WorldWideScience
 
 
1

The skin of Osedax (Siboglinidae, Annelida): An ultrastructural investigation of its epidermis  

British Library Electronic Table of Contents (United Kingdom)

The symbiotic polychaetes of the genus Osedax living on the bones of whale carcasses have become known as bone-eating worms. It is believed that whale bones are the source of nutrition for those gutless worms and that fatty acids are produced by their symbionts and transferred to the host. However, the symbionts are of the heterotrophic group Oceanospirillales and as such are not able to synthesize organic carbon de novo. Also, they are not housed in close contact to the bone material. We studied the ultrastructure of the integument overlying the symbiont housing trophosome in the ovisac region and the roots region and of the symbiont-free trunk region of Osedax to investigate the hosts possible contribution in feeding for the whole symbiosis. The epidermis differs conspicuously between th...

2010-01-01

2

Updates on Osteonecrosis of the Jaw  

UK PubMed Central (United Kingdom)

Purpose of reviewOsteonecrosis of the Jaw (ONJ) in an uncommon condition noted to occur in patients with cancer receiving intravenous bisphosphonates. The etiology...Full Text Available

2010-09-01

3

Structure and Composition of the Polychaete Community from Bahia San Quintin, Pacific Coast of Baja California, Mexico  

Science.gov (United States)

... poly-chaete densities and diversity values, probably the oyster aquaculture in BF although not intensive has produced a ... faster (Díaz-Castañeda & Rodriguez-Villanueva 1998). However if oyster aquacultu...

4

Genotoxic damage in polychaetes: A study of species and cell-type sensitivities  

British Library Electronic Table of Contents (United Kingdom)

The marine environment is becoming increasingly contaminated by environmental pollutants with the potential to damage DNA, with marine sediments acting as a sink for many of these contaminants. Understanding genotoxic responses in sediment-dwelling marine organisms, such as polychaetes, is therefore of increasing importance. This study is an exploration of species-specific and cell-specific differences in cell sensitivities to DNA-damaging agents in polychaete worms, aimed at increasing fundamental knowledge of their responses to genotoxic damage. The sensitivities of coelomocytes from three polychaetes species of high ecological relevance, i.e. the lugworm Arenicola marina, the harbour ragworm Nereis diversicolor and the king ragworm Nereis virens to genotoxic damage are compared, and dif...

2008-01-01

5

Survey of the marine benthic infauna collected from the United States radioactive waste disposal sites off the Farallon Islands, California. Final report  

International Nuclear Information System (INIS)

Benthic biological samples were taken in 1977 from the vicinity of the Farallon Islands radioactive waste disposal sites for characterization of the infaunal macroinvertebrates and foraminifera. A total of 120 invertebrate species were collected, of which 75 species (63 percent) were polychaetes. Forty-three of these polychaete species have not previously been reported from depths greater than 1000m. A total of 1044 macroinvertebrate specimens were collected of which 54 percent were polychates. Only the nematods were present at all six benthic stations, but the community structure was dominated by the polychaetes Tauberia gracilis, Allia pulchra, Chaetozone setosa, and Cossura candida. Living and dead foraminifera were reported. The possible role of polychaetes in bioturbation and in the marine food chain is briefly discussed with respect to the various polychaete feeding ...

7

Mechanical Engineering and Design of the LHC Phase II Collimators  

CERN Document Server

Phase II collimators will complement the existing system to improve the expected high RF impedance and limited efficiency of Phase I jaws. An international collaborative effort has been launched to identify novel advanced materials responding to the very challenging requirements of the new collimators. Complex numerical calculations simulating extreme conditions and experimental tests are in progress. In parallel, an innovative modular design concept of the jaw assembly is being developed to allow fitting in alternative materials, minimizing the thermally induced deformations, withstanding accidents and accepting high radiation doses. Phase II jaw assembly is made up of a molybdenum back-stiffener ensuring high geometrical stability and a modular jaw split in threes sectors. Each sector is equipped with a high-efficiency independent cooling circuit. Beam position monitors (BPM) are embedded in the ...

2010-01-01

8

Mites of the genus Neharpyrhynchus Fain (Acariformes, Harpirhynchidae) from Neotropical birds  

UK PubMed Central (United Kingdom)

AbstractThree new species of parasitic mites of the genus Neharpyrhynchus Fain (Acariformes,...Full Text Available

9

MCRLTER: Coral Reef: Population Dynamics: Monitoring Symbiodinium populations in corals of Moorea  

Science.gov (United States)

Coral are symbiotic with photosynthetic dinoflagellates from the genus Symbiodinium. There are eight divergent clades (A-H) within the genus which each ... ...

10

Lugworm exclusion experiment: Responses by deposit feeding worms to biogenic habitat transformations  

British Library Electronic Table of Contents (United Kingdom)

On six 400 m2 plots over 3 years, we excluded the sessile subduction and conveyer-belt feeding polychaete Arenicola marina which generates a pit-and-mound topography at the sediment surface from intertidal sands near the island of Sylt, Germany. This experiment was used to test whether other abundant deposit feeding polychaetes (the discretely motile and surface feeding ragworm Nereis diversicolor and the subsurface-feeding, motile orbiniid polychaete Scoloplos cf. armiger) benefit from competitive release. Ragworms took advantage from the absence of lugworms. Presumably they responded to a more stable and nutritious surface layer at lugworm exclusion plots (relief from inhibitive bioturbation). Contrary to this, S. cf. armiger was negatively affected by the exclusion of A. marina. It may ...

2006-01-01

11

Hearing pathways and directional sensitivity of the beluga whale, Delphinapterus leucas  

British Library Electronic Table of Contents (United Kingdom)

Odontocetes are believed to receive sounds primarily through the pan bone region of the lower jaw although much variation in jaw morphology exists among species. In order to further examine this jaw hearing hypothesis we tested the head receiving sensitivity and directional hearing of a beluga whale, Delphinapterus leucas. Hearing thresholds were measured using auditory evoked potentials (AEPs). The subject proved to have highly directional hearing for far-field click stimuli similar to that of bottlenose dolphins and more directional than the harbor porpoise. For near-field jawphone stimulation, the beluga's lowest thresholds were found when click stimuli were presented at the rostrum tip (76?dB re: 1??Pa) although thresholds from the pan bone region stimulation were only 2?3?dB higher. S...

2008-01-01

12

Review of the genus Hartemita Cameron, 1910 (Hymenoptera, Braconidae, Cardiochilinae), with the description of six new species from Vietnam  

UK PubMed Central (United Kingdom)

AbstractThe Oriental and East Palaearctic genus Hartemita Cameron, 1910 (Braconidae: Cardiochilinae) is recorded...Full Text Available

13

Partial Purification and Characterization of Biological Effects of a Lipid Toxin Produced by Mycobacterium ulcerans  

UK PubMed Central (United Kingdom)

Organisms in the genus Mycobacterium cause a variety of human diseases. One member of the genus, M. ulcerans, causes a necrotizing skin disease called Buruli ulcer....Full Text Available

1998-02-01

14

PCR-based method for targeting 16S-23S rRNA intergenic spacer regions among Vibrio species  

UK PubMed Central (United Kingdom)

BackgroundThe genus Vibrio is a diverse group of Gram-negative bacteria comprised of 74 species. Furthermore, the genus has and is expected to continue expanding...Full Text Available

15

Malaraeus Jordan, 1933: A North American Genus Of Fleas (Siphonaptera: Ceratophyllidae)  

Science.gov (United States)

... eremicus (Baker, 1904). The second species, Malaraeus telchinus (Rothschild, 1905), is the commonest member of the genus. ... described by Baker (1904), Jordan (1929), Kolenati (1857), Rothschild (1922), ...

16

Comparative genomics of the bacterial genus Listeria: Genome evolution is characterized by limited gene acquisition and limited gene loss  

UK PubMed Central (United Kingdom)

BackgroundThe bacterial genus Listeria contains pathogenic and non-pathogenic species, including the pathogens L. monocytogenes and L. ivanovii,...Full Text Available

17

A Suppression Subtractive Hybridization Approach Reveals Niche-Specific Genes That May Be Involved in Predator Avoidance in Marine Synechococcus Isolates  

UK PubMed Central (United Kingdom)

Picocyanobacteria of the genus Synechococcus are important contributors to marine primary production and are ubiquitous in the world's oceans. This genus is genetically diverse, and...Full Text Available

2006-04-01

19

INVESTIGATION OF SELECTED HIGHER PLANTS AS GAS ...  

Science.gov (United States)

... The genus Ipomea contains a species, Ipomea , which contains a purgative (Jl). Ipomea batatus is not known to contain this substance. ...

1962-09-01

20

Modelling the masticatory biomechanics of a pig  

UK PubMed Central (United Kingdom)

The relationships between muscle tensions, jaw motions, bite and joint forces, and craniofacial morphology are not fully understood. Three-dimensional (3-D) computer models are able to combine anatomical...Full Text Available

2002-11-01

 
 
 
 
21

Non-abelian bosonization in higher genus Riemann surfaces  

Energy Technology Data Exchange (ETDEWEB)

We propose a generalization of the character formulas of the SU(2) Kac-Moody algebra to higher genus Riemann surfaces. With this construction, we show that the modular invariant partition funciton of the SO(4) k = 1 Wess-Zumino model is equivalent, in arbitrary genus Riemann surfaces, to that of free fermion theory.

1988-03-31

22

Operational Experience with LHC Collimation  

CERN Document Server

A first sub-set of the collimation system has been installed for the 2008 first beam commissioning of the LHC. It included 88 collimators around the ring and the two injection lines. Each collimator has two jaws for which must be controlled and monitored with high precision. The LHC collimation system was put into operation from July to October 2008. The installed system is described and first results from system operation without and with beam are presented. It is shown that the LHC collimation system achieved the specified accuracy and reproducibility of jaw positioning. Next steps in collimation commissioning are described and planned system upgrades for high beam intensities are outlined.

2009-01-01

23

Topological field theories and duality  

Energy Technology Data Exchange (ETDEWEB)

Topologically non trivial effects appearing in the discussion of duality transformations in higher genus manifold are discussed in a simple example, and their relation with the properties of Topological Field Theories is established. (author). 16 refs.

1996-05-01

24

Phylogenetic relationships in Cortinarius, section Calochroi, inferred from nuclear DNA sequences  

UK PubMed Central (United Kingdom)

BackgroundSection Calochroi is one of the most species-rich lineages in the genus Cortinarius (Agaricales, Basidiomycota) and is widely distributed...Full Text Available

25

Matrix models as CFT: Genus expansion  

International Nuclear Information System (INIS)

We show how the formulation of the matrix models as conformal field theories on a Riemann surfaces can be used to compute the genus expansion of the observables. Here we consider the simplest example of the Hermitian matrix model, where the classical solution is described by a hyperelliptic Riemann surface. To each branch point of the Riemann surface we associate an operator which represents a twist field dressed by the modes of the twisted boson. The partition function of the matrix model is computed as a correlation function of such dressed twist fields. The perturbative construction of the dressing operators yields a set of Feynman rules for the genus expansion, which involve vertices, propagators and tadpoles. The vertices are universal, the propagators and the tadpoles depend on the Riemann surface. As a demonstration we evaluate the genus-two free energy using the Feynman rules.

2010-10-01

26

Venom yields from Australian and some other species of snakes.  

Science.gov (United States)

The wet and dry venom yields for most Australian native dangerous snakes and a number of non-Australian species are presented. Snakes from the Pseudonaja genus yielded higher than previously published amounts and suggest reconsideration be given to increasing the volume of antivenom in each vial. Higher percentage solids were obtained from venoms from the 4 cobra species (Naja) and Pseudechis genus included in this series. PMID:16937075

2006-08-26

27

Patterns of lineage diversification in the genus Naso (Acanthuridae).  

Science.gov (United States)

The evolutionary history of the reef fish genus Naso (F. Acanthuridae) was examined using a complete species-level molecular phylogeny of all recognized (19) species based on three loci (one nuclear ETS2 and two mitochondrial 16S, cyt b). This study demonstrates that distinct foraging modes and specialized body shapes arose independently at different times in the evolutionary history of the genus. Members of the subgenus Axinurus, characterized by a scombriform morphology, caudal fin structure and pelagic foraging mode, were consistently placed basal to the remaining Naso species, suggesting that pelagic foraging is plesiomorphic and benthic foraging derived in this genus. We used a genus-level phylogeny (nuclear marker, ETS2), which included several taxa from all other acanthurid genera, to obtain a range of age estimates for the most recent common ancestor of the genus Naso. These ...

2004-07-01

28

Tight contact structures and genus one fibered knots  

CERN Document Server

We study contact structures compatible with genus one open book decompositions with one boundary component. Any monodromy for such an open book can be written as a product of Dehn twists around dual non-separating curves in the once-punctured torus. Given such a product, we supply an algorithm to determine whether the corresponding contact structure is tight or overtwisted when the monodromy is pseudo-Anosov. We rely on Ozsv{\\'a}th-Szab{\\'o} Heegaard Floer homology in our construction and, in particular, we completely identify the $L$-spaces with genus one, one boundary component, pseudo-Anosov open book decompositions. Lastly, we reveal a new infinite family of hyperbolic three-manifolds with no co-orientable taut foliations, extending the family discovered in \\cite{RSS}.

2006-01-01

29

Species in the genus Turritopsis (Cnidaria, Hydrozoa): a molecular evaluation:  

British Library Electronic Table of Contents (United Kingdom)

Abstract Mitochondrial ribosomal gene sequences were used to investigate the status of several populations of hydromedusae belonging to the genus Turritopsis (family Oceaniidae). Several nominal species have been described for this genus, but most of them had been synonymized and attributed to one cosmopolitan species, Turritopsis nutricula. A recent revision based on morphological and reproductive characters, however, has shown that many different populations can be distinguished and that several of the nominal Turritopsis species are likely valid biological species. Our investigation using molecular sequence data of 16S mitochondrial gene confirms these results. The Mediterranean Turritopsis must be attributed to Turritopsis dohrnii and the Turritopsis of New Zealand must be referred to ...

2007-01-01

30

Mirror symmetry for two-parameter models. Pt. 2  

Energy Technology Data Exchange (ETDEWEB)

We describe in detail the space of the two Kaehler parameters of the Calabi-Yau manifold P[sub 4][sup (1,1,1,6,9)][D. R. Morrison, 1993] by exploiting mirror symmetry. The large complex structure limit of the mirror, which corresponds to the classical large radius limit, is found by studying the monodromy of the periods about the discriminant locus, the boundary of the moduli space corresponding to singular Calabi-Yau manifolds. A symplectic basis of periods is found and the action of the Sp(6, Z) generators of the modular group is determined. From the mirror map we compute the instanton expansion of the Yukawa couplings and the generalized N=2 index, arriving at the numbers of instantons of genus zero and genus one of each bidegree. We find that these numbers can be negative, even in genus zero. We also investigate an SL(2, Z) symmetry that acts on a boundary of the moduli space. ((orig.))

1994-11-07

31

Mirror symmetry for two-parameter models. Pt. 2  

International Nuclear Information System (INIS)

We describe in detail the space of the two Kaehler parameters of the Calabi-Yau manifold P_4"("1","1","1","6","9")[D. R. Morrison, 1993] by exploiting mirror symmetry. The large complex structure limit of the mirror, which corresponds to the classical large radius limit, is found by studying the monodromy of the periods about the discriminant locus, the boundary of the moduli space corresponding to singular Calabi-Yau manifolds. A symplectic basis of periods is found and the action of the Sp(6, Z) generators of the modular group is determined. From the mirror map we compute the instanton expansion of the Yukawa couplings and the generalized N=2 index, arriving at the numbers of instantons of genus zero and genus one of each bidegree. We find that these numbers can be negative, even in genus zero. We also investigate an SL(2, Z) symmetry that acts on a boundary of the moduli space. ((orig.)).

32

Description of two new species and a new genus of bopyrid isopod parasites (Bopyridae: Pseudioninae) of hermit crabs from China  

British Library Electronic Table of Contents (United Kingdom)

This is the first record from China of the bopyrid isopod genus Asymmetrione, of which the new species Asymmetrione globifera, a parasite of the hermit crab Dardanus hessii (Miers) in Beibu Gulf and South China Sea, is described. The female A. globifera differs from Asymmetrione nossibensis Bourdon in the shape of its barbula and ornamentation of the first oostegite. A tabulation of the occurrence of all currently known species of Asymmetrione is included. New genus Parasymmetrione is described. The type species, Parasymmetrione tuberculineata, sp. nov., a parasite of Clibanarius corallinus (H. Milne-Edwards) Xisha, is similar in appearance to Asymmetrione spp. but differs, in the female, in not having the propodi of its pereopods produced into sockets and having uniramous uropoda; the mal...

2010-01-01

33

Allelopathic interactions between Prorocentrum micans and Skeletonema costatum or Karenia mikimotoi in laboratory cultures  

British Library Electronic Table of Contents (United Kingdom)

Algal allelopathy is an ecological/physiological phenomenon that has focused attention on the interactions among algae and the production of algal toxins. We investigated the allelopathic interactions between the dinoflagellate genus Prorocentrum micans and diatom genus Skeletonema costatum and between P. micans and dinoflagellate genus Karenia mikimotoi using bi-algal cultures. Because the effects were species-specific and size-dependent, we evaluated the effect of different initial densities. At low densities of P. micans and high densities of S. costatum inoculated into the same medium, the growth of P. micans was weakly restrained, whereas the growth of S. costatum was significantly suppressed. S. costatum and K. mikimotoi were strongly inhibited by P. micans, in both the bi-algal cult...

2011-01-01

34

The Exceptionally Large Genome of Hendra Virus: Support for Creation of a New Genus within the Family Paramyxoviridae  

UK PubMed Central (United Kingdom)

An outbreak of acute respiratory disease in Hendra, a suburb of Brisbane, Australia, in September 1994 resulted in the deaths of 14 racing horses and a horse trainer. The causative agent was a new member...Full Text Available

2000-11-01

35

Role of narK2X and narGHJI in Hypoxic Upregulation of Nitrate Reduction by Mycobacterium tuberculosis  

UK PubMed Central (United Kingdom)

Mycobacterium tuberculosis is one of the strongest reducers of nitrate in the genus Mycobacterium. Under microaerobic conditions, whole cells exhibit upregulation of...Full Text Available

2003-12-01

36

Pharmacology and toxicology of pahayokolide A, a bioactive metabolite from a freshwater species of Lyngbya isolated from the Florida Everglades  

UK PubMed Central (United Kingdom)

The genus of filamentous cyanobacteria, Lyngbya, has been found to be a rich source of bioactive metabolites. However, identification of such compounds from Lyngbya...Full Text Available

2004-12-01

37

Parallel Loss of Plastid Introns and Their Maturase in the Genus Cuscuta  

UK PubMed Central (United Kingdom)

Plastid genome content and arrangement are highly conserved across most land plants and their closest relatives, streptophyte algae, with nearly all plastid introns having invaded the genome in their...Full Text Available

39

New Species of the Late Cenozoic Fungal form-Genus Mediaverrunites Jarzen & Elsik 1986 Ex Nandi & Sinha 2007  

Science.gov (United States)

... Wrenn. References CitedBanerjee, S., and Nandi, B. 1992 Fossil fungi from Miocene sediments of Mizoram and their environmental ... ...

40

Natural History of the Lutz's Frog Cycloramphus lutzorum Heyer, 1983 (Anura: Cycloramphidae) in the Brazilian Atlantic ...  

Science.gov (United States)

... recognized in the genus in which one inhabits forest litter and the other inhabits streams (Verdade, 2005). The forest litter species deposit their eggs in humid habitats, with ... ...

 
 
 
 
41

Global depression in gene expression as a response to rapid thermal changes in vent mussels  

UK PubMed Central (United Kingdom)

Hydrothermal vent mussels belonging to the genus Bathymodiolus are distributed worldwide and dominate communities at shallow Atlantic hydrothermal sites. While organisms inhabiting...Full Text Available

2009-09-07

42

Gardnerella vaginalis: characteristics, clinical considerations, and controversies.  

UK PubMed Central (United Kingdom)

The clinical significance, Gram stain reaction, and genus affiliation of Gardnerella vaginalis have been controversial since Gardner and Dukes described the organism as the cause of "nonspecific vaginitis,"...Full Text Available

1992-07-01

43

Evolution of feeding specialization in Tanganyikan scale-eating cichlids: a molecular phylogenetic approach  

UK PubMed Central (United Kingdom)

BackgroundCichlid fishes in Lake Tanganyika exhibit remarkable diversity in their feeding habits. Among them, seven species in the genus Perissodus are known for...Full Text Available

44

Complete plastid genome sequences suggest strong selection for retention of photosynthetic genes in the parasitic plant genus Cuscuta  

UK PubMed Central (United Kingdom)

BackgroundPlastid genome content and protein sequence are highly conserved across land plants and their closest algal relatives. Parasitic plants, which obtain some or all of their...Full Text Available

45

Characterization of ?-Butyrolactone Autoregulatory Signaling Gene Homologs in the Angucyclinone Polyketide WS5995B Producer Streptomyces acidiscabies?  

UK PubMed Central (United Kingdom)

Organisms belonging to the genus Streptomyces produce numerous important secondary metabolites and undergo a sophisticated morphological differentiation program. In many instances these...Full Text Available

2009-08-01

46

The Geometry of Stable Quotients in Genus One  

CERN Document Server

Stable quotient spaces provide an alternative to stable maps for compactifying spaces of maps. When the target is projective space and the domain curve has genus 1, these are smooth proper Deligne-Mumford stacks. In this paper we study the associated coarse moduli schemes. We show these schemes are projective, rationally connected and have Picard number 2. Then we give generators for the Picard group, compute the canonical divisor, and the cones of ample and effective divisors. In certain cases, we also give a closed formula for the Poincar\\'{e} polynomial.

2011-01-01

47

Dentascan CT of mandibular incisive canal. Radiological anatomy and therapeutic implications  

International Nuclear Information System (INIS)

The main purpose of this paper is to stress the importance of CT depiction of the mandibular incisive canal. This anatomical structure contains a major neurovascular bundle and is thus very important in the planning of mandibular implants in the canine-incisive area. The importance of careful assessment of the mandibular canal course before implantology is now widely recognized. The same holds true for the canine-incisive region in the jaw, to detect the incisive canal if present and prevent any complications from its accidental damage. CT with a dedicated software showed the incisive canal in a large number of patients, which calls for precise reporting of its presence, course, and relationships with teeth.

1999-11-01

48

Modelling the reworking effects of bioturbation on the incorporation of radionuclides into the sediment column: implications for the fate of particle-reactive radionuclides in Irish Sea sediments  

British Library Electronic Table of Contents (United Kingdom)

A microcosm laboratory experiment was conducted to determine the impact of biological reworking by the ragworm Nereis diversicolor on the redistribution of particle-bound radionuclides deposited at the sediment-water interface. Over the course of the 40-day experiment, as much as 35% of a 137Cs-labelled particulate tracer deposited on the sediment surface was redistributed to depths of up to 11 cm by the polychaete. Three different reworking models were employed to model the profiles and quantify the biodiffusion and biotransport coefficients: a gallery-diffuser model, a continuous sub-surface egestion model and a biodiffusion model. Although the biodiffusion coefficients obtained for each model were quite similar, the continuous sub-surface egestion model provided the best fit to the data...

2010-01-01

49

Meiofauna in sandy back-reef platforms differently exposed to the monsoons in the Maldives (Indian Ocean)  

British Library Electronic Table of Contents (United Kingdom)

Maldives comprise some of the most characteristic and significant atoll systems, but the meiobenthic assemblages of these islands are still largely unknown. A study on meiofauna was conducted on three Maldivian sandy back-reef platforms differently exposed to stronger westerly monsoons. Clear high energy effects of the waves causing currents and erosions were observed at the completely exposed and isolated offshore reef of Thoddoo Island. Wave energy of medium intensity was confirmed at Rasdhoo by depositional structures (finolhu), while a medium to low energy level was recorded at Gulhi on the basis of the presence of a low sandy bar. The meiofaunal assemblage counted 17 major taxa. Copepods and nematodes were dominant, followed by platyhelminthes and polychaetes. The nematode assemblage ...

2011-01-01

50

Influence of anthropogenic stress on fitness and behaviour of a key-species of estuarine ecosystems, the ragworm Nereis diversicolor  

British Library Electronic Table of Contents (United Kingdom)

Fitness, (biometric measurements, reproduction) and behaviour that are ecologically relevant biomarkers in assessing the quality of estuarine sediments were studied by comparing the responses of the polychaete worm Nereis diversicolor - a key species in estuaries - along a pollution gradient. Intersite differences were shown for all the measured parameters: size-weight relationships, energy reserves as glycogen and lipids, sexual maturation patterns, total number of oocytes per female, total and relative fecundity, burrowing behaviour. The physiological and behavioural status of N. diversicolor was consistently disturbed in the larger, most contaminated estuaries (Loire and Seine, Fr.) compared to reference sites (Bay of Bourgneuf, Goyen estuary, Fr.). Many classes of potentially toxic che...

2010-01-01

51

Expression of Distal-less, dachshund, and optomotor blind in Neanthes arenaceodentata (Annelida, Nereididae) does not support homology of appendage-forming mechanisms across the Bilateria  

British Library Electronic Table of Contents (United Kingdom)

The similarity in the genetic regulation of arthropod and vertebrate appendage formation has been interpreted as the product of a plesiomorphic gene network that was primitively involved in bilaterian appendage development and co-opted to build appendages (in modern phyla) that are not historically related as structures. Data from lophotrochozoans are needed to clarify the pervasiveness of plesiomorphic appendage-forming mechanisms. We assayed the expression of three arthropod and vertebrate limb gene orthologs, Distal-less (Dll), dachshund (dac), and optomotor blind (omb), in direct-developing juveniles of the polychaete Neanthes arenaceodentata. Parapodial Dll expression marks pre-morphogenetic notopodia and neuropodia, becoming restricted to the bases of notopodial cirri and to ventral ...

2010-01-01

52

Biodynamic modelling of the accumulation of Ag, Cd and Zn by the deposit-feeding polychaete Nereis diversicolor: Inter-population variability and a generalised predictive model  

British Library Electronic Table of Contents (United Kingdom)

Biodynamic parameters of the ragworm Nereis diversicolor from southern Spain and south England were experimentally derived to assess the inter-population variability of physiological parameters of the bioaccumulation of Ag, Cd and Zn from water and sediment. Although there were some limited variations, these were not consistent with the local metal bioavailability nor with temperature changes. Incorporating the biodynamic parameters into a defined biodynamic model, confirmed that sediment is the predominant source of Cd and Zn accumulated by the worms, accounting in each case for 99% of the overall accumulated metals, whereas the contribution of dissolved Ag to the total accumulated by the worm increased from about 27 to about 53% with increasing dissolved Ag concentration. Standardised va...

2010-01-01

53

Complete genome sequence of Conexibacter woesei type strain (ID131577T)  

Energy Technology Data Exchange (ETDEWEB)

The genus Conexibacter (Monciardini et al. 2003) represents the type genus of the family Conexibacteraceae (Stackebrandt 2005, emend. Zhi et al. 2009) with Conexibacter woesei as the type species of the genus. C. woesei is a representative of a deep evolutionary line of des-cent within the class Actinobacteria. Strain ID131577T was originally isolated from temperate forest soil in Gerenzano (Italy). Cells are small, short rods that are motile by peritrichous fla-gella. They may form aggregates after a longer period of growth and, then as a typical charac-teristic, an undulate structure is formed by self-aggregation of flagella with entangled bacteri-al cells. Here we describe the features of the organism, together with the complete sequence and annotation. The 6,359,369 bp long genome of C. woesei contains 5,950 protein-coding and 48 RNA genes and is part of the Genomic Encyclopedia of Bacteria and Archaea project.

2010-01-01

54

Molecular phylogenetic relationships and phenotypic diversity in miniaturized toadlets, genus Brachycephalus (Amphibia: Anura: Brachycephalidae)  

British Library Electronic Table of Contents (United Kingdom)

Toadlets of the genus Brachycephalus are endemic to the Atlantic rainforests of southeastern and southern Brazil. The 14 species currently described have snout-vent lengths less than 18mm and are thought to have evolved through miniaturization: an evolutionary process leading to an extremely small adult body size. Here, we present the first comprehensive phylogenetic analysis for Brachycephalus, using a multilocus approach based on two nuclear (Rag-1 and Tyr) and three mitochondrial (Cyt b, 12S, and 16S rRNA) gene regions. Phylogenetic relationships were inferred using a partitioned Bayesian analysis of concatenated sequences and the hierarchical Bayesian method (BEST) that estimates species trees based on the multispecies coalescent model. Individual gene trees showed conflict and also va...

2011-01-01

55

The Prevention of Periodontal Bone Loss at the Osteotomy Site After Anterior Segmental and Dento-Osseous Osteotomy  

British Library Electronic Table of Contents (United Kingdom)

Purpose Degeneration of the gingival margin and periodontal bone loss between segments can occur in various segmental osteotomies. However, treatment and management of these problems have not yet been resolved; improvement of the conventional method is necessary. The purpose of this retrospective study is to evaluate the usefulness and advantage of orthodontic devices in osteotomies. Patients and Methods Forty Japanese adults presented with jaw deformities diagnosed as mandibular prognathism with maxillary protrusion, bimaxillary protrusion, and anterior crowding. Of these 40 patients, 20 (group 1) underwent anterior segmental osteotomy or dento-osseous osteotomy along with our original orthodontic periodontal management. The remaining 20 (group 2) patients underwent conventional procedure...

2006-01-01

56

Orthognathic treatment with maxillary and mandibular anterior segmental osteotomy  

British Library Electronic Table of Contents (United Kingdom)

This case report presents a case that underwent orthognathic treatment with anterior segmental osteotomies on both jaws. The patient was a 26-year-old female with maxillary protrusion, lip incompetence with an everted vermilion border. The overbite was +1.0mm, overjet +1.0mm. The pre-surgical orthodontic treatment included the extraction of the four first premolars and a multi-bracket treatment was started. After 12 months of pre-surgical orthodontic treatment, both the anterior maxillary and the anterior mandibular segments were retracted surgically by 5.5mm. The total treatment period was 18 months. An anterior segmental osteotomy can induce the remarkable structural changes for bimaxillary lip protrusion patients.

2009-01-01

57

Light weight underground pipe or cable installing device  

Energy Technology Data Exchange (ETDEWEB)

This invention pertains to a light weight underground pipe or cable installing device adapted for use in a narrow and deep operating trench. More particularly this underground pipe installing device employs a pair of laterally movable gates positioned adjacent the bottom of the operating trench where the earth is more solid to securely clamp the device in the operating trench to enable it to withstand the forces exerted as the actuating rod is forced through the earth from the so-called operating trench to the target trench. To accommodate the laterally movable gates positioned adjacent the bottom of the narrow pipe installing device, a pair of top operated double-acting rod clamping jaws, operated by a hydraulic cylinder positioned above the actuating rod are employed.

1985-01-08

58

Environmental quality assessment in estuarine ecosystems: Use of biometric measurements and fecundity of the ragworm Nereis diversicolor (Polychaeta, Nereididae)  

British Library Electronic Table of Contents (United Kingdom)

The ability to cope with environmental stress may be expensive in terms of energy and this cost of tolerance is suspected to have negative counterparts such as reduced growth and fecundity. To date, condition indices based on biometric measurements are currently used in bivalves or fish but do not exist in endobenthic worms, despite their interest as bioindicators for the sedimentary compartment in which the major part of pollutants is stored in aquatic environments. In the present work, several biometric variables (jaw and total body length, number of segments, the length of the first three segments L3, wet or dry weight) were measured in the ragworm Nereis diversicolor originating from clean (Authie) and polluted (Seine) estuaries (France) to study size-weight relationships. The producti...

2008-01-01

59

Detection of the first gross CDC73 germline deletion in an HPT-JT syndrome family  

British Library Electronic Table of Contents (United Kingdom)

Abstract Hereditary primary hyperparathyroidism (HPT) may develop as a solitary endocrinopathy (FIHP) or as part of multiple endocrine neoplasia Type 1, multiple endocrine neoplasia Type 2A, or hereditary HPT-jaw tumor syndrome. Inactivating germline mutations of the tumor suppressor gene CDC73 account for 14 and 50% of all FIHP and HPT-JT patients, respectively, and have also been found in almost 20% of apparently sporadic parathyroid carcinoma patients. Although more than 60 independent germline mutations have been described, to date no rearrangement affecting the CDC73 locus has been identified. By means of multiplex-PCR we found a large germline deletion affecting the whole gene in a two-generation HPT-JT family. Subsequently array-CGH and specific PCR analysis determined that the muta...

2011-01-01

60

Monoclonal antibodies define genus-specific, species-specific, and cross-reactive epitopes of the chlamydial 60-kilodalton heat shock protein (hsp60): specific immunodetection and purification of chlamydial hsp60.  

UK PubMed Central (United Kingdom)

Ocular and urogenital tract infections with Chlamydia trachomatis can progress to chronic inflammatory diseases that produce blindness and tubal infertility. The pathophysiology of these chronic disease...Full Text Available

1992-06-01

 
 
 
 
61

Genus 4 trigonal reduction of the Benney equations  

International Nuclear Information System (INIS)

It was shown by Gibbons and Tsarev (1996 Phys. Lett. A 211 19, 1999 Phys. Lett. A 258 263) that N-parameter reductions of the Benney equations correspond to particular N-parameter families of conformal maps. In recent papers (Baldwin and Gibbons 2003 J. Phys. A: Math. Gen. 36 8393-417, Baldwin and Gibbons 2004 J. Phys. A: Math. Gen. 37 5341-54), the present authors have constructed examples of such reductions where the mappings take the upper half p-plane to a polygonal slit domain in the #lambda#-plane. In those cases, the mapping function was expressed in terms of the derivatives of Kleinian #sigma# functions of hyperelliptic curves, restricted to the one-dimensional stratum #THETA#_1 of the #THETA#-divisor. This was done using an extension of the method given in Enolskii et al (2003 J. Nonlinear Sci. 13 157) extended to a genus 3 curve (Enolski V Z and Gibbons J Addition theorems on the strata of the theta divisor of genus three ...

2006-04-07

62

Influence of anthropogenic stress on fitness and behaviour of a key-species of estuarine ecosystems, the ragworm Nereis diversicolor  

Energy Technology Data Exchange (ETDEWEB)

Fitness, (biometric measurements, reproduction) and behaviour that are ecologically relevant biomarkers in assessing the quality of estuarine sediments were studied by comparing the responses of the polychaete worm Nereis diversicolor - a key species in estuaries - along a pollution gradient. Intersite differences were shown for all the measured parameters: size-weight relationships, energy reserves as glycogen and lipids, sexual maturation patterns, total number of oocytes per female, total and relative fecundity, burrowing behaviour. The physiological and behavioural status of N. diversicolor was consistently disturbed in the larger, most contaminated estuaries (Loire and Seine, Fr.) compared to reference sites (Bay of Bourgneuf, Goyen estuary, Fr.). Many classes of potentially toxic chemicals present in these estuaries most likely contribute to these impairments but food availability may act as a confounding factor, interfering with the potential impact of ...

2010-01-15

63

Modelling the reworking effects of bioturbation on the incorporation of radionuclides into the sediment column: implications for the fate of particle-reactive radionuclides in Irish Sea sediments  

Energy Technology Data Exchange (ETDEWEB)

A microcosm laboratory experiment was conducted to determine the impact of biological reworking by the ragworm Nereis diversicolor on the redistribution of particle-bound radionuclides deposited at the sediment-water interface. Over the course of the 40-day experiment, as much as 35% of a {sup 137}Cs-labelled particulate tracer deposited on the sediment surface was redistributed to depths of up to 11 cm by the polychaete. Three different reworking models were employed to model the profiles and quantify the biodiffusion and biotransport coefficients: a gallery-diffuser model, a continuous sub-surface egestion model and a biodiffusion model. Although the biodiffusion coefficients obtained for each model were quite similar, the continuous sub-surface egestion model provided the best fit to the data. The average biodiffusion coefficient, at 1.8 {+-} 0.9 cm{sup 2} y{sup -1}, is in good agreement with the values quoted by other workers on the bioturbation effects of this ...

2010-11-15

64

Modelling the reworking effects of bioturbation on the incorporation of radionuclides into the sediment column: implications for the fate of particle-reactive radionuclides in Irish Sea sediments  

International Nuclear Information System (INIS)

A microcosm laboratory experiment was conducted to determine the impact of biological reworking by the ragworm Nereis diversicolor on the redistribution of particle-bound radionuclides deposited at the sediment-water interface. Over the course of the 40-day experiment, as much as 35% of a "1"3"7Cs-labelled particulate tracer deposited on the sediment surface was redistributed to depths of up to 11 cm by the polychaete. Three different reworking models were employed to model the profiles and quantify the biodiffusion and biotransport coefficients: a gallery-diffuser model, a continuous sub-surface egestion model and a biodiffusion model. Although the biodiffusion coefficients obtained for each model were quite similar, the continuous sub-surface egestion model provided the best fit to the data. The average biodiffusion coefficient, at 1.8 #+-# 0.9 cm"2 y"-"1, is in good agreement with the values quoted by other workers on the bioturbation effects of this ...

2010-11-01

65

Vector bundles, dualities, and classical geometry on a curve of genus two  

CERN Document Server

Let $C$ be a curve of genus two. We denote by $SU_C(3)$ the moduli space of semi-stable vector bundles of rank 3 and trivial determinant over $C$, and by $J^d$ the variety of line bundles of degree $d$ on $C$. In particular, $J^1$ has a canonical theta divisor $\\Theta$. The space $SU_C(3)$ is a double cover of $P^8=|3\\Theta|$ branched along a sextic hypersurface, the Coble sextic. In the dual $\\check{P}^8=|3\\Theta|^*$, where $J^1$ is embedded, there is a unique cubic hypersurface singular along $J^1$, the Coble cubic. We prove that these two hypersurfaces are dual, inducing a non-abelian Torelli result. Moreover, by looking at some special linear sections of these hypersurfaces, we can observe and reinterpret some classical results of algebraic geometry in a context of vector bundles: the duality of the Segre-Igusa quartic with the Segre cubic, the symmetric configuration of 15 lines and 15 points, the Weddle quartic surface and the Kummer surface.

2007-01-01

66

Morphological and molecular redescription of the myxozoan Unicapsula pflugfelderi from two teleost hosts in the Mediterranean. A review of the genus Unicapsula Davis 1924  

British Library Electronic Table of Contents (United Kingdom)

Abstract Elongate plasmodia with myxosporean spores belonging to the genus Unicapsula, Davis, 1924 were found in the skeletal muscle of the striped seabream, Lithognathus mormyrus (L.), a candidate for the mediterranean aquaculture. The only species of Unicapsula described from the Mediterranean is Unicapsula pflugfelderi Schubert et al. 1975, which occurs in the picarel, Spicara smaris (L.). For morphological and molecular comparison of U. pflugfelderi from S. smaris with Unicapsula sp. from L. mormyrus measurements of plasmodia and spores, ultrastructural details and 18S and 28S rDNA sequences were analysed. Whereas plasmodia were 2-3 times larger in S. smaris than in L. mormyrus (length 2.47-0.81 mm; width 0.22-0.09 mm; P = 0.000), spore morphology showed minor differences and both 18S ...

2009-01-01

67

Land planarians (Platyhelminthes: Tricladida: Geoplanidae) from the Iberian Peninsula: new records and description of two new species, with a discussion on ecology  

British Library Electronic Table of Contents (United Kingdom)

Two new species of the genus Microplana are described from the Iberian Peninsula. The new taxa are compared with congeneric species. Distributional records for two other European species, Microplana monacensis (Heinzel, 1929) and Microplana groga Jones et al. 2008, are presented and the presence of Microplana terrestris (Muller, 1774) is confirmed on the Iberian Peninsula. A partial re-description of Microplana nana Mateos, Giribet and Carranza, 1998 is provided. The finding of a new and probably introduced, but unidentified, species of land planarian is reported. Land planarians were generally found in the vicinity of deciduous trees and rivers.

2011-01-01

68

Clinical aspects of Marburg hemorrhagic fever  

British Library Electronic Table of Contents (United Kingdom)

Marburg virus belongs to the genus Marburgvirus in the family Filoviridae and causes a severe hemorrhagic fever, known as Marburg hemorrhagic fever (MHF), in both humans and nonhuman primates. Similar to the more widely known Ebola hemorrhagic fever, MHF is characterized by systemic viral replication, immunosuppression and abnormal inflammatory responses. These pathological features of the disease contribute to a number of systemic dysfunctions including hemorrhages, edema, coagulation abnormalities and, ultimately, multiorgan failure and shock, often resulting in death. A detailed understanding of the pathological processes that lead to this devastating disease remains elusive, a fact that contributes to the lack of licensed vaccines or effective therapeutics. This article will review the...

2011-01-01

69

Capping off open books and the Ozsvath-Szabo contact invariant  

CERN Document Server

If (S,h) is an open book with disconnected binding then we can form a new open book (S',h') by capping off one of the boundary components of S with a disk. We define a U-equivariant map on Heegaard Floer homology which sends c^+(S',h') to c^+(S,h), and we discuss various applications. In particular, we compute the 3-dimensional invariant associated to any contact structure with non-vanishing contact invariant which is compatible with a genus one open book with periodic monodromy.

2009-01-01

70

The effect of the primary collimator and flattening filter on asymmetric fields for a Siemens PRIMUS linear accelerator  

CERN Document Server

Homogeneity for highly asymmetric fields has been studied for a Siemens PRIMUS linear accelerator. The flattening filter has a radius smaller than the primary collimator one, creating inhomogeneities that affect large fields in areas far from the collimator axis, and asymmetric fields with large offset. Profiles and absolute dose have been measured in fields with two jaws at maximal position (20 cm) and the other two at maximal overtravel (10 cm.), corresponding to 10 x 10 fields with extreme offset. Profiles have a remarkable gradient decreasing towards the beam edge, making these fields unsuitable for treatments. Results show that the design of the primary collimator and flattening filter assembly has direct consequences in homogeneity. This can have clinical consequences for treatments involving fields that include these inhomogeneous areas. Comparisons with the treatment planning system (Philips Pinnacle) calculations, that computes under the hypotheses of a ...

2005-01-01

71

Noise parameter forecasting and noise reduction design at working places in coal preparation plants  

Energy Technology Data Exchange (ETDEWEB)

Discusses the Methodological Directions for Expected Noise Calculation and Noise Reduction Design in Coal Preparation Plants developed at the Institute of Solid Fuel Preparation. Calculation of expected sound pressure levels is described. An exemplary chart of noise levels in the coal feed section of the coal preparation plant at the Taldinskii surface mine is presented. Procedures for planning noise pollution abatement measures and checking the expected noise levels are considered and explained on the example of the project of the coal crushing section in the Taldinskii plant (Kemerovugol' association) designed by Sibgiproshakht. A SMD-117 jaw crusher, 300 mm screen and a conveyor are to work in a space of 45,820 m{sup 3} with 30 m ceiling height. The expected noise level calculated for the working place of the crusher operator is 93-95 dBA without noise isolation and 85.5 dBA with noise isolation. A block diagram of a FORTRAN program for calculation of ...

1989-02-01

72

CT appearances of unilateral cleft palate 20 years after bone graft surgery  

Energy Technology Data Exchange (ETDEWEB)

Purpose: To describe CT appearances in patients with unilateral cleft lip and palate (CLP) 20 years after bone graft surgery. Material and Methods: Eighteen consecutive patients with unilateral CLP were examined. All patients had been treated with primary closure, both in infancy and early childhood, supplemented with bone grafting at the age of around 10 years. The CT examination of the upper jaw included a dental CT program. The CT appearances of the cleft side were compared with those of the untreated non-cleft side. Results: Abnormal CT appearances included skew nasal aperture (n=17), nasal septal deviation (n=17), low floor of nasal aperture (n=15) at or towards the cleft side, and deviation of anterior nasal spine towards the non-cleft side (n=18). The posterior part of the bone cleft was visible in all patients, and the dental arch was V-shaped in 8. Conclusion: Although adherence to the present treatment protocol is considered to give satisfactory ...

2002-11-01

73

CT appearances of unilateral cleft palate 20 years after bone graft surgery  

International Nuclear Information System (INIS)

Purpose: To describe CT appearances in patients with unilateral cleft lip and palate (CLP) 20 years after bone graft surgery. Material and Methods: Eighteen consecutive patients with unilateral CLP were examined. All patients had been treated with primary closure, both in infancy and early childhood, supplemented with bone grafting at the age of around 10 years. The CT examination of the upper jaw included a dental CT program. The CT appearances of the cleft side were compared with those of the untreated non-cleft side. Results: Abnormal CT appearances included skew nasal aperture (n=17), nasal septal deviation (n=17), low floor of nasal aperture (n=15) at or towards the cleft side, and deviation of anterior nasal spine towards the non-cleft side (n=18). The posterior part of the bone cleft was visible in all patients, and the dental arch was V-shaped in 8. Conclusion: Although adherence to the present treatment protocol is considered to give satisfactory ...

2002-11-01

74

A convolution/superposition method using primary and scatter dose kernels formed for energy bins of X-ray spectra reconstructed as a function of off-axis distance: comparison of calculated and measured 10-MV X-ray doses in thorax-like phantoms  

British Library Electronic Table of Contents (United Kingdom)

We performed experimental studies on the convolution/superposition method reported in the former companion paper (Iwasaki in Radiol Phys Technol 4, 2011) using 10-MV X-ray beams from open-jaw-collimated fields. The method uses primary and scatter dose kernels formed for energy bins of X-ray spectra reconstructed as a function of off-axis distance. We made a comparison of calculations and measurements in water phantoms and thorax-like phantoms with respect to percentage depth dose curves, tissue???phantom ratio curves, and dose profiles. We made the dose calculation by taking into account the beam-hardening effect with depth and the off-axis radiation-softening effect. We found that the method could be used, in general, for performing accurate dose calculations.

2011-01-01

75

A convolution/superposition method using primary and scatter dose kernels formed for energy bins of X-ray spectra reconstructed as a function of off-axis distance: a theoretical study on 10-MV X-ray dose calculations in thorax-like phantoms  

British Library Electronic Table of Contents (United Kingdom)

A convolution/superposition method is proposed for use with primary and scatter dose kernels formed for energy bins of X-ray spectra reconstructed as a function of off-axis distance. It should be noted that the number of energy bins is usually about ten, and that the reconstructed X-ray spectra can reasonably be applied to media with a wide range of effective Z numbers, ranging from water to lead. The study was carried out for 10-MV X-ray doses in water and thorax-like phantoms with the use of open-jaw-collimated fields. The dose calculations were made separately for primary, scatter, and electron contamination dose components, for which we used two extended radiation sources: one was on the X-ray target and the other on the flattening filter. To calculate the in-air beam intensities at po...

2011-01-01

76

Characterization of an add-on multileaf collimator for electron beam therapy  

Energy Technology Data Exchange (ETDEWEB)

An add-on multileaf collimator for electrons (eMLC) has been developed that provides computer-controlled beam collimation and isocentric dose delivery. The design parameters result from the design study by Gauer et al (2006 Phys. Med. Biol. 51 5987-6003) and were configured such that a compact and light-weight eMLC with motorized leaves can be industrially manufactured and stably mounted on a conventional linear accelerator. In the present study, the efficiency of an initial computer-controlled prototype was examined according to the design goals and the performance of energy- and intensity-modulated treatment techniques. This study concentrates on the attachment and gantry stability as well as the dosimetric characteristics of central-axis and off-axis dose, field size dependence, collimator scatter, field abutment, radiation leakage and the setting of the accelerator jaws. To provide isocentric irradiation, the eMLC can be placed either 16 or 28 cm above the ...

2008-02-21

77

Study of the inorganic constituents in different species of Casearia medicinal plant collected in distinct regions of the Atlantic Forest, SP State, Brazil; Estudo sobre os constituintes inorganicos presentes em diferentes especies da planta medicinal do genero Casearia coletadas em regioes distintas da Mata Atlantica, SP  

Energy Technology Data Exchange (ETDEWEB)

The use of medicinal plants in the treatment of diseases has increased significantly in the last years, as has research concerning chemical characterization of these plants. In this study, inorganic constituents were determined in leaves and in extracts from three medicinal plant species of the Casearia genus (C. sylvestris, C. decandra and C. obliqua) collected in distinct regions of the Atlantic Forest, SP. The elemental compositions of the soils in which these plants were grown were also determined. Traditionally, these plants are used due to their antiinflammatory, antiacid, antiseptic and cicatrizing properties. The antiulcer and the antitumor activities of the Casearia genus and its capacity to neutralize snake and bee venoms, have also been scientifically confirmed. The analytical methodology used was neutron activation analysis. Long and short irradiation periods of the samples and the standards were carried out at IPEN's ...

2006-07-01

78

Phylogeny of iguanian lizards inferred from 29 nuclear loci, and a comparison of concatenated and species-tree approaches for an ancient, rapid radiation.  

Science.gov (United States)

Iguanian lizards form a diverse clade whose members have been the focus of many comparative studies of ecology, behavior, and evolution. Despite the importance of phylogeny to such studies, interrelationships among many iguanian clades remain uncertain. Within the Old World clade Acrodonta, Agamidae is sometimes found to be paraphyletic with respect to Chamaeleonidae, and recent molecular studies have produced conflicting results for many major clades. Within the largely New World clade Pleurodonta, relationships among the 12 currently recognized major subclades (mostly ranked as families) have been largely unresolved or poorly supported in previous studies. To clarify iguanian evolutionary history, we first infer phylogenies using concatenated maximum-likelihood (ML) and Bayesian analyses of DNA sequence data from 29 nuclear protein-coding genes for 47 iguanian and 29 outgroup taxa. We then estimate a relaxed-clock Bayesian chronogram for iguanians using BEAST. All three methods ...

2011-07-20

79

Ecological evaluation of proposed dredged material from Richmond Harbor Deepening Project and the intensive study of the Turning Basin  

Energy Technology Data Exchange (ETDEWEB)

Richmond Harbor is on the eastern shoreline of central San Francisco Bay and its access channels and several of the shipping berths are no longer wide or deep enough to accommodate modem deeper-draft vessels. The Water Resources Development Act of 1986 (PL99-662) authorized the US Army Corps of Engineers (USACE), San Francisco District to deepen and widen the navigation channels in Richmond Harbor. Several options for disposal of the material from this dredging project are under consideration by USACE: disposal within San Francisco Bay, at open-ocean disposal sites, or at uplands disposal sites. Purpose of this study was to conduct comprehensive evaluations, including chemical, biological, and bioaccumulation testing of sediments in selected areas of Richmond Harbor. This information was required by the Environmental Protection Agency (EPA) and USACE. Battelle/Marine Sciences Laboratory collected 20 core samples, both 4-in. and 12-in., to a project depth of -40 ft mean lower low water ...

1995-06-01

80

[Conversion of acetic acid to methane by thermophiles  

Science.gov (United States)

The primary goal of this project is to obtain a better understanding of thermophilic microorganisms which convert acetic acid to CH[sub 4]. The previous funding period represents a departure from earlier research in this laboratory, which was more physiological and ecological. The present work is centered on the biochemistry of the thermophile Methanothrix sp. strain CALS-1. this organism presents a unique opportunity, with its purity and relatively rapid growth, to do comparative biochemical studies with the other major acetotrophic genus Methanosarcina. We previously found that Methanothrix is capable of using acetate at concentrations 100 fold lower than Methanosarcina. This finding suggests that there are significant differences in the pathways of methanogenesis from acetate in the two genera.

1993-01-01

 
 
 
 
81

Removal of natural humic acids by decolorizing actinomycetes isolated from different soils (Algeria) for application in water purification  

British Library Electronic Table of Contents (United Kingdom)

Humic acids are considered problematically in drinking water because it can react readily with chlorine to form carcinogen compounds and its biological removal is much recommended. The scanning electron microscopy morphologies and optical parameters observed for natural humic acids (NHAs) extracted from different soils at Mitidja plain (Algeria) made them different from the commercial ones. Three of the most active strains of 19 actinomycetes were isolated and selected from surface soils at this plain. These strains were identified based on cultural characteristics and chemotaxonomic analysis and classified in the genus Streptomyces. Growth of these strains was assured on a poor liquid medium containing NHAs as carbon and nitrogen sources and degradation occur only in the presence of gluco...

2010-01-01

82

Regulation and secretion of Xanthomonas virulence factors  

British Library Electronic Table of Contents (United Kingdom)

Abstract Plant pathogenic bacteria of the genus Xanthomonas cause a variety of diseases in economically important monocotyledonous and dicotyledonous crop plants worldwide. Successful infection and bacterial multiplication in the host tissue often depend on the virulence factors secreted including adhesins, polysaccharides, LPS and degradative enzymes. One of the key pathogenicity factors is the type III secretion system, which injects effector proteins into the host cell cytosol to manipulate plant cellular processes such as basal defense to the benefit of the pathogen. The coordinated expression of bacterial virulence factors is orchestrated by quorum-sensing pathways, multiple two-component systems and transcriptional regulators such as Clp, Zur, FhrR, HrpX and HpaR. Furthermore, virule...

2010-01-01

83

Preliminary crystallographic analysis of a possible transcription factor encoded by the mimivirus L544 gene  

British Library Electronic Table of Contents (United Kingdom)

Mimivirus is the prototype of a new family (the Mimiviridae) of nucleocytoplasmic large DNA viruses (NCLDVs), which already include the Poxviridae, Iridoviridae, Phycodnaviridae and Asfarviridae. Mimivirus specifically replicates in cells from the genus Acanthamoeba. Proteomic analysis of purified mimivirus particles revealed the presence of many subunits of the DNA-directed RNA polymerase II complex. A fully functional pre-transcriptional complex appears to be loaded in the virions, allowing mimivirus to initiate transcription within the host cytoplasm immediately upon infection independently of the host nuclear apparatus. To fully understand this process, a systematic study of mimivirus proteins that are predicted (by bioinformatics) or suspected (by proteomic analysis) to be involved in...

2011-01-01

84

NEW COLLECTION RECORDS AND HOST RANGE OF THE COTTONWOOD LEAFCURL MITE, TETRA LOBUUFERA (K!IFER) (ACARI: ERIOPHYIDAE), IN THE USA.  

Energy Technology Data Exchange (ETDEWEB)

Coyle, D.R., and J.W. Amrine, Jr. 2004. New collection records and host range of the cottonwood leafcurl mite, Tetra lobulifera (Keifer) (Acari: Eriophyidae), in the USA. Internat. J. Acarol. 30(1):3-8. The cottonwood leafcurl mite, Aculops lobuliferus Keifer, 1961, is renamed as Tetra lobulifera (Keifer). This eriophyid mite is capable of inflicting substantial damage on plantation- and native-grown cottonwoods (Populus spp.). We report new State and County collection records from the eastern and northwestern U.S.A. as well as new host records, including Populus grandidentata Michx. (big-tooth aspen), for this pest. This updates the established geographic range of T. lobulzjera, and demonstrates its ability to utilize other host plants in the genus Populus for development.

2004-01-01

85

Molecular evidence for variation in polyandry among praying mantids (Mantodea: Ciulfina)  

British Library Electronic Table of Contents (United Kingdom)

Abstract Estimating paternity patterns provides insights into the importance of competing evolutionary forces on mating systems. The number of sires contributing to a female's offspring is mostly influenced by her relative promiscuity. However, in a postcopulatory context, it will also be affected by sperm competition and cryptic female choice. Here, we describe the paternity patterns of two species of praying mantis from the genus Ciulfina, the agile praying mantid. This study is the first to describe patterns of paternity in the Mantodea. We found a variation in paternity in these two closely related species. Ciulfina rentzi exhibited single paternity, with a single male siring all offspring within a clutch. By contrast, Ciulfina klassi displayed multiple paternity, with the minimum numb...

2011-01-01

86

Iterated splitting and the Tunnel Classification Conjecture  

CERN Document Server

For a genus-1 1-bridge knot in the 3-sphere, that is, a (1,1)-knot, a middle tunnel is a tunnel that is not an upper or lower tunnel for some (1,1)-position. Most torus knots have a middle tunnel, and non-torus-knot examples were obtained by Goda, Hayashi, and Ishihara. In a previous paper, we generalized their construction and calculated the slope invariants for the resulting examples. We give an interated version of the construction that produces many more examples, and calculate their slope invariants. If one starts with the trivial knot, the iterated construction produces the 2-bridge knots, giving a new calculation of the slope invariants of their tunnels. Together with other information, the examples suggest a general classification conjecture for all tunnels of all tunnel number 1 knots.

2011-01-01

87

Decolorization of textile azo dyes by newly isolated halophilic and halotolerant bacteria  

British Library Electronic Table of Contents (United Kingdom)

Studies were carried out on the decolorization of textile azo dyes by newly isolated halophilic and halotolerant bacteria. Among the 27 strains of halophilic and halotolerant bacteria isolated from effluents of textile industries, three showed remarkable ability in decolorizing the widely utilized azo dyes. Phenotypic characterization and phylogenetic analysis based on 16S rDNA sequence comparisons indicate that these strains belonged to the genus Halomonas. The three strains were able to decolorize azo dyes in a wide range of NaCl concentration (up to 20%w/v), temperature (25-40degreeC), and pH (5-11) after 4 days of incubation in static culture. They could decolorize the mixture of dyes as well as pure dyes. These strains also readily grew in and decolorized the high concentrations of dy...

2007-01-01

88

Comparison of auditory sense organs in parasitoid Tachinidae (Diptera) hosted by Tettigoniidae (Orthoptera) and homologous structures in a non-hearing Phoridae (Diptera)  

British Library Electronic Table of Contents (United Kingdom)

The dipteran parasitoids Therobia leonidei and Homotrixa alleni (Tachinidae) use acoustic cues to locate their calling tettigoniid (Ensifera, Orthoptera) hosts. The sexually dimorphic tympanal organs of both fly species are located at the prosternum. For comparison a homologous chordotonal organ in the non-hearing fly Phormia regina, Meigen (Phoridae) is also described. The scolopidial sense organs of the ears have approximately 180 sensory cells in Th. leonidei and 250 cells in H. alleni. Interspecific analysis indicates that the cell number and arrangement might be genus specific in Tachinidae. The mononematic scolopidia, each with one sensory cell, are of different sizes and insert at the tympanal membrane. Large scolopidial units (diameter of sensory cells up to 50??m) extend longitudi...

2007-01-01

89

Chitinolytic enzyme production and genetic improvement of a new isolate belonging to Streptomyces anulatus  

British Library Electronic Table of Contents (United Kingdom)

Thirty bacterial isolates were obtained from different sources and sites at Jeddah, Saudi Arabia, on chitin agar medium; 9 of the 30 isolates were cultured in liquid medium containing chitin as sole carbon and nitrogen sources. Isolate SM21, which was isolated from shrimp shells, showed the best growth and chitinase production in liquid medium. According to its morphological, physiological and biochemical characteristics, SM21 belongs to the genus Streptomyces and was identified as Streptomyces anulatus SM21. Identification was confirmed using 16S rDNA analysis. The chitinase enzyme was precipitated with 80% NH4SO4 and purified using DEAE-cellulose ion exchange chromatography followed by Sephadex G-100 gel filtration. The molecular weight determined using sodium dodecyl sulfate polyacrylam...

2011-01-01

90

Chemical constituents and anti-inflammatory and antioxidant activities evaluation of the leaves extracts of Chomelia obtusa Cham. and Schltdl. (Rubiaceae)  

International Nuclear Information System (INIS)

The phytochemical investigation of Chomelia obtusa leaves led to the isolation of four triterpenes (3-O-#beta#-D-quinovopyranosyl-28-O-#beta#-D-glycopyranosyl quinovic acid, 3-O-#beta#-D-quinovopyranosyl-28-O-#beta#-D-glycopyranosyl cincholic acid, and a mixture of ursolic and oleanolic acids), two flavonoids (3-O-#beta#-D-glycopyranosyl quercetin, 3-O-[#alpha#-L-rhamnopyranosyl-(1#->#6)-#beta#-D-galactopyranoside] quercetin), besides bornesitol and a mixture of 3,5- and 4,5-O-dicaffeoyl quinic acids. The structures of the isolated compounds were assigned on the basis of spectroscopic data, including two-dimensional NMR methods. The anti-inflammatory and antioxidant activities of the crude methanolic extract and of its fractions were evaluated. This is the first report on the chemical and biological investigation of the Chomelia genus. (author)

91

Bioinformatic analysis of BBTV satellite DNA in Hainan  

British Library Electronic Table of Contents (United Kingdom)

Banana bunchy top virus (BBTV), family Nanaviridae, genus Babuvirus, is a single stranded DNA virus (ssDNA) that causes banana bunchy top disease (BBTD) in banana plants. It is the most common and most destructive of all viruses in these plants and is widespread throughout the Asia-Pacific region. In this study we isolated, cloned and sequenced a BBTV sample from Hainan Island, China. The results from sequencing and bioinformatics analysis indicate this isolate represents a satellite DNA component with 12 DNA sequences motifs. We also predicted the physical and chemical properties, structure, signal peptide, phosphorylation, secondary structure, tertiary structure and functional domains of its encoding protein, and compare them with the corresponding quantities in the replication initiatio...

2011-01-01

92

Balanced metrics and chow stability of projective bundles over Riemann surfaces  

CERN Document Server

In 1980, I. Morrison proved that slope stability of a vector bundle of rank $2$ over a compact Riemann surface implies Chow stability of the projectivization of the bundle with respect to certain polarizations. We generalized Morrison's result to higher rank vector bundles over compact algebraic manifolds of arbitrary dimension that admit constant scalar curvature metric and have discrete automorphism group. In this article, we give a simple proof for polarizations $\\mathcal{O}_{\\mathbb{P}E^*}(d)\\otimes \\pi^* L^k$, where $d$ is a positive integer, $k \\gg 0$ and the base manifold is a compact Riemann surface of genus $g \\geq 2$.

2010-01-01

93

Antibacterial iridoid glucosides from Eremostachys laciniata  

British Library Electronic Table of Contents (United Kingdom)

Eremostachys laciniata (L) Bunge (family: Lamiaceae alt. Labiatae; subfamily: Lamioideae) is one of the 15 endemic Iranian herbs of the genus Eremostachys. A decoction of the roots and flowers of E. laciniata has traditionally been taken orally for the treatment of allergies, headache and liver diseases. Three antibacterial iridoid glucosides, phloyoside I (1), phlomiol (2) and pulchelloside I (3) have been isolated from the rhizomes of this plant. The structures of these compounds were elucidated unequivocally by a series of 1D and 2D NMR analyses. The antibacterial activity and brine shrimp toxicity of these compounds were assessed using the resazurin microtitre assay and the brine shrimp lethality assay, respectively. All three iridoid glycosides 1-3 exhibited from low to moderate level...

2009-01-01

94

Energetics and kinetics of anaerobic aromatic and fatty acid degradation  

Science.gov (United States)

The kinetics of benzoate degradation by the anaerobic syntrophic bacterium, Syntrophus buswellii, was studied in coculture with Desulfovibrio strain G11. The threshold value for benzoate degradation was dependent on the acetate concentration with benzoate threshold values ranging from 2.4 [mu]M at 20 mM acetate to 30.0 [mu]M at 65 mM acetate. Increasing acetate concentrations also inhibited the rate of benzoate degradation with a apparent K[sub i] for acetate inhibition of 7.0 mM. Lower threshold values were obtained when nitrate rather than sulfate was the terminal electron acceptor. These data are consistent with a thermodynamic explanation for the threshold, and suggest that there is a minimum Gibbs free energy value required for the degradation of benzoate. An acetoacetyl-CoA thiolase has been isolated from Syntrophomonas wolfei; it is apparently a key enzyme controlling the synthesis of poly-B-hydroxyalkanoate from acetyl-CoA in this organism. Kinetic characterization of the ...

1992-11-16

95

Azooxanthellate? Most Hawaiian black corals contain Symbiodinium.  

Science.gov (United States)

The ecological success of shallow-water reef-building corals (Hexacorallia: Scleractinia) is framed by their intimate endosymbiosis with photosynthetic dinoflagellates in the genus Symbiodinium (zooxanthellae). In contrast, the closely related black corals (Hexacorallia: Anthipatharia) are described as azooxanthellate (lacking Symbiodinium), a trait thought to reflect their preference for low-light environments that do not support photosynthesis. We examined 14 antipatharian species collected between 10 and 396 m from Hawai'i and Johnston Atoll for the presence of Symbiodinium using molecular typing and histology. Symbiodinium internal transcribed spacer-2 (ITS-2) region sequences were retrieved from 43 per cent of the antipatharian samples and 71 per cent of the examined species, and across the entire depth range. The ITS-2 sequences were identical or very similar to those commonly found in shallow-water scleractinian corals throughout the Pacific. Histological ...

2010-10-20

96

Dentascan CT of mandibular incisive canal. Radiological anatomy and therapeutic implications; Tomografia computerizzata con Dentascan del canale incisivo mandibolare. Anatomia radiologica e implicazioni terapeutiche  

Energy Technology Data Exchange (ETDEWEB)

The main purpose of this paper is to stress the importance of CT depiction of the mandibular incisive canal. This anatomical structure contains a major neurovascular bundle and is thus very important in the planning of mandibular implants in the canine-incisive area. The importance of careful assessment of the mandibular canal course before implantology is now widely recognized. The same holds true for the canine-incisive region in the jaw, to detect the incisive canal if present and prevent any complications from its accidental damage. CT with a dedicated software showed the incisive canal in a large number of patients, which calls for precise reporting of its presence, course, and relationships with teeth. [Italian] Scopo di questo lavoro e' sottolineare l'importanza di rilevare e segnalare la visibilita' con Tomografia Computerizzata del canale incisivo mandibolare, struttura anatomica al cui interno decorre un fascio vasculo nervoso e ...

1999-11-01

97

Comparison of internal emitter radiobiology in animals and humans  

Energy Technology Data Exchange (ETDEWEB)

Investigations of radionuclide metabolism and effects in various mammalian species revealed important similarities between animals and humans and between some animal species. These include skeletal deposition of radium and radiostrontium in bone volume; deposition on bone surfaces of plutonium and other actinides; liver deposition of actinides; induction of skeletal or liver malignancies by these radionuclides; induction of tooth and jaw abnormalities; mammary cancer induction by radium in humans and in the beagle; depression of circulating cells in blood; and induction of bone fractures. There are also inter-species differences that may not have been noted if multiple species (including humans) had not been studied. Some of these are more rapid excretion of radium in humans compared with most other mammals; induction by radium of eye melanomas in animals but not humans; rapid loss of deposited plutonium from liver in many species of mice and rats but not in humans ...

1997-01-01

98

Things fall apart: topology change from winding tachyons  

Energy Technology Data Exchange (ETDEWEB)

We argue that closed string tachyons drive two spacetime topology changing transitions - loss of genus in a Riemann surface and separation of a Riemann surface into two components. The tachyons of interest are localized versions of Scherk-Schwarz winding string tachyons arising on Riemann surfaces in regions of moduli space where string-scale tubes develop. Spacetime and world-sheet renormalization group analyses provide strong evidence that the decay of these tachyons removes a portion of the spacetime, splitting the tube into two pieces. We address the fate of the gauge fields and charges lost in the process, generalize it to situations with weak flux backgrounds, and use this process to study the type 0 tachyon, providing further evidence that its decay drives the theory sub-critical. Finally, we discuss the time-dependent dynamics of this topology-changing transition and find that it can occur more efficiently than analogous transitions on extended ...

2005-10-15

99

Things Fall Apart: Topology Change From Winding Tachyons  

Energy Technology Data Exchange (ETDEWEB)

We argue that closed string tachyons drive two spacetime topology changing transitions--loss of genus in a Riemann surface and separation of a Riemann surface into two components. The tachyons of interest are localized versions of Scherk-Schwarz winding string tachyons arising on Riemann surfaces in regions of moduli space where string-scale tubes develop. Spacetime and world-sheet renormalization group analyses provide strong evidence that the decay of these tachyons removes a portion of the spacetime, splitting the tube into two pieces. We address the fate of the gauge fields and charges lost in the process, generalize it to situations with weak flux backgrounds, and use this process to study the type 0 tachyon, providing further evidence that its decay drives the theory sub-critical. Finally, we discuss the time-dependent dynamics of this topology-changing transition and find that it can occur more efficiently than analogous transitions on extended ...

2005-02-04

100

Syntrophic microorganisms in anaerobic environments. Zettai kenki kankyoka ni okeru biseibutsu no kyosei  

Energy Technology Data Exchange (ETDEWEB)

The most classic information on the syntrophic microorganisms in an anaerobic bacteria symbiotic system may be methanobacillus omelianskii. These bacteria were isolated as ones degrading alcohols such as ethanol into methane and were stably preserved for more than 20 years. But, it was clarified by later researches that this was a kind of symbiotic cocultivation system of the bacteria (S strain) which oxidizes ethanol into acetic acid, hydrogen, and carbon dioxide, and a kind of bacteria of the methanobacterium genus which produces or synthesizes methane from hydrogen and carbon dioxide. Such a symbiotic system of two kinds of anaerobic bacteria is the one of a kind of bacteria which produces hydrogen by oxidizing substances and of another kind of bacteria which consume hydrogen. Various kinds of symbiotic systems including those of animal-and-bacteria, and those of plant-and-bacteria exist in the nature. Symbiotic microorganism systems under very peculiar ...

1992-07-10

 
 
 
 
101

Response of Sphagna to the changing environment  

Energy Technology Data Exchange (ETDEWEB)

During last decade, considerable interest has been focused to assess the influence of human activities on ecosystems. The increasing trend in the atmospheric concentration of CO{sub 2} has been predicted to continue till the next century and the amount of nitrogen deposition in the northern hemisphere has increased markedly. Substantial interest has been focused on predicting how these changes will affect on plants. Most boreal mire ecosystems are dominated by mosses of the genus Sphagnum, the litter of which constitutes the main component in the peat deposits and is an important CO{sub 2} sink via peat formation. Since virtually nothing was known about the growth response of peat mosses to elevated concentrations of CO{sub 2} and alerting changes in species composition were detected in the sensitive ombrotrophic mire vegetation under increased N deposition in central Europe, this study was established. Laboratory experiments focused on measurements of the patterns ...

1996-12-31

102

Molecular phylogenetic analysis of tropical freshwater mussels (Mollusca: Bivalvia: Unionoida) resolves the position of Coelatura and supports a monophyletic Unionidae.  

Science.gov (United States)

In previous molecular phylogenetic analyses of the freshwater mussel family Unionidae (Bivalvia: Unionoida), the Afrotropical genus Coelatura had been recovered in various positions, generally indicating a paraphyletic Unionidae. However that result was typically poorly supported and in conflict with morphology-based analyses. We set out to test the phylogenetic position of Coelatura by sampling tropical lineages omitted from previous studies. Forty-one partial 28S nuclear rDNA and partial COI mtDNA sequences (1130 total aligned nucleotides) were analyzed separately and in combination under both maximum parsimony and likelihood, as well as Bayesian inference. There was significant phylogenetic incongruence between the character sets (partition homogeneity test, p<0.01), but a novel heuristic for comparing bootstrap values among character sets analyzed separately and in combination illustrated that the observed conflict was due to homoplasy rather than separate ...

2011-07-30

103

Honokiol and magnolol as multifunctional antioxidative molecules for dermatologic disorders.  

Science.gov (United States)

Chinese herbs have been and still are widely used as important remedies in Oriental medicine. Over the recent years, a variety of biologically active constituents have been isolated from these sources and confirmed to have multifunctional activity in experimental studies. Honokiol is a small-molecule polyphenol isolated from the genus Magnolia. It is accompanied by other related polyphenols, including magnolol, with which it shares certain biological properties. Recently, honokiol and magnolol have been found to have anti-oxidative, anti-inflammatory, anti-tumor, and anti-microbial properties in preclinical models, without appreciable toxicity. These findings have increased interest in bringing honokiol and magnolol to the clinic as novel therapeutic agents in dermatology. In this review, the findings concerning the major mechanisms of action of honokiol and magnolol are described. Knowledge of the multiple activities of honokiol and magnolol can assist with the ...

2010-09-16

104

Elimination of a new ampelovirus (GLRaV-Pr) and Grapevine rupestris stem pitting associated virus (GRSPaV) from two Vitis vinifera cultivars combining in vitro thermotherapy with shoot tip culture  

British Library Electronic Table of Contents (United Kingdom)

A new virus species designated as Grapevine leafroll associated virus-Pr (GLRaV-Pr), which is classified in a distinct phylogenetic group of the genus Ampelovirus (Closteroviridae), was recently characterized from Greek grapevine cultivars. Elimination studies of GLRaV-Pr were carried out in two grapevine cultivars, 'Mantilaria' and 'Prevezaniko', co-infected with Grapevine rupestris stem pitting associated virus (GRSPaV, Flexiviridae). Both viruses were detected by nested RT-PCR assays. Virus elimination was achieved by combining in vitro thermotherapy with meristem ( 0.2mm) or shoot tip culture ( 0.5cm). The survival and regeneration rate of meristems was very low. On the other hand, high survival rates were observed in the cultured shoot tips accompanied with high elimination rates for ...

2009-01-01

105

Electricity generation and microbial community changes in microbial fuel cells packed with different anodic materials.  

Science.gov (United States)

Four materials, carbon felt cube (CFC), granular graphite (GG), granular activated carbon (GAC) and granular semicoke (GS) were tested as packed anodic materials to seek a potentially practical material for microbial fuel cells (MFCs). The microbial community and its correlation with the electricity generation performance of MFCs were explored. The maximum power density was found in GAC, followed by CFC, GG and GS. In GAC and CFC packed MFCs, Geobacter was the dominating genus, while Azospira was the most populous group in GG. Results further indicated that GAC was the most favorable for Geobacter adherence and growth, and the maximum power densities had positive correlation with the total biomass and the relative abundance of Geobacter, but without apparent correlation with the microbial diversity. Due to the low content of Geobacter in GS, power generated in this system may be attributed to other microorganisms such as Synergistes, Bacteroidetes and ...

2011-09-20

106

Complete genome sequence of Actinosynnema mirum type strain (101T)  

Energy Technology Data Exchange (ETDEWEB)

Actinosynnema mirum Hasegawa et al. 1978 is the type species of the genus, and is of phylogenetic interest because of its central phylogenetic location in the Actino-synnemataceae, a rapidly growing family within the actinobacterial suborder Pseudo-nocardineae. A. mirum is characterized by its motile spores borne on synnemata and as a producer of nocardicin antibiotics. It is capable of growing aerobically and under a moderate CO2 atmosphere. The strain is a Gram-positive, aerial and substrate mycelium producing bacterium, originally isolated from a grass blade collected from the Raritan River, New Jersey. Here we describe the features of this organism, together with the complete genome sequence and annotation. This is the first complete genome sequence of a member of the family Actinosynnemataceae, and only the second sequence from the actinobacterial suborder Pseudonocardineae. The 8,248,144 bp long single replicon genome with its 7100 protein-coding and 77 RNA ...

2009-05-20

107

Character-theoretic Techniques for Near-central Enumerative Problems  

CERN Document Server

The centre of the symmetric group algebra $\\mathbb{C}[\\mathfrak{S}_n]$ has been used successfully for studying important problems in enumerative combinatorics. These include maps in orientable surfaces and ramified covers of the sphere by curves of genus $g$, for example. However, the combinatorics of some equally important $\\mathfrak{S}_n$-factorization problems forces $k$ elements in $\\{1,...,n\\}$ to be distinguished. Examples of such problems include the star factorization problem, for which $k=1,$ and the enumeration of 2-cell embeddings of dipoles with two distinguished edges \\cite{VisentinWieler:2007} associated with Berenstein-Maldacena-Nastase operators in Yang-Mills theory \\cite{ConstableFreedmanHeadrick:2002}, for which $k=2.$ Although distinguishing these elements obstructs the use of central methods, these problems may be encoded algebraically in the centralizer of $\\mathbb{C}[\\mathfrak{S}_n]$ with respect to the subgroup $\\mathfrak{S}_{n-k}.$ ...

2011-01-01

108

Infinite Dimensional Groups and Riemann Surface Field Theories  

International Nuclear Information System (INIS)

We show how to obtain positive energy representations of the group G of smooth maps from a union of circles to U(N) from geometric data associated with a Riemann surface having these circles as boundary. Using covering spaces we can reduce to the case where N=1. Then our main result shows that Mackey induction may be applied and yields representations of the connected component of the identity of G which have the form of a Fock representation of an infinite dimensional Heisenberg group tensored with a finite dimensional representation of a subgroup isomorphic to the first cohomology group of the surface obtained by capping the boundary circles with discs. We give geometric sufficient conditions for the correlation functions to be positive definite and derive explicit formulae for them and for the vacuum (or cyclic) vector. (This gives a geometric construction of correlation functions which had been obtained earlier using tau functions.) By choosing particular functions in G with ...

1996-01-01

109

Hybrid incompatibilities in the parasitic wasp genus Nasonia: negative effects of hemizygosity and the identification of transmission ratio distortion loci.  

Science.gov (United States)

The occurrence of hybrid incompatibilities forms an important stage during the evolution of reproductive isolation. In early stages of speciation, males and females often respond differently to hybridization. Haldane's rule states that the heterogametic sex suffers more from hybridization than the homogametic sex. Although haplodiploid reproduction (haploid males, diploid females) does not involve sex chromosomes, sex-specific incompatibilities are predicted to be prevalent in haplodiploid species. Here, we evaluate the effect of sex/ploidy level on hybrid incompatibilities and locate genomic regions that cause increased mortality rates in hybrid males of the haplodiploid wasps Nasonia vitripennis and Nasonia longicornis. Our data show that diploid F(1) hybrid females suffer less from hybridization than haploid F(2) hybrid males. The latter not only suffer from an increased mortality rate, but also from behavioural and spermatogenic sterility. Genetic mapping in recombinant F(2) male ...

2011-08-31

110

Caldicellulosiruptor obsidiansis sp. nov., an anaerobic, extremely thermophilic, cellulolytic bacterium isolated from Obsidian Pool, Yellowstone National Park  

Energy Technology Data Exchange (ETDEWEB)

A novel, obligately anaerobic, extremely thermophilic, cellulolytic bacterium, designated OB47T, was isolated from Obsidian Pool, Yellowstone National Park, WY, USA. The isolate was a non-motile, non-spore forming, Gram-positive rod approximately 2 m long by 0.2 m wide and grew at temperatures between 55-85oC with the optimum at 78oC. The pH range for growth was 6.0-8.0 with values of near 7.0 being optimal. Growth on cellobiose produced the fastest specific growth rates at 0.75 hr-1. The organism also displayed fermentative growth on glucose, maltose, arabinose, fructose, starch, lactose, mannose, sucrose, galactose, xylose, arabinogalactan, Avicel, xylan, filter paper, processed cardboard, pectin, dilute acid-pretreated switchgrass and Populus. OB47T was unable to grow on mannitol, fucose, lignin, Gelrite, acetate, glycerol, ribose, sorbital, carboxymethylcellulose and casein. Yeast extract stimulated growth and thiosulfate, sulfate, nitrate, and sulfur were not reduced. Fermentation ...

2010-02-01

111

Biodegradation of dispersants used in the treatment of oil spills. Biodegradacion de dispersantes utilizados en el tratamineto de derrames de hidrocarburos  

Energy Technology Data Exchange (ETDEWEB)

The biodegradation of one of the most commonly used commercially available dispersants in the treatment of hydrocarbon out-flow was studied. The culture mediums employed were sea water, sterile sea water, and medium M19 (Merck). The latter two were inoculated with two kinds of microorganisms of the Pseudomona genus isolated from sludge from a waste treatment plant. The dispersants used is a commercial product made of anionic sulphated dispersants (1.710% by weight); anionic sulphonated dispersants (0.144%) and non-ionic dispersants (8.146%), both accompained by hidrocarbonated solvent (90%). The degradation processes occurred at differents temperatures (20, 30 and 37). The greatest degradation was obtained at 30 degree centigree. The degradation percentages obtained with the miscroorganisms were 40% of the anionic total and 70% of the non-ionic total after 56 hours for the 5:2 strain and 40% of the anionic total and 9.3% of the non-ionic total after 186 hours for ...

1993-07-01

112

Archive monitoring of pollutants in the Dee River using SIMS analysis of mussels  

International Nuclear Information System (INIS)

Full text: Mt Morgan was mined for copper and gold from 1882 to 1982 and subsequent tailings re-processing ceased in 1990. Direct and accidental deposition of tailings into the adjacent Dee River and acid mine drainage from the mine site continues to impact the Dee River. The Queensland Department of Natural Resources gauging and monitoring station at Kenbula (adjacent to the mine) continuously monitors pH of around 2.8. Twenty kilometres downstream of the mine the pH improves to 3.5. Elevated sediment metal concentrations have been recorded over 50 kilometres downstream in investigations conducted by CSIRO (Jones et al. 1995, 1996) and others. Biological monitoring by Mackey (1988) and subsequently by Duivendoorden (1995,1997), confirmed significant impact on the fish, macrophyte of macro invertebrate populations downstream of the mine. The current AINSE sponsored project will investigate the use of mussels (genus Allathryia) to archive the pollutant load in the ...

2000-11-29