to a depth of around 570 ?m filling the imaging gap between conventional optical coherence tomography and reflectance confocal microscopy. We sought to determine the feasibility of detecting and grading of actinic keratosis by this technique using criteria defined for reflectance confocal microscopy compared to histology. In this pilot study, skin lesions of 17 patients with a histologically proven actinic keratosis were imaged by high-definition optical coherence tomography just before excision and images analysed qualitatively. The surrounding normal looking skin has been used as control group. In lesional skin, dyskeratotic and atypical keratinocytes could be noticed with this new technique. An atypical honeycomb pattern in variable degree or a disarranged epidermal pattern could be observed. A good correlation between the dimension of atypia and/or disarrangement of the spinous-granular layer on en face images and the histopathological grading could be demonstrated. Relevant cross-sectional imaging criteria could be defined for the different histopathological variants of actinic keratoses. The surrounding skin displayed features of photodamage. Using features already suggested by reflectance confocal microscopy, the study implies that high-definition optical coherence tomography facilitates in vivo diagnosis of actinic keratosis and allows the grading of different actinic keratosis lesions for increased clinical utility.

  6. Feasibility and methodology of optical coherence tomography imaging of human intracranial aneurysms: ex vivo pilot study

    Science.gov (United States)

    Vuong, Barry; Sun, Cuiru; Khiel, Tim-Rasmus; Gardecki, Joseph A.; Standish, Beau A.; da Costa, Leodante; de Morais, Josaphat; Tearney, Guillermo J.; Yang, Victor X. D.

    2012-02-01

    Rupture of intracranial aneurysm is a common cause of subarachnoid hemorrhage. An aneurysm may undergo microscopic morphological changes or remodeling of the vessel wall prior to rupture, which could potentially be imaged. In this study we present methods of tissue sample preparation of intracranial aneurysms and correlation between optical coherence tomography imaging and routine histology. OCT has a potential future in the assessment of microscopic features of aneurysms, which may correlate to the risk of rupture.

  7. High-resolution optical coherence tomography visualization of LASIK flap displacement

    OpenAIRE

    Salaroli, Camila Haydée Rosas; Li, Yan; Huang, David

    2009-01-01

    Uneventful myopic laser in situ keratomileusis (LASIK) was performed in both eyes of a 33-year-old woman. Two weeks after LASIK, examination of the left eye revealed flap striae radiating inferonasally from the superior hinge. The flap was relifted and repositioned to remove the irregular astigmatism and reduce the striae. Before the flap was relifted, Fourier-domain optical coherence tomography (FD-OCT) showed the gap at the temporal flap, which had not been detected by biomicroscopy. After ...

  8. Cutting Edge of Traumatic Maculopathy with Spectral-domain Optical Coherence Tomography – A Review

    OpenAIRE

    Mendes, Sílvia; Campos, António; Campos, Joana; Neves, Arminda; Beselga, Diana; Fernandes, Cristina; Castro de Sousa, João Paulo

    2015-01-01

    This article reviews clinically relevant data regarding traumatic maculopathy (TM), frequently observed in clinical practice, especially due to sport or traffic accident injuries. It is characterized by transient gray-whitish retinal coloration and reduction of visual acuity (VA) with closed, blunt object globe trauma of their prior. It may be limited to the posterior pole (Berlin’s edema), or peripheral areas of the retina. Spectral-domain optical coherence tomography (SD-OCT) provides detai...

  9. Intraoperative Pachymetry Using Spectral-Domain Optical Coherence Tomography during Accelerated Corneal Collagen Crosslinking

    OpenAIRE

    Marco Yu; Wong, Victoria W. Y.; Vishal Jhanji; Sayantan Biswas; Chow, Vanissa W. S.

    2013-01-01

    Purpose. To evaluate the role of spectral-domain optical coherence tomography (SDOCT) to measure corneal thickness during accelerated corneal crosslinking (CXL). Methods. Intraoperative pachymetry was performed using SDOCT and ultrasound pachymetry (USP) in 6 eyes of 6 patients with keratoconus. Pachymetry readings were obtained at baseline, after epithelium removal and after 30 minutes of riboflavin instillation. SDOCT measurements of eyes with and without lid speculum during riboflavin inst...

  10. Assessment and in vivo scoring of murine experimental autoimmune uveoretinitis using optical coherence tomography.

    OpenAIRE

    C.J. Chu; Herrmann, P.; Carvalho, L. S.; Liyanage, S. E.; Bainbridge, J. W.; Ali, R.R.; Dick, A. D.; Luhmann, U. F.

    2013-01-01

    Despite advances in clinical imaging and grading our understanding of retinal immune responses and their morphological correlates in experimental autoimmune uveoretinitis (EAU), has been hindered by the requirement for post-mortem histology. To date, monitoring changes occurring during EAU disease progression and evaluating the effect of therapeutic intervention in real time has not been possible. We wanted to establish whether optical coherence tomography (OCT) could detect intraretinal chan...

  11. Optical coherence tomography in the management of acute retinopathy of prematurity.

    OpenAIRE

    Patel, CK

    2006-01-01

    PURPOSE: To demonstrate the microscopic changes, in vivo, accompanying stage 4 retinopathy of prematurity. DESIGN: Interventional case study. METHODS: Optical coherence tomography (OCT) of the macula was performed in a baby with presumed stage 4a retinopathy of prematurity (retinopathy of prematurity). The findings were correlated with clinical staging and video indirect ophthalmoscopy. RESULTS: OCT changed the staging of retinopathy of prematurity from 4a to 4b, demonstrated intraretinal ede...

  12. Development of optical coherence tomography for monitoring the glaucoma laser surgery

    OpenAIRE

    Bayleyegn, Masreshaw-demelash

    2012-01-01

    The ability of optical coherence tomography (OCT) to deliver tomographic images of biological tissues in vivo non-invasively and in real-time has been a growing interest in many biomedical applications, mainly in ophthalmology for imaging the retina and the anterior segment of the eye. However, developing high-resolution OCT for imaging strongly scattering biological tissues like sclera and edematous cornea has still been the main challenge. In this PhD work, an ultrahigh-resolution (< 4 µm) ...

  13. In vivo volumetric imaging of chicken retina with ultrahigh-resolution spectral domain optical coherence tomography

    OpenAIRE

    Moayed, Alireza Akhlagh; Hariri, Sepideh; Song, Eun Sun; Choh, Vivian; Bizheva, Kostadinka

    2011-01-01

    The chicken retina is an established animal model for myopia and light-associated growth studies. It has a unique morphology: it is afoveate and avascular; oxygen and nutrition to the inner retina is delivered by a vascular tissue (pecten) that protrudes into the vitreous. Here we present, to the best of our knowledge, the first in vivo, volumetric high-resolution images of the chicken retina. Images were acquired with an ultrahigh-resolution optical coherence tomography (UHROCT) system with ...

  14. Optical coherence tomography—current technology and applications in clinical and biomedical research

    DEFF Research Database (Denmark)

    Marschall, Sebastian; Sander, Birgit; Mogensen, Mette; Jørgensen, Thomas Martini; Andersen, Peter E.

    2011-01-01

    Optical coherence tomography (OCT) is a noninvasive imaging technique that provides real-time two- and three-dimensional images of scattering samples with micrometer resolution. By mapping the local reflectivity, OCT visualizes the morphology of the sample. In addition, functional properties such as birefringence, motion, or the distributions of certain substances can be detected with high spatial resolution. Its main field of application is biomedical imaging and diagnostics. In ophthalmology, ...

  15. Precise measurement of volume of eccrine sweat gland in mental sweating by optical coherence tomography

    Science.gov (United States)

    Sugawa, Yoshihiko; Fukuda, Akihiro; Ohmi, Masato

    2015-04-01

    We have demonstrated dynamic analysis of the physiological function of eccrine sweat glands underneath skin surface by optical coherence tomography (OCT). In this paper, we propose a method for extraction of the specific eccrine sweat gland by means of the connected component extraction process and the adaptive threshold method, where the en face OCT images are constructed by the swept-source OCT. In the experiment, we demonstrate precise measurement of the volume of the sweat gland in response to the external stimulus.

  16. Pixelation effect removal from fiber bundle probe based optical coherence tomography imaging

    OpenAIRE

    Han, Jae-Ho; Lee, Junghoon; Kang, Jin U

    2010-01-01

    A method of eliminating pixelization effect from en face optical coherence tomography (OCT) image when a fiber bundle is used as an OCT imaging probe is presented. We have demonstrated that applying a histogram equalization process before performing a weighted-averaged Gaussian smoothing filter to the original lower gray level intensity based image not only removes the structural artifact of the bundle but also enhances the image quality with minimum blurring of object’s image features. The m...

  17. Dynamics of Magnetic Nanoparticle-Based Contrast Agents in Tissues Tracked Using Magnetomotive Optical Coherence Tomography

    OpenAIRE

    JOHN, RENU; Chaney, Eric J.; Boppart, Stephen A

    2009-01-01

    Magnetomotive optical coherence tomography (MM-OCT) is an important tool for the visualization and quantitative assessment of magnetic nanoparticles in tissues. In this study, we demonstrate the use of MM-OCT for quantitative measurement of magnetic iron oxide nanoparticle transport and concentration in ex vivo muscle, lung, and liver tissues. The effect of temperature on the dynamics of these nanoparticles is also analyzed. We observe that the rate of transport of nanoparticles in tissues is...

  18. Magnetic and Contrast Properties of Labeled Platelets for Magnetomotive Optical Coherence Tomography

    OpenAIRE

    Oldenburg, Amy L; GALLIPPI, CATERINA M.; Tsui, Frank; Nichols, Timothy C.; Beicker, Kellie N.; Chhetri, Raghav K; Spivak, Dmitry; Richardson, Aaron; Fischer, Thomas H

    2010-01-01

    This article introduces a new functional imaging paradigm that uses optical coherence tomography (OCT) to detect rehydrated, lyophilized platelets (RL platelets) that are in the preclinical trial stage and contain superparamagnetic iron oxides (SPIOs) approved by the U.S. Food and Drug Administration. Platelets are highly functional blood cells that detect and adhere to sites of vascular endothelial damage by forming primary hemostatic plugs. By applying magnetic gradient forces, induced nano...

  19. Structural and functional imaging of 3D microfluidic mixers using optical coherence tomography

    OpenAIRE

    Xi, Chuanwu; Marks, Daniel L.; Parikh, Devang S.; Raskin, Lutgarde; BOPPART, STEPHEN A.

    2004-01-01

    To achieve high mixing efficiency in microfluidic devices, complex designs are often required. Microfluidic devices have been evaluated with light and confocal microscopy, but fluid-flow characteristics at different depths are difficult to separate from the en face images produced. By using optical coherence tomography (OCT), an imaging modality capable of imaging 3D microstructures at micrometer-scale resolutions over millimeter-size scales, we obtained 3D dynamic functional and structural d...

  20. Experimental confirmation of potential swept source optical coherence tomography performance limitations

    OpenAIRE

    Zheng, Kathy; Liu, Bin; Huang, Chuanyong; Brezinski, Mark E.

    2008-01-01

    Optical coherence tomography (OCT) has demonstrated considerable potential for a wide range of medical applications. Initial work was done in the time domain OCT (TD-OCT) approach, but recent interest has been generated with spectral domain OCT (SD-OCT) approaches. While SD-OCT offers higher data acquisition rates and no movable parts, we recently pointed out theoretical inferior aspects to its performance relative to TD-OCT. In this paper we focus on specific limitations of swept source OCT ...

  1. Characteristics of polyacrylamide gel with THPC and Turnbull Blue gel dosimeters evaluated using optical tomography

    International Nuclear Information System (INIS)

    The purpose of this study was to compare characteristics of radiochromic gel – Turnbull Blue gel (TB gel) with polymer gel – polyacrylamide gel and tetrakis hydroxymethyl phosphonium chloride (PAGAT) using optical tomography. Both types of gels were examined in terms of dose sensitivity, dose response linearity and background value of spectrophotometric absorbance. The calibration curve was obtained for 60Co irradiation performed on Gammacell 220 at predefined gamma dose levels between 0 and 140 Gy for TBG and 0–15 Gy for PAGAT. To measure relative dose distributions from stereotactic irradiation, dosimeters were irradiated on Leksell Gamma Knife Perfexion. The cylindrical glass housings filled with gel were attached to the stereotactic frame. They were exposed with single shot and 16 mm collimator by 65 Gy to a 50% prescription isodose for TB gel and 4 Gy to a 50% prescription isodose for PAGAT. Evaluations of dosimeters were performed on an UV–vis Spectrophotometer Helios ? and an optical cone beam homemade tomography scanner with a 16-bit astronomy CCD camera with a set of color filters. The advantages and potential disadvantages for both types of gel dosimeters were summarized. Dose distribution in central slice and measured profiles of 16 mm shot shows excellent correspondence with treatment planning system Leksell GammaPlan® for both PAGAT and Turnbull Blue gels. - highlights: • Gel dosimeters are suitable for steep dose gradient verification. • An optical tomography evaluation method is successful. • Dose response characteristics of TB gel and PAGAT gel are presented

  2. Development of a robust and fast calibration procedure for diffuse optical tomography

    Science.gov (United States)

    Xu, Chen; Li, Hai; Yuan, Guangqian; Vavadi, Hamed; Zhu, Quing

    2015-03-01

    Near infrared (NIR) diffuse optical tomography has demonstrated great potential in the initial diagnosis of tumor and the assessment of tumor vasculature response to neoadjuvant chemotherapy. A fast and robust data processing is critical to move this technique from lab research to bench-side application. Our lab developed frequency-domain diffuse optical tomography system for clinical applications. So far, we still collect data at hospital and do the data processing off-line. In this paper, a robust calibration procedure and fast processing program were developed to overcome this limitation. Because each detection channel had its own electronic delay, the calibration procedure measured amplitude linearity and phase linearity of each channel, and formed a look-up table. The experimental measurements were corrected by the table and the fitting accuracy improved by 45.8%. To further improve the processing speed, the data collection and processing program were converted to C++ from matlab program. The overall processing speed was improved by two times. We expect the new processing program can move diffuse optical tomography one step close to bench-side clinical applications.

  3. Laser tissue coagulation and concurrent optical coherence tomography through a double-clad fiber coupler

    OpenAIRE

    Beaudette, Kathy; Baac, Hyoung Won; Madore, Wendy-Julie; Villiger, Martin; Godbout, Nicolas; Bouma, Brett E.; Boudoux, Caroline

    2015-01-01

    Double-clad fiber (DCF) is herein used in conjunction with a double-clad fiber coupler (DCFC) to enable simultaneous and co-registered optical coherence tomography (OCT) and laser tissue coagulation. The DCF allows a single channel fiber-optic probe to be shared: i.e. the core propagating the OCT signal while the inner cladding delivers the coagulation laser light. We herein present a novel DCFC designed and built to combine both signals within a DCF (>90% of single-mode transmission; >65% mu...

  4. Acousto-optical coherence tomography with a digital holographic detection scheme

    CERN Document Server

    Gross, Michel; Benoit, Emilie; Bossy, Emmanuel; Farahi, Salma; 10.1364/OL.37.003216

    2012-01-01

    Acousto-optical coherence tomography (AOCT) consists in using random phase jumps on ultrasound and light to achieve a millimeter resolution when imaging thick scattering media. We combined this technique with heterodyne off-axis digital holography. Two-dimensional images of absorbing objects embedded in scattering phantoms are obtained with a good signal-to-noise ratio. We study the impact of the phase modulation characteristics on the amplitude of the acousto-optic signal and on the contrast and apparent size of the absorbing inclusion.

  5. Improvement of tissue analysis and classification using optical coherence tomography combined with Raman spectroscopy

    Science.gov (United States)

    Liu, Chih-Hao; Qi, Ji; Lu, Jing; Wang, Shang; Wu, Chen; Shih, Wei-Chuan; Larin, Kirill V.

    2014-02-01

    Optical coherence tomography (OCT) is an optical imaging technique that is capable of performing high-resolution (approaching the histopathology level) and real-time imaging of tissues without use of contrast agents. Based on these advantages, the pathological features of tumors (in micro scale) can be identified during resection surgery. However, the accuracy of tumor margin prediction still needs to be enhanced for assisting the judgment of surgeons. In this regard, we present a two-dimensional computational method for advanced tissue analysis and characterization based on optical coherence tomography (OCT) and Raman spectroscopy (RS). The method combines the slope of OCT intensity signal and the Principal component (PC) of RS, and relies on the tissue optical attenuation and chemical ingredients for the classification of tissue types. Our pilot experiments were performed on mouse kidney, liver and small intestine. Results demonstrate the improvement of the tissue differentiation compared with the analysis only based on the OCT detection. This combined OCT/RS method is potentially useful as a novel optical biopsy technique for cancer detection.

  6. Diffuse optical tomography and spectroscopy of breast cancer and fetal brain

    Science.gov (United States)

    Choe, Regine

    Diffuse optical techniques utilize light in the near infrared spectral range to measure tissue physiology non-invasively. Based on these measurements, either on average or a three-dimensional spatial map of tissue properties such as total hemoglobin concentration, blood oxygen saturation and scattering can be obtained using model-based reconstruction algorithms. In this thesis, diffuse optical techniques were applied for in vivo breast cancer imaging and trans-abdominal fetal brain oxygenation monitoring. For in vivo breast cancer imaging, clinical diffuse optical tomography and related instrumentation was developed and used in several contexts. Bulk physiological properties were quantified for fifty-two healthy subjects in the parallel-plate transmission geometry. Three-dimensional images of breast were reconstructed for subjects with breast tumors and, tumor contrast with respect to normal tissue was found in total hemoglobin concentration and scattering and was quantified for twenty-two breast carcinomas. Tumor contrast and tumor volume changes during neoadjuvant chemotherapy were tracked for one subject and compared to the dynamic contrast-enhanced MRI. Finally, the feasibility for measuring blood flow of breast tumors using optical methods was demonstrated for seven subjects. In a qualitatively different set of experiments, the feasibility for trans-abdominal fetal brain oxygenation monitoring was demonstrated on pregnant ewes with induced fetal hypoxia. Preliminary clinical experiences were discussed to identify future directions. In total, this research has translated diffuse optical tomography techniques into clinical research environment.

  7. Quantum Process Tomography of a Room Temperature Optically-Controlled Phase Shift

    Science.gov (United States)

    Kupchak, Connor; Rind, Samuel; Figueroa, Eden; Stony Brook University Team

    2015-05-01

    We have developed a room temperature setup capable of optically controlled phase shifts on a weak probe field. Our system is realized in a vapor of 87Rb atoms under the conditions of electromagnetically induced transparency utilizing a N-type energy level scheme coupled by three optical fields. By varying the power of the signal field, we can control the size of an optical phase shift experienced by weak coherent state pulses of ~ 1 , propagating through the vapor. We quantify the optical phase shift by measuring the process output via balanced homodyne tomography which provides us with the complete quadrature and phase information of the output states. Furthermore, we measure the output for a set of states over a subspace of the coherent state basis and gain the information to completely reconstruct our phase shift procedure by coherent state quantum process tomography. The reconstruction yields a rank-4 process superoperator which grants the ability to predict how our phase shift process will behave on an arbitrary quantum optical state in the mode of the reconstruction. Our results demonstrate progress towards room temperature systems for possible quantum gates; a key component of a future quantum processor designed to operate at room temperature. US-Navy Office of Naval Research N00141410801, National Science Foundation PHY-1404398, Natural Sciences and Engineering Research Council of Canada.

  8. Angular scan optical coherence tomography imaging and metrology of spherical gradient refractive index preforms.

    Science.gov (United States)

    Yao, Jianing; Meemon, Panomsak; Ponting, Michael; Rolland, Jannick P

    2015-03-01

    The fabrication of high-performance spherical gradient refractive index (S-GRIN) optics requires nondestructive metrology techniques to inspect the samples. We have developed an angular-scan, swept-source-based, Fourier-domain optical coherence tomography (OCT) system centered at 1318 nm with 5 mm imaging depth capable of 180° polar scan and 360° azimuthal scan to investigate polymeric S-GRIN preforms. We demonstrate a method that enables simultaneous mapping of the group optical thickness, physical thickness, the radially-averaged group refractive index, and the transmitted wavefront of the S-GRIN preforms. The angular scan OCT imaging and metrology enables direct visualization, molding uniformity characterization, and optical property evaluations of the preforms. The results on two generations of S-GRIN preforms are discussed that showcase the evolution of the manufacturing process in response to the OCT metrology feedback. PMID:25836863

  9. Simultaneous determination of the tissue light scattering coefficient and Brownian diffusion coefficient using optical coherence tomography

    International Nuclear Information System (INIS)

    Diseased tissue has different optical properties and dynamic behaviors from normal tissue, and this can be exploited for diagnostics and therapeutics. We present a model for simultaneously estimating the optical scattering coefficient and Brownian diffusion coefficient of superficial biological tissue. This theoretical model predicts that the U-quadratic distribution approximates the Lorentzian power spectrum due to the Brownian motion, when the frequency width of integration is much less than the power spectrum linewidth. Furthermore, it shows that the logarithmic intensity of all calculated wavelet frequencies is linearly dependent on the scattering coefficient and the standard deviation of the Doppler frequency shift is linearly dependent on the Brownian diffusion coefficient in the region of the single scattering length. An optical coherence tomography system was used to measure the optical scattering coefficient and the Brownian diffusion coefficient of phantoms. The results of our theoretical model are consistent with the experimental results. Thus, the method has the potential for diagnosis of diseases. (paper)

  10. Theoretical and Experimental Study of Optical Coherence Tomography (OCT) Signals Using an Analytical Transport Model

    International Nuclear Information System (INIS)

    Optical coherence tomography (OCT) is a non-invasive low coherent interferometric technique that provides cross-sectional images of turbid media. OCT is based on the classical Michelson interferometer where the mirror of the reference arm is oscillating and the signal arm contains a biological sample. In this work, we analyzed theoretically the heterodyne optical signal adopting the so called extended Huygens-Fresnel principle (EHFP). We use simulated OCT images with known optical properties to test an algorithm developed by ourselves to recover the scattering coefficient and we recovered the scattering coefficient with a relative error less than 5% for noisy signals. In addition, we applied this algorithm to OCT images from phantoms of known optical properties; in this case curves were indistinguishable. A revision of the validity of the analytical model applied to our system should be done.

