Active uptake of substance P carboxy-terminal heptapeptide (5-11) into rat brain and rabbit spinal cord slices

Energy Technology Data Exchange (ETDEWEB)

Nakata, Y; Kusaka, Y; Yajima, H; Segawa, T

1981-12-01

We previously reported that nerve terminals and glial cells lack an active uptake system capable of terminating transmitter action of substance P (SP). In the present study, we demonstrated the existence of an active uptake system for SP carboxy-terminal heptapeptide, (5-11)SP. When the slices from either rat brain or rabbit spinal cord were incubated with (3H)(5-11)SP, the uptake of (5-11)SP into slices was observed. The uptake system has the properties of an active transport mechanism: it is dependent on temperature and sensitive to hypoosmotic treatment and is inhibited by ouabain and dinitrophenol (DNP). In the brain, (5-11)SP was accumulated by means of a high-affinity and a low-affinity uptake system. The Km and the Vmax values for the high-affinity system were 4.20 x 10(-8) M and 7.59 fmol/10 mg wet weight/min, respectively, whereas these values for the low-affinity system were 1.00 x 10(-6) M and 100 fmol/10 mg wet weight/min, respectively. In the spinal cord, there was only one uptake system, with a Km value of 2.16 x 10(-7) M and Vmax value of 26.2 fmol/10 mg wet weight/min. These results suggest that when SP is released from nerve terminals, it is hydrolysed into (5-11)SP before or after acting as a neurotransmitter, which is in turn accumulated into nerve terminals. Therefore, the uptake system may represent a possible mechanism for the inactivation of SP.

Hyperpolarization-activated inward leakage currents caused by deletion or mutation of carboxy-terminal tyrosines of the Na+/K+-ATPase {alpha} subunit.

Science.gov (United States)

Meier, Susan; Tavraz, Neslihan N; Dürr, Katharina L; Friedrich, Thomas

2010-02-01

The Na(+)/K(+)-ATPase mediates electrogenic transport by exporting three Na(+) ions in exchange for two K(+) ions across the cell membrane per adenosine triphosphate molecule. The location of two Rb(+) ions in the crystal structures of the Na(+)/K(+)-ATPase has defined two "common" cation binding sites, I and II, which accommodate Na(+) or K(+) ions during transport. The configuration of site III is still unknown, but the crystal structure has suggested a critical role of the carboxy-terminal KETYY motif for the formation of this "unique" Na(+) binding site. Our two-electrode voltage clamp experiments on Xenopus oocytes show that deletion of two tyrosines at the carboxy terminus of the human Na(+)/K(+)-ATPase alpha(2) subunit decreases the affinity for extracellular and intracellular Na(+), in agreement with previous biochemical studies. Apparently, the DeltaYY deletion changes Na(+) affinity at site III but leaves the common sites unaffected, whereas the more extensive DeltaKETYY deletion affects the unique site and the common sites as well. In the absence of extracellular K(+), the DeltaYY construct mediated ouabain-sensitive, hyperpolarization-activated inward currents, which were Na(+) dependent and increased with acidification. Furthermore, the voltage dependence of rate constants from transient currents under Na(+)/Na(+) exchange conditions was reversed, and the amounts of charge transported upon voltage pulses from a certain holding potential to hyperpolarizing potentials and back were unequal. These findings are incompatible with a reversible and exclusively extracellular Na(+) release/binding mechanism. In analogy to the mechanism proposed for the H(+) leak currents of the wild-type Na(+)/K(+)-ATPase, we suggest that the DeltaYY deletion lowers the energy barrier for the intracellular Na(+) occlusion reaction, thus destabilizing the Na(+)-occluded state and enabling inward leak currents. The leakage currents are prevented by aromatic amino acids at the

The Contributions of the Amino and Carboxy Terminal Domains of Flightin to the Biomechanical Properties of Drosophila Flight Muscle Thick Filaments.

Science.gov (United States)

Gasek, Nathan S; Nyland, Lori R; Vigoreaux, Jim O

2016-04-27

Flightin is a myosin binding protein present in Pancrustacea. In Drosophila, flightin is expressed in the indirect flight muscles (IFM), where it is required for the flexural rigidity, structural integrity, and length determination of thick filaments. Comparison of flightin sequences from multiple Drosophila species revealed a tripartite organization indicative of three functional domains subject to different evolutionary constraints. We use atomic force microscopy to investigate the functional roles of the N-terminal domain and the C-terminal domain that show different patterns of sequence conservation. Thick filaments containing a C-terminal domain truncated flightin (fln(ΔC44)) are significantly shorter (2.68 ± 0.06 μm; p thick filaments containing a full length flightin (fln⁺; 3.21 ± 0.05 μm) and thick filaments containing an N-terminal domain truncated flightin (fln(ΔN62); 3.21 ± 0.06 μm). Persistence length was significantly reduced in fln(ΔN62) (418 ± 72 μm; p thick filament bending propensity. Our results indicate that the flightin amino and carboxy terminal domains make distinct contributions to thick filament biomechanics. We propose these distinct roles arise from the interplay between natural selection and sexual selection given IFM's dual role in flight and courtship behaviors.

Uncovering a Role for the Tail of the Dictyostelium discoideum SadA Protein in Cell-Substrate Adhesion ▿ †

Science.gov (United States)

Kowal, Anthony S.; Chisholm, Rex L.

2011-01-01

Previous work from our laboratory showed that the Dictyostelium discoideum SadA protein plays a central role in cell-substrate adhesion. SadA null cells exhibit a loss of adhesion, a disrupted actin cytoskeleton, and a cytokinesis defect. How SadA mediates these phenotypes is unknown. This work addresses the mechanism of SadA function, demonstrating an important role for the C-terminal cytoplasmic tail in SadA function. We found that a SadA tailless mutant was unable to rescue the sadA adhesion deficiency, and overexpression of the SadA tail domain reduced adhesion in wild-type cells. We also show that SadA is closely associated with the actin cytoskeleton. Mutagenesis studies suggested that four serine residues in the tail, S924/S925 and S940/S941, may regulate association of SadA with the actin cytoskeleton. Glutathione S-transferase pull-down assays identified at least one likely interaction partner of the SadA tail, cortexillin I, a known actin bundling protein. Thus, our data demonstrate an important role for the carboxy-terminal cytoplasmic tail in SadA function and strongly suggest that a phosphorylation event in this tail regulates an interaction with cortexillin I. Based on our data, we propose a model for the function of SadA. PMID:21441344

Carboxy-terminal truncation activates glp-1 protein to specify vulval fates in Caenorhabditis elegans.

Science.gov (United States)

Mango, S E; Maine, E M; Kimble, J

1991-08-29

The glp-1 and lin-12 genes encode homologous transmembrane proteins that may act as receptors for cell interactions during development. The glp-1 product is required for induction of germ-line proliferation and for embryogenesis. By contrast, lin-12 mediates somatic cell interactions, including those between the precursor cells that form the vulval hypodermis (VPCs). Here we analyse an unusual allele of glp-1, glp-1(q35), which displays a semidominant multivulva phenotype (Muv), as well as the typical recessive, loss-of-function Glp phenotypes (sterility and embryonic lethality). We find that the effects of glp-1(q35) on VPC development mimic those of dominant lin-12 mutations, even in the absence of lin-12 activity. The glp-1(q35) gene bears a nonsense mutation predicted to eliminate the 122 C-terminal amino acids, including a ProGluSerThr (PEST) sequence thought to destabilize proteins. We suggest that the carboxy terminus bears a negative regulatory domain which normally inactivates glp-1 in the VPCs. We propose that inappropriate glp-1(q35) activity can substitute for lin-12 to determine vulval fate, perhaps by driving the VPCs to proliferate.

The carboxy-terminal pyridinoline cross-linked telopeptide of type I collagen in serum as a marker of bone resorption

DEFF Research Database (Denmark)

Hassager, C; Jensen, L T; Pødenphant, J

1994-01-01

Carboxy-terminal pyridinoline cross-linked telopeptide of type I collagen (ICTP) in serum has recently been proposed as a new biochemical marker of bone resorption. In the present study we compared serum ICTP with radiopharmaceutical and histomorphometric measurements of bone turnover...... in postmenopausal women with mild osteoporosis, and assessed the effect of hormone replacement therapy (HRT) (2 mg 17 beta-estradiol plus 1 mg norethisterone daily) and anabolic steroid therapy (50 mg nandrolone decanoate (ND) i.m. every 3 weeks) on serum ICTP in two double-blind placebo-controlled studies with 55...... to 75-year-old women. Serum ICTP measured by radioimmunoassay (RIA) correlated significantly with the 24-hour whole body retention of 99m-technetium diphosphonate (Rho = 0.47, P

Nonlinear dynamics of C-terminal tails in cellular microtubules

Science.gov (United States)

Sekulic, Dalibor L.; Sataric, Bogdan M.; Zdravkovic, Slobodan; Bugay, Aleksandr N.; Sataric, Miljko V.

2016-07-01

The mechanical and electrical properties, and information processing capabilities of microtubules are the permanent subject of interest for carrying out experiments in vitro and in silico, as well as for theoretical attempts to elucidate the underlying processes. In this paper, we developed a new model of the mechano-electrical waves elicited in the rows of very flexible C-terminal tails which decorate the outer surface of each microtubule. The fact that C-terminal tails play very diverse roles in many cellular functions, such as recruitment of motor proteins and microtubule-associated proteins, motivated us to consider their collective dynamics as the source of localized waves aimed for communication between microtubule and associated proteins. Our approach is based on the ferroelectric liquid crystal model and it leads to the effective asymmetric double-well potential which brings about the conditions for the appearance of kink-waves conducted by intrinsic electric fields embedded in microtubules. These kinks can serve as the signals for control and regulation of intracellular traffic along microtubules performed by processive motions of motor proteins, primarly from kinesin and dynein families. On the other hand, they can be precursors for initiation of dynamical instability of microtubules by recruiting the proper proteins responsible for the depolymerization process.

Nonlinear dynamics of C–terminal tails in cellular microtubules

Energy Technology Data Exchange (ETDEWEB)

Sekulic, Dalibor L., E-mail: dalsek@uns.ac.rs; Sataric, Bogdan M.; Sataric, Miljko V. [University of Novi Sad, Faculty of Technical Sciences, Novi Sad (Serbia); Zdravkovic, Slobodan [University of Belgrade, Institute of Nuclear Sciences Vinca, Belgrade (Serbia); Bugay, Aleksandr N. [Laboratory of Radiation Biology, Joint Institute for Nuclear Research, Dubna (Russian Federation)

2016-07-15

The mechanical and electrical properties, and information processing capabilities of microtubules are the permanent subject of interest for carrying out experiments in vitro and in silico, as well as for theoretical attempts to elucidate the underlying processes. In this paper, we developed a new model of the mechano–electrical waves elicited in the rows of very flexible C–terminal tails which decorate the outer surface of each microtubule. The fact that C–terminal tails play very diverse roles in many cellular functions, such as recruitment of motor proteins and microtubule–associated proteins, motivated us to consider their collective dynamics as the source of localized waves aimed for communication between microtubule and associated proteins. Our approach is based on the ferroelectric liquid crystal model and it leads to the effective asymmetric double-well potential which brings about the conditions for the appearance of kink–waves conducted by intrinsic electric fields embedded in microtubules. These kinks can serve as the signals for control and regulation of intracellular traffic along microtubules performed by processive motions of motor proteins, primarly from kinesin and dynein families. On the other hand, they can be precursors for initiation of dynamical instability of microtubules by recruiting the proper proteins responsible for the depolymerization process.

Nonlinear dynamics of C–terminal tails in cellular microtubules

International Nuclear Information System (INIS)

Sekulic, Dalibor L.; Sataric, Bogdan M.; Sataric, Miljko V.; Zdravkovic, Slobodan; Bugay, Aleksandr N.

2016-01-01

The mechanical and electrical properties, and information processing capabilities of microtubules are the permanent subject of interest for carrying out experiments in vitro and in silico, as well as for theoretical attempts to elucidate the underlying processes. In this paper, we developed a new model of the mechano–electrical waves elicited in the rows of very flexible C–terminal tails which decorate the outer surface of each microtubule. The fact that C–terminal tails play very diverse roles in many cellular functions, such as recruitment of motor proteins and microtubule–associated proteins, motivated us to consider their collective dynamics as the source of localized waves aimed for communication between microtubule and associated proteins. Our approach is based on the ferroelectric liquid crystal model and it leads to the effective asymmetric double-well potential which brings about the conditions for the appearance of kink–waves conducted by intrinsic electric fields embedded in microtubules. These kinks can serve as the signals for control and regulation of intracellular traffic along microtubules performed by processive motions of motor proteins, primarly from kinesin and dynein families. On the other hand, they can be precursors for initiation of dynamical instability of microtubules by recruiting the proper proteins responsible for the depolymerization process.

Peptides derived from human galectin-3 N-terminal tail interact with its carbohydrate recognition domain in a phosphorylation-dependent manner

Energy Technology Data Exchange (ETDEWEB)

Berbís, M. Álvaro [Chemical and Physical Biology Department, Centro de Investigaciones Biológicas, CSIC, 28040 Madrid (Spain); André, Sabine [Institute of Physiological Chemistry, Faculty of Veterinary Medicine, Ludwig-Maximilians University, 80539 Munich (Germany); Cañada, F. Javier [Chemical and Physical Biology Department, Centro de Investigaciones Biológicas, CSIC, 28040 Madrid (Spain); Pipkorn, Rüdiger [Central Peptide Synthesis Unit, German Cancer Research Center, 69120 Heidelberg (Germany); Ippel, Hans [Department of Biochemistry, CARIM, University of Maastricht, Maastricht (Netherlands); Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN 55455 (United States); Mayo, Kevin H. [Department of Biochemistry, Molecular Biology and Biophysics, University of Minnesota, Minneapolis, MN 55455 (United States); Kübler, Dieter [Biomolecular Interactions, German Cancer Research Center, 69120 Heidelberg (Germany); Gabius, Hans-Joachim [Institute of Physiological Chemistry, Faculty of Veterinary Medicine, Ludwig-Maximilians University, 80539 Munich (Germany); Jiménez-Barbero, Jesús, E-mail: jjbarbero@cib.csic.es [Chemical and Physical Biology Department, Centro de Investigaciones Biológicas, CSIC, 28040 Madrid (Spain)

2014-01-03

Highlights: •Galectin-3 is composed of a carbohydrate recognition domain and an N-terminal tail. •Synthetic peptides derived from the tail are shown to interact with the CRD. •This interaction is modulated by Ser- and Tyr-phosphorylation of the peptides. -- Abstract: Galectin-3 (Gal-3) is a multi-functional effector protein that functions in the cytoplasm and the nucleus, as well as extracellularly following non-classical secretion. Structurally, Gal-3 is unique among galectins with its carbohydrate recognition domain (CRD) attached to a rather long N-terminal tail composed mostly of collagen-like repeats (nine in the human protein) and terminating in a short non-collagenous terminal peptide sequence unique in this lectin family and not yet fully explored. Although several Ser and Tyr sites within the N-terminal tail can be phosphorylated, the physiological significance of this post-translational modification remains unclear. Here, we used a series of synthetic (phospho)peptides derived from the tail to assess phosphorylation-mediated interactions with {sup 15}N-labeled Gal-3 CRD. HSQC-derived chemical shift perturbations revealed selective interactions at the backface of the CRD that were attenuated by phosphorylation of Tyr 107 and Tyr 118, while phosphorylation of Ser 6 and Ser 12 was essential. Controls with sequence scrambling underscored inherent specificity. Our studies shed light on how phosphorylation of the N-terminal tail may impact on Gal-3 function and prompt further studies using phosphorylated full-length protein.

Peptides derived from human galectin-3 N-terminal tail interact with its carbohydrate recognition domain in a phosphorylation-dependent manner

International Nuclear Information System (INIS)

Berbís, M. Álvaro; André, Sabine; Cañada, F. Javier; Pipkorn, Rüdiger; Ippel, Hans; Mayo, Kevin H.; Kübler, Dieter; Gabius, Hans-Joachim; Jiménez-Barbero, Jesús

2014-01-01

Highlights: •Galectin-3 is composed of a carbohydrate recognition domain and an N-terminal tail. •Synthetic peptides derived from the tail are shown to interact with the CRD. •This interaction is modulated by Ser- and Tyr-phosphorylation of the peptides. -- Abstract: Galectin-3 (Gal-3) is a multi-functional effector protein that functions in the cytoplasm and the nucleus, as well as extracellularly following non-classical secretion. Structurally, Gal-3 is unique among galectins with its carbohydrate recognition domain (CRD) attached to a rather long N-terminal tail composed mostly of collagen-like repeats (nine in the human protein) and terminating in a short non-collagenous terminal peptide sequence unique in this lectin family and not yet fully explored. Although several Ser and Tyr sites within the N-terminal tail can be phosphorylated, the physiological significance of this post-translational modification remains unclear. Here, we used a series of synthetic (phospho)peptides derived from the tail to assess phosphorylation-mediated interactions with 15 N-labeled Gal-3 CRD. HSQC-derived chemical shift perturbations revealed selective interactions at the backface of the CRD that were attenuated by phosphorylation of Tyr 107 and Tyr 118, while phosphorylation of Ser 6 and Ser 12 was essential. Controls with sequence scrambling underscored inherent specificity. Our studies shed light on how phosphorylation of the N-terminal tail may impact on Gal-3 function and prompt further studies using phosphorylated full-length protein

Influence of C-terminal tail deletion on structure and stability of hyperthermophile Sulfolobus tokodaii RNase HI.

Science.gov (United States)

Chen, Lin; Zhang, Ji-Long; Zheng, Qing-Chuan; Chu, Wen-Ting; Xue, Qiao; Zhang, Hong-Xing; Sun, Chia-Chung

2013-06-01

The C-terminus tail (G144-T149) of the hyperthermophile Sulfolobus tokodaii (Sto-RNase HI) plays an important role in this protein's hyperstabilization and may therefore be a good protein stability tag. Detailed understanding of the structural and dynamic effects of C-terminus tail deletion is required for gaining insights into the thermal stability mechanism of Sto-RNase HI. Focused on Sulfolobus tokodaii RNase HI (Sto-RNase HI) and its derivative lacking the C-terminal tail (ΔC6 Sto-RNase HI) (PDB codes: 2EHG and 3ALY), we applied molecular dynamics (MD) simulations at four different temperatures (300, 375, 475, and 500 K) to examine the effect of the C-terminal tail on the hyperstabilization of Sto-RNase HI and to investigate the unfolding process of Sto-RNase HI and ΔC6 Sto-RNase HI. The simulations suggest that the C-terminal tail has significant impact in hyperstabilization of Sto-RNase HI and the unfolding of these two proteins evolves along dissimilar pathways. Essential dynamics analysis indicates that the essential subspaces of the two proteins at different temperatures are non-overlapping within the trajectories and they exhibit different directions of motion. Our work can give important information to understand the three-state folding mechanism of Sto-RNase HI and to offer alternative strategies to improve the protein stability.

Functional mechanism of C-terminal tail in the enzymatic role of porcine testicular carbonyl reductase: a combined experiment and molecular dynamics simulation study of the C-terminal tail in the enzymatic role of PTCR.

Directory of Open Access Journals (Sweden)

Minky Son

Full Text Available Porcine testicular carbonyl reductase, PTCR which is one of the short chain dehydrogenases/reductases (SDR superfamily catalyzes the NADPH-dependent reduction of carbonyl compounds including steroids and prostaglandins. Previously we reported C-terminal tail of PTCR was deleted due to a nonsynonymous single nucleotide variation (nsSNV. Here we identified from kinetic studies that the enzymatic properties for 5α-dihydrotestosterone (5α-DHT were different between wild-type and C-terminal-deleted PTCRs. Compared to wild-type PTCR, C-terminal-deleted PTCR has much higher reduction rate. To investigate structural difference between wild-type and C-terminal-deleted PTCRs upon 5α-DHT binding, we performed molecular dynamics simulations for two complexes. Using trajectories, molecular interactions including hydrogen bonding patterns, distance between 5α-DHT and catalytic Tyr193, and interaction energies are analyzed and compared. During the MD simulation time, the dynamic behavior of C-terminal tail in wild-type PTCR is also examined using essential dynamics analysis. The results of our simulations reveal that the binding conformation of 5α-DHT in C-terminal-deleted PTCR is more favorable for reduction reaction in PTCR, which shows strong agreement with kinetic data. These structural findings provide valuable information to understand substrate specificity of PTCR and further kinetic properties of enzymes belonging to the SDR superfamily.

In vitro analysis of RQC activities provides insights into the mechanism and function of CAT tailing

Science.gov (United States)

Osuna, Beatriz A; Howard, Conor J; KC, Subheksha; Frost, Adam; Weinberg, David E

2017-01-01

Ribosomes can stall during translation due to defects in the mRNA template or translation machinery, leading to the production of incomplete proteins. The Ribosome-associated Quality control Complex (RQC) engages stalled ribosomes and targets nascent polypeptides for proteasomal degradation. However, how each RQC component contributes to this process remains unclear. Here we demonstrate that key RQC activities—Ltn1p-dependent ubiquitination and Rqc2p-mediated Carboxy-terminal Alanine and Threonine (CAT) tail elongation—can be recapitulated in vitro with a yeast cell-free system. Using this approach, we determined that CAT tailing is mechanistically distinct from canonical translation, that Ltn1p-mediated ubiquitination depends on the poorly characterized RQC component Rqc1p, and that the process of CAT tailing enables robust ubiquitination of the nascent polypeptide. These findings establish a novel system to study the RQC and provide a framework for understanding how RQC factors coordinate their activities to facilitate clearance of incompletely synthesized proteins. DOI: http://dx.doi.org/10.7554/eLife.27949.001 PMID:28718767

Structural implications of the C-terminal tail in the catalytic and stability properties of manganese peroxidases from ligninolytic fungi

Energy Technology Data Exchange (ETDEWEB)

Fernández-Fueyo, Elena [CSIC, Ramiro de Maeztu 9, 28040 Madrid (Spain); Acebes, Sandra [Barcelona Supercomputing Center, Jordi Girona 29, 08034 Barcelona (Spain); Ruiz-Dueñas, Francisco J.; Martínez, María Jesús; Romero, Antonio; Medrano, Francisco Javier, E-mail: fjmedrano@cib.csic.es [CSIC, Ramiro de Maeztu 9, 28040 Madrid (Spain); Guallar, Victor, E-mail: fjmedrano@cib.csic.es [Barcelona Supercomputing Center, Jordi Girona 29, 08034 Barcelona (Spain); ICREA, Passeig Lluís Companys 23, 08010 Barcelona (Spain); Martínez, Angel T., E-mail: fjmedrano@cib.csic.es [CSIC, Ramiro de Maeztu 9, 28040 Madrid (Spain)

2014-12-01

The variable C-terminal tail of manganese peroxidases, a group of enzymes involved in lignin degradation, is implicated in their catalytic and stability properties, as shown by new crystal structures, molecular-simulation and directed-mutagenesis data. Based on this structural–functional evaluation, short and long/extralong manganese peroxidase subfamilies have been accepted; the latter are characterized by exceptional stability, while it is shown for the first time that the former are able to oxidize other substrates at the same site where manganese(II) is oxidized. The genome of Ceriporiopsis subvermispora includes 13 manganese peroxidase (MnP) genes representative of the three subfamilies described in ligninolytic fungi, which share an Mn{sup 2+}-oxidation site and have varying lengths of the C-terminal tail. Short, long and extralong MnPs were heterologously expressed and biochemically characterized, and the first structure of an extralong MnP was solved. Its C-terminal tail surrounds the haem-propionate access channel, contributing to Mn{sup 2+} oxidation by the internal propionate, but prevents the oxidation of 2, 2′-azino-bis(3-ethylbenzothiazoline-6-sulfonate) (ABTS), which is only oxidized by short MnPs and by shortened-tail variants from site-directed mutagenesis. The tail, which is anchored by numerous contacts, not only affects the catalytic properties of long/extralong MnPs but is also associated with their high acidic stability. Cd{sup 2+} binds at the Mn{sup 2+}-oxidation site and competitively inhibits oxidation of both Mn{sup 2+} and ABTS. Moreover, mutations blocking the haem-propionate channel prevent substrate oxidation. This agrees with molecular simulations that position ABTS at an electron-transfer distance from the haem propionates of an in silico shortened-tail form, while it cannot reach this position in the extralong MnP crystal structure. Only small differences exist between the long and the extralong MnPs, which do not justify their

Two distinct binding modes define the interaction of Brox with the C-terminal tails of CHMP5 and CHMP4B.

Science.gov (United States)

Mu, Ruiling; Dussupt, Vincent; Jiang, Jiansheng; Sette, Paola; Rudd, Victoria; Chuenchor, Watchalee; Bello, Nana F; Bouamr, Fadila; Xiao, Tsan Sam

2012-05-09

Interactions of the CHMP protein carboxyl terminal tails with effector proteins play important roles in retroviral budding, cytokinesis, and multivesicular body biogenesis. Here we demonstrate that hydrophobic residues at the CHMP4B C-terminal amphipathic α helix bind a concave surface of Brox, a mammalian paralog of Alix. Unexpectedly, CHMP5 was also found to bind Brox and specifically recruit endogenous Brox to detergent-resistant membrane fractions through its C-terminal 20 residues. Instead of an α helix, the CHMP5 C-terminal tail adopts a tandem β-hairpin structure that binds Brox at the same site as CHMP4B. Additional Brox:CHMP5 interface is furnished by a unique CHMP5 hydrophobic pocket engaging the Brox residue Y348 that is not conserved among the Bro1 domains. Our studies thus unveil a β-hairpin conformation of the CHMP5 protein C-terminal tail, and provide insights into the overlapping but distinct binding profiles of ESCRT-III and the Bro1 domain proteins. Copyright © 2012 Elsevier Ltd. All rights reserved.

Tail-extension following the termination codon is critical for release of the nascent chain from membrane-bound ribosomes in a reticulocyte lysate cell-free system.

Science.gov (United States)

Takahara, Michiyo; Sakaue, Haruka; Onishi, Yukiko; Yamagishi, Marifu; Kida, Yuichiro; Sakaguchi, Masao

2013-01-11

Nascent chain release from membrane-bound ribosomes by the termination codon was investigated using a cell-free translation system from rabbit supplemented with rough microsomal membrane vesicles. Chain release was extremely slow when mRNA ended with only the termination codon. Tail extension after the termination codon enhanced the release of the nascent chain. Release reached plateau levels with tail extension of 10 bases. This requirement was observed with all termination codons: TAA, TGA and TAG. Rapid release was also achieved by puromycin even in the absence of the extension. Efficient translation termination cannot be achieved in the presence of only a termination codon on the mRNA. Tail extension might be required for correct positioning of the termination codon in the ribosome and/or efficient recognition by release factors. Copyright © 2012. Published by Elsevier Inc.

Convenient one-step synthesis of 5-carboxy-seminaphthofluoresceins

DEFF Research Database (Denmark)

Hammershøj, Peter; Thyhaug, Erling; Harris, Pernille

2017-01-01

The one-step synthesis and characterization of a series of regioisomerically pure 5-carboxy-seminaphthofluoresceins (5-carboxy-SNAFLs) is reported. The optical properties were determined in aqueous buffer at around biological pH, and highly pH sensitive, large Stokes-shift fluorophores with emiss......The one-step synthesis and characterization of a series of regioisomerically pure 5-carboxy-seminaphthofluoresceins (5-carboxy-SNAFLs) is reported. The optical properties were determined in aqueous buffer at around biological pH, and highly pH sensitive, large Stokes-shift fluorophores...

Human adenovirus serotype 12 virion precursors pMu and pVI are cleaved at amino-terminal and carboxy-terminal sites that conform to the adenovirus 2 endoproteinase cleavage consensus sequence.

Science.gov (United States)

Freimuth, P; Anderson, C W

1993-03-01

The sequence of a 1158-base pair fragment of the human adenovirus serotype 12 (Ad12) genome was determined. This segment encodes the precursors for virion components Mu and VI. Both Ad12 precursors contain two sequences that conform to a consensus sequence motif for cleavage by the endoproteinase of adenovirus 2 (Ad2). Analysis of the amino terminus of VI and of the peptide fragments found in Ad12 virions demonstrated that these sites are cleaved during Ad12 maturation. This observation suggests that the recognition motif for adenovirus endoproteinases is highly conserved among human serotypes. The adenovirus 2 endoproteinase polypeptide requires additional co-factors for activity (C. W. Anderson, Protein Expression Purif., 1993, 4, 8-15). Synthetic Ad12 or Ad2 pVI carboxy-terminal peptides each permitted efficient cleavage of an artificial endoproteinase substrate by recombinant Ad2 endoproteinase polypeptide.

Crystallization of Galectin-8 Linker Reveals Intricate Relationship between the N-terminal Tail and the Linker

Directory of Open Access Journals (Sweden)

Yunlong Si

2016-12-01

Full Text Available Galectin-8 (Gal-8 plays a significant role in normal immunological function as well as in cancer. This lectin contains two carbohydrate recognition domains (CRD connected by a peptide linker. The N-terminal CRD determines ligand binding specificity, whereas the linker has been proposed to regulate overall Gal-8 function, including multimerization and biological activity. Here, we crystallized the Gal-8 N-terminal CRD with the peptide linker using a crystallization condition that contains Ni2+. The Ni2+ ion was found to be complexed between two CRDs via crystal packing contacts. The coordination between Ni2+ and Asp25 plays an indirect role in determining the structure of β-strand F0 and in influencing the linker conformation which could not be defined due to its dynamic nature. The linker was also shortened in situ and crystallized under a different condition, leading to a higher resolution structure refined to 1.08 Å. This crystal structure allowed definition of a short portion of the linker interacting with the Gal-8 N-terminal tail via ionic interactions and hydrogen bonds. Observation of two Gal-8 N-terminal CRD structures implies that the N-terminal tail and the linker may influence each other’s conformation. In addition, under specific crystallization conditions, glycerol could replace lactose and was observed at the carbohydrate binding site. However, glycerol did not show inhibition activity in hemagglutination assay.

The Ku80 carboxy terminus stimulates joining and artemis-mediated processing of DNA ends.

Science.gov (United States)

Weterings, Eric; Verkaik, Nicole S; Keijzers, Guido; Florea, Bogdan I; Wang, Shih-Ya; Ortega, Laura G; Uematsu, Naoya; Chen, David J; van Gent, Dik C

2009-03-01

Repair of DNA double-strand breaks (DSBs) is predominantly mediated by nonhomologous end joining (NHEJ) in mammalian cells. NHEJ requires binding of the Ku70-Ku80 heterodimer (Ku70/80) to the DNA ends and subsequent recruitment of the DNA-dependent protein kinase catalytic subunit (DNA-PK(CS)) and the XRCC4/ligase IV complex. Activation of the DNA-PK(CS) serine/threonine kinase requires an interaction with Ku70/80 and is essential for NHEJ-mediated DSB repair. In contrast to previous models, we found that the carboxy terminus of Ku80 is not absolutely required for the recruitment and activation of DNA-PK(CS) at DSBs, although cells that harbored a carboxy-terminal deletion in the Ku80 gene were sensitive to ionizing radiation and showed reduced end-joining capacity. More detailed analysis of this repair defect showed that DNA-PK(CS) autophosphorylation at Thr2647 was diminished, while Ser2056 was phosphorylated to normal levels. This resulted in severely reduced levels of Artemis nuclease activity in vivo and in vitro. We therefore conclude that the Ku80 carboxy terminus is important to support DNA-PK(CS) autophosphorylation at specific sites, which facilitates DNA end processing by the Artemis endonuclease and the subsequent joining reaction.

The Ku80 Carboxy Terminus Stimulates Joining and Artemis-Mediated Processing of DNA Ends▿

Science.gov (United States)

Weterings, Eric; Verkaik, Nicole S.; Keijzers, Guido; Florea, Bogdan I.; Wang, Shih-Ya; Ortega, Laura G.; Uematsu, Naoya; Chen, David J.; van Gent, Dik C.

2009-01-01

Repair of DNA double-strand breaks (DSBs) is predominantly mediated by nonhomologous end joining (NHEJ) in mammalian cells. NHEJ requires binding of the Ku70-Ku80 heterodimer (Ku70/80) to the DNA ends and subsequent recruitment of the DNA-dependent protein kinase catalytic subunit (DNA-PKCS) and the XRCC4/ligase IV complex. Activation of the DNA-PKCS serine/threonine kinase requires an interaction with Ku70/80 and is essential for NHEJ-mediated DSB repair. In contrast to previous models, we found that the carboxy terminus of Ku80 is not absolutely required for the recruitment and activation of DNA-PKCS at DSBs, although cells that harbored a carboxy-terminal deletion in the Ku80 gene were sensitive to ionizing radiation and showed reduced end-joining capacity. More detailed analysis of this repair defect showed that DNA-PKCS autophosphorylation at Thr2647 was diminished, while Ser2056 was phosphorylated to normal levels. This resulted in severely reduced levels of Artemis nuclease activity in vivo and in vitro. We therefore conclude that the Ku80 carboxy terminus is important to support DNA-PKCS autophosphorylation at specific sites, which facilitates DNA end processing by the Artemis endonuclease and the subsequent joining reaction. PMID:19103741

Hepatitis C virus NS4B carboxy terminal domain is a membrane binding domain

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Spaan Willy JM

2009-05-01

Full Text Available Abstract Background Hepatitis C virus (HCV induces membrane rearrangements during replication. All HCV proteins are associated to membranes, pointing out the importance of membranes for HCV. Non structural protein 4B (NS4B has been reported to induce cellular membrane alterations like the membranous web. Four transmembrane segments in the middle of the protein anchor NS4B to membranes. An amphipatic helix at the amino-terminus attaches to membranes as well. The carboxy-terminal domain (CTD of NS4B is highly conserved in Hepaciviruses, though its function remains unknown. Results A cytosolic localization is predicted for the NS4B-CTD. However, using membrane floatation assays and immunofluorescence, we now show targeting of the NS4B-CTD to membranes. Furthermore, a profile-profile search, with an HCV NS4B-CTD multiple sequence alignment, indicates sequence similarity to the membrane binding domain of prokaryotic D-lactate dehydrogenase (d-LDH. The crystal structure of E. coli d-LDH suggests that the region similar to NS4B-CTD is located in the membrane binding domain (MBD of d-LDH, implying analogy in membrane association. Targeting of d-LDH to membranes occurs via electrostatic interactions of positive residues on the outside of the protein with negative head groups of lipids. To verify that anchorage of d-LDH MBD and NS4B-CTD is analogous, NS4B-CTD mutants were designed to disrupt these electrostatic interactions. Membrane association was confirmed by swopping the membrane contacting helix of d-LDH with the corresponding domain of the 4B-CTD. Furthermore, the functionality of these residues was tested in the HCV replicon system. Conclusion Together these data show that NS4B-CTD is associated to membranes, similar to the prokaryotic d-LDH MBD, and is important for replication.

UV laser-induced histone-DNA crosslinking proceeds via the N-terminal tails

International Nuclear Information System (INIS)

Stefanovski, V.; Dimitrov, S.; Angelov, D.; Keskinova, E.; Pashev, I.

1990-01-01

The covalent crosslinking of histones to DNA by UV laser irradiation is accomplished solely via the N-terminal part of the molecule. Irradiated isolated calfthymus nuclei are treated with clostripain. The crosslinked protein-DNA complexes are isolated and the presence of each core histone analyzed by dot-immunoassay using antibodies, specific to the central globular domain of the respective histone. The reaction is negative for all core histones i.e. the globular domain is absent. It means that this domain has not been crosslinked to DNA and, once cleaved by clostripain, it has been stripped from DNA during the centrigugation in CsCl. This peculiar property of the crosslinked procedure makes it particularly useful in addressing some yet unanswered questions concerning histone-DNA interactions, such as the interaction of the N-terminal tails with linker DNA, the effect of the transient postsynthetic histone acetylation on its interaction with DNA, etc. These questions are now under study. 1 fig., 6 refs

Association of ubiquitin carboxy-terminal hydrolase-L1 in cerebrospinal fluid with clinical severity in a cohort of patients with Guillain-Barré syndrome.

Science.gov (United States)

Nagamine, Satoshi; Fujiwara, Yuuki; Shimizu, Toshio; Kawata, Akihiro; Wada, Keiji; Isozaki, Eiji; Kabuta, Tomohiro

2015-06-01

Guillain-Barré syndrome (GBS) is an acute immune-mediated polyneuropathy. Although its pathogenic mechanism has been revealed and various therapeutic trials have been performed, a proportion of patients experience the severe sequelae associated with GBS. In this paper, we investigated whether the amount of the neuron-specific protein, ubiquitin carboxy-terminal hydrolase-L1 (UCH-L1), in the cerebrospinal fluid of patients with GBS was correlated with the clinical course of the disease. UCH-L1 protein levels were greater in patients with GBS than in controls. The patients with GBS whose UCH-L1 protein levels were higher than those of the controls presented with more severe symptoms at peak. UCH-L1 protein levels tended to become elevated as the total protein levels were increased; however, elevated UCH-L1 without an increase in total protein might be correlated with severe disease course (bedridden or ventilator supported). These results suggest that UCH-L1 could be a biomarker associated with the severity of the disease at the acute phase of GBS.

Role of multiple phosphorylation sites in the COOH-terminal tail of aquaporin-2 for water transport: evidence against channel gating

DEFF Research Database (Denmark)

Moeller, Hanne B; Macaulay, Nanna; Knepper, Mark A

2009-01-01

demonstrated that lack of phosphorylation at S256, S261, S264, or S269 had no effect on AQP2 unit water transport. Similarly, no effect on AQP2 unit water transport was observed for the 264D and 269D forms, indicating that phosphorylation of the COOH-terminal tail of AQP2 is not involved in gating......Arginine vasopressin (AVP)-regulated phosphorylation of the water channel aquaporin-2 (AQP2) at serine 256 (S256) is essential for its accumulation in the apical plasma membrane of collecting duct principal cells. In this study, we examined the role of additional AVP-regulated phosphorylation sites...... in the COOH-terminal tail of AQP2 on protein function. When expressed in Xenopus laevis oocytes, prevention of AQP2 phosphorylation at S256A (S256A-AQP2) reduced osmotic water permeability threefold compared with wild-type (WT) AQP2-injected oocytes. In contrast, prevention of AQP2 single phosphorylation at S...

Uncovering the role of the flexible C-terminal tail: A model study with Strep-tagged GFP.

Science.gov (United States)

Lassalle, Michael W; Kondou, Shinobu

2016-06-01

Recently, it has been recognized that, much like an electric current in an electric circuit, dynamic disruptions from flexible, unstructured regions distal to the active region are transferred through the contact network to the active site and influence protein stability and/or function. As transmembrane proteins frequently possess the β-barrel structure, studies of proteins with this topology are required. The unstructured lid segments of the β-barrel GFP protein are conserved and could play a role in the backbone stabilization required for chromophore function. A study of the disordered C-terminus and the function within the lid is necessary. In this study, we entirely truncated the flexible C-terminal tail and investigated the N-terminal Strep-tagged GFP by fluorescence spectroscopy, and the temperature- and GdnHCl-induced unfolding by circular dichroism. The introduction of the unstructured Strep-tag itself changed the unfolding pathway. Truncating the entire flexible tail did not decrease the fluorescence intensity to a large extent; however, the protein stability changed dramatically. The temperature for half-denaturation T 1/2 changed significantly from 79 °C for the wild-type to 72.8 °C for the mutant. Unfolding kinetics at different temperatures have been induced by 4 M GdnHCl, and the apparent Arrhenius activation energy decreased by 40% as compared to the wild-type.

Uncovering the role of the flexible C-terminal tail: A model study with Strep-tagged GFP

Directory of Open Access Journals (Sweden)

Michael W. Lassalle

2016-06-01

Full Text Available Recently, it has been recognized that, much like an electric current in an electric circuit, dynamic disruptions from flexible, unstructured regions distal to the active region are transferred through the contact network to the active site and influence protein stability and/or function. As transmembrane proteins frequently possess the β-barrel structure, studies of proteins with this topology are required. The unstructured lid segments of the β-barrel GFP protein are conserved and could play a role in the backbone stabilization required for chromophore function. A study of the disordered C-terminus and the function within the lid is necessary. In this study, we entirely truncated the flexible C-terminal tail and investigated the N-terminal Strep-tagged GFP by fluorescence spectroscopy, and the temperature- and GdnHCl-induced unfolding by circular dichroism. The introduction of the unstructured Strep-tag itself changed the unfolding pathway. Truncating the entire flexible tail did not decrease the fluorescence intensity to a large extent; however, the protein stability changed dramatically. The temperature for half-denaturation T1/2 changed significantly from 79 °C for the wild-type to 72.8 °C for the mutant. Unfolding kinetics at different temperatures have been induced by 4 M GdnHCl, and the apparent Arrhenius activation energy decreased by 40% as compared to the wild-type.

Multiple C-terminal tail Ca(2+)/CaMs regulate Ca(V)1.2 function but do not mediate channel dimerization.

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Kim, Eun Young; Rumpf, Christine H; Van Petegem, Filip; Arant, Ryan J; Findeisen, Felix; Cooley, Elizabeth S; Isacoff, Ehud Y; Minor, Daniel L

2010-12-01

Interactions between voltage-gated calcium channels (Ca(V)s) and calmodulin (CaM) modulate Ca(V) function. In this study, we report the structure of a Ca(2+)/CaM Ca(V)1.2 C-terminal tail complex that contains two PreIQ helices bridged by two Ca(2+)/CaMs and two Ca(2+)/CaM-IQ domain complexes. Sedimentation equilibrium experiments establish that the complex has a 2:1 Ca(2+)/CaM:C-terminal tail stoichiometry and does not form higher order assemblies. Moreover, subunit-counting experiments demonstrate that in live cell membranes Ca(V)1.2s are monomers. Thus, contrary to previous proposals, the crystallographic dimer lacks physiological relevance. Isothermal titration calorimetry and biochemical experiments show that the two Ca(2+)/CaMs in the complex have different properties. Ca(2+)/CaM bound to the PreIQ C-region is labile, whereas Ca(2+)/CaM bound to the IQ domain is not. Furthermore, neither of lobes of apo-CaM interacts strongly with the PreIQ domain. Electrophysiological studies indicate that the PreIQ C-region has a role in calcium-dependent facilitation. Together, the data show that two Ca(2+)/CaMs can bind the Ca(V)1.2 tail simultaneously and indicate a functional role for Ca(2+)/CaM at the C-region site.

Preparation and reactivity of carboxylic acid-terminated boron-doped diamond electrodes

International Nuclear Information System (INIS)

Niedziolka-Joensson, Joanna; Boland, Susan; Leech, Donal; Boukherroub, Rabah; Szunerits, Sabine

2010-01-01

The paper reports on the formation of carboxy-terminated boron-doped diamond (BDD) electrodes. The carboxylic acid termination was prepared in a controlled way by reacting photochemically oxidized BDD with succinic anhydride. The resulting interface was readily employed for the linking of an amine-terminated ligand such as an osmium complex bearing an amine terminal group. The interfaces were characterized using X-ray photoelectron spectroscopy (XPS) and cyclic voltammetry (CV). Contact angle measurements were used to follow the changes in surface wetting properties due to surface functionalization. The chemical reactivity of the carboxyl-terminated BDD was investigated by covalent coupling of the acid groups to an amine-terminated osmium complex.

Molecular dynamics simulation study on the phase behavior of the Gay-Berne model with a terminal dipole and a flexible tail

International Nuclear Information System (INIS)

Fukunaga, Hiroo; Takimoto, Jun-ichi; Doi, Masao

2004-01-01

To study the effect of the alkyl tail and the terminal dipole on the stability of the liquid crystalline phase of mesogens, we have carried out molecular dynamics simulations for 1CB(4-methyl-4 ' -cyanobiphenyl) and 5CB(4-n-pentyl-4 ' -cyanobiphenyl) by using a coarse-grained model. In the coarse-grained model, a 5CB molecule is divided into the rigid part of 1CB moiety, which is represented by an ellipsoid, and the remaining flexible part which is represented by a chain of united atoms. The nonbonded potential between coarse-grained segments is represented by the generalized Gay-Berne (GB) potential and the potential parameters are determined by directly comparing the GB potential with the atomistic potentials averaged over the rotation of the mesogen around its axis. In addition, a dipole moment is placed at one end of the ellipsoid opposite to the flexible tail. The ordered state obtained in the polar 5CB model was assigned as the nematic phase, and the experimental static and dynamical properties were reproduced well by using this coarse-grained model. Both the dipole-dipole interactions and the thermal fluctuation of the flexible tail increase the positional disorder in the director direction, and stabilize the nematic phase. Thus, the nematic phase in the polar 5CB is induced by a cooperative effect of the flexible tail and the terminal dipole. It is noted that a local bilayer structure with head-to-head association is formed in the nematic phase, as experimentally observed by x-ray diffraction measurements

Radioimmunoassays of parathyroid hormone: Clinical value of the midregion and c-terminal assay

International Nuclear Information System (INIS)

Hengst, K.; Raidt, H.; Hoegemann, B.; Wagner, H.

1984-01-01

PTH was measured by midregion and carboxy-terminal assay in 20 patients suffering from primary hyperparathyroidism, 30 patients with secondary hyperparathyroidism, 10 persons with tertiary hyperparathyroidism, 50 patients who underwent transplantation of the kidney, 10 patients with hypoparathyroidism and 10 patients with other hypocalcemia as well as in 50 normal persons. Diagnosing hyperparathyroidism both assays were successful, when serum kreatinine was within the normal range. Especially midregion fragments became elevated, when serum kreatinine was above 2,0 mg. During renal failure diagnosis of hyperparathyroidism and hypoparathyroidism is more difficult. In normal renal function, however, the midregion assay is more sensitive for diagnosis of hypoparathyroidism compared to the carboxy-terminal assay. After kidney transplantation midregion levels of PTH are elevated, perhaps because of a failure of the transplanted kidney to eliminate the midregion fragment. (orig.) [de

Rapid elimination of Carboxy-THC in a cohort of chronic cannabis users.

Science.gov (United States)

Lewis, John; Molnar, Anna; Allsop, David; Copeland, Jan; Fu, Shanlin

2016-01-01

Urinary 11-nor-Δ(9)-tetrahydrocannabinol-9-carboxylic acid (Carboxy-THC) concentrations, normalised to creatinine output, have been demonstrated to be a useful tool in the interpretation of the results of a series of urine tests for cannabis. These tests, often termed historical data, can be used to identify potential chronic cannabis users who may present occupational health and safety risks within the workplace. Conversely, the data can also be used to support employee claims of previous regular, rather than recent, cannabis use. This study aimed at examining the mean elimination of Carboxy-THC in 37 chronic users undergoing voluntary abstinence over a 2-week period. Urine specimens were collected prior to the study and after 1 and 2 weeks of abstinence. Carboxy-THC levels in urine were measured by gas chromatography-mass spectrometry (GC-MS) following alkaline hydrolysis, organic solvent extraction and derivatisation to form its pentafluoropropionic derivative. The creatinine-normalised Carboxy-THC concentrations declined rapidly over the 2 weeks of abstinence period and the majority of chronic cannabis users (73%) reduced their urinary Carboxy-THC levels to below the 15-μg/L confirmatory cutoff within that time. The study further highlights the value of historical urinary Carboxy-THC data as a means of identifying potential occupational health and safety risks among chronic cannabis users.

Assembly of Ebola virus matrix protein VP40 is regulated by latch-like properties of N and C terminal tails.

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Leslie P Silva

Full Text Available The matrix protein VP40 coordinates numerous functions in the viral life cycle of the Ebola virus. These range from the regulation of viral transcription to morphogenesis, packaging and budding of mature virions. Similar to the matrix proteins of other nonsegmented, negative-strand RNA viruses, VP40 proceeds through intermediate states of assembly (e.g. octamers but it remains unclear how these intermediates are coordinated with the various stages of the life cycle. In this study, we investigate the molecular basis of synchronization as governed by VP40. Hydrogen/deuterium exchange mass spectrometry was used to follow induced structural and conformational changes in VP40. Together with computational modeling, we demonstrate that both extreme N and C terminal tail regions stabilize the monomeric state through a direct association. The tails appear to function as a latch, released upon a specific molecular trigger such as RNA ligation. We propose that triggered release of the tails permits the coordination of late-stage events in the viral life cycle, at the inner membrane of the host cell. Specifically, N-tail release exposes the L-domain motifs PTAP/PPEY to the transport and budding complexes, whereas triggered C-tail release could improve association with the site of budding.

The N-terminal tail of hERG contains an amphipathic α-helix that regulates channel deactivation.

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Chai Ann Ng

Full Text Available The cytoplasmic N-terminal domain of the human ether-a-go-go related gene (hERG K+ channel is critical for the slow deactivation kinetics of the channel. However, the mechanism(s by which the N-terminal domain regulates deactivation remains to be determined. Here we show that the solution NMR structure of the N-terminal 135 residues of hERG contains a previously described Per-Arnt-Sim (PAS domain (residues 26-135 as well as an amphipathic α-helix (residues 13-23 and an initial unstructured segment (residues 2-9. Deletion of residues 2-25, only the unstructured segment (residues 2-9 or replacement of the α-helix with a flexible linker all result in enhanced rates of deactivation. Thus, both the initial flexible segment and the α-helix are required but neither is sufficient to confer slow deactivation kinetics. Alanine scanning mutagenesis identified R5 and G6 in the initial flexible segment as critical for slow deactivation. Alanine mutants in the helical region had less dramatic phenotypes. We propose that the PAS domain is bound close to the central core of the channel and that the N-terminal α-helix ensures that the flexible tail is correctly orientated for interaction with the activation gating machinery to stabilize the open state of the channel.

C-terminal region of MAP7 domain containing protein 3 (MAP7D3 promotes microtubule polymerization by binding at the C-terminal tail of tubulin.

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Saroj Yadav

Full Text Available MAP7 domain containing protein 3 (MAP7D3, a newly identified microtubule associated protein, has been shown to promote microtubule assembly and stability. Its microtubule binding region has been reported to consist of two coiled coil motifs located at the N-terminus. It possesses a MAP7 domain near the C-terminus and belongs to the microtubule associated protein 7 (MAP7 family. The MAP7 domain of MAP7 protein has been shown to bind to kinesin-1; however, the role of MAP7 domain in MAP7D3 remains unknown. Based on the bioinformatics analysis of MAP7D3, we hypothesized that the MAP7 domain of MAP7D3 may have microtubule binding activity. Indeed, we found that MAP7 domain of MAP7D3 bound to microtubules as well as enhanced the assembly of microtubules in vitro. Interestingly, a longer fragment MDCT that contained the MAP7 domain (MD with the C-terminal tail (CT of the protein promoted microtubule polymerization to a greater extent than MD and CT individually. MDCT stabilized microtubules against dilution induced disassembly. MDCT bound to reconstituted microtubules with an apparent dissociation constant of 3.0 ± 0.5 µM. An immunostaining experiment showed that MDCT localized along the length of the preassembled microtubules. Competition experiments with tau indicated that MDCT shares its binding site on microtubules with tau. Further, we present evidence indicating that MDCT binds to the C-terminal tail of tubulin. In addition, MDCT could bind to tubulin in HeLa cell extract. Here, we report a microtubule binding region in the C-terminal region of MAP7D3 that may have a role in regulating microtubule assembly dynamics.

Global gene expression analysis of fission yeast mutants impaired in Ser-2 phosphorylation of the RNA pol II carboxy terminal domain.

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Reza Saberianfar

Full Text Available In Schizosaccharomyces pombe the nuclear-localized Lsk1p-Lsc1p cyclin dependent kinase complex promotes Ser-2 phosphorylation of the heptad repeats found within the RNA pol II carboxy terminal domain (CTD. Here, we first provide evidence supporting the existence of a third previously uncharacterized Ser-2 CTD kinase subunit, Lsg1p. As expected for a component of the complex, Lsg1p localizes to the nucleus, promotes Ser-2 phosphorylation of the CTD, and physically interacts with both Lsk1p and Lsc1p in vivo. Interestingly, we also demonstrate that lsg1Δ mutants--just like lsk1Δ and lsc1Δ strains--are compromised in their ability to faithfully and reliably complete cytokinesis. Next, to address whether kinase mediated alterations in CTD phosphorylation might selectively alter the expression of genes with roles in cytokinesis and/or the cytoskeleton, global gene expression profiles were analyzed. Mutants impaired in Ser-2 phosphorylation display little change with respect to the level of transcription of most genes. However, genes affecting cytokinesis--including the actin interacting protein gene, aip1--as well as genes with roles in meiosis, are included in a small subset that are differentially regulated. Significantly, genetic analysis of lsk1Δ aip1Δ double mutants is consistent with Lsk1p and Aip1p acting in a linear pathway with respect to the regulation of cytokinesis.

Synergistic and independent actions of multiple terminal nucleotidyl transferases in the 3' tailing of small RNAs in Arabidopsis.

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Xiaoyan Wang

2015-04-01

Full Text Available All types of small RNAs in plants, piwi-interacting RNAs (piRNAs in animals and a subset of siRNAs in Drosophila and C. elegans are subject to HEN1 mediated 3' terminal 2'-O-methylation. This modification plays a pivotal role in protecting small RNAs from 3' uridylation, trimming and degradation. In Arabidopsis, HESO1 is a major enzyme that uridylates small RNAs to trigger their degradation. However, U-tail is still present in null hen1 heso1 mutants, suggesting the existence of (an enzymatic activities redundant with HESO1. Here, we report that UTP: RNA uridylyltransferase (URT1 is a functional paralog of HESO1. URT1 interacts with AGO1 and plays a predominant role in miRNA uridylation when HESO1 is absent. Uridylation of miRNA is globally abolished in a hen1 heso1 urt1 triple mutant, accompanied by an extensive increase of 3'-to-5' trimming. In contrast, disruption of URT1 appears not to affect the heterochromatic siRNA uridylation. This indicates the involvement of additional nucleotidyl transferases in the siRNA pathway. Analysis of miRNA tailings in the hen1 heso1 urt1 triple mutant also reveals the existence of previously unknown enzymatic activities that can add non-uridine nucleotides. Importantly, we show HESO1 may also act redundantly with URT1 in miRNA uridylation when HEN1 is fully competent. Taken together, our data not only reveal a synergistic action of HESO1 and URT1 in the 3' uridylation of miRNAs, but also independent activities of multiple terminal nucleotidyl transferases in the 3' tailing of small RNAs and an antagonistic relationship between uridylation and trimming. Our results may provide further insight into the mechanisms of small RNA 3' end modification and stability control.

Characterization of carboxy methylcellulose doped with DTAB as ...

Indian Academy of Sciences (India)

Characterization of carboxy methylcellulose doped with DTAB as new types of biopolymer electrolytes ... (CMC) is creating opportunity for new types of electrochemical devices, which may themselves, ... Bulletin of Materials Science | News.

Phosphorylated peptides occur in a non-helical portion of the tail of a catch muscle myosin

International Nuclear Information System (INIS)

Castellani, L.; Elliott, B.W. Jr.; Cohen, C.

1987-01-01

Myosin from a molluscan catch muscle (the Anterior Byssus Retractor (ABRM) of Mytilus edulis) is unusual in being phosphorylated in the rod by an endogenous heavy-chain kinase. This phosphorylation enhances myosin solubility at low ionic strength and induces molecular folding of the myosin tail. Papain and chymotryptic cleavage of this myosin, phosphorylated with [γ- 32 P]ATP, indicates that the phosphorylated residues are associated with the carboxy-terminal end of the light meromyosin. Ion-exchange and reverse-phase HPLC of radiolabeled chymotryptic peptides allow the isolation of two different peptides with high specific activity. One of these peptides is rich in lysine and arginine residues, a finding consistent with the observation that basic residues often determine the substrate specificity of protein kinases. The second peptide contains proline residues. Taken together, these results suggest that, as in the case of Acanthamoeba myosin, phosphorylation occurs in a nonhelical portion of the rod that may also control solubility. Identification of the residues that are phosphorylated and their location in the rod may reveal how the phosphorylation-dependent changes observed in the myosin in vitro are related to changes in intermolecular interactions in the thick filaments in vivo

The C-terminal tail of CRTH2 is a key molecular determinant that constrains GalphaI- and downstream-signaling cascade activation

DEFF Research Database (Denmark)

Schroeder, Ralf; Merten, Nicole; Mathiesen, Jesper Mosolff

2009-01-01

Prostaglandin D(2) activation of the seven transmembrane receptor CRTH2 regulates numerous cell functions that are important in inflammatory diseases such as asthma. Despite its disease implication, no studies to date aimed at identifying receptor domains governing signaling and surface expression......2 at the plasma membrane, presence of this domain confers a signaling-compromised conformation onto the receptor. Indeed, a mutant receptor lacking the major portion of its C-terminal tail displays paradoxically enhanced Galphai and ERK1/2 activation in spite of enhanced constitutive and agonist......-mediated internalization. Enhanced activation of Galphai proteins and downstream signaling cascades is likely due to the inability of the tail-truncated receptor to recruit beta-arrestin2 and undergo homologous desensitization. Unexpectedly, CRTH2 is not phosphorylated upon agonist-stimulation, a primary mechanism...

Study on selective separation of uranium(VI) by new N,N-dialkyl carboxy-amides

International Nuclear Information System (INIS)

Suzuki, Shinichi; Sugo, Yumi; Kimura, Takaumi; Yaita, Tsuyoshi

2007-01-01

The Feasibility study (FS) on commercialized FR cycle systems has been carried out in Japan. In this Feasibility study, 'Advanced Aqueous' reprocessing was designed as a new reprocessing concept to enhance nuclear non-proliferation by recycling U, Pu and minor actinides (MA) with some fission products (FP). The crystallization and U(VI)/TRU(transuranics) co-extraction technique have been selected as candidate technique in the 'Advanced Aqueous' reprocessing. In JAEA, the result of Feasibility study was received and Fast Reactor Cycle Technology Development Project (FaCT) was started. In the nuclear spent fuel reprocessing, FBR spent fuels will coexist with LWR spent fuels for several decades until FBR cycle begins to operate. For the treatment of LWR spent fuels, high decontamination factor for FP was required for U(VI) storage, and solvent extraction technique was selected in the nuclear fuel treatment. In our laboratory, N,N-di-alkyl carboxy-amides have been developed as extractant based on solvent extraction technique for one of a back-up technology of 'Advanced Aqueous' reprocessing in FBR spent fuel treatments. N,N-di-alkyl carboxy-amides were noted as one of the alternative extractant of tri-butylphosphate (TBP) in the field of nuclear fuel reprocessing. Extraction behavior of U(VI) and Pu(IV) with N,N-di-alkyl carboxy-amides was almost similar to those with TBP. N,N-di-alkyl carboxy-amides have some advantages, namely, their complete incinerability (CHON principle) and high stability for hydrolysis and radiolysis. Their main degradation products are carboxylic acids and secondary amines which hardly affect the separation of U(VI) and Pu(IV) from fission products. Further, the synthesis of N,N-di-alkyl carboxy-amides was relatively easy with reaction of carboxylic chloride and secondary amine. The main purpose of this solvent extraction technique using N,N-di-alkyl carboxy-amides is selective separation of Uranium(VI) with branched N,N-di-alkyl carboxy

Histone H2A mobility is regulated by its tails and acetylation of core histone tails

International Nuclear Information System (INIS)

Higashi, Tsunehito; Matsunaga, Sachihiro; Isobe, Keisuke; Morimoto, Akihiro; Shimada, Tomoko; Kataoka, Shogo; Watanabe, Wataru; Uchiyama, Susumu; Itoh, Kazuyoshi; Fukui, Kiichi

2007-01-01

Histone tail domains play important roles in cellular processes, such as replication, transcription, and chromosome condensation. Histone H2A has one central and two tail domains, and their functions have mainly been studied from a biochemical perspective. In addition, analyses based on visualization have been employed for functional analysis of some chromatin proteins. In this study, we analyzed histone H2A mobility in vivo by two-photon FRAP, and elucidated that the histone H2A N- and C-terminal tails regulate its mobility. We found that histone H2A mobility was increased following treatment of host cells with a histone deacetylase inhibitor. Our results support a model in which core histone tails directly regulate transcription by interacting with nucleosome DNA via electrostatic interactions

Safety and Efficacy of Intravenous Ferric Carboxy Maltose in Iron Deficiency Anaemia During Post-partum Period.

Science.gov (United States)

Mishra, Vineet; Roy, Priyankar; Gandhi, Khushali; Choudhary, Sumesh; Aggarwal, Rohina; Sokabaj, Shaheen

2018-01-01

Iron deficiency is the commonest treatable cause of postpartum anaemia. Parenteral iron therapy results in faster and higher replenishment of iron stores and correction of haemoglobin levels with better compliance. Ferric Carboxy Maltose is an effective and a safe option which can be administered intravenously in single total correction dose without any serious adverse effects.The study was done to evaluate the efficacy and safety of Ferric Carboxy Maltose in the treatment of iron deficiency anaemia in post-natal patients. It was an open, single arm study including 615 women with diagnosis of Iron deficiency anaemia and haemoglobin (Hb) levels between 4gm% and 11gm% from January 2013 to December 2016. Intravenous Ferric Carboxy Maltose(500-1500mg) was administered and the improvement in haemoglobin levels and iron stores were assessed after three weeks of total dose infusion. Out of the 615 women, 595 women were included in the analysis. Most of the women were in the age group of 27-30 years. Most of the women had mild anaemia as per World Health Organisation guidelines. Mean hemoglobin levels significantly increased over a period of three weeks after Ferric Carboxy Maltose administration. Other parameters like total iron binding capacity, Ferritin and Iron also had a significant improvement after Ferric Carboxy Maltose administration. No serious adverse events were observed after Ferric Carboxy Maltose. Intravenous Ferric Carboxy Maltose was an effective and a safe treatment option for iron deficiency anaemia and has an advantage of single administration of high doses without serious adverse effects.

Synthesis of carboxy-labelled 1-carnitine

International Nuclear Information System (INIS)

Goodfellow, D.B.; Hoppel, C.L.; Turkaly, J.S.

1982-01-01

A method for the production of carboxy-labelled l-carnitine is described. The first step is the chemical synthesis of 4-N-trimethylammoniobutanoate (butyrobetaine) from the precursors 4-aminobutanoate and iodomethane. The second step involves the hydroxylation of butyrobetaine to form l-carnitine using butyrobetaine hydroxylase partially purified from bovine calf liver. The method also can be used to synthesize Me-labelled and uniformly-chain-labelled l-carnitine. (author)

Voltage-sensing domain mode shift is coupled to the activation gate by the N-terminal tail of hERG channels.

Science.gov (United States)

Tan, Peter S; Perry, Matthew D; Ng, Chai Ann; Vandenberg, Jamie I; Hill, Adam P

2012-09-01

Human ether-a-go-go-related gene (hERG) potassium channels exhibit unique gating kinetics characterized by unusually slow activation and deactivation. The N terminus of the channel, which contains an amphipathic helix and an unstructured tail, has been shown to be involved in regulation of this slow deactivation. However, the mechanism of how this occurs and the connection between voltage-sensing domain (VSD) return and closing of the gate are unclear. To examine this relationship, we have used voltage-clamp fluorometry to simultaneously measure VSD motion and gate closure in N-terminally truncated constructs. We report that mode shifting of the hERG VSD results in a corresponding shift in the voltage-dependent equilibrium of channel closing and that at negative potentials, coupling of the mode-shifted VSD to the gate defines the rate of channel closure. Deletion of the first 25 aa from the N terminus of hERG does not alter mode shifting of the VSD but uncouples the shift from closure of the cytoplasmic gate. Based on these observations, we propose the N-terminal tail as an adaptor that couples voltage sensor return to gate closure to define slow deactivation gating in hERG channels. Furthermore, because the mode shift occurs on a time scale relevant to the cardiac action potential, we suggest a physiological role for this phenomenon in maximizing current flow through hERG channels during repolarization.

Functional interactions of the AF-2 activation domain core region of the human androgen receptor with the amino-terminal domain and with the transcriptional coactivator TIF2 (transcriptional intermediary factor2)

NARCIS (Netherlands)

C.A. Berrevoets (Cor); P. Doesburg (Paul); K. Steketee (Karine); J. Trapman (Jan); A.O. Brinkmann (Albert)

1998-01-01

textabstractPrevious studies in yeast and mammalian cells showed a functional interaction between the amino-terminal domain and the carboxy-terminal, ligand-binding domain (LBD) of the human androgen receptor (AR). In the present study, the AR subdomains involved in

Calamitic Smectic A-Polar Smectic APA Transition Observed in Bent Molecules with Large Bent-Angle Central Core of 4,6-Dichlorobenzene and Alkylthio Terminal Tail

Science.gov (United States)

Nguyen, Ha; Kang, Sungmin; Tokita, Masatoshi; Watanabe, Junji

2011-07-01

New homologs of bent molecules with a large bent-angle central core of 4,6-dichloro benzene and an alkylthio terminal tail have been synthesized. Although the corresponding alkoxy-tail homologs show only the calamitic phases because of its large bent angles around 160°, the new homologs with an alkylthio tail exhibit the antiferroelectric smectic APA (SmAPA) banana phase that is transformed on cooling from the calamitic smectic A (SmA) phase. The biaxial polar packing of bent molecules in the SmAPA phase is considered to arise from the hindered rotation around the molecular long axis due to the expansion of the mesophase temperatures to a lower temperature region. This study indicates that the bent molecules, even with a large bent angle, have the potential to form a switchable banana phase with a remarkable decrease in its phase temperature range to around 60 °C.

The measles virus N(TAIL)-XD complex: an illustrative example of fuzziness.

Science.gov (United States)

Longhi, Sonia

2012-01-01

In this chapter, I focus on the biochemical and structural characterization of the complex between the intrinsically disordered C-terminal domain of the measles virus nucleoprotein (N(TAIL)) and the C-terminal X domain (XD) of the viral phosphoprotein (P). I summarize the main experimental data available so far pointing out the prevalently disordered nature of N(TAIL) even after complex formation and the role of the flexible C-terminal appendage in the binding reaction. I finally discuss the possible functional role of these residual disordered regions within the complex in terms of their ability to capture other regulatory, binding partners.

Picosecond transient absorption study of photodissociated carboxy hemoglobin and myoglobin

International Nuclear Information System (INIS)

Janes, S.M.; Dalickas, G.A.; Eaton, W.A.; Hochstrasser, R.M.

1988-01-01

The optical transient absorption spectra at 30 ps and 6.5 ns after photolysis are compared for both carboxy hemoglobin (HbCO) and carboxy myoglobin (MbCO). Both 355- and 532-nm excitation pulses were used. In all cases the shapes of the optical difference spectra thus generated are stationary over the complete time-scale studied. The photolysis spectra for MbCO are not significantly different from the equilibrium difference spectra generated on the same picosecond spectrometer when measured to an accuracy of +/- 0.5 nm. In addition, spectral parameters for delegated HbCO generated on the same spectrometer but detected by two different techniques, either by a Vidicon detector or point by point with photomultiplier tubes, are reported; the results are different from some of the previously reported picosecond experiments

The host-binding domain of the P2 phage tail spike reveals a trimeric iron-binding structure

International Nuclear Information System (INIS)

Yamashita, Eiki; Nakagawa, Atsushi; Takahashi, Junichi; Tsunoda, Kin-ichi; Yamada, Seiko; Takeda, Shigeki

2011-01-01

The C-terminal domain of a bacteriophage P2 tail-spike protein, gpV, was crystallized and its structure was solved at 1.27 Å resolution. The refined model showed a triple β-helix structure and the presence of iron, calcium and chloride ions. The adsorption and infection of bacteriophage P2 is mediated by tail fibres and tail spikes. The tail spikes on the tail baseplate are used to irreversibly adsorb to the host cells. Recently, a P2 phage tail-spike protein, gpV, was purified and it was shown that a C-terminal domain, Ser87–Leu211, is sufficient for the binding of gpV to host Escherichia coli membranes [Kageyama et al. (2009 ▶), Biochemistry, 48, 10129–10135]. In this paper, the crystal structure of the C-terminal domain of P2 gpV is reported. The structure is a triangular pyramid and looks like a spearhead composed of an intertwined β-sheet, a triple β-helix and a metal-binding region containing iron, calcium and chloride ions

The Energetics of Streptococcal Enolase Octamer Formation: The Quantitative Contributions of the Last Eight Amino Acids at the Carboxy-Terminus.

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Jack A Kornblatt

Full Text Available The enolase produced by Streptococcus pyogenes is a homo-octamer whose overall shape resembles that of a donut. The octamer is best described as a tetramer of dimers. As such, it contains two types of interfaces. The first is common to almost all enolases as most enolases that have been studied are dimers. The second is unique to the octamers and includes residues near the carboxy-terminus. The primary sequence of the enolase contains 435 residues with an added 19 as an N-terminal hexahistine tag. We have systematically truncated the carboxy-terminus, individually removing the first 8 residues. This gave rise to a series of eight structures containing respectively, 435, 434, 433, 432, 431, 430, 429 and 427 residues. The truncations cause the protein to gradually dissociate from octamers to enzymatically inactive monomers with very small amounts of intermediate tetramers and dimers. We have evaluated the contributions of the missing residues to the monomer/octamer equilibrium using a combination of analytical ultracentrifugation and activity assays. For the dissociation reaction, octamer 8 monomer truncation of all eight C-terminal residues resulted in a diminution in the standard Gibbs energy of dissociation of about 59 kJ/mole of octamer relative to the full length protein. Considering that this change is spread over eight subunits, this translates to a change in standard Gibbs interaction energy of less than 8 kJ/mole of monomer distributed over the eight monomers. The resulting proteins, containing 434, 433, 432, 431, 430, 429 and 427 residues per monomer, showed intermediate free energies of dissociation. Finally, three other mutations were introduced into our reference protein to establish how they influenced the equilibrium. The main importance of this work is it shows that for homo-multimeric proteins a small change in the standard Gibbs interaction energy between subunits can have major physiological effects.

A triclinic crystal structure of the carboxy-terminal domain of HIV-1 capsid protein with four molecules in the asymmetric unit reveals a novel packing interface

International Nuclear Information System (INIS)

Lampel, Ayala; Yaniv, Oren; Berger, Or; Bacharach, Eran; Gazit, Ehud; Frolow, Felix

2013-01-01

The triclinic structure of the HIV-1 capsid protein contains four molecules in the asymmetric unit that form a novel packing interface that could conceivably resemble an intermediate structure that is involved in the early steps of HIV-1 assembly. The Gag precursor is the major structural protein of the virion of human immunodeficiency virus-1 (HIV-1). Capsid protein (CA), a cleavage product of Gag, plays an essential role in virus assembly both in Gag-precursor multimerization and in capsid core formation. The carboxy-terminal domain (CTD) of CA contains 20 residues that are highly conserved across retroviruses and constitute the major homology region (MHR). Genetic evidence implies a role for the MHR in interactions between Gag precursors during the assembly of the virus, but the structural basis for this role remains elusive. This paper describes a novel triclinic structure of the HIV-1 CA CTD at 1.6 Å resolution with two canonical dimers of CA CTD in the asymmetric unit. The canonical dimers form a newly identified packing interface where interactions of four conserved MHR residues take place. This is the first structural indication that these MHR residues participate in the putative CTD–CTD interactions. These findings suggest that the molecules forming this novel interface resemble an intermediate structure that participates in the early steps of HIV-1 assembly. This interface may therefore provide a novel target for antiviral drugs

Structure of antigenetic determinants in the amino-terminal region of bovine fibrinogen Aα chain

International Nuclear Information System (INIS)

Tanswell, P.; Reiter, H.; Timpl, R.

1978-01-01

A radioimmunoassay was developed for peptide F-CB1α from the amino of bovine fibrinogen Aα chain, isolated after reduction and carboxymethylation of the multichain disulfide-linked cyanogen bromide peptide F-CB1. Seven out of twelve different rabbit antisera produced against fibrinogen, peptide F-CB1 or Aα chain showed distinct binding to 125 I-labelled F-CB1α. Thrombin cleavage of F-CB1α yielded two fragments: fibrinopeptide A (residues 1-19) and the carboxy-terminal fragment Th2 (residues 20-54). Antisera could be classified into three groups according to whether they recognized antigenic determinants on fibrinopeptide A, on peptide Th2 or as they showed diminished reactions with both fragments. Only little or no cross-reaction was observed with the amino-terminal cyanogen bromide peptides of Bβ and γ chain. Proteolytic fragments of fibrinopeptide A were isolated and tested for inhibitory activity with two antisera. One antiserum contained anitbodies binding selectively to the amino-terminal sequence (residues 4-11) and did not cross-react with human fibrinopeptide A. Another antiserum showed a specific binding restricted to the carboxy-terminal sequence (residues 11-18) and cross-reacted completely with human fibrinopeptide A. These results correlate well with the primary structures of the two fibrinopeptides. The antigenic activity of the peptide fragment Th2 was localized on a 15-residue tryptic peptide derived from the central portion of the sequence. These and further data indicate that at least six different antigenic determinants are present in peptide F-CB1α. (orig.) 891 AJ [de

Delineation of the Exact Transcription Termination Signal for Type 3 Polymerase III

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Zongliang Gao

2018-03-01

Full Text Available Type 3 Pol III promoters such as U6 are widely used for expression of small RNAs, including short hairpin RNA for RNAi applications and guide RNA in CRISPR genome-editing platforms. RNA polymerase III uses a T-stretch as termination signal, but the exact properties have not been thoroughly investigated. Here, we systematically measured the in vivo termination efficiency and the actual site of termination for different T-stretch signals in three commonly used human Pol III promoters (U6, 7SK, and H1. Both the termination efficiency and the actual termination site depend on the T-stretch signal. The T4 signal acts as minimal terminator, but full termination efficiency is reached only with a T-stretch of ≥6. The termination site within the T-stretch is quite heterogeneous, and consequently small RNAs have a variable U-tail of 1–6 nucleotides. We further report that such variable U-tails can have a significant negative effect on the functionality of the crRNA effector of the CRISPR-AsCpf1 system. We next improved these crRNAs by insertion of the HDV ribozyme to avoid U-tails. This study provides detailed design guidelines for small RNA expression cassettes based on Pol III.

The C-terminal tail of the gp41 transmembrane envelope glycoprotein of HIV-1 clades A, B, C, and D may exist in two conformations: an analysis of sequence, structure, and function

International Nuclear Information System (INIS)

Hollier, Mark J.; Dimmock, Nigel J.

2005-01-01

In addition to the major ectodomain, the gp41 transmembrane glycoprotein of HIV-1 is now known to have a minor ectodomain that is part of the long C-terminal tail. Both ectodomains are highly antigenic, carry neutralizing and non-neutralizing epitopes, and are involved in virus-mediated fusion activity. However, data have so far been biologically based, and derived solely from T cell line-adapted (TCLA), B clade viruses. Here we have carried out sequence and theoretically based structural analyses of 357 gp41 C-terminal sequences of mainly primary isolates of HIV-1 clades A, B, C, and D. Data show that all these viruses have the potential to form a tail loop structure (the minor ectodomain) supported by three, β-sheet, membrane-spanning domains (MSDs). This means that the first (N-terminal) tyrosine-based sorting signal of the gp41 tail is situated outside the cell membrane and is non-functional, and that gp41 that reaches the cell surface may be recycled back into the cytoplasm through the activity of the second tyrosine-sorting signal. However, we suggest that only a minority of cell-associated gp41 molecules - those destined for incorporation into virions - has 3 MSDs and the minor ectodomain. Most intracellular gp41 has the conventional single MSD, no minor ectodomain, a functional first tyrosine-based sorting signal, and in line with current thinking is degraded intracellularly. The gp41 structural diversity suggested here can be viewed as an evolutionary strategy to minimize HIV-1 envelope glycoprotein expression on the cell surface, and hence possible cytotoxicity and immune attack on the infected cell

Carboxy methylation of cashew nut tree exudate gum

International Nuclear Information System (INIS)

Silva, Durcilene A. da; Paula, Regina C.M.

2001-01-01

Anacardium occidentale exudate polysaccharide was carboxymethylated with monochloroacetic acid. The samples were characterized by NMR, solution viscometry, GPC and thermal analysis. Carboxymethylated cashew gum (CMGC) with a degree of substitution between 0,1-0,16 was obtained. Solution viscometry and GPC analysis showed that polymer molar mass degradation occurred. Sample with higher DS shows higher peak molar mass, intrinsic viscosity and thermal stability. NMR spectrum indicated that the carboxy methylation reaction occurs preferentially in C-6 of galactose residue. (author)

Structure-activity studies with carboxy- and amino-terminal fragments of neurotensin on hypothalamic neurons in vitro.

Science.gov (United States)

Baldino, F; Davis, L G; Wolfson, B

1985-09-09

The purpose of this study was to determine the structural requirements for the activity of neurotensin (NT1-13) on preoptic/anterior hypothalamic (POAH) neurons in vitro. Standard explant culture electrophysiological techniques were employed. NT was administered to POAH cultures through the superfusion fluid, or, to the vicinity of individual neurons by pressure ejection (0.5-10 psi) from micropipettes. Computer-generated, peri-event histograms were used to quantitate neuronal responses. Pressure ejection of NT1-13 (50 pM to 1 microM) consistently produced an excitatory effect on 30 of 42 neurons. The remaining cells were either inhibited or unaffected. Application of the C-terminal hexapeptide, NT8-13, but not the N-terminal octapeptide, NT1-8 (less than or equal to 1 mM), produced an excitatory response in 21 of 30 neurons, but was less potent than NT1-13. Application of an N-acetylated NT8-13 fragment (NTAC8-13) produced a response that was similar to that produced by NT8-13. The excitatory effects of NT1-13 and NT8-13 were maintained in medium which effectively blocked synaptic transmission (0 mM Ca2+/12 mM Mg2+ 1 mM EGTA). These data indicate that the C-terminal hexapeptide, but not the N-terminal octapeptide, produces a dose-related, excitatory effect on single neurons in the POAH in vitro. The persistence of these effects in Ca2+-free medium supports a postsynaptic site of action for these peptides.

The terminal portion of leptospiral immunoglobulin-like protein LigA confers protective immunity against lethal infection in the hamster model of leptospirosis.

Science.gov (United States)

Silva, Everton F; Medeiros, Marco A; McBride, Alan J A; Matsunaga, Jim; Esteves, Gabriela S; Ramos, João G R; Santos, Cleiton S; Croda, Júlio; Homma, Akira; Dellagostin, Odir A; Haake, David A; Reis, Mitermayer G; Ko, Albert I

2007-08-14

Subunit vaccines are a potential intervention strategy against leptospirosis, which is a major public health problem in developing countries and a veterinary disease in livestock and companion animals worldwide. Leptospiral immunoglobulin-like (Lig) proteins are a family of surface-exposed determinants that have Ig-like repeat domains found in virulence factors such as intimin and invasin. We expressed fragments of the repeat domain regions of LigA and LigB from Leptospira interrogans serovar Copenhageni. Immunization of Golden Syrian hamsters with Lig fragments in Freund's adjuvant induced robust antibody responses against recombinant protein and native protein, as detected by ELISA and immunoblot, respectively. A single fragment, LigANI, which corresponds to the six carboxy-terminal Ig-like repeat domains of the LigA molecule, conferred immunoprotection against mortality (67-100%, P<0.05) in hamsters which received a lethal inoculum of L. interrogans serovar Copenhageni. However, immunization with this fragment did not confer sterilizing immunity. These findings indicate that the carboxy-terminal portion of LigA is an immunoprotective domain and may serve as a vaccine candidate for human and veterinary leptospirosis.

Specific recognition of the C-terminal end of A beta 42 by a high affinity monoclonal antibody

DEFF Research Database (Denmark)

Axelsen, Trine Veje; Holm, Arne; Birkelund, Svend

2009-01-01

The neurotoxic peptide A beta(42) is derived from the amyloid precursor protein by proteolytic cleavage and is deposited in the brain of patients suffering from Alzheimer's disease (AD). In this study we generate a high affinity monoclonal antibody that targets the C-terminal end of A beta(42......) with high specificity. By this is meant that the paratope of the antibody must enclose the C-terminal end of A beta(42) including the carboxy-group of amino acid 42, and not just recognize a linear epitope in the C-terminal part of A beta. This has been accomplished by using a unique antigen construct made...... by the Ligand Presenting Assembly technology (LPA technology). This strategy results in dimeric presentation of the free C-terminal end of A beta(42). The generated Mab A beta1.1 is indeed specific for the C-terminal end of A beta(42) to which it binds with high affinity. Mab A beta1.1 recognizes the epitope...

The SmpB C-terminal tail helps tmRNA to recognize and enter stalled ribosomes

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Mickey R. Miller

2014-09-01

Full Text Available In bacteria, transfer-messenger RNA (tmRNA and SmpB comprise the most common and effective system for rescuing stalled ribosomes. Ribosomes stall on mRNA transcripts lacking stop codons and are rescued as the defective mRNA is swapped for the tmRNA template in a process known as trans-translation. The tmRNA–SmpB complex is recruited to the ribosome independent of a codon–anticodon interaction. Given that the ribosome uses robust discriminatory mechanisms to select against non-cognate tRNAs during canonical decoding, it has been hard to explain how this can happen. Recent structural and biochemical studies show that SmpB licenses tmRNA entry through its interactions with the decoding center and mRNA channel. In particular, the C-terminal tail of SmpB promotes both EFTu activation and accommodation of tmRNA, the former through interactions with 16S rRNA nucleotide G530 and the latter through interactions with the mRNA channel downstream of the A site. Here we present a detailed model of the earliest steps in trans-translation, and in light of these mechanistic considerations, revisit the question of how tmRNA preferentially reacts with stalled, non-translating ribosomes.

Estimating impact forces of tail club strikes by ankylosaurid dinosaurs.

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Victoria Megan Arbour

Full Text Available BACKGROUND: It has been assumed that the unusual tail club of ankylosaurid dinosaurs was used actively as a weapon, but the biological feasibility of this behaviour has not been examined in detail. Ankylosaurid tail clubs are composed of interlocking vertebrae, which form the handle, and large terminal osteoderms, which form the knob. METHODOLOGY/PRINCIPAL FINDINGS: Computed tomographic (CT scans of several ankylosaurid tail clubs referred to Dyoplosaurus and Euoplocephalus, combined with measurements of free caudal vertebrae, provide information used to estimate the impact force of tail clubs of various sizes. Ankylosaurid tails are modeled as a series of segments for which mass, muscle cross-sectional area, torque, and angular acceleration are calculated. Free caudal vertebrae segments had limited vertical flexibility, but the tail could have swung through approximately 100 degrees laterally. Muscle scars on the pelvis record the presence of a large M. longissimus caudae, and ossified tendons alongside the handle represent M. spinalis. CT scans showed that knob osteoderms were predominantly cancellous, which would have lowered the rotational inertia of the tail club and made it easier to wield as a weapon. CONCLUSIONS/SIGNIFICANCE: Large knobs could generate sufficient force to break bone during impacts, but average and small knobs could not. Tail swinging behaviour is feasible in ankylosaurids, but it remains unknown whether the tail was used for interspecific defense, intraspecific combat, or both.

(R,S-3-Carboxy-2-(isoquinolinium-2-ylpropanoate monohydrate

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Vladimir Stilinović

2010-06-01

Full Text Available The title compound, C13H11NO4·H2O, is a monohydrate of a betaine exhibiting a positively charged N-substituted isoquinoline group and a deprotonated carboxyl group. In the crystal, molecules are connected via short O—H...O hydrogen bonds between protonated and deprotonated carboxyl groups into chains of either R or S enantiomers along [001]. These chains are additionally connected by hydrogen bonding between water molecules and the deprotonated carboxy groups of neighbouring molecules.

Modulations of DNA Contacts by Linker Histones and Post-translational Modifications Determine the Mobility and Modifiability of Nucleosomal H3 Tails.

Science.gov (United States)

Stützer, Alexandra; Liokatis, Stamatios; Kiesel, Anja; Schwarzer, Dirk; Sprangers, Remco; Söding, Johannes; Selenko, Philipp; Fischle, Wolfgang

2016-01-21

Post-translational histone modifications and linker histone incorporation regulate chromatin structure and genome activity. How these systems interface on a molecular level is unclear. Using biochemistry and NMR spectroscopy, we deduced mechanistic insights into the modification behavior of N-terminal histone H3 tails in different nucleosomal contexts. We find that linker histones generally inhibit modifications of different H3 sites and reduce H3 tail dynamics in nucleosomes. These effects are caused by modulations of electrostatic interactions of H3 tails with linker DNA and largely depend on the C-terminal domains of linker histones. In agreement, linker histone occupancy and H3 tail modifications segregate on a genome-wide level. Charge-modulating modifications such as phosphorylation and acetylation weaken transient H3 tail-linker DNA interactions, increase H3 tail dynamics, and, concomitantly, enhance general modifiability. We propose that alterations of H3 tail-linker DNA interactions by linker histones and charge-modulating modifications execute basal control mechanisms of chromatin function. Copyright © 2016 Elsevier Inc. All rights reserved.

Seepage from uranium tailing ponds and its impact on ground water

International Nuclear Information System (INIS)

Rahn, P.H.; Mabes, D.L.

1978-01-01

A typical uranium mill produces about 1800 metric tons of tailing per day. An assessment of the seepage from an unlined tailing impoundment of a hypothetical mill in northwestern New Mexico indicates that about 2x10 5 m 3 /yr of water will seep over a period of 23 years. The seepage water will move vertically to the water table, and then spread out radially and ultimately downgradient with ground water. The principal dissolved contaminants in the tailing pond liquid are radium, thorium, sulfate, iron, manganese, and selenium; in addition, the liquid is acidic (pH=2). Many contaminants precipitate out as neutralization of seepage water occurs. At the termination of mill operation, radium will have advanced about 0.4 m and thorium no more than 0.1 m below the bottom of the tailing pond

The radioprotective effects of carboxy fullerene C3 on AHH-1 cell

International Nuclear Information System (INIS)

Shan, Husheng; Cai, Jianming; Huang, Yuecheng; Cui, Jianguo; Liu, Hanchen; Sun, Ding; Zhao, Fang; Dong, Junru; Li, Bailong

2008-01-01

Purpose: To investigate the radioprotective effects of carboxy fullerene C 3 on AHH-1 cell and it's prospective as a novel radioprotectant. Materials and Methods: Carboxy fullerene C 3 was prepared by chemical synthesis and trypan blue rejection test was performed to detect its cytotoxicity to AHH-1 cell. Then different concentration of C 3 was used to treat AHH-1 cells after radiated with 60 Coγ ray. Annexin-V/PI staining and flow cytometry assay were applied to assess the cell proliferation and apoptosis after irradiation. Results: C 3 showed little toxicity to AHH-1 cells with little change of trypan blue rejection rate during the drug concentration range 0-400 mg/L (P>0.05). We found in this study C 3 had good radioprotective effects to AHH-1 cell radiated with 1-8 Gy γ-ray. When the concentration was 10 mg/L, C 3 showed protection effects to AHH-1 cell irradiated with 4 Gy γ -ray, which was enhanced with increase of C 3 concentration. When the final concentration reached 200-400 mg/L, the cell survival rate after irradiation was similar to that of non-irradiated control cells(P >0.05). And the irradiation induced apoptosis and death rate were significantly lower than that of single radiation group cells(P 3 were time-dependant, and the best protection effects were observed when the C 3 was administered before irradiation (0-24 h). Conclusion: Carboxy fullerene C 3 has good radioprotective effects to AHH-1 cell, which is dose-dependent, and the higher concentration of C 3 is, the better protective effects it shows. In the effective drug concentration range of this study, C 3 do little harm on the survival rate of AHH-1 cell, which suggest that C 3 as a novel promising radioprotectant deserve to be further investigated. (author)

Characterization of Complete Histone Tail Proteoforms Using Differential Ion Mobility Spectrometry

DEFF Research Database (Denmark)

Shliaha, Pavel V; Baird, Matthew A; Nielsen, Mogens M

2017-01-01

Histone proteins are subject to dynamic post-translational modifications (PTMs) that cooperatively modulate the chromatin structure and function. Nearly all functional PTMs are found on the N-terminal histone domains (tails) of ∼50 residues protruding from the nucleosome core. Using high...

Polycystin-1 C-terminal Cleavage Is Modulated by Polycystin-2 Expression*

Science.gov (United States)

Bertuccio, Claudia A.; Chapin, Hannah C.; Cai, Yiqiang; Mistry, Kavita; Chauvet, Veronique; Somlo, Stefan; Caplan, Michael J.

2009-01-01

Autosomal dominant polycystic kidney disease is caused by mutations in the genes encoding polycystin-1 (PC-1) and polycystin-2 (PC-2). PC-1 cleavage releases its cytoplasmic C-terminal tail (CTT), which enters the nucleus. To determine whether PC-1 CTT cleavage is influenced by PC-2, a quantitative cleavage assay was utilized, in which the DNA binding and activation domains of Gal4 and VP16, respectively, were appended to PC-1 downstream of its CTT domain (PKDgalvp). Cells cotransfected with the resultant PKDgalvp fusion protein and PC-2 showed an increase in luciferase activity and in CTT expression, indicating that the C-terminal tail of PC-1 is cleaved and enters the nucleus. To assess whether CTT cleavage depends upon Ca2+ signaling, cells transfected with PKDgalvp alone or together with PC-2 were incubated with several agents that alter intracellular Ca2+ concentrations. PC-2 enhancement of luciferase activity was not altered by any of these treatments. Using a series of PC-2 C-terminal truncated mutations, we identified a portion of the PC-2 protein that is required to stimulate PC-1 CTT accumulation. These data demonstrate that release of the CTT from PC-1 is influenced and stabilized by PC-2. This effect is independent of Ca2+ but is regulated by sequences contained within the PC-2 C-terminal tail, suggesting a mechanism through which PC-1 and PC-2 may modulate a novel signaling pathway. PMID:19491093

Pre-termination in aflR of Aspergillus sojae inhibits aflatoxin biosynthesis.

Science.gov (United States)

Matsushima, K; Chang, P K; Yu, J; Abe, K; Bhatnagar, D; Cleveland, T E

2001-05-01

The aflR gene product is the main transcriptional regulator of aflatoxin biosynthesis in Aspergillus parasiticus and Aspergillus flavus. Although A. sojae strains do not produce aflatoxins, they do have an aflR homologue. When compared with the aflR of A. parasiticus, the A. sojae gene contains two mutations: an HAHA motif and a premature stop codon. To investigate the functionality of the A. sojae aflR gene product, we used a GAL4 one-hybrid system in yeast. The transcription-activating activity of AflR from A. sojae was 15% of that from A. parasiticus. The introduction of an additional aflR from A. sojae into an A. parasiticus strain did not affect aflatoxin productivity. A hybrid aflR comprising the amino-terminal region of A. sojae aflR and the carboxy-terminal region of A. parasiticus aflR suppressed the effect associated with pre-termination of the A. sojae AflR. We conclude that the premature stop codon of the A. sojae aflR is the key to its functionality and leads to prevention of aflatoxin biosynthesis through loss of the transcription of aflatoxin biosynthesis-related genes.

Requirement for the E1 Helicase C-Terminal Domain in Papillomavirus DNA Replication In Vivo.

Science.gov (United States)

Bergvall, Monika; Gagnon, David; Titolo, Steve; Lehoux, Michaël; D'Abramo, Claudia M; Melendy, Thomas; Archambault, Jacques

2016-01-06

The papillomavirus (PV) E1 helicase contains a conserved C-terminal domain (CTD), located next to its ATP-binding site, whose function in vivo is still poorly understood. The CTD is comprised of an alpha helix followed by an acidic region (AR) and a C-terminal extension termed the C-tail. Recent biochemical studies on bovine papillomavirus 1 (BPV1) E1 showed that the AR and C-tail regulate the oligomerization of the protein into a double hexamer at the origin. In this study, we assessed the importance of the CTD of human papillomavirus 11 (HPV11) E1 in vivo, using a cell-based DNA replication assay. Our results indicate that combined deletion of the AR and C-tail drastically reduces DNA replication, by 85%, and that further truncation into the alpha-helical region compromises the structural integrity of the E1 helicase domain and its interaction with E2. Surprisingly, removal of the C-tail alone or mutation of highly conserved residues within the domain still allows significant levels of DNA replication (55%). This is in contrast to the absolute requirement for the C-tail reported for BPV1 E1 in vitro and confirmed here in vivo. Characterization of chimeric proteins in which the AR and C-tail from HPV11 E1 were replaced by those of BPV1 indicated that while the function of the AR is transferable, that of the C-tail is not. Collectively, these findings define the contribution of the three CTD subdomains to the DNA replication activity of E1 in vivo and suggest that the function of the C-tail has evolved in a PV type-specific manner. While much is known about hexameric DNA helicases from superfamily 3, the papillomavirus E1 helicase contains a unique C-terminal domain (CTD) adjacent to its ATP-binding site. We show here that this CTD is important for the DNA replication activity of HPV11 E1 in vivo and that it can be divided into three functional subdomains that roughly correspond to the three conserved regions of the CTD: an alpha helix, needed for the structural

Requirement for the E1 Helicase C-Terminal Domain in Papillomavirus DNA Replication In Vivo

Science.gov (United States)

Bergvall, Monika; Gagnon, David; Titolo, Steve; Lehoux, Michaël; D'Abramo, Claudia M.

2016-01-01

ABSTRACT The papillomavirus (PV) E1 helicase contains a conserved C-terminal domain (CTD), located next to its ATP-binding site, whose function in vivo is still poorly understood. The CTD is comprised of an alpha helix followed by an acidic region (AR) and a C-terminal extension termed the C-tail. Recent biochemical studies on bovine papillomavirus 1 (BPV1) E1 showed that the AR and C-tail regulate the oligomerization of the protein into a double hexamer at the origin. In this study, we assessed the importance of the CTD of human papillomavirus 11 (HPV11) E1 in vivo, using a cell-based DNA replication assay. Our results indicate that combined deletion of the AR and C-tail drastically reduces DNA replication, by 85%, and that further truncation into the alpha-helical region compromises the structural integrity of the E1 helicase domain and its interaction with E2. Surprisingly, removal of the C-tail alone or mutation of highly conserved residues within the domain still allows significant levels of DNA replication (55%). This is in contrast to the absolute requirement for the C-tail reported for BPV1 E1 in vitro and confirmed here in vivo. Characterization of chimeric proteins in which the AR and C-tail from HPV11 E1 were replaced by those of BPV1 indicated that while the function of the AR is transferable, that of the C-tail is not. Collectively, these findings define the contribution of the three CTD subdomains to the DNA replication activity of E1 in vivo and suggest that the function of the C-tail has evolved in a PV type-specific manner. IMPORTANCE While much is known about hexameric DNA helicases from superfamily 3, the papillomavirus E1 helicase contains a unique C-terminal domain (CTD) adjacent to its ATP-binding site. We show here that this CTD is important for the DNA replication activity of HPV11 E1 in vivo and that it can be divided into three functional subdomains that roughly correspond to the three conserved regions of the CTD: an alpha helix, needed

New carboxy-functionalized terpyridines as precursors for zwitterionic ruthenium complexes for polymer-based solar cells

DEFF Research Database (Denmark)

Duprez, V.; Krebs, Frederik C

2006-01-01

New carboxy-terpyridines selectively functionalized at the 4-, 4'- and 4"-positions were prepared in a three-step procedure with good yields using, the Krohnke reaction followed by saponification. Their complexation with ruthenium led to symmetric and unsymmetric terpyridinyl zwitterionic complexes...

(R,S)-3-Carb?oxy-2-(isoquinolinium-2-yl)propanoate monohydrate

OpenAIRE

Stilinovi?, Vladimir; Frkanec, Leo; Kaitner, Branko

2010-01-01

The title compound, C13H11NO4·H2O, is a monohydrate of a betaine exhibiting a positively charged N-substituted isoquinoline group and a deprotonated carboxyl group. In the crystal, molecules are connected via short O—H...O hydrogen bonds between protonated and deprotonated carboxyl groups into chains of either R or S enantiomers along [001]. These chains are additionally connected by hydrogen bonding between water molecules and the deprotonated carboxy groups of neighbourin...

Synthesis and in vitro transfection efficiency of spermine-based cationic lipids with different central core structures and lipophilic tails.

Science.gov (United States)

Niyomtham, Nattisa; Apiratikul, Nuttapon; Suksen, Kanoknetr; Opanasopit, Praneet; Yingyongnarongkul, Boon-Ek

2015-02-01

Twelve spermine-based cationic lipids with four different central core structures (di(oxyethyl)amino, di(oxyethyl)amino carboxy, 3-amino-1,2-dioxypropyl and 2-amino-1,3-dioxypropyl) and three hydrophobic tails (lauric acid, myristic acid and palmitic acid) were synthesized. The liposomes containing lipids and DOPE showed moderate to good in vitro DNA delivery into HeLa cells. GFP expression experiments revealed that liposomes composed of lipids with 3-amino-1,2-dioxypropyl as a central core structure exhibited highest transfection efficiency under serum-free condition. Whereas, lipid with 2-amino-1,3-dioxypropyl core structure showed highest transfection under 10% serum condition. Moreover, the liposomes and lipoplexes composted of these cationic lipids exhibited low cytotoxicity. Copyright © 2015. Published by Elsevier Ltd.

Synthesis and characterization of pH sensitive carboxySNARF-1 nanoreactors

International Nuclear Information System (INIS)

Chen Yenchi; Ostafin, Agnes; Mizukami, Hiroshi

2010-01-01

A rapid response dual wavelength emission pH sensor consisting of carboxySNARF-1 nanoreactors has been synthesized and shown to provide accurate pH measurements even in complex biological media, where the unprotected pH responsive dyes have failed. The carboxySNARF-1 nanoreactor is made of a calcium phosphate shell covering phosphatidylcholine liposomes filled with the dye. Its mean diameter is 150 nm with dynamic light scattering, the shell thickness is 5-7 nm with TEM, and it contains about 10 dyes/particle. The nanoreactor's response time to pH change nearly equals that of the dye in solution. Its pH titration curves at two different wavelengths are equivalent to those of the dye in solution and fluorescence intensity ratio dependent pH analysis is possible using the modified Henderson-Hasselbalch equation. However, the pH dependent fluorescence ratios of the dye in solution in the presence of plasma and albumin are distorted, and application of the Henderson-Hasselbalch equation is not possible. We have found that the distortions may be restored using cSNARF-1 nanoreactors and the pK a of the dye in the nanoreactor then equals that in solution. These results suggest that the interference to the dye for the pH analyses with the environmental molecules may be reduced or prohibited by usage of cSNARF-1 nanoreactors.

Synthesis and characterization of pH sensitive carboxySNARF-1 nanoreactors

Energy Technology Data Exchange (ETDEWEB)

Chen Yenchi; Ostafin, Agnes [Department of Materials Science, University of Utah, Salt Lake City, UT (United States); Mizukami, Hiroshi, E-mail: a.ostafin@utah.edu [Department of Biological Science, Wayne State University, Detroit, MI (United States)

2010-05-28

A rapid response dual wavelength emission pH sensor consisting of carboxySNARF-1 nanoreactors has been synthesized and shown to provide accurate pH measurements even in complex biological media, where the unprotected pH responsive dyes have failed. The carboxySNARF-1 nanoreactor is made of a calcium phosphate shell covering phosphatidylcholine liposomes filled with the dye. Its mean diameter is 150 nm with dynamic light scattering, the shell thickness is 5-7 nm with TEM, and it contains about 10 dyes/particle. The nanoreactor's response time to pH change nearly equals that of the dye in solution. Its pH titration curves at two different wavelengths are equivalent to those of the dye in solution and fluorescence intensity ratio dependent pH analysis is possible using the modified Henderson-Hasselbalch equation. However, the pH dependent fluorescence ratios of the dye in solution in the presence of plasma and albumin are distorted, and application of the Henderson-Hasselbalch equation is not possible. We have found that the distortions may be restored using cSNARF-1 nanoreactors and the pK{sub a} of the dye in the nanoreactor then equals that in solution. These results suggest that the interference to the dye for the pH analyses with the environmental molecules may be reduced or prohibited by usage of cSNARF-1 nanoreactors.

Untangling spider silk evolution with spidroin terminal domains

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Garb Jessica E

2010-08-01

Full Text Available Abstract Background Spidroins are a unique family of large, structural proteins that make up the bulk of spider silk fibers. Due to the highly variable nature of their repetitive sequences, spidroin evolutionary relationships have principally been determined from their non-repetitive carboxy (C-terminal domains, though they offer limited character data. The few known spidroin amino (N-terminal domains have been difficult to obtain, but potentially contain critical phylogenetic information for reconstructing the diversification of spider silks. Here we used silk gland expression data (ESTs from highly divergent species to evaluate the functional significance and phylogenetic utility of spidroin N-terminal domains. Results We report 11 additional spidroin N-termini found by sequencing ~1,900 silk gland cDNAs from nine spider species that shared a common ancestor > 240 million years ago. In contrast to their hyper-variable repetitive regions, spidroin N-terminal domains have retained striking similarities in sequence identity, predicted secondary structure, and hydrophobicity. Through separate and combined phylogenetic analyses of N-terminal domains and their corresponding C-termini, we find that combined analysis produces the most resolved trees and that N-termini contribute more support and less conflict than the C-termini. These analyses show that paralogs largely group by silk gland type, except for the major ampullate spidroins. Moreover, spidroin structural motifs associated with superior tensile strength arose early in the history of this gene family, whereas a motif conferring greater extensibility convergently evolved in two distantly related paralogs. Conclusions A non-repetitive N-terminal domain appears to be a universal attribute of spidroin proteins, likely retained from the origin of spider silk production. Since this time, spidroin N-termini have maintained several features, consistent with this domain playing a key role in silk

Novel 3-carboxy- and 3-phosphonopyrazoline amino acids as potent and selective NMDA receptor antagonists

DEFF Research Database (Denmark)

Conti, Paola; Pinto, Andrea; Tamborini, Lucia

2010-01-01

The design and synthesis of new N1-substituted 3-carboxy- and 3-phosphonopyrazoline and pyrazole amino acids that target the glutamate binding site of NMDA receptors are described. An analysis of the stereochemical requirements for high-affinity interaction with these receptors was performed. We...

Comparison of the carboxy-terminal DP-repeat region in the co-chaperones Hop and Hip.

Science.gov (United States)

Nelson, Gregory M; Huffman, Holly; Smith, David F

2003-01-01

Functional steroid receptor complexes are assembled and maintained by an ordered pathway of interactions involving multiple components of the cellular chaperone machinery. Two of these components, Hop and Hip, serve as co-chaperones to the major heat shock proteins (Hsps), Hsp70 and Hsp90, and participate in intermediate stages of receptor assembly. In an effort to better understand the functions of Hop and Hip in the assembly process, we focused on a region of similarity located near the C-terminus of each co-chaperone. Contained within this region is a repeated sequence motif we have termed the DP repeat. Earlier mutagenesis studies implicated the DP repeat of either Hop or Hip in Hsp70 binding and in normal assembly of the co-chaperones with progesterone receptor (PR) complexes. We report here that the DP repeat lies within a protease-resistant domain that extends to or is near the C-terminus of both co-chaperones. Point mutations in the DP repeats render the C-terminal regions hypersensitive to proteolysis. In addition, a Hop DP mutant displays altered proteolytic digestion patterns, which suggest that the DP-repeat region influences the folding of other Hop domains. Although the respective DP regions of Hop and Hip share sequence and structural similarities, they are not functionally interchangeable. Moreover, a double-point mutation within the second DP-repeat unit of Hop that converts this to the sequence found in Hip disrupts Hop function; however, the corresponding mutation in Hip does not alter its function. We conclude that the DP repeats are important structural elements within a C-terminal domain, which is important for Hop and Hip function.

Tail posture predicts tail damage among weaned piglets

NARCIS (Netherlands)

Zonderland, J.J.; Riel, van J.W.; Bracke, M.B.M.; Kemp, B.; Hartog, den L.A.; Spoolder, H.A.M.

2009-01-01

Tail biting in pigs is a widespread behavioural vice with significant animal welfare and economic consequences. All too often, tail biting is not diagnosed nor dealt with until tail damage is present. To effectively reduce the negative effects of tail biting, it must be diagnosed in an early stage.

Interaction between the C-terminal domains of measles virus nucleoprotein and phosphoprotein: a tight complex implying one binding site.

Science.gov (United States)

Blocquel, David; Habchi, Johnny; Costanzo, Stéphanie; Doizy, Anthony; Oglesbee, Michael; Longhi, Sonia

2012-10-01

The intrinsically disordered C-terminal domain (N(TAIL) ) of the measles virus (MeV) nucleoprotein undergoes α-helical folding upon binding to the C-terminal X domain (XD) of the phosphoprotein. The N(TAIL) region involved in binding coupled to folding has been mapped to a conserved region (Box2) encompassing residues 489-506. In the previous studies published in this journal, we obtained experimental evidence supporting a K(D) for the N(TAIL) -XD binding reaction in the nM range and also showed that an additional N(TAIL) region (Box3, aa 517-525) plays a role in binding to XD. In striking contrast with these data, studies published in this journal by Kingston and coworkers pointed out a much less stable complex (K(D) in the μM range) and supported lack of involvement of Box3 in complex formation. The objective of this study was to critically re-evaluate the role of Box3 in N(TAIL) -XD binding. Since our previous studies relied on N(TAIL) -truncated forms possessing an irrelevant Flag sequence appended at their C-terminus, we, herein, generated an N(TAIL) devoid of Box3 and any additional C-terminal residues, as well as a form encompassing only residues 482-525. We then used isothermal titration calorimetry to characterize the binding reactions between XD and these N(TAIL) forms. Results effectively argue for the presence of a single XD-binding site located within Box2, in agreement with the results by Kingston et al., while providing clear experimental support for a high-affinity complex. Altogether, the present data provide mechanistic insights into the replicative machinery of MeV and clarify a hitherto highly debated point. Copyright © 2012 The Protein Society.

Characterization of C-terminally engineered laccases.

Science.gov (United States)

Liu, Yingli; Cusano, Angela Maria; Wallace, Erin C; Mekmouche, Yasmina; Ullah, Sana; Robert, Viviane; Tron, Thierry

2014-08-01

Extremities of proteins are potent sites for functionalization. Carboxy terminus variants of the Trametes sp. strain C30 LAC3 laccase were generated and produced in Saccharomyces cerevisiae. A variant deleted of the last 13 residues (CΔ) and its 6 His tagged counterpart (CΔ6H) were found active enzymes. The production of CΔ6H resulted in the synthesis of a unusually high proportion of highly glycosylated forms of the enzyme therefore allowing the additional purification of a hyper-glycosylated form of CΔ6H noted CΔ6Hh. Properties of CΔ, CΔ6H and CΔ6Hh were compared. Globally, LAC3 catalytic efficiency was moderately affected by terminal modifications except in CΔ for which the kcat/KM ratio decreased 4 fold (with syringaldazine as substrate) and 10 fold (with ABTS as substrate) respectively. The catalytic parameters kcat and KM of CΔ6H and CΔ6Hh were found to be strictly comparable revealing that over glycosylation does not affect the enzyme catalytic efficiency. To the contrary, in vitro deglycosylation of laccase drastically reduced its activity. So, despite a complex glycosylated pattern observed for some of the variant enzymes, terminal sequences of laccases appear to be appropriate sites for the functionalization/immobilization of laccase. Copyright © 2014 Elsevier B.V. All rights reserved.

(R,S)-3-Carb-oxy-2-(isoquinolinium-2-yl)propanoate monohydrate.

Science.gov (United States)

Stilinović, Vladimir; Frkanec, Leo; Kaitner, Branko

2010-05-22

The title compound, C(13)H(11)NO(4)·H(2)O, is a monohydrate of a betaine exhibiting a positively charged N-substituted isoquino-line group and a deprotonated carboxyl group. In the crystal, mol-ecules are connected via short O-H⋯O hydrogen bonds between protonated and deprotonated carboxyl groups into chains of either R or S enanti-omers along [001]. These chains are additionally connected by hydrogen bonding between water mol-ecules and the deprotonated carb-oxy groups of neighbouring mol-ecules.

Cystoviral polymerase complex protein P7 uses its acidic C-terminal tail to regulate the RNA-directed RNA polymerase P2.

Science.gov (United States)

Alphonse, Sébastien; Arnold, Jamie J; Bhattacharya, Shibani; Wang, Hsin; Kloss, Brian; Cameron, Craig E; Ghose, Ranajeet

2014-07-15

In bacteriophages of the cystovirus family, the polymerase complex (PX) encodes a 75-kDa RNA-directed RNA polymerase (P2) that transcribes the double-stranded RNA genome. Also a constituent of the PX is the essential protein P7 that, in addition to accelerating PX assembly and facilitating genome packaging, plays a regulatory role in transcription. Deletion of P7 from the PX leads to aberrant plus-strand synthesis suggesting its influence on the transcriptase activity of P2. Here, using solution NMR techniques and the P2 and P7 proteins from cystovirus ϕ12, we demonstrate their largely electrostatic interaction in vitro. Chemical shift perturbations on P7 in the presence of P2 suggest that this interaction involves the dynamic C-terminal tail of P7, more specifically an acidic cluster therein. Patterns of chemical shift changes induced on P2 by the P7 C-terminus resemble those seen in the presence of single-stranded RNA suggesting similarities in binding. This association between P2 and P7 reduces the affinity of the former toward template RNA and results in its decreased activity both in de novo RNA synthesis and in extending a short primer. Given the presence of C-terminal acidic tracts on all cystoviral P7 proteins, the electrostatic nature of the P2/P7 interaction is likely conserved within the family and could constitute a mechanism through which P7 regulates transcription in cystoviruses. Copyright © 2014 Elsevier Ltd. All rights reserved.

Preparation, characterization and biological evaluation of fac(M(CO)3)+ labeled amino carboxy ligands

International Nuclear Information System (INIS)

Baishya, Rinku; Halder, K.K.; Debnath, M.C.

2010-01-01

Full text: The objective of this study is to radiolabel various amino carboxy based chelating ligands with fac(M(CO) 3 )+ core, their physicochemical and biological characterization so that they can be used as bifunctional chelators and could be incorporated into biomolecules. Introduction: Amino acids as a class attract considerable physiological interest because of their participation in many vital processes associated with the living system. Some amino acids express in some particular organ like glutamic acid acts as excitatory neurotransmitter in mammalian brain. Histidine, methionine, tryptophan express in the tumor cell. Amino acids also play an important role for development of a new series of chelate complexes of 99m Tc that can direct the biodistribution of the radiotracer for purposes in diagnostic nuclear medicine. Various 99m Tc-amino acid chelates based on (Tc(V)O) 3 + core were reported from this laboratory some of which exhibited high renal specificity in animals. The structural requirements favouring this biological behaviour could be the oxotechnetium glycine sequence (TcO-NH-CH 2 -COOH) resembling the -CO-glycine sequence of hippurate. In recent years with the development of organometallic chemistry of technetium and rhenium for biological application intensive efforts have been executed on designing of the bifunctional chelator for effective coordination to (M(CO) 3 )+ core. The suitability and stability of the metal carbonyl core has given rise to a new platform for the preparation of the metal complexes of biologically active peptide in macroscopic quantity using the solid phase synthetic approach. Materials and Methods: We chelated different amino carboxy based ligands with ( 99m Tc(CO) 3 )+ and (Re(CO) 3 )+ core. The choice of amino acid was made by taking representative members from various groupings such as mono amino mono carboxylate, mono amino poly carboxylate, poly amino mono carboxylate and sulfur containing amino carboxylates. The

The role of Ctk1 kinase in termination of small non-coding RNAs.

Directory of Open Access Journals (Sweden)

Tineke L Lenstra

Full Text Available Transcription termination in Saccharomyces cerevisiae can be performed by at least two distinct pathways and is influenced by the phosphorylation status of the carboxy-terminal domain (CTD of RNA polymerase II (Pol II. Late termination of mRNAs is performed by the CPF/CF complex, the recruitment of which is dependent on CTD-Ser2 phosphorylation (Ser2P. Early termination of shorter cryptic unstable transcripts (CUTs and small nucleolar/nuclear RNAs (sno/snRNAs is performed by the Nrd1-Nab3-Sen1 (NNS complex that binds phosphorylated CTD-Ser5 (Ser5P via the CTD-interacting domain (CID of Nrd1p. In this study, mutants of the different termination pathways were compared by genome-wide expression analysis. Surprisingly, the expression changes observed upon loss of the CTD-Ser2 kinase Ctk1p are more similar to those derived from alterations in the Ser5P-dependent NNS pathway, than from loss of CTD-Ser2P binding factors. Tiling array analysis of ctk1Δ cells reveals readthrough at snoRNAs, at many cryptic unstable transcripts (CUTs and stable uncharacterized transcripts (SUTs, but only at some mRNAs. Despite the suggested predominant role in termination of mRNAs, we observed that a CTK1 deletion or a Pol II CTD mutant lacking all Ser2 positions does not result in a global mRNA termination defect. Rather, termination defects in these strains are widely observed at NNS-dependent genes. These results indicate that Ctk1p and Ser2 CTD phosphorylation have a wide impact in termination of small non-coding RNAs but only affect a subset of mRNA coding genes.

Characterization of the C-terminal ER membrane anchor of PTP1B

International Nuclear Information System (INIS)

Anderie, Ines; Schulz, Irene; Schmid, Andreas

2007-01-01

The tyrosine phosphatase PTP1B is an important regulator of cell function. In living cells PTP1B activity is restricted to the vicinity of the endoplasmic reticulum (ER) by post-translational C-terminal attachment of PTP1B to the ER membrane network. In our study we investigated the membrane anchor of PTP1B by use of EGFP fusion proteins. We demonstrate that the membrane anchor of PTP1B cannot be narrowed down to a unique amino acid sequence with a defined start and stop point but rather is moveable within several amino acids. Removal of up to seven amino acids from the C-terminus, as well as exchange of single amino acids in the putative transmembrane sequence did not influence subcellular localization of PTP1B. With the method of bimolecular fluorescence complementation we could demonstrate dimerization of PTP1B in vivo. Homodimerization was, in contrast to other tail-anchored proteins, not dependent on the membrane anchor. Our data demonstrate that the C-terminal membrane anchor of PTP1B is formed by a combination of a single stretch transmembrane domain (TMD) followed by a tail. TMD and tail length are variable and there are no sequence-specific features. Our data for PTP1B are consistent with a concept that explains the ER membrane anchor of tail-anchored proteins as a physicochemical structure

Epitope mapping of alpha-transforming growth factor: evidence of an immunodominant region

International Nuclear Information System (INIS)

Hazarika, P.; Dedman, J.R.

1988-01-01

Antisera were produced in rabbits and sheep against both full-length synthetic rat alpha-transforming growth factor and peptides corresponding to the carboxy-terminal 17 amino acids. These antisera were used to develop a peptide based radioimmunoassay of alpha-TGF. All antisera reacted only with a restricted region of the alpha-TGF corresponding to the 8 residues (43-50) at the carboxy-terminus: Cyslt. slash43, Glult. slash44, Hislt. slash45, Alalt. slash46, Asplt. slash47, Leult. slash48, Leult. slash49, Alalt. slash50. A series of synthetic peptides presenting deletions or substitutions of amino acids in this carboxy-terminal region were tested for competition with 125 I-alpha-TGF. All changes in the above peptide sequence resulted in a marked reduction in competition. All of the polyclonal antisera demonstrated similar specificity whether they were produced against the 50 amino acid, full-length alpha-TGF, against shorter 17 amino acid and 8 amino acid carboxy-terminal sequences

Epitope mapping of alpha-transforming growth factor: evidence of an immunodominant region

Energy Technology Data Exchange (ETDEWEB)

Hazarika, P.; Dedman, J.R.

1988-01-01

Antisera were produced in rabbits and sheep against both full-length synthetic rat alpha-transforming growth factor and peptides corresponding to the carboxy-terminal 17 amino acids. These antisera were used to develop a peptide based radioimmunoassay of alpha-TGF. All antisera reacted only with a restricted region of the alpha-TGF corresponding to the 8 residues (43-50) at the carboxy-terminus: Cyslt. slash43, Glult. slash44, Hislt. slash45, Alalt. slash46, Asplt. slash47, Leult. slash48, Leult. slash49, Alalt. slash50. A series of synthetic peptides presenting deletions or substitutions of amino acids in this carboxy-terminal region were tested for competition with /sup 125/I-alpha-TGF. All changes in the above peptide sequence resulted in a marked reduction in competition. All of the polyclonal antisera demonstrated similar specificity whether they were produced against the 50 amino acid, full-length alpha-TGF, against shorter 17 amino acid and 8 amino acid carboxy-terminal sequences.

Ubiquitin Carboxy-Terminal HydrolaseL3 Correlates with Human Sperm Count, Motility and Fertilization.

Science.gov (United States)

Wang, Meijiao; Yu, Tinghe; Hu, Lina; Cheng, Zhi; Li, Min

2016-01-01

Ubiquitin C-terminal hydrolase L3 (UCHL3) belongs to the group of deubiquitinating enzymes and plays a part in apoptosis of germ cells and the differentiation of spermatocytes into spermatids. However, the exact role of UCHL3 in human spermatogenesis and sperm function remains unknown. Here we examined the level and activity of UCHL3 in spermatozoa from men with asthenozoospermia (A), oligoasthenozoospermia (OA) or normozoospermia (N). Immunofluorescence indicated that UCHL3 was mainly localized in the acrosome and throughout the flagella, and western blotting revealed a lower level in A or OA compared with N (p sperm count, concentration and motility. The UCHL3 level was positively correlated with the normal fertilization rate (FR) and percentage of embryos suitable for transfer/cryopreservation of in vitro fertilization (IVF). The UCHL3 activity was also positively correlated with FR, the percentage of embryos suitable for transfer/cryopreservation and high-quality embryos rate of IVF. Aforementioned correlations were not manifested in intra-cytoplasmic sperm injection (ICSI). These findings suggest that UCHL3 may play a role in male infertility.

Solution structure of the C-terminal X domain of the measles virus phosphoprotein and interaction with the intrinsically disordered C-terminal domain of the nucleoprotein.

Science.gov (United States)

Gely, Stéphane; Lowry, David F; Bernard, Cédric; Jensen, Malene R; Blackledge, Martin; Costanzo, Stéphanie; Bourhis, Jean-Marie; Darbon, Hervé; Daughdrill, Gary; Longhi, Sonia

2010-01-01

In this report, the solution structure of the nucleocapsid-binding domain of the measles virus phosphoprotein (XD, aa 459-507) is described. A dynamic description of the interaction between XD and the disordered C-terminal domain of the nucleocapsid protein, (N(TAIL), aa 401-525), is also presented. XD is an all alpha protein consisting of a three-helix bundle with an up-down-up arrangement of the helices. The solution structure of XD is very similar to the crystal structures of both the free and bound form of XD. One exception is the presence of a highly dynamic loop encompassing XD residues 489-491, which is involved in the embedding of the alpha-helical XD-binding region of N(TAIL). Secondary chemical shift values for full-length N(TAIL) were used to define the precise boundaries of a transient helical segment that coincides with the XD-binding domain, thus shedding light on the pre-recognition state of N(TAIL). Titration experiments with unlabeled XD showed that the transient alpha-helical conformation of N(TAIL) is stabilized upon binding. Lineshape analysis of NMR resonances revealed that residues 483-506 of N(TAIL) are in intermediate exchange with XD, while the 475-482 and 507-525 regions are in fast exchange. The N(TAIL) resonance behavior in the titration experiments is consistent with a complex binding model with more than two states.

Telling tails: selective pressures acting on investment in lizard tails.

Science.gov (United States)

Fleming, Patricia A; Valentine, Leonie E; Bateman, Philip W

2013-01-01

Caudal autotomy is a common defense mechanism in lizards, where the animal may lose part or all of its tail to escape entrapment. Lizards show an immense variety in the degree of investment in a tail (i.e., length) across species, with tails of some species up to three or four times body length (snout-vent length [SVL]). Additionally, body size and form also vary dramatically, including variation in leg development and robustness and length of the body and tail. Autotomy is therefore likely to have fundamentally different effects on the overall body form and function in different species, which may be reflected directly in the incidence of lost/regenerating tails within populations or, over a longer period, in terms of relative tail length for different species. We recorded data (literature, museum specimens, field data) for relative tail length (n=350 species) and the incidence of lost/regenerating tails (n=246 species). We compared these (taking phylogeny into account) with intrinsic factors that have been proposed to influence selective pressures acting on caudal autotomy, including body form (robustness, body length, leg development, and tail specialization) and ecology (foraging behavior, physical and temporal niches), in an attempt to identify patterns that might reflect adaptive responses to these different factors. More gracile species have relatively longer tails (all 350 spp., P lost/regenerating tails for nocturnal lizards (all 246 spp., P pressure.

NMR assignments of SPOC domain of the human transcriptional corepressor SHARP in complex with a C-terminal SMRT peptide.

Science.gov (United States)

Mikami, Suzuka; Kanaba, Teppei; Ito, Yutaka; Mishima, Masaki

2013-10-01

The transcriptional corepressor SMRT/HDAC1-associated repressor protein (SHARP) recruits histone deacetylases. Human SHARP protein is thought to function in processes involving steroid hormone responses and the Notch signaling pathway. SHARP consists of RNA recognition motifs (RRMs) in the N-terminal region and the spen paralog and ortholog C-terminal (SPOC) domain in the C-terminal region. It is known that the SPOC domain binds the LSD motif in the C-terminal tail of corepressors silencing mediator for retinoid and thyroid receptor (SMRT)/nuclear receptor corepressor (NcoR). We are interested in delineating the mechanism by which the SPOC domain recognizes the LSD motif of the C-terminal tail of SMRT/NcoR. To this end, we are investigating the tertiary structure of the SPOC/SMRT peptide using NMR. Herein, we report on the (1)H, (13)C and (15)N resonance assignments of the SPOC domain in complex with a SMRT peptide, which contributes towards a structural understanding of the SPOC/SMRT peptide and its molecular recognition.

Short interspersed elements (SINEs) from insectivores. Two classes of mammalian SINEs distinguished by A-rich tail structure.

Science.gov (United States)

Borodulina, O R; Kramerov, D A

2001-10-01

Four tRNA-related SINE families were isolated from the genome of the shrew Sorex araneus (SOR element), mole Mogera robusta (TAL element), and hedgehog Mesechinus dauuricus (ERI-1 and ERI-2 elements). Each of these SINEs families is specific for a single Insectivora family: SOR, for Soricidae (shrews); TAL, for Talpidae (moles and desmans); ERI-1 and ERI-2, for Erinaceidae (hedgehogs). There is a long polypyrimidine region (TC-motif) in TAL, ERI-1, and ERI-2 elements located immediately upstream of an A-rich tail with polyadenylation signals (AATAAA) and an RNA polymerase III terminator (T(4-6)) or TCT(3-4)). Ten out of 14 analyzed mammalian tRNA-related SINE families have an A-rich tail similar to that of TAL, ERI-1, and ERI-2 elements. These elements were assigned to class T+. The other four SINEs including SOR element have no polyadenylation signal and transcription terminator in their A-rich tail and were assigned to class T-. Class T+ SINEs occur only in mammals, and most of them have a long polypyrimidine region. Possible models of retroposition of class T+ and T- SINEs are discussed.

Consolidation of tailings

International Nuclear Information System (INIS)

Nelson, J.D.; Wardwell, R.E.; Abt, S.R.; Staub, W.P.

1983-09-01

The integrity of cover systems placed on tailings impoundments will be affected by the potential for differential settlement of the tailings surface. Settlement of the sand fraction will occur relatively rapidly. The slimes will take longer time for consolidation and will produce greater settlement. This report reviews the phenomenon of consolidation for saturated and unsaturated tailings. The effect of load application by cover placement and the extent to which dewatering of tailings will cause consolidation are considered. In addition, the feasibility of inducing consolidation by alternative means and the potential applicability of these methods to tailings impoundments reclamation are discussed. Differential settlement of the tailings will cause tensile strain to be developed in covers. This strain could be large enough to cause cracking within a relatively brittle compacted clay. Dewatering of tailings by drainage can cause settlement even greater than that by placement of a cover material. Dewatering of the tailings would also increase the stability of the tailings surface, thereby enhancing reclamation operations. Consequently, in view of the enhanced surface stability and the fact that a portion of the differential settlement can be accomplished prior to cover placement, dewatering of tailings impoundments during operations may have benefical effects

Tail posture predicts tail biting outbreaks at pen level in weaner pigs

DEFF Research Database (Denmark)

Lahrmann, Helle Pelant; Hansen, Christian Fink; D'Eath, Rick

2018-01-01

posture and behaviour could be detected at pen level between upcoming tail biting pens (T-pens) and control pens (C-pens). The study included 2301 undocked weaner pigs in 74 pens (mean 31.1 pigs/pen; SD 1.5). Tails were scored three times weekly (wound freshness, wound severity and tail length) between 07......Detecting a tail biting outbreak early is essential to reduce the risk of pigs getting severe tail damage. A few previous studies suggest that tail posture and behavioural differences can predict an upcoming outbreak. The aim of the present study was therefore to investigate if differences in tail......:00 h-14:00 h from weaning until a tail biting outbreak. An outbreak (day 0) occurred when at least four pigs had a tail damage, regardless of wound freshness. On average 7.6 (SD 4.3) pigs had a damaged tail (scratches + wound) in T-pens on day 0. Tail posture and behaviour (activity, eating...

Overview of uranium mill tailings remedial action project of the United States of America 1995-1996

International Nuclear Information System (INIS)

Edge, R.

1997-01-01

From the early 1940's through the 1960's the United States federal government contracted for processed uranium ore for national defense research, weapons development and commercial nuclear energy. When these contracts were terminated, the mills ceased operation leaving large uranium tailings on the former mill sites. The purpose of the Uranium Remedial Action Project (UMTRA) is to minimize or eliminate potential health hazards resulting from exposure of the public to the tailings at these abandons sites. There are 24 inactive uranium mill tailings sites, in 10 states and an Indian reservation lands, included for clean up under the auspices of UMTRA. Presently the last 2 sites are under remediation. This paper addresses the progress of the project over the last two years. (author)

The Ku80 carboxy terminus stimulates joining and artemis-mediated processing of DNA ends

DEFF Research Database (Denmark)

Weterings, Eric; Verkaik, Nicole S; Keijzers, Guido

2008-01-01

Repair of DNA double-strand breaks (DSBs) is predominantly mediated by nonhomologous end joining (NHEJ) in mammalian cells. NHEJ requires binding of the Ku70-Ku80 heterodimer (Ku70/80) to the DNA ends and subsequent recruitment of the DNA-dependent protein kinase catalytic subunit (DNA-PK(CS)) an......Repair of DNA double-strand breaks (DSBs) is predominantly mediated by nonhomologous end joining (NHEJ) in mammalian cells. NHEJ requires binding of the Ku70-Ku80 heterodimer (Ku70/80) to the DNA ends and subsequent recruitment of the DNA-dependent protein kinase catalytic subunit (DNA......-PK(CS)) and the XRCC4/ligase IV complex. Activation of the DNA-PK(CS) serine/threonine kinase requires an interaction with Ku70/80 and is essential for NHEJ-mediated DSB repair. In contrast to previous models, we found that the carboxy terminus of Ku80 is not absolutely required for the recruitment and activation...... was phosphorylated to normal levels. This resulted in severely reduced levels of Artemis nuclease activity in vivo and in vitro. We therefore conclude that the Ku80 carboxy terminus is important to support DNA-PK(CS) autophosphorylation at specific sites, which facilitates DNA end processing by the Artemis...

The impact of the human DNA topoisomerase II C-terminal domain on activity.

Directory of Open Access Journals (Sweden)

Emma L Meczes

2008-03-01

Full Text Available Type II DNA topoisomerases (topos are essential enzymes needed for the resolution of topological problems that occur during DNA metabolic processes. Topos carry out an ATP-dependent strand passage reaction whereby one double helix is passed through a transient break in another. Humans have two topoII isoforms, alpha and beta, which while enzymatically similar are differentially expressed and regulated, and are thought to have different cellular roles. The C-terminal domain (CTD of the enzyme has the most diversity, and has been implicated in regulation. We sought to investigate the impact of the CTD domain on activity.We have investigated the role of the human topoII C-terminal domain by creating constructs encoding C-terminally truncated recombinant topoIIalpha and beta and topoIIalpha+beta-tail and topoIIbeta+alpha-tail chimeric proteins. We then investigated function in vivo in a yeast system, and in vitro in activity assays. We find that the C-terminal domain of human topoII isoforms is needed for in vivo function of the enzyme, but not needed for cleavage activity. C-terminally truncated enzymes had similar strand passage activity to full length enzymes, but the presence of the opposite C-terminal domain had a large effect, with the topoIIalpha-CTD increasing activity, and the topoIIbeta-CTD decreasing activity.In vivo complementation data show that the topoIIalpha C-terminal domain is needed for growth, but the topoIIbeta isoform is able to support low levels of growth without a C-terminal domain. This may indicate that topoIIbeta has an additional localisation signal. In vitro data suggest that, while the lack of any C-terminal domain has little effect on activity, the presence of either the topoIIalpha or beta C-terminal domain can affect strand passage activity. Data indicates that the topoIIbeta-CTD may be a negative regulator. This is the first report of in vitro data with chimeric human topoIIs.

The Analysis of Silver Nanoparticles After the Manipulation of Synthesis Parameters and with the Addition of Potassium 2-(9-Carboxy-1-Octylnonylsulfanyl)-Malonate

International Nuclear Information System (INIS)

Chin, S.Y.; Hakam, M.A.O.; Goh, S.C.; Yarmo, M.A.

2011-01-01

This research aimed to synthesize and characterize silver nanoparticles by manipulating the parameters involved in stabilizing the particles. The silver nanoparticles in this research were synthesized by reduction process of silver nitrate (AgNO 3 ) with sodium borohydrate (NaBH 4 ) as the reducing agent. The addition of potassium 2- (9-carboxy-1-octylnonylsulfanyl)-malonate into silver nanoparticles solution functioned as a stabilizing agent. The parameters involved in this research were the effect of time towards stability of silver nanoparticles, the effect of addition of potassium 2-(9-carboxy-1-octylnonylsulfanyl)- malonate and the pH level effect towards the synthesized silver nanoparticles. Based on the results obtained from Transmission Electron Microscopy (TEM), we have observed that the incorporation of potassium 2-(9-carboxy-1- octyl-nonanesulfonyl)-malonate as the stabilizing agent can prevent the agglomeration of silver nanoparticles within 16 days which is a breakthrough for the synthesis of silver nanoparticles by using sodium borohydride. The micrograph showed that the size of silver nanoparticles synthesized were within the range of 1.5 nm to 8.3 nm. In addition to that, Dynamic Light Scattering (DLS) technique was used in this research to measure the average size of the silver nanoparticles which stabilized with potassium 2-(9-carboxy-1-octyl-nonanesulfonyl)-malonate. X-Ray Diffraction (XRD) analysis was carried out to view the effect of manipulated pH level on crystalline silver nanoparticles structure. The XRD diffractogram showed the diffraction peaks which can be indexed to planes of face- centered cubic (fcc) of pure silver. (author)

Tail gut cyst.

Science.gov (United States)

Rao, G Mallikarjuna; Haricharan, P; Ramanujacharyulu, S; Reddy, K Lakshmi

2002-01-01

The tail gut is a blind extension of the hindgut into the tail fold just distal to the cloacal membrane. Remnants of this structure may form tail gut cyst. We report a 14-year-old girl with tail gut cyst that presented as acute abdomen. The patient recovered after cyst excision.

Localization of Daucus carota NMCP1 to the nuclear periphery: the role of the N-terminal region and an NLS-linked sequence motif, RYNLRR, in the tail domain

Directory of Open Access Journals (Sweden)

Yuta eKimura

2014-02-01

Full Text Available Recent ultrastructural studies revealed that a structure similar to the vertebrate nuclear lamina exists in the nuclei of higher plants. However, plant genomes lack genes for lamins and intermediate-type filament proteins, and this suggests that plant-specific nuclear coiled-coil proteins make up the lamina-like structure in plants. NMCP1 is a protein, first identified in Daucus carota cells, that localizes exclusively to the nuclear periphery in interphase cells. It has a tripartite structure comprised of head, rod, and tail domains, and includes putative nuclear localization signal (NLS motifs. We identified the functional NLS of DcNMCP1 (carrot NMCP1 and determined the protein regions required for localizing to the nuclear periphery using EGFP-fused constructs transiently expressed in Apium graveolens epidermal cells. Transcription was driven under a CaMV35S promoter, and the genes were introduced into the epidermal cells by a DNA-coated microprojectile delivery system. Of the NLS motifs, KRRRK and RRHK in the tail domain were highly functional for nuclear localization. Addition of the N-terminal 141 amino acids from DcNMCP1 shifted the localization of a region including these NLSs from the entire nucleus to the nuclear periphery. Using this same construct, the replacement of amino acids in RRHK or its preceding sequence, YNL, with alanine residues abolished localization to the nuclear periphery, while replacement of KRRRK did not affect localization. The sequence R/Q/HYNLRR/H, including YNL and the first part of the sequence of RRHK, is evolutionarily conserved in a subclass of NMCP1 sequences from many plant species. These results show that NMCP1 localizes to the nuclear periphery by a combined action of a sequence composed of R/Q/HYNLRR/H, NLS, and the N-terminal region including the head and a portion of the rod domain, suggesting that more than one binding site is implicated in localization of NMCP1.

The insulin-like growth factor axis and collagen turnover in asthmatic children treated with inhaled budesonide

DEFF Research Database (Denmark)

Wolthers, O D; Juul, A; Hansen, M

1995-01-01

Serum concentrations of growth hormone-dependent insulin-like growth factor I (IGF-I) and insulin-like growth factor binding protein-3 (IGFBP-3), the carboxy terminal propeptide of type I procollagen (PICP), the carboxy terminal pyridinoline cross-linked telopeptide of type I collagen (ICTP......) and the amino terminal propeptide of type III procollagen (PIIINP) were studied in 14 prepubertal children with asthma (mean age 9.7 years) during treatment with inhaled budesonide. The study design was a randomized, crossover trial with two double-blind treatment periods (200 and 800 micrograms) and one open...

Soluble γ-secretase modulators selectively inhibit the production of the 42-amino acid amyloid β peptide variant and augment the production of multiple carboxy-truncated amyloid β species.

Science.gov (United States)

Wagner, Steven L; Zhang, Can; Cheng, Soan; Nguyen, Phuong; Zhang, Xulun; Rynearson, Kevin D; Wang, Rong; Li, Yueming; Sisodia, Sangram S; Mobley, William C; Tanzi, Rudolph E

2014-02-04

Alzheimer's disease (AD) is characterized pathologically by an abundance of extracellular neuritic plaques composed primarily of the 42-amino acid amyloid β peptide variant (Aβ42). In the majority of familial AD (FAD) cases, e.g., those harboring mutations in presenilin 1 (PS1), there is a relative increase in the levels of Aβ42 compared to the levels of Aβ40. We previously reported the characterization of a series of aminothiazole-bridged aromates termed aryl aminothiazole γ-secretase modulators or AGSMs [Kounnas, M. Z., et al. (2010) Neuron 67, 769-780] and showed their potential for use in the treatment of FAD [Wagner, S. L., et al. (2012) Arch. Neurol. 69, 1255-1258]. Here we describe a series of GSMs with physicochemical properties improved compared to those of AGSMs. Specific heterocycle replacements of the phenyl rings in AGSMs provided potent molecules with improved aqueous solubilities. A number of these soluble γ-secretase modulators (SGSMs) potently lowered Aβ42 levels without inhibiting proteolysis of Notch or causing accumulation of amyloid precursor protein carboxy-terminal fragments, even at concentrations approximately 1000-fold greater than their IC50 values for reducing Aβ42 levels. The effects of one potent SGSM on Aβ peptide production were verified by matrix-assisted laser desorption ionization time-of-flight mass spectrometry, showing enhanced production of a number of carboxy-truncated Aβ species. This SGSM also inhibited Aβ42 peptide production in a highly purified reconstituted γ-secretase in vitro assay system and retained the ability to modulate γ-secretase-mediated proteolysis in a stably transfected cell culture model overexpressing a human PS1 mutation validating the potential for use in FAD.

Removal of uranium (VI) from aqueous systems by nanoscale zero-valent iron particles suspended in carboxy-methyl cellulose

Energy Technology Data Exchange (ETDEWEB)

Popescu, Ioana-Carmen, E-mail: ioana.popescu@icpmrr.ro [R and D National Institute for Metals and Radioactive Resources – ICPMRR Bucharest B-dul Carol I No. 70, Sector 2, 202917 Bucharest (Romania); Filip, Petru [C. D. Nenitescu Institute of Organic Chemistry, Splaiul Independentei 202B, Sector 6, 71141 Bucharest (Romania); Humelnicu, Doina, E-mail: doinah@uaic.ro [Al.I. Cuza University of Iasi, The Faculty of Chemistry, Bd. Carol-I No. 11, Iasi 700506 (Romania); Humelnicu, Ionel [Al.I. Cuza University of Iasi, The Faculty of Chemistry, Bd. Carol-I No. 11, Iasi 700506 (Romania); Scott, Thomas Bligh; Crane, Richard Andrew [Interface Analysis Centre, University of Bristol, 121 St. Michael’s Hill, Bristol BS2 8BS (United Kingdom)

2013-11-15

Carboxy-methyl-cellulose (CMC), a common “delivery vehicle” for the subsurface deployment of iron nanoparticles (INP) has been tested in the current work for the removal of aqueous uranium from synthetic water samples. A comparison of the removal of aqueous uranium from solutions using carboxy-methyl-cellulose with and without iron nanoparticles (CMC–INP and CMC, respectively) was tested over a 48 h reaction period. Analysis of liquid samples using spectrophotometry determined a maximum sorption capacity of uranium, Q{sub max}, of 185.18 mg/g and 322.58 mg/g for CMC and CMC–INP respectively, providing strong evidence of an independent aqueous uranium removal ability exhibited by CMC. The results point out that CMC provides an additional capacity for aqueous uranium removal. Further tests are required to determine whether similar behaviour will be observed for other aqueous contaminant species and if the presence of CMC within a INP slurry inhibits or aids the reactivity, reductive capacity and affinity of INP for aqueous contaminant removal.

Structure of bacteriophage T4 fibritin: a segmented coiled coil and the role of the C-terminal domain.

Science.gov (United States)

Tao, Y; Strelkov, S V; Mesyanzhinov, V V; Rossmann, M G

1997-06-15

Oligomeric coiled-coil motifs are found in numerous protein structures; among them is fibritin, a structural protein of bacteriophage T4, which belongs to a class of chaperones that catalyze a specific phage-assembly process. Fibritin promotes the assembly of the long tail fibers and their subsequent attachment to the tail baseplate; it is also a sensing device that controls the retraction of the long tail fibers in adverse environments and, thus, prevents infection. The structure of fibritin had been predicted from sequence and biochemical analyses to be mainly a triple-helical coiled coil. The determination of its structure at atomic resolution was expected to give insights into the assembly process and biological function of fibritin, and the properties of modified coiled-coil structures in general. The three-dimensional structure of fibritin E, a deletion mutant of wild-type fibritin, was determined to 2.2 A resolution by X-ray crystallography. Three identical subunits of 119 amino acid residues form a trimeric parallel coiled-coil domain and a small globular C-terminal domain about a crystallographic threefold axis. The coiled-coil domain is divided into three segments that are separated by insertion loops. The C-terminal domain, which consists of 30 residues from each subunit, contains a beta-propeller-like structure with a hydrophobic interior. The residues within the C-terminal domain make extensive hydrophobic and some polar intersubunit interactions. This is consistent with the C-terminal domain being important for the correct assembly of fibritin, as shown earlier by mutational studies. Tight interactions between the C-terminal residues of adjacent subunits counteract the latent instability that is suggested by the structural properties of the coiled-coil segments. Trimerization is likely to begin with the formation of the C-terminal domain which subsequently initiates the assembly of the coiled coil. The interplay between the stabilizing effect of the C-terminal

Uranium Mill Tailings Management

International Nuclear Information System (INIS)

Nelson, J.D.

1982-01-01

This book presents the papers given at the Fifth Symposium on Uranium Mill Tailings Management. Advances made with regard to uranium mill tailings management, environmental effects, regulations, and reclamation are reviewed. Topics considered include tailings management and design (e.g., the Uranium Mill Tailings Remedial Action Project, environmental standards for uranium mill tailings disposal), surface stabilization (e.g., the long-term stability of tailings, long-term rock durability), radiological aspects (e.g. the radioactive composition of airborne particulates), contaminant migration (e.g., chemical transport beneath a uranium mill tailings pile, the interaction of acidic leachate with soils), radon control and covers (e.g., radon emanation characteristics, designing surface covers for inactive uranium mill tailings), and seepage and liners (e.g., hydrologic observations, liner requirements)

More tail lesions among undocked than tail docked pigs in a conventional herd

DEFF Research Database (Denmark)

Lahrmann, H. P.; Busch, M. E.; D'Eath, R. B.

2017-01-01

The vast majority of piglets reared in the European Union (EU) and worldwide is tail docked to reduce the risk of being tail bitten, even though EU animal welfare legislation bans routine tail docking. Many conventional herds experience low levels of tail biting among tail docked pigs, however...

Antigenic relatedness of primate procollagens as determined by a competitive radioimmunoassay

International Nuclear Information System (INIS)

Taubman, M.B.; Goldberg, B.

1978-01-01

A radioimmunoassay specific for the nonhelical carboxy terminal portion of human type I procollagen was used to study the antigenic relatedness of primate procollagens. The assay identified reactive antigen in primate sera and in the media of primate fibroblast cultures. The displacement curves generated in the assay indicated that human and ape type I procollagens have antigenically identical carboxy terminal determinants which are partially cross-reactive with those from Old and New World monkeys. (author)

The C-terminal domains of NF-H and NF-M subunits maintain axonal neurofilament content by blocking turnover of the stationary neurofilament network.

Directory of Open Access Journals (Sweden)

Mala V Rao

Full Text Available Newly synthesized neurofilaments or protofilaments are incorporated into a highly stable stationary cytoskeleton network as they are transported along axons. Although the heavily phosphorylated carboxyl-terminal tail domains of the heavy and medium neurofilament (NF subunits have been proposed to contribute to this process and particularly to stability of this structure, their function is still obscure. Here we show in NF-H/M tail deletion [NF-(H/M(tailΔ] mice that the deletion of both of these domains selectively lowers NF levels 3-6 fold along optic axons without altering either rates of subunit synthesis or the rate of slow axonal transport of NF. Pulse labeling studies carried out over 90 days revealed a significantly faster rate of disappearance of NF from the stationary NF network of optic axons in NF-(H/M(tailΔ mice. Faster NF disappearance was accompanied by elevated levels of NF-L proteolytic fragments in NF-(H/M(tailΔ axons. We conclude that NF-H and NF-M C-terminal domains do not normally regulate NF transport rates as previously proposed, but instead increase the proteolytic resistance of NF, thereby stabilizing the stationary neurofilament cytoskeleton along axons.

Des-γ-Carboxy Prothrombin (DCP as a Potential Autologous Growth Factor for the Development of Hepatocellular Carcinoma

Directory of Open Access Journals (Sweden)

Yu-Sheng Zhang

2014-08-01

Full Text Available Des-γ-carboxy prothrombin (DCP is a prothrombin precursor produced in hepatocellular carcinoma (HCC. Because of deficiency of vitamin K or γ-glutamyl carboxylase in HCC cells, the 10 glutamic acid (Glu residues in prothrombin precursor did not completely carboxylate to γ-carboxylated glutamic acid (Gla residues, leaving some Glu residues remained in N-terminal domain. These prothrombin precursors with Glu residues are called DCPs. DCP displays insufficient coagulation activity. Since Liebman reported an elevated plasma DCP in patients with HCC, DCP has been used in the diagnosis of HCC. Recently, its biological malignant potential has been specified to describe DCP as an autologous growth factor to stimulate HCC growth and a paracrine factor to integrate HCC with vascular endothelial cells. DCP was found to stimulate HCC growth through activation of the DCP-Met-JAK1-STAT3 signaling pathway. DCP might increase HCC invasion and metastasis through activation of matrix metalloproteinase (MMPs and the ERK1/2 MAPK signaling pathway. DCP has also been found to play a crucial role in the formation of angiogenesis. DCP could increase the angiogenic factors released from HCC and vascular endothelial cells. These effects of DCP in angiogenesis might be related to activation of the DCP-KDR-PLC-γ-MAPK signaling pathway. In this article, we summarized recent studies on DCP in biological roles related to cancer progression and angiogenesis in HCC.

Presentations of the CONRAD tailings seminar : exploring the past, present and future of tailings technologies

International Nuclear Information System (INIS)

2004-01-01

This symposium explored oil sand tailings activities in Canada and their associated technologies. It was attended by active and prospective tailings researchers and developers of tailings technology who addressed timely issues regarding mature fine tailings, consolidated tailings, thickened tailings, and emerging tailings technologies. The collaborative research projects that are underway at the Oil Sands Tailings Research Facility were also discussed along with other topics such as tailings ponds management, water treatment, water quality and water supply security. All 16 presentations featured at this conference were indexed separately for inclusion in this database

Function of the cytoplasmic tail of human calcitonin receptor-like receptor in complex with receptor activity-modifying protein 2

Energy Technology Data Exchange (ETDEWEB)

Kuwasako, Kenji, E-mail: kuwasako@fc.miyazaki-u.ac.jp [Frontier Science Research Center, University of Miyazaki, 5200 Kihara, Kiyotake, Miyazaki 889-1692 (Japan); Kitamura, Kazuo; Nagata, Sayaka; Hikosaka, Tomomi [Division of Circulation and Body Fluid Regulation, Faculty of Medicine, University of Miyazaki, 5200 Kihara, Kiyotake, Miyazaki 889-1692 (Japan); Kato, Johji [Frontier Science Research Center, University of Miyazaki, 5200 Kihara, Kiyotake, Miyazaki 889-1692 (Japan)

2010-02-12

Receptor activity-modifying protein 2 (RAMP2) enables calcitonin receptor-like receptor (CRLR) to form an adrenomedullin (AM)-specific receptor. Here we investigated the function of the cytoplasmic C-terminal tail (C-tail) of human (h)CRLR by co-transfecting its C-terminal mutants into HEK-293 cells stably expressing hRAMP2. Deleting the C-tail from CRLR disrupted AM-evoked cAMP production or receptor internalization, but did not affect [{sup 125}I]AM binding. We found that CRLR residues 428-439 are required for AM-evoked cAMP production, though deleting this region had little effect on receptor internalization. Moreover, pretreatment with pertussis toxin (100 ng/mL) led to significant increases in AM-induced cAMP production via wild-type CRLR/RAMP2 complexes. This effect was canceled by deleting CRLR residues 454-457, suggesting Gi couples to this region. Flow cytometric analysis revealed that CRLR truncation mutants lacking residues in the Ser/Thr-rich region extending from Ser{sup 449} to Ser{sup 467} were unable to undergo AM-induced receptor internalization and, in contrast to the effect on wild-type CRLR, overexpression of GPCR kinases-2, -3 and -4 failed to promote internalization of CRLR mutants lacking residues 449-467. Thus, the hCRLR C-tail is crucial for AM-evoked cAMP production and internalization of the CRLR/RAMP2, while the receptor internalization is dependent on the aforementioned GPCR kinases, but not Gs coupling.

Galaxies with long tails

International Nuclear Information System (INIS)

Schweizer, F.

1978-01-01

Two types of galaxies with long tails are described. The first occurs in pairs, each individual one having a long tail and the second occurs on its own with two tails. NGC 7252 shows several characteristics which one would expect of a merger: a pair of tidal tails despite the splendid isolation, a single nucleus, tail motions in opposite directions relative to the nucleus, and chaotic motions of a strangely looped main body. (C.F.)

Conformational and functional analysis of the C-terminal globular head of the reovirus cell attachment protein.

Science.gov (United States)

Duncan, R; Horne, D; Strong, J E; Leone, G; Pon, R T; Yeung, M C; Lee, P W

1991-06-01

We have been investigating structure-function relationships in the reovirus cell attachment protein sigma 1 using various deletion mutants and protease analysis. In the present study, a series of deletion mutants were constructed which lacked 90, 44, 30, 12, or 4 amino acids from the C-terminus of the 455-amino acid-long reovirus type 3 (T3) sigma 1 protein. The full-length and truncated sigma 1 proteins were expressed in an in vitro transcription/translation system and assayed for L cell binding activity. It was found that the removal of as few as four amino acids from the C-terminus drastically affected the cell binding function of the sigma 1 protein. The C-terminal-truncated proteins were further characterized using trypsin, chymotrypsin, and monoclonal and polyclonal antibodies. Our results indicated that the C-terminal portions of the mutant proteins were misfolded, leading to a loss in cell binding function. The N-terminal fibrous tail of the proteins was unaffected by the deletions as was sigma 1 oligomerization, further illustrating the discrete structural and functional roles of the N- and C-terminal domains of sigma 1. In an attempt to identify smaller, functional peptides, full-length sigma 1 expressed in vitro was digested with trypsin and subsequently with chymotrypsin under various conditions. The results clearly demonstrated the highly stable nature of the C-terminal globular head of sigma 1, even when separated from the N-terminal fibrous tail. We concluded that: (1) the C-terminal globular head of sigma 1 exists as a compact, protease-resistant oligomeric structure; (2) an intact C-terminus is required for proper head folding and generation of the conformationally dependent cell binding domain.

Attitudes of Dutch Pig Farmers Towards Tail Biting and Tail Docking

OpenAIRE

Bracke, M.B.M.; Lauwere, de, C.C.; Wind, S.M.M.; Zonderland, J.J.

2013-01-01

The Dutch policy objective of a fully sustainable livestock sector without mutilations by 2023 is not compatible with the routine practice of tail docking to minimize the risk of tail biting. To examine farmer attitudes towards docking, a telephone survey was conducted among 487 conventional and 33 organic Dutch pig farmers. “Biting” (of tails, ears, or limbs) was identified by the farmers as a main welfare problem in pig farming. About half of the farmers reported to have no tail biting prob...

Compaction and binding properties of the intrinsically disordered C-terminal domain of Henipavirus nucleoprotein as unveiled by deletion studies.

Science.gov (United States)

Blocquel, David; Habchi, Johnny; Gruet, Antoine; Blangy, Stéphanie; Longhi, Sonia

2012-01-01

Henipaviruses are recently emerged severe human pathogens within the Paramyxoviridae family. Their genome is encapsidated by the nucleoprotein (N) within a helical nucleocapsid that recruits the polymerase complex via the phosphoprotein (P). We have previously shown that in Henipaviruses the N protein possesses an intrinsically disordered C-terminal domain, N(TAIL), which undergoes α-helical induced folding in the presence of the C-terminal domain (P(XD)) of the P protein. Using computational approaches, we previously identified within N(TAIL) four putative molecular recognition elements (MoREs) with different structural propensities, and proposed a structural model for the N(TAIL)-P(XD) complex where the MoRE encompassing residues 473-493 adopt an α-helical conformation at the P(XD) surface. In this work, for each N(TAIL) protein, we designed four deletion constructs bearing different combinations of the predicted MoREs. Following purification of the N(TAIL) truncated proteins from the soluble fraction of E. coli, we characterized them in terms of their conformational, spectroscopic and binding properties. These studies provided direct experimental evidence for the structural state of the four predicted MoREs, and showed that two of them have clear α-helical propensities, with the one spanning residues 473-493 being strictly required for binding to P(XD). We also showed that Henipavirus N(TAIL) and P(XD) form heterologous complexes, indicating that the P(XD) binding regions are functionally interchangeable between the two viruses. By combining spectroscopic and conformational analyses, we showed that the content in regular secondary structure is not a major determinant of protein compaction.

Distinct hydrophobic “patches” in the N- and C-tails of beta-catenin contribute to nuclear transport

Energy Technology Data Exchange (ETDEWEB)

Sharma, Manisha; Jamieson, Cara; Lui, Christina [Center for Cancer Research, The Westmead Institute for Medical Research, The University of Sydney, Westmead, NSW 2145 (Australia); Henderson, Beric R., E-mail: beric.henderson@sydney.edu.au [Center for Cancer Research, The Westmead Institute for Medical Research, The University of Sydney, Westmead, NSW 2145 (Australia)

2016-11-01

β-catenin is a key mediator of Wnt signaling and its deregulated nuclear accumulation can drive cancer progression. While the central armadillo (Arm) repeats of β-catenin stimulate nuclear entry, the N- and C-terminal “tail” sequences are thought to regulate turnover and transactivation. We show here that the N- and C-tails are also potent transport sequences. The unstructured tails of β-catenin, when individually fused to a GFP-reporter, could enter and exit the nucleus rapidly in live cells. Proximity ligation assays and pull-down assays identified a weak interaction between the tail sequences and the FG-repeats of nucleoporins, consistent with a possible direct translocation of β-catenin through the nuclear pore complex. Extensive alanine mutagenesis of the tail sequences revealed that nuclear translocation of β-catenin was dependent on specific uniformly distributed patches of hydrophobic residues, whereas the mutagenesis of acidic amino acids had no effect. Moreover, the mutation of hydrophobic patches within the N-tail and C-tail of full length β-catenin reduced nuclear transport rate and diminished its ability to activate transcription. We propose that the tail sequences can contribute to β-catenin transport and suggest a possible similar role for hydrophobic unstructured regions in other proteins. - Highlights: • We show that the N- and C-tails of beta-catenin possess nuclear transport activity. • Nuclear transport of the N- or C-tails requires specific hydrophobic amino acids. • Mutagenesis of the N-terminus diminished nuclear entry of full-length beta-catenin. • We propose the N-tail contributes to beta-catenin nuclear entry and transactivation.

Bar-tailed

NARCIS (Netherlands)

Duijns, S.; Hidayati, N.A.; Piersma, T.

2013-01-01

Capsule Across the European wintering range Bar-tailed Godwits Limosa lapponica lapponica selected polychaete worms and especially Ragworms Hediste diversicolor, with differences between areas due to variations in prey availability.Aims To determine the diet of Bar-tailed Godwits across their

TAIL ASYMPTOTICS OF LIGHT-TAILED WEIBULL-LIKE SUMS

DEFF Research Database (Denmark)

Asmussen, Soren; Hashorva, Enkelejd; Laub, Patrick J.

2017-01-01

We consider sums of n i.i.d. random variables with tails close to exp{-x(beta)} for some beta > 1. Asymptotics developed by Rootzen (1987) and Balkema, Kluppelberg, and Resnick (1993) are discussed from the point of view of tails rather than of densities, using a somewhat different angle...

New polyamides based on 1,3-bis(4-carboxy phenoxy propane and hydantoin derivatives: synthesis and properties

Directory of Open Access Journals (Sweden)

Khalil Faghihi

2010-04-01

Full Text Available Six new polyamides 5a-f containing flexible trimethylene segments in the main chain were synthesized through the direct polycondensation reaction of 1,3-bis(4-carboxy phenoxy propane 3 with six derivatives of hydantoins 5a-f in a medium consisting of N-methyl-2-pyrrolidone, triphenyl phosphite, calcium chloride and pyridine. The polycondensation reaction produced a series of novel polyamides in high yield with inherent viscosities between 0.30-0.47 dL/g. The resulted polymers were fully characterized by means of FT-IR, 1H-NMR spectroscopy, elemental analyses, inherent viscosity, solubility tests and gel permeation chromatography (GPC. Thermal properties of these polymers were investigated by using thermal gravimetric analysis (TGA and differential thermal gravimetry (DTG. The glass-transition temperatures of these polyamides were recorded between 130 and 155 oC by differential scanning calorimetry (DSC, and the 5% weight loss temperatures were ranging from 325 to 415 oC under nitrogen. 1,3-bis(4-Carboxy phenoxy propane 3 was prepared from the reaction of 4-hydroxy benzoic acid 1 with 1,3-dibromo propane 2 in the presence of NaOH solution.

Effects of weather and tailings properties on tailings drying times

Energy Technology Data Exchange (ETDEWEB)

Gantzer, C.; Fasking, T.; Costello, M.; Greenwood, J. [Barr Engineering, Calgary, AB (Canada)

2010-07-01

This PowerPoint presentation presented the results of a study conducted to determine the effects of weather and tailings properties on tailings drying times. Weather conditions have a significant impact the potential evaporation (PE) and actual evaporation (AE) of oil sands tailings. A 2-stage drying of slurry at a constant PE was conducted to determine the shrinkage limit of untreated mature fine tailings (MFT). An evaporation and seepage model was used to determine maximum first-stage drying rates. Measurements were also taken in a wind tunnel. Potential evaporation rates were calculated and evaporative water losses from the MFT were determined. Estimated drying times were presented. Results of the approach were compared with field measurements conducted in a previous study. Results of the study showed that evaporative water loss rates for May through August were limited by the properties of the tailings. Water loss rates were limited by weather for other months in the year-long study. tabs., figs.

Cameco engineered tailings program: linking research with industrial processes for improved tailings performance

International Nuclear Information System (INIS)

Kotzer, T.; Hendry, M.J.

2011-01-01

The waste product from uranium mining and milling that generates the greatest public and regulatory concern is tailings. The tailings contain all of the mined material except uranium plus a host of processing reagents. These minerals and compounds have the potential to harm the local environment if not deposited in a fashion that is both geochemically and geotechnically stable. Environmental leadership impels Cameco Corporation to ensure that the methods used to dispose of tailings are at the forefront of best available technologies whereby tailings production results in a product with geotechnical and geochemical characteristics that minimize the environmental impact associated with long-term storage of this product. Cameco has developed an Engineered Tailings (ET) program to ensure optimization of long-term tailings performance and minimal impacts of elements of concern (EOCs) to the receiving environment, regardless of the ore being milled. Within this program chemical and physical performance of tailings from geochemical and geotechnical investigations and baseline environmental data, integrated with regulatory requirements and corporate commitments, will be used to evaluate and set criteria for mill- and tailings management facilities-based chemical and physical tailings characteristics, identify key knowledge gaps, prioritize areas of concern and implement appropriate responses. This paper provides an overview of the Engineered Tailings program, the research being conducted as part of the ET program, and how it links with present and future Cameco operations. (author)

Uranium tailings sampling manual

International Nuclear Information System (INIS)

Feenstra, S.; Reades, D.W.; Cherry, J.A.; Chambers, D.B.; Case, G.G.; Ibbotson, B.G.

1985-01-01

The purpose of this manual is to describe the requisite sampling procedures for the application of uniform high-quality standards to detailed geotechnical, hydrogeological, geochemical and air quality measurements at Canadian uranium tailings disposal sites. The selection and implementation of applicable sampling procedures for such measurements at uranium tailings disposal sites are complicated by two primary factors. Firstly, the physical and chemical nature of uranium mine tailings and effluent is considerably different from natural soil materials and natural waters. Consequently, many conventional methods for the collection and analysis of natural soils and waters are not directly applicable to tailings. Secondly, there is a wide range in the physical and chemical nature of uranium tailings. The composition of the ore, the milling process, the nature of tailings depositon, and effluent treatment vary considerably and are highly site-specific. Therefore, the definition and implementation of sampling programs for uranium tailings disposal sites require considerable evaluation, and often innovation, to ensure that appropriate sampling and analysis methods are used which provide the flexibility to take into account site-specific considerations. The following chapters describe the objective and scope of a sampling program, preliminary data collection, and the procedures for sampling of tailings solids, surface water and seepage, tailings pore-water, and wind-blown dust and radon

Uranium mill tailings backfill management. Final report

International Nuclear Information System (INIS)

Thomson, B.M.; Heggen, R.J.

1984-01-01

Backfilling, the disposal of spent uranium mill tailings in empty mine stopes, has been practiced in the Grants Mineral Belt of New Mexico for nearly 20 years. The principal objective of backfilling is the prevention of roof collapse and hydraulic connection with overlying aquifers, increasing mine dewatering requirements. Backfilling is accomplished by gravity feed of a slurry of sand-fraction tailings and treated mine water into the slope. The effects of backfilling on surface discharge of mine wastewater are negligible due to the small fraction of the total flow represented by slurry decant. Furthermore, quality of the decant is not significantly below that of other mine waters. Groundwater effects of backfilling may be classified as short-term (while the mine is operational) and long-term (after dewatering operations have been terminated). Short-term effects are insignificant because of rapid and continuous flow to the mine sump. Long-term effects on aquifer water quality are predicted to be minimal due to (1) the small amount of slurry liquor present after drainage, (2) the precipitation of SO 4 and CO 3 phases, and (3) the reestablishment of reducing conditions and subsequent precipitation of major contaminants including U, As, Mo, Se, and V. 28 references, 19 figures, 9 tables

A library of 7TM receptor C-terminal tails - Interactions with the proposed post-endocytic sorting proteins ERM-binding phosphoprotein 50 (EBP50), N-ethylmaleimide-sensitive factor (NSF), sorting nexin 1 (SNX1), and G protein-coupled receptor-associated sorting protein (GASP)

DEFF Research Database (Denmark)

Heydorn, A.; Sondergaard, B.P.; Ersbøll, Bjarne Kjær

2004-01-01

Adaptor and scaffolding proteins determine the cellular targeting, the spatial, and thereby the functional association of G protein-coupled seven-transmembrane receptors with co-receptors, transducers, and downstream effectors and the adaptors determine post-signaling events such as receptor...... only a single receptor tail, i.e. the beta(2)-adrenergic receptor, whereas N-ethylmaleimide-sensitive factor bound 11 of the tail-fusion proteins. Of the two proteins proposed to target receptors for lysosomal degradation, sorting nexin 1 (SNX1) bound 10 and the C-terminal domain of G protein...... the expected nanomolar affinities for interaction with SNX1. Truncations of the NK1 receptor revealed that an extended binding epitope is responsible for the interaction with both SNX1 and G protein-coupled receptor-associated sorting protein as well as with N-ethylmaleimide-sensitive factor. It is concluded...

A library of 7TM receptor C-terminal tails. Interactions with the proposed post-endocytic sorting proteins ERM-binding phosphoprotein 50 (EBP50), N-ethylmaleimide-sensitive factor (NSF), sorting nexin 1 (SNX1), and G protein-coupled receptor-associated sorting protein (GASP)

DEFF Research Database (Denmark)

Heydorn, Arne; Søndergaard, Birgitte P; Ersbøll, Bjarne

2004-01-01

Adaptor and scaffolding proteins determine the cellular targeting, the spatial, and thereby the functional association of G protein-coupled seven-transmembrane receptors with co-receptors, transducers, and downstream effectors and the adaptors determine post-signaling events such as receptor...... only a single receptor tail, i.e. the beta(2)-adrenergic receptor, whereas N-ethylmaleimide-sensitive factor bound 11 of the tail-fusion proteins. Of the two proteins proposed to target receptors for lysosomal degradation, sorting nexin 1 (SNX1) bound 10 and the C-terminal domain of G protein...... the expected nanomolar affinities for interaction with SNX1. Truncations of the NK(1) receptor revealed that an extended binding epitope is responsible for the interaction with both SNX1 and G protein-coupled receptor-associated sorting protein as well as with N-ethylmaleimide-sensitive factor. It is concluded...

Effects of various tailings covers on radon gas emanation from pyritic uranium tailings

International Nuclear Information System (INIS)

Dave, N.K.; Lim, T.P.

1987-01-01

Radon emanation studies were carried out at an inactive pyritic uranium tailings site in Elliot Lake, Ontario, Canada, to evaluate the effects of various existing dry and wet covers on radon flux rates. Measurements were taken using activated charcoal cartridges for various surface covers consisting of bare, vegetated, acidophilic moss with high degree of water saturation, compacted crushed rock and gravel, and winter snow. The results showed that at a given site, there was no significant difference in radon emanation rates between various tailings covers and bare tailings. In particular, no increase In radon emanation rates from vegetated areas compared to bare tailings was observed. Radon emanation rates varied spatially depending on tailings grain size, porosity, moisture content and on pressure and water table variations. The emanation rates were higher for tailings with low water contents compared to those for wet and moss covered tailings

Identifying and quantifying proteolytic events and the natural N terminome by terminal amine isotopic labeling of substrates.

Science.gov (United States)

Kleifeld, Oded; Doucet, Alain; Prudova, Anna; auf dem Keller, Ulrich; Gioia, Magda; Kizhakkedathu, Jayachandran N; Overall, Christopher M

2011-09-22

Analysis of the sequence and nature of protein N termini has many applications. Defining the termini of proteins for proteome annotation in the Human Proteome Project is of increasing importance. Terminomics analysis of protease cleavage sites in degradomics for substrate discovery is a key new application. Here we describe the step-by-step procedures for performing terminal amine isotopic labeling of substrates (TAILS), a 2- to 3-d (depending on method of labeling) high-throughput method to identify and distinguish protease-generated neo-N termini from mature protein N termini with all natural modifications with high confidence. TAILS uses negative selection to enrich for all N-terminal peptides and uses primary amine labeling-based quantification as the discriminating factor. Labeling is versatile and suited to many applications, including biochemical and cell culture analyses in vitro; in vivo analyses using tissue samples from animal and human sources can also be readily performed. At the protein level, N-terminal and lysine amines are blocked by dimethylation (formaldehyde/sodium cyanoborohydride) and isotopically labeled by incorporating heavy and light dimethylation reagents or stable isotope labeling with amino acids in cell culture labels. Alternatively, easy multiplex sample analysis can be achieved using amine blocking and labeling with isobaric tags for relative and absolute quantification, also known as iTRAQ. After tryptic digestion, N-terminal peptide separation is achieved using a high-molecular-weight dendritic polyglycerol aldehyde polymer that binds internal tryptic and C-terminal peptides that now have N-terminal alpha amines. The unbound naturally blocked (acetylation, cyclization, methylation and so on) or labeled mature N-terminal and neo-N-terminal peptides are recovered by ultrafiltration and analyzed by tandem mass spectrometry (MS/MS). Hierarchical substrate winnowing discriminates substrates from the background proteolysis products and

The structure of the Myo4p globular tail and its function in ASH1 mRNA localization.

Science.gov (United States)

Heuck, Alexander; Fetka, Ingrid; Brewer, Daniel N; Hüls, Daniela; Munson, Mary; Jansen, Ralf-Peter; Niessing, Dierk

2010-05-03

Type V myosin (MyoV)-dependent transport of cargo is an essential process in eukaryotes. Studies on yeast and vertebrate MyoV showed that their globular tails mediate binding to the cargo complexes. In Saccharomyces cerevisiae, the MyoV motor Myo4p interacts with She3p to localize asymmetric synthesis of HO 1 (ASH1) mRNA into the bud of dividing cells. A recent study showed that localization of GFP-MS2-tethered ASH1 particles does not require the Myo4p globular tail, challenging the supposed role of this domain. We assessed ASH1 mRNA and Myo4p distribution more directly and found that their localization is impaired in cells expressing globular tail-lacking Myo4p. In vitro studies further show that the globular tail together with a more N-terminal linker region is required for efficient She3p binding. We also determined the x-ray structure of the Myo4p globular tail and identify a conserved surface patch important for She3p binding. The structure shows pronounced similarities to membrane-tethering complexes and indicates that Myo4p may not undergo auto-inhibition of its motor domain.

Polarized axonal surface expression of neuronal KCNQ potassium channels is regulated by calmodulin interaction with KCNQ2 subunit.

Directory of Open Access Journals (Sweden)

John P Cavaretta

Full Text Available KCNQ potassium channels composed of KCNQ2 and KCNQ3 subunits give rise to the M-current, a slow-activating and non-inactivating voltage-dependent potassium current that limits repetitive firing of action potentials. KCNQ channels are enriched at the surface of axons and axonal initial segments, the sites for action potential generation and modulation. Their enrichment at the axonal surface is impaired by mutations in KCNQ2 carboxy-terminal tail that cause benign familial neonatal convulsion and myokymia, suggesting that their correct surface distribution and density at the axon is crucial for control of neuronal excitability. However, the molecular mechanisms responsible for regulating enrichment of KCNQ channels at the neuronal axon remain elusive. Here, we show that enrichment of KCNQ channels at the axonal surface of dissociated rat hippocampal cultured neurons is regulated by ubiquitous calcium sensor calmodulin. Using immunocytochemistry and the cluster of differentiation 4 (CD4 membrane protein as a trafficking reporter, we demonstrate that fusion of KCNQ2 carboxy-terminal tail is sufficient to target CD4 protein to the axonal surface whereas inhibition of calmodulin binding to KCNQ2 abolishes axonal surface expression of CD4 fusion proteins by retaining them in the endoplasmic reticulum. Disruption of calmodulin binding to KCNQ2 also impairs enrichment of heteromeric KCNQ2/KCNQ3 channels at the axonal surface by blocking their trafficking from the endoplasmic reticulum to the axon. Consistently, hippocampal neuronal excitability is dampened by transient expression of wild-type KCNQ2 but not mutant KCNQ2 deficient in calmodulin binding. Furthermore, coexpression of mutant calmodulin, which can interact with KCNQ2/KCNQ3 channels but not calcium, reduces but does not abolish their enrichment at the axonal surface, suggesting that apo calmodulin but not calcium-bound calmodulin is necessary for their preferential targeting to the axonal

Uranium mill tailings conditioning technology

International Nuclear Information System (INIS)

Dreesen, D.R.; Cokal, E.J.; Wangen, L.E.; Williams, J.M.; O'Brien, P.D.; Thode, E.F.

1982-01-01

Conditioning of uranium mill tailings involves the physicochemical alteration of tailings to remove or immobilize mobile radionuclides and toxic trace elements before disposal in a repository. The principal immobilization approach under investigation is sintering tailings at high temperatures (1100-1200 deg. C) to radically alter the structure of tailings. This thermal stabilization at 1200 deg. C reduced radon emanation power for tailings sands by factors of 20 to 200 and for tailings fines by factors of 300 to 1100. Substantial reductions in the leachability of most contaminants have been found for thermally conditioned tailings. Obvious mineral transformations occur, including an increase in amorphous material, the conversion of gypsum to anhydrite and its subsequent decomposition, the disappearance of clay minerals, and some decrease in quartz content. A conceptual thermal stabilization process has been developed wherein obsolete coal-fired rotary cement kilns perform the sintering. An economic analysis of this conceptual process has shown that thermal stabilization can be competitive at certain tailings sites with other remedial actions requiring the excavation, transportation, and burial of tailings in a repository. An analysis of the long-term radiological hazard posed by untreated tailings and by tailings conditioned by radionuclide removal has illustrated the necessity of extracting both 226 Ra and 230 Th to achieve long-term hazard reductions. Sulphuric acid extraction of residual mineral values and important radionuclides from tailings has been investigated. Concentrated H 2 SO 4 can extract up to 80% of the 226 Ra, 70% of the Ba, and 90% of the 230 Th from tailings in a single stage extraction. An economic analysis of a sulphuric acid leach process was made to determine whether the value of minerals recovered from tailings would offset the leaching cost. For one relatively mineral-rich tailings pile, the U and V values would more than pay for the

Deletion of the Tail Domain of the Kinesin-5 Cin8 Affects Its Directionality*

Science.gov (United States)

Düselder, André; Fridman, Vladimir; Thiede, Christina; Wiesbaum, Alice; Goldstein, Alina; Klopfenstein, Dieter R.; Zaitseva, Olga; Janson, Marcel E.; Gheber, Larisa; Schmidt, Christoph F.

2015-01-01

The bipolar kinesin-5 motors are one of the major players that govern mitotic spindle dynamics. Their bipolar structure enables them to cross-link and slide apart antiparallel microtubules (MTs) emanating from the opposing spindle poles. The budding yeast kinesin-5 Cin8 was shown to switch from fast minus-end- to slow plus-end-directed motility upon binding between antiparallel MTs. This unexpected finding revealed a new dimension of cellular control of transport, the mechanism of which is unknown. Here we have examined the role of the C-terminal tail domain of Cin8 in regulating directionality. We first constructed a stable dimeric Cin8/kinesin-1 chimera (Cin8Kin), consisting of head and neck linker of Cin8 fused to the stalk of kinesin-1. As a single dimeric motor, Cin8Kin switched frequently between plus and minus directionality along single MTs, demonstrating that the Cin8 head domains are inherently bidirectional, but control over directionality was lost. We next examined the activity of a tetrameric Cin8 lacking only the tail domains (Cin8Δtail). In contrast to wild-type Cin8, the motility of single molecules of Cin8Δtail in high ionic strength was slow and bidirectional, with almost no directionality switches. Cin8Δtail showed only a weak ability to cross-link MTs in vitro. In vivo, Cin8Δtail exhibited bias toward the plus-end of the MTs and was unable to support viability of cells as the sole kinesin-5 motor. We conclude that the tail of Cin8 is not necessary for bidirectional processive motion, but is controlling the switch between plus- and minus-end-directed motility. PMID:25991727

The influence of carboxy methyl cellulose (CMC) on shale stability; Influencia do carboximetilcelulose (CMC) na estabilidade de folhelhos

Energy Technology Data Exchange (ETDEWEB)

Salles Filho, Antonio Alves de; Quezada, Augusto Eduardo Donoso [Grupo Ultra, XX (Brazil). Setor de Vendas Petroleo; Oliveira, Telma de [Grupo Ultra, XX (Brazil). Centro de Pesquisas e Desenvolvimento

1988-12-31

The methodology used in developing high and low viscosity purified CMC`s specific to salty and saturated drilling fluids is discussed. It is shown how CMC carboxy methyl groups, molecular weight, and uniformity of substitution affect the action of these products, decreasing overall drilling costs, substantially increasing penetration rates, and affording greater well wall stability. (author) 5 refs., 19 figs., 3 tabs.

Uranium tailings bibliography

International Nuclear Information System (INIS)

Holoway, C.F.; Goldsmith, W.A.; Eldridge, V.M.

1975-12-01

A bibliography containing 1,212 references is presented with its focus on the general problem of reducing human exposure to the radionuclides contained in the tailings from the milling of uranium ore. The references are divided into seven broad categories: uranium tailings pile (problems and perspectives), standards and philosophy, etiology of radiation effects, internal dosimetry and metabolism, environmental transport, background sources of tailings radionuclides, and large-area decontamination

Performance Comparison between Neutralization Tailings and Flotation Tailings Used for Backfill Mix and Mechanism Analysis

Directory of Open Access Journals (Sweden)

Bin Han

2016-01-01

Full Text Available A comparison test of different tailings used for underground backfill was conducted, using neutralized tailings from BIOX and flotation tailings of Jinfeng Mine. Laboratory comparison test results show that, with neutralized tailings, when the cement dosage is at 19%, backfill UCS after 7 days, 14 days, and 28 days are 105%–163%, 80%–102%, and 33%–43%, respectively, which are higher than those of flotation tailings. When the cement dosage is at 12%, backfill UCS after 7 days, 14 days, and 28 days are 58%–77%, 50%–60%, and 28%–51%, respectively, which are higher than those of flotation tailings. Slurry fluidity of neutralized tailings is lower than that of flotation tailings, while, in these two tailings, the difference of slump and diffusivity values is less than 6%, which is not a significant difference in slurry fluidity. The reason for neutralized tailings showing higher UCS is as follows: during backfill curing, neutralization tailings produce abundant crystals of CaSO4·2H2O in interlaced structure which helps in combining aggregates closely; CaSO4·2H2O hydrates with C3A C4AF contained in the cement and forms clavate cement bacillus which works as a micro reinforcing steel bar. The test proved that neutralized tailings are more optimal for backfilling.

The insulin-like growth factor axis and collagen turnover in asthmatic children treated with inhaled budesonide

DEFF Research Database (Denmark)

Wolthers, O D; Juul, A; Hansen, M

1995-01-01

Serum concentrations of growth hormone-dependent insulin-like growth factor I (IGF-I) and insulin-like growth factor binding protein-3 (IGFBP-3), the carboxy terminal propeptide of type I procollagen (PICP), the carboxy terminal pyridinoline cross-linked telopeptide of type I collagen (ICTP) and ...... the calculations (p reduced synthesis of type III collagen. A similar trend was observed in ICTP levels when the 400 micrograms period was excluded from the calculations (p = 0.05; z = -1.9). No other statistically significant variations were seen....

Efficient and Scalable Synthesis of 4-Carboxy-Pennsylvania Green Methyl Ester: A Hydrophobic Building Block for Fluorescent Molecular Probes.

Science.gov (United States)

Woydziak, Zachary R; Fu, Liqiang; Peterson, Blake R

2014-01-01

Fluorinated fluorophores are valuable tools for studies of biological systems. However, amine-reactive single-isomer derivatives of these compounds are often very expensive. To provide an inexpensive alternative, we report a practical synthesis of 4-carboxy-Pennsylvania Green methyl ester. Derivatives of this hydrophobic fluorinated fluorophore, a hybrid of the dyes Oregon Green and Tokyo Green, are often cell permeable, enabling labeling of intracellular targets and components. Moreover, the low pKa of Pennsylvania Green (4.8) confers bright fluorescence in acidic cellular compartments such as endosomes, enhancing its utility for chemical biology investigations. To improve access to the key intermediate 2,7-difluoro-3,6-dihydroxyxanthen-9-one, we subjected bis-(2,4,5-trifluorophenyl)methanone to iterative nucleophilic aromatic substitution by hydroxide on scales of > 40 g. This intermediate was used to prepare over 15 grams of pure 4-carboxy-Pennsylvania Green methyl ester in 28% overall yield without requiring chromatography. This compound can be converted into the amine reactive N -hydroxysuccinimidyl ester in essentially quantitative yield for the synthesis of a wide variety of fluorescent molecular probes.

The carboxy-terminal αN helix of the archaeal XerA tyrosine recombinase is a molecular switch to control site-specific recombination.

Science.gov (United States)

Serre, Marie-Claude; El Arnaout, Toufic; Brooks, Mark A; Durand, Dominique; Lisboa, Johnny; Lazar, Noureddine; Raynal, Bertrand; van Tilbeurgh, Herman; Quevillon-Cheruel, Sophie

2013-01-01

Tyrosine recombinases are conserved in the three kingdoms of life. Here we present the first crystal structure of a full-length archaeal tyrosine recombinase, XerA from Pyrococcus abyssi, at 3.0 Å resolution. In the absence of DNA substrate XerA crystallizes as a dimer where each monomer displays a tertiary structure similar to that of DNA-bound Tyr-recombinases. Active sites are assembled in the absence of dif except for the catalytic Tyr, which is extruded and located equidistant from each active site within the dimer. Using XerA active site mutants we demonstrate that XerA follows the classical cis-cleavage reaction, suggesting rearrangements of the C-terminal domain upon DNA binding. Surprisingly, XerA C-terminal αN helices dock in cis in a groove that, in bacterial tyrosine recombinases, accommodates in trans αN helices of neighbour monomers in the Holliday junction intermediates. Deletion of the XerA C-terminal αN helix does not impair cleavage of suicide substrates but prevents recombination catalysis. We propose that the enzymatic cycle of XerA involves the switch of the αN helix from cis to trans packing, leading to (i) repositioning of the catalytic Tyr in the active site in cis and (ii) dimer stabilisation via αN contacts in trans between monomers.

The carboxy-terminal αN helix of the archaeal XerA tyrosine recombinase is a molecular switch to control site-specific recombination.

Directory of Open Access Journals (Sweden)

Marie-Claude Serre

Full Text Available Tyrosine recombinases are conserved in the three kingdoms of life. Here we present the first crystal structure of a full-length archaeal tyrosine recombinase, XerA from Pyrococcus abyssi, at 3.0 Å resolution. In the absence of DNA substrate XerA crystallizes as a dimer where each monomer displays a tertiary structure similar to that of DNA-bound Tyr-recombinases. Active sites are assembled in the absence of dif except for the catalytic Tyr, which is extruded and located equidistant from each active site within the dimer. Using XerA active site mutants we demonstrate that XerA follows the classical cis-cleavage reaction, suggesting rearrangements of the C-terminal domain upon DNA binding. Surprisingly, XerA C-terminal αN helices dock in cis in a groove that, in bacterial tyrosine recombinases, accommodates in trans αN helices of neighbour monomers in the Holliday junction intermediates. Deletion of the XerA C-terminal αN helix does not impair cleavage of suicide substrates but prevents recombination catalysis. We propose that the enzymatic cycle of XerA involves the switch of the αN helix from cis to trans packing, leading to (i repositioning of the catalytic Tyr in the active site in cis and (ii dimer stabilisation via αN contacts in trans between monomers.

Conformational analysis of the partially disordered measles virus N(TAIL)-XD complex by SDSL EPR spectroscopy.

Science.gov (United States)

Kavalenka, Aleh; Urbancic, Iztok; Belle, Valérie; Rouger, Sabrina; Costanzo, Stéphanie; Kure, Sandra; Fournel, André; Longhi, Sonia; Guigliarelli, Bruno; Strancar, Janez

2010-03-17

To characterize the structure of dynamic protein systems, such as partly disordered protein complexes, we propose a novel approach that relies on a combination of site-directed spin-labeled electron paramagnetic resonance spectroscopy and modeling of local rotation conformational spaces. We applied this approach to the intrinsically disordered C-terminal domain of the measles virus nucleoprotein (N(TAIL)) both free and in complex with the X domain (XD, aa 459-507) of the viral phosphoprotein. By comparing measured and modeled temperature-dependent restrictions of the side-chain conformational spaces of 12 SL cysteine-substituted N(TAIL) variants, we showed that the 490-500 region of N(TAIL) is prestructured in the absence of the partner, and were able to quantitatively estimate, for the first time to our knowledge, the extent of the alpha-helical sampling of the free form. In addition, we showed that the 505-525 region of N(TAIL) conserves a significant degree of freedom even in the bound form. The latter two findings provide a mechanistic explanation for the reported rather high affinity of the N(TAIL)-XD binding reaction. Due to the nanosecond timescale of X-band EPR spectroscopy, we were also able to monitor the disordering in the 488-525 region of N(TAIL), in particular the unfolding of the alpha-helical region when the temperature was increased from 281 K to 310 K. Copyright 2010 Biophysical Society. Published by Elsevier Inc. All rights reserved.

The visual corticostriatal loop through the tail of the caudate: Circuitry and function

Directory of Open Access Journals (Sweden)

Carol A Seger

2013-12-01

Full Text Available Although high level visual cortex projects to a specific region of the striatum, the tail of the caudate, and participates in corticostriatal loops, the function of this visual corticostriatal system is not well understood. This article first reviews what is known about the anatomy of the visual corticostriatal loop across mammals, including rodents, cats, monkeys, and humans. Like other corticostriatal systems, the visual corticostriatal system includes both closed loop components (recurrent projections that return to the originating cortical location and open loop components (projections that terminate in other neural regions. The article then reviews what previous empircal research has shown about the function of the tail of the caudate. The article finally addresses the possible functions of the closed and open loop connections of the visual loop in the context of theories and computational models of corticostriatal function.

Fluorescent fusion proteins of soluble guanylyl cyclase indicate proximity of the heme nitric oxide domain and catalytic domain.

Directory of Open Access Journals (Sweden)

Tobias Haase

Full Text Available BACKGROUND: To examine the structural organisation of heterodimeric soluble guanylyl cyclase (sGC Förster resonance energy transfer (FRET was measured between fluorescent proteins fused to the amino- and carboxy-terminal ends of the sGC beta1 and alpha subunits. METHODOLOGY/PRINCIPAL FINDINGS: Cyan fluorescent protein (CFP was used as FRET donor and yellow fluorescent protein (YFP as FRET acceptor. After generation of recombinant baculovirus, fluorescent-tagged sGC subunits were co-expressed in Sf9 cells. Fluorescent variants of sGC were analyzed in vitro in cytosolic fractions by sensitized emission FRET. Co-expression of the amino-terminally tagged alpha subunits with the carboxy-terminally tagged beta1 subunit resulted in an enzyme complex that showed a FRET efficiency of 10% similar to fluorescent proteins separated by a helix of only 48 amino acids. Because these findings indicated that the amino-terminus of the alpha subunits is close to the carboxy-terminus of the beta1 subunit we constructed fusion proteins where both subunits are connected by a fluorescent protein. The resulting constructs were not only fluorescent, they also showed preserved enzyme activity and regulation by NO. CONCLUSIONS/SIGNIFICANCE: Based on the ability of an amino-terminal fragment of the beta1 subunit to inhibit activity of an heterodimer consisting only of the catalytic domains (alphacatbetacat, Winger and Marletta (Biochemistry 2005, 44:4083-90 have proposed a direct interaction of the amino-terminal region of beta1 with the catalytic domains. In support of such a concept of "trans" regulation of sGC activity by the H-NOX domains our results indicate that the domains within sGC are organized in a way that allows for direct interaction of the amino-terminal regulatory domains with the carboxy-terminal catalytic region. In addition, we constructed "fluorescent-conjoined" sGC's by fusion of the alpha amino-terminus to the beta1 carboxy-terminus leading to a

Emission inventory estimation of an intercity bus terminal.

Science.gov (United States)

Qiu, Zhaowen; Li, Xiaoxia; Hao, Yanzhao; Deng, Shunxi; Gao, H Oliver

2016-06-01

Intercity bus terminals are hotspots of air pollution due to concentrated activities of diesel buses. In order to evaluate the bus terminals' impact on air quality, it is necessary to estimate the associated mobile emission inventories. Since the vehicles' operating condition at the bus terminal varies significantly, conventional calculation of the emissions based on average emission factors suffers the loss of accuracy. In this study, we examined a typical intercity bus terminal-the Southern City Bus Station of Xi'an, China-using a multi-scale emission model-(US EPA's MOVES model)-to quantity the vehicle emission inventory. A representative operating cycle for buses within the station is constructed. The emission inventory was then estimated using detailed inputs including vehicle ages, operating speeds, operating schedules, and operating mode distribution, as well as meteorological data (temperature and humidity). Five functional areas (bus yard, platforms, disembarking area, bus travel routes within the station, and bus entrance/exit routes) at the terminal were identified, and the bus operation cycle was established using the micro-trip cycle construction method. Results of our case study showed that switching to compressed natural gas (CNG) from diesel fuel could reduce PM2.5 and CO emissions by 85.64 and 6.21 %, respectively, in the microenvironment of the bus terminal. When CNG is used, tail pipe exhaust PM2.5 emission is significantly reduced, even less than brake wear PM2.5. The estimated bus operating cycles can also offer researchers and policy makers important information for emission evaluation in the planning and design of any typical intercity bus terminals of a similar scale.

Tailings management at Nabarlek

International Nuclear Information System (INIS)

Waggitt, P.

1989-01-01

As the entire uranium deposit at Nabarlek was mined in 1979, the mine pit was available as a tailing's repository from the time of commencement of ore processing. In the early years Nabarlek's tailings were deposited subaqueously. In 1985 the tailings deposition method was changed to a sub-aerial, or semi-dry, method. Over the subsequent three years there was evidence that the tailings settled further and squeezed water from lower layers. The water was pumped away and treated for removal of radium before being evaporated in one of the mine's evaporation ponds. When milling was completed in 1988 it was decided to try and increase the rate of water removal and so obtain even greater consolidation of the trailings in a shorter time. This was achieved by loading the tailings with a layer of screened leached sands and waste rock placed on a layer of geotextile filter fabric that had been laid over the whole of the tailings surface in the pit. Once this was completed a modified piling rig was used to insert vertical drains, or wicks, up to 30 metres into the tailings. The drains were placed on a square grid at a spacing of 3.25 metres. Water that was forced out of the tailings by the downward pressure of the sand and rock could flow freely to the surface up these drains. Once at the surface the water was gathered into a sump and pumped away for treatment as before. The drains are working very well at present although it will be some considerable time before the water stops flowing. Already settlement of the tailings is apparent and the settled density of the material is increasing. As far as is known this is the first time that such a system has been employed on mine tailings in a pit in this way

Bioassay for uranium mill tailings

International Nuclear Information System (INIS)

Tschaeche, A.N.

1986-01-01

Uranium mill tailings are composed of fine sand that contains, among other things, some uranium (U/sup 238/ primarily), and all of the uranium daughters starting with /sup 230/Th that are left behind after the usable uranium is removed in the milling process. Millions of pounds of tailings are and continue to be generated at uranium mills around the United States. Discrete uranium mill tailings piles exist near the mills. In addition, the tailings materials were used in communities situated near mill sites for such purposes as building materials, foundations for buildings, pipe runs, sand boxes, gardens, etc. The Uranium Mill Tailings Remedial Action Project (UMTRAP) is a U.S. Department of Energy Program designed with the intention of removing or stabilizing the mill tailings piles and the tailings used to communities so that individuals are not exposed above the EPA limits established for such tailings materials. This paper discusses the bioassay programs that are established for workers who remove tailings from the communities in which they are placed

Cameco engineered tailings program: linking applied research with industrial processes for improved tailings performance

International Nuclear Information System (INIS)

Kotzer, T.G.

2010-01-01

'Full text:' Mine tailings at Cameco's operations are by-products of milling uranium ore having variable concentrations of uranium, metals, oxyanions and trace elements or elements of concern (EOC). Cameco has undertaken an Engineered Tailings (ET) program to optimize tailings performance and minimize environmental EOC impacts, regardless of the milled ore source. Applied geochemical and geotechnical tailings research is key within the ET program. In-situ drilling and experimental programs are used to understand long-term tailings behaviour and help validate source term predictions. Within this, the ET program proactively aids in the development of mill-based processes for production of tailings having improved long-term stability. (author)

Heavy tails of OLS

DEFF Research Database (Denmark)

Mikosch, Thomas Valentin; de Vries, Casper

2013-01-01

Suppose the tails of the noise distribution in a regression exhibit power law behavior. Then the distribution of the OLS regression estimator inherits this tail behavior. This is relevant for regressions involving financial data. We derive explicit finite sample expressions for the tail probabili...

Tailings neutralization and other alternatives for immobilizing toxic materials in tailings. Final report

International Nuclear Information System (INIS)

Opitz, B.E.; Sherwood, D.R.; Dodson, M.E.; Serne, R.J.

1985-09-01

This document, ''Tailing Neutralization and Other Alternatives for Immobilizing Toxic Materials in Tailings,'' is the final report in a series of six. It summarizes research completed since the beginning of the project. Three subtasks are included: Subtask A - Neutralization Methods Selection; Subtask B - Laboratory Analysis; and Subtask C - Field Testing. Subtask A reviews treatment processes from other industries to evaluate whether current waste technology from other fields is applicable to the uranium industry. This task also identifies several reagents that were tested for their effectiveness in treating acidic tailings and tailings solution in order to immobilize the contaminants associated with the acid waste. Subtask B describes the laboratory batch and column treatment studies performed on solid waste tailings and tailings solutions over the course of the project. The evaluation of several reagents identified in Subtask A was based on three criteria: (1) treated effluent water quality; (2) neutralized sludge handling and hydraulic properties; and (3) reagent costs and acid neutralizing efficiency. Subtask C presents a field demonstration plan that will evaluate the effectiveness, costs, and benefits of neutralizing acidic uranium mill tailings solution to reduce the potential leaching of toxic trace metals, radionuclides, and macro ions from a tailings impoundment. Details of the related research can be found in the documents listed in the ''Previous Documents in Series.'' 43 refs., 9 figs., 46 tabs

Lateral movements of a massive tail influence gecko locomotion: an integrative study comparing tail restriction and autotomy.

Science.gov (United States)

Jagnandan, Kevin; Higham, Timothy E

2017-09-07

Tails are an intricate component of the locomotor system for many vertebrates. Leopard geckos (Eublepharis macularius) possess a large tail that is laterally undulated during steady locomotion. However, the tail is readily shed via autotomy, resulting in the loss of tail function, loss in body mass, and a cranial shift in the center of mass. To elucidate the function of tail undulations, we investigated changes in limb kinematics after manipulating the tail artificially by restricting tail undulations and naturally by removing the tail via autotomy. Restricting tail undulations resulted in kinematic adjustments similar to those that occur following tail autotomy, characterized by more flexed hind limb joints. These data suggest that effects of autotomy on locomotion may be linked to the loss of tail movements rather than the loss of mass or a shift in center of mass. We also provide empirical support for the link between lateral tail undulations and step length through the rotation of the pelvic girdle and retraction of the femur. Restriction and autotomy of the tail limits pelvic rotation, which reduces femur retraction and decreases step length. Our findings demonstrate a functional role for tail undulations in geckos, which likely applies to other terrestrial vertebrates.

Injurious tail biting in pigs

DEFF Research Database (Denmark)

D'Eath, R.B.; Amott, G.; Turner, S. P.

2014-01-01

not allow tail docking at all. Against this background, using a novel approach focusing on research where tail injuries were quantified, we review the measures that can be used to control tail biting in pigs without tail docking. Using this strict criterion, there was good evidence that manipulable...... substrates and feeder space affect damaging tail biting. Only epidemiological evidence was available for effects of temperature and season, and the effect of stocking density was unclear. Studies suggest that group size has little effect, and the effects of nutrition, disease and breed require further...... underlying processes of tail biting. A quantitative comparison of the efficacy of different methods of provision of manipulable materials, and a review of current practices in countries and assurance schemes where tail docking is banned, both suggest that daily provision of small quantities of destructible...

Lateral movements of a massive tail influence gecko locomotion: an integrative study comparing tail restriction and autotomy

OpenAIRE

Jagnandan, Kevin; Higham, Timothy E.

2017-01-01

Tails are an intricate component of the locomotor system for many vertebrates. Leopard geckos (Eublepharis macularius) possess a large tail that is laterally undulated during steady locomotion. However, the tail is readily shed via autotomy, resulting in the loss of tail function, loss in body mass, and a cranial shift in the center of mass. To elucidate the function of tail undulations, we investigated changes in limb kinematics after manipulating the tail artificially by restricting tail un...

Analysis of Geological, Mechanical and Characteristics of Aggregates Used in Tailings Ponds

Directory of Open Access Journals (Sweden)

G. Ertugrul

2017-01-01

Full Text Available Increasing social demand, economic developments, consumption fluctuations, urbanization, industrialization, modernization, population growth and technical needs have resulted due toincrease in the production of natural resources throughout the world. However, there is a less importance focused on the environmental regulations. Waste water is one of the environmental problemsthatmining activities may cause. It contains a lot of solid and liquid contaminants.Aggregatesare found among the most abundant ones in natural resources. They are obtained from river basins, sea and lake edges, quarries and industries as by products and waste. During mining activities or terminated mining activities, these materials are used in the creation of stability, impermeability and settlement of tailings dam. In this paper, construction of tailings pond by using aggregates are given in detail together with their classification, particle stability, particle shape, particle size, particle texture, covered in minerals of particle, particle porosity and trending to chemical reactivity of aggregates.

CDKL5 expression is modulated during neuronal development and its subcellular distribution is tightly regulated by the C-terminal tail.

Science.gov (United States)

Rusconi, Laura; Salvatoni, Lisa; Giudici, Laura; Bertani, Ilaria; Kilstrup-Nielsen, Charlotte; Broccoli, Vania; Landsberger, Nicoletta

2008-10-31

Mutations in the human X-linked cyclin-dependent kinase-like 5 (CDKL5) gene have been identified in patients with Rett syndrome (RTT), West syndrome, and X-linked infantile spasms, sharing the common feature of mental retardation and early seizures. CDKL5 is a rather uncharacterized kinase, but its involvement in RTT seems to be explained by the fact that it works upstream of MeCP2, the main cause of Rett syndrome. To understand the role of this kinase for nervous system functions and to address if molecular mechanisms are involved in regulating its distribution and activity, we studied the ontogeny of CDKL5 expression in developing mouse brains by immunostaining and Western blotting. The expression profile of CDKL5 was compared with that of MeCP2. The two proteins share a general expression profile in the adult mouse brain, but CDKL5 levels appear to be highly modulated at the regional level. Its expression is strongly induced in early postnatal stages, and in the adult brain CDKL5 is present in mature neurons, but not in astroglia. Interestingly, the presence of CDKL5 in the cell nucleus varies at the regional level of the adult brain and is developmentally regulated. CDKL5 shuttles between the cytoplasm and the nucleus and the C-terminal tail is involved in localizing the protein to the cytoplasm in a mechanism depending on active nuclear export. Accordingly, Rett derivatives containing disease-causing truncations of the C terminus are constitutively nuclear, suggesting that they might act as gain of function mutations in this cellular compartment.

Removal of histone tails from nucleosome dissects the physical mechanisms of salt-induced aggregation, linker histone H1-induced compaction, and 30-nm fiber formation of the nucleosome array

International Nuclear Information System (INIS)

Hizume, Kohji; Nakai, Tonau; Araki, Sumiko; Prieto, Eloise; Yoshikawa, Kenichi; Takeyasu, Kunio

2009-01-01

In order to reveal the roles of histone tails in the formation of higher-order chromatin structures, we employed atomic force microscopy (AFM), and an in vitro reconstitution system to examine the properties of reconstituted chromatin composed of tail-less histones and a long DNA (106-kb plasmid) template. The tail-less nucleosomes did not aggregate at high salt concentrations or with an excess amount of core histones, in contrast with the behavior of nucleosomal arrays composed of nucleosomes containing normal, N-terminal tails. Analysis of our nucleosome distributions reveals that the attractive interaction between tail-less nucleosomes is weakened. Addition of linker histone H1 into the tail-less nucleosomal array failed to promote the formation of 30 nm chromatin fibers that are usually formed in the normal nucleosomal array. These results demonstrate that the attractive interaction between nucleosomes via histone tails plays a critical role in the formation of the uniform 30-nm chromatin fiber.

Performance Comparison between Neutralization Tailings and Flotation Tailings Used for Backfill Mix and Mechanism Analysis

OpenAIRE

Han, Bin; Sun, Wei; Yu, Shaofeng; Liu, Chao; Yao, Song; Wu, Jianxun

2016-01-01

A comparison test of different tailings used for underground backfill was conducted, using neutralized tailings from BIOX and flotation tailings of Jinfeng Mine. Laboratory comparison test results show that, with neutralized tailings, when the cement dosage is at 19%, backfill UCS after 7 days, 14 days, and 28 days are 105%–163%, 80%–102%, and 33%–43%, respectively, which are higher than those of flotation tailings. When the cement dosage is at 12%, backfill UCS after 7 days, 14 days, and 28 ...

Frost evolution in tailings

International Nuclear Information System (INIS)

1991-04-01

A review was carried out on the physical and thermal mechanisms of permafrost evaluation in soils and uranium tailings. The primary mechanism controlling permafrost evolution is conductive heat transfer with the latent heat of fusion of water being liberated as phase change occurs. Depending on the soil properties and freezing rate, pore water can be expelled from the frost front or pore water can migrate towards the frost front. Solute redistribution may occur as the frost front penetrates into the soil. The rate of frost penetration is a function of the thermal properties of the tailings and the climatic conditions. Computer modelling programmes capable of modelling permafrost evolution were reviewed. The GEOTHERM programme was selected as being the most appropriate for this study. The GEOTHERM programme uses the finite element method of thermal analysis. The ground surface temperature is determined by solving the energy balance equations a the ground surface. The GEOTHERM programme was used to simulate the permafrost evolution in the Key Lake Mine tailings located in north central Saskatchewan. The analyses indicated that the existing frozen zones in the tailing pond will eventually thaw if an average snow depth covers the tailings. Hundreds of years are required to thaw the tailings. If minimal snow cover is present the extent of the frozen zone in the tailings will increase

Development of a cysteine-deprived and C-terminally truncated GLP-1 receptor

DEFF Research Database (Denmark)

Underwood, Christina Rye; Knudsen, Lotte Bjerre; Garibay, Patrick W.

2013-01-01

The glucagon-like peptide-1 receptor (GLP-1R) belongs to family B of the G-protein coupled receptors (GPCRs), and has become a promising target for the treatment of type 2 diabetes. Here we describe the development and characterization of a fully functional cysteine-deprived and C......-terminally truncated GLP-1R. Single cysteines were initially substituted with alanine, and functionally redundant cysteines were subsequently changed simultaneously. Our results indicate that Cys174, Cys226, Cys296 and Cys403 are important for the GLP-1-mediated response, whereas Cys236, Cys329, Cys341, Cys347, Cys438...... that the membrane proximal part of the C-terminal is involved in receptor expression at the cell surface. The results show that seven cysteines and more than half of the C-terminal tail can be removed from GLP-1R without compromising GLP-1 binding or function....

Characterization of oils sands thickened tailings

Energy Technology Data Exchange (ETDEWEB)

Scott, J.D.; Jeeravipoolvarn, S.; Donahue, R.; Ozum, B. [Alberta Univ., Edmonton, AB (Canada). Dept. of Civil and Environmental Engineering

2008-07-01

This presentation discussed the characterization of oils sands thickened tailings. The problem statement was defined as the fact that many laboratory procedures to characterize fine tailings do not take into account the extraction process, and instead use standardized laboratory tests. The purpose of this presentation was to demonstrate how different extraction processes affect the fine tailings geotechnical properties and water chemistry. Properties that were characterized included particle size analysis from hydrometer-sieve tests; per cent clay from methylene blue tests; per cent clay from mineralogy tests; Atterberg limits; water chemistry; and morphology by scanning electron microscopy. The presentation discussed the origin of fines (silt and clay) in tailings; where fine particles come from; tailings materials; mineralogy of tailings; the hydrometer-sieve test on fine tailings and thickened tailings; and the methylene blue test. It was concluded that the great majority of clay minerals in the tailings come from the clay-shale discontinuous seams and layers. For thickened tailings, the dispersed and non-dispersed hydrometer tests show considerable difference in the amount of clay size material. tabs., figs.

Ethanol extract grapefruit peel ( Citrus maxima Murr.) gel formulations with gelling agent durian seed gum and carboxy methyl cellulose

OpenAIRE

Nazliniwaty; Karsono; Zebua, Nilsya Febrika; Nerdy

2017-01-01

This research aims to investigate the best gel formula of grapefruit ethanol extracts (Citrus maxima Murr.) with gelling agent combination durian seed gum and carboxy methyl cellulose (CMC). Durian seed gum was isolated with centrifuge and then combined with CMC-Na in five formulas. Evaluation material of topical gel that is its homogeneity, pH, stability testing, and irritation of the volunteers. All formula gel preparations its ...

Electro-remediation of copper mine tailings. Comparing copper removal efficiencies for two tailings of different age

DEFF Research Database (Denmark)

Hansen, Henrik K.; Lamas, Victor; Gutierrez, Claudia

2013-01-01

This work compares and evaluates the copper removal efficiency when applying electric fields to two mine tailings originating from the same mine but of different age. Eight experiments were carried out - four on tailings deposited more than 20 years ago (old tailings) and four on tailings deposit...

Uranium mill tailings management

International Nuclear Information System (INIS)

1982-01-01

Facilities for the disposal of uranium mill tailings will invariably be subjected to geomorphological and climatological influences in the long-term. Proceedings of a workshop discuss how the principles of geomorphology can be applied to the siting, design, construction, decommissioning and rehabilitation of disposal facilities in order to provide for long-term containment and stability of tailings. The characteristics of tailings and their behaviour after disposal influence the potential impacts which might occur in the long-term. Proceedings of another workshop examine the technologies for uranium ore processing and tailings conditioning with a view to identifying improvements that could be made in such characteristics

Mine tailings disposal

International Nuclear Information System (INIS)

Gonzales, P.A.; Adams, B.J.

1980-06-01

The hydrologic evaluation of mine tailings disposal sites after they are abandoned is considered in relation to their potential environmental impact on a long term basis. There is a direct relation between the amounts and types of water leaving a disposal site and the severity of the potential damage to the environment. The evaluation of the relative distribution of the precipitation reaching the ground into evaporation, runoff and infiltration is obtained for a selected site and type of tailings material whose characteristics and physical properties were determined in the soils laboratory. A conceptual model of the hydrologic processes involved and the corresponding mathematical model were developed to simulate the physical system. A computer program was written to solve the set of equations forming the mathematical model, considering the physical properties of the tailings and the rainfall data selected. The results indicate that the relative distribution of the precipitation depends on the surface and upper layer of the tailings and that the position of the groundwater table is governed by the flow through the bottom of the profile considered. The slope of the surface of the mass of tailings was found to be one of the principal factors affecting the relative distribution of precipitation and, therefore, the potential pollution of the environment

TIDAL TAILS OF MINOR MERGERS. II. COMPARING STAR FORMATION IN THE TIDAL TAILS OF NGC 2782

Energy Technology Data Exchange (ETDEWEB)

Knierman, Karen A.; Scowen, Paul; Veach, Todd; Groppi, Christopher [School of Earth and Space Exploration, Arizona State University, 550 E. Tyler Mall, Room PSF-686 (P.O. Box 871404), Tempe, AZ 85287-1404 (United States); Mullan, Brendan; Charlton, Jane [Department of Astronomy and Astrophysics, Penn State University, 525 Davey Lab, University Park, PA (United States); Konstantopoulos, Iraklis [Australian Astronomical Observatory, P.O. Box 915, North Ryde NSW 1670 (Australia); Knezek, Patricia M., E-mail: karen.knierman@asu.edu, E-mail: paul.scowen@asu.edu, E-mail: tveach@asu.edu, E-mail: cgroppi@asu.edu, E-mail: mullan@astro.psu.edu, E-mail: iraklis@aao.gov.au, E-mail: pknezek@noao.edu [WIYN Consortium, Inc., 950 N. Cherry Avenue, Tucson, AZ 85719 (United States)

2013-09-10

The peculiar spiral NGC 2782 is the result of a minor merger with a mass ratio {approx}4: 1 occurring {approx}200 Myr ago. This merger produced a molecular and H I-rich, optically bright eastern tail and an H I-rich, optically faint western tail. Non-detection of CO in the western tail by Braine et al. suggested that star formation had not yet begun. However, deep UBVR and H{alpha} narrowband images show evidence of recent star formation in the western tail, though it lacks massive star clusters and cluster complexes. Using Herschel PACS spectroscopy, we discover 158 {mu}m [C II] emission at the location of the three most luminous H{alpha} sources in the eastern tail, but not at the location of the even brighter H{alpha} source in the western tail. The western tail is found to have a normal star formation efficiency (SFE), but the eastern tail has a low SFE. The lack of CO and [C II] emission suggests that the western tail H II region may have a low carbon abundance and be undergoing its first star formation. The western tail is more efficient at forming stars, but lacks massive clusters. We propose that the low SFE in the eastern tail may be due to its formation as a splash region where gas heating is important even though it has sufficient molecular and neutral gas to make massive star clusters. The western tail, which has lower gas surface density and does not form high-mass star clusters, is a tidally formed region where gravitational compression likely enhances star formation.

TIDAL TAILS OF MINOR MERGERS. II. COMPARING STAR FORMATION IN THE TIDAL TAILS OF NGC 2782

International Nuclear Information System (INIS)

Knierman, Karen A.; Scowen, Paul; Veach, Todd; Groppi, Christopher; Mullan, Brendan; Charlton, Jane; Konstantopoulos, Iraklis; Knezek, Patricia M.

2013-01-01

The peculiar spiral NGC 2782 is the result of a minor merger with a mass ratio ∼4: 1 occurring ∼200 Myr ago. This merger produced a molecular and H I-rich, optically bright eastern tail and an H I-rich, optically faint western tail. Non-detection of CO in the western tail by Braine et al. suggested that star formation had not yet begun. However, deep UBVR and Hα narrowband images show evidence of recent star formation in the western tail, though it lacks massive star clusters and cluster complexes. Using Herschel PACS spectroscopy, we discover 158 μm [C II] emission at the location of the three most luminous Hα sources in the eastern tail, but not at the location of the even brighter Hα source in the western tail. The western tail is found to have a normal star formation efficiency (SFE), but the eastern tail has a low SFE. The lack of CO and [C II] emission suggests that the western tail H II region may have a low carbon abundance and be undergoing its first star formation. The western tail is more efficient at forming stars, but lacks massive clusters. We propose that the low SFE in the eastern tail may be due to its formation as a splash region where gas heating is important even though it has sufficient molecular and neutral gas to make massive star clusters. The western tail, which has lower gas surface density and does not form high-mass star clusters, is a tidally formed region where gravitational compression likely enhances star formation

THE NARROW X-RAY TAIL AND DOUBLE Hα TAILS OF ESO 137-002 IN A3627

International Nuclear Information System (INIS)

Zhang, B.; Lin, X. B.; Kong, X.; Sun, M.; Ji, L.; Sarazin, C.; Nulsen, P. E. J.; Forman, W.; Jones, C.; Roediger, E.; Donahue, M.; Voit, G. M.

2013-01-01

We present the analysis of a deep Chandra observation of a ∼2 L * late-type galaxy, ESO 137-002, in the closest rich cluster A3627. The Chandra data reveal a long (∼>40 kpc) and narrow tail with a nearly constant width (∼3 kpc) to the southeast of the galaxy, and a leading edge ∼1.5 kpc from the galaxy center on the upstream side of the tail. The tail is most likely caused by the nearly edge-on stripping of ESO 137-002's interstellar medium (ISM) by ram pressure, compared to the nearly face-on stripping of ESO 137-001 discussed in our previous work. Spectral analysis of individual regions along the tail shows that the gas throughout it has a rather constant temperature, ∼1 keV, very close to the temperature of the tails of ESO 137-001, if the same atomic database is used. The derived gas abundance is low (∼0.2 solar with the single-kT model), an indication of the multiphase nature of the gas in the tail. The mass of the X-ray tail is only a small fraction (<5%) of the initial ISM mass of the galaxy, suggesting that the stripping is most likely at an early stage. However, with any of the single-kT, double-kT, and multi-kT models we tried, the tail is always 'over-pressured' relative to the surrounding intracluster medium (ICM), which could be due to the uncertainties in the abundance, thermal versus non-thermal X-ray emission, or magnetic support in the ICM. The Hα data from the Southern Observatory for Astrophysical Research show a ∼21 kpc tail spatially coincident with the X-ray tail, as well as a secondary tail (∼12 kpc long) to the east of the main tail diverging at an angle of ∼23° and starting at a distance of ∼7.5 kpc from the nucleus. At the position of the secondary Hα tail, the X-ray emission is also enhanced at the ∼2σ level. We compare the tails of ESO 137-001 and ESO 137-002, and also compare the tails to simulations. Both the similarities and differences of the tails pose challenges to the simulations. Several implications are

Tailings management best practice: a case study of the McClean Lake JEB Tailings Management Facility

International Nuclear Information System (INIS)

Tremblay, M.A.J.; Rowson, J.

2005-01-01

COGEMA Resources Inc. (which is part of the Areva Group) is a Canadian company with its head office in Saskatoon, Saskatchewan. It owns and operates mining and milling facilities in Northern Saskatchewan, which produce uranium concentrate. McClean Lake Operation commenced production in 1999 and its tailings management facility represents the state of the art for tailings management in the uranium industry in Canada. Tailings disposal has the potential to cause effects in the surrounding receiving environment primarily through migration of soluble constituents from the facility to surface water receptors. In-pit disposal or mill tailings has become the standard in the uranium mining industry in Northern Saskatchewan. This method or tailings management demonstrates advances in terms of worker radiation protection and containment of soluble constituents both during operations and into the long term. Sub-aqueous deposition of tailings protects personnel from exposure to radiation and airborne emissions and prevents freezing of tailings, which can hinder consolidation. The continuous inflow of groundwater to the facility is achieved during operations, through control of water levels within the facility. This ensures hydrodynamic containment, which prevents migration of soluble radionuclides and heavy metals into the surrounding aquifer during operations. The environmental performance of the decommissioned facility depends upon the rate of release of contaminants to the receiving environment. The rate of constituent loading to the receiving environment will ultimately be governed by the concentrations of soluble constituents within the tailings mass, the mechanisms for release from the tailings to the surrounding groundwater system, and transport of constituents within the groundwater pathway to the receiving environment. The tailings preparation process was designed to convert arsenic into a stable form to reduce soluble concentrations within the tailings mass. The

Settlement of uranium mill tailings

International Nuclear Information System (INIS)

Chen, P.K.; Guros, F.B.; Keshian, B.

1988-01-01

Two test embankments were constructed on top of an old tailings deposit near Ambrosia Lake, New Mexico to determine settlement characteristics of hydraulically- deposited uranium mill tailings. Before construction of the embankments, properties of in-situ tailings and foundation soils were determined using data from boreholes, piezocone soundings, and laboratory tests. These properties were used to estimate post-construction settlement of a planned disposal embankment to be constructed on the tailings. However, excessive uncertainty existed in the following: field settlement rates of saturated and unsaturated tailings, degree of preconsolidation of the upper 15 feet of tailings, and the ability of an underlying silty sand foundation layer to facilitate drainage. Thus, assurance could not be provided that differential settlements of the radon barrier and erosion protection layers would be within allowable limits should the planned disposal embankment be constructed in a single-stage

Resolution, configurational assignment, and enantiopharmacology at glutamate receptors of 2-amino-3-(3-carboxy-5-methyl-4-isoxazolyl)propionic acid (ACPA) and demethyl-ACPA

DEFF Research Database (Denmark)

Johansen, T N; Stensbøl, T B; Nielsen, B

2001-01-01

We have previously described (RS)-2-amino-3-(3-carboxy-5-methyl-4-isoxazolyl)propionic acid (ACPA) as a potent agonist at the (RS)-2-amino-3-(3-hydroxy-5-methyl-4-isoxazolyl)propionic acid (AMPA) receptor subtype of (S)-glutamic acid (Glu) receptors. We now report the chromatographic resolution...... of ACPA and (RS)-2-amino-3-(3-carboxy-4-isoxazolyl)propionic acid (demethyl-ACPA) using a Sumichiral OA-5000 column. The configuration of the enantiomers of both compounds have been assigned based on X-ray crystallographic analyses, supported by circular dichroism spectra and elution orders on chiral HPLC...... columns. Furthermore, the enantiopharmacology of ACPA and demethyl-ACPA was investigated using radioligand binding and cortical wedge electrophysiological assay systems and cloned metabotropic Glu receptors. (S)-ACPA showed high affinity in AMPA binding (IC(50) = 0.025 microM), low affinity in kainic acid...

Elastic neutron scattering of dry and rehydrated trehalose coated carboxy-myoglobin

International Nuclear Information System (INIS)

Librizzi, Fabio; Vitrano, Eugenio; Paciaroni, Alessandro; Cordone, Lorenzo

2008-01-01

We report here a comparison between the hydrogen atoms mean square displacements measured by elastic neutron scattering on trehalose coated carboxy-myoglobin, at ILL on the backscattering spectrometers IN13 and IN16. An inconsistency is observed when comparing the mean square displacements measured on the two spectrometer, on samples of identical composition, since they resulted of larger amplitude on IN13 (either in condition of drought or after overnight rehydration under 75% D 2 O atmosphere), notwithstanding the lower time window accessible on this instrument with respect to IN16. Such inconsistency disappears when the data obtained on this last spectrometer are analyzed in two separate ranges of the exchanged wave vector q. The analysis of the data collected on IN13 in terms of the two-well model [W. Doster, S. Cusak, W. Petry, Nature 337 (1989) 754] gives relevant information on the enthalpy and entropy values involved in the interconversion among substates in dry and rehydrated trehalose coated protein samples

Elastic neutron scattering of dry and rehydrated trehalose coated carboxy-myoglobin

Energy Technology Data Exchange (ETDEWEB)

Librizzi, Fabio; Vitrano, Eugenio [Dipartimento di Scienze Fisiche e Astronomiche and CNISM, Universita di Palermo, Via Archirafi 36, I-90123 Palermo (Italy); Paciaroni, Alessandro [Dipartimento di Fisica dell' Universita di Perugia, INFM-CRS SOFT and CEMIN - Centro di Eccellenza per i Materiali Innovativi e Nanostrutturati, Via A. Pascoli, I-06123 Perugia (Italy); Cordone, Lorenzo [Dipartimento di Scienze Fisiche e Astronomiche and CNISM, Universita di Palermo, Via Archirafi 36, I-90123 Palermo (Italy)], E-mail: cordone@fisica.unipa.it

2008-04-18

We report here a comparison between the hydrogen atoms mean square displacements measured by elastic neutron scattering on trehalose coated carboxy-myoglobin, at ILL on the backscattering spectrometers IN13 and IN16. An inconsistency is observed when comparing the mean square displacements measured on the two spectrometer, on samples of identical composition, since they resulted of larger amplitude on IN13 (either in condition of drought or after overnight rehydration under 75% D{sub 2}O atmosphere), notwithstanding the lower time window accessible on this instrument with respect to IN16. Such inconsistency disappears when the data obtained on this last spectrometer are analyzed in two separate ranges of the exchanged wave vector q. The analysis of the data collected on IN13 in terms of the two-well model [W. Doster, S. Cusak, W. Petry, Nature 337 (1989) 754] gives relevant information on the enthalpy and entropy values involved in the interconversion among substates in dry and rehydrated trehalose coated protein samples.

Poly(amidoamine) dendrimers on lipid bilayers II: Effects of bilayer phase and dendrimer termination.

Science.gov (United States)

Kelly, Christopher V; Leroueil, Pascale R; Orr, Bradford G; Banaszak Holl, Mark M; Andricioaei, Ioan

2008-08-07

The molecular structures and enthalpy release of poly(amidoamine) (PAMAM) dendrimers binding to 1,2-dimyristoyl- sn-glycero-3-phosphocholine (DMPC) bilayers were explored through atomistic molecular dynamics. Three PAMAM dendrimer terminations were examined: protonated primary amine, neutral acetamide, and deprotonated carboxylic acid. Fluid and gel lipid phases were examined to extract the effects of lipid tail mobility on the binding of generation-3 dendrimers, which are directly relevant to the nanoparticle interactions involving lipid rafts, endocytosis, lipid removal, and/or membrane pores. Upon binding to gel phase lipids, dendrimers remained spherical, had a constant radius of gyration, and approximately one-quarter of the terminal groups were in close proximity to the lipids. In contrast, upon binding to fluid phase bilayers, dendrimers flattened out with a large increase in their asphericity and radii of gyration. Although over twice as many dendrimer-lipid contacts were formed on fluid versus gel phase lipids, the dendrimer-lipid interaction energy was only 20% stronger. The greatest enthalpy release upon binding was between the charged dendrimers and the lipid bilayer. However, the stronger binding to fluid versus gel phase lipids was driven by the hydrophobic interactions between the inner dendrimer and lipid tails.

Layilin, a cell surface hyaluronan receptor, interacts with merlin and radixin

International Nuclear Information System (INIS)

Bono, Petri; Cordero, Etchell; Johnson, Kristen; Borowsky, Mark; Ramesh, Vijaya; Jacks, Tyler; Hynes, Richard O.

2005-01-01

Layilin is a widely expressed integral membrane hyaluronan receptor, originally identified as a binding partner of talin located in membrane ruffles. We have identified merlin, the neurofibromatosis type 2 tumor suppressor protein and radixin, as other interactors with the carboxy-terminal domain of layilin. We show that the carboxy-terminal domain of layilin is capable of binding to the amino-terminal domain of radixin. An interdomain interaction between the amino- and the carboxy-terminal domains of radixin inhibits its ability to bind to layilin. In the presence of acidic phospholipids, the interdomain interaction of radixin is inhibited and layilin can bind to full-length radixin. In contrast, layilin binds both full-length and amino-terminal merlin-GST fusion proteins without a requirement for phospholipids. Furthermore, layilin antibody can immunoprecipitate merlin, confirming association in vivo between these two proteins, which also display similar subcellular localizations in ruffling membranes. No interaction was observed between layilin and ezrin or layilin and moesin. These findings expand the known binding partners of layilin to include other members of the talin/band 4.1/ERM (ezrin, radixin, and moesin) family of cytoskeletal-membrane linker molecules. This in turn suggests that layilin may mediate signals from extracellular matrix to the cell cytoskeleton via interaction with different intracellular binding partners and thereby be involved in the modulation of cortical structures in the cell

Attitudes of Dutch Pig Farmers Towards Tail Biting and Tail Docking

NARCIS (Netherlands)

Bracke, M.B.M.; Lauwere, de C.C.; Wind, S.M.M.; Zonderland, J.J.

2013-01-01

The Dutch policy objective of a fully sustainable livestock sector without mutilations by 2023 is not compatible with the routine practice of tail docking to minimize the risk of tail biting. To examine farmer attitudes towards docking, a telephone survey was conducted among 487 conventional and 33

Tail-weighted dependence measures with limit being the tail dependence coefficient

KAUST Repository

Lee, David

2017-12-02

For bivariate continuous data, measures of monotonic dependence are based on the rank transformations of the two variables. For bivariate extreme value copulas, there is a family of estimators (Formula presented.), for (Formula presented.), of the extremal coefficient, based on a transform of the absolute difference of the α power of the ranks. In the case of general bivariate copulas, we obtain the probability limit (Formula presented.) of (Formula presented.) as the sample size goes to infinity and show that (i) (Formula presented.) for (Formula presented.) is a measure of central dependence with properties similar to Kendall\\'s tau and Spearman\\'s rank correlation, (ii) (Formula presented.) is a tail-weighted dependence measure for large α, and (iii) the limit as (Formula presented.) is the upper tail dependence coefficient. We obtain asymptotic properties for the rank-based measure (Formula presented.) and estimate tail dependence coefficients through extrapolation on (Formula presented.). A data example illustrates the use of the new dependence measures for tail inference.

Tail-weighted dependence measures with limit being the tail dependence coefficient

KAUST Repository

Lee, David; Joe, Harry; Krupskii, Pavel

2017-01-01

For bivariate continuous data, measures of monotonic dependence are based on the rank transformations of the two variables. For bivariate extreme value copulas, there is a family of estimators (Formula presented.), for (Formula presented.), of the extremal coefficient, based on a transform of the absolute difference of the α power of the ranks. In the case of general bivariate copulas, we obtain the probability limit (Formula presented.) of (Formula presented.) as the sample size goes to infinity and show that (i) (Formula presented.) for (Formula presented.) is a measure of central dependence with properties similar to Kendall's tau and Spearman's rank correlation, (ii) (Formula presented.) is a tail-weighted dependence measure for large α, and (iii) the limit as (Formula presented.) is the upper tail dependence coefficient. We obtain asymptotic properties for the rank-based measure (Formula presented.) and estimate tail dependence coefficients through extrapolation on (Formula presented.). A data example illustrates the use of the new dependence measures for tail inference.

Copper tailings in stucco mortars

Directory of Open Access Journals (Sweden)

Osvaldo Pavez

Full Text Available Abstract This investigation addressed the evaluation of the use of copper tailings in the construction industry in order to reduce the impact on the environment. The evaluation was performed by a technical comparison between stucco mortars prepared with crushed conventional sand and with copper tailings sand. The best results were achieved with the stucco mortars containing tailings. The tailings presented a fine particles size distribution curve different from that suggested by the standard. The values of compressive strength, retentivity, and adherence in the stucco mortars prepared with copper tailings were much higher than those obtained with crushed sand. According to the results from this study, it can be concluded that the preparation of stucco mortars using copper tailings replacing conventional sand is a technically feasible alternative for the construction industry, presenting the benefit of mitigating the impact of disposal to the environment.

Research on Long Tail Recommendation Algorithm

Science.gov (United States)

Hu, Xuezhi; Zhang, Chuang; Wu, Ming; Zeng, Yang

2017-10-01

Most recommendation systems in the major electronic commerce platforms are influenced by the long tail effect more or less. There are sufficient researches of how to assess recommendation effect while no criteria to evaluate long tail recommendation rate. In this study, we first discussed the existing problems of recommending long tail products through specific experiments. Then we proposed a long tail evaluation criteria and compared the performance in long tail recommendation between different models.

Multiplex N-terminome analysis of MMP-2 and MMP-9 substrate degradomes by iTRAQ-TAILS quantitative proteomics.

Science.gov (United States)

Prudova, Anna; auf dem Keller, Ulrich; Butler, Georgina S; Overall, Christopher M

2010-05-01

Proteolysis is a major protein posttranslational modification that, by altering protein structure, affects protein function and, by truncating the protein sequence, alters peptide signatures of proteins analyzed by proteomics. To identify such modified and shortened protease-generated neo-N-termini on a proteome-wide basis, we developed a whole protein isobaric tag for relative and absolute quantitation (iTRAQ) labeling method that simultaneously labels and blocks all primary amines including protein N- termini and lysine side chains. Blocking lysines limits trypsin cleavage to arginine, which effectively elongates the proteolytically truncated peptides for improved MS/MS analysis and peptide identification. Incorporating iTRAQ whole protein labeling with terminal amine isotopic labeling of substrates (iTRAQ-TAILS) to enrich the N-terminome by negative selection of the blocked mature original N-termini and neo-N-termini has many advantages. It enables simultaneous characterization of the natural N-termini of proteins, their N-terminal modifications, and proteolysis product and cleavage site identification. Furthermore, iTRAQ-TAILS also enables multiplex N-terminomics analysis of up to eight samples and allows for quantification in MS2 mode, thus preventing an increase in spectral complexity and extending proteome coverage by signal amplification of low abundance proteins. We compared the substrate degradomes of two closely related matrix metalloproteinases, MMP-2 (gelatinase A) and MMP-9 (gelatinase B), in fibroblast secreted proteins. Among 3,152 unique N-terminal peptides identified corresponding to 1,054 proteins, we detected 201 cleavage products for MMP-2 and unexpectedly only 19 for the homologous MMP-9 under identical conditions. Novel substrates identified and biochemically validated include insulin-like growth factor binding protein-4, complement C1r component A, galectin-1, dickkopf-related protein-3, and thrombospondin-2. Hence, N-terminomics analyses

Tail Asymptotics for the Sum of two Heavy-tailed Dependent Risks

DEFF Research Database (Denmark)

Albrecher, H.; Asmussen, Søren

Let X1,X2 denote positive exchangable heavy-tailed random variables with continuous marginal distribution function F. The asymptotic behavior of the tail of X1 + X2 is studied in a general copula framework and some bounds and extremal properties are provided. For more specific assumptions on F...

Runaway tails in magnetized plasmas

Science.gov (United States)

Moghaddam-Taaheri, E.; Vlahos, L.; Rowland, H. L.; Papadopoulos, K.

1985-01-01

The evolution of a runaway tail driven by a dc electric field in a magnetized plasma is analyzed. Depending on the strength of the electric field and the ratio of plasma to gyrofrequency, there are three different regimes in the evolution of the tail. The tail can be (1) stable with electrons accelerated to large parallel velocities, (2) unstable to Cerenkov resonance because of the depletion of the bulk and the formation of a positive slope, (3) unstable to the anomalous Doppler resonance instability driven by the large velocity anisotropy in the tail. Once an instability is triggered (Cerenkov or anomalous Doppler resonance) the tail relaxes into an isotropic distribution. The role of a convection type loss term is also discussed.

3' terminal diversity of MRP RNA and other human noncoding RNAs revealed by deep sequencing.

Science.gov (United States)

Goldfarb, Katherine C; Cech, Thomas R

2013-09-21

Post-transcriptional 3' end processing is a key component of RNA regulation. The abundant and essential RNA subunit of RNase MRP has been proposed to function in three distinct cellular compartments and therefore may utilize this mode of regulation. Here we employ 3' RACE coupled with high-throughput sequencing to characterize the 3' terminal sequences of human MRP RNA and other noncoding RNAs that form RNP complexes. The 3' terminal sequence of MRP RNA from HEK293T cells has a distinctive distribution of genomically encoded termini (including an assortment of U residues) with a portion of these selectively tagged by oligo(A) tails. This profile contrasts with the relatively homogenous 3' terminus of an in vitro transcribed MRP RNA control and the differing 3' terminal profiles of U3 snoRNA, RNase P RNA, and telomerase RNA (hTR). 3' RACE coupled with deep sequencing provides a valuable framework for the functional characterization of 3' terminal sequences of noncoding RNAs.

TIDAL TAILS OF MINOR MERGERS: STAR FORMATION EFFICIENCY IN THE WESTERN TAIL OF NGC 2782

Energy Technology Data Exchange (ETDEWEB)

Knierman, Karen; Scowen, Paul; Jansen, Rolf A. [School of Earth and Space Exploration, Arizona State University, 550 East Tyler Mall, Room PSF-686 (P.O. Box 871404), Tempe, AZ 85287-1404 (United States); Knezek, Patricia M. [WIYN Consortium, Inc., 950 North Cherry Avenue, Tucson, AZ 85719 (United States); Wehner, Elizabeth, E-mail: karen.knierman@asu.edu, E-mail: paul.scowen@asu.edu, E-mail: rolf.jansen@asu.edu, E-mail: pknezek@noao.edu, E-mail: ewehner@haverford.edu [Department of Astronomy, Haverford College, Haverford, PA 19041 (United States)

2012-04-10

While major mergers and their tidal debris are well studied, they are less common than minor mergers (mass ratios {approx}< 0.3). The peculiar spiral NGC 2782 is the result of a merger between two disk galaxies with a mass ratio of {approx}4: 1 occurring {approx}200 Myr ago. This merger produced a molecular and H I-rich, optically bright eastern tail and an H I-rich, optically faint western tail. Non-detection of CO in the western tail by Braine et al. suggested that star formation had not yet begun to occur in that tidal tail. However, deep H{alpha} narrowband images show evidence of recent star formation in the western tail. Across the entire western tail, we find the global star formation rate per unit area ({Sigma}{sub SFR}) to be several orders of magnitude less than expected from the total gas density. Together with extended FUV+NUV emission from Galaxy Evolution Explorer along the tail, this indicates a low global star formation efficiency in the tidal tail producing lower mass star clusters. The H II region that we observed has a local (few-kiloparsec scale) {Sigma}{sub SFR} from H{alpha} that is less than that expected from the total gas density, which is consistent with other observations of tidal debris. The star formation efficiency of this H II region inferred from the total gas density is low, but normal when inferred from the molecular gas density. These results suggest the presence of a very small, locally dense region in the western tail of NGC 2782 or of a low-metallicity and/or low-pressure star-forming region.

Microscale mineralogical characterization of As, Fe, and Ni in uranium mine tailings

Science.gov (United States)

Essilfie-Dughan, Joseph; Hendry, M. Jim; Warner, Jeff; Kotzer, Tom

2012-11-01

Uranium (U) ores can contain high concentrations of elements of concern (EOCs), such as arsenic (As) and nickel (Ni) present in sulfide and arsenide minerals. The U in these ores is often solubilized by adding H2SO4 to attain a pH ∼1 under oxic conditions. This process releases some EOCs from the primary minerals into solution. The barren raffinate (solution remaining after U extraction) is subsequently neutralized with Ca(OH)2 to a terminal pH of ∼10.5, resulting in a reduction in the aqueous concentrations of the EOCs. These neutralized raffinates are mixed with the non-reacted primary minerals and discharged as tailing into tailings management facilities (TMFs). To aid in the accurate characterization and quantification of the mineralogical controls on the concentrations of EOCs in the tailings porewater, their spatial distribution and speciation were studied at the micron scale in tailings samples collected from the Deilmann U Tailings Management Facility (DTMF), northern Saskatchewan, Canada. Backscattered electron images of the tailings samples generated using an electron microprobe show the presence of nodules (10-200 μm size) surrounded by bright rims. Wavelength dispersive spectrometric (WDS) and synchrotron-based micro-X-ray fluorescence (μ-XRF) elemental mapping show that the nodules are dominated by Ca and S (as gypsum) and the bright rims are dominated by Fe, As, and Ni. Micro-X-ray absorption near-edge structure (μ-XANES) spectra collected within and near the rims indicate that the Fe and Ni are present mainly in the +3 and +2 oxidation states, respectively; for As, the +5 oxidation state dominates but significant amounts of the +3 oxidation state are present in some areas. Linear combination fit analyses of the K-edges for the Fe, As, and Ni μ-XANES spectra to reference compounds suggest the Fe in the rims is present as ferrihydrite with As and Ni are adsorbed to it. Energy dispersive spectrometric (EDS) data indicate that isolated, highly

Thermal stabilization of uranium mill tailings

International Nuclear Information System (INIS)

Dreesen, D.R.; Williams, J.M.; Cokal, E.J.

1981-01-01

The sintering of tailings at high temperatures (1200 0 C) has shown promise as a conditioning approach that greatly reduces the 222 Rn emanation of uranium mill tailings. The structure of thermally stabilized tailings has been appreciably altered producing a material that will have minimal management requirements and will be applicable to on-site processing and disposal. The mineralogy of untreated tailings is presented to define the structure of the original materials. Quartz predominates in most tailings samples; however, appreciable quantities of gypsum, clay, illite, or albites are found in some tailings. Samples from the Durango and Shiprock sites have plagioclase-type aluminosilicates and non-aluminum silicates as major components. The iron-rich vanadium tailings from the Salt Lake City site contain appreciable quantities of α-hematite and chloroapatite. The reduction in radon emanation power and changes in mineralogy as a function of sintering temperature are presented

Which is the most preventive measure against tail damage in finisher pigs: tail docking, straw provision or lowered stocking density?

DEFF Research Database (Denmark)

Larsen, Mona Lilian Vestbjerg; Andersen, Heidi Mai-Lis; Pedersen, Lene Juul

2018-01-01

One challenge of intensive pig production is tail damage caused by tail biting, and farmers often decrease the prevalence of tail damage through tail docking. However, tail docking is not an optimal preventive measure against tail damage and thus, it would be preferable to replace it. The aim of ...

Interactions between Casein kinase Iepsilon (CKIepsilon and two substrates from disparate signaling pathways reveal mechanisms for substrate-kinase specificity.

Directory of Open Access Journals (Sweden)

Caroline Lund Dahlberg

Full Text Available Members of the Casein Kinase I (CKI family of serine/threonine kinases regulate diverse biological pathways. The seven mammalian CKI isoforms contain a highly conserved kinase domain and divergent amino- and carboxy-termini. Although they share a preferred target recognition sequence and have overlapping expression patterns, individual isoforms often have specific substrates. In an effort to determine how substrates recognize differences between CKI isoforms, we have examined the interaction between CKIepsilon and two substrates from different signaling pathways.CKIepsilon, but not CKIalpha, binds to and phosphorylates two proteins: Period, a transcriptional regulator of the circadian rhythms pathway, and Disheveled, an activator of the planar cell polarity pathway. We use GST-pull-down assays data to show that two key residues in CKIalpha's kinase domain prevent Disheveled and Period from binding. We also show that the unique C-terminus of CKIepsilon does not determine Dishevelled's and Period's preference for CKIepsilon nor is it essential for binding, but instead plays an auxillary role in stabilizing the interactions of CKIepsilon with its substrates. We demonstrate that autophosphorylation of CKIepsilon's C-terminal tail prevents substrate binding, and use mass spectrometry and chemical crosslinking to reveal how a phosphorylation-dependent interaction between the C-terminal tail and the kinase domain prevents substrate phosphorylation and binding.The biochemical interactions between CKIepsilon and Disheveled, Period, and its own C-terminus lead to models that explain CKIepsilon's specificity and regulation.

Uranium mill tailings and radon

International Nuclear Information System (INIS)

Hanchey, L.A.

1981-01-01

The major health hazard from uranium mill tailings is presumed to be respiratory cancer resulting from the inhalation of radon daughter products. A review of studies on inhalation of radon and its daughters indicates that the hazard from the tailings is extremely small. If the assumptions used in the studies are correct, one or two people per year in the US may develop cancer as a result of radon exhaled from all the Uranium Mill Tailings Remedial Action Program sites. The remedial action should reduce the hazard from the tailings by a factor of about 100

Uranium mill tailings and radon

Energy Technology Data Exchange (ETDEWEB)

Hanchey, L A

1981-04-01

The major health hazard from uranium mill tailings is presumed to be respiratory cancer resulting from the inhalation of radon daughter products. A review of studies on inhalation of radon and its daughters indicates that the hazard from the tailings is extremely small. If the assumptions used in the studies are correct, one or two people per year in the United States may develop cancer as a result of radon exhaled from all the Uranium Mill Tailings Remedial Action program sites. The remedial action should reduce the hazard from the tailings by a factor of about 100.

Uranium mill tailings and radon

Energy Technology Data Exchange (ETDEWEB)

Hanchey, L A

1981-01-01

The major health hazard from uranium mill tailings is presumed to be respiratory cancer resulting from the inhalation of radon daughter products. A review of studies on inhalation of radon and its daughters indicates that the hazard from the tailings is extremely small. If the assumptions used in the studies are correct, one or two people per year in the US may develop cancer as a result of radon exhaled from all the Uranium Mill Tailings Remedial Action Program sites. The remedial action should reduce the hazard from the tailings by a factor of about 100.

Estimation of Jump Tails

DEFF Research Database (Denmark)

Bollerslev, Tim; Todorov, Victor

We propose a new and flexible non-parametric framework for estimating the jump tails of Itô semimartingale processes. The approach is based on a relatively simple-to-implement set of estimating equations associated with the compensator for the jump measure, or its "intensity", that only utilizes...... the weak assumption of regular variation in the jump tails, along with in-fill asymptotic arguments for uniquely identifying the "large" jumps from the data. The estimation allows for very general dynamic dependencies in the jump tails, and does not restrict the continuous part of the process...... and the temporal variation in the stochastic volatility. On implementing the new estimation procedure with actual high-frequency data for the S&P 500 aggregate market portfolio, we find strong evidence for richer and more complex dynamic dependencies in the jump tails than hitherto entertained in the literature....

Average configuration of the geomagnetic tail

International Nuclear Information System (INIS)

Fairfield, D.H.

1979-01-01

Over 3000 hours of Imp 6 magnetic field data obtained between 20 and 33 R/sub E/ in the geomagnetic tail have been used in a statistical study of the tail configuration. A distribution of 2.5-min averages of B/sub z/ as a function of position across the tail reveals that more flux crosses the equatorial plane near the dawn and dusk flanks (B-bar/sub z/=3.γ) than near midnight (B-bar/sub z/=1.8γ). The tail field projected in the solar magnetospheric equatorial plane deviates from the x axis due to flaring and solar wind aberration by an angle α=-0.9 Y/sub SM/-2.7, where Y/sub SM/ is in earth radii and α is in degrees. After removing these effects, the B/sub y/ component of the tail field is found to depend on interplanetary sector structure. During an 'away' sector the B/sub y/ component of the tail field is on average 0.5γ greater than that during a 'toward' sector, a result that is true in both tail lobes and is independent of location across the tail. This effect means the average field reversal between northern and southern lobes of the tail is more often 178 0 rather than the 180 0 that is generally supposed

Segregation and differential settling in flocculated tailings

Energy Technology Data Exchange (ETDEWEB)

Farinato, R.S.; Mahmoudkhani, A.; Fenderson, T.; Watson, P. [Kemira, Atlanta, GA (United States)

2010-07-01

Untreated oil sands tailings have a high solids content, have poor dewaterability, and contain no aggregates. This PowerPoint presentation investigated segregation and differential settling in flocculated tailings. Tailings were treated with gypsum and various polymers. Cylinder settling, dynamic rheometry, particle size analysis, and microscopy techniques were used to characterize the composite tailings. The particles sizes of the samples were evaluated in relation to shear rate, bed depth, and treatment. The study showed that the gypsum-treated tailings had small aggregates, size stratification, a high solids content, and poor dewaterability. The polymer N-treated tailings had the lowest solids content, good dewaterability, and weak aggregates. The polymer A-treated tailings had a low solids content, very good dewaterability, and strong aggregates. The addition of a coagulant to the polymer-A treated tailings provided weaker aggregates and a higher solids content. tabs., figs.

Role of the ribosomal P-site elements of m²G966, m⁵C967, and the S9 C-terminal tail in maintenance of the reading frame during translational elongation in Escherichia coli.

Science.gov (United States)

Arora, Smriti; Bhamidimarri, Satya Prathyusha; Weber, Michael H W; Varshney, Umesh

2013-08-01

The ribosomal P-site hosts the peptidyl-tRNAs during translation elongation. Which P-site elements support these tRNA species to maintain codon-anticodon interactions has remained unclear. We investigated the effects of P-site features of methylations of G966, C967, and the conserved C-terminal tail sequence of Ser, Lys, and Arg (SKR) of the S9 ribosomal protein in maintenance of the translational reading frame of an mRNA. We generated Escherichia coli strains deleted for the SKR sequence in S9 ribosomal protein, RsmB (which methylates C967), and RsmD (which methylates G966) and used them to translate LacZ from its +1 and -1 out-of-frame constructs. We show that the S9 SKR tail prevents both the +1 and -1 frameshifts and plays a general role in holding the P-site tRNA/peptidyl-tRNA in place. In contrast, the G966 and C967 methylations did not make a direct contribution to the maintenance of the translational frame of an mRNA. However, deletion of rsmB in the S9Δ3 background caused significantly increased -1 frameshifting at 37°C. Interestingly, the effects of the deficiency of C967 methylation were annulled when the E. coli strain was grown at 30°C, supporting its context-dependent role.

Ecotoxicity of Mine Tailings: Unrehabilitated Versus Rehabilitated.

Science.gov (United States)

Maboeta, M S; Oladipo, O G; Botha, S M

2018-05-01

Earthworms are bioindicators of soil pollution. The ecotoxicity of tailings from selected gold mines in South Africa was investigated utilizing Eisenia andrei bioassays and biomarkers. Samples were obtained from unrehabilitated, rehabilitated and naturally vegetated sites. Biomass, neutral red retention time (NRRT), survival and reproduction were assessed using standardized protocols. Earthworm biomass, NRRT and reproductive success in rehabilitated tailings (comparable to naturally vegetated site) were significantly higher (p tailings. In addition, significantly lower (p tailings compared to the unrehabilitated. Further, significantly lower (p tailings than the rehabilitated and naturally vegetated sites. Overall, reduced ecotoxicity effects were confirmed in rehabilitated compared to unrehabilitated tailings. This suggests that rehabilitation as a post-mining restorative strategy has strong positive influence on mine tailings.

CHARACTERIZATION OF CARBOXY METHYL CELLULOSE (CMC FROM Eichornia crassipes (Mart Solms

Directory of Open Access Journals (Sweden)

Arum Wijayani

2010-06-01

Full Text Available Carboxy Methyl Cellulose (CMC, a compound made made of eceng gondok has been implied for its characteristic by a constructive wet system, with media such as methanol, propanol and water. Four consecutive phases involving alkalization, carboxymethylization, neutralization and drainage were used in the making process of CMC. The first two process were prepared by reacting NaOH and ClCH2COONa with NaOH 22; 32.5; 39.2; 45.9 g and 20; 26; 32; 38 g ClCH2COONa respectively. Added acetic acid was used in the neutralization process, whilst drainage only involved heating in the oven. The overall result for each characteristic substitution degree, acidity; viscosity; contens of water consentration of NaCl and purity 0.4 - 0.85, 6.10 - 8.49, 3 - 10 cP, 3.57 - 19.4 %, 12.9 - 22.4 % and 77.96 - 87.09 % respectively. Based on the obtained characteristic, could be concluded that CMC is considered as a technical quality and can also be used as filler constituent in adhesive. Keywords: CMC, alkalization, carboxymethylization

Structural investigation of a C-terminal EphA2 receptor mutant: Does mutation affect the structure and interaction properties of the Sam domain?

Science.gov (United States)

Mercurio, Flavia A; Costantini, Susan; Di Natale, Concetta; Pirone, Luciano; Guariniello, Stefano; Scognamiglio, Pasqualina L; Marasco, Daniela; Pedone, Emilia M; Leone, Marilisa

2017-09-01

Ephrin A2 receptor (EphA2) plays a key role in cancer, it is up-regulated in several types of tumors and the process of ligand-induced receptor endocytosis, followed by degradation, is considered as a potential path to diminish tumor malignancy. Protein modulators of this mechanism are recruited at the cytosolic Sterile alpha motif (Sam) domain of EphA2 (EphA2-Sam) through heterotypic Sam-Sam associations. These interactions engage the C-terminal helix of EphA2 and close loop regions (the so called End Helix side). In addition, several studies report on destabilizing mutations in EphA2 related to cataract formation and located in/or close to the Sam domain. Herein, we analyzed from a structural point of view, one of these mutants characterized by the insertion of a novel 39 residue long polypeptide at the C-terminus of EphA2-Sam. A 3D structural model was built by computational methods and revealed partial disorder in the acquired C-terminal tail and a few residues participating in an α-helix and two short β-strands. We investigated by CD and NMR studies the conformational properties in solution of two peptides encompassing the whole C-terminal tail and its predicted helical region, respectively. NMR binding experiments demonstrated that these peptides do not interact relevantly with either EphA2-Sam or its interactor Ship2-Sam. Molecular dynamics (MD) simulations further indicated that the EphA2 mutant could be represented only through a conformational ensemble and that the C-terminal tail should not largely wrap the EphA2-Sam End-Helix interface and affect binding to other Sam domains. Copyright © 2017 Elsevier B.V. All rights reserved.

Metabolic production of a novel polymer feedstock, 3-carboxy muconate, from vanillin.

Science.gov (United States)

Gosling, Aaron; Fowler, S Jane; O'Shea, Michael S; Straffon, Melissa; Dumsday, Geoff; Zachariou, Michael

2011-04-01

Vanillin can be produced on a commercial scale by depolymerising renewable lignin. One product of microbial metabolism of vanillin by common soil microbes, such as Acinetobacter baylyi, is a tricarboxylic acid with a butadiene backbone known as 3-carboxy muconate (3CM). Three enzymes, 4-hydroxy benzaldehyde dehydrogenase, vanillate monooxygenase and protocatechuate 3,4-dioxygenase, catalyse the biotransformation of vanillin to 3CM. These three enzymes were metabolically engineered into an Escherichia coli host, giving a biocatalyst that converted vanillin into 3CM. The biocatalyst was found to give 100% yield of 3CM from 1 mM of vanillin after 39 h. The rate-limiting reaction was identified as the conversion of vanillate to 3,4-dihydroxybenzoate catalysed by vanillate monooxygenase. Low expression of the reductase subunit of this enzyme was identified as contributing to the reduced rate of this reaction. Proof of principle of a novel application for 3CM was demonstrated when it was converted into a trimethyl ester derivative and copolymerised with styrene.

ESTIMATION OF FILTRATION CAPACITY OF POSTFLOTATION TAILINGS EMBEDDED IN DAMS OF TAILINGS DEPOSITION SITES

Directory of Open Access Journals (Sweden)

Wojciech Tschuschke

2015-10-01

Full Text Available Construction of very big mine tailings deposition sites, such as postflotation tailings ponds, is a complicated engineering task, in which several technical and environmental problems need to be solved. Designing, construction and operation of such an object applying the monitoring method consists in the verification of design assumptions based on continuous observations. One of the primary tasks of monitoring while the deposition site is being filled with tailings is to control quality of the formed dam embankments, as the structural element of the object responsible for its stability. In order to use material selected from deposited tailings in the construction of dams it is necessary to define grain size and compaction criteria, which directly affect load bearing capacity and deformation of the structure. For this reason main control tests include the analyses of grain size distribution and physical properties of the material embedded in the dams. These data may also be used to estimate filtration capacity of the embankment. A lack of drainage, causing accumulation of water within the embankment, may potentially deteriorate stability conditions. This paper presents the use of empirical formulas, i.e. formulas typically applied to natural soils, to assess permeability coefficient of tailings. A simple empirical formula was also proposed for the estimation of permeability coefficient of tailings based on grain size and compaction parameters determined in routine quality tests of constructed dam embankments.

Sub-aerial tailings deposition

International Nuclear Information System (INIS)

Knight, R.B.; Haile, J.P.

1984-01-01

The sub-aerial technique involves the systematic deposition of tailings in thin layers and allowing each layer to settle, drain and partially air dry prior to covering with a further layer. Underdrainage produces densities in excess of those achieved by sub-aqueous deposition and any air-drying serves to preconsolidate each layer with a resulting further increase in density. The low permeability of the tailings surface resulting from this deposition technique results in high runoff coefficients and, by decanting the runoff component of direct precipitation, a net evaporation condition can be achieved even in high rainfall areas. An underdrainage system prevents the build-up of excess pore-pressures within the tailings mass and at decommissioning the tailings are fully consolidated and drained thereby eliminating the possibility of any long term seepage. This paper presents a general description of these design concepts, and details of two projects where the concepts have been applied

Arabidopsis thaliana FLA4 functions as a glycan-stabilized soluble factor via its carboxy-proximal Fasciclin 1 domain.

Science.gov (United States)

Xue, Hui; Veit, Christiane; Abas, Lindy; Tryfona, Theodora; Maresch, Daniel; Ricardi, Martiniano M; Estevez, José Manuel; Strasser, Richard; Seifert, Georg J

2017-08-01

Fasciclin-like arabinogalactan proteins (FLAs) are involved in numerous important functions in plants but the relevance of their complex structure to physiological function and cellular fate is unresolved. Using a fully functional fluorescent version of Arabidopsis thaliana FLA4 we show that this protein is localized at the plasma membrane as well as in endosomes and soluble in the apoplast. FLA4 is likely to be GPI-anchored, is highly N-glycosylated and carries two O-glycan epitopes previously associated with arabinogalactan proteins. The activity of FLA4 was resistant against deletion of the amino-proximal fasciclin 1 domain and was unaffected by removal of the GPI-modification signal, a highly conserved N-glycan or the deletion of predicted O-glycosylation sites. Nonetheless these structural changes dramatically decreased endoplasmic reticulum (ER)-exit and plasma membrane localization of FLA4, with N-glycosylation acting at the level of ER-exit and O-glycosylation influencing post-secretory fate. We show that FLA4 acts predominantly by molecular interactions involving its carboxy-proximal fasciclin 1 domain and that its amino-proximal fasciclin 1 domain is required for stabilization of plasma membrane localization. FLA4 functions as a soluble glycoprotein via its carboxy-proximal Fas1 domain and its normal cellular trafficking depends on N- and O-glycosylation. © 2017 The Authors. The Plant Journal published by John Wiley & Sons Ltd and Society for Experimental Biology.

COMET C/2011 W3 (LOVEJOY): ORBIT DETERMINATION, OUTBURSTS, DISINTEGRATION OF NUCLEUS, DUST-TAIL MORPHOLOGY, AND RELATIONSHIP TO NEW CLUSTER OF BRIGHT SUNGRAZERS

International Nuclear Information System (INIS)

Sekanina, Zdenek; Chodas, Paul W.

2012-01-01

We describe the physical and orbital properties of C/2011 W3. After surviving perihelion passage, the comet was observed to undergo major physical changes. The permanent loss of the nuclear condensation and the formation of a narrow spine tail were observed first at Malargue, Argentina, on December 20 and then systematically at Siding Spring, Australia. The process of disintegration culminated with a terminal fragmentation event on December 17.6 UT. The postperihelion dust tail, observed for ∼3 months, was the product of activity over 12 g (equivalent to a sphere 150-200 m across) just before the terminal event, still possessed nontrivial cohesive strength. The high production rates of atomic oxygen, observed shortly after perihelion, are compatible with a subkilometer-sized nucleus. The spine tail—the product of the terminal fragmentation—was a synchronic feature, whose brightest part contained submillimeter-sized dust grains, released at velocities of up to 30 m s –1 . The loss of the nuclear condensation prevented an accurate orbital-period determination by traditional techniques. Since the missing nucleus must have been located on the synchrone, whose orientation and sunward tip have been measured, we compute the astrometric positions of this missing nucleus as the coordinates of the points of intersection of the spine tail's axis with the lines of forced orbital-period variation, derived from the orbital solutions based on high-quality preperihelion astrometry from the ground. The resulting orbit gives 698 ± 2 yr for the osculating orbital period, showing that C/2011 W3 is the first member of the expected new, 21st-century cluster of bright Kreutz-system sungrazers, whose existence was predicted by these authors in 2007. From the spine tail's evolution, we determine that its measured tip, populated by dust particles 1-2 mm in diameter, receded antisunward from the computed position of the missing nucleus. The bizarre appearance of the comet's dust

Markov Tail Chains

OpenAIRE

janssen, Anja; Segers, Johan

2013-01-01

The extremes of a univariate Markov chain with regularly varying stationary marginal distribution and asymptotically linear behavior are known to exhibit a multiplicative random walk structure called the tail chain. In this paper we extend this fact to Markov chains with multivariate regularly varying marginal distributions in Rd. We analyze both the forward and the backward tail process and show that they mutually determine each other through a kind of adjoint relation. In ...

Diagnostic analysis of electrodialysis in mine tailing materials

DEFF Research Database (Denmark)

Hansen, Henrik K.; Ribeiro, Alexandra B.; Mateus, Eduardo

2007-01-01

Removal of heavy metals from mine tailings and soil contaminated by copper mining activities was studied under batch electrodialytic conditions. Two types of mine tailings were treated: (i) freshly produced tailings coming directly from the flotation process, and (ii) tailings deposited...... in a tailings pond, for approximately 20 years. The main contaminant was copper-found in concentration around 800-1800 ppm. The fractionation of copper and other characteristics of the tailings differ for the two tailings, indicating natural oxidation reactions in the old deposited ones. Electrodialytical...

Tales of island tails

NARCIS (Netherlands)

Groot, de Alma V.; Oost, Albert P.; Veeneklaas, Roos M.; Lammerts, Evert Jan; Duin, van Willem E.; Wesenbeeck, van Bregje K.

2016-01-01

The Frisian islands (Southern North Sea) have extensive island tails, i.e. the entire downdrift side of an island consisting of salt marshes, dunes, beaches and beach plains, and green beaches. Currently, large parts of these tails are ageing and losing dynamics, partly due to human influence.

Tail docking in pigs: a review on its short- and long-term consequences and effectiveness in preventing tail biting

Directory of Open Access Journals (Sweden)

Eleonora Nannoni

2014-02-01

Full Text Available In spite of European legislation attempting to limit this practice, tail docking is nowadays the only preventive measure against tail biting which is widely adopted by farmers. Docking consists in amputating, usually without anaesthesia or analgesia, the distal part of the tail, in order to reduce its attractiveness and to sensitize it, increasing avoidance behaviour in the bitten pig. Tail docking results in both acute and chronic effects on pig welfare, and its effectiveness in preventing tail biting is limited, since it reduces the symptoms of a behavioural disorder, but does not address the underlying causes. The aim of the present paper is to review the available literature on the effects of tail docking on swine welfare. Although from a practical standpoint the welfare risks arising from tail docking may appear to be negligible compared to those arising during and after tail biting outbreaks, it should be considered that, apart from acute physiological and behavioural responses, tail docking may also elicit long-term effects on weight gain, tail stump sensitivity and animal freedom to express their normal behaviour. Such chronic effects have been poorly investigated so far. Besides, studies evaluating the effectiveness of anaesthetics or analgesic treatments are often conflicting. Within this framework, further research is recommended in order to reduce the acute and chronic pain and discomfort experienced by the animals, until preventive measures (e.g., environmental enrichment, stocking densities are broadly adopted to prevent tail biting.

Meeting the challenge - solutions for managing oil sands tailings: report of the fine tailings fundamentals consortium 1989-1995

International Nuclear Information System (INIS)

1996-01-01

The development and demonstration of effective alternatives for the management of fine tailings in the oil sands industry were discussed in a report describing the work of the Fine Tailings Fundamentals Consortium during the period from 1989 to 1995. The final report of the Consortium is a four-volume publication entitled 'Advances in Oil Sands Tailings Research' which is the state-of-the-art reference to key issues in the reclamation of fine tailings. Government regulations now make it the responsibility of industry to integrate the fine tailings into reclaimed landscapes, so that the final landscape is equal in productive capability to the pre-disturbed state. Impressive progress has been made in understanding the formation of fine tailings and in characterizing their properties, much of it through the work of this Consortium. Fundamental research on the clay particles within fine tailings provides a better understanding of how to manage them. Although there is no 'magic bullet', research has demonstrated that an integrated approach incorporating fine tailings with a variety of elements, uplands, lakes and wetlands, offer the best hope for an environmentally sound solution. figs

The Tail of BPM

Science.gov (United States)

Kruba, Steve; Meyer, Jim

Business process management suites (BPMS's) represent one of the fastest growing segments in the software industry as organizations automate their key business processes. As this market matures, it is interesting to compare it to Chris Anderson's 'Long Tail.' Although the 2004 "Long Tail" article in Wired magazine was primarily about the media and entertainment industries, it has since been applied (and perhaps misapplied) to other markets. Analysts describe a "Tail of BPM" market that is, perhaps, several times larger than the traditional BPMS product market. This paper will draw comparisons between the concepts in Anderson's article (and subsequent book) and the BPM solutions market.

Effects of Tail Clipping on Larval Performance and Tail Regeneration Rates in the Near Eastern Fire Salamander, Salamandra infraimmaculata.

Directory of Open Access Journals (Sweden)

Ori Segev

Full Text Available Tail-tip clipping is a common technique for collecting tissue samples from amphibian larvae and adults. Surprisingly, studies of this invasive sampling procedure or of natural tail clipping--i.e., bites inflicted by predators including conspecifics--on the performance and fitness of aquatic larval stages of urodeles are scarce. We conducted two studies in which we assessed the effects of posterior tail clipping (~30 percent of tail on Near Eastern fire salamander (Salamandra infraimmaculata larvae. In a laboratory study, we checked regeneration rates of posterior tail-tip clipping at different ages. Regeneration rates were hump-shaped, peaking at the age of ~30 days and then decreasing. This variation in tail regeneration rates suggests tradeoffs in resource allocation between regeneration and somatic growth during early and advanced development. In an outdoor artificial pond experiment, under constant larval densities, we assessed how tail clipping of newborn larvae affects survival to, time to, and size at metamorphosis. Repeated measures ANOVA on mean larval survival per pond revealed no effect of tail clipping. Tail clipping had correspondingly no effect on larval growth and development expressed in size (mass and snout-vent length at, and time to, metamorphosis. We conclude that despite the given variation in tail regeneration rates throughout larval ontogeny, clipping of 30% percent of the posterior tail area seems to have no adverse effects on larval fitness and survival. We suggest that future use of this imperative tool for the study of amphibian should take into account larval developmental stage during the time of application and not just the relative size of the clipped tail sample.

Characterization and dewatering of flotation technological tailings

Directory of Open Access Journals (Sweden)

Grigorova I.

2014-01-01

Full Text Available The treatment of flotation tailings is today a subject of interest in mineral processing because of the potential of wasted materials as an actual mineral resource and because of environmental reasons. Decantation ponds are found at almost every mine in the world. They are large earth fill dams containing the residue of the milling process to extract metals from mined ores. Traditional wet tailings disposal has been problematic due to the risk of ground water contamination and the difficulty in rehabilitating storage sites. Tailings dams are at risk of failure due to leakage, instability, liquefaction, and poor design. In the last few years the use of paste technology in the disposal of mine tailings is increasingly studied as an option to conventional tailings dams. The Lucky Invest Concentrator is located in the Eastern Rhodopes Mountain of Bulgaria. Since 1959 lead-zinc ores are dressed. Finally, during the flotation cycle lead and zinc concentrates are produced. The final technological processing waste precipitates in tailing pond. Research and development program has started to established opportunities to obtain dry deposit of the ore processing residue and analyses the feature of new tailing disposal method. The tailings particle size distributions and chemical compositions were determined. The data from laboratory and pilot scale tests clearly illustrate that there are the possibilities to obtaine lead-zinc dewatered tailings. The experimental results show that new cyclone modifications have a potential in dewatering technology of flotation tailings. It appears that dewatering cyclones can be an approach on new tailings pond elimination technology.

Uranium mill tailings stabilization

International Nuclear Information System (INIS)

Hartley, J.N.; Koehmstedt, P.L.; Esterl, D.J.; Freeman, H.D.

1980-02-01

Uranium mill tailings pose a potential radiation health hazard to the public. Therefore, stabilization or disposal of these tailings in a safe and environmentally sound way is needed to minimize radon exhalation and other environmental hazards. One of the most promising concepts for stabilizing U tailings is the use of asphalt emulsion to contain radon and other hazardous materials within uranium tailings. This approach is being investigated at the Pacific Northwest Laboratory. Results of these studies indicate that a radon flux reduction of greater than 99% can be obtained using either a poured-on/sprayed-on seal (3.0 to 7.0 mm thick) or an admixture seal (2.5 to 12.7 cm thick) containing about 18 wt % residual asphalt. A field test was carried out in June 1979 at the Grand Junction tailings pile in order to demonstrate the sealing process. A reduction in radon flux ranging from 4.5 to greater than 99% (76% average) was achieved using a 15.2-cm (6-in.) admix seal with a sprayed-on top coat. A hydrostatic stabilizer was used to apply the admix. Following compaction, a spray coat seal was applied over the admix as the final step in construction of a radon seal. Overburden was applied to provide a protective soil layer over the seal. Included in part of the overburden was a herbicide to prevent root penetration

Liquefaction of uranium tailings

International Nuclear Information System (INIS)

1992-02-01

Numerical methods for assessing the liquefaction potential of soils are reviewed with a view to their application to uranium tailings. The method can be divided into two categories: total stress analysis, where changes in pore pressure are not considered in the soil model, and effective stress analysis, where changes in pore pressure are included in the soil model. Effective stress analysis is more realistic, but few computer programs exist for such analysis in two or three dimensions. A simple linearized, two-dimensional, finite element effective stress analysis which incorporates volumetric compaction due to shear motion is described and implemented. The new program is applied to the assessment of liquefaction potential of tailings in the Quirke Mine tailings area near Elliot Lake, Ontario. The results are compared with those of a total stress analysis. Both analyses indicate liquefaction would occur if a magnitude 6.0 earthquake were to occur near the area. However, the extent of liquefaction predicted by the effective stress analysis is much less than that predicted by the total stress analysis. The results of both methods are sensitive to assumed material properties and to the method used to determine the cyclic shear strength of the tailings. Further analysis, incorporating more in situ and/or laboratory data, is recommended before conclusions can be made concerning the dynamic stability of these tailings

Predicting radon flux from uranium mill tailings

International Nuclear Information System (INIS)

Freeman, H.D.; Hartley, J.N.

1983-11-01

Pacific Northwest Laboratory (PNL), under contract to the US Department of Energy (DOE) Uranium Mill Tailings Remedial Action Project (UMTRAP) office, is developing technology for the design of radon barriers for uranium mill tailings piles. To properly design a radon cover for a particular tailings pile, the radon flux emanating from the bare tailings must be known. The tailings characteristics required to calculate the radon flux include radium-226 content, emanating power, bulk density, and radon diffusivity. This paper presents theoretical and practical aspects of estimating the radon flux from an uranium tailings pile. Results of field measurements to verify the calculation methodology are also discussed. 24 references, 4 figures, 4 tables

Human chimera-type galectin-3: defining the critical tail length for high-affinity glycoprotein/cell surface binding and functional competition with galectin-1 in neuroblastoma cell growth regulation.

Science.gov (United States)

Kopitz, Jürgen; Vértesy, Sabine; André, Sabine; Fiedler, Sabine; Schnölzer, Martina; Gabius, Hans-Joachim

2014-09-01

Many human proteins have a modular design with receptor and structural domains. Using adhesion/growth-regulatory galectin-3 as model, we describe an interdisciplinary strategy to define the functional significance of its tail established by nine non-triple helical collagen-like repeats (I-IX) and the N-terminal peptide. Genetic engineering with sophisticated mass spectrometric product analysis provided the tools for biotesting, i.e. eight protein variants with different degrees of tail truncation. Evidently,various aspects of galectin-3 activity (cis binding and cell bridging) are affected by tail shortening in a different manner. Thus, this combined approach reveals an unsuspected complexity of structure-function relationship, encouraging further application beyond this chimera-type galectin. Copyright © 2014 Elsevier Masson SAS. All rights reserved.

Numerical modelling for stability of tailings dams

OpenAIRE

Auchar, Muhammad; Mattsson, Hans; Knutsson, Sven

2013-01-01

A tailings dam is a large embankment structure that is constructed to store the waste from the mining industry. Stability problems may occur in a tailings dam due to factors such as quick rate of raising, internal erosion and liquefaction. The failure of a tailings dam may cause loss of human life and environmental degradation. Tailings Dams must not only be stable during the time the tailings storage facility is in operation, but also long time after the mine is closed. In Sweden, the licens...

Missense mutation in DISC1 C-terminal coiled-coil has GSK3β signaling and sex-dependent behavioral effects in mice

Science.gov (United States)

Dachtler, James; Elliott, Christina; Rodgers, R. John; Baillie, George S.; Clapcote, Steven J.

2016-01-01

Disrupted-in-Schizophrenia 1 (DISC1) is a risk factor for schizophrenia and affective disorders. The full-length DISC1 protein consists of an N-terminal ‘head’ domain and a C-terminal tail domain that contains several predicted coiled-coils, structural motifs involved in protein-protein interactions. To probe the in vivo effects of missense mutation of DISC1’s C-terminal tail, we tested mice carrying mutation D453G within a predicted α-helical coiled-coil region. We report that, relative to wild-type littermates, female DISC1D453G mice exhibited novelty-induced hyperlocomotion, an anxiogenic profile in the elevated plus-maze and open field tests, and reduced social exploration of unfamiliar mice. Male DISC1D453G mice displayed a deficit in passive avoidance, while neither males nor females exhibited any impairment in startle reactivity or prepulse inhibition. Whole brain homogenates showed normal levels of DISC1 protein, but decreased binding of DISC1 to GSK3β, decreased phospho-inhibition of GSK3β at serine 9, and decreased levels of β-catenin in DISC1D453G mice of either sex. Interrupted GSK3β signaling may thus be part of the mechanism underlying the behavioral phenotype associated with D453G, in common with the previously described N-terminal domain mutations Q31L and L100P in mice, and the schizophrenia risk-conferring variant R264Q in humans. PMID:26728762

Multichannel thickener of flotation tailings

Energy Technology Data Exchange (ETDEWEB)

Kondratenko, A F; Shuliko, A N; Zinchenko, A F

1983-04-01

A multichannel thickener of flotation tailings developed by Ukrniiugleobogashchenie is described. Tailings with solid content ranging from 40 to 60 g/l are mixed with flocculation reagents (quantity ratio from 60 to 70 g/l) in a turbulent mixer: waste water with tailings fed to the mixer is divided into three streams, flocculation reagents are batched in stages with each water stream. After turbulent mixing, water, tailings and reagent are fed to the settling chamber. Settling chamber (dimensions 2.4 x 1.5 x 1.0 m) is divided into a number of channels by settling surfaces of 0.35 m/sup 2/ each, inclined at an angle of 55 degrees. Distance between the surfaces is 50 mm. The thickener has a total settling surface of 18.7 m/sup 2/. Water with tailings flows upwards, cleaned water is removed by a separating system and settled tailings move downward and accumulate in the compacting chamber (dimensions 1.5 x 1.5 x 0.9 m). From the compacting chamber thickened slurry with solid content from 90 to 150 g/l is removed by a hydraulic system. During performance testing in some plants preparing coal difficult to wash, thickening efficiency amounted to 100%. The results of performance testing are shown in two tables. Factors which influence thickener productivity are evaluated. (In Russian)

PSR J2124-3358: A Bow Shock Nebula with an X-ray Tail

Science.gov (United States)

Chatterjee, S.; Gaensler, B. M.; Vigelius, M.; Cordes, J. M.; Arzoumanian, Z.; Stappers, B.; Ghavamian, P.; Melatos, A.

2005-12-01

As neutron stars move supersonically through the interstellar medium, their relativistic winds are confined by the ram pressure of the interstellar medium. The outer shocked layers may emit in Hα , producing a visible bow shock nebula, while the confined relativistic wind may produce radio or X-ray emission. The Hα bow shock nebula powered by the recycled pulsar J2124-3358 is asymmetric about the velocity vector and shows a marked kink. In recent observations with the Chandra X-ray Observatory, we have detected a long, curved X-ray tail associated with the pulsar. The tail is not aligned with the pulsar velocity, but is confined within the optical bow shock. The X-ray spectrum of the tail is well-fit by a power law, consistent with synchrotron emission from the wind termination shock and the post-shock flow. The presence of Hα and X-ray emission allows us to trace both the external ambient medium and the confined wind. In magnetohydrodynamic simulations, we verify that a bulk flow and non-uniformities in the ambient medium can produce the observed shape of the nebula, possibly in combination with an anisotropic pulsar wind. Support for this work was provided by the National Aeronautics and Space Administration through Chandra Award Number GO5-6075X issued by the Chandra X-ray Observatory Center, which is operated by the Smithsonian Astrophysical Observatory for and on behalf of the National Aeronautics Space Administration under contract NAS8-03060.

Comparison of the breeding biology of sympatric red-tailed Hawks, White-tailed Hawks, and Crested Caracaras in south Texas

Science.gov (United States)

Actkinson, M.A.; Kuvlesky, W.P.; Boal, C.W.; Brennan, L.A.; Hernandez, F.

2009-01-01

We compared the breeding biology of sympatric nesting Red-tailed Hawks (Buteo jamaicensis), White-tailed Hawks (Buteo albicaudatus), and Crested Caracaras (Caracara cheriway) in south Texas during 2003 and 2004. We monitored 46 breeding attempts by Red-tailed Hawks, 56 by White-tailed Hawks, and 27 by Crested Caracaras. Observed nesting success was similar for Red-tailed Hawks (62%) and Crested Caracaras (61%), but lower for White-tailed Hawks (51%). Daily survival rates (0.99) were the same for all three species. Red-tailed Hawks and White-tailed Hawks both fledged 1.13 young per nesting pair and Crested Caracaras fledged 1.39 young per nesting pair. All three species nested earlier in 2004 than in 2003; in addition, the overall nesting density of these three species almost doubled from 2003 (1.45 pairs/km2) to 2004 (2.71 pairs/km2). Estimated productivity of all three species was within the ranges reported from other studies. Given extensive and progressive habitat alteration in some areas of south Texas, and the limited distributions of White-tailed Hawks and Crested Caracaras, the presence of large ranches managed for free-range cattle production and hunting leases likely provides important habitat and may be key areas for conservation of these two species. ?? 2009 The Raptor Research Foundation, Inc.

Mineralogy and geochemistry of uranium mill tailings

International Nuclear Information System (INIS)

Pagel, M.; Somot, S.

2002-01-01

We have investigated three main types of uranium mill tailings: (1) acid mill tailings (Mounana, Gabon), (2) neutralized acid mill tailings (Ecarpiere and Jouac, France) and (3) alkaline mill tailings (Lodeve, France). We have focused especially on radium behaviour which is of major environmental concern in these tailings, but other metals were also studied. It is shown that in type 1 , trapping of 226 Ra by anglesite and barite is dominant whereas in types 2 and 3, 226 Ra is mainly or significantly scavenged by Fe- Mn oxyhydroxides. This study points out the importance of keeping conditions in which these oxyhydroxides will be stable for the long-term. Uranium would be also released during acidification of the tailings. This shows the importance to know more about the behavior of Ra during the crystallization of oxyhydroxides and during tailings diagenesis. Therefore, it is very important to study the sorption of Ra by clay minerals or late authigeneous minerals such as barite. (author)

A guide to the management of tailings facilities

International Nuclear Information System (INIS)

Bedard, C.; Ferguson, K.; Gladwin, D.; Lang, D.; Maltby, J.; McCann, M.; Poirier, P.; Schwenger, R.; Vezina, S.; West, S.; Duval, J.; Gardiner, E.; Jansons, K.; Lewis, B.; Matthews, J.; Mchaina, D.; Puro, M.; Siwik, R.; Welch, D.

1998-01-01

The 'Guide to the Management of Tailings Facilities' has been developed by the Mining Association of Canada in an effort to provide guidance to its member companies on sound practices for the safe and environmentally responsible management of tailings facilities. The guide is a reference tool to help companies ensure that they are managing their tailings facilities responsibly, integrating environmental and safety considerations in a consistent manner, with continuous improvement in the operation of tailings facilities. The key to managing tailings responsibly is consistent application of engineering capabilities through the full life cycle. The guide provides a basis for the development of customized tailings management systems to address specific needs at individual operations, and deals with environmental impacts, mill tailing characteristics, tailings facility studies and plans, dam and related structure design, and control and monitoring. Aspects relating to tailings facility siting, design, construction, operation, decommissioning and closure are also fully treated. 1 tab., 3 figs

Assessment of the PrPc Amino-Terminal Domain in Prion Species Barriers.

Science.gov (United States)

Davenport, Kristen A; Henderson, Davin M; Mathiason, Candace K; Hoover, Edward A

2016-12-01

Chronic wasting disease (CWD) in cervids and bovine spongiform encephalopathy (BSE) in cattle are prion diseases that are caused by the same protein-misfolding mechanism, but they appear to pose different risks to humans. We are interested in understanding the differences between the species barriers of CWD and BSE. We used real-time, quaking-induced conversion (RT-QuIC) to model the central molecular event in prion disease, the templated misfolding of the normal prion protein, PrP c , to a pathogenic, amyloid isoform, scrapie prion protein, PrP Sc We examined the role of the PrP c amino-terminal domain (N-terminal domain [NTD], amino acids [aa] 23 to 90) in cross-species conversion by comparing the conversion efficiency of various prion seeds in either full-length (aa 23 to 231) or truncated (aa 90 to 231) PrP c We demonstrate that the presence of white-tailed deer and bovine NTDs hindered seeded conversion of PrP c , but human and bank vole NTDs did the opposite. Additionally, full-length human and bank vole PrP c s were more likely to be converted to amyloid by CWD prions than were their truncated forms. A chimera with replacement of the human NTD by the bovine NTD resembled human PrP c The requirement for an NTD, but not for the specific human sequence, suggests that the NTD interacts with other regions of the human PrP c to increase promiscuity. These data contribute to the evidence that, in addition to primary sequence, prion species barriers are controlled by interactions of the substrate NTD with the rest of the substrate PrP c molecule. We demonstrate that the amino-terminal domain of the normal prion protein, PrP c , hinders seeded conversion of bovine and white-tailed deer PrP c s to the prion forms, but it facilitates conversion of the human and bank vole PrP c s to the prion forms. Additionally, we demonstrate that the amino-terminal domain of human and bank vole PrP c s requires interaction with the rest of the molecule to facilitate conversion by CWD

Dicty_cDB: Contig-U01237-1 [Dicty_cDB

Lifescience Database Archive (English)

Full Text Available EK998049 ) 1095521194243 Global-Ocean-Sampling_GS-33-01-01-1... 56 0.001 2 ( EH731489 ) CNMM4467.b1_E14.ab1 CNM(LMS) spotted...064606 ) 1095458025043 Global-Ocean-Sampling_GS-26-01-01-1... 56 0.003 1 ( ED814422 ) ML__Ba0092N03r ML__Ba Mim..... 161 5e-38 ( O14595 ) RecName: Full=Carboxy-terminal domain RNA polymerase II... 161 5e-38 ( Q09695 ) RecN...447 |pid:none) Homo sapiens CTD (carboxy-terminal... 56 2e-06 AM920428_969( AM920428 |pid:none) Penicillium ...um discoideum chromosome 2 map 3879572... 42 2e-04 9 ( FM992689 ) Candida dubliniensis CD36 chromosome 2, compl

Taming the tailings : dead ducks notwithstanding, extensive research is underway to deal with oilsands tailings in a more efficient manner

Energy Technology Data Exchange (ETDEWEB)

Collison, M.

2008-09-15

Research is now being conducted to reduce the environmental impacts of oil sands tailing ponds. Alberta's oil sands region contains an estimated 60 km{sup 2} of tailings ponds, which serve as holding basins for recycled water as well as collection sites for materials used in reclamation activities. The ponds contain residual bitumen, production chemicals, and minerals. While some of the water in the ponds can be re-used, mature fine tailings must be contained behind dikes. Every barrel of bitumen produced by the industry results in the creation of 1.5 barrels of mature fine tailings. Natural Resources Canada's CANMET Energy Technology Centre is currently conducting a research program with the University of Alberta to reduce the amounts of tailings produced by the industry. Options for dry stackable tailings are being explored, as well as methods of using the tailings to enhance various oil sands processes. It is hoped that the dry, stackable tailings can be used to help reclaim and rebuild Boreal regions impacted by the oil sands industry. The program is gaining interest due to concerns that leakages from the tailings ponds may pollute aquifers and rivers in a region noted for its water shortages. Research teams are also investigating the use of flocculants to create heavy non-segregated tailings. Researchers are also examining methods of recovering hydrocarbons, titanium, and zircon from the tailings. 3 figs.

TAIL1: an isthmin-like gene, containing type 1 thrombospondin-repeat and AMOP domain, mapped to ARVD1 critical region.

Science.gov (United States)

Rossi, Valeria; Beffagna, Giorgia; Rampazzo, Alessandra; Bauce, Barbara; Danieli, Gian Antonio

2004-06-23

Isthmins represent a novel family of vertebrate secreted proteins containing one copy of the thrombospondin type 1 repeat (TSR), which in mammals is shared by several proteins with diverse biological functions, including cell adhesion, angiogenesis, and patterning of developing nervous system. We have determined the genomic organization of human TAIL1 (thrombospondin and AMOP containing isthmin-like 1), a novel isthmin-like gene encoding a protein that contains a TSR and a C-terminal AMOP domain (adhesion-associated domain in MUC4 and other proteins), characteristic of extracellular proteins involved in adhesion processes. TAIL1 gene encompasses more than 24.4 kb. Analysis of the DNA sequence surrounding the putative transcriptional start region revealed a TATA-less promoter located in a CpG island. Several consensus binding sites for the transcription factors Sp1 and MZF-1 were identified in this promoter region. In humans, TAIL1 gene is located on chromosome 14q24.3 within ARVD1 (arrhythmogenic right ventricular dysplasia/cardiomyopathy, type 1) critical region; preliminary evidence suggests that it is expressed in several tissues, showing multiple alternative splicing.

Assessing Risks of Mine Tailing Dam Failures

Science.gov (United States)

Concha Larrauri, P.; Lall, U.

2017-12-01

The consequences of tailings dam failures can be catastrophic for communities and ecosystems in the vicinity of the dams. The failure of the Fundão tailings dam at the Samarco mine in 2015 killed 19 people with severe consequences for the environment. The financial and legal consequences of a tailings dam failure can also be significant for the mining companies. For the Fundão tailings dam, the company had to pay 6 billion dollars in fines and twenty-one executives were charged with qualified murder. There are tenths of thousands of active, inactive, and abandoned tailings dams in the world and there is a need to better understand the hazards posed by these structures to downstream populations and ecosystems. A challenge to assess the risks of tailings dams in a large scale is that many of them are not registered in publicly available databases and there is little information about their current physical state. Additionally, hazard classifications of tailings dams - common in many countries- tend to be subjective, include vague parameter definitions, and are not always updated over time. Here we present a simple methodology to assess and rank the exposure to tailings dams using ArcGIS that removes subjective interpretations. The method uses basic information such as current dam height, storage volume, topography, population, land use, and hydrological data. A hazard rating risk was developed to compare the potential extent of the damage across dams. This assessment provides a general overview of what in the vicinity of the tailings dams could be affected in case of a failure and a way to rank tailings dams that is directly linked to the exposure at any given time. One hundred tailings dams in Minas Gerais, Brazil were used for the test case. This ranking approach could inform the risk management strategy of the tailings dams within a company, and when disclosed, it could enable shareholders and the communities to make decisions on the risks they are taking.

Analysis of Heavy-Tailed Time Series

DEFF Research Database (Denmark)

Xie, Xiaolei

This thesis is about analysis of heavy-tailed time series. We discuss tail properties of real-world equity return series and investigate the possibility that a single tail index is shared by all return series of actively traded equities in a market. Conditions for this hypothesis to be true...... are identified. We study the eigenvalues and eigenvectors of sample covariance and sample auto-covariance matrices of multivariate heavy-tailed time series, and particularly for time series with very high dimensions. Asymptotic approximations of the eigenvalues and eigenvectors of such matrices are found...... and expressed in terms of the parameters of the dependence structure, among others. Furthermore, we study an importance sampling method for estimating rare-event probabilities of multivariate heavy-tailed time series generated by matrix recursion. We show that the proposed algorithm is efficient in the sense...

Monte Carlo-based tail exponent estimator

Science.gov (United States)

Barunik, Jozef; Vacha, Lukas

2010-11-01

In this paper we propose a new approach to estimation of the tail exponent in financial stock markets. We begin the study with the finite sample behavior of the Hill estimator under α-stable distributions. Using large Monte Carlo simulations, we show that the Hill estimator overestimates the true tail exponent and can hardly be used on samples with small length. Utilizing our results, we introduce a Monte Carlo-based method of estimation for the tail exponent. Our proposed method is not sensitive to the choice of tail size and works well also on small data samples. The new estimator also gives unbiased results with symmetrical confidence intervals. Finally, we demonstrate the power of our estimator on the international world stock market indices. On the two separate periods of 2002-2005 and 2006-2009, we estimate the tail exponent.

Uranium mill tailings remedial action technology

International Nuclear Information System (INIS)

Hartley, J.N.; Gee, G.W.

1984-01-01

The uranium milling process involves the hydrometallurgical extraction of uranium from ores and the resultant generation of large quantities of waste referred to as tailings. Uranium mill tailings have been identified as requiring remediation because they contain residual radioactive material that is not removed in the milling process. Potential radiation exposure can result from direct contact with the tailings, from radon gas emitted by the tailings, and from radioactive contamination of groundwater. As a result, the technology developed under the US Department of Energy (DOE) Uranium Mill Tailings Remedial Action Project (UMTRAP) and the US Nuclear Regulatory Commission (NRC) Uranium Recovery Program have focused on radon control, groundwater contamination and the long-term protection of the containment system. This paper briefly summarizes the UMTRAP and NRC remedial action technology development. 33 references, 9 figures, 5 tables

Order through disorder: hyper-mobile C-terminal residues stabilize the folded state of a helical peptide. a molecular dynamics study.

Directory of Open Access Journals (Sweden)

Kalliopi K Patapati

Full Text Available Conventional wisdom has it that the presence of disordered regions in the three-dimensional structures of polypeptides not only does not contribute significantly to the thermodynamic stability of their folded state, but, on the contrary, that the presence of disorder leads to a decrease of the corresponding proteins' stability. We have performed extensive 3.4 µs long folding simulations (in explicit solvent and with full electrostatics of an undecamer peptide of experimentally known helical structure, both with and without its disordered (four residue long C-terminal tail. Our simulations clearly indicate that the presence of the apparently disordered (in structural terms C-terminal tail, increases the thermodynamic stability of the peptide's folded (helical state. These results show that at least for the case of relatively short peptides, the interplay between thermodynamic stability and the apparent structural stability can be rather subtle, with even disordered regions contributing significantly to the stability of the folded state. Our results have clear implications for the understanding of peptide energetics and the design of foldable peptides.

Chapter 2. The history of uranium tailings formation in the North of Tajikistan, their current condition. 2.4. Degmai uranium tailings

International Nuclear Information System (INIS)

Khakimov, N.; Nazarov, Kh.M.; Mirsaidov, I.U.

2012-01-01

Present article is devoted to Degmai uranium tailings. The history of Degmai uranium tailings is presented. The current condition of uranium tailings is described. During the last 6-7 years, together with IAEA experts, monitoring is permanently carried out and the tailings influence on the environment is defined. Radiation and dosimetric investigation results from Degmai tailing' surface (June 2006) are considered.

3′ terminal diversity of MRP RNA and other human noncoding RNAs revealed by deep sequencing

Science.gov (United States)

2013-01-01

Background Post-transcriptional 3′ end processing is a key component of RNA regulation. The abundant and essential RNA subunit of RNase MRP has been proposed to function in three distinct cellular compartments and therefore may utilize this mode of regulation. Here we employ 3′ RACE coupled with high-throughput sequencing to characterize the 3′ terminal sequences of human MRP RNA and other noncoding RNAs that form RNP complexes. Results The 3′ terminal sequence of MRP RNA from HEK293T cells has a distinctive distribution of genomically encoded termini (including an assortment of U residues) with a portion of these selectively tagged by oligo(A) tails. This profile contrasts with the relatively homogenous 3′ terminus of an in vitro transcribed MRP RNA control and the differing 3′ terminal profiles of U3 snoRNA, RNase P RNA, and telomerase RNA (hTR). Conclusions 3′ RACE coupled with deep sequencing provides a valuable framework for the functional characterization of 3′ terminal sequences of noncoding RNAs. PMID:24053768

Risk assessment of tailings facility dam failure

OpenAIRE

Hadzi-Nikolova, Marija; Mirakovski, Dejan; Stefanova, Violeta

2011-01-01

This paper presents the consequences of tailings facility dam failure and therefore the needs for its risk assessment. Tailings are fine-grained wastes of the mining industry, output as slurries, due to mixing with water during mineral processing. Tailings dams vary a lot as it is affected by: tailings characteristics and mill output, site characteristics as: topography, hydrology, geology, groundwater, seismicity and available material and disposal methods. The talings which accumulat...

Placement of radium/barium sludges in tailings areas

International Nuclear Information System (INIS)

Murphy, K.L.; Multamaki, G.E.

1980-01-01

Currently radium is removed from uranium mining and milling effluents by the addition of barium chloride to precipitate the radium as radium/barium sulphate. The precipitate is allowed to settle in sedimentation basins prior to discharge of the effluent. The sedimentation basins are not suitable for final disposal of the sludge, and placement of the sludges in the tailings area has been proposed. The geochemical environment of fresh tailings areas was characterized as an acidic, oxidized surface zone underlain by an alkaline, reduced zone comprising the rest of the tailings. The quantity of sludge produced was estimated to be small relative to the quantity of tailings, and therefor a relatively small amount of radium would be added to the tailings disposal area by the addition of sludge. To confirm whether sludge addition affected radionuclide solubilization, laboratory leaching tests were conducted on slurries of acid leach tailings, and sludge-tailings mixtures. Radium in the (Ra,Ba)SO 4 sludge was at least as stable as radium in the tailings, and the sludge was able to absorb radium released from the tailings. The addition of sludge did not affect uranium and thorium solubilization. From these results it appears that the placement of sludge in tailings areas would not adversely affect the stability of radionuclides in the tailings or sludge. (auth)

COMET C/2011 W3 (LOVEJOY): ORBIT DETERMINATION, OUTBURSTS, DISINTEGRATION OF NUCLEUS, DUST-TAIL MORPHOLOGY, AND RELATIONSHIP TO NEW CLUSTER OF BRIGHT SUNGRAZERS

Energy Technology Data Exchange (ETDEWEB)

Sekanina, Zdenek; Chodas, Paul W., E-mail: Zdenek.Sekanina@jpl.nasa.gov, E-mail: Paul.W.Chodas@jpl.nasa.gov [Jet Propulsion Laboratory, California Institute of Technology, 4800 Oak Grove Drive, Pasadena, CA 91109 (United States)

2012-10-01

We describe the physical and orbital properties of C/2011 W3. After surviving perihelion passage, the comet was observed to undergo major physical changes. The permanent loss of the nuclear condensation and the formation of a narrow spine tail were observed first at Malargue, Argentina, on December 20 and then systematically at Siding Spring, Australia. The process of disintegration culminated with a terminal fragmentation event on December 17.6 UT. The postperihelion dust tail, observed for {approx}3 months, was the product of activity over <2 days. The nucleus' breakup and crumbling were probably caused by thermal stress due to the penetration of the intense heat pulse deep into the nucleus' interior after perihelion. The same mechanism may be responsible for cascading fragmentation of sungrazers at large heliocentric distances. The delayed response to the hostile environment in the solar corona is at odds with the rubble-pile model, since the residual mass of the nucleus, estimated at {approx}10{sup 12} g (equivalent to a sphere 150-200 m across) just before the terminal event, still possessed nontrivial cohesive strength. The high production rates of atomic oxygen, observed shortly after perihelion, are compatible with a subkilometer-sized nucleus. The spine tail-the product of the terminal fragmentation-was a synchronic feature, whose brightest part contained submillimeter-sized dust grains, released at velocities of up to 30 m s{sup -1}. The loss of the nuclear condensation prevented an accurate orbital-period determination by traditional techniques. Since the missing nucleus must have been located on the synchrone, whose orientation and sunward tip have been measured, we compute the astrometric positions of this missing nucleus as the coordinates of the points of intersection of the spine tail's axis with the lines of forced orbital-period variation, derived from the orbital solutions based on high-quality preperihelion astrometry from the

Proceedings of the 15. annual British Columbia MEND ML/ARD workshop : the management of tailings and tailings impoundments

International Nuclear Information System (INIS)

2009-02-01

This Mine Environment Neutral Drainage (MEND) workshop was held to promote the exchange of information and ideas on environmental protection and reclamation associated with mining. The workshop covered a broad spectrum of reclamation issues and the key environmental challenges facing the mining industry, such as acid mine drainage (AMD) control, and metal leaching and acid rock drainage (ML/ARD). The theme for the 2008 workshop was the management of tailings and tailings impoundments. Topics of discussion included hydrogeology and geochemistry; tailings disposal; mitigation; closure plans; and postclosure performance. The emphasis was on full-scale case studies, practical constraints and sustaining successful disposal strategies and remediation. The session on tailings management reviewed overarching policies and practices; methods of subaerial tailings disposal and case studies of tailings management; and detailed investigations of geochemical properties and processes. The conference featured 22 presentations, of which 4 have been catalogued separately for inclusion in this database. refs., tabs., figs

The evolution of tail weaponization in amniotes.

Science.gov (United States)

Arbour, Victoria M; Zanno, Lindsay E

2018-01-31

Weaponry, for the purpose of intraspecific combat or predator defence, is one of the most widespread animal adaptations, yet the selective pressures and constraints governing its phenotypic diversity and skeletal regionalization are not well understood. Here, we investigate the evolution of tail weaponry in amniotes, a rare form of weaponry that nonetheless evolved independently among a broad spectrum of life including mammals, turtles and dinosaurs. Using phylogenetic comparative methods, we test for links between morphology, ecology and behaviour in extant amniotes known to use the tail as a weapon, and in extinct taxa bearing osseous tail armaments. We find robust ecological and morphological correlates of both tail lashing behaviour and bony tail weaponry, including large body size, body armour and herbivory, suggesting these life-history parameters factor into the evolution of antipredator behaviours and tail armaments. We suggest that the evolution of tail weaponry is rare because large, armoured herbivores are uncommon in extant terrestrial faunas, as they have been throughout evolutionary history. © 2018 The Author(s).

Ecological aspects of microorganisms inhabiting uranium mill tailings

Science.gov (United States)

Miller, C.L.; Landa, E.R.; Updegraff, D.M.

1987-01-01

Numbers and types of microorganisms in uranium mill tailings were determined using culturing techniques. Arthrobacter were found to be the predominant microorganism inhabiting the sandy tailings, whereas Bacillus and fungi predominated in the slime tailings. Sulfate-reducing bacteria, capable of leaching radium, were isolated in low numbers from tailings samples but were isolated in significantly high numbers from topsoil in contact with the tailings. The results are placed in the context of the magnitude of uranium mill tailings in the United States, the hazards posed by the tailings, and how such hazards could be enhanced or diminished by microbial activities. Patterns in the composition of the microbial population are evaluated with respect to the ecological variables that influence microbial growth. ?? 1987 Springer-Verlag New York Inc.

Tailings management for the twenty-first century

International Nuclear Information System (INIS)

Frost, S.E.

1996-01-01

The evolution of tailings management at Saskatchewan uranium mines is traced from the fifties to the nineties. Some of the problems with past systems are discussed. The new tailings systems now being proposed for the new operations currently undergoing environmental assessment in Saskatchewan are examined in detail. These new systems represent a change in tailings management philosophy, from keeping tailings high and dry on the surface, to placement of tailings in a low-energy regime within the water table. There they are removed from the active surface environment, avoiding future erosion problems, with a reduced likelihood of suffering intrusion from future human or animal activities. (author). 16 refs., 5 figs

Rehabilitation of uranium tailings impoundments

International Nuclear Information System (INIS)

Crawley, A.H.

1983-01-01

Under Australian environmental controls relating to the management of uranium tailings, it is no longer acceptable practice to search for a rehabilitation strategy at the end of production when the generation of tailings has ceased. The uranium projects currently in production and those being proposed are tightly regulated by the authorities. The waste management plans must consider site specific factors and must include selection of appropriate disposal sites and design for long term containment. The final encapsulation in engineered facilities must take into account the probable routes to the environment of the tailings. Rehabilitation shoud be undertaken by the mining and milling operators to standards approved by appropriate authorities. Appropriate administrative arrangements are required, by way of technical committees and financial bonds to ensure that agreed standards of rehabilitation may be achieved. Past and present experience with the rehabilitation of uranium tailings impoundments in Australia is discussed

Cylinder Symmetric Measures with the Tail Property

NARCIS (Netherlands)

Balkema, A.A.

2006-01-01

Abstract: A Pareto distribution has the property that any tail of the distribution has the same shape as the original distribution. The exponential distribution and the uniform distribution have the tail property too. The tail property characterizes the univariate generalized Pareto distributions.

Synthesis of 3,5-diisopropyl[carboxy-14C]salicylic acid and its 67Cu complex

International Nuclear Information System (INIS)

Chidambaram, M.V.; Epperson, C.E.; Williams, S.; Gray, R.A.; Sorenson, J.R.J.

1991-01-01

The synthesis of 3,5-diisopropyl[carboxy- 14 C]salicylic acid was achieved via Kolbe-Schmitt carboxylation of potassium 2,4-di-isopropylphenolate. The yield of this acid was 81% based upon the weight of the product and 93% based upon radioactivity incorporated into the labeled acid which contains 98% 14 C in the carboxyl group (specific activity = 5.1 μCi/mg). The labeled acid was characterized by ultraviolet spectrophotometry and purity established by thin-layer chromatography, autoradiography, and liquid scintillation counting. A 90% yield of the double labeled 14 C, 67 Cu-complex (specific activity = 4.6 μCi 67 Cu/mg) was obtained using conditions developed with non-radioactive reactants. The presence of 67 Cu in this complex was established using γ-ray emission spectrophometry. (author)

Radon emanation characteristics of uranium mill tailings

International Nuclear Information System (INIS)

Nielson, K.K.; Freeman, H.D.; Hartley, J.N.; Mauch, M.L.; Rogers, V.C.

1982-01-01

Radon emanation from uranium mill tailings was examined with respect to the mechanisms of emanation and the physical properties of the tailings which affect emanation. Radon emanation coefficients were measured at ambient moisture on 135 samples from the 1981 field test site at the Grand Junction tailings pile. These coefficients showed a similar trend with moisture to those observed previously with uranium ores, and averaged 0.10 + or - 0.02 at dryness and 0.38 + or - 0.04 for all samples having greater than five weight-percent moisture. Small differences were noted between the maximum values of the coefficients for the sand and slime fractions of the tailings. Separate measurements on tailings from the Vitro tailings pile exhibited much lower emanation coefficients for moist samples, and similar coefficients for dry samples. Alternative emanation measurement techniques were examined and procedures are recommended for use in future work

Crystallographic characterization of the radixin FERM domain bound to the cytoplasmic tail of membrane-type 1 matrix metalloproteinase (MT1-MMP)

International Nuclear Information System (INIS)

Terawaki, Shin-ichi; Kitano, Ken; Aoyama, Miki; Hakoshima, Toshio

2008-01-01

The radixin FERM domain was shown to bind the MT1-MMP cytoplasmic peptide and crystals of the complex were obtained. ERM proteins play a role in the cross-linking found between plasma membranes and actin filaments. The N-terminal FERM domains of ERM proteins are responsible for membrane association through direct interaction with the cytoplasmic tails of integral membrane proteins. During cell migration and movement, membrane-type 1 matrix metalloproteinase (MT1-MMP) on plasma membranes sheds adhesion molecule CD44 in addition to degrading the extracellular matrix. Here, the interaction between the radixin FERM domain and the MT1-MMP cytoplasmic tail is reported and preliminary crystallographic characterization of crystals of the radixin FERM domain bound to the cytoplasmic tail of MT1-MMP is presented. The crystals belong to space group P6 1 22, with unit-cell parameters a = b = 122.7, c = 128.3 Å, and contain one complex in the crystallographic asymmetric unit. The diffraction data were collected to a resolution of 2.4 Å

Heavy mineral concentration from oil sand tailings

Energy Technology Data Exchange (ETDEWEB)

Chachula, F.; Erasmus, N. [Titanium Corp. Inc., Regina, SK (Canada)

2008-07-01

This presentation described a unique technique to recover heavy minerals contained in the froth treatment tailings produced by oil sand mining extraction operations in Fort McMurray, Alberta. In an effort to process waste material into valuable products, Titanium Corporation is developing technology to recover heavy minerals, primarily zircon, and a portion of bitumen contained in the final stage of bitumen processing. The process technology is being developed to apply to all mined oil sands operations in the Fort McMurray region. In 2004, Titanium Corporation commissioned a pilot research facility at the Saskatchewan Research Council to test dry oil sands tailings. In 2005, a bulk sampling pilot plant was connected to the fresh oil sands tailings pipeline on-site in Fort McMurray, where washed sands containing heavy minerals were processed at a pilot facility. The mineral content in both deposited tailings and fresh pipeline tailings was assessed. Analysis of fresh tailings on a daily basis identified a constant proportion of zircon and higher levels of associated bitumen compared with the material in the deposited tailings. The process flow sheet design was then modified to remove bitumen from the heavy minerals and concentrate the minerals. A newly modified flotation process was shown to be a viable processing route to recover the heavy minerals from froth treatment tailings. 8 refs., 9 tabs., 12 figs.

Tail-assisted pitch control in lizards, robots and dinosaurs.

Science.gov (United States)

Libby, Thomas; Moore, Talia Y; Chang-Siu, Evan; Li, Deborah; Cohen, Daniel J; Jusufi, Ardian; Full, Robert J

2012-01-04

In 1969, a palaeontologist proposed that theropod dinosaurs used their tails as dynamic stabilizers during rapid or irregular movements, contributing to their depiction as active and agile predators. Since then the inertia of swinging appendages has been implicated in stabilizing human walking, aiding acrobatic manoeuvres by primates and rodents, and enabling cats to balance on branches. Recent studies on geckos suggest that active tail stabilization occurs during climbing, righting and gliding. By contrast, studies on the effect of lizard tail loss show evidence of a decrease, an increase or no change in performance. Application of a control-theoretic framework could advance our general understanding of inertial appendage use in locomotion. Here we report that lizards control the swing of their tails in a measured manner to redirect angular momentum from their bodies to their tails, stabilizing body attitude in the sagittal plane. We video-recorded Red-Headed Agama lizards (Agama agama) leaping towards a vertical surface by first vaulting onto an obstacle with variable traction to induce a range of perturbations in body angular momentum. To examine a known controlled tail response, we built a lizard-sized robot with an active tail that used sensory feedback to stabilize pitch as it drove off a ramp. Our dynamics model revealed that a body swinging its tail experienced less rotation than a body with a rigid tail, a passively compliant tail or no tail. To compare a range of tails, we calculated tail effectiveness as the amount of tailless body rotation a tail could stabilize. A model Velociraptor mongoliensis supported the initial tail stabilization hypothesis, showing as it did a greater tail effectiveness than the Agama lizards. Leaping lizards show that inertial control of body attitude can advance our understanding of appendage evolution and provide biological inspiration for the next generation of manoeuvrable search-and-rescue robots.

Reclamation and closure of an oil sands tailings facility

Energy Technology Data Exchange (ETDEWEB)

Sobkowicz, J. [Thurber Engineering Ltd., Calgary, AB (Canada); Morgenstern, N. [Alberta Univ., Edmonton, AB (Canada)

2010-07-01

This PowerPoint presentation discussed methods of ensuring the successful reclamation of oil sands tailings facilities. Tailings should be reclaimed as mining proceeds in order to avoid an excessive accumulation of fluid fine tailings (FFT). The volume of mature fine tailings (MFT) in ponds should be limited in order to ensure effective tailings management. The reclaimed landforms should have good geotechnical stability and be comprised of self-sustaining native vegetation. Strength is needed to allow for timely capping and initial reclamation, and stiffness is required to minimize future settlement and to allow for the construction of a closure landscape. Reclamation strategies were presented for fines-dominated tailings; sand-depleted tailings; and sand-dominated tailings. Energy Resources Conservation Board (ERCB) criteria for tailings reclamation were discussed, and various monitoring and performance assessment strategies were presented. tabs., figs.

Collagen turnover after tibial fractures

DEFF Research Database (Denmark)

Joerring, S; Krogsgaard, M; Wilbek, H

1994-01-01

Collagen turnover after tibial fractures was examined in 16 patients with fracture of the tibial diaphysis and in 8 patients with fracture in the tibial condyle area by measuring sequential changes in serological markers of turnover of types I and III collagen for up to 26 weeks after fracture....... The markers were the carboxy-terminal extension peptide of type I procollagen (PICP), the amino-terminal extension peptide of type III procollagen (PIIINP), and the pyridinoline cross-linked carboxy-terminal telopeptide of type I collagen (ICTP). The latter is a new serum marker of degradation of type I...... collagen. A group comparison showed characteristic sequential changes in the turnover of types I and III collagen in fractures of the tibial diaphysis and tibial condyles. The turnover of type III collagen reached a maximum after 2 weeks in both groups. The synthesis of type I collagen reached a maximum...

Active Ebola Virus Replication and Heterogeneous Evolutionary Rates in EVD Survivors

Directory of Open Access Journals (Sweden)

Shannon L.M. Whitmer

2018-01-01

Full Text Available Following cessation of continuous Ebola virus (EBOV transmission within Western Africa, sporadic EBOV disease (EVD cases continued to re-emerge beyond the viral incubation period. Epidemiological and genomic evidence strongly suggests that this represented transmission from EVD survivors. To investigate whether persistent infections are characterized by ongoing viral replication, we sequenced EBOV from the semen of nine EVD survivors and a subset of corresponding acute specimens. EBOV evolutionary rates during persistence were either similar to or reduced relative to acute infection rates. Active EBOV replication/transcription continued during convalescence, but decreased over time, consistent with viral persistence rather than viral latency. Patterns of genetic divergence suggest a moderate relaxation of selective constraints within the sGP carboxy-terminal tail during persistent infections, but do not support widespread diversifying selection. Altogether, our data illustrate that EBOV persistence in semen, urine, and aqueous humor is not a quiescent or latent infection.

Architecture of the RNA polymerase II-Mediator core initiation complex.

Science.gov (United States)

Plaschka, C; Larivière, L; Wenzeck, L; Seizl, M; Hemann, M; Tegunov, D; Petrotchenko, E V; Borchers, C H; Baumeister, W; Herzog, F; Villa, E; Cramer, P

2015-02-19

The conserved co-activator complex Mediator enables regulated transcription initiation by RNA polymerase (Pol) II. Here we reconstitute an active 15-subunit core Mediator (cMed) comprising all essential Mediator subunits from Saccharomyces cerevisiae. The cryo-electron microscopic structure of cMed bound to a core initiation complex was determined at 9.7 Å resolution. cMed binds Pol II around the Rpb4-Rpb7 stalk near the carboxy-terminal domain (CTD). The Mediator head module binds the Pol II dock and the TFIIB ribbon and stabilizes the initiation complex. The Mediator middle module extends to the Pol II foot with a 'plank' that may influence polymerase conformation. The Mediator subunit Med14 forms a 'beam' between the head and middle modules and connects to the tail module that is predicted to bind transcription activators located on upstream DNA. The Mediator 'arm' and 'hook' domains contribute to a 'cradle' that may position the CTD and TFIIH kinase to stimulate Pol II phosphorylation.

A pH-Regulated Quality Control Cycle for Surveillance of Secretory Protein Assembly

Science.gov (United States)

Vavassori, Stefano; Cortini, Margherita; Masui, Shoji; Sannino, Sara; Anelli, Tiziana; Caserta, Imma R.; Fagioli, Claudio; Mossuto, Maria F.; Fornili, Arianna; van Anken, Eelco; Degano, Massimo; Inaba, Kenji; Sitia, Roberto

2013-01-01

Summary To warrant the quality of the secretory proteome, stringent control systems operate at the endoplasmic reticulum (ER)-Golgi interface, preventing the release of nonnative products. Incompletely assembled oligomeric proteins that are deemed correctly folded must rely on additional quality control mechanisms dedicated to proper assembly. Here we unveil how ERp44 cycles between cisGolgi and ER in a pH-regulated manner, patrolling assembly of disulfide-linked oligomers such as IgM and adiponectin. At neutral, ER-equivalent pH, the ERp44 carboxy-terminal tail occludes the substrate-binding site. At the lower pH of the cisGolgi, conformational rearrangements of this peptide, likely involving protonation of ERp44’s active cysteine, simultaneously unmask the substrate binding site and −RDEL motif, allowing capture of orphan secretory protein subunits and ER retrieval via KDEL receptors. The ERp44 assembly control cycle couples secretion fidelity and efficiency downstream of the calnexin/calreticulin and BiP-dependent quality control cycles. PMID:23685074

Mena binds α5 integrin directly and modulates α5β1 function.

Science.gov (United States)

Gupton, Stephanie L; Riquelme, Daisy; Hughes-Alford, Shannon K; Tadros, Jenny; Rudina, Shireen S; Hynes, Richard O; Lauffenburger, Douglas; Gertler, Frank B

2012-08-20

Mena is an Ena/VASP family actin regulator with roles in cell migration, chemotaxis, cell-cell adhesion, tumor cell invasion, and metastasis. Although enriched in focal adhesions, Mena has no established function within these structures. We find that Mena forms an adhesion-regulated complex with α5β1 integrin, a fibronectin receptor involved in cell adhesion, motility, fibronectin fibrillogenesis, signaling, and growth factor receptor trafficking. Mena bound directly to the carboxy-terminal portion of the α5 cytoplasmic tail via a 91-residue region containing 13 five-residue "LERER" repeats. In fibroblasts, the Mena-α5 complex was required for "outside-in" α5β1 functions, including normal phosphorylation of FAK and paxillin and formation of fibrillar adhesions. It also supported fibrillogenesis and cell spreading and controlled cell migration speed. Thus, fibroblasts require Mena for multiple α5β1-dependent processes involving bidirectional interactions between the extracellular matrix and cytoplasmic focal adhesion proteins.

Canadian experience with uranium tailings disposal

International Nuclear Information System (INIS)

Culver, K.B.

1982-06-01

During the first years of uranium production in Canada uranium tailings were discharged directly into valleys or lakes near the mill. Treatment with barium chloride to precipitate radium began in 1965 at the Nordic Mine at Elliot Lake, Ontario. In the mid-60s and early 70s water quality studies indicated that discharges from uranium tailings areas were causing degradation to the upper part of the Serpent River water system. Studies into acid generation, revegetation, and leaching of radium were initiated by the mining companies and resulted in the construction of treatment plants at a number of sites. Abandoned tailings sites were revegetated. At hearings into the expansion of the Elliot Lake operations the issue of tailings management was a major item for discussion. As a result federal and provincial agencies developed guidelines for the siting and development of urnaium tailings areas prior to issuing operating licences. Western Canadian uranium producers do not have the acid generation problem of the Elliot Lake operations. The Rabbit Lake mill uses settling ponds followed by filtration. High-grade tailings from Cluff Lake are sealed in concrete and buried. Uranium producers feel that the interim criteria developed by the Atomic Energy Control Board, if adopted, would have a harmful effect on the viability of the Canadian uranium industry

EST Table: AV404143 [KAIKOcDNA[Archive

Lifescience Database Archive (English)

Full Text Available ructure Of The Tail Terminator Protein From Phage Lambda (Gpu-Wt) pdb|3FZB|B Chain B, Crystal Structure Of T...he Tail Terminator Protein From Phage Lambda (Gpu-Wt) pdb|3FZB|C Chain C, Crystal Structure Of The Tail Term...inator Protein From Phage Lambda (Gpu-Wt) pdb|3FZB|D Chain D, Crystal Structure O...f The Tail Terminator Protein From Phage Lambda (Gpu-Wt) pdb|3FZB|E Chain E, Crystal Structure Of The Tail T...erminator Protein From Phage Lambda (Gpu-Wt) pdb|3FZB|F Chain F, Crystal Structure Of The Tail Terminator Protein From Phage Lambda

On the average configuration of the geomagnetic tail

International Nuclear Information System (INIS)

Fairfield, D.H.

1978-03-01

Over 3000 hours of IMP-6 magnetic field data obtained between 20 and 33 R sub E in the geomagnetic tail have been used in a statistical study of the tail configuration. A distribution of 2.5 minute averages of B sub Z as a function of position across the tail reveals that more flux crosses the equatorial plane near the dawn and dusk flanks than near midnight. The tail field projected in the solar magnetospheric equatorial plane deviates from the X axis due to flaring and solar wind aberration by an angle alpha = -0.9 y sub SM - 1.7, where y/sub SM/ is in earth radii and alpha is in degrees. After removing these effects the Y component of the tail field is found to depend on interplanetary sector structure. During an away sector the B/sub Y/ component of the tail field is on average 0.5 gamma greater than that during a toward sector, a result that is true in both tail lobes and is independent of location across the tail

Understanding AL-PAM assisted oil sands tailings treatment

Energy Technology Data Exchange (ETDEWEB)

Guo, L.; Maham, Y.; Masliyah, J.; Xu, Z. [Alberta Univ., Edmonton, AB (Canada). Dept. of Chemical and Materials Engineering

2010-07-01

Technologies currently used to treat oil sands tailings include the composite tailings (CT) process and the thickened tailings (TT) or paste technology process. This PowerPoint presentation discussed a flocculation and filtration method used to produce stackable tailings deposits. Magnafloc 1011 and AL-PAM additions were used as part of the filtration technique to produce very dry filter cakes. The effect of AL-PAM molecular weight and aluminum content on tailings treatments was investigated as well as the effect of tailings characteristics on the performance of flocculant-assisted tailings filtration processes. The AL-PAM molecular structure was studied. An experimental study was conducted to determine the effect of various polymer additions on fresh tailings from an oil sands plant. The study showed that the optimum dosage for settling and filtration was lower for higher molecular weight AL-PAM. A higher aluminum content was beneficial for settling. Increases in the aluminum content did not improve filtration rates, but reduced optimal dosages. Step-by-step details of the supernatant filtration process were provided, as well as photographs of the laboratory study. tabs., figs.

Proceedings of the 2. international oil sands tailings conference

Energy Technology Data Exchange (ETDEWEB)

NONE

2010-07-01

The tailings produced by oil sands extraction processes pose significant threats to the surrounding environment in addition to releasing greenhouse gases (GHGs) into the atmosphere. Recent directives have been established to reduce the amount of tailings produced at oil sands operations, and to ensure that tailings ponds are reclaimed in the most effective manner. This conference provided a forum for researchers and industry experts to discuss issues related to the management and reclamation of oil sands tailings. New technologies for dewatering tailings ponds were presented, and methods of analyzing the chemical properties of tailings were reviewed. The conference was divided into the following 7 sessions: (1) tailings properties, (2) tailings dewatering, (3) new concepts, (4) water and chemistry, (5) soft tailings stabilization and reclamation, (6) water treatment, and (7) new concepts 2. The conference featured 44 presentations, all of which have been catalogued separately for inclusion in this database. tabs., figs.

Unique structural features facilitate lizard tail autotomy

DEFF Research Database (Denmark)

Sanggaard, Kristian W; Danielsen, Carl Chr; Wogensen, Lise

2012-01-01

Autotomy refers to the voluntary shedding of a body part; a renowned example is tail loss among lizards as a response to attempted predation. Although many aspects of lizard tail autotomy have been studied, the detailed morphology and mechanism remains unclear. In the present study, we showed...... that tail shedding by the Tokay gecko (Gekko gecko) and the associated extracellular matrix (ECM) rupture were independent of proteolysis. Instead, lizard caudal autotomy relied on biological adhesion facilitated by surface microstructures. Results based on bio-imaging techniques demonstrated that the tail...

TAILS N-terminomic and proteomic datasets of healthy human dental pulp

Directory of Open Access Journals (Sweden)

Ulrich Eckhard

2015-12-01

Full Text Available The Data described here provide the in depth proteomic assessment of the human dental pulp proteome and N-terminome (Eckhard et al., 2015 [1]. A total of 9 human dental pulps were processed and analyzed by the positional proteomics technique TAILS (Terminal Amine Isotopic Labeling of Substrates N-terminomics. 38 liquid chromatography tandem mass spectrometry (LC-MS/MS datasets were collected and analyzed using four database search engines in combination with statistical downstream evaluation, to yield the by far largest proteomic and N-terminomic dataset of any dental tissue to date. The raw mass spectrometry data and the corresponding metadata have been deposited in ProteomeXchange with the PXD identifier ; Supplementary Tables described in this article are available via Mendeley Data (10.17632/555j3kk4sw.1.

Study of the oxidation state of arsenic and uranium in individual particles from uranium mine tailings, Hungary

International Nuclear Information System (INIS)

Alsecz, A.; Osan, J.; Palfalvi, J.; Torok, Sz.; Sajo, I.; Mathe, Z.; Simon, R.; Falkenberg, G.

2007-01-01

Uranium ore mining and milling have been terminated in the Mecsek Mountains (southwest Hungary) in 1997. Mine tailings ponds are located between two important water bases, which are resources of the drinking water of the city of Pecs and the neighbouring villages. The average U concentration of the tailings material is 71.73 μg/g, but it is inhomogeneous. Some microscopic particles contain orders of magnitude more U than the rest of the tailings material. Other potentially toxic elements are As and Pb of which chemical state is important to estimate mobility, because in mobile form they can risk the water basis and the public health. Individual U-rich particles were selected with solid state nuclear track detector (SSNTD) and after localisation the particles were investigated by synchrotron radiation based microanalytical techniques. The distribution of elements over the particles was studied by micro beam X-ray fluorescence (μ-XRF) and the oxidation state of uranium and arsenic was determined by micro X-ray absorption near edge structure (μ-XANES) spectroscopy. Some of the measured U-rich particles were chosen for studying the heterogeneity with μ-XRF tomography. Arsenic was present mainly in As(V) and uranium in U(VI) form in the original uranium ore particles, but in the mine tailings samples uranium was present mainly in the less mobile U(IV) form. Correlation was found between the oxidation state of As and U in the same analyzed particles. These results suggest that dissolution of uranium is not expected in short term period. (authors)

Health risks from uranium mill tailings

International Nuclear Information System (INIS)

Russell, J.L.

1992-01-01

This paper reviews the risk to public health and the environment from uranium mill tailings. The steps taken by the Environmental Protection Agency (EPA) to reduce this risk from tailing are summarized

Big picture thinking in oil sands tailings disposal

Energy Technology Data Exchange (ETDEWEB)

Boswell, J. [Thurber Engineering Ltd., Calgary, AB (Canada)

2010-07-01

This PowerPoint presentation discussed methods of disposing oil sands tailings. Oil sands operators are currently challenged by a variety of legislative and environmental factors concerning the creation and disposal of oil sands tailings. The media has focused on the negative ecological impact of oil sands production, and technical issues are reducing the effect of some mitigation processes. Operators must learn to manage the interface between tailings production and removal, the environment, and public opinion. The successful management of oil sand tailings will include procedures designed to improve reclamation processes, understand environmental laws and regulations, and ensure that the cumulative impacts of tailings are mitigated. Geotechnical investigations, engineering designs and various auditing procedures can be used to develop tailings management plans. Environmental screening and impact assessments can be used to develop sustainable solutions. Public participation and environmental mediation is needed to integrate the public, environmental and technical tailings management strategies. Operators must ensure public accountability for all stakeholders. tabs., figs.

Quasi-steady state aerodynamics of the cheetah tail

Directory of Open Access Journals (Sweden)

Amir Patel

2016-08-01

Full Text Available During high-speed pursuit of prey, the cheetah (Acinonyx jubatus has been observed to swing its tail while manoeuvring (e.g. turning or braking but the effect of these complex motions is not well understood. This study demonstrates the potential of the cheetah's long, furry tail to impart torques and forces on the body as a result of aerodynamic effects, in addition to the well-known inertial effects. The first-order aerodynamic forces on the tail are quantified through wind tunnel testing and it is observed that the fur nearly doubles the effective frontal area of the tail without much mass penalty. Simple dynamic models provide insight into manoeuvrability via simulation of pitch, roll and yaw tail motion primitives. The inertial and quasi-steady state aerodynamic effects of tail actuation are quantified and compared by calculating the angular impulse imparted onto the cheetah's body and its shown aerodynamic effects contribute to the tail's angular impulse, especially at the highest forward velocities.

Research on uranium tailings disposal technology at CANMET, Ottawa

International Nuclear Information System (INIS)

Skeaff, J.M.; Ritcey, G.M.; Jongejan, A.; Silver, M.

1982-01-01

In this paper, results from three continuing investigations at CANMET on uranium tailings management are presented. These investigations are: cleaning of tailings by flotation, conversion of municipal wastes into compost for use as topsoil on uranium tailings, methods for the chemical fixation of uranium tailings and a laboratory determination of the rate of release of environmental contaminants from uranium tailings

Nucleotide sequence of a cDNA coding for the amino-terminal region of human prepro. alpha. 1(III) collagen

Energy Technology Data Exchange (ETDEWEB)

Toman, P D; Ricca, G A [Rorer Biotechnology, Inc., Springfield, VA (USA); de Crombrugghe, B [National Institutes of Health, Bethesda, MD (USA)

1988-07-25

Type III Collagen is synthesized in a variety of tissues as a precursor macromolecule containing a leader sequence, a N-propeptide, a N-telopeptide, the triple helical region, a C-telopeptide, and C-propeptide. To further characterize the human type III collagen precursor, a human placental cDNA library was constructed in gt11 using an oligonucleotide derived from a partial cDNA sequence corresponding to the carboxy-terminal part of the 1(III) collagen. A cDNA was identified which contains the leader sequence, the N-propeptide and N-telopeptide regions. The DNA sequence of these regions are presented here. The triple helical, C-telopeptide and C-propeptide amino acid sequence for human type III collagen has been determined previously. A comparison of the human amino acid sequence with mouse, chicken, and calf sequence shows 81%, 81%, and 92% similarity, respectively. At the DNA level, the sequence similarity between human and mouse or chicken type III collagen sequences in this area is 82% and 77%, respectively.

Consistency based correlations for tailings consolidation

Energy Technology Data Exchange (ETDEWEB)

Azam, S.; Paul, A.C. [Regina Univ., Regina, SK (Canada). Environmental Systems Engineering

2010-07-01

The extraction of oil, uranium, metals and mineral resources from the earth generates significant amounts of tailings slurry. The tailings are contained in a disposal area with perimeter dykes constructed from the coarser fraction of the slurry. There are many unique challenges pertaining to the management of the containment facilities for several decades beyond mine closure that are a result of the slow settling rates of the fines and the high standing toxic waters. Many tailings dam failures in different parts of the world have been reported to result in significant contaminant releases causing public concern over the conventional practice of tailings disposal. Therefore, in order to reduce and minimize the environmental footprint, the fluid tailings need to undergo efficient consolidation. This paper presented an investigation into the consolidation behaviour of tailings in conjunction with soil consistency that captured physicochemical interactions. The paper discussed the large strain consolidation behaviour (volume compressibility and hydraulic conductivity) of six fine-grained soil slurries based on published data. The paper provided background information on the study and presented the research methodology. The geotechnical index properties of the selected materials were also presented. The large strain consolidation, volume compressibility correlations, and hydraulic conductivity correlations were provided. It was concluded that the normalized void ratio best described volume compressibility whereas liquidity index best explained the hydraulic conductivity. 17 refs., 3 tabs., 4 figs.

Geophysical applications for oil sand mine tailings management

Energy Technology Data Exchange (ETDEWEB)

Parker, D.; Bauman, P. [WorleyParsons, Calgary, AB (Canada)

2009-07-01

Geophysical techniques are applied throughout a mine's life cycle to facilitate siting, constructing and monitoring of tailings dumps and ponds. This presentation described 3 case studies from the Athabasca region in northeast Alberta that demonstrated some of the concerns associated with oil sand mine tailings, and the information that geophysical surveys can provide. The objectives of these studies were to determine the lateral and depth extents of elevated conductivities of soil and groundwater that have high salt concentration from the tailings sand pore fluid. Due to high chloride concentrations within the tailings material, salt within the root zone may affect vegetation. A terrain conductivity survey was designed to map the lateral extents of salinity impact, while an electrical resistivity tomography (ERT) survey was used to delineate the tailings sand leachate at depth. The proper management of oil sand tailings facilities is vital to the life cycle of a mine. It was concluded that geophysical techniques can be instrumental in managing several engineering and environmental challenges, from Pleistocene channel mapping, to tailings pond settling characteristics, to reclaiming tailings sands. 1 ref., 7 figs.

Engineering assessment of inactive uranium mill tailings

Energy Technology Data Exchange (ETDEWEB)

1981-07-01

The Grand Junction site has been reevaluated in order to revise the October 1977 engineering assessment of the problems resulting from the existence of radioactive uranium mill tailings at Grand Junction, Colorado. This engineering assessment has included the preparation of topographic maps, the performance of core drillings and radiometric measurements sufficient to determine areas and volumes of tailings and radiation exposures of individuals and nearby populations, the investigations of site hydrology and meteorology, and the evaluation and costing of alternative corrective actions. Radon gas released from the 1.9 million tons of tailings at the Grand Junction site constitutes the most significant environmental impact, although windblown tailings and external gamma radiation are also factors. The eight alternative actions presented herein range from millsite and off-site decontamination with the addition of 3 m of stabilization cover material (Option I), to removal of the tailings to remote disposal sites and decontamination of the tailings site (Options II through VIII). Cost estimates for the eight options range from about $10,200,000 for stabilization in-place to about $39,500,000 for disposal in the DeBeque area, at a distance of about 35 mi, using transportation by rail. If transportation to DeBeque were by truck, the cost estimated to be about $41,900,000. Three principal alternatives for the reprocessing of the Grand Junction tailings were examined: (a) heap leaching; (b) treatment at an existing mill; and (c) reprocessing at a new conventional mill constructed for tailings reprocessing. The cost of the uranium recovered would be about $200/lb by heap leach and $150/lb by conventional plant processes. The spot market price for uranium was $25/lb early in 1981. Therefore, reprocessing the tailings for uranium recovery appears not to be economically attractive.

Engineering assessment of inactive uranium mill tailings

International Nuclear Information System (INIS)

1981-07-01

The Grand Junction site has been reevaluated in order to revise the October 1977 engineering assessment of the problems resulting from the existence of radioactive uranium mill tailings at Grand Junction, Colorado. This engineering assessment has included the preparation of topographic maps, the performance of core drillings and radiometric measurements sufficient to determine areas and volumes of tailings and radiation exposures of individuals and nearby populations, the investigations of site hydrology and meteorology, and the evaluation and costing of alternative corrective actions. Radon gas released from the 1.9 million tons of tailings at the Grand Junction site constitutes the most significant environmental impact, although windblown tailings and external gamma radiation are also factors. The eight alternative actions presented herein range from millsite and off-site decontamination with the addition of 3 m of stabilization cover material (Option I), to removal of the tailings to remote disposal sites and decontamination of the tailings site (Options II through VIII). Cost estimates for the eight options range from about $10,200,000 for stabilization in-place to about $39,500,000 for disposal in the DeBeque area, at a distance of about 35 mi, using transportation by rail. If transportation to DeBeque were by truck, the cost estimated to be about $41,900,000. Three principal alternatives for the reprocessing of the Grand Junction tailings were examined: (a) heap leaching; (b) treatment at an existing mill; and (c) reprocessing at a new conventional mill constructed for tailings reprocessing. The cost of the uranium recovered would be about $200/lb by heap leach and $150/lb by conventional plant processes. The spot market price for uranium was $25/lb early in 1981. Therefore, reprocessing the tailings for uranium recovery appears not to be economically attractive

Four tails problems for dynamical collapse theories

Science.gov (United States)

McQueen, Kelvin J.

2015-02-01

The primary quantum mechanical equation of motion entails that measurements typically do not have determinate outcomes, but result in superpositions of all possible outcomes. Dynamical collapse theories (e.g. GRW) supplement this equation with a stochastic Gaussian collapse function, intended to collapse the superposition of outcomes into one outcome. But the Gaussian collapses are imperfect in a way that leaves the superpositions intact. This is the tails problem. There are several ways of making this problem more precise. But many authors dismiss the problem without considering the more severe formulations. Here I distinguish four distinct tails problems. The first (bare tails problem) and second (structured tails problem) exist in the literature. I argue that while the first is a pseudo-problem, the second has not been adequately addressed. The third (multiverse tails problem) reformulates the second to account for recently discovered dynamical consequences of collapse. Finally the fourth (tails problem dilemma) shows that solving the third by replacing the Gaussian with a non-Gaussian collapse function introduces new conflict with relativity theory.

A Note on Upper Tail Behavior of Liouville Copulas

Directory of Open Access Journals (Sweden)

Lei Hua

2016-11-01

Full Text Available The family of Liouville copulas is defined as the survival copulas of multivariate Liouville distributions, and it covers the Archimedean copulas constructed by Williamson’s d-transform. Liouville copulas provide a very wide range of dependence ranging from positive to negative dependence in the upper tails, and they can be useful in modeling tail risks. In this article, we study the upper tail behavior of Liouville copulas through their upper tail orders. Tail orders of a more general scale mixture model that covers Liouville distributions is first derived, and then tail order functions and tail order density functions of Liouville copulas are derived. Concrete examples are given after the main results.

Solar wind interaction with type-1 comet tails

International Nuclear Information System (INIS)

Ershkovich, A.I.

1977-01-01

A comet tail is considered as a plasma cylinder separated by a tangential discontinuity surface from the solar wind. Under typical conditions a comet tail boundary is shown to undergo the Kelvin-Helmholtz instability. With infinite amplitude the stabilizing effect of the magnetic field increases, and waves become stable. The proposed model supplies the detailed quantitative description of helical waves observed in type-1 comet tails. This theory enables the evaluation of the comet tail magnetic field by means of the observations of helical waves. The magnetic field in the comet tail turns out to be of the order of the interplanetary field. This conclusion seems to be in accordance with Alfven's idea that the magnetic field in type-1 comet tails is a captured interplanetary field. (Auth.)

Uranium mill tailings

International Nuclear Information System (INIS)

McLaren, L.H.

1982-11-01

This bibliography contains information on uranium mill tailings included in the Department of Energy's Energy Data Base from January 1981 through October 1982. The abstracts are grouped by subject category as shown in the table of contents. Entries in the subject index also facilitate access by subject, e.g., Mill Tailings/Radiation Hazards. Within each category the arrangement is by report number for reports, followed by nonreports in reverse chronological order. These citations are to research reports, journal articles, books, patents, theses, and conference papers from worldwide sources. Five indexes, each preceded by a brief description, are provided: Corporate Author, Personal Author, Subject, Contract Number, and Report Number. (335 abstracts)

Heavy Tail Behavior of Rainfall Extremes across Germany

Science.gov (United States)

Castellarin, A.; Kreibich, H.; Vorogushyn, S.; Merz, B.

2017-12-01

Distributions are termed heavy-tailed if extreme values are more likely than would be predicted by probability distributions that have exponential asymptotic behavior. Heavy-tail behavior often leads to surprise, because historical observations can be a poor guide for the future. Heavy-tail behavior seems to be widespread for hydro-meteorological extremes, such as extreme rainfall and flood events. To date there have been only vague hints to explain under which conditions these extremes show heavy-tail behavior. We use an observational data set consisting of 11 climate variables at 1440 stations across Germany. This homogenized, gap-free data set covers 110 years (1901-2010) at daily resolution. We estimate the upper tail behavior, including its uncertainty interval, of daily precipitation extremes for the 1,440 stations at the annual and seasonal time scales. Different tail indicators are tested, including the shape parameter of the Generalized Extreme Value distribution, the upper tail ratio and the obesity index. In a further step, we explore to which extent the tail behavior can be explained by geographical and climate factors. A large number of characteristics is derived, such as station elevation, degree of continentality, aridity, measures for quantifying the variability of humidity and wind velocity, or event-triggering large-scale atmospheric situation. The link between the upper tail behavior and these characteristics is investigated via data mining methods capable of detecting non-linear relationships in large data sets. This exceptionally rich observational data set, in terms of number of stations, length of time series and number of explaining variables, allows insights into the upper tail behavior which is rarely possible given the typical observational data sets available.

Cyclin dependent kinase 5 regulates endocytosis in nerve terminals via dynamin I phosphorylation

International Nuclear Information System (INIS)

Tan, T.C.; Hansra, G.; Calova, V.; Cousin, M.; Robinson, P.J.

2002-01-01

Full text: Synaptic vesicle endocytosis (SVE) in nerve terminals is essential for normal synaptic transmission and for memory retrieval. Dynamin I is a 96kDa nerve terminal phosphoprotein necessary for synaptic vesicle endocytosis in the nerve terminal. Dynamin I is dephosphorylated and rephosphorylated in a cyclical fashion with nerve terminal depolarisation and repolarisation. A number of kinases phosphorylate dynamin I in vitro including PKC, MAP kinase and cdc2. PKC phosphorylates dynamin in the proline rich domain on Ser 795 and is also thought to be the in vivo kinase for dynamin I. Another candidate is the neuron specific kinase cdk5, crucial for CNS development. The aim of this study is to identify the kinase which phosphorylates dynamin I in intact nerve terminals. Here we show that cyclin-dependent kinase 5 (cdk5) phosphorylates dynamin I in the proline-rich tail on Ser-774 or Ser-778. The phosphorylation of these sites but not Ser-795 also occurred in intact nerve terminals suggesting that cdk5 is the physiologically relevant enzyme for dynamin I. Synaptosomes prepared from rat brains (after cervical dislocations) and labelled with 32 Pi, were incubated with 100 M roscovitine (a selective inhibitor of cdks), 10 M Ro 31-8220 (a selective PKC inhibitor) and 100 M PD 98059 (a MEK kinase inhibitor). Dynamin rephosphorylation during repolarisation was reduced in synaptosomes treated with roscovitine and Ro 38-8220 but not in synaptosomes treated with PD 98059. Fluorimetric experiments on intact synaptosomes utilising FM-210 (a fluorescent dye) indicate that endocytosis was reduced in synaptosomes treated with 100 M roscovitine. Our results suggest that dynamin phosphorylation in intact nerve terminals may not be regulated by PKC or MAP kinase and that dynamin phosphorylation by cdk5 may regulate endocytosis. Copyright (2002) Australian Neuroscience Society

Quasi-steady state aerodynamics of the cheetah tail.

Science.gov (United States)

Patel, Amir; Boje, Edward; Fisher, Callen; Louis, Leeann; Lane, Emily

2016-08-15

During high-speed pursuit of prey, the cheetah (Acinonyx jubatus) has been observed to swing its tail while manoeuvring (e.g. turning or braking) but the effect of these complex motions is not well understood. This study demonstrates the potential of the cheetah's long, furry tail to impart torques and forces on the body as a result of aerodynamic effects, in addition to the well-known inertial effects. The first-order aerodynamic forces on the tail are quantified through wind tunnel testing and it is observed that the fur nearly doubles the effective frontal area of the tail without much mass penalty. Simple dynamic models provide insight into manoeuvrability via simulation of pitch, roll and yaw tail motion primitives. The inertial and quasi-steady state aerodynamic effects of tail actuation are quantified and compared by calculating the angular impulse imparted onto the cheetah's body and its shown aerodynamic effects contribute to the tail's angular impulse, especially at the highest forward velocities. © 2016. Published by The Company of Biologists Ltd.

Utilization of mine tailings as partial cement replacement

DEFF Research Database (Denmark)

Sigvardsen, Nina Marie; Nielsen, M.R.; Ottosen, Lisbeth M.

2017-01-01

Depositing mine tailings entail major economic costs and negative environmental impacts. Thus finding an alternative to depositing is of interest. This study focused on the use of mine tailings as partial cement replacement, thereby preventing depositing the mine tailings. At the same time......, such use would reduce the CO2 emission related to the production of cement. Mine tailings from two different mines Zinkgruvan (Sweden) and Nalunaq (Greenland) were both tested as 5 and 10 % cement replacement. All mortar specimens with mine tailings had lower compressive strength compared to a reference...... compared to a specimen containing a 10 % replacement of cement with coal fly ash, commonly used in Denmark. The compressive strength of specimens containing mine tailings exceeded the compressive strength of the specimen containing coal fly ash, indicating further the amorphous content of volcanic decent...

The Sodium Tail of the Moon

Science.gov (United States)

Matta, M.; Smith, S.; Baumgardner, J.; Wilson, J.; Martinis, C.; Mendillo, M.

2009-01-01

During the few days centered about new Moon, the lunar surface is optically hidden from Earth-based observers. However, the Moon still offers an observable: an extended sodium tail. The lunar sodium tail is the escaping "hot" component of a coma-like exosphere of sodium generated by photon-stimulated desorption, solar wind sputtering and meteoroid impact. Neutral sodium atoms escaping lunar gravity experience solar radiation pressure that drives them into the anti-solar direction forming a comet-like tail. During new Moon time, the geometry of the Sun, Moon and Earth is such that the anti-sunward sodium flux is perturbed by the terrestrial gravitational field resulting in its focusing into a dense core that extends beyond the Earth. An all-sky camera situated at the El Leoncito Observatory (CASLEO) in Argentina has been successfully imaging this tail through a sodium filter at each lunation since April 2006. This paper reports on the results of the brightness of the lunar sodium tail spanning 31 lunations between April 2006 and September 2008. Brightness variability trends are compared with both sporadic and shower meteor activity, solar wind proton energy flux and solar near ultra violet (NUV) patterns for possible correlations. Results suggest minimal variability in the brightness of the observed lunar sodium tail, generally uncorrelated with any single source, yet consistent with a multi-year period of minimal solar activity and non-intense meteoric fluxes.

Blast densification trials for oilsands tailings

Energy Technology Data Exchange (ETDEWEB)

Port, A. [Klohn Crippen Berger Ltd., Vancouver, BC (Canada); Martens, S. [Klohn Crippen Berger Ltd., Calgary, AB (Canada); Eaton, T. [Shell Canada Ltd., Calgary, AB (Canada)

2010-07-01

The Shell Canada Muskeg River Mine External Tailings Facility (ETF) is an upstream constructed tailings facility located near Fort McMurray, Alberta. Raises have incrementally stepped out over the beach since construction of the starter dam and deposition within standing water has left some parts of the beach in a loose state. In order to assess the effectiveness of blast densification, a blast densification trial program that was conducted in 2006 at the ETF. The primary purpose of the test program was to determine the effectiveness of blast densification in tailings containing layers and zones of bitumen. The paper described the site characterization and explosive compaction trial program, with particular reference to test layout; drilling methodology; and blasting and timing sequence. The paper also described the instrumentation, including the seismographs; high pressure electric piezometers; low pressure electric piezometers; vibrating wire piezometers; inclinometers; settlement gauges; and surveys. Trial observations and post-trial observations were also presented. It was concluded that controlled blasting techniques could be used to safely induce liquefaction in localized areas within the tailings deposit, with a resulting increase in the tailings density. 5 refs., 1 tab., 14 figs.

Estimating contaminant discharge rates from stabilized uranium tailings embankments

International Nuclear Information System (INIS)

Weber, M.F.

1986-01-01

Estimates of contaminant discharge rates from stabilized uranium tailings embankments are essential in evaluating long-term impacts of tailings disposal on groundwater resources. Contaminant discharge rates are a function of water flux through tailings covers, the mass and distribution of tailings, and the concentrations of contaminants in percolating pore fluids. Simple calculations, laboratory and field testing, and analytical and numerical modeling may be used to estimate water flux through variably-saturated tailings under steady-state conditions, which develop after consolidation and dewatering have essentially ceased. Contaminant concentrations in water discharging from the tailings depend on tailings composition, leachability and solubility of contaminants, geochemical conditions within the embankment, tailings-water interactions, and flux of water through the embankment. These concentrations may be estimated based on maximum reported concentrations, pore water concentrations, extrapolations of column leaching data, or geochemical equilibria and reaction pathway modeling. Attempts to estimate contaminant discharge rates should begin with simple, conservative calculations and progress to more-complicated approaches, as necessary

Tailings dams from the perspective of conventional dam engineering

International Nuclear Information System (INIS)

Szymanski, M.B.

1999-01-01

A guideline intended for conventional dams such as hydroelectric, water supply, flood control, or irrigation is used sometimes for evaluating the safety of a tailings dam. Differences between tailings dams and conventional dams are often substantial and, as such, should not be overlooked when applying the techniques or safety requirements of conventional dam engineering to tailings dams. Having a dam safety evaluation program developed specifically for tailings dams is essential, if only to reduce the chance of potential errors or omissions that might occur when relying on conventional dam engineering practice. This is not to deny the merits of using the Canadian Dam Safety Association Guidelines (CDSA) and similar conventional dam guidelines for evaluating the safety of tailings dams. Rather it is intended as a warning, and as a rationale underlying basic requirement of tailings dam emgineering: specific experience in tailings dams is essential when applying conventional dam engineering practice. A discussion is included that focuses on the more remarkable tailings dam safety practics. It is not addressed to a technical publications intended for such dams, or significantly different so that the use of conventional dam engineering practice would not be appropriate. The CDSA Guidelines were recently revised to include tailings dams. But incorporating tailings dams into the 1999 revision of the CDSA Guidelines is a first step only - further revision is necessary with respect to tailings dams. 11 refs., 2 tabs

Uncovering a Role for the Tail of the Dictyostelium discoideum SadA Protein in Cell-Substrate Adhesion ▿ †

OpenAIRE

Kowal, Anthony S.; Chisholm, Rex L.

2011-01-01

Previous work from our laboratory showed that the Dictyostelium discoideum SadA protein plays a central role in cell-substrate adhesion. SadA null cells exhibit a loss of adhesion, a disrupted actin cytoskeleton, and a cytokinesis defect. How SadA mediates these phenotypes is unknown. This work addresses the mechanism of SadA function, demonstrating an important role for the C-terminal cytoplasmic tail in SadA function. We found that a SadA tailless mutant was unable to rescue the sadA adhesi...

Collisional relaxation of electron tail distribution

International Nuclear Information System (INIS)

Yamagiwa, Mitsuru; Okamoto, Masao.

1985-05-01

Relaxation due to the Coulomb collisions of the electron velocity distribution function with a high energy tail is investigated in detail. In the course of the relaxation, a 'saddle' point can be created in velocity space owing to upsilon -3 dependence of the deflection rate and a positive slope or a 'dip' appears in the tail direction. The time evolution of the electron tail is studied analytically. A comparison is made with numerical results by using a Fokker-Planck code. Also discussed is the kinetic instability concerned with the positive slope during the relaxation. (author)

Why are most EU pigs tail docked?

DEFF Research Database (Denmark)

D'eath, R.B.; Niemi, J.K.; Vosough Ahmadi, B.

2016-01-01

To limit tail biting incidence, most pig producers in Europe tail dock their piglets. This is despite EU Council Directive 2008/120/EC banning routine tail docking and allowing it only as a last resort. The paper aims to understand what it takes to fulfil the intentions of the Directive...... by examining economic results of four management and housing scenarios, and by discussing their consequences for animal welfare in the light of legal and ethical considerations. The four scenarios compared are: ‘Standard Docked’, a conventional housing scenario with tail docking meeting the recommendations...... for Danish production (0.7 m2/pig); ‘Standard Undocked’, which is the same as ‘Standard Docked’ but with no tail docking, ‘Efficient Undocked’ and ‘Enhanced Undocked’, which have increased solid floor area (0.9 and 1.0 m2/pig, respectively) provision of loose manipulable materials (100 and 200 g/straw per...

Unique structural features facilitate lizard tail autotomy.

Science.gov (United States)

Sanggaard, Kristian W; Danielsen, Carl Chr; Wogensen, Lise; Vinding, Mads S; Rydtoft, Louise M; Mortensen, Martin B; Karring, Henrik; Nielsen, Niels Chr; Wang, Tobias; Thøgersen, Ida B; Enghild, Jan J

2012-01-01

Autotomy refers to the voluntary shedding of a body part; a renowned example is tail loss among lizards as a response to attempted predation. Although many aspects of lizard tail autotomy have been studied, the detailed morphology and mechanism remains unclear. In the present study, we showed that tail shedding by the Tokay gecko (Gekko gecko) and the associated extracellular matrix (ECM) rupture were independent of proteolysis. Instead, lizard caudal autotomy relied on biological adhesion facilitated by surface microstructures. Results based on bio-imaging techniques demonstrated that the tail of Gekko gecko was pre-severed at distinct sites and that its structural integrity depended on the adhesion between these segments.

Basic description of tailings from Aitik focusing on mechanical behavior

OpenAIRE

Bhanbhro, Riaz; Knutsson, Roger; Rodriguez, Juan; Edeskär, Tommy; Knutsson, Sven

2013-01-01

Tailings are artificial granular materials that behave different as compared to natural soil of equal grain sizes. Tailings particle sizes, shapes, gradation and mechanical behavior may influence the performance of tailings dams. Hence it is essential to understand the tailings materials in depth. This article describes present studies being carried out on Aitik tailings. Basic tailings characteristics including specific gravity, phase relationships, particle sizes, particle shapes and direct...

A new procedure for deep sea mining tailings disposal

OpenAIRE

Ma, W.; Schott, D.L.; Lodewijks, G.

2017-01-01

Deep sea mining tailings disposal is a new environmental challenge related to water pollution, mineral crust waste handling, and ocean biology. The objective of this paper is to propose a new tailings disposal procedure for the deep sea mining industry. Through comparisons of the tailings disposal methods which exist in on-land mining and the coastal mining fields, a new tailings disposal procedure, i.e., the submarine–backfill–dam–reuse (SBDR) tailings disposal procedure, is proposed. It com...

Metal mobilization under alkaline conditions in ash-covered tailings.

Science.gov (United States)

Lu, Jinmei; Alakangas, Lena; Wanhainen, Christina

2014-06-15

The aim of this study was to determine element mobilization and accumulation in mill tailings under alkaline conditions. The tailings were covered with 50 cm of fly ash, and above a sludge layer. The tailings were geochemically and mineralogically investigated. Sulfides, such as pyrrhotite, sphalerite and galena along with gangue minerals such as dolomite, calcite, micas, chlorite, epidote, Mn-pyroxene and rhodonite were identified in the unoxidized tailings. The dissolution of the fly ash layer resulted in a high pH (close to 12) in the underlying tailings. This, together with the presence of organic matter, increased the weathering of the tailings and mobilization of elements in the uppermost 47 cm of the tailings. All primary minerals were depleted, except quartz and feldspar which were covered by blurry secondary carbonates. Sulfide-associated elements such as Cd, Fe, Pb, S and Zn and silicate-associated elements such as Fe, Mg and Mn were released from the depletion zone and accumulated deeper down in the tailings where the pH decreased to circum-neutral. Sequential extraction suggests that Cd, Cu, Fe, Pb, S and Zn were retained deeper down in the tailings and were mainly associated with the sulfide phase. Calcium, Cr, K and Ni released from the ash layer were accumulated in the uppermost depletion zone of the tailings. Copyright © 2014 Elsevier Ltd. All rights reserved.

The radiological impacts of uranium mill tailings - a review with special emphasis on the tailings at Ranstad in Sweden

International Nuclear Information System (INIS)

Snihs, J.O.; Agnedal, P.O.

1978-07-01

The environmental impact of uranium mill tailings can be expressed in collective dose commitment and corresponding detriment per MWsub(e).Y energy produced by the uranium which corresponds to the amount of waste of interest. The methods of dose commitment calculations are discussed and it is suggested for the purpose of estimation of the detriment to limit the commitment to 10,000 years. The external radiation from the tailings is easily reduced by covering but in case of a future settlement on the tailings the collective dose commitment will be some hundreds to thousands of manrad/MWsub(e).Y depending on the quality of the uranium ore. The dispersion of dust from uncovered tailings is mainly a local problem and the collective dose commitment for critical tissues in the lung will be less than a manrad/MWsub(e).Y. In the long run the cover may be lost and the resultant collective dose commitment for the critical tissues in the lung will be a few tens of manrad/MWsub(e).Y depending on the quality of the tailings. The effects of global dispersion of the material in the tailings are also discussed

Ilmenite Mineral's Recovery from Beach Sand Tailings

International Nuclear Information System (INIS)

Mulaba-Bafubiandi, Antoine F.; Mukendi-Ngalula, David; Waanders, Frans B.

2002-01-01

The mineral ilmenite is the major source of rutile for industrial use and is of interest to paint and fertiliser industries. Enormous unutilised tailing dams lie on the eastern coast of the South Africa. Although covered by a simulation of the original indigenous vegetation, these tailings are still ilmenite bearing and of economic value. Tailings emanating from beach sand mineral slimes dams of the Kwazulu-Natal area (South Africa) have been processed. Screening, flotation, spiral concentration and magnetic separation methods were used either separately or successively. The present work sheds light on alternative routes for the extraction of the ilmenite, from these tailings. It moreover points out the usefulness of the Moessbