WorldWideScience
 
 
1

A Progressive Network Management Architecture Enabled By Java Technology  

CERN Document Server

This paper proposes a framework based completely on Java technology. The advantages brought about by the use of Java in network management answer some critical problems existing in current systems. With this work we address several factors concerning interoperability and security in heterogeneous network environments. Specifically, we present a manager application and a multithreaded agent engine that make use of a lightweight communication mechanism for message exchange. A MIB parser is introduced to accelerate handling of incoming management requests, and the RSA public-key cryptosystem is implemented to provide both encryption and authentication features. Results, measured in terms of response time, compare favourably with other published work and standard management frameworks.

2010-01-01

2

Model Checking Real Time Java Using Java PathFinder  

Science.gov (United States)

The Real Time Specification for Java (RTSJ) is an augmentation of Java for real time applications of

2005-01-01

3

SOLOMON ISLANDS/ONTONG JAVA  

Science.gov (United States)

SOLOMON ISLANDS/ONTONG JAVA STS111-367-3 SOLOMON ISLANDS/ONTONG JAVA

2002-01-01

4

SOLOMON ISLANDS/ONTONG JAVA, REEF  

Science.gov (United States)

SOLOMON ISLANDS/ONTONG JAVA, REEF STS111-705-36 SOLOMON ISLANDS/ONTONG JAVA, REEF

2002-01-01

5

Performance and Scalability of the NAS Parallel Benchmarks in Java  

Science.gov (United States)

Several features make Java an attractive choice for scientific applications. In order to gauge the

2002-01-01

6

Jeagle: a JAVA Runtime Verification Tool  

Science.gov (United States)

We introduce the temporal logic Jeagle and its supporting tool for runtime verification of Java

2005-01-01

7

Java Mission Evaluation Workstation System  

Science.gov (United States)

The Java Mission Evaluation Workstation System (JMEWS) is a collection of applications designed to

2006-01-01

8

Java Image I/O for VICAR, PDS, and ISIS  

Science.gov (United States)

This library, written in Java, supports input and output of images and metadata (labels) in the

2011-01-01

9

JAVA PathFinder  

Science.gov (United States)

JPF is an explicit state software model checker for Java bytecode. Today, JPF is a swiss army knife

2005-01-01

10

Implementation of the NAS Parallel Benchmarks in Java  

Science.gov (United States)

Several features make Java an attractive choice for High Performance Computing (HPC). In order to

2002-01-01

11

Software Vulnerabilities in Java  

Science.gov (United States)

Page 1. Software Vulnerabilities in Java Fred Long October 2005 CERT ... iii Abstract Java is essentially a safe language with good security features. ...

2005-10-01

12

Java Pathfinder Lecture 2: Under the Hood - NASA  

Science.gov (United States)

verified Java program is executed by JPF, which is a virtual machine ..... only subset of Java instructions can have inter-thread effects ...

13

INDONESIA-J/PAN-MOST OF JAVA, CLOUDS  

Science.gov (United States)

INDONESIA-J/PAN-MOST OF JAVA, CLOUDS STS109-716-63 INDONESIA-J/PAN-MOST OF JAVA, CLOUDS

2002-01-01

15

jFuzz: A Concolic Whitebox Fuzzer for Java  

Science.gov (United States)

We present jFuzz, a automatic testing tool for Java programs. jFuzz is a concolic whitebox fuzzer,

2009-01-01

16

Shuttle Data Center File-Processing Tool in Java  

Science.gov (United States)

A Java-language computer program has been written to facilitate mining of data in files in the

2006-01-01

17

Debris Dispersion Model Using Java 3D  

Science.gov (United States)

This paper describes web based simulation of Shuttle launch operations and debris dispersion. Java

2004-01-01

18

Evaluation of domperidone as a modifier of gamma-radiation-induced emesis. Report for January 1984-January 1986  

Energy Technology Data Exchange (ETDEWEB)

The D2 antidopaminergic drug Domperidone was evaluated singly and in combination with synthetic adrenocorticoid and an H2 antihistamine for its ability to reduce the acute emetic effects of /sup 60/Co whole-body radiation. Random-source adult male dogs were fasted 12 hours, fed a standard meal, injected 44 minutes later and irradiated 47 minutes after that. Four groups of dogs were radiated after drug injections as follows: saline (Con), domperidone (Dom), cimetidine + thiethylperazine (Cim+Thi), and dexamethasone + domperidone + cimetidine (Dex+Dom+Cim). Drug quantities for dogs represented 10 mg Dom, 10 mg Thi, 20 mg Dex, and 300 mg Cim for an average human (70 ka, 1.8 m2). Subjects were exposed on an up-down schedule to determine the radiation necessary to produce vomiting in 50% (ED50) of each group. Emesis onset times, offset times, and number of episodes were recorded. The ED50 of Dex+Dom+Cim was ...

1987-09-01

19

Using the Java language to develop computer based patient records for use on the Internet.  

UK PubMed Central (United Kingdom)

The development of the Java Programming Language by Sun Microsystems has provided a new tool for the development of Internet based applications. Our preliminary work has shown how Java can be used to...Full Text Available

1996-01-01

20

Towards Formalizing the Java Security Architecture of JDK 1.2  

Science.gov (United States)

Page 1. Towards Formalizing the Java Security Architecture of JDK 1.2 Lora L. Kassab1 and Steven J. Greenwald2 ... 4 Java Access Model ...

2011-05-14

 
 
 
 
21

Java Web Start Browser Configuration - NASA  

Science.gov (United States)

Dec 9, 2008 ... This page describes the procedures to configure certain browsers to automatically start Java Web Start applications...

22

The impact of a repeated bout of eccentric exercise on muscular strength, muscle soreness and creatine kinase.  

UK PubMed Central (United Kingdom)

The purpose of this study was to determine if there were any beneficial or detrimental effects regarding delayed onset muscle soreness (DOMS), serum creatine kinase (CK), and maximum concentric strength...Full Text Available

1994-12-01

23

Java-based Graphical User Interface for MAVERIC-II  

Science.gov (United States)

A computer program entitled "Marshall Aerospace Vehicle Representation in C II,

2005-01-01

24

JAVA Stereo Display Toolkit  

Science.gov (United States)

This toolkit provides a common interface for displaying graphical user interface (GUI) components in

2008-01-01

25

Verification of Java Programs using Symbolic Execution and Invariant Generation  

Science.gov (United States)

Software verification is recognized as an important and difficult problem. We present a norel

2004-01-01

26

Probabilistic Simulation for Nanocomposite Characterization Developed and Included in the Computer Code ICAN/JAVA  

Science.gov (United States)

A unique mechanistic method has been developed at the NASA Glenn Research Center to

2008-01-01

27

Information Technology Glossary - NASA  

Science.gov (United States)

Information Technology Glossary of Terms. Applets: Programs that run inside net browsers, usually in Java and typically involving modestly interactive ...

28

Enabling Battlefield Visualization: An Agent-Based Information ...  

Science.gov (United States)

... such as discovery, capabilities registration, lookup, and a ... Java- based toolkit for creating ... Multisensor, Multisource Information Fusion: Architectures ...

2005-06-01

29

Scenario-Based Actions to Upgrade Small-Scale Furniture Producers and their Impacts on Women in Central Java, ...  

Science.gov (United States)

... Producers and their Impacts on Women in Central Java, IndonesiaActions basées sur des scénarios visant à élever ... impact sur les femmes dans le centre de Java, en IndonésieInvestigación-acción basada en...

30

Xyce Parallel Electronic Simulator : reference guide, version 4.1.  

Energy Technology Data Exchange (ETDEWEB)

This document is a reference guide to the Xyce Parallel Electronic Simulator, and is a companion document to the Xyce Users Guide. The focus of this document is (to the extent possible) exhaustively list device parameters, solver options, parser options, and other usage details of Xyce. This document is not intended to be a tutorial. Users who are new to circuit simulation are better served by the Xyce Users Guide.

2009-02-01

31

Xyce Parallel Electronic Simulator : reference guide, version 2.0.  

Energy Technology Data Exchange (ETDEWEB)

This document is a reference guide to the Xyce Parallel Electronic Simulator, and is a companion document to the Xyce Users' Guide. The focus of this document is (to the extent possible) exhaustively list device parameters, solver options, parser options, and other usage details of Xyce. This document is not intended to be a tutorial. Users who are new to circuit simulation are better served by the Xyce Users' Guide.

2004-06-01

32

Information Fusion and Extraction Priorities for Australia's ...  

Science.gov (United States)

... the open source OpenMap Java toolkit from BBN ... 2001), Handbook of Multisensor Data Fusion ... Oxenham (2002), Sensor Registration Using Airlanes ...

2004-03-01

33

Composability, Provability, Reusability (CPR) for Survivability.  

Science.gov (United States)

The goal of this effort Composability, Provability, Reusability (CPR) for Survivability is to address the problem of composition of survivable systems. The particular objective of this project is to construct a formal specification of the Java Virtual Mac...

2002-01-01

34

Impact of climate change on carbon cycle in freshwater ecosystems  

Energy Technology Data Exchange (ETDEWEB)

The impacts of the expected climate change on Finnish lake ecosystems were studied with the biota of the mesohumic Lake Paeaejaervi, southern Finland. Experimental conditions, from small-scale experiments on single species level to a large-scale ecosystem manipulation, were established to simulate directly the future climate and/or loading of nutrients and dissolved organic matter (DOM) from the drainage area. The experimental studies were accomplished by modelling the carbon flow in the pelagic food web as well as the growth of littoral macrophytes. The main hypothese tested were as follows: As a consequence of the climate change (rising temperature and increasing precipitation) the loading of nutrients and dissolved organic matter (DOM) from the drainage area to the lake will increase. In the pelagic zone this will be first reflected i higher productivity of primary producers and bacteria, but will later affect the entire food chain. Increase ...

1996-12-31

35

Test API: Class ImageIDParseBean  

Science.gov (United States)

Overview  Package   Class  Use  Tree  Deprecated  Index  Help   PREV CLASS   NEXT CLASS FRAMES    NO FRAMES SUMMARY:  INNER | FIELD | CONSTR | METHOD DETAIL:  FIELD | CONSTR | METHOD gov.nih.nci.dc.bean Class ImageIDParseBean java.lang.Object | +--java.util.Dictionary

36

Test API: Interface DataAccessBean  

Science.gov (United States)

The DataAccessBean is similar to the Data Access Object (DAO) interface in that the DataAccessBean interface is meant to encapsulate the implementation details of the DynamicJavaBean that accesses persistent storage devices such as RDBMS, flat text file databases, etc.

37

Test API: Class SearchCriteria  

Science.gov (United States)

Overview  Package   Class  Use  Tree  Deprecated  Index  Help   PREV CLASS   NEXT CLASS FRAMES    NO FRAMES SUMMARY:  INNER | FIELD | CONSTR | METHOD DETAIL:  FIELD | CONSTR | METHOD gov.nih.nci.dc.database Class SearchCriteria java.lang.Object |

38

JAtlasView: a Java atlas-viewer for browsing biomedical 3D images and atlases  

UK PubMed Central (United Kingdom)

BackgroundMany three-dimensional (3D) images are routinely collected in biomedical research and a number of digital atlases with associated anatomical and other information have...Full Text Available

39

Semantic annotation of biosystematics literature without training examples  

British Library Electronic Table of Contents (United Kingdom)

This article presents an unsupervised algorithm for semantic annotation of morphological descriptions of whole organisms. The algorithm is able to annotate plain text descriptions with high accuracy at the clause level by exploiting the corpus itself. In other words, the algorithm does not need lexicons, syntactic parsers, training examples, or annotation templates. The evaluation on two real-life description collections in botany and paleontology shows that the algorithm has the following desirable features: (a) reduces/eliminates manual labor required to compile dictionaries and prepare source documents; (b) improves annotation coverage: the algorithm annotates what appears in documents and is not limited by predefined and often incomplete templates; (c) learns clean and reusable concept...

2010-01-01

40

Responses of the toxic cyanobacterium Microcystis aeruginosa to iron and humic substances  

British Library Electronic Table of Contents (United Kingdom)

Iron is an essential element to marine biota. Different types of dissolved organic matter (DOM), such as humic substances have impacts on the marine coastal waters iron chemistry.The aim of the study was to examine how the presence of humic substances (both aquatic and sedimentary) may affect iron bioavailability to the bloom-forming cyanobacterium Microcystis aeruginosa Kutzing incubated on standard and modified mineral BG-11 media. The final iron concentrations in the growth media ranged from 0.1 to 100mM.The results demonstrate that both the growth rate and the concentration of chlorophyll a in cultures of M. aeruginosa are limited by insufficient (a 15-fold as compared with the cultures exposed to iron only at the same concentration. Sedimentary humic acids in the presence of iron at a...

2007-01-01

 
 
 
 
41

Numerical analysis of methane-air combustion considering radiation effect  

Energy Technology Data Exchange (ETDEWEB)

Turbulent premixed methane-air combustion in a cylindrical chamber is numerically simulated considering radiation effect. Reaction rates are considered as minimum rates between Arrhenius rates and eddy break up rates. A five step reduced mechanism is used. Turbulent modeling is done via standard k-{epsilon} model imposed by empirical inlet boundary conditions. Source terms of energy equation consist of reaction rates and radiation effects. The discrete ordinate method (DOM) is employed to solve the radiative transfer equation (RTE) and the weighted sum of gray gas model (WSGGM) is imposed to consider radiation effect of non-gray gases. The results indicate that in the case of turbulent combusting flows, the effect of radiation of gases can affect the temperature and species concentrations. The numerical results obtained considering radiation effect are closer to the experimental data than that of the case without radiation effect. (author)

2008-12-15

42

Numerical analysis of methane-air combustion considering radiation effect  

International Nuclear Information System (INIS)

Turbulent premixed methane-air combustion in a cylindrical chamber is numerically simulated considering radiation effect. Reaction rates are considered as minimum rates between Arrhenius rates and eddy break up rates. A five step reduced mechanism is used. Turbulent modeling is done via standard k-? model imposed by empirical inlet boundary conditions. Source terms of energy equation consist of reaction rates and radiation effects. The discrete ordinate method (DOM) is employed to solve the radiative transfer equation (RTE) and the weighted sum of gray gas model (WSGGM) is imposed to consider radiation effect of non-gray gases. The results indicate that in the case of turbulent combusting flows, the effect of radiation of gases can affect the temperature and species concentrations. The numerical results obtained considering radiation effect are closer to the experimental data than that of the case without radiation effect.

2008-12-01

43

KEGGtranslator: visualizing and converting the KEGG PATHWAY database to various formats  

British Library Electronic Table of Contents (United Kingdom)

Summary: The KEGG PATHWAY database provides a widely used service for metabolic and nonmetabolic pathways. It contains manually drawn pathway maps with information about the genes, reactions and relations contained therein. To store these pathways, KEGG uses KGML, a proprietary XML-format. Parsers and translators are needed to process the pathway maps for usage in other applications and algorithms. We have developed KEGGtranslator, an easy-to-use stand-alone application that can visualize and convert KGML formatted XML-files into multiple output formats. Unlike other translators, KEGGtranslator supports a plethora of output formats, is able to augment the information in translated documents (e.g. MIRIAM annotations) beyond the scope of the KGML document, and amends missing components to fr...

2011-01-01

44

Multiprocessors and Asynchronous Event Handling in the Real-Time Specification for Java  

British Library Electronic Table of Contents (United Kingdom)

The Real-Time Specification for Java (RTSJ) is silent on multiprocessor issues. It attempts not to preclude multiprocessor implementations but provides no direct support. Many areas of the RTSJ leave an implementation considerable freedom on how it provides the defined functionality. One such area is the asynchronous event handling (AEH) model. Events are fired and associated handlers are scheduled for execution in response; handlers have defined scheduling parameters and deadlines. The primary goal of the AEH model is to support a lightweight real-time concurrency model. Hence handlers, in general, do not have dedicated threads. Rather, the implementation is responsible for ensuring that all handlers meet their deadlines. Typically real-time threads are assigned to execute handlers by the...

2011-01-01

45

Xyce parallel electronic simulator : reference guide.  

Energy Technology Data Exchange (ETDEWEB)

This document is a reference guide to the Xyce Parallel Electronic Simulator, and is a companion document to the Xyce Users Guide. The focus of this document is (to the extent possible) exhaustively list device parameters, solver options, parser options, and other usage details of Xyce. This document is not intended to be a tutorial. Users who are new to circuit simulation are better served by the Xyce Users Guide. The Xyce Parallel Electronic Simulator has been written to support, in a rigorous manner, the simulation needs of the Sandia National Laboratories electrical designers. It is targeted specifically to run on large-scale parallel computing platforms but also runs well on a variety of architectures including single processor workstations. It also aims to support a variety of devices and models specific to Sandia needs. This document is intended to complement the Xyce Users Guide. It contains comprehensive, detailed information about a number of topics ...

2011-05-01

46

PhET Teacher Ideas and Activities: Images from Convex Lenses  

Science.gov (United States)

This is an inquiry-based module created specifically for use with the PhET simulation Geometric Optics. It includes a lesson plan for teaching about convex lenses, step-by-step student directions, and a set of Power Point "clicker" questions for use as warm-up questions or informal assessment. This resource is part of a larger collection of interactive Java simulations for students of physics, developed by the Physics Education Technology project at the University of Colorado.

2009-05-20

47

Comparing Selected Criteria of Programming Languages Java, PHP, C++, Perl, Haskell, AspectJ, Ruby, COBOL, Bash Scripts and Scheme Revision 1.0 - a Team CPLgroup COMP6411-S10 Term Report  

CERN Document Server

Comparison of programming languages is a common topic of discussion among software engineers. Few languages ever become sufficiently popular that they are used by more than a few people or find their niche in research or education; but professional programmers can easily use dozens of different languages during their career. Multiple programming languages are designed, specified, and implemented every year in order to keep up with the changing programming paradigms, hardware evolution, etc. In this paper we present a comparative study between ten programming languages: Haskell, Java, Perl, C++, AspectJ, COBOL, Ruby, PHP, Bash Scripts, and Scheme; with respect of the following criteria: Secure programming practices, web applications development, web services design and composition, object oriented-based abstraction, reflection, aspect-orientation, functional programming, declarative programming, batch scripting, and user interface prototype design.

2010-01-01

48

CleverFarm - A SuperSCADA system for wind farms  

Energy Technology Data Exchange (ETDEWEB)

The CleverFarm project started out to build an integrated monitoring system for wind farms, where all information would be available and could be used across the wind farm for maintenance and component health assessments. This would enable wind farm operators to prioritise their efforts, since they have a good view of the farm status from home. A large emphasis was placed on the integration of condition monitoring approaches in the central system, enabling estimates of the remaining lifetime of components, especially in the nacelle. During the 3,5 years of the project, software and hardware was developed and installed in two wind farms in Denmark and Germany. The connected hardware included two different condition monitoring systems based on vibration sensors from Gram&Juhl and ISET, plus a camera system developed by Overspeed. Additionally, short-term predictions of the wind farm output were delivered by DMI and Risoes Prediktor system throughout the period of the project. All ...

2004-08-01

49

The CDMS II data acquisition system  

Energy Technology Data Exchange (ETDEWEB)

The Data Acquisition System for the CDMS II dark matter experiment was designed and built when the experiment moved to its new underground installation at the Soudan Lab. The combination of remote operation and increased data load necessitated a completely new design. Elements of the original LabView system remained as stand-alone diagnostic programs, but the main data processing moved to a VME-based system with custom electronics for signal conditioning, trigger formation and buffering. The data rate was increased 100-fold and the automated cryogenic system was linked to the data acquisition. A modular server framework with associated user interfaces was implemented in Java to allow control and monitoring of the entire experiment remotely.

2011-01-01

50

Simple high-throughput annotation pipeline (SHAP)  

British Library Electronic Table of Contents (United Kingdom)

Summary: SHAP (simple high-throughput annotation pipeline) is a lightweight and scalable sequence annotation pipeline capable of supporting research efforts that generate or utilize large volumes of DNA sequence data. The software provides Grid capable analysis, relational storage and Web-based full-text searching of annotation results. Implemented in Java, SHAP recognizes the limited resources of many smaller research groups. Availability: Source code is freely available under GPLv3 at External Link Not Shown. Contact: matt.demaere@unsw.edu.au; r.cavicchioli@unsw.edu.au

2011-01-01

51

Practical Ext JS Projects with Gears  

CERN Document Server

Discover Ext JS, one of today's most powerful and highly regarded JavaScript frameworks, with perhaps the best set of GUI widgets around, and a whole host of components that make developing client--side applications a breeze. Using a pragmatic approach, you'll dissect seven full--fledged applications, covering *How Ext JS allows you to create these applications with a slick user interface with a minimum of effort*How the other parts of Ext JS aside from the GUI widgets provide many of the capabilities modern applications need, such as Ajax and data mechanisms *How other technologies such as Ge

2009-01-01

52

Beginning Scala  

CERN Document Server

The open source Scala language is a Java--based dynamic scripting, functional programming language. Moreover, this highly scalable scripting language lends itself well to building Cloud--based/deliverable Software as a Service (SaaS) online applications. Written by Lift Scala web framework founder and lead Dave Pollak, Beginning Scala takes a down--to--earth approach to teaching Scala that leads you through simple examples that can be combined to build complex, scalable systems and applications. This book introduces you to the Scala programming language and then guides you through Scala constr

2009-01-01

53

Simulation of embedded systems for energy consumption estimation  

Energy Technology Data Exchange (ETDEWEB)

Technology developments in semiconductor fabrication along with a rapid expansion of the market for portable devices, such as PDAs and mobile phones, make the energy consumption of embedded systems a major problem. Indeed the need to provide an increasing number of computational intensive applications and at the same time to maximize the battery life of portable devices can be seen as incompatible trends. System simulation is a flexible and convenient method for analyzinging and exploring the performance of a system or sub-system. At the same time, the increasing use of computational intensive applications strengthens the need to maximize the battery life of portable devices. As a consequence, the simulation of embedded systems for energy consumption estimation is becoming essential in order to study and explore the influence of system design choices on the system energy consumption. The original publications presented in the second part of this thesis propose several frameworks for ...

2009-07-01

54

eDNA: A Bio-Inspired Reconfigurable Hardware Cell Architecture Supporting Self-organisation and Self-healing  

DEFF Research Database (Denmark)

This paper presents the concept of a biological inspired reconfigurable hardware cell architecture which supports self-organisation and self-healing. Two fundamental processes in biology, namely fertilization-to-birth and cell self-healing have inspired the development of this cell architecture. In biology as well as in our hardware cell architecture it is the DNA which enables these processes. We propose a platform based on the electronic DNA (eDNA) and show through simulation, its capabilities as a new generation of robust reconfigurable hardware platforms. We have created a Java based simulator to simulate our self-organisation and self-healing algorithms and the results obtained from this looks promising.

2009-01-01

55

Traditional Medicine Collection Tracking System (TM-CTS): A database for ethnobotanically driven drug-discovery programs  

British Library Electronic Table of Contents (United Kingdom)

Ethnopharmacological relevance: Ethnobotanically driven drug-discovery programs include data related to many aspects of the preparation of botanical medicines, from initial plant collection to chemical extraction and fractionation. The Traditional Medicine Collection Tracking System (TM-CTS) was created to organize and store data of this type for an international collaborative project involving the systematic evaluation of commonly used Traditional Chinese Medicinal plants. Materials and methods: The system was developed using domain-driven design techniques, and is implemented using Java, Hibernate, PostgreSQL, Business Intelligence and Reporting Tools (BIRT), and Apache Tomcat. Results: The TM-CTS relational database schema contains over 70 data types, comprising over 500 data fields. Th...

2011-01-01

56

Reconfigurations dynamiques de services dans un intergiciel a composants CORBA CCM  

CERN Document Server

Today, component oriented middlewares are used to design, develop and deploy easily distributed applications, by ensuring the heterogeneity, interoperability, and reuse of the software modules, and the separation between the business code encapsulated in the components and the system code managed by the containers. Several standards answer this definition such as: CCM (CORBA Component Model), EJB (Enterprise Java Beans) and .Net. However these standards offer a limited and fixed number of system services, removing any possibility to add system services or to reconfigure dynamically the middleware. Our works propose mechanisms to add and to adapt dynamically the system services, based on a reconfiguration language which is dynamically adaptable to the need of the reconfiguration, and on a tool of dynamic reconfiguration, a prototype was achieved for the OpenCCM platform, that is an implementation of the CCM specification. This work was partially financed by the ...

2004-01-01

57

PDBpaint, a visualization webservice to tag protein structures with sequence annotations  

British Library Electronic Table of Contents (United Kingdom)

Summary: Protein features are often displayed along the linear sequence of amino acids that make up that protein, but in reality these features occupy a position in the folded proteins 3D space. Mapping sequence features to known or predicted protein structures is useful when trying to deduce the function of those features and when evaluating sequence or structural predictions. To facilitate this goal, we developed PDBpaint, a simple tool that displays protein sequence features gathered from bioinformatics resources on top of protein structures, which are displayed in an interactive window (using the Jmol Java viewer). PDBpaint can be used either with existing protein structures or with novel structures provided by the user. The current version of PDBpaint allows the visualization of annot...

2011-01-01

58

Cancers | Special Issue: Advances and Research Progress in Hepatocellular Carcinoma  

Wastenet

...comAbstract: Hepatocellular carcinoma (HCC), once thought to be a rare tumor in North America, is a rapidly increasing type of cancer in recent years in the United States. Current treatment modalities to halt the disease progression are only marginally effective. The mainstay treatment ...In addition, NM was shown to down-regulate urokinase plasminogen activator (by fibrin zymography) and up-regulate tissue inhibitors of metalloproteinases (by reverse zymography) in another HCC cell line, Sk-Hep-1. MMP-2 and MMP-9 activities were further modulated by cytokines, inducers and inhibitors, including NM. In ... Our results suggest that NM is an excellent candidate for therapeutic use in the treatment HCC by inhibiting critical parameters in cancer development and progression, such as proliferation, invasion and metastasis, and by inducing apoptosis. Last update: 2 September 2011 JavaScript seems ...

59

Reducing VMTs through Transit-On-Demand with GPS and satellite communications  

Energy Technology Data Exchange (ETDEWEB)

As a partial solution to the problem of increasing foreign petroleum imports,urban congestion, and air pollution from automobiles, NREL researchers have successfully demonstrated a transportation concept called Transit-On-Demand (TOD). TOD uses the global positioning system (GPS) to locate all vehicles in a fleet, two-way communications between the vehicles and a central computer-server, and advanced dispatching and routing software to control the movement of vehicles within the fleet. Reducing the vehicle-miles-travelled (VMTs) through implementing efficient transportation systems such as TOD, results in less energy being required for transportation and a decrease in the amount of required imported petroleum. Through development of an advanced world wide web site and use of the new Java{trademark} Internet programming language, the demonstration allows visitors to the web site to see updates of vehicle position on a map every 20 seconds,while effectively ...

1996-10-01

60

beta-Lactamases among extended-spectrum beta-lactamase (ESBL)-resistant Salmonella from poultry, poultry products and human patients in The Netherlands  

DEFF Research Database (Denmark)

Objectives: The purpose of this work was to study the genetic determinants responsible for extended-spectrum beta-lactamase (ESBL) resistance of Salmonella isolated from Dutch poultry, poultry meat and hospitalized humans. Methods: Thirty-four ESBL-resistant Salmonella isolates from The Netherlands were tested towards 21 antimicrobial agents. PCR and sequencing were used to determine the underlying genetic determinants responsible for the ESBL phenotypes. The transferability of the ESBL phenotypes was tested by conjugation to a susceptible Salmonella enterica serovar Dublin and plasmid purification, restriction fragment length polymorphism (RFLP) and pulsed-field gel electrophoresis (PFGE) were employed to further characterize a subset of the isolates. Results: A great genetic diversity was seen among the isolates. The bla(TEM-52) gene was most predominant and was found among Salmonella enterica serovars Blockley, Thomson, London, Enteritidis phage type 14b, Paratyphi B, Virchow and ...

2005-01-01

 
 
 
 
61

[caCORE: core architecture of bioinformation on cancer research in America].  

Science.gov (United States)

A critical factor in the advancement of biomedical research is the ease with which data can be integrated, redistributed and analyzed both within and across domains. This paper summarizes the Biomedical Information Core Infrastructure built by National Cancer Institute Center for Bioinformatics in America (NCICB). The main product from the Core Infrastructure is caCORE--cancer Common Ontologic Reference Environment, which is the infrastructure backbone supporting data management and application development at NCICB. The paper explains the structure and function of caCORE: (1) Enterprise Vocabulary Services (EVS). They provide controlled vocabulary, dictionary and thesaurus services, and EVS produces the NCI Thesaurus and the NCI Metathesaurus; (2) The Cancer Data Standards Repository (caDSR). It provides a metadata registry for common data elements. (3) Cancer Bioinformatics Infrastructure Objects (caBIO). They provide Java, Simple Object Access Protocol and ...

2006-04-18

62

NATIONAL GEOSCIENCE DATA REPOSITORY SYSTEM PHASE III: IMPLEMENTATION AND OPERATION OF THE REPOSITORY  

Energy Technology Data Exchange (ETDEWEB)

The NGDRS has facilitated 85% of cores, cuttings, and other data identified available for transfer to the public sector. Over 12 million linear feet of cores and cuttings, in addition to large numbers of paleontological samples and are now available for public use. To date, with industry contributions for program operations and data transfers, the NGDRS project has realized a 6.5 to 1 return on investment to Department of Energy funds. Large-scale transfers of seismic data have been evaluated, but based on the recommendation of the NGDRS steering committee, cores have been given priority because of the vast scale of the seismic data problem relative to the available funding. The rapidly changing industry conditions have required that the primary core and cuttings preservation strategy evolve as well. Additionally, the NGDRS clearinghouse is evaluating the viability of transferring seismic data covering the western shelf of the Florida Gulf Coast. AGI remains actively involved in ...

2002-10-01

63

NATIONAL GEOSCIENCE DATA REPOSITORY SYSTEM PHASE III: IMPLEMENTATION AND OPERATION OF THE REPOSITORY  

Energy Technology Data Exchange (ETDEWEB)

The NGDRS has facilitated 85% of cores, cuttings, and other data identified available for transfer to the public sector. Over 12 million linear feet of cores and cuttings, in addition to large numbers of paleontological samples and are now available for public use. To date, with industry contributions for program operations and data transfers, the NGDRS project has realized a 6.5 to 1 return on investment to Department of Energy funds. Large-scale transfers of seismic data have been evaluated, but based on the recommendation of the NGDRS steering committee, cores have been given priority because of the vast scale of the seismic data problem relative to the available funding. The rapidly changing industry conditions have required that the primary core and cuttings preservation strategy evolve as well. Additionally, the NGDRS clearinghouse is evaluating the viability of transferring seismic data covering the western shelf of the Florida Gulf Coast. AGI remains actively involved in ...

2003-04-01

64

Feasibility study on the demonstrative test on the hybrid mini hydroelectric power generation technology. 2; Hybrid gata mini suiryoku hatsuden gijutsu ni kakawaru jissho shiken kanosei chosa. 2  

Energy Technology Data Exchange (ETDEWEB)

A study was made for the purpose of electrification of unelectrified zones of the mountainous areas in developing countries using extremely small hydroelectric power facilities. The target for this project is a development of a micro hydroelectric power system with a size of about 5kW, which is estimated regarding that 1 village has 80 houses and each house needs electricity of 60W. In the study, the low-head system using a weir of irrigation channels in Subang pref. of West Java state was selected by the evaluation of access, stability of flow rate, natural conditions, etc. The hydroelectric power plant is of a flow-in method in which water is taken from the left bank and is injected/discharged to the downstream of the left bank. As the hybrid complementary power source, hybrid battery with a two-hour charging time at peak and a capacity of 3.5kWh was considered. When estimating the construction cost of the hybrid micro hydroelectric power system and equalizing by ...

1996-03-01

65

Composing simulations using persistent software components  

Energy Technology Data Exchange (ETDEWEB)

The traditional process for developing large-scale simulations is cumbersome, time consuming, costly, and in some cases, inadequate. The topics of software components and component-based software engineering are being explored by software professionals in academic and industrial settings. A component is a well-delineated, relatively independent, and replaceable part of a software system that performs a specific function. Many researchers have addressed the potential to derive a component-based approach to simulations in general, and a few have focused on military simulations in particular. In a component-based approach, functional or logical blocks of the simulation entities are represented as coherent collections of components satisfying explicitly defined interface requirements. A simulation is a top-level aggregate comprised of a collection of components that interact with each other in the context of a simulated environment. A component may represent a simulation artifact, an ...

1999-03-01

66

Resource Management in Broadband Communication Networks  

DEFF Research Database (Denmark)

This thesis - Resource Management in Broadband Communication Networks - deals with different ways of optimizing the available resources of data- or telecommunication networks. Especially topics like optimal routing, load balancing and fast recovery of routes in case of link failures are covered. The first part gives a brief description of some of the existing protocols for routing and controlling resources, such as RSVP, OSPF, BGP, PNNI, etc. The remaining part concerns the following two fundamentally different approaches to resource management etc.: - Software agents - Simulated ants In the beginning of the part concerning software agents a description of what exactly constitutes software agents, according to the scientists and according to the organization, FIPA is given. After this, the main results from the IMPACT project are presented. The IMPACT project is an EU-project that aimed at developing a demonstration platform, where software agents handled virtually all aspects of ...

2003-01-01