  11. Automatic Detection of Glaucoma Using Optical Coherence Tomography Image

    Directory of Open Access Journals (Sweden)

    Rengaraj Venkatesh

    2012-01-01

    Full Text Available Glaucoma is an eye disorder in which the optic nerve suffers damage, leading to vision defect in the affected eye(s and rolling to complete blindness if untreated. It is frequently associated with increased pressure in the fluid of the eye; aqueous humour. Glaucoma often goes undetected until significant damage to the subject’s visual field has occurred. As glaucoma progresses, neural tissues die, the nerve fiber layer thins and the cup-to-disk ratio increases. The conventional techniques typically used for this measurement are unreliable and creates intricacies while measuring considerably small changes in the nerve head geometry. In this study, an algorithm is proposed that facilitates segmentation of the retinal-nerve head vitreal boundary, choroid-nerve head boundary identification and determination of the extent of the optic cup and disk. This algorithm is assessed and evaluated with many samples of OCT images from both normal and pathological eyes. Subsequently, the results are validated with the available documents from expert ophthalmologist reporting the correlation coefficient for cup to disk ratio.

  12. Scatter measurements for optical cone-beam computed tomography

    International Nuclear Information System (INIS)

    Both x-ray and optical cone-beam CT (CBCT) scanners are limited by scattered photons that contaminate the primary images. Transparent radiochromic gels and plastics are anticipated to produce less scattering than polymerization gels and hence result in reconstructed dose distributions with greater contrast and dynamic range. Four methods of scatter measurement were investigated to quantify scatter fractions using an in-house optical CBCT scanner. The methods consisted of generating either 'coin' shadows or primary beamlets in transmission images. The four methods generated similar results of 10% scatter fractions in gel transmission images for this particular scanner configuration with both leuco crystal violet and carbon black micelle gels. The scatter contributions were distributed as 5% from micelle gel, 2% from Teflon wall, 2% from refractive index matching liquid and 1% other sources. Applying a uniform background subtraction of 2% of open field intensity resulted in 0.2% difference between laser CT and cone-beam CT reconstructed attenuation coefficients for a black micelle gel finger phantom.

  13. Optical tomography reconstruction algorithm with the finite element method: An optimal approach with regularization tools

    International Nuclear Information System (INIS)

    Highlights: •New strategies to improve the accuracy of the reconstruction through mesh and finite element parameterization. •Use of gradient filtering through an alternative inner product within the adjoint method. •An integral form of the cost function is used to make the reconstruction compatible with all finite element formulations, continuous and discontinuous. •Gradient-based algorithm with the adjoint method is used for the reconstruction. -- Abstract: Optical tomography is mathematically treated as a non-linear inverse problem where the optical properties of the probed medium are recovered through the minimization of the errors between the experimental measurements and their predictions with a numerical model at the locations of the detectors. According to the ill-posed behavior of the inverse problem, some regularization tools must be performed and the Tikhonov penalization type is the most commonly used in optical tomography applications. This paper introduces an optimized approach for optical tomography reconstruction with the finite element method. An integral form of the cost function is used to take into account the surfaces of the detectors and make the reconstruction compatible with all finite element formulations, continuous and discontinuous. Through a gradient-based algorithm where the adjoint method is used to compute the gradient of the cost function, an alternative inner product is employed for preconditioning the reconstruction algorithm. Moreover, appropriate re-parameterization of the optical properties is performed. These regularization strategies are compared with the classical Tikhonov penalization one. It is shown that both the re-parameterization and the use of the Sobolev cost function gradient are efficient for solving such an ill-posed inverse problem

  14. Numerical and experimental studies of x-ray luminescence optical tomography for small animal imaging

    Science.gov (United States)

    Li, Changqing; Martínez Dávalos, Arnulfo; Cherry, Simon R.

    2013-03-01

    X-ray luminescence optical tomography (XLOT) is an emerging hybrid imaging modality in which x-ray excitable particles (phosphor particles) emit optical photons when stimulated with a collimated x-ray beam. XLOT combines the high sensitivity of optical imaging with the high spatial resolution of x-ray imaging. For XLOT reconstruction, we compared two reconstruction algorithms, conventional filtered backprojection (FBP) and a new algorithm, x-ray luminescence optical tomography with excitation priors (XLOT-EP), in which photon propagation is modeled with the diffusion equation and the x-ray beam positions are used as reconstruction priors. Numerical simulations based on dose calculations are used to validate the proposed XLOT imaging system and the reconstruction algorithms. Simulation results show that XLOT can better detect inclusions of particles than x-ray computed tomography (CT) alone. Nanoparticle concentrations reconstructed with XLOT-EP are much less dependent on target depths than those obtained with FBP. Measurements at just two orthogonal projections are sufficient for the XLOT-EP to reconstruct an XLOT image for simple source distributions. The heterogeneity of x-ray dose distribution is included in the XLOT-EP reconstruction and improves the reconstruction accuracy, suggesting that there is a need to calculate the x-ray dose distribution for experimental XLOT imaging. We have built a prototype XLOT imaging system, in which a collimated x-ray bean is used to scan the samples and an electron multiplying charge couple device (EMCCD) is used to collect the optical photons emitted by the x-ray excitable particles. Phantom experiments have been performed to validate the XLOT system and the proposed reconstruction algorithms.

  15. Spectral-domain optical coherence tomography staging and autofluorescence imaging in achromatopsia.

    Science.gov (United States)

    Greenberg, Jonathan P; Sherman, Jerome; Zweifel, Sandrine A; Chen, Royce W S; Duncker, Tobias; Kohl, Susanne; Baumann, Britta; Wissinger, Bernd; Yannuzzi, Lawrence A; Tsang, Stephen H

    2014-04-01

    IMPORTANCE Evidence is mounting that achromatopsia is a progressive retinal degeneration, and treatments for this condition are on the horizon. OBJECTIVES To categorize achromatopsia into clinically identifiable stages using spectral-domain optical coherence tomography and to describe fundus autofluorescence imaging in this condition. DESIGN, SETTING, AND PARTICIPANTS A prospective observational study was performed between 2010 and 2012 at the Edward S. Harkness Eye Institute, New York-Presbyterian Hospital. Participants included 17 patients (aged 10-62 years) with full-field electroretinography-confirmed achromatopsia. MAIN OUTCOMES AND MEASURES Spectral-domain optical coherence tomography features and staging system, fundus autofluorescence and near-infrared reflectance features and their correlation to optical coherence tomography, and genetic mutations served as the outcomes and measures. RESULTS Achromatopsia was categorized into 5 stages on spectral-domain optical coherence tomography: stage 1 (2 patients [12%]), intact outer retina; stage 2 (2 patients [12%]), inner segment ellipsoid line disruption; stage 3 (5 patients [29%]), presence of an optically empty space; stage 4 (5 patients [29%]), optically empty space with partial retinal pigment epithelium disruption; and stage 5 (3 patients [18%]), complete retinal pigment epithelium disruption and/or loss of the outer nuclear layer. Stage 1 patients showed isolated hyperreflectivity of the external limiting membrane in the fovea, and the external limiting membrane was hyperreflective above each optically empty space. On near infrared reflectance imaging, the fovea was normal, hyporeflective, or showed both hyporeflective and hyperreflective features. All patients demonstrated autofluorescence abnormalities in the fovea and/or parafovea: 9 participants (53%) had reduced or absent autofluorescence surrounded by increased autofluorescence, 4 individuals (24%) showed only reduced or absent autofluorescence, 3 patients (18%) displayed only increased autofluorescence, and 1 individual (6%) exhibited decreased macular pigment contrast. Inner segment ellipsoid line loss generally correlated with the area of reduced autofluorescence, but hyperautofluorescence extended into this region in 2 patients (12%). Bilateral coloboma-like atrophic macular lesions were observed in 1 patient (6%). Five novel mutations were identified (4 in the CNGA3 gene and 1 in the CNGB3 gene). CONCLUSIONS AND RELEVANCE Achromatopsia often demonstrates hyperautofluorescence suggestive of progressive retinal degeneration. The proposed staging system facilitates classification of the disease into different phases of progression and may have therapeutic implications. PMID:24504161

  16. Assessment of optical computed tomography for polymer gel dosimetry

    International Nuclear Information System (INIS)

    Modern radiation therapy particularly with intensity modulation techniques (IMRT) offers the potential to improve patient outcomes by better limiting high doses to the tumour alone. IMRT delivery is technically complex, and precise verification of the resulting three dimensional (3D) dose is required to ensure that the objectives of the treatment are achieved. Currently no convenient dosimetry system exists for such 3D dosimetry. Gel dosimetry can provide the required verification system but is often limited because of access to imaging for dose determination. We present here results from the investigation of cone beam optical CT (optCT) for reading dose information in polymer gel systems. Various polymer gel dosimeters based on polyacrylamide gelatin (PAG) were prepared for this study; including some with the acrylamide replaced by N-vinylFormamide (PVFG), N-isopropyl acrylamide (NIPAM), or diacetone acrylamide (DAAM). The dosimeters incorporated an antioxidant to enable preparation in a conventional fumehood. Phantoms were irradiated with different conformal doses one day after dosimeter preparation with a Cobalt-60 tomotherapy benchtop on an MDS Nordion T-780 unit. Optical CT measurements were made on a prototype cone beam CT scanner (Vista Scanner, Modus Medical, London, ON). The scanner uses LEDs (at 590 or 633 nm) with a diffuser to provide a 9 deg. cone at a 1024x768 pixel, 10-bit, CCD camera. The acquisition time is roughly 8 min and image reconstruction (via a Feldkamp backprojection) takes a further 8 min. Each CT measurement consists of a pre-irradiation scan on the gel dosimeter phantom followed by scanning of the irradiated dosimeter at various times post irradiation. Each polymer gel phantom exhibited clear radiation induced polymerization apparent in visible light. Typical results of the optCT scanning are reviewed and discussed in the individual figure captions. In summary, the optical CT numbers are dose dependent and the reproducibility between multiple scans is very good. Thus, the Vista OptCT scanner with polymer gel dosimeters has the potential for convenient clinical application in IMRT dose-delivery validation. Further characterization is currently underway

  17. Integrated adaptive optics optical coherence tomography and adaptive optics scanning laser ophthalmoscope system for simultaneous cellular resolution in vivo retinal imaging

    OpenAIRE

    Zawadzki, Robert J.; Jones, Steven M; PILLI, SUMAN; Balderas-Mata, Sandra; Kim, Dae Yu; Olivier, Scot S.; Werner, John S.

    2011-01-01

    We describe an ultrahigh-resolution (UHR) retinal imaging system that combines adaptive optics Fourier-domain optical coherence tomography (AO-OCT) with an adaptive optics scanning laser ophthalmoscope (AO-SLO) to allow simultaneous data acquisition by the two modalities. The AO-SLO subsystem was integrated into the previously described AO-UHR OCT instrument with minimal changes to the latter. This was done in order to ensure optimal performance and image quality of the AO- UHR OCT. In this d...

  18. Versatile Wideband Balanced Detector for Quantum Optical Homodyne Tomography

    CERN Document Server

    Kumar, Ranjeet; MacRae, Andrew; Cairns, E; Huntington, E H; Lvovsky, A I

    2011-01-01

    We present a comprehensive theory and an easy to follow method for the design and construction of a wideband homodyne detector for time-domain quantum measurements. We show how one can evaluate the performance of a detector in a specific time-domain experiment based on electronic spectral characteristic of that detector. We then present and characterize a high-performance detector constructed using inexpensive, commercially available components such as low-noise high-speed operational amplifiers and high-bandwidth photodiodes. Our detector shows linear behavior up to a level of over 13 dB clearance between shot noise and electronic noise, in the range from DC to 100 MHz. The detector can be used for measuring quantum optical field quadratures both in the continuous-wave and pulsed regimes with pulse repetition rates up to about 250 MHz.

  19. Spectral-Domain Optical Coherence Tomography for Glaucoma Diagnosis

    Science.gov (United States)

    Gracitelli, Carolina P.B; Abe, Ricardo Y; Medeiros, Felipe A

    2015-01-01

    Identification of structural damage to the optic nerve and retinal nerve fiber layer (RNFL) is an essential component of diagnosis and management of glaucoma. The introduction of spectral-domain OCT (SD-OCT) has allowed objective quantification of damage to these structures with unprecedented resolution. In addition, recent attention has been directed towards imaging the macular area for quantifying loss of neural tissue caused by the disease. Many studies have evaluated and compared the diagnostic accuracies of a variety of parameters that can be obtained from imaging these areas of the ocular fundus. In this article, we critically review the existing literature evaluating the diagnostic accuracy of SD-OCT in glaucoma and we discuss issues related to how SD-OCT results should be incorporated into clinical practice. PMID:26069519

  20. Multiple Object Adaptive Optics: Mixed NGS/LGS tomography

    Science.gov (United States)

    Morris, Tim; Gendron, Eric; Basden, Alastair; Martin, Olivier; Osborn, James; Henry, David; Hubert, Zoltan; Sivo, Gaetano; Gratadour, Damien; Chemla, Fanny; Sevin, Arnaud; Cohen, Matthieu; Younger, Eddy; Vidal, Fabrice; Wilson, Richard; Batterley, Tim; Bitenc, Urban; Reeves, Andrew; Bharmal, Nazim; Raynaud, Henri-François; Kulcsar, Caroline; Conan, Jean-Marc; Guzman, Dani; De Cos Juez, Javier; Huet, Jean-Michel; Perret, Denis; Dickson, Colin; Atkinson, David; Baillie, Tom; Longmore, Andy; Todd, Stephen; Talbot, Gordon; Morris, Simon; Myers, Richard; Rousset, Gérard

    2013-12-01

    Open-loop adaptive optics has been successfully demonstrated on-sky by several groups, including the fully tomographic MOAO demonstration made using CANARY. MOAO instrumentation such as RAVEN will deliver the first astronomical science and other planned instruments aim to extend both open-loop AO performance and the number of corrected fields. Many of these planned systems rely on the use of tomographic open-loop LGS wavefront sensing. Here we present results from the combined NGS/LGS tomographic CANARY system and then compare the NGS- and LGS-based tomographic system performance. We identify the major system performance drivers, and highlight some potential routes for further exploitation of open-loop tomographic AO.

  1. Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging

    International Nuclear Information System (INIS)

    For bioluminescence imaging studies in small animals, it is important to be able to accurately localize the three-dimensional (3D) distribution of the underlying bioluminescent source. The spectrum of light produced by the source that escapes the subject varies with the depth of the emission source because of the wavelength-dependence of the optical properties of tissue. Consequently, multispectral or hyperspectral data acquisition should help in the 3D localization of deep sources. In this paper, we describe a framework for fully 3D bioluminescence tomographic image acquisition and reconstruction that exploits spectral information. We describe regularized tomographic reconstruction techniques that use semi-infinite slab or FEM-based diffusion approximations of photon transport through turbid media. Singular value decomposition analysis was used for data dimensionality reduction and to illustrate the advantage of using hyperspectral rather than achromatic data. Simulation studies in an atlas-mouse geometry indicated that sub-millimeter resolution may be attainable given accurate knowledge of the optical properties of the animal. A fixed arrangement of mirrors and a single CCD camera were used for simultaneous acquisition of multispectral imaging data over most of the surface of the animal. Phantom studies conducted using this system demonstrated our ability to accurately localize deep point-like sources and show that a resolution of 1.5 to 2.2 mm for depths up to 6 mm can be achieved. We also include an in vivo study of a mouse with a brain tumour expressing firefly luciferase. Co-registration of the reconstructed 3D bioluminescent image with magnetic resonance images indicated good anatomical localization of the tumour

  2. Hyperspectral and multispectral bioluminescence optical tomography for small animal imaging

    Energy Technology Data Exchange (ETDEWEB)

    Chaudhari, Abhijit J [Signal and Image Processing Institute, Department of Electrical Engineering-Systems, University of Southern California, Los Angeles, CA 90089 (United States); Darvas, Felix [Signal and Image Processing Institute, Department of Electrical Engineering-Systems, University of Southern California, Los Angeles, CA 90089 (United States); Bading, James R [Department of Radiology, University of Southern California, Los Angeles, CA 90033 (United States); Moats, Rex A [Department of Radiology, University of Southern California, Los Angeles, CA 90033 (United States); Conti, Peter S [Department of Radiology, University of Southern California, Los Angeles, CA 90033 (United States); Smith, Desmond J [Department of Molecular and Medical Pharmacology, UCLA School of Medicine, Los Angeles, CA 90095 (United States); Cherry, Simon R [Department of Biomedical Engineering, University of California-Davis, Davis, CA 95616 (United States); Leahy, Richard M [Signal and Image Processing Institute, Department of Electrical Engineering-Systems, University of Southern California, Los Angeles, CA 90089 (United States)

    2005-12-07

    For bioluminescence imaging studies in small animals, it is important to be able to accurately localize the three-dimensional (3D) distribution of the underlying bioluminescent source. The spectrum of light produced by the source that escapes the subject varies with the depth of the emission source because of the wavelength-dependence of the optical properties of tissue. Consequently, multispectral or hyperspectral data acquisition should help in the 3D localization of deep sources. In this paper, we describe a framework for fully 3D bioluminescence tomographic image acquisition and reconstruction that exploits spectral information. We describe regularized tomographic reconstruction techniques that use semi-infinite slab or FEM-based diffusion approximations of photon transport through turbid media. Singular value decomposition analysis was used for data dimensionality reduction and to illustrate the advantage of using hyperspectral rather than achromatic data. Simulation studies in an atlas-mouse geometry indicated that sub-millimeter resolution may be attainable given accurate knowledge of the optical properties of the animal. A fixed arrangement of mirrors and a single CCD camera were used for simultaneous acquisition of multispectral imaging data over most of the surface of the animal. Phantom studies conducted using this system demonstrated our ability to accurately localize deep point-like sources and show that a resolution of 1.5 to 2.2 mm for depths up to 6 mm can be achieved. We also include an in vivo study of a mouse with a brain tumour expressing firefly luciferase. Co-registration of the reconstructed 3D bioluminescent image with magnetic resonance images indicated good anatomical localization of the tumour.

  3. Tomography

    International Nuclear Information System (INIS)

    Tomography images of a body are constructed by placing a plurality of surface electrodes at spaced intervals on the body, causing currents to flow in the body (e.g. by applying a potential between each pair of electrodes in turn, or by induction), and measuring the potential between pairs of electrodes, calculating the potential expected in each case on the assumption that the body consists of a medium of uniform impedance, plotting the isopotentials corresponding to the calculated results to create a uniform image of the body, obtaining the ratio between the measured potential and the calculated potential in each case, and modifying the image in accordance with the respective ratios by increasing the assumed impedance along an isopotential in proportion to a ratio greater than unity or decreasing the assumed impedance in proportion to a ratio less than unity. The modified impedances along the isopotentials for each pair of electrodes are superimposed. The calculations are carried out using a computer and the plotting is carried out by a visual display unit and/or a print-out unit. (author)

  4. Depth-resolved detection of electrokinetic effects in cartilage using differential phase sensitive optical coherence tomography

    Science.gov (United States)

    Youn, Jong-In; Akkin, Taner; Wong, Brian J. F.; Peavy, George M.; Milner, Thomas E.

    2003-06-01

    Osteoarthritis is a heterogeneous disease characterized by progressive loss of cartilage. The earliest biochemical features, which precede gross pathological changes, include non-uniform loss of proteoglycans associated with increase of water content in tissue and finally, fibrillation of the tissue's collagen network. Loss of proteoglycans decreases the ability of cartilage to withstand compressive loading and makes the tissue softer and more susceptible to wear and fibrilation. If the early loss of proteoglycans is detectable by a non-invasive optical technique, progression of the disease may be arrested using, for example, pharmacologic or surgical intervention. When an electric field is applied to cartilage by an electrical stimulator, the current-generated stress gradients are produced and stress deformation occurs. Since differential phase optical coherence tomography is very sensitive to subsurface stress deformation, we propose to stimulate cartilage electrically and detect stress gradients before gross signs of cartilage degeneration appear. Detection of depth-resolved electromechanical stress gradients in cartilage using differential phase optical coherence tomography may be useful to monitor non-invasively cartilage degeneration. Since the streaming potential and other electrokinetic effects in cartilage are directly proportional to proteoglycan density, application of an electric field in cartilage combined with depth-resolved phase sensitive optical measurements may provide a sensitive indicator of cartilage viability on the molecular-level.

  5. Common Path Side Viewing Monolithic Ball Lens Probe for Optical Coherence Tomography

    Directory of Open Access Journals (Sweden)

    Kanwarpal Singh

    2015-09-01

    Full Text Available Common path probes are highly desirable for optical coherence tomography as they reduce system complexity and cost by eliminating the need of dispersion compensation and polarization controlling optics. In this work, we demonstrate a monolithic ball lens based, common path, side viewing probe that is suitable for Fourier domain optical coherence tomography. The probe design parameters were simulated in Zemax modeling software and the simulated performance parameters were compared with experimental results. We characterized the performance of the probe by measuring its collection efficiency, resolution, and sensitivity. Our results demonstrated that with a source input power of 25 mW, we could achieve sensitivity of 100.5 dB, which is within 7 dB of the maximum possible sensitivity that could be achieved using a separate reference arm. The axial resolution of the system was found to be 15.6 µm in air and the lateral resolution (full width half maximum was approximately 49 µm. The probe optics were assembled in a 1 mm diameter hypotube with a 500 µm inner diameter. Images of finger skin acquired using this probe demonstrated clear visualization of the stratum corneum, epidermis, and papillary dermis, along with sweat ducts.

  6. A laminar optical tomography system for the early cervical cancer diagnosis

    Science.gov (United States)

    Cui, Shanshan; Jia, Mengyu; Chen, Xueying; Meng, Wei; Gao, Feng; Zhao, Huijuan

    2014-03-01

    Laminar optical tomography (LOT) is a new mesoscopic functional optical imaging technique, which is an extension of a confocal microscope and diffuse optical tomography to acquire both the coaxial and off-axis scattered light at the same time. In this paper, a LOT system with a larger detection area aiming at the in vivo detection of early cervical cancer is developed. The field of view of our system is 10 mm x 10 mm. In order to improve the image quality of the system, two methods were performed: the correction of image distortion and the restriction of returning light. The performance of the system with aperture stop was assessed by liquid phantom experiments. Comparing with the Monte Carlo simulation, the measurement results show that the average relative errors of eight different source-detector distances corresponding to 4 source points are lower than the errors of the system taking the frame of objective lens as the aperture stop by 5.7%, 4.8%, 6.1%, 6.1% respectively. Moreover, the experiment based on the phantom with specified structure and optical parameters to simulate the cervix demonstrates that the system perform well for the cervix measurement.

  7. Method of optical coherence tomography with parallel depth-resolved signal reception and fibre-optic phase modulators

    Energy Technology Data Exchange (ETDEWEB)

    Morozov, A N; Turchin, I V [Institute of Applied Physics, Russian Academy of Sciences, Nizhnii Novgorod (Russian Federation)

    2013-12-31

    The method of optical coherence tomography with the scheme of parallel reception of the interference signal (P-OCT) is developed on the basis of spatial paralleling of the reference wave by means of a phase diffraction grating producing the appropriate time delay in the Mach–Zehnder interferometer. The absence of mechanical variation of the optical path difference in the interferometer essentially reduces the time required for 2D imaging of the object internal structure, as compared to the classical OCT that uses the time-domain method of the image construction, the sensitivity and the dynamic range being comparable in both approaches. For the resulting field of the interfering object and reference waves an analytical expression is derived that allows the calculation of the autocorrelation function in the plane of photodetectors. For the first time a method of linear phase modulation by 2? is proposed for P-OCT systems, which allows the use of compact high-frequency (a few hundred kHz) piezoelectric cell-based modulators. For the demonstration of the P-OCT method an experimental setup was created, using which the images of the inner structure of biological objects at the depth up to 1 mm with the axial spatial resolution of 12 ?m were obtained. (optical coherence tomography)

  8. Method of optical coherence tomography with parallel depth-resolved signal reception and fibre-optic phase modulators

    International Nuclear Information System (INIS)

    The method of optical coherence tomography with the scheme of parallel reception of the interference signal (P-OCT) is developed on the basis of spatial paralleling of the reference wave by means of a phase diffraction grating producing the appropriate time delay in the Mach–Zehnder interferometer. The absence of mechanical variation of the optical path difference in the interferometer essentially reduces the time required for 2D imaging of the object internal structure, as compared to the classical OCT that uses the time-domain method of the image construction, the sensitivity and the dynamic range being comparable in both approaches. For the resulting field of the interfering object and reference waves an analytical expression is derived that allows the calculation of the autocorrelation function in the plane of photodetectors. For the first time a method of linear phase modulation by 2? is proposed for P-OCT systems, which allows the use of compact high-frequency (a few hundred kHz) piezoelectric cell-based modulators. For the demonstration of the P-OCT method an experimental setup was created, using which the images of the inner structure of biological objects at the depth up to 1 mm with the axial spatial resolution of 12 ?m were obtained. (optical coherence tomography)

  9. Fluorescence diffuse tomography technique with autofluorescence removal based on dispersion of biotissue optical properties

    International Nuclear Information System (INIS)

    The dispersion of biotissue optical properties results in distortion of the spectrum of radiation during propagation through biotissues. This phenomenon can be used for solving the inverse problem in fluorescence diffuse tomography. We have developed the spectrally resolved fluorescence diffuse tomography (SFDT) technique, which allows reconstruction of the spatial distribution of the fluorophore in biotissue even in the presence of unknown autofluorescence. The experimental setup combining epi-illumination and trans-illumination imaging geometries with spectral resolution has been created. Experimental studies on tissue phantoms and small animals in vivo with the proposed SFDT technique have been conducted. The obtained results have shown high accuracy of the inverse problem solution for spatial distribution of fluorophore concentration. (letter)

  10. Identification of prefrontal cortex (BA10) activation while performing Stroop test using diffuse optical tomography

    Science.gov (United States)

    Khadka, Sabin; Chityala, Srujan R.; Tian, Fenghua; Liu, Hanli

    2011-03-01

    Stroop test is commonly used as a behavior-testing tool for psychological examinations that are related to attention and cognitive control of the human brain. Studies have shown activations in Broadmann area 10 (BA10) of prefrontal cortex (PFC) during attention and cognitive process. The use of diffuse optical tomography (DOT) for human brain mapping is becoming more prevalent. In this study we expect to find neural correlates between the performed cognitive tasks and hemodynamic signals detected by a DOT system. Our initial observation showed activation of oxy-hemoglobin concentration in BA 10, which is consistent with some results seen by positron emission tomography (PET) and functional magnetic resonance imaging (fMRI). Our study demonstrates the possibility of combining DOT with Stroop test to quantitatively investigate cognitive functions of the human brain at the prefrontal cortex.

  11. Fiber-Based Polarization Diversity Detection for Polarization-Sensitive Optical Coherence Tomography

    Directory of Open Access Journals (Sweden)

    Hamid Pahlevaninezhad

    2014-09-01

    Full Text Available We present a new fiber-based polarization diversity detection (PDD scheme for polarization sensitive optical coherence tomography (PSOCT. This implementation uses a new custom miniaturized polarization-maintaining fiber coupler with single mode (SM fiber inputs and polarization maintaining (PM fiber outputs. The SM fiber inputs obviate matching the optical lengths of the two orthogonal OCT polarization channels prior to interference while the PM fiber outputs ensure defined orthogonal axes after interference. Advantages of this detection scheme over those with bulk optics PDD include lower cost, easier miniaturization, and more relaxed alignment and handling issues. We incorporate this PDD scheme into a galvanometer-scanned OCT system to demonstrate system calibration and PSOCT imaging of an achromatic quarter-wave plate, fingernail in vivo, and chicken breast, salmon, cow leg, and basa fish muscle samples ex vivo.

  12. Polarization-based balanced detection for spectral-domain optical coherence tomography.

    Science.gov (United States)

    Black, Adam J; Akkin, Taner

    2015-08-20

    We present a new design for spectral-domain optical coherence tomography that allows balanced detection using a single camera. The design uses polarization optics to encode the light in reference and sample arms. Two parallel and highly aligned spectra, which carry out-of-phase interference signals, in-phase common noise, and auto-interference terms, are focused on the camera, which performs the digital balanced detection for each wavelength. The optical system is characterized and tested for tissue imaging. Results demonstrate consistent signal gains in depth and suppression of DC and sample auto-interference. The design could be further amended for polarization-sensitive imaging and might demonstrate a market for manufacturing dual-line cameras with analog-balanced detection capability. PMID:26368760

  13. Optical coherence tomography in multiple sclerosis and neuromyelitis optica: an update.

    Science.gov (United States)

    Noval, Susana; Contreras, Inés; Muñoz, Silvia; Oreja-Guevara, Celia; Manzano, Beatriz; Rebolleda, Gema

    2011-01-01

    Optical coherence tomography (OCT) uses light interference patterns to produce a cross-sectional image of the retina. It is capable of measuring the unmyelinated axons of the retinal ganglionar cells as they converge on the optic disc. In a disease like multiple sclerosis (MS), in which axonal loss has been identified as an important cause of sustained disability, it may prove an invaluable tool. OCT has demonstrated that axonal loss occurs after each episode of optic neuritis and that the degree of axonal loss is correlated to visual outcomes. Furthermore, axonal loss occurs in MS even in the absence of inflammatory episodes, and the degree of this loss is correlated with the duration of the disease process, with more thinning as the disease advances and in progressive forms. Thus, OCT retinal nerve fiber layer measurements may represent an objective outcome measure with which to evaluate the effect of treatment. PMID:22096638

  14. Prospectively electrocardiogram-triggered high-pitch spiral acquisition coronary computed tomography angiography for assessment of biodegradable vascular scaffold expansion: Comparison with optical coherence tomography

    Energy Technology Data Exchange (ETDEWEB)

    D’Alfonso, Maria Grazia [Interventional Cardiology Unit University Of Florence, Heart and Vessels department, AOU Careggi, Florence (Italy); Mattesini, Alessio, E-mail: amattesini@gmail.com [Interventional Cardiology Unit University Of Florence, Heart and Vessels department, AOU Careggi, Florence (Italy); Meucci, Francesco [Interventional Cardiology Unit University Of Florence, Heart and Vessels department, AOU Careggi, Florence (Italy); Acquafresca, Manlio [Radiology Unit 4, Radiology Department, AOU Careggi, Florence (Italy); Gensini, Gian Franco; Valente, Serafina [Interventional Cardiology Unit University Of Florence, Heart and Vessels department, AOU Careggi, Florence (Italy)

    2014-11-15

    BVS polymeric struts are transparent to the light so that the vessel wall contour can be easily visualized using optical coherence tomography (OCT). Therefore OCT represents a unique tool for both the evaluation of the resorption process and for the assessment of acute BVS mechanical failure. Similarly, the metal-free struts allow unrestricted coronary computed tomography angiography (CCTA), thus this non invasive method might become the gold standard for a non invasive assessment of BVS. In this case we show the ability of CCTA, performed with a low X-Ray dose, to provide a good evaluation of scaffold expansion. The quantitative measurements were in agreement with those obtained with OCT.

  15. Correlations Among Near-Infrared and Short-Wavelength Autofluorescence and Spectral-Domain Optical Coherence Tomography in Recessive Stargardt Disease

    OpenAIRE

    Duncker, Tobias; Marsiglia, Marcela; Lee, Winston; Zernant, Jana; Tsang, Stephen H.; ALLIKMETS, RANDO; Greenstein, Vivienne C.; Sparrow, Janet R.

    2014-01-01

    In recessive Stargardt disease, areas of diminished near-infrared autofluorescence correlated with changes in spectral-domain optical coherence tomography images indicative of ongoing photoreceptor cell degeneration.

  16. Development and Applications of Laminar Optical Tomography for In Vivo Imaging

    Science.gov (United States)

    Burgess, Sean A.

    Laminar optical tomography (LOT) is an optical imaging technique capable of making depth-resolved measurements of absorption and fluorescence contrast in scattering tissue. LOT was first demonstrated in 2004 by Hillman et al [1]. The technique combines a non-contact laser scanning geometry, similar to a low magnification confocal microscope, with the imaging principles of diffuse optical tomography (DOT). This thesis describes the development and application of a second generation LOT system, which acquires both fluorescence and multi-wavelength measurements simultaneously and is better suited for in vivo measurements. Chapter 1 begins by reviewing the interactions of light with tissue that form the foundation of optical imaging. A range of related optical imaging techniques and the basic principles of LOT imaging are then described. In Chapter 2, the development of the new LOT imaging system is described including the implementation of a series of interfaces to allow clinical imaging. System performance is then evaluated on a range of imaging phantoms. Chapter 3 describes two in vivo imaging applications explored using the second generation LOT system, first in a clinical setting where skin lesions were imaged, and then in a laboratory setting where LOT imaging was performed on exposed rat cortex. The final chapter provides a brief summary and describes future directions for LOT. LOT has the potential to find applications in medical diagnostics, surgical guidance, and in-situ monitoring owing to its sensitivity to absorption and fluorescence contrast as well as its ability to provide depth sensitive measures. Optical techniques can characterize blood volume and oxygenation, two important biological parameters, through measurements at different wavelengths. Fluorescence measurements, either from autofluorescence or fluorescent dyes, have shown promise for identifying and analyzing lesions in various epithelial tissues including skin [2, 3], colon [4], esophagus [5, 6], oral mucosa [7, 8], and cervix [9]. The desire to capture these types of measurements with LOT motivated much of the work presented here.

  17. Study of continuous-wave domain fluorescence diffuse optical tomography for quality control on agricultural produce

    Energy Technology Data Exchange (ETDEWEB)

    Nadhira, Vebi, E-mail: vebi@tf.itb.ac.id; Kurniadi, Deddy, E-mail: vebi@tf.itb.ac.id; Juliastuti, E., E-mail: vebi@tf.itb.ac.id; Sutiswan, Adeline, E-mail: vebi@tf.itb.ac.id [Instrumentation and Control Research Group, Faculty of Industrial Technology, Institute Technology of Bandung, Ganesha 10 40132 Bandung (Indonesia)

    2014-03-24

    The importance of monitoring the quality of vegetables and fruits is prosperity by giving a competitive advantage for producer and providing a more healthy food for consumer. Diffuse Optical Tomography (DOT) is offering the possibility to detect the internal defects of the agricultural produce quality. Fluorescence diffuse optical tomography (FDOT) is the development of DOT, offering the possibilities to improve spatial resolution and to contrast image. The purpose of this research is to compare FDOT and DOT in forward analysis with continuous wave approach. The scattering and absorbing parameters of potatoes are used to represent the real condition. The object was illuminated by the NIR source from some positions on the boundary of object. A set of NIR detector are placed on the peripheral position of the object to measure the intensity of propagated or emitted light. In the simulation, we varied a condition of object then we analyzed the sensitivity of forward problem. The result of this study shows that FDOT has a better sensitivity than DOT and a better potential to monitor internal defects of agricultural produce because of the contrast value between optical and fluorescence properties of agricultural produce normal tissue and defects.

  18. Study of continuous-wave domain fluorescence diffuse optical tomography for quality control on agricultural produce

    Science.gov (United States)

    Nadhira, Vebi; Kurniadi, Deddy; Juliastuti, E.; Sutiswan, Adeline

    2014-03-01

    The importance of monitoring the quality of vegetables and fruits is prosperity by giving a competitive advantage for producer and providing a more healthy food for consumer. Diffuse Optical Tomography (DOT) is offering the possibility to detect the internal defects of the agricultural produce quality. Fluorescence diffuse optical tomography (FDOT) is the development of DOT, offering the possibilities to improve spatial resolution and to contrast image. The purpose of this research is to compare FDOT and DOT in forward analysis with continuous wave approach. The scattering and absorbing parameters of potatoes are used to represent the real condition. The object was illuminated by the NIR source from some positions on the boundary of object. A set of NIR detector are placed on the peripheral position of the object to measure the intensity of propagated or emitted light. In the simulation, we varied a condition of object then we analyzed the sensitivity of forward problem. The result of this study shows that FDOT has a better sensitivity than DOT and a better potential to monitor internal defects of agricultural produce because of the contrast value between optical and fluorescence properties of agricultural produce normal tissue and defects.

  19. Reconstruction methods for sound visualization based on acousto-optic tomography

    DEFF Research Database (Denmark)

    Torras Rosell, Antoni; Lylloff, Oliver

    2013-01-01

    The visualization of acoustic fields using acousto-optic tomography has recently proved to yield satisfactory results in the audible frequency range. The current implementation of this visualization technique uses a laser Doppler vibrometer (LDV) to measure the acousto-optic effect, that is, the interaction between sound and light, over an aperture where the acoustic field is to be investigated. By identifying the relationship between the apparent velocity of the LDV and the Radon transform of the acoustic field, it is possible to reconstruct the sound pressure distribution of the scanned area using tomographic techniques. The filtered back projection (FBP) method is the most popular reconstruction algorithm used for tomography in many fields of science. The present study takes the performance of the FBP method in sound visualization as a reference and investigates the use of alternative methods commonly used in inverse problems, e.g., the singular value decomposition and the conjugate gradient methods. A generic formulation for describing the acousto-optic measurement as an inverse problem is thus derived, and the performance of the numerical methods is assessed by means of simulations and experimental results.

  20. Study of continuous-wave domain fluorescence diffuse optical tomography for quality control on agricultural produce

    International Nuclear Information System (INIS)

    The importance of monitoring the quality of vegetables and fruits is prosperity by giving a competitive advantage for producer and providing a more healthy food for consumer. Diffuse Optical Tomography (DOT) is offering the possibility to detect the internal defects of the agricultural produce quality. Fluorescence diffuse optical tomography (FDOT) is the development of DOT, offering the possibilities to improve spatial resolution and to contrast image. The purpose of this research is to compare FDOT and DOT in forward analysis with continuous wave approach. The scattering and absorbing parameters of potatoes are used to represent the real condition. The object was illuminated by the NIR source from some positions on the boundary of object. A set of NIR detector are placed on the peripheral position of the object to measure the intensity of propagated or emitted light. In the simulation, we varied a condition of object then we analyzed the sensitivity of forward problem. The result of this study shows that FDOT has a better sensitivity than DOT and a better potential to monitor internal defects of agricultural produce because of the contrast value between optical and fluorescence properties of agricultural produce normal tissue and defects

  1. All-optically integrated photo-acoustic microscopy and optical coherence tomography based on a single Michelson detector.

    Science.gov (United States)

    Chen, Zhongjiang; Yang, Sihua; Wang, Yi; Xing, Da

    2015-06-15

    An all-optically noncontact dual-mode imaging system using a single Michelson detector that simultaneously achieved photo-acoustic microscopy (PAM) and optical coherence tomography (OCT) is presented. The pulse laser-induced photo-acoustic signals and the back-scattered photons were alternately detected by a single Michelson detector. The spatial resolution and imaging capability of the dual-mode imaging system were testified by scattering phantoms. Furthermore, in vivo images of the mouse ear demonstrated that the PAM-OCT can provide complementary anatomical and functional information for imaging of biological tissues, which could be the best co-imaging strategy of PAM and OCT in biomedicine. PMID:26076275

  2. Noninvasive monitoring of photodynamic therapy on skin neoplastic lesions using the optical attenuation coefficient measured by optical coherence tomography

    Science.gov (United States)

    Goulart, Viviane P.; dos Santos, Moisés O.; Latrive, Anne; Freitas, Anderson Z.; Correa, Luciana; Zezell, Denise M.

    2015-05-01

    Photodynamic therapy (PDT) has become a promising alternative for treatment of skin lesions such as squamous cell carcinoma. We propose a method to monitor the effects of PDT in a noninvasive way by using the optical attenuation coefficient (OAC) calculated from optical coherence tomography (OCT) images. We conducted a study on mice with chemically induced neoplastic lesions and performed PDT on these lesions using homemade photosensitizers. The response of neoplastic lesions to therapy was monitored using, at the same time, macroscopic clinical visualization, histopathological analysis, OCT imaging, and OCT-based attenuation coefficient measurement. Results with all four modalities demonstrated a positive response to treatment. The attenuation coefficient was found to be 1.4 higher in skin lesions than in healthy tissue and it decreased after therapy. This study shows that the OAC is a potential tool to noninvasively assess the evolution of skin neoplastic lesions with time after treatment.

  3. Bone regeneration assessment by optical coherence tomography and MicroCT synchrotron radiation

    Science.gov (United States)

    Negrutiu, Meda L.; Sinescu, Cosmin; Canjau, Silvana; Manescu, Adrian; Topalá, Florin I.; Hoinoiu, Bogdan; Romînu, Mihai; Márcáuteanu, Corina; Duma, Virgil; Bradu, Adrian; Podoleanu, Adrian G.

    2013-06-01

    Bone grafting is a commonly performed surgical procedure to augment bone regeneration in a variety of orthopaedic and maxillofacial procedures, with autologous bone being considered as the "gold standard" bone-grafting material, as it combines all properties required in a bone-graft material: osteoinduction (bone morphogenetic proteins - BMPs - and other growth factors), osteogenesis (osteoprogenitor cells) and osteoconduction (scaffold). The problematic elements of bone regenerative materials are represented by their quality control methods, the adjustment of the initial bone regenerative material, the monitoring (noninvasive, if possible) during their osteoconduction and osteointegration period and biomedical evaluation of the new regenerated bone. One of the research directions was the interface investigation of the regenerative bone materials and their behavior at different time periods on the normal femoral rat bone. 12 rat femurs were used for this investigation. In each ones a 1 mm diameter hole were drilled and a bone grafting material was inserted in the artificial defect. The femurs were removed after one, three and six months. The defects repaired by bone grafting material were evaluated by optical coherence tomography working in Time Domain Mode at 1300 nm. Three dimensional reconstructions of the interfaces were generated. The validations of the results were evaluated by microCT. Synchrotron Radiation allows achieving high spatial resolution images to be generated with high signal-to-noise ratio. In addition, Synchrotron Radiation allows acquisition of volumes at different energies and volume subtraction to enhance contrast. Evaluation of the bone grafting material/bone interface with noninvasive methods such as optical coherence tomography could act as a valuable procedure that can be use in the future in the usual clinical techniques. The results were confirmed by microCT. Optical coherence tomography can be performed in vivo and can provide a qualitative and quantitative evaluation of the bone augmentation procedure.

  4. Quantification of biofilm thickness using a swept source based optical coherence tomography system

    Science.gov (United States)

    Ratheesh Kumar, M.; Murukeshan, V. M.; Seah, L. K.; Shearwood, C.

    2015-07-01

    Optical coherence tomography (OCT) is a non-invasive, non-contact optical measurement and imaging technique that relies on low coherence interferometry. Apart from bio-imaging applications, the applicability of OCT can be extended to metrological investigations because of the inherent capability of optical interferometry to perform precise measurement with high sensitivity. In this paper, we demonstrate the feasibility of OCT for the measurement of the refractive index and thickness of bacterial biofilm structures grown in a flow cell. In OCT, the depth profiles are constructed by measuring the magnitude and time delay of back reflected light from the scattering sites by means of optical interferometry. The optical distance between scattering points can be obtained by measuring the separation between the point spread functions (PSF) at the respective points in the A-scan data. The refractive index of the biofilm is calculated by measuring the apparent shift in the position of the PSF corresponding to a reference surface, caused by the biofilm growth. In our experiment, the base layer of the flow cell is used as the reference surface. It is observed that the calculated refractive index of the biofilm is close to that of water, and agrees well with the previously reported value. Finally, the physical thickness of the biofilm is calculated by dividing the optical path length by the calculated value of refractive index.

  5. Compensation of optode sensitivity and position errors in diffuse optical tomography using the approximation error approach.

    Science.gov (United States)

    Mozumder, Meghdoot; Tarvainen, Tanja; Arridge, Simon R; Kaipio, Jari; Kolehmainen, Ville

    2013-01-01

    Diffuse optical tomography is highly sensitive to measurement and modeling errors. Errors in the source and detector coupling and positions can cause significant artifacts in the reconstructed images. Recently the approximation error theory has been proposed to handle modeling errors. In this article, we investigate the feasibility of the approximation error approach to compensate for modeling errors due to inaccurately known optode locations and coupling coefficients. The approach is evaluated with simulations. The results show that the approximation error method can be used to recover from artifacts in reconstructed images due to optode coupling and position errors. PMID:24156061

  6. Optical coherence tomography following percutaneous coronary intervention with Excimer laser coronary atherectomy

    Energy Technology Data Exchange (ETDEWEB)

    Rawlins, John, E-mail: john.rawlins@doctors.net.uk; Talwar, Suneel; Green, Mark; O’Kane, Peter

    2014-01-15

    The indications for Excimer laser coronary atherectomy (ELCA) have been refined in modern interventional practice. With the expanding role for optical coherence tomography (OCT) providing high-resolution intra-coronary imaging, this article examines the appearance of the coronary lumen after ELCA. Each indication for ELCA is discussed and illustrated with a clinical case, followed by detailed analysis of the OCT imaging pre and post ELCA. The aim of the article is to provide information to interventional cardiologists to facilitate decision making during PCI, when ELCA has been used as part of the interventional strategy.

  7. Tomografia de coerência óptica broncoscópica / Optical coherence tomography in conjunction with bronchoscopy

    Scientific Electronic Library Online (English)

    Ascedio José, Rodrigues; Celso Kiyochi, Takimura; Pedro Alves, Lemos Neto; Viviane Rossi, Figueiredo.

    2012-04-01

    Full Text Available OBJETIVO: Avaliar a viabilidade e o potencial do uso da tomografia de coerência óptica em conjunto com um broncoscópio convencional na avaliação das vias aéreas. MÉTODOS: Estudo piloto baseado em um modelo experimental ex vivo com três animais: um coelho adulto da raça Nova Zelândia e dois suínos da [...] raça Landrace. Um cateter de imagem de tomografia de coerência óptica foi inserido no canal de trabalho de um broncoscópio flexível para alcançarmos a traqueia distal dos animais. As imagens foram obtidas sistematicamente em toda a traqueia ao longo das paredes, partindo da porção distal para a proximal. RESULTADOS: O cateter de imagem se adaptou com facilidade ao canal de trabalho do broncoscópio. Imagens em alta resolução de cortes transversais da traqueia foram obtidas em tempo real, sendo delineadas microestruturas, tais como epitélio, submucosa, cartilagem e camada adventícia nas paredes anteriores e laterais da traqueia. As camadas correspondentes do epitélio, mucosa e cartilagens foram claramente diferenciadas. Na parede posterior, foi possível identificar mucosa, submucosa e musculatura traqueal. CONCLUSÕES: O uso de tomógrafo de coerência óptica em conjunto com um broncoscópio flexível é viável. A tomografia de coerência óptica produz imagens de alta resolução que permitem visualizar a microanatomia da traqueia, inclusive estruturas que normalmente são visualizadas somente na histologia convencional. Abstract in english OBJECTIVE: To evaluate the feasibility of and the potential for using optical coherence tomography in conjunction with conventional bronchoscopy in the evaluation of the airways. METHODS: This was a pilot study based on an ex vivo experimental model involving three animals: one adult New Zealand rab [...] bit and two Landrace pigs. An optical coherence tomography imaging catheter was inserted through the working channel of a flexible bronchoscope in order to reach the distal trachea of the animals. Images of the walls of the trachea were systematically taken along its entire length, from the distal to the proximal portion. RESULTS: The imaging catheter was easily adapted to the working channel of the bronchoscope. High-resolution images of cross sections of the trachea were taken in real time, precisely delineating microstructures, such as the epithelium, submucosa, and cartilage, as well as the adventitia of the anterior and lateral tracheal walls. The corresponding layers of the epithelium, mucosa, and cartilage were clearly differentiated. The mucosa, submucosa, and trachealis muscle were clearly identified in the posterior wall. CONCLUSIONS: It is feasible to use an optical coherence tomography imaging catheter in combination with a flexible bronchoscope. Optical coherence tomography produces high-resolution images that reveal the microanatomy of the trachea, including structures that are typically seen only on images produced by conventional histology.

  8. Advances in clinical application of optical coherence tomography in vitreomacular interface disease

    Directory of Open Access Journals (Sweden)

    Xiao-Li Xing

    2013-08-01

    Full Text Available Vitreous macular interface disease mainly includes vitreomacular traction syndrome, idiopathic macular epiretinal membrane and idiopathic macular hole. Optical coherence tomography(OCTas a new tool that provides high resolution biopsy cross section image non traumatic imaging inspection, has a unique high resolution, no damage characteristics, and hence clinical widely used, vitreous macular interface for clinical disease diagnosis, differential diagnosis and condition monitoring and quantitative evaluation, treatment options, etc provides important information and reference value. Vitreous macular interface disease in OCT image of anatomical morphology characteristics, improve the clinical on disease occurrence and development of knowledge. We reviewed the advances in the application of OCT in vitreomacular interface disease.

  9. Simultaneous dual wavelength eye-tracked ultrahigh resolution retinal and choroidal optical coherence tomography

    DEFF Research Database (Denmark)

    Unterhuber, A.; Povaay, B.

    2013-01-01

    We demonstrate an optical coherence tomography device that simultaneously combines different novel ultrabroad bandwidth light sources centered in the 800 and 1060 nm regions, operating at 66 kHz depth scan rate, and a confocal laser scanning ophthalmoscope-based eye tracker to permit motion-artifact-free, ultrahigh resolution and high contrast retinal and choroidal imaging. The two wavelengths of the device provide the complementary information needed for diagnosis of subtle retinal changes, while also increasing visibility of deeper-lying layers to image pathologies that include opaque media in the anterior eye segment or eyes with increased choroidal thickness.

  10. An elegant technique for ex vivo imaging in experimental research—Optical coherence tomography (OCT)

    DEFF Research Database (Denmark)

    Tschernig, T.; Thrane, Lars

    2013-01-01

    Optical coherence tomography (OCT) is an elegant technology for imaging of tissues and organs and has been established for clinical use for around a decade. Thus, it is used in vivo but can also serve as a valuable ex vivo imaging tool in experimental research. Here, a brief overview is given with a focus on an ex vivo application of OCT. Image and video examples of freshly obtained murine lungs are included. The main advantage of OCT for ex vivo analysis is the non-contact, non-invasive, and non-destructive fast acquisition of a three-dimensional data set with micrometer-resolution.

  11. Towards a one step geometric calibration of an optical coherence tomography

    Science.gov (United States)

    Díaz Díaz, Jesús; Rahlves, Maik; Majdani, Omid; Reithmeier, Eduard; Ortmaier, Tobias

    2012-11-01

    This article presents a one step geometric calibration for an optical coherence tomography (OCT) which forms part of a medical navigation system. The 3D landmark-based geometric calibration with a self-produced 3D reference structure is based on the identification of a parameterized grey-box OCT model. We show in experimental results by comparing common measurement errors in the field of medical surgery before and after calibration, that the proposed methodology reduces systematic errors by more than one order of magnitude. Due to its simplicity, the calibration can be carried out directly before a surgical intervention enhancing the OCT accuracy.

  12. Study on cerebral vascular image of spectral domain optical coherence tomography with compressive sensing

    Directory of Open Access Journals (Sweden)

    Ping Xu

    2013-10-01

    Full Text Available We propose a novel compressed sensing method to retrieve cerebral vascular image for spectral-domain optical coherence tomography (SD OCT. The compressed sensing method based on l1 norm minimization is applied to reconstruct each A-scan data. The proposed method uses about 25% of the total data as required in traditional SD OCT to reconstruct the cerebral angiograpy. Therefore this method is favorable for high speed imaging for cerebral angiograpy. It is shown that the proposed method can achieve better performance of axial resolution and higher signal-to-noise ratio (SNR as compared with the conventional methods.

  13. Real-time dispersion-compensated image reconstruction for compressive sensing spectral domain optical coherence tomography.

    Science.gov (United States)

    Xu, Daguang; Huang, Yong; Kang, Jin U

    2014-09-01

    In this work, we propose a novel dispersion compensation method that enables real-time compressive sensing (CS) spectral domain optical coherence tomography (SD OCT) image reconstruction. We show that dispersion compensation can be incorporated into CS SD OCT by multiplying the dispersion-correcting terms by the undersampled spectral data before CS reconstruction. High-quality SD OCT imaging with dispersion compensation was demonstrated at a speed in excess of 70 frames per s using 40% of the spectral measurements required by the well-known Shannon/Nyquist theory. The data processing and image display were performed on a conventional workstation having three graphics processing units. PMID:25401447

  14. Full-color skin imaging using RGB LED and floating lens in optical coherence tomography

    OpenAIRE

    Yang, Bor-Wen; Chen, Xin-Chang

    2010-01-01

    The cosmetic industry has witnessed significant growth in recent years. Conventional hand-held skin cameras allow for 2D inspection of the skin surface. This paper proposes a new model for full-color 3D imaging of the skin tissue using fiber-based optical coherence tomography (OCT). Compared to laser or LD sources, RGB LED was found more suitable and thus chosen in the low-coherence interferometry due to its wider bandwidth. A floating objective lens was used to confocalize the R, G and B ima...

  15. Ultrahigh-resolution optical coherence tomography for enhanced visualization of retinal pathology

    Science.gov (United States)

    Ko, Tony H.; Drexler, Wolfgang; Paunescu, Lelia A.; Hartl, Ingmar; Ghanta, Ravi K.; Schuman, Joel S.; Fujimoto, James G.

    2003-07-01

    An ultrahigh resolution ophthalmic optical coherence tomography (OCT) system has been developed. Using a femtosecond Ti:sapphire laser light source, which generates bandwidths of ~150 nm at 800 nm, real-time, cross-sectional imaging of the retina with ~3 ?m axial resolution is possible. Ultrahigh resolution OCT images of retinal morphology were obtained in normal subjects and patients with retinal disease. Intraretinal architectural morphology associated with macular diseases such as macular edema, epiretinal membranes, and macular holes can be visualized with unprecedented resolution. Ultrahigh resolution ophthalmic OCT promises to improve the early diagnosis of retinal diseases as well as enable monitoring of disease progression and the efficacy of therapeutic intervention.

  16. Full-field optical coherence tomography (FFOCT) for evaluation of endometrial cancer

    Science.gov (United States)

    Bruhat, Alexis; Combrinck, Marais; Dalimier, Eugénie; Harms, Fabrice; Fine, Jeffrey L.

    2015-02-01

    Full-field optical coherence tomography (FFOCT) quickly produces images that resemble conventional pathology images. We examined endometrium in an intra-operative like fashion (more than forty samples). FFOCT-imaged endometrium was recognizable to pathologists and compared favorably with microscopy of the same samples. Additional image enhancements and acquisition techniques were explored and may improve interpretation accuracy. Wider evaluation of images is ongoing, using more pathologist subjects. FFOCT may revolutionize pathology practice in the future by permitting rapid diagnosis and in vivo diagnosis; this is potentially a disruptive new diagnostic technique in pathology.

  17. Observation of sound-induced corneal vibrational modes by optical coherence tomography.

    Science.gov (United States)

    Akca, B Imran; Chang, Ernest W; Kling, Sabine; Ramier, Antoine; Scarcelli, Giuliano; Marcos, Susana; Yun, Seok H

    2015-09-01

    The mechanical stability of the cornea is critical for maintaining its normal shape and refractive function. Here, we report an observation of the mechanical resonance modes of the cornea excited by sound waves and detected by using phase-sensitive optical coherence tomography. The cornea in bovine eye globes exhibited three resonance modes in a frequency range of 50-400 Hz. The vibration amplitude of the fundamental mode at 80-120 Hz was ~8 µm at a sound pressure level of 100 dB (2 Pa). Vibrography allows the visualization of the radially symmetric profiles of the resonance modes. A dynamic finite-element analysis supports our observation. PMID:26417503

  18. Broadband superluminescent diode–based ultrahigh resolution optical coherence tomography for ophthalmic imaging

    OpenAIRE

    Zhu, Dexi; Shen, Meixiao; JIANG, HONG; LI Ming; Wang, Michael R; Wang, Yuhong; Ge, Lili; Qu, Jia; Wang, Jianhua

    2011-01-01

    Spectral domain optical coherence tomography (SD-OCT) with ultrahigh resolution can be used to measure precise structures in the context of ophthalmic imaging. We designed an ultrahigh resolution SD-OCT system based on broadband superluminescent diode (SLD) as the light source. An axial resolution of 2.2 ?m in tissue, a scan depth of 1.48 mm, and a high sensitivity of 93 dB were achieved by the spectrometer designed. The ultrahigh-resolution SD-OCT system was employed to image the human corne...

  19. A method for obtaining scattering decomposed images in optical coherence tomography

    International Nuclear Information System (INIS)

    A method for obtaining scattering decomposed images in optical coherence tomography based on a multiple scattering model is proposed. Images of different scattering components can be obtained with this method. Employing the proposed method, scattering decomposed images of a biological sample are obtained. Then spatial mean filtering for denoising is performed on only the multiple scattering component, and the total signal is reconstructed. This method is useful for observing the images of different scattering components and has the potential to be applied to information extraction or signal processing on these components separately. (paper)

  20. Miniature real-time intraoperative forward-imaging optical coherence tomography probe

    OpenAIRE

    Joos, Karen M.; Shen, Jin-Hui

    2013-01-01

    Optical coherence tomography (OCT) has a tremendous global impact upon the ability to diagnose, treat, and monitor eye diseases. A miniature 25-gauge forward-imaging OCT probe with a disposable tip was developed for real-time intraoperative ocular imaging of posterior pole and peripheral structures to improve vitreoretinal surgery. The scanning range was 2 mm when the probe tip was held 3-4 mm from the tissue surface. The axial resolution was 4-6 µm and the lateral resolution was 25-35 µm. Th...

  1. Miniature real-time intraoperative forward-imaging optical coherence tomography probe.

    Science.gov (United States)

    Joos, Karen M; Shen, Jin-Hui

    2013-01-01

    Optical coherence tomography (OCT) has a tremendous global impact upon the ability to diagnose, treat, and monitor eye diseases. A miniature 25-gauge forward-imaging OCT probe with a disposable tip was developed for real-time intraoperative ocular imaging of posterior pole and peripheral structures to improve vitreoretinal surgery. The scanning range was 2 mm when the probe tip was held 3-4 mm from the tissue surface. The axial resolution was 4-6 µm and the lateral resolution was 25-35 µm. The probe was used to image cellophane tape and multiple ocular structures. PMID:24009997

  2. Imaging the eye fundus with real-time en-face spectral domain optical coherence tomography

    OpenAIRE

    Adrian Bradu; Adrian Gh. Podoleanu

    2014-01-01

    Real-time display of processed en-face spectral domain optical coherence tomography (SD-OCT) images is important for diagnosis. However, due to many steps of data processing requirements, such as Fast Fourier transformation (FFT), data re-sampling, spectral shaping, apodization, zero padding, followed by software cut of the 3D volume acquired to produce an en-face slice, conventional high-speed SD-OCT cannot render an en-face OCT image in real time. Recently we demonstrated a Master/Slave (MS...

  3. Segmentation of Doppler optical coherence tomography signatures using a support-vector machine

    OpenAIRE

    Singh, Amardeep S. G.; Schmoll, Tilman; Leitgeb, Rainer A.

    2011-01-01

    When processing Doppler optical coherence tomography images, there is a need to segment the Doppler signatures of the vessels. This can be used for visualization, for finding the center point of the flow areas or to facilitate the quantitative analysis of the vessel flow. We propose the use of a support-vector machine classifier in order to segment the flow. It uses the phase values of the Doppler image as well as texture information. We show that superior results compared to conventional sim...

  4. Mode-filtered large-core fiber for optical coherence tomography

    OpenAIRE

    Moon, Sucbei; Chen, Zhongping

    2012-01-01

    We have investigated the use of multimode fiber in optical coherence tomography (OCT) with a mode filter that selectively suppresses the power of the high-order modes (HOMs). A large-core fiber (LCF) that has a moderate number of guiding modes was found to be an attractive alternative to the conventional single-mode fiber for its large mode area and the consequentially wide Rayleigh range of the output beam if the HOMs of the LCF were efficiently filtered out by a mode filter installed in the...

  5. Tapered single mode fiber tip for high lateral resolution imaging in optical coherence tomography

    Science.gov (United States)

    Verma, Y.; Rao, K. Divakar; Mohanty, S. K.; Gupta, P. K.

    2007-02-01

    We report the use of a chemically etched tapered single mode fiber tip for enhancing lateral resolution in optical coherence tomography (OCT). The important advantage of this approach is that high lateral resolution is achieved, without compromising the depth of imaging, as is the case with the use of high numerical aperture (NA) objectives. Use of the tapered tip in the sample arm of a single mode fiber based set-up allowed visualization of intracellular structures of Elodea densa plant leaf that could not be seen by the conventional OCT.

  6. Optical computed tomography of radiochromic gels for accurate three-dimensional dosimetry

    Science.gov (United States)

    Babic, Steven

    In this thesis, three-dimensional (3-D) radiochromic Ferrous Xylenol-orange (FX) and Leuco Crystal Violet (LCV) micelles gels were imaged by laser and cone-beam (Vista(TM)) optical computed tomography (CT) scanners. The objective was to develop optical CT of radiochromic gels for accurate 3-D dosimetry of intensity-modulated radiation therapy (IMRT) and small field techniques used in modern radiotherapy. First, the cause of a threshold dose response in FX gel dosimeters when scanned with a yellow light source was determined. This effect stems from a spectral sensitivity to multiple chemical complexes that are at different dose levels between ferric ions and xylenol-orange. To negate the threshold dose, an initial concentration of ferric ions is needed in order to shift the chemical equilibrium so that additional dose results in a linear production of a coloured complex that preferentially absorbs at longer wavelengths. Second, a low diffusion leuco-based radiochromic gel consisting of Triton X-100 micelles was developed. The diffusion coefficient of the LCV micelle gel was found to be minimal (0.036 + 0.001 mm2 hr-1 ). Although a dosimetric characterization revealed a reduced sensitivity to radiation, this was offset by a lower auto-oxidation rate and base optical density, higher melting point and no spectral sensitivity. Third, the Radiological Physics Centre (RPC) head-and-neck IMRT protocol was extended to 3-D dose verification using laser and cone-beam (Vista(TM)) optical CT scans of FX gels. Both optical systems yielded comparable measured dose distributions in high-dose regions and low gradients. The FX gel dosimetry results were crossed checked against independent thermoluminescent dosimeter and GAFChromicRTM EBT film measurements made by the RPC. It was shown that optical CT scanned FX gels can be used for accurate IMRT dose verification in 3-D. Finally, corrections for FX gel diffusion and scattered stray light in the Vista(TM) scanner were developed to enable accurate acquisition of small beam dosimetric parameters for treatment planning commissioning. By applying these corrections, optically CT scanned FX and LCV gel dose measurements were found to be in agreement with reference GAFChromicRTM EBT film measurements. In conclusion, once specific problems affecting radiochromic gel materials and optical CT scanners are well understood and resolved, accurate 3-D dosimetry can be achieved. Ultimately, this will facilitate the safe clinical implementation of novel radiation treatments of cancer. Keywords. three-dimensional dosimetry, ferrous xylenol-orange gels, leuco crystal violet micelle gels, optical computed tomography, laser scanner, Vista(TM) cone-beam scanner, intensity-modulated radiation therapy, small field dosimetry.

  7. The measuring method for tests of horizontal two-phase gas-liquid flows, using optical and capacitance tomography

    International Nuclear Information System (INIS)

    The paper presents a measurement method in testing horizontal two-phase gas-liquid flows. It also describes the test stand including two tomography measurement systems. The optical and capacitance tomography systems can be used for measurements at the same time. It is necessary to apply two tomography systems working at the same time because of complexity of phenomena occurring in two-phase flows, and a wide range of applicability of the presented method. The optical tomography system in which a tested object is illuminated from five projections. The measurement of luminous intensity is changed into a discrete signal (0 or 1) in the detectors including 64 optical sensors. Next, the measuring results are subjected to reconstruction according to a matrix algorithm of reconstruction. A detailed description of the measuring sensor is presented further in the paper. The capacitance tomography system is based on a sensor with long measure electrodes without guard electrodes. The paper also presents exemplary results of image reconstruction for typical reconstruction methods such as LBP, IBP. The author discussed structures and action of the applied tomography measurement systems, the test results and the range of applicability

  8. Optical coherence tomography evaluation of retinal nerve fiber layer in longitudinally extensive transverse myelitis

    Directory of Open Access Journals (Sweden)

    Frederico C. Moura

    2011-02-01

    Full Text Available OBJECTIVE: To compare optical coherence tomography (OCT measurements on the retinal nerve fiber layer (RNFL of healthy controls and patients with longitudinally extensive transverse myelitis (LETM without previous optic neuritis. METHOD: Twenty-six eyes from 26 patients with LETM and 26 control eyes were subjected to automated perimetry and OCT for comparison of RNFL measurements. RESULTS: The mean deviation values from perimetry were significantly lower in patients with LETM than in controls (p<0.0001. RNFL measurements in the nasal quadrant and in the 3-o'clock segment were significantly smaller in LETM eyes than in controls. (p=0.04 and p=0.006, respectively. No significantly differences in other RNFL measurements were found. CONCLUSION: Patients with LETM may present localized RNFL loss, particularly on the nasal side of the optic disc, associated with slight visual field defects, even in the absence of previous episodes of optic neuritis. These findings emphasize the fact that patients with LETM may experience attacks of subclinical optic nerve damage.

  9. Novel electro-optical coupling technique for magnetic resonance-compatible positron emission tomography detectors.

    Science.gov (United States)

    Olcott, Peter D; Peng, Hao; Levin, Craig S

    2009-01-01

    A new magnetic resonance imaging (MRI)-compatible positron emission tomography (PET) detector design is being developed that uses electro-optical coupling to bring the amplitude and arrival time information of high-speed PET detector scintillation pulses out of an MRI system. The electro-optical coupling technology consists of a magnetically insensitive photodetector output signal connected to a nonmagnetic vertical cavity surface emitting laser (VCSEL) diode that is coupled to a multimode optical fiber. This scheme essentially acts as an optical wire with no influence on the MRI system. To test the feasibility of this approach, a lutetium-yttrium oxyorthosilicate crystal coupled to a single pixel of a solid-state photomultiplier array was placed in coincidence with a lutetium oxyorthosilicate crystal coupled to a fast photomultiplier tube with both the new nonmagnetic VCSEL coupling and the standard coaxial cable signal transmission scheme. No significant change was observed in 511 keV photopeak energy resolution and coincidence time resolution. This electro-optical coupling technology enables an MRI-compatible PET block detector to have a reduced electromagnetic footprint compared with the signal transmission schemes deployed in the current MRI/PET designs. PMID:19397853

  10. Multiple step algorithms for fluorescence -enhanced diffuse optical tomography; Algorithmes multi-etape pour la tomographie optique diffusive de fluorescence

    Energy Technology Data Exchange (ETDEWEB)

    Da Silva, A.; Planat-Chretien, A.; Dinten, J.M.; Gliere, A

    2004-07-01

    A discussion on recent works on diffusive inverse problems is presented with a special focus n three-dimensional shape-based imaging methods and their application to small animal imaging by fluorescence-enhanced Diffuse Optical Tomography (DOT). Numerical approaches (Finite Element Method) for handling problems modelled by elliptic coupled PDEs is justified by the complexity of the geometry of the system but is known to be time-and memory-consuming. The use of an 'adjoint field technique' considerably speeds up the treatment and allows a full 3D resolution. Nevertheless, because of the ill-posing of the problem, the reconstruction scheme is sensitive to a priori knowledge on the parameters to be reconstructed. Multiple modality imaging techniques (DOT coupled with CT or MRI for example) is becoming of great interest for introducing a priori knowledge of the regions of interest (ROI) and justifies the use of shape-based methods that reduces the dimension of the system, by identifying a finite number of ROI (absorption, scattering and/or, in our case, fluorescent zones), and intrinsically regularizes the reconstruction of the desired parameters. This study led to the proposal of a multiple step, self regularized, reconstruction algorithm of the bio-distribution of molecular fluorescent probes specially designed for tumour targeting. We introduce the a priori knowledge of the ROI via a segmentation of the results performed with a first rough reconstruction of the fluorescent regions. The results are then refined along iterations of the segmentation/reconstruction scheme. Measurements were performed on calibrated objects (phantoms) as well as in vivo (nude mice) with a plane parallel plate tomographer using a CCD camera as a detection scheme. (authors)

  11. NONINVASIVE DIAGNOSIS OF URINARY BLADDER CANCER BY CROSS-POLARIZATION OPTICAL COHERENCE TOMOGRAPHY: CLINICAL RESULTS

    Directory of Open Access Journals (Sweden)

    O. S. Streltsova

    2014-07-01

    Full Text Available The investigation examined the feasibility of cross-polarization optical cohe-rence tomography (CP OCT to detect early urinary bladder cancer (UBC. Studies were performed in 376 patients; 5290 images were obtained using an OCT 133-U optical coherence tomograph. To acquire and compare intrared-light scattering images in baseline and orthogonal polarizations is the basis of CP OCT; their analysis makes it possible to judge from the state of the epithelium/connective tissue system and to obtain information on changes in tissue depolarizing components, collagen in particular. The authors elaborated criteria as determinants of the nature of CP OCT changes in direct and orthogonal polarizations in health, inflammatory changes, and UBC at its early stage - urothelial dysplasia and carcinoma in situ in flat suspected areas.

  12. Cryosurgery treatment of actinic keratoses monitored by optical coherence tomography : A pilot study

    DEFF Research Database (Denmark)

    Themstrup, L.; Banzhaf, C.

    2013-01-01

    Background: Optical coherence tomography (OCT) is a non-invasive optical imaging technique providing high-resolution images. OCT may be useful as a monitoring tool during treatment of actinic keratoses (AK) and skin cancer. Objective: To examine and describe how OCT skin morphology changes when the tissue is exposed to the effects of cryotherapy. Methods: Normal ex vivo skin and in vivo AK lesions were examined. Cryotherapy was applied and OCT images were acquired at defined time points. OCT morphology was described. Results: Cryotherapy treatment produced an opaque iceball, and freezing depth could not be monitored by OCT. Vesicle formation after cryotherapy could be identified in OCT images. In ex vivo skin no vesicle formation occurred. Conclusion: OCT cannot monitor the freezing depth, but OCT was able to visualise AK lesions and vesicle formation shortly after cryotherapy. Results add to the assumption that OCT could be used in monitoring non-invasive treatments. © 2012 S. Karger AG, Basel.

  13. Online monitoring of printed electronics by Spectral-Domain Optical Coherence Tomography

    KAUST Repository

    Alarousu, Erkki

    2013-03-28

    Spectral-Domain Optical Coherence Tomography (SD-OCT) is an optical method capable of 3D imaging of object\\'s internal structure with micron-scale resolution. Modern SD-OCT tools offer the speed capable of online monitoring of printed devices. This paper demonstrates the use of SD-OCT in a simulated roll-to-roll (R2R) process through monitoring some structural properties of moving screen printed interdigitated electrodes. It is shown that structural properties can be resolved for speeds up to ca. 1m/min, which is the first step towards application of this method in real manufacturing processes, including roll-to-roll (R2R) printing.

  14. Common-path diffraction optical tomography with a low-coherence illumination for reducing speckle noise

    Science.gov (United States)

    Shin, Seungwoo; Kim, Youngchan; Lee, KyeoReh; Kim, Kyoohyun; Kim, Young-Jin; Park, HyunJoo; Park, YongKeun

    2015-03-01

    Common-path diffraction optical tomography (cDOT) is a non-invasive and label-free optical holographic technique for measuring both the three-dimensional refractive index (RI) tomograms and two-dimensional dynamic phase images of a sample. Due to common-path geometry, cDOT provides quantitative phase imaging with high phase sensitivity. However, the image quality of the cDOT suffers from speckle noise; the use of a monochromatic laser inevitably results in the formation of parasitic fringe patterns in measured quantitative phase images. Here, we present a technique to reduce speckle noise in the cDOT using a low-coherence illumination source. Utilizing a Ti-sapphire pulsed laser in the cDOT, we achieved the reduction of speckle noise in both the three-dimensional RI tomograms and two-dimensional dynamic phase images.

  15. In vivo tissue injury mapping using optical coherence tomography based methods.

    Science.gov (United States)

    Baran, Utku; Li, Yuandong; Wang, Ruikang K

    2015-07-20

    An injury causes changes in the optical attenuation coefficient (OAC) of a light beam traveling inside a tissue. We report a method called tissue injury mapping (TIM), which utilizes a noninvasive in vivo optical coherence tomography approach to generate an OAC and microvascular map of the injured tissue. Using TIM, the infarct region development in a mouse cerebral cortex during a stroke is visualized. Moreover, we demonstrate the changes in human facial skin structure and microvasculature during an acne lesion development from initiation to scarring. The results indicate that TIM may be used to aid in the characterization and the treatment of various diseases by enabling a high-resolution detection of tissue structural and microvascular changes. PMID:26367827

  16. Optical coherence tomography complemented by hyperspectral imaging for the study of protective wood coatings

    Science.gov (United States)

    Dingemans, L. M.; Papadakis, V. M.; Liu, P.; Adam, A. J. L.; Groves, R. M.

    2015-06-01

    Optical coherence tomography (OCT) is a contactless and non-destructive testing (NDT) technique based on low-coherence interferometry. It has recently become a popular NDT-tool for evaluating cultural heritage. In this study, protective coatings on wood and their penetration into the wood structure were measured with a customized infrared fiber optic OCT instrument. In order to enhance the understanding of the OCT measurements of coatings on real wooden samples, an optimization of the measuring and analyzing methodology was performed by developing an averaging approach and by post-processing the data. The collected information was complemented by data obtained with hyperspectral imaging to allow data from local OCT A-scans to be used in mapping the coating thicknesses over larger areas.

  17. Functional Optical Coherence Tomography Enables In Vivo Physiological Assessment of Retinal Rod and Cone Photoreceptors

    Science.gov (United States)

    Zhang, Qiuxiang; Lu, Rongwen; Wang, Benquan; Messinger, Jeffrey D.; Curcio, Christine A.; Yao, Xincheng

    2015-04-01

    Transient intrinsic optical signal (IOS) changes have been observed in retinal photoreceptors, suggesting a unique biomarker for eye disease detection. However, clinical deployment of IOS imaging is challenging due to unclear IOS sources and limited signal-to-noise ratios (SNRs). Here, by developing high spatiotemporal resolution optical coherence tomography (OCT) and applying an adaptive algorithm for IOS processing, we were able to record robust IOSs from single-pass measurements. Transient IOSs, which might reflect an early stage of light phototransduction, are consistently observed in the photoreceptor outer segment almost immediately (disease detection and improved treatment of diseases such as age-related macular degeneration (AMD) and other eye diseases that can cause photoreceptor damage.

  18. Dimensional quality control of Ti-Ni dental file by optical coordinate metrology and computed tomography

    DEFF Research Database (Denmark)

    Yagüe-Fabra, J.A.; Tosello, Guido

    2014-01-01

    Endodontic dental files usually present complex 3D geometries, which make the complete measurement of the component very challenging with conventional micro metrology tools. Computed Tomography (CT) can represent a suitable alternative solution to micro metrology tools based on optical and tactile techniques. However, the establishment of CT systems traceability when measuring 3D complex geometries is still an open issue. In this work, to verify the quality of the CT dimensional measurements, the dental file has been measured both with a ?CT system and an optical CMM (OCMM). The uncertainty of measurements performed with both technologies is assessed. The estimated uncertainty is eventually compared with the component’s calibration and tolerances to validate the measuring capability of the ?CT system.

  19. Functional imaging and assessment of the glucose diffusion rate in epithelial tissues in optical coherence tomography

    Science.gov (United States)

    Larin, K. V.; Tuchin, V. V.

    2008-06-01

    Functional imaging, monitoring and quantitative description of glucose diffusion in epithelial and underlying stromal tissues in vivo and controlling of the optical properties of tissues are extremely important for many biomedical applications including the development of noninvasive or minimally invasive glucose sensors as well as for therapy and diagnostics of various diseases, such as cancer, diabetic retinopathy, and glaucoma. Recent progress in the development of a noninvasive molecular diffusion biosensor based on optical coherence tomography (OCT) is described. The diffusion of glucose was studied in several epithelial tissues both in vitro and in vivo. Because OCT provides depth-resolved imaging of tissues with high in-depth resolution, the glucose diffusion is described not only as a function of time but also as a function of depth.

  20. Functional imaging and assessment of the glucose diffusion rate in epithelial tissues in optical coherence tomography

    International Nuclear Information System (INIS)

    Functional imaging, monitoring and quantitative description of glucose diffusion in epithelial and underlying stromal tissues in vivo and controlling of the optical properties of tissues are extremely important for many biomedical applications including the development of noninvasive or minimally invasive glucose sensors as well as for therapy and diagnostics of various diseases, such as cancer, diabetic retinopathy, and glaucoma. Recent progress in the development of a noninvasive molecular diffusion biosensor based on optical coherence tomography (OCT) is described. The diffusion of glucose was studied in several epithelial tissues both in vitro and in vivo. Because OCT provides depth-resolved imaging of tissues with high in-depth resolution, the glucose diffusion is described not only as a function of time but also as a function of depth. (special issue devoted to application of laser technologies in biophotonics and biomedical studies)

  1. Multiparametric optical coherence tomography imaging of the inner retinal hemodynamic response to visual stimulation

    Science.gov (United States)

    Radhakrishnan, Harsha; Srinivasan, Vivek J.

    2013-08-01

    The hemodynamic response to neuronal activation is a well-studied phenomenon in the brain, due to the prevalence of functional magnetic resonance imaging. The retina represents an optically accessible platform for studying lamina-specific neurovascular coupling in the central nervous system; however, due to methodological limitations, this has been challenging to date. We demonstrate techniques for the imaging of visual stimulus-evoked hyperemia in the rat inner retina using Doppler optical coherence tomography (OCT) and OCT angiography. Volumetric imaging with three-dimensional motion correction, en face flow calculation, and normalization of dynamic signal to static signal are techniques that reduce spurious changes caused by motion. We anticipate that OCT imaging of retinal functional hyperemia may yield viable biomarkers in diseases, such as diabetic retinopathy, where the neurovascular unit may be impaired.

  2. Optical coherence tomography based particle image velocimetry (OCT-PIV) of polymer flows

    Science.gov (United States)

    Buchsbaum, A.; Egger, M.; Burzic, I.; Koepplmayr, T.; Aigner, M.; Miethlinger, J.; Leitner, M.

    2015-06-01

    The measurement of spatially resolved velocity distributions is crucial for modelling flow and for understanding properties of materials produced in extrusion processes. Traditional methods for flow visualization such as particle image velocimetry (PIV) rely on optically transparent media and cannot be applied to turbid polymer melts. Here we present optical coherence tomography as an imaging technique for PIV data processing that allows for measuring a sequence of time resolved images even in turbid media. Time-resolved OCT images of a glass-fibre polymer compound were acquired during an extrusion process in a slit die. The images are post-processed by ensemble cross-correlation to calculate spatially resolved velocity vector fields. The results compared well with velocity data obtained by Doppler-OCT. Overall, this new technique (OCT-PIV) represents an important extension of PIV to turbid materials by the use of OCT.

  3. The influence of glass fibers on elongational viscosity studied by means of optical coherence tomography and X-ray computed tomography

    Energy Technology Data Exchange (ETDEWEB)

    Aigner, M., E-mail: michael.aigner@jku.at; Köpplmayr, T., E-mail: thomas.koepplmayr@jku.at, E-mail: Christian.lang@jku.at; Lang, C., E-mail: thomas.koepplmayr@jku.at, E-mail: Christian.lang@jku.at; Burzic, I., E-mail: ivana.burzic@jku.at, E-mail: juergen.miethlinger@jku.at; Miethlinger, J., E-mail: ivana.burzic@jku.at, E-mail: juergen.miethlinger@jku.at [Institute of Polymer Extrusion and Compounding, Johannes Kepler University Linz (Austria); Salaberger, D., E-mail: dietmar.salaberger@fh-wels.at [University of Applied Sciences Upper Austria (Austria); Buchsbaum, A., E-mail: andreas.buchsbaum@recendt.at; Leitner, M. [Research Center for Non Destructive Testing GmbH (Austria); Heise, B., E-mail: bettina.heise@jku.at [Christian Doppler Laboratory for Microscopic and Spectroscopic Material Characterization, ZONA, Austria and Institute for Knowledge-based Mathematical Systems, Johannes Kepler University Linz (Austria); Schausberger, S. E., E-mail: stefan.schausberger@jku.at; Stifter, D. [Christian Doppler Laboratory for Microscopic and Spectroscopic Material Characterization, ZONA (Austria)

    2014-05-15

    We report on the flow characteristics of glass-fiber-reinforced polymers in elongational rheometry. Unlike polymers with geometrically isotropic fillers, glass-fiber-reinforced polymers exhibit flow behavior and rheology that depend heavily on the orientation, the length distribution and the content of the fibers. One of the primary objectives of this study was to determine the effect of fiber orientation, concentration and distribution on the entrance pressure drop by means of optical coherence tomography (OCT), full-field optical coherence microscopy (FF-OCM), and X-ray computed tomography (X-CT). Both pressure drop and melt flow were analyzed using a special elongation die (Thermo Scientific X-Die [3]) for inline measurements. Samples with a variety of fiber volume fractions, fiber lengths and processing temperatures were measured.

  4. High-Resolution Optical Doppler Tomography for in Vitro and in Vivo Fluid Flow Dynamics

    Directory of Open Access Journals (Sweden)

    Cheng-Jen Chang

    2003-06-01

    Full Text Available Background: The objective of our research was to use a noninvasive tomographic imagingtechnique with high spatial resolution (2-15 ?m to characterize and monitorfluid flow and the microvasculature in highly scattering biological tissues atuser-specified discrete locations.Methods: The technique of optical Doppler tomography (ODT combines laserDoppler flowmetry (LDF with optical coherence tomography to obtainhigh-resolution tomographic velocity and structural images of static andmoving constituents in highly scattering biological tissues. We present ODTstructural and velocity images using in vitro turbid samples of a circular conduitinfused with a suspension of polymer microspheres. At a thin rectangularcross-section of the conduit, the Intralipid flow was measured. Bloodflow velocity was measured in vivo in the ear of rodent skin.Results: In first model, the ODT velocity images demonstrated beads near the centerof the conduit moving faster than those near the circular wall. In the secondmodel, the ODT velocity images indicated that laminar flow was fastestalong the central axis of the conduit. Blood flow in 2 small veins with diametersof 70 and 40 ?m, respectively, and an artery with diameter of 25 ?m,was clearly identified in a rodent model.Conclusion: In our preliminary in vitro and in vivo studies on turbid samples and modelvasculatures, we determined that the application of ODT to characterize andimage blood flow with high spatial resolution at discrete user-specified locationsin highly scattering biological tissues is feasible.

  5. Optical coherence tomography imaging of the basal ganglia: feasibility and brief review.

    Science.gov (United States)

    Lopez, W O Contreras; Ângelos, J S; Martinez, R C R; Takimura, C K; Teixeira, M J; Lemos Neto, P A; Fonoff, E T

    2015-12-01

    Optical coherence tomography (OCT) is a promising medical imaging technique that uses light to capture real-time cross-sectional images from biological tissues in micrometer resolution. Commercially available optical coherence tomography systems are employed in diverse applications, including art conservation and diagnostic medicine, notably in cardiology and ophthalmology. Application of this technology in the brain may enable distinction between white matter and gray matter, and obtainment of detailed images from within the encephalon. We present, herein, the in vivo implementation of OCT imaging in the rat brain striatum. For this, two male 60-day-old rats (Rattus norvegicus, Albinus variation, Wistar) were stereotactically implanted with guide cannulas into the striatum to guide a 2.7-French diameter high-definition OCT imaging catheter (Dragonfly™, St. Jude Medical, USA). Obtained images were compared with corresponding histologically stained sections to collect imaging samples. A brief analysis of OCT technology and its current applications is also reported, as well as intra-cerebral OCT feasibility on brain mapping during neurosurgical procedures. PMID:26421868

  6. Time reversal optical tomography locates fluorescent targets in a turbid medium

    Science.gov (United States)

    Wu, Binlin; Cai, W.; Gayen, S. K.

    2013-03-01

    A fluorescence optical tomography approach that extends time reversal optical tomography (TROT) to locate fluorescent targets embedded in a turbid medium is introduced. It uses a multi-source illumination and multi-detector signal acquisition scheme, along with TR matrix formalism, and multiple signal classification (MUSIC) to construct pseudo-image of the targets. The samples consisted of a single or two small tubes filled with water solution of Indocyanine Green (ICG) dye as targets embedded in a 250 mm × 250 mm × 60 mm rectangular cell filled with Intralipid-20% suspension as the scattering medium. The ICG concentration was 1?M, and the Intralipid-20% concentration was adjusted to provide ~ 1-mm transport length for both excitation wavelength of 790 nm and fluorescence wavelength around 825 nm. The data matrix was constructed using the diffusely transmitted fluorescence signals for all scan positions, and the TR matrix was constructed by multiplying data matrix with its transpose. A pseudo spectrum was calculated using the signal subspace of the TR matrix. Tomographic images were generated using the pseudo spectrum. The peaks in the pseudo images provided locations of the target(s) with sub-millimeter accuracy. Concurrent transmission TROT measurements corroborated fluorescence-TROT findings. The results demonstrate that TROT is a fast approach that can be used to obtain accurate three-dimensional position information of fluorescence targets embedded deep inside a highly scattering medium, such as, a contrast-enhanced tumor in a human breast.

  7. Feasibility of endovascular optical coherence tomography for high-resolution carotid vessel wall imaging

    Science.gov (United States)

    Cheng, Kyle H. Y.; Sun, Cuiru; Cruz, Juan P.; Marotta, Thomas R.; Spears, Julian; Montanera, Walter J.; Herman, Peter R.; Thind, Aman; Courtney, Brian; Standish, Beau A.; Yang, Victor X. D.

    2012-02-01

    Carotid Artery Stenting (CAS) is a procedure that treats carotid atherosclerosis which should be monitored by in vivo high resolution imaging for the quality of the procedure and potential complications. The purpose of this pilot study is to evaluate the ability of optical coherence tomography to construct high resolution two and three dimensional images of stenting in porcine carotid artery for high accuracy diagnostic purposes. Four Yorkshire pigs were anaesthetized and catheterized. A state-of-the-art optical coherence tomography (OCT) system (Lightlab Imaging, St. Jude Medical Inc.) and an automated injector were used to obtain both healthy and stented porcine carotid artery images. Data obtained were then processed for visualization. The state-of-the-art OCT system was able to capture high resolution images of both healthy and stented carotid arteries. High quality three dimensional images of stented carotid arteries were constructed, clearly depicting stent apposition and thrombus formation over different stents. The results demonstrated that current state-of-the-art OCT system can be used to generate high quality three dimensional images of carotid arterial stents for accurate diagnosis of stent apposition and complications under appropriate imaging conditions.

  8. Spectral domain optical coherence tomography documented rapid resolution of pseudophakic cystoid macular edema with topical difluprednate

    Directory of Open Access Journals (Sweden)

    Chalam KV

    2012-01-01

    Full Text Available KV Chalam, Vijay Khetpal, Chirag J PatelDepartment of Ophthalmology, University of Florida Jacksonville, FL, USAIntroduction: Pseudophakic cystoid macular edema is a common cause of poor vision after cataract surgery, and topical corticosteroids and nonsteroidal anti-inflammatory drugs are used for its treatment. We investigated the effectiveness of difluprednate (Durezol®, recently approved by the US Food and Drug Administration in the treatment of cystoid macular edema, assisted with spectral domain optical coherence tomography (SD-OCT.Case report: A 63-year-old African-American woman presented 6 weeks after uneventful cataract surgery in her left eye with decreased vision and associated distortion of the central visual field. Fluorescein angiogram and SD-OCT confirmed pseudophakic cystoid macular edema. Difluprednate was topically administered twice daily and monitored with serial imaging. Resolution was noted after 1 month of topical therapy, with improvement in visual acuity and resolution of distortion.Conclusion: Difluprednate is an effective treatment for patients with severe pseudophakic cystoid macular edema. SD-OCT allows the physician to monitor resolution of the macular edema easily.Keywords: cystoid macular edema, difluprednate, spectral domain optical coherence tomography, pseudophakic

  9. High-definition optical coherence tomography imaging of melanocytic lesions : a pilot study

    DEFF Research Database (Denmark)

    Boone, Marc A L M; Norrenberg, Sarah

    2014-01-01

    High-definition optical coherence tomography (HD-OCT) is a non-invasive in vivo imaging technique with cellular resolution based on the principle of conventional optical coherence tomography. The objective of this study was to evaluate HD-OCT for its ability to identify architectural patterns and cytologic features of melanocytic lesions. All lesions were examined by one observer clinically and using dermoscopy. Cross-sectional HD-OCT images were compared with histopathology. En face HD-OCT images were compared with reflectance confocal microscopy (RCM). Twenty-six melanocytic lesions of 26 patients were imaged. Identification of architectural patterns in cross-sectional mode and cytologic features of pigmented cells in the epidermis, dermo-epidermal junction, papillary dermis, and superficial reticular dermis in the en face mode was possible by HD-OCT. HD-OCT provides morphological imaging with sufficient resolution and penetration depth to discriminate architectural patterns and cytologic features of pigmented cells in epidermis and dermis. The method appears to offer the possibility of additional three-dimensional structural information complementary to that of RCM, albeit at a slightly lower lateral resolution. The diagnostic potential of HD-OCT regarding malignant melanoma is not high enough for ruling out a diagnosis of malignant melanoma.

  10. Argus II retinal prosthesis malrotation and repositioning with intraoperative optical coherence tomography in a posterior staphyloma

    Science.gov (United States)

    Seider, Michael I; Hahn, Paul

    2015-01-01

    Introduction The Argus II retinal prosthesis may improve visual function in patients with severe vision loss from retinitis pigmentosa. Optimal centration of the electrode array over the macula is important to achieve optimal visual results. Argus tack malrotation is a novel entity that may be encountered during placement, especially in patients with posterior staphyloma. Methods Retrospective case review. Results During tacking of the electronics array a clockwise rotation occurred resulting in malposition. We hypothesize this was secondary to undue rotation or posterior pressure applied during tack insertion in conjunction with placement over a previously unrecognized posterior staphyloma. Intraoperative optical coherence tomography, because of the cross-sectional images provided, was helpful in visualizing the distance between the electronics array and the retina, which was difficult to assess using the surgical microscope alone. Repositioning was achieved by adjusting the tack without removal. The patient experienced an improvement in vision as a result of the surgery. Conclusion Malrotation may occur when tacking the Argus II prosthesis, and the presence of a posterior staphyloma may increase this risk. It is important to differentiate malrotation from tack misplacement – the former may be addressed with array unrotation or partial tack withdrawal and the latter may require tack removal and reinsertion. Also, intraoperative optical coherence tomography may be helpful in characterizing electronics array position during surgery. PMID:26648688

  11. Automatic retinal blood flow calculation using spectral domain optical coherence tomography

    Science.gov (United States)

    Wehbe, Hassan; Ruggeri, Marco; Jiao, Shuliang; Gregori, Giovanni; Puliafito, Carmen A.

    2008-02-01

    Optical Doppler tomography (ODT) is a branch of optical coherence tomography (OCT) that can measure the speed of a blood flow by measuring the Doppler shift impinged on the probing sample light by the moving blood cells. However, the measured speed of blood flow is a function of the Doppler angle, which needs to be determined in order to calculate the absolute velocity of the blood flow inside a vessel. We developed a technique that can extract the Doppler angle from the 3D data measured with spectral-domain OCT, which needs to extract the lateral and depth coordinates of a vessel in each measured ODT and OCT image. The lateral coordinates and the diameter of a blood vessel were first extracted in each OCT structural image by using the technique of blood vessel shadowgram, a technique first developed by us for enhancing the retinal blood vessel contrast in the en face view of the 3D OCT. The depth coordinate of a vessel was then determined by using a circular averaging filter moving in the depth direction along the axis passing through the vessel center in the ODT image. The Doppler angle was then calculated from the extracted coordinates of the blood vessel. The technique was applied in blood flow measurements in retinal blood vessels, which has potential impact on the study and diagnosis of blinding diseases like glaucoma and diabetic retinopathy.

  12. Methods for a fusion of optical coherence tomography and stereo camera image data

    Science.gov (United States)

    Bergmeier, Jan; Kundrat, Dennis; Schoob, Andreas; Kahrs, Lüder A.; Ortmaier, Tobias

    2015-03-01

    This work investigates combination of Optical Coherence Tomography and two cameras, observing a microscopic scene. Stereo vision provides realistic images, but is limited in terms of penetration depth. Optical Coherence Tomography (OCT) enables access to subcutaneous structures, but 3D-OCT volume data do not give the surgeon a familiar view. The extension of the stereo camera setup with OCT imaging combines the benefits of both modalities. In order to provide the surgeon with a convenient integration of OCT into the vision interface, we present an automated image processing analysis of OCT and stereo camera data as well as combined imaging as augmented reality visualization. Therefore, we care about OCT image noise, perform segmentation as well as develop proper registration objects and methods. The registration between stereo camera and OCT results in a Root Mean Square error of 284 ?m as average of five measurements. The presented methods are fundamental for fusion of both imaging modalities. Augmented reality is shown as application of the results. Further developments lead to fused visualization of subcutaneous structures, as information of OCT images, into stereo vision.

  13. Tomografía de coherencia óptica en la retinopatía por eclipse / Optical coherence tomography in solar eclipse retinopathy

    Scientific Electronic Library Online (English)

    C., Calvo-González; J., Reche-Frutos; E., Santos-Bueso; D., Díaz-Valle; J.M., Benítez-Del-Castillo; J., García-Sánchez.

    2006-05-01

    Full Text Available Caso clínico: Se describe el caso de un paciente que sufrió pérdida visual aguda tras visualización directa y mantenida de un eclipse solar. El diagnóstico se realiza principalmente mediante tomografía de coherencia óptica. Discusión: La retinopatía solar es actualmente una causa poco frecuente de p [...] érdida visual. No obstante, se describen algunos casos, especialmente tras la visualización de eclipses de sol. La tomografía de coherencia óptica constituye una prueba diagnóstica adecuada para detectar alteraciones, de forma característica, en las capas más externas de la retina, secundarias a la exposición solar constante. Abstract in english Case report: We describe the case of a patient suffering from acute visual loss soon after watching a solar eclipse. Optical coherence tomography was the main diagnostic tool used. Discussion: Solar retinopathy is now an unusual cause of visual loss, although there are still some cases diagnosed, es [...] pecially after viewing solar eclipses. Optical coherence tomography is suitable for detecting permanent retinal injuries related to solar exposure, with the outer retinal layers being typically affected.

  14. Sub-diffuse interstitial optical tomography to improve the safety of brain needle biopsies: a proof-of-concept study.

    Science.gov (United States)

    Goyette, Andréanne; Pichette, Julien; Tremblay, Marie-Andrée; Laurence, Audrey; Jermyn, Michael; Mok, Kelvin; Paulsen, Keith D; Roberts, David W; Petrecca, Kevin; Wilson, Brian C; Leblond, Frédéric

    2015-01-15

    The extraction of tissue samples during brain needle biopsy can cause life-threatening hemorrhage because of significant blood vessel injury during the procedure. Vessel rupture can have significant consequences for patient health, ranging from transient neurological deficits to death. Here, we present a sub-diffuse optical tomography technique that can be integrated into neurosurgical workflow to detect the presence of blood vessels. A proof-of-concept study performed on a realistic brain tissue phantom is presented and demonstrates that interstitial optical tomography (iOT) can detect several 1 mm diameter high-contrast absorbing objects located <2??mm from the needle. PMID:25679836

  15. Photothermal optical lock-in optical coherence tomography for in vivo imaging

    OpenAIRE

    Tucker-Schwartz, Jason M.; Lapierre-Landry, Maryse; Patil, Chetan A; Skala, Melissa C.

    2015-01-01

    Photothermal OCT (PTOCT) provides high sensitivity to molecular targets in tissue, and occupies a spatial imaging regime that is attractive for small animal imaging. However, current implementations of PTOCT require extensive temporal sampling, resulting in slow frame rates and a large data burden that limit its in vivo utility. To address these limitations, we have implemented optical lock-in techniques for photothermal optical lock-in OCT (poli-OCT), and demonstrated the in vivo imaging cap...

  16. Neurosurgical hand-held optical coherence tomography (OCT) forward-viewing probe

    Science.gov (United States)

    Sun, Cuiru; Lee, Kenneth K. C.; Vuong, Barry; Cusimano, Michael; Brukson, Alexander; Mariampillai, Adrian; Standish, Beau A.; Yang, Victor X. D.

    2012-02-01

    A prototype neurosurgical hand-held optical coherence tomography (OCT) imaging probe has been developed to provide micron resolution cross-sectional images of subsurface tissue during open surgery. This new ergonomic hand-held probe has been designed based on our group's previous work on electrostatically driven optical fibers. It has been packaged into a catheter probe in the familiar form factor of the clinically accepted Bayonet shaped neurosurgical non-imaging Doppler ultrasound probes. The optical design was optimized using ZEMAX simulation. Optical properties of the probe were tested to yield an ~20 um spot size, 5 mm working distance and a 3.5 mm field of view. The scan frequency can be increased or decreased by changing the applied voltage. Typically a scan frequency of less than 60Hz is chosen to keep the applied voltage to less than 2000V. The axial resolution of the probe was ~15 um (in air) as determined by the OCT system. A custom-triggering methodology has been developed to provide continuous stable imaging, which is crucial for clinical utility. Feasibility of this probe, in combination with a 1310 nm swept source OCT system was tested and images are presented to highlight the usefulness of such a forward viewing handheld OCT imaging probe. Knowledge gained from this research will lay the foundation for developing new OCT technologies for endovascular management of cerebral aneurysms and transsphenoidal neuroendoscopic treatment of pituitary tumors.

  17. Computed optical interferometric tomography for high-speed volumetric cellular imaging

    Science.gov (United States)

    Liu, Yuan-Zhi; Shemonski, Nathan D.; Adie, Steven G.; Ahmad, Adeel; Bower, Andrew J.; Carney, P. Scott; Boppart, Stephen A.

    2014-01-01

    Three-dimensional high-resolution imaging methods are important for cellular-level research. Optical coherence microscopy (OCM) is a low-coherence-based interferometry technology for cellular imaging with both high axial and lateral resolution. Using a high-numerical-aperture objective, OCM normally has a shallow depth of field and requires scanning the focus through the entire region of interest to perform volumetric imaging. With a higher-numerical-aperture objective, the image quality of OCM is affected by and more sensitive to aberrations. Interferometric synthetic aperture microscopy (ISAM) and computational adaptive optics (CAO) are computed imaging techniques that overcome the depth-of-field limitation and the effect of optical aberrations in optical coherence tomography (OCT), respectively. In this work we combine OCM with ISAM and CAO to achieve high-speed volumetric cellular imaging. Experimental imaging results of ex vivo human breast tissue, ex vivo mouse brain tissue, in vitro fibroblast cells in 3D scaffolds, and in vivo human skin demonstrate the significant potential of this technique for high-speed volumetric cellular imaging. PMID:25401012

  18. Optical coherence tomography signal analysis: LIDAR like equation and inverse methods

    International Nuclear Information System (INIS)

    Optical Coherence Tomography (OCT) is based on the media backscattering properties in order to obtain tomographic images. In a similar way, LIDAR (Light Detection and Range) technique uses these properties to determine atmospheric characteristics, specially the signal extinction coefficient. Exploring this similarity allowed the application of signal inversion methods to the OCT images, allowing to construct images based in the extinction coefficient, original result until now. The goal of this work was to study, propose, develop and implement algorithms based on OCT signal inversion methodologies with the aim of determine the extinction coefficient as a function of depth. Three inversion methods were used and implemented in LABViewR: slope, boundary point and optical depth. Associated errors were studied and real samples (homogeneous and stratified) were used for two and three dimension analysis. The extinction coefficient images obtained from the optical depth method were capable to differentiate air from the sample. The images were studied applying PCA and cluster analysis that established the methodology strength in determining the sample's extinction coefficient value. Moreover, the optical depth methodology was applied to study the hypothesis that there is some correlation between signal extinction coefficient and the enamel teeth demineralization during a cariogenic process. By applying this methodology, it was possible to observe the variation of the extinction coefficient as depth function and its correlation with microhardness variation, showing that in deeper layers its values tends to a healthy tooth values, behaving as the same way that the microhardness. (author)

  19. Morphological and functional changes in spectral domain optical coherence tomography and microperimetry in macular microhole variants: Spectral domain optical coherence tomography and microperimetry correlation

    Directory of Open Access Journals (Sweden)

    Laxmi Gella

    2012-01-01

    Full Text Available Purpose: To evaluate the relationship between the morphology and retinal function of macular microhole (MMH variants. Materials and Methods: We evaluated 12 eyes of 11 patients with defects in the IS/OS junction of photoreceptor layer with SD-OCT. All patients underwent comprehensive ophthalmic examination including spectral domain optical coherence tomography (SD-OCT and microperimetry. Results: The mean logMAR visual acuity in the affected eye was 0.15 ± 0.17 (range 0.00-0.5. Mean horizontal diameter of the MMH was 163 ± 99 ?m; the mean retinal sensitivity in the area corresponding to the MMH was 13.79 ± 4.6 dB. Negative correlation was found between the MMH diameter and the retinal sensitivity (r = -0.65, p0 = 0.02. Three morphological patterns of MMH variants were recognized on SD-OCT, which did not differ in retinal sensitivities. Conclusion: We described and classified the MMH variants and made an assessment on the physiological functions using microperimeter.

  20. Comparison of retinal thickness by Fourier-domain optical coherence tomography and OCT retinal image analysis software segmentation analysis derived from Stratus optical coherence tomography images

    Science.gov (United States)

    Tátrai, Erika; Ranganathan, Sudarshan; Ferencz, Mária; Debuc, Delia Cabrera; Somfai, Gábor Márk

    2011-05-01

    Purpose: To compare thickness measurements between Fourier-domain optical coherence tomography (FD-OCT) and time-domain OCT images analyzed with a custom-built OCT retinal image analysis software (OCTRIMA). Methods: Macular mapping (MM) by StratusOCT and MM5 and MM6 scanning protocols by an RTVue-100 FD-OCT device are performed on 11 subjects with no retinal pathology. Retinal thickness (RT) and the thickness of the ganglion cell complex (GCC) obtained with the MM6 protocol are compared for each early treatment diabetic retinopathy study (ETDRS)-like region with corresponding results obtained with OCTRIMA. RT results are compared by analysis of variance with Dunnett post hoc test, while GCC results are compared by paired t-test. Results: A high correlation is obtained for the RT between OCTRIMA and MM5 and MM6 protocols. In all regions, the StratusOCT provide the lowest RT values (mean difference 43 +/- 8 ?m compared to OCTRIMA, and 42 +/- 14 ?m compared to RTVue MM6). All RTVue GCC measurements were significantly thicker (mean difference between 6 and 12 ?m) than the GCC measurements of OCTRIMA. Conclusion: High correspondence of RT measurements is obtained not only for RT but also for the segmentation of intraretinal layers between FD-OCT and StratusOCT-derived OCTRIMA analysis. However, a correction factor is required to compensate for OCT-specific differences to make measurements more comparable to any available OCT device.

  1. Ultrahigh-resolution adaptive optics - optical coherence tomography: toward isotropic 3 ?m resolution for in vivo retinal imaging

    Science.gov (United States)

    Zawadzki, Robert J.; Zhang, Yan; Jones, Steven M.; Ferguson, R. Daniel; Choi, Stacey S.; Cense, Barry; Evans, Julia W.; Chen, Diana; Miller, Donald T.; Olivier, Scot S.; Werner, John S.

    2007-02-01

    Ultrahigh axial resolution in adaptive optics - optical coherence tomography (AO-OCT) is fundamentally limited by the intrinsic chromatic aberrations of the human eye. Variation in refractive index of the ocular media with wavelength causes the spectral content of broadband light sources to focus at different depths in the retina for light entering the eye and at the imaging detector for light exiting. This effect has not been previously reported for ultrahigh-resolution OCT (without AO) likely because the effect is masked by the relatively long depth of focus dictated by the small pupils used in these systems. With AO, the pupil size is much larger and depth of focus substantially narrower. As such the chromatic aberrations of the eye can counteract the lateral resolution benefit of AO when used with broadband light sources. To more fully tap the potential of AO-OCT, compensation of the eye's chromatic and monochromatic aberrations must occur concurrently. One solution is to insert an achromatizing lens in front of the eye whose chromatic aberrations are equal but opposite in sign to that of the eye. In this paper we evaluate the efficacy of a novel design that uses a custom achromatizing lens placed near the fiber collimating optic. AO-OCT images are acquired on several subjects with and without the achromatizing lens and in combination with two light sources of different spectral width. The combination of the achromatizing lens and broadband light source yielded the sharpest images of the retina and the smallest speckle.

  2. 3D nondestructive testing system with an affordable multiple reference optical-delay-based optical coherence tomography.

    Science.gov (United States)

    Dsouza, Roshan; Subhash, Hrebesh M; Neuhaus, Kai; Hogan, Josh; Wilson, Carol; Leahy, Martin

    2015-06-20

    Optical coherence tomography (OCT) is emerging as a powerful noncontact imaging technique, allowing high-quality cross-sectional imaging of scattering specimens nondestructively. However, the complexity and cost of current embodiments of an OCT system limit its use in various nondestructive testing (NDT) applications at resource-limited settings. In this paper, we demonstrate the feasibility of a novel low-cost OCT system for a range of nondestructive testing (NDT) applications. The proposed imaging system is based on an enhanced time-domain OCT system with a low cost and small form factor reference arm optical delay, called multiple reference OCT (MR-OCT), which uses a miniature voice coil actuator and a partial mirror for extending the axial scan range. The proposed approach is potentially a low-cost, compact, and unique optical imaging modality for a range of NDT applications in a low-resource setting. Using this method, we demonstrated the capability of MR-OCT to perform cross-sectional and volumetric imaging at 1200 A-scans per second. PMID:26193006

  3. Performance of a combined optical coherence tomography and scanning laser ophthalmoscope with adaptive optics for human retinal imaging applications

    Science.gov (United States)

    Wells-Gray, Elaine M.; Zawadzki, Robert J.; Finn, Susanna C.; Greiner, Cherry; Werner, John S.; Choi, Stacey S.; Doble, Nathan

    2015-03-01

    We describe the design and performance of a recently implemented retinal imaging system for the human eye that combines adaptive optics (AO) with spectral domain optical coherence tomography (OCT) and scanning laser ophthalmoscopy (SLO). The AO-OCT-SLO system simultaneously acquires SLO frames and OCT B-scans at 60 Hz with an OCT volume acquisition scan rate of 0.24 Hz. The SLO images are used to correct for eye motion during the registration of OCT B-scans. Key optical design considerations are discussed including: minimizing system aberrations through the use of off-axis relay telescopes; choice of telescope magnification based on pupil plane requirements and restrictions; and the use of dichroic beam splitters to separate and re-combine OCT and SLO beams around the nonshared horizontal scanning mirrors. We include an analysis of closed-loop AO correction on a model eye and compare these findings with system performance in vivo. The 2D and 3D OCT scans included in this work demonstrate the ability of this system to laterally and axially resolve individual cone photoreceptors, while the corresponding SLO images show the en face mosaics at the photoreceptor layer showing rods and cones. Images from both healthy and diseased retina are presented.

  4. High-resolution imaging of biological tissue with full-field optical coherence tomography

    Science.gov (United States)

    Zhu, Yue; Gao, Wanrong

    2015-03-01

    A new full-field optical coherence tomography system with high-resolution has been developed for imaging of cells and tissues. Compared with other FF-OCT (Full-field optical coherence tomography, FF-OCT) systems illuminated with optical fiber bundle, the improved Köhler illumination arrangement with a halogen lamp was used in the proposed FF-OCT system. High numerical aperture microscopic objectives were used for imaging and a piezoelectric ceramic transducer (PZT) was used for phase-shifting. En-face tomographic images can be obtained by applying the five-step phase-shifting algorithm to a series of interferometric images which are recorded by a smart camera. Three-dimensional images can be generated from these tomographic images. Imaging of the chip of Intel Pentium 4 processor demonstrated the ultrahigh resolution of the system (lateral resolution is 0.8?m ), which approaches the theoretical resolution 0.7 ?m× 0.5 ?m (lateral × axial). En-face images of cells of onion show an excellent performance of the system in generating en-face images of biological tissues. Then, unstained pig stomach was imaged as a tissue and gastric pits could be easily recognized using FF-OCT system. Our study provides evidence for the potential ability of FFOCT in identifying gastric pits from pig stomach tissue. Finally, label-free and unstained ex vivo human liver tissues from both normal and tumor were imaged with this FFOCT system. The results show that the setup has the potential for medical diagnosis applications such liver cancer diagnosis.

  5. Ultra-high resolution Fourier domain optical coherence tomography for old master paintings.

    Science.gov (United States)

    Cheung, C S; Spring, M; Liang, H

    2015-04-20

    In the last 10 years, Optical Coherence Tomography (OCT) has been successfully applied to art conservation, history and archaeology. OCT has the potential to become a routine non-invasive tool in museums allowing cross-section imaging anywhere on an intact object where there are no other methods of obtaining subsurface information. While current commercial OCTs have shown potential in this field, they are still limited in depth resolution (> 4 ?m in paint and varnish) compared to conventional microscopic examination of sampled paint cross-sections (~1 ?m). An ultra-high resolution fiber-based Fourier domain optical coherence tomography system with a constant axial resolution of 1.2 ?m in varnish or paint throughout a depth range of 1.5 mm has been developed. While Fourier domain OCT of similar resolution has been demonstrated recently, the sensitivity roll-off of some of these systems are still significant. In contrast, this current system achieved a sensitivity roll-off that is less than 2 dB over a 1.2 mm depth range with an incident power of ~1 mW on the sample. The high resolution and sensitivity of the system makes it convenient to image thin varnish and glaze layers with unprecedented contrast. The non-invasive 'virtual' cross-section images obtained with the system show the thin varnish layers with similar resolution in the depth direction but superior clarity in the layer interfaces when compared with conventional optical microscope images of actual paint sample cross-sections obtained micro-destructively. PMID:25969057

  6. Development of Spectral Domain Optical Coherence Tomography for in vivo Functional Imaging of Biological Tissues

    Science.gov (United States)

    An, Lin

    Optical coherence tomography is a rapidly developing optical imaging modality capable of noninvasively providing depth resolved information of biological tissue at micrometer scale. In this thesis, we described several OCT technologies that can be used to double the imaging depth, realize functional vasculature imaging of biological tissue and increase the imaging speed of OCT system. Aim 1: Use of a scanner to introduce spatial frequency modulation to OCT spectral interferograms for in vivo full-range Fourier-domain optical coherence tomography. A novel method was developed that could easily introduce a modulation frequency onto the X-direction (i.e., B-scan) of the FDOCT scanning system, enabling full-range Fourier-domain Optical Coherence Tomography (frFDOCT). Compared to the conventional FDOCT system, the newly developed frFDOCT system can provide increased system sensitivity and deeper imaging depth. The previous technology that can achieve frFDOCT either needed multiple steps for data capturing, which is time consuming, or required additional components which increased the system's complexity. The newly developed method generates a modulation spatial frequency in the spectral interferogram by simply offsetting the probe beam at the X-scanner. Aim 2: Using optical micro-angiography to achieve in vivo volumetric imaging of vascular perfusion within human retina and choroids. Optical Micro-Angiography (OMAG) is a functional extension of FDOCT technology. It can achieve visualization of vasculature network of biological tissue. In order to apply the OMAG method to image vasculature map of human retina and choroid, a phase compensation algorithm was developed, which could minimize the motion artifacts generated by the movements of human eye and head. Aim 3: Developing ultrahigh sensitive optical micro-angiography to achieve micro vasculature imaging of biological tissue. To improve the vasculature image quality, we developed ultrahigh sensitive OMAG (UHS-OMAG). Unlike conventional OMAG, UHS-OMAG applied the OMAG algorithm onto the slow direction of FDOCT scan (Y-direction). Because the time interval between adjacent B-frames is much longer than that between adjacent A-lines, UHS-OMAG can achieve much higher flow sensitivity compared to the conventional OMAG. In addition, the UHS-OMAG usually employed high frame rate (typically 300 frames per second) to achieve 3D scan, it cost much less time to finish one 3D scan compared to the traditional OMAG. However, when it was applied to visualize vasculature map of human tissue, the motion artifacts caused by the inevitable movements is still the biggest challenge. Based on the phase difference calculated from two adjacent B-frames, a new phase compensation algorithm was developed. Aim 4: Developing ultrahigh speed Spectral Domain OCT system through sequentially controlling two high speed line scan CMOS cameras. Two identical high speed line cameras were employed to build two home build high speed spectrometers. Through sequentially controlling the reading time period of two cameras, the imaging speed of the whole system could reach twice higher than the single camera system. The newly built 800 nm SDOCT system which can work at 500, 000 Hz A-lines capturing speed was then used to achieve in vivo 3D imaging in both high speed and large field of view mode. In addition, through combining with the OMAG algorithm, the newly developed system is capable of providing detailed micro-vasculature imaging of human retina and optic nerve head. (Abstract shortened by UMI.)

  7. Assessment of visual function by optical coherence tomography and visual field for craniopharyngioma patients

    Directory of Open Access Journals (Sweden)

    Yang Tang

    2015-09-01

    Full Text Available AIM:To analyze the differences and correlations between ganglion cell complex(GCC, peripapillary retinal nerve fiber layer(pRNFLand mean defect(MD, mean sensitivity(MSof visual field(VFin craniopharyngioma patients, to evaluate the feasibility of optical coherence tomography(OCTin diagnosis of the visual pathway damage of craniopharyngioma patients.METHODS:Ninety-five craniopharyngioma patients treated in Beijing Tiantan Hospital, from September 2014 to April 2015 received the VF test by Octopus 900 automated perimeter with the central 30 degree program and the mean thickness measurements of GCC and pRNFL by RTVue OCT. Spearman rank correlation coefficient(rswas used to assess the correlation between GCC, pRNFL and MD, MS. The changes of VF and optic disc were analyzed. RESULTS: Abnormal pRNFL findings occurred in 53.1%(93/175, which included optic disk edema 3.4%(6/175, atrophic changes of optic nerve 47.4%(83/175and glaucoma-like optic neuropathy 7.4%(13/175. Various visual field defect was 71.4%(125/175. The average thickness of binocular pRNFL(rsOD=-0.411, rsOS=-0.354and GCC(rsOD=-0.400, rsOS=-0.314had correlation with MD(PrsOD=0.412, rsOS=0.342and GCC(rsOD=0.414, rsOS=0.299had correlation with MS(PCONCLUSION: The average thickness of pRNFL and GCC has correlation with VF damage, can evaluate the optic nerve damage of craniopharyngioma patients quantitatively. The thinner the thickness of pRNFL and GCC is, the serious damage of visual function is. During the clinical work, visual field test combined with OCT are helpful to find and assess the damage of visual pathway and prognosis.

  8. Apices of maxillary premolars observed by swept source optical coherence tomography

    Science.gov (United States)

    Ebihara, Arata; Iino, Yoshiko; Yoshioka, Toshihiko; Hanada, Takahiro; Sunakawa, Mitsuhiro; Sumi, Yasunori; Suda, Hideaki

    2015-02-01

    Apicoectomy is performed for the management of apical periodontitis when orthograde root canal treatment is not possible or is ineffective. Prior to the surgery, cone beam computed tomography (CBCT) examination is often performed to evaluate the lesion and the adjacent tissues. During the surgical procedure, the root apex is resected and the resected surface is usually observed under dental operating microscope (DOM). However, it is difficult to evaluate the details and the subsurface structure of the root using CBCT and DOM. A new diagnostic system, swept source optical coherence tomography (SS-OCT), has been developed to observe the subsurface anatomical structure. The aim of this study was to observe resected apical root canals of human maxillary premolars using SS-OCT and compare the findings with those observed using CBCT and DOM. Six extracted human maxillary premolars were used. After microfocus computed tomography (Micro CT; for gold standard) and CBCT scanning of the root, 1 mm of the apex was cut perpendicular to the long axis of the tooth. Each resected surface was treated with EDTA, irrigated with saline solution, and stained with methylene blue dye. The resected surface was observed with DOM and SS-OCT. This sequence was repeated three times. The number of root canals was counted and statistically evaluated. There was no significant difference in the accuracy of detecting root canals among CBCT, DOM and SS-OCT (p > 0.05, Wilcoxon test). Because SS-OCT can be used in real time during surgery, it would be a useful tool for observing resected apical root canals.

  9. A quantitative spatial comparison of high-density diffuse optical tomography and fMRI cortical mapping

    OpenAIRE

    Eggebrecht, Adam T.; White, Brian R.; Ferradal, Silvina L.; Chen, Chunxiao; Zhan, Yuxuan; Snyder, Abraham Z.; DEHGHANI, Hamid; Culver, Joseph P.

    2012-01-01

    Functional neuroimaging commands a dominant role in current neuroscience research. However its use in bedside clinical and certain neuro-scientific studies has been limited because the current tools lack the combination of being non-invasive, non-ionizing and portable while maintaining moderate resolution and localization accuracy. Optical neuroimaging satisfies many of these requirements, but, until recent advances in high-density diffuse optical tomography (HD-DOT), has been hampered by lim...

  10. Optical coherence tomography detection of shear wave propagation in inhomogeneous tissue equivalent phantoms and ex-vivo carotid artery samples

    OpenAIRE

    Razani, Marjan; Luk, Timothy W. H.; Mariampillai, Adrian; Siegler, Peter; Kiehl, Tim-Rasmus; Kolios, Michael C.; Yang, Victor X.D.

    2014-01-01

    In this work, we explored the potential of measuring shear wave propagation using optical coherence elastography (OCE) in an inhomogeneous phantom and carotid artery samples based on a swept-source optical coherence tomography (OCT) system. Shear waves were generated using a piezoelectric transducer transmitting sine-wave bursts of 400 ?s duration, applying acoustic radiation force (ARF) to inhomogeneous phantoms and carotid artery samples, synchronized with a swept-source OCT (SS-OCT) imagin...

  11. Measurement of impinging butane flame using combined optical system with digital speckle tomography

    Science.gov (United States)

    Ko, Han Seo; Ahn, Seong Soo; Kim, Hyun Jung

    2011-11-01

    Three-dimensional density distributions of an impinging and eccentric flame were measured experimentally using a combined optical system with digital speckle tomography. In addition, a three-dimensional temperature distribution of the flame was reconstructed from an ideal gas equation based on the reconstructed density data. The flame was formed by the ignition of premixed butane/air from air holes and impinged upward against a plate located 24 mm distance from the burner nozzle. In order to verify the reconstruction process for the experimental measurements, numerically synthesized phantoms of impinging and eccentric flames were derived and reconstructed using a developed three-dimensional multiplicative algebraic reconstruction technique (MART). A new scanning technique was developed for the accurate analysis of speckle displacements necessary for investigating the wall jet regions of the impinging flame at which a sharp variation of the flow direction and pressure gradient occur. The reconstructed temperatures by the digital speckle tomography were applied to the boundary condition for numerical analysis of a flame impinged plate. Then, the numerically calculated temperature distribution of the upper side of the flame impinged plate was compared to temperature data taken by an infrared camera. The absolute average uncertainty between the numerical and infrared camera data was 3.7%.

  12. Stochastic optical tomography using beta-distributed parameters to model absorption, lifetime, and quantum efficiency

    Science.gov (United States)

    Eppstein, Margaret J.; Dougherty, David E.; Troy, Tamara L.; Sevick-Muraca, Eva M.

    1999-07-01

    Stochastic methods originally devised for geophysical tomography are adapted to the biomedical optical tomography problem. Frequency domain measurements of modulated NIR light are inverted using a Bayesian approximate extended Kalman filter. Minimum variance updates for the linearized problem are calculated from explicit models of the parameters error covariance, the covariance of the system noise, and the measurement error covariance. The method is not iterative per se, but may be applied iteratively to account for strong nonlinearities. Data-driven zonation is used to dynamically reduce the parameterization for improved efficiency, sensitivity, and stability of the inversion. By modeling the parameters as beta distributed random variables, estimates are kept within feasible limits without ad hoc adjustments. In preliminary studies using synthetic domains we have successfully resolved spatially heterogeneous parameters such as absorption, fluorescence lifetime, and quantum efficiency. The method is shown to be much more accurate and computationally efficient than a more traditional Newton-Raphson method. On a 33 by 33 grid, distributed values of a single unknown parameter can be accurately identified in under 2 minutes on a 350 MHz Pentium.

  13. Guidance of hard tissue ablation by forward-viewing optical coherence tomography

    Science.gov (United States)

    Webster, Paul J. L.; Leung, Benjamin Y. C.; Yang, Victor X. D.; Fraser, James M.

    2010-02-01

    A key issue in laser surgery is the inability for the human operator to stop the laser irradiation in time while cutting/ablating delicate tissue layers. In the present work, we forward-image through the laser machining front in complex biological tissue (dense bovine bone) to monitor the incision's approach to subsurface interfaces in real-time (47-312 kHz line rate). Feedback from imaging is used to stop the drilling process within 150 micron of a targeted interface. This is accomplished by combining the high temporal and spatial resolution of infrared optical coherence tomography (OCT) with a robust, turn-key, high brightness fiber laser. The high sensitivity of the imaging system (~100 dB) permit imaging through the rapidly changing beam path even with the additional scattering caused by the thermal cutting process. In spectral-domain OCT, the imaging acquisition period is easily locked to the machining laser exposure. Though motion-induced artifacts reduce interface contrast, they do not introduce incorrect depth measurements as found in other OCT variants. Standard tomography imaging of the tissue (B-scans) is also recorded in situ before and after laser processing to highlight morphology changes.

  14. The impact of multifocal intraocular lens in retinal imaging with optical coherence tomography.

    Science.gov (United States)

    Dias-Santos, Arnaldo; Costa, Lívio; Lemos, Vanessa; Anjos, Rita; Vicente, André; Ferreira, Joana; Cunha, João Paulo

    2014-11-01

    Multifocal intraocular lenses (MF IOLs) have concentric optical zones with different dioptric power, enabling patients to have good visual acuity at multiple focal points. However, several optical limitations have been attributed to this particular design. The purpose of this study is to access the effect of MF IOLs design on the accuracy of retinal optical coherence tomography (OCT). Cross-sectional study conducted at the Refractive Surgery Department of Central Lisbon Hospital Center. Twenty-three eyes of 15 patients with a diffractive MF IOL and 27 eyes of 15 patients with an aspheric monofocal IOL were included in this study. All patients underwent OCT macular scans using Heidelberg Spectralis(®). Macular thickness and volume values and image quality (Q factor) were compared between the two groups. There were no statistically significant differences between both groups regarding macular thickness or volume measurements. Retinal OCT image quality was significantly lower in the MF IOL group (p < 0.01). MF IOLs are associated with a significant decrease in OCT image quality. However, this fact does not seem to compromise the accuracy of spectral domain OCT retinal measurements. PMID:25381578

  15. Human retinal imaging using visible-light optical coherence tomography guided by scanning laser ophthalmoscopy.

    Science.gov (United States)

    Yi, Ji; Chen, Siyu; Shu, Xiao; Fawzi, Amani A; Zhang, Hao F

    2015-10-01

    We achieved human retinal imaging using visible-light optical coherence tomography (vis-OCT) guided by an integrated scanning laser ophthalmoscopy (SLO). We adapted a spectral domain OCT configuration and used a supercontinuum laser as the illumating source. The center wavelength was 564 nm and the bandwidth was 115 nm, which provided a 0.97 µm axial resolution measured in air. We characterized the sensitivity to be 86 dB with 226 µW incidence power on the pupil. We also integrated an SLO that shared the same optical path of the vis-OCT sample arm for alignment purposes. We demonstrated the retinal imaging from both systems centered at the fovea and optic nerve head with 20° × 20° and 10° × 10° field of view. We observed similar anatomical structures in vis-OCT and NIR-OCT. The contrast appeared different from vis-OCT to NIR-OCT, including slightly weaker signal from intra-retinal layers, and increased visibility and contrast of anatomical layers in the outer retina. PMID:26504622

  16. Derivation of a Monte Carlo method for modeling heterodyne detection in optical coherence tomography systems

    DEFF Research Database (Denmark)

    Tycho, Andreas; JØrgensen, Thomas Martini

    2002-01-01

    A Monte Carlo (MC) method for modeling optical coherence tomography (OCT) measurements of a diffusely reflecting discontinuity emb edded in a scattering medium is presented. For the first time to the authors' knowledge it is shown analytically that the applicability of an MC approach to this optical geometry is firmly justified, because, as we show, in the conjugate image plane the field reflected from the sample is delta-correlated from which it follows that the heterodyne signal is calculated from the intensity distribution only. This is not a trivial result because, in general, the light from the sample will have a finite spatial coherence that cannot be accounted for by MC simulation. To estimate this intensity distribution adequately we have developed a novel method for modeling a focused Gaussian beam in MC simulation. This approach is valid for a softly as well as for a strongly focused beam, and it is shown that in free space the full three-dimensional intensity distribution of a Gaussian beam is obtained. The OCT signal and the intensity distribution in a scattering medium have been obtained for several geometries with the suggested MC method; when this model and a recently published analytical model based on the extended Huygens-Fresnel principle are compared, excellent agreement is found. (C) 2002 Optical Society of America.

  17. Sophisticated test objects for the quality assurance of optical computed tomography scanners

    International Nuclear Information System (INIS)

    Optical computed tomography (CT), in conjunction with radiochromic gels and plastics, shows great potential for radiation therapy dose verification in 3D. However, an effective quality assurance (QA) regime for the various scanners currently available still remains to be developed. We show how the favourable properties of the PRESAGE (registered) radiochromic polymer may be exploited to create highly sophisticated QA phantoms. Five 60 mm diameter cylindrical PRESAGE (registered) samples were irradiated using the x-ray microbeam radiation therapy facility on the ID-17 biomedical beamline at the European Synchrotron Radiation Facility. Samples were then imaged on the University of Surrey parallel-beam optical CT scanner. The sample irradiations were designed to allow a variety of tests to be performed, including assessments of linearity, modulation transfer function (three independent measurements), geometric distortion and the effect of treatment fractionation. It is clear that, although the synchrotron method produces extremely high-quality test objects, it is not practical on a routine basis, because of its reliance on a highly specialized radiation source. Hence, we investigated a second possibility: three PRESAGE (registered) samples were illuminated with ultraviolet light of wavelength 365 nm, using cheap masks created by laser-printing patterns onto overhead projector acetate sheets. There was good correlation between optical densities measured by the CT scanner and the expected UV 'dose' delivered. The results are encouraging and a proposal is made for a scanner test regime based on calibrated and well-characterized PRESAGE (registered) samples.

  18. Effect of red blood cell aggregation and sedimentation on optical coherence tomography signals from blood samples

    International Nuclear Information System (INIS)

    In this work, Monte Carlo simulation is used to obtain model optical coherence tomography (OCT) signals from a horizontally orientated blood layer at different stages of red blood cell (RBC) aggregation and sedimentation processes. The parameters for aggregating and sedimenting blood cells were chosen based on the data available from the literature and our earlier experimental studies. We consider two different cases: a suspension of washed RBCs in physiological solution (where aggregation does not take place) and RBCs in blood plasma (which provides necessary conditions for aggregation). Good agreement of the simulation results with the available experimental data shows that the chosen optical parameters are reasonable. The dependence of the numbers of photons contributing to the OCT signal on the number of experienced scattering events was analysed for each simulated signal. It was shown that the maxima of these dependences correspond to the peaks in the OCT signals related to the interfaces between the layers of blood plasma and blood cells. Their positions can be calculated from the optical thicknesses of the layers, and the absorption and scattering coefficients of the media

  19. Comparison of computed tomography- and optical image-based assessment of liposome distribution.

    Science.gov (United States)

    Huang, Huang; Dunne, Michael; Lo, John; Jaffray, David A; Allen, Christine

    2013-05-01

    The use of multimodal imaging as a tool to assess the in vivo pharmacokinetics and biodistribution of nanocarriers is important in understanding the nature of their in vivo transport. The current study reports the development of a nano-sized liposomal computed tomographic (CT)/optical imaging probe carrying iohexol and Cy5.5 and its use in micro-CT and optical imaging to quantitatively assess the whole-body (macroscopic), intratumoral, and microscopic distribution over a period of 8 days. These multimodal liposomes have a vascular half-life of 30.3 ± 8.9 hours in mice bearing subcutaneous H520 non-small cell lung cancer tumors, with the maximum liposome accumulation in tumor achieved 48 hours postinjection. The in vivo liposome distribution and stability were quantitatively assessed using both micro-CT and fluorescence molecular tomography. The combination of CT and optical imaging enables visualization of the liposomes at the whole-body, tumor, and cellular scales with high sensitivity. Such noninvasive tracking of therapeutic vehicles at the macro- and microscale is important for informed and rational development of novel nanocarrier systems. PMID:23490441

  20. Creation of sophisticated test objects for quality assurance of optical computed tomography scanners

    International Nuclear Information System (INIS)

    Optical computed tomography (CT) shows great potential for radiation therapy dose verification in 3D. However, an effective quality assurance regime for the various scanners currently available still remains to be developed. We show how the favourable properties of the PRESAGETM radiochromic polymer may be exploited to create highly sophisticated QA phantoms. Five 60 mm-diameter cylindrical PRESAGETM samples were irradiated using the x-ray microbeam radiation therapy facility on the ID17 biomedical beamline at the European Synchrotron Radiation Facility. Samples were then imaged on the University of Surrey parallel-beam optical CT scanner and were designed to allow a variety of tests to be performed, including linearity, MTF (three independent measurements) and an assessment of geometric distortion. A small sample of these results is presented. It is clear that, although the method produces extremely high quality test objects, it is not practical on a routine basis, because of its reliance of a highly specialised radiation source. Hence, we investigated a second possibility. Two PRESAGETM samples were illuminated with ultraviolet light of wavelength 365 nm, using cheap masks created by laser-printing patterns onto overhead projector acetate sheets. There was good correlation between optical density (OD) measured by the CT scanner and the expected UV 'dose' delivered. The results are highly encouraging and a proposal is made for a scanner test regime based on calibrated and well characterised PRESAGETM samples.

  1. Small field dose delivery evaluations using cone beam optical computed tomography-based polymer gel dosimetry

    International Nuclear Information System (INIS)

    This paper explores the combination of cone beam optical computed tomography with an N-isopropylacrylamide (NIPAM)-based polymer gel dosimeter for three-dimensional dose imaging of small field deliveries. Initial investigations indicate that cone beam optical imaging of polymer gels is complicated by scattered stray light perturbation. This can lead to significant dosimetry failures in comparison to dose readout by magnetic resonance imaging (MRI). For example, only 60% of the voxels from an optical CT dose readout of a 1 l dosimeter passed a two-dimensional Low's gamma test (at a 3%, 3 mm criteria, relative to a treatment plan for a well-characterized pencil beam delivery). When the same dosimeter was probed by MRI, a 93% pass rate was observed. The optical dose measurement was improved after modifications to the dosimeter preparation, matching its performance with the imaging capabilities of the scanner. With the new dosimeter preparation, 99.7% of the optical CT voxels passed a Low's gamma test at the 3%, 3 mm criteria and 92.7% at a 2%, 2 mm criteria. The fitted interjar dose responses of a small sample set of modified dosimeters prepared (a) from the same gel batch and (b) from different gel batches prepared on the same day were found to be in agreement to within 3.6% and 3.8%, respectively, over the full dose range. Without drawing any statistical conclusions, this experiment gives a preliminary indication that intrabatch or interbatch NIPAM dosimeters prepared on the same day should be suitable for dose sensitivity calibration. (author)

  2. Dynamic contrast-enhanced diffuse optical tomography (DCE-DOT): experimental validation with a dynamic phantom

    International Nuclear Information System (INIS)

    Dynamic contrast-enhanced diffuse optical tomography (DCE-DOT) can provide spatially resolved enhancement kinetics of an optical contrast agent. We undertook a systematic phantom study to evaluate the effects of the geometrical parameters such as the depth and size of the inclusion as well as the optical parameters of the background on the recovered enhancement kinetics of the most commonly used optical contrast agent, indocyanine green (ICG). For this purpose a computer-controlled dynamic phantom was constructed. An ICG-intralipid-water mixture was circulated through the inclusions while the DCE-DOT measurements were acquired with a temporal resolution of 16 s. The same dynamic study was repeated using inclusions of different sizes located at different depths. In addition to this, the effect of non-scattering regions was investigated by placing a second inclusion filled with water in the background. The phantom studies confirmed that although the peak enhancement varied substantially for each case, the recovered injection and dilution rates obtained from the percentage enhancement maps agreed within 15% independent of not only the depth and the size of the inclusion but also the presence of a non-scattering region in the background. Although no internal structural information was used in these phantom studies, it may be necessary to use it for small objects buried deep in tissue. However, the different contrast mechanisms of optical and other imaging modalities as well as imperfect co-registration between both modalities may lead to potential errors in the structural a priori. Therefore, the effect of erroneous selection of structural priors was investigated as the final step. Again, the injection and dilution rates obtained from the percentage enhancement maps were also immune to the systematic errors introduced by erroneous selection of the structural priors, e.g. choosing the diameter of the inclusion 20% smaller increased the peak enhancement 60% but changed the injection and dilution rates only less than 10%.

  3. Detection of photoreceptor disruption by adaptive optics fundus imaging and Fourier-domain optical coherence tomography in eyes with occult macular dystrophy

    OpenAIRE

    Tatsuo Yamaguchi; Shunji Kusaka; Yoshiyuki Kitaguchi; et. al.

    2011-01-01

    Yoshiyuki Kitaguchi1, Shunji Kusaka1, Tatsuo Yamaguchi2, Toshifumi Mihashi2, Takashi Fujikado11Department of Applied Visual Science, Osaka University Graduate School of Medicine, Osaka, Japan; 2Topcon Research Institute, Itabashi, JapanPurpose: To investigate the structural changes in the photoreceptors by adaptive optics (AO) fundus imaging and Fourier-domain optical coherence tomography (FD-OCT) in eyes with occult macular dystrophy (OMD).Design: Observational case reports.Methods: Eight ey...

  4. Cartilage disease diagnosis by conventional and polarization-sensitive optical coherence tomography

    Science.gov (United States)

    Xie, Tuqiang; Guo, Shuguang; Rao, Bing; Chen, Zhongping; Peavy, George M.

    2005-04-01

    In this paper, the conventional and polarization sensitive optical coherence tomography (PS-OCT) were used to image bovine articular cartilage and diagnose degenerative joint disease. The results showed that these 2D cross-sectional OCT images that can cover an area of 6×2.8mm2 (limited by scope size) with a traverse resolution of 12 ?m and an axial resolution of 10 ?m could assess the microstructure of articular cartilage and differentiate the abnormalities in structure. The results were confirmed by their histology. Compared to conventional OCT, PS-OCT could provide depth-resolved strokes parameter images, which reflect tissue birefringence. Both conventional and PS-OCT have high efficiency and sensitivity of osteoarthritis and cartilage injury and disease diagnosis.

  5. Optical coherence tomography in a patient with chloroquine-induced maculopathy

    Directory of Open Access Journals (Sweden)

    Korah Sanita

    2008-01-01

    Full Text Available We herein report the optical coherence tomography (OCT findings in a case of chloroquine-induced macular toxicity, which to our knowledge, has so far not been reported. A 53-year-old lady on chloroquine for treatment of rheumatoid arthritis developed decrease in vision 36 months after initiation of the treatment. Clinical examination revealed evidence of retinal pigment epithelial (RPE disturbances. Humphrey field analyzer (HFA, fundus fluorescein angiography (FFA and OCT for retinal thickness and volume measurements at the parafoveal region were done. The HFA revealed bilateral superior paracentral scotomas, FFA demonstrated RPE loss and OCT revealed anatomical evidence of loss of ganglion cell layers, causing marked thinning of the macula and parafoveal region. Parafoveal retinal thickness and volume measurements may be early evidence of chloroquine toxicity, and OCT measurements as a part of chloroquine toxicity screening may be useful in early detection of chloroquine maculopathy.

  6. Doppler mapping of an alternating-sign flow with complex geometry using optical coherence tomography

    Energy Technology Data Exchange (ETDEWEB)

    Proskurin, S G; Potlov, A Yu; Frolov, S V [Tambov State Technical University, Tambov (Russian Federation)

    2014-01-31

    The method of sign-sensitive mapping of the given range of velocities in a flow with complex geometry based on the principles of optical coherence tomography is described. To produce an alternating-sign flow, the 1% aqueous intralipid solution and the tilted capillary entry with the contraction coefficient 4:1 are used. The mapping is controlled using two parameters, the value of one specific velocity (OSV) for mapping and the accuracy of its determination. The structure image and two OSV images (for positive and negative direction of motion) are obtained as a result of selecting and processing the relevant parts of the signal spectrum. The final image is a result of summing these three images and can be used as a Doppler equivelocity contour map. (radiation scattering)

  7. Pupil tracking optical coherence tomography for precise control of pupil entry position.

    Science.gov (United States)

    Carrasco-Zevallos, Oscar; Nankivil, Derek; Keller, Brenton; Viehland, Christian; Lujan, Brandon J; Izatt, Joseph A

    2015-09-01

    To maximize the collection efficiency of back-scattered light, and to minimize aberrations and vignetting, the lateral position of the scan pivot of an optical coherence tomography (OCT) retinal scanner should be imaged to the center of the ocular pupil. Additionally, several retinal structures including Henle's Fiber Layer (HFL) exhibit reflectivities that depend on illumination angle, which can be controlled by varying the pupil entry position of the OCT beam. In this work, we describe an automated method for controlling the lateral pupil entry position in retinal OCT by utilizing pupil tracking in conjunction with a 2D fast steering mirror placed conjugate to the retinal plane. We demonstrate that pupil tracking prevents lateral motion artifacts from impeding desired pupil entry locations, and enables precise pupil entry positioning and therefore control of the illumination angle of incidence at the retinal plane. We use our prototype pupil tracking OCT system to directly visualize the obliquely oriented HFL. PMID:26417510

  8. Polarization-sensitive optical coherence tomography system tolerant to fiber disturbances using a line camera.

    Science.gov (United States)

    Marques, Manuel J; Rivet, Sylvain; Bradu, Adrian; Podoleanu, Adrian

    2015-08-15

    This Letter presents a spectral-domain, polarization-sensitive optical coherence tomography (PS-OCT) system, where the light collection from the two arms of the interferometer is performed exclusively using single-mode fibers and couplers, and the two orthogonal polarization components are sequentially detected by a single line camera. Retardance measurements can be affected by polarimetric effects because of fiber birefringence and diattenuation in fiber couplers. This configuration bypasses such issues by performing polarization selection before the collection fiber through the combination of a polarization rotator and a linear polarizer. Retardance calibration is achieved with a Berek compensator. Similar net retardance maps of a birefringent phantom are obtained for two different settings of induced fiber birefringence, effectively demonstrating the tolerance of the configuration to fiber-based disturbances. PMID:26274678

  9. Stage-based frequency-modulated full-range complex Fourier-domain optical coherence tomography

    Science.gov (United States)

    Bian, Haiyi; Gao, Wanrong

    2015-10-01

    We propose a simple method to modulate spatial interferogram to achieve full-range complex imaging in Fourier-domain optical coherence tomography, in which a sample stage is employed which can be adjusted to introduce a constant carrier frequency into the interference signal during the B-scan by adjusting the stage angle with respect to the normal to the object under test. An additional phase, which is linearly related to the lateral position, is then induced in the A-scan. The in vivo images of human skin were generated which demonstrate that the method proposed can generate the cross-sectional image with the same quality with that obtained with other methods and with the advantage of the simplicity in implementation.

  10. Stage-based frequency-modulated full-range complex Fourier-domain optical coherence tomography

    Science.gov (United States)

    Bian, Haiyi; Gao, Wanrong

    2015-07-01

    We propose a simple method to modulate spatial interferogram to achieve full-range complex imaging in Fourier-domain optical coherence tomography, in which a sample stage is employed which can be adjusted to introduce a constant carrier frequency into the interference signal during the B-scan by adjusting the stage angle with respect to the normal to the object under test. An additional phase, which is linearly related to the lateral position, is then induced in the A-scan. The in vivo images of human skin were generated which demonstrate that the method proposed can generate the cross-sectional image with the same quality with that obtained with other methods and with the advantage of the simplicity in implementation.

  11. Qualitative investigation of fresh human scalp hair with full-field optical coherence tomography

    Science.gov (United States)

    Choi, Woo June; Pi, Long-Quan; Min, Gihyeon; Lee, Won-Soo; Lee, Byeong Ha

    2012-03-01

    We have investigated depth-resolved cellular structures of unmodified fresh human scalp hairs with ultrahigh-resolution full-field optical coherence tomography (FF-OCT). The Linnik-type white light interference microscope has been home-implemented to observe the micro-internal layers of human hairs in their natural environment. In hair shafts, FF-OCT has qualitatively revealed the cellular hair compartments of cuticle and cortex layers involved in keratin filaments and melanin granules. No significant difference between black and white hair shafts was observed except for absence of only the melanin granules in the white hair, reflecting that the density of the melanin granules directly affects the hair color. Anatomical description of plucked hair bulbs was also obtained with the FF-OCT in three-dimensions. We expect this approach will be useful for evaluating cellular alteration of natural hairs on cosmetic assessment or diagnosis of hair diseases.

  12. MONSTIR II: A 32-channel, multispectral, time-resolved optical tomography system for neonatal brain imaging

    Energy Technology Data Exchange (ETDEWEB)

    Cooper, Robert J., E-mail: robert.cooper@ucl.ac.uk; Magee, Elliott; Everdell, Nick; Magazov, Salavat; Varela, Marta; Airantzis, Dimitrios; Gibson, Adam P.; Hebden, Jeremy C. [Biomedical Optics Research Laboratory, Department of Medical Physics and Bioengineering, University College London, London WC1E 6BT (United Kingdom)

    2014-05-15

    We detail the design, construction and performance of the second generation UCL time-resolved optical tomography system, known as MONSTIR II. Intended primarily for the study of the newborn brain, the system employs 32 source fibres that sequentially transmit picosecond pulses of light at any four wavelengths between 650 and 900 nm. The 32 detector channels each contain an independent photo-multiplier tube and temporally correlated photon-counting electronics that allow the photon transit time between each source and each detector position to be measured with high temporal resolution. The system's response time, temporal stability, cross-talk, and spectral characteristics are reported. The efficacy of MONSTIR II is demonstrated by performing multi-spectral imaging of a simple phantom.

  13. Real-time surface tracking system using common-path spectral domain optical coherence tomography

    Science.gov (United States)

    Kim, Keo-Sik; Park, Hyoung-Jun; Kang, Hyun Seo; Kang, Jin U.; Song, Chul-Gyu

    2012-11-01

    An enhanced surface tracking system based on optical coherence tomography (OCT) modality has been developed and tested for use in a surgical guidance system. A surface detection algorithm based on a Savitzky-Golay filter of A-scan data and thresholding was applied to real-time depth tracking. The algorithm output controlled a motorized stage to adjust the probe position according to the sample's topological variance in real-time. As a result, the root mean square error (RMSE: 4.2 ?m) of our algorithm was relatively lower than the conventional method (RMSE: 16.6 ?m). Also, OCT images obtained using the algorithm showed a significantly extended imaging range and active surface tracking in real time. Consequently, the devised method demonstrated potential for use in systems for guiding surgical robots and endoscopic OCT.

  14. Fast acquisition and reconstruction of optical coherence tomography images via sparse representation.

    Science.gov (United States)

    Fang, Leyuan; Li, Shutao; McNabb, Ryan P; Nie, Qing; Kuo, Anthony N; Toth, Cynthia A; Izatt, Joseph A; Farsiu, Sina

    2013-11-01

    In this paper, we present a novel technique, based on compressive sensing principles, for reconstruction and enhancement of multi-dimensional image data. Our method is a major improvement and generalization of the multi-scale sparsity based tomographic denoising (MSBTD) algorithm we recently introduced for reducing speckle noise. Our new technique exhibits several advantages over MSBTD, including its capability to simultaneously reduce noise and interpolate missing data. Unlike MSBTD, our new method does not require an a priori high-quality image from the target imaging subject and thus offers the potential to shorten clinical imaging sessions. This novel image restoration method, which we termed sparsity based simultaneous denoising and interpolation (SBSDI), utilizes sparse representation dictionaries constructed from previously collected datasets. We tested the SBSDI algorithm on retinal spectral domain optical coherence tomography images captured in the clinic. Experiments showed that the SBSDI algorithm qualitatively and quantitatively outperforms other state-of-the-art methods. PMID:23846467

  15. Analysis on optical coherence tomography in Vogt-Koyanagi-Harada syndrome before and after therapy

    Directory of Open Access Journals (Sweden)

    Yan Zhang

    2014-04-01

    Full Text Available AIM: To analyze features of optical coherence tomography(OCTin Vogt-Koyanagi-Harada syndrome before and after therapy.METHODS: Thirty-four eyes of 17 patients, which were identified as Vogt-Koyanagi-Harada syndrome, were examined with OCT and fundus photography, after the treatment of steroid therapy, the change of retinal structure were observed after 5, 15, 30d. RESULTS: OCT revealed retinal neuroepithelial edema and serous detachment of retinal neuroepithelia and subretinal septa that divided the subretinal space into several compartments all of cases. After steroid therapy, the retinal edema, serous detachment and subretinal septa were improved, even resolved completely. CONCLUSION: OCT can observe retinal structural change of Vogt-Koyanagi-Harada syndrome before and after therapy, it is vital for diagnosis and treatment evaluation of the disease.

  16. Polarization memory effect in optical coherence tomography and dental imaging application

    Science.gov (United States)

    Chen, Yueli; Otis, Linda; Zhu, Quing

    2011-08-01

    We report the existence of polarization memory effect (PME) in optical coherence tomography and investigate its potential applications in dental imaging. We performed the study in three steps. First, microsphere scattering phantoms of different sizes were imaged in order to validate experimental results with PME theory. Both linearly and circularly polarized light were used to probe the samples. Second, healthy tooth samples were scanned and polarization memory effect was identified in dentin. In this step, specific verification and signal processing were performed to rule out possible image interpretation by birefringence effect. Third, we evaluated dentin demineralization with PME. Results show polarization memory can be useful to characterize this dynamic mineralization process for early caries detection and rehabilitation.

  17. In vivo Evaluation of Enamel Dental Restoration Interface by Optical Coherence Tomography

    International Nuclear Information System (INIS)

    In this work, we report in vivo application of Optical Coherence Tomography (OCT) to assess dental restorations in humans. After approval by the Ethical Committee in Humans Research of the Federal University of Pernambuco, thirty patients with resin composite restorations performed in anterior teeth were selected. The patients were clinically evaluated, and OCT was performed. Images were obtained using OCT operating in the spectral domain, with a 840 nm super luminescent diode light source (spectral width of 50 nm, fiber output power 25mW and a measured spatial resolution of 10 ?m). The image acquisition time was less than one second. The results were analyzed with respect to the integrity and marginal adaptation of the restoration. Using appropriate software, the lesion region can be exactly located and a new restoration procedure can be carried out. We have shown that OCT is more than adequate in clinical practice to assess dental restorations. (Author)

  18. Diagnostic blood-flow monitoring during therapeutic interventions using color Doppler optical coherence tomography

    Science.gov (United States)

    Yazdanfar, Siavash; Kulkarni, Manish D.; Wong, Richard C. K.; Sivak, Michael J., Jr.; Willis, Joseph; Barton, Jennifer K.; Welch, Ashley J.; Izatt, Joseph A.

    1998-04-01

    A recently developed modality for blood flow measurement holds high promise in the management of bleeding ulcers. Color Doppler optical coherence tomography (CDOCT) uses low- coherence interferometry and digital signal processing to obtain precise localization of tissue microstructure simultaneous with bi-directional quantitation of blood flow. We discuss CDOCT as a diagnostic tool in the management of bleeding gastrointestinal lesions. Common treatments for bleeding ulcers include local injection of a vasoconstrictor, coagulation of blood via thermal contact or laser treatment, and necrosis of surrounding tissue with a sclerosant. We implemented these procedures in a rat dorsal skin flap model, and acquired CDOCT images before and after treatment. In these studies, CDOCT succeeded in identifying cessation of flow before it could be determined visually. Hence, we demonstrate the diagnostic capabilities of CDOCT in the regulation of bleeding in micron-scale vessels.

  19. Correlation between the optical coherence tomography and electroretinogram in retinal vein occlusion macular edema

    Directory of Open Access Journals (Sweden)

    Ya Xu

    2014-11-01

    Full Text Available AIM: To evaluate the correlation between retinal thickness and photopic flash electroretinogram(ERGparameters(Cone a-wave, Cone b-wave, and 30Hz flickerin patients with central retinal vein occlusion(CRVOand macular edema. METHODS: A total of 25 patients(25 CRVO eyes and 25 unaffected fellow eyeswith CRVO underwent the examination of optical coherence tomography(OCTand photopic falsh ERG. The amplitude and implicit time of the ERG parameters were extracted from the ERG traces. Retinal thicknesses were measured by OCT in nine macular subfields. Then the correlations between ERG parameters and macular morphological parameters were analyzed. RESULTS: The Cone b-wave and 30Hz flicker implicit time were correlated with macular retinal thickness in seven out of nine subfields, excluding the temporal subfields. CONCLUSION: The retinal thickness of the macular edema may be associated with inner retinal function in CRVO patients.

  20. Microperimetry and optical coherent tomography in patients operated on y the conventional retinal detachment surgery

    International Nuclear Information System (INIS)

    A descriptive study was made to determine the visual acuity, microperimetry and optical coherence tomography in patients operated on by the conventional rhegmatogenous retinal detachment at 'Ramon Pando Ferrer' Cuban Ophthalmologic Institute from October 2006 to March 2007. Twenty six patients, who had gone to the hospital with normal values in ophthalmoscopy and biomicroscopy and three-six months of disease development. Better corrected visual acuity, fixation, average sensitivity, morphology and macular thickness were obtained after surgery. Average visual acuity was 0,41 and fixation was stable in most of patients; average retinal sensitivity was 11 decibels. The most frequent finding was serum detachment. Average macular thickness was 246,3 micras. There was no statistical relation between preoperative time of disease development and the macular characteristics of detachment in these tests. (Author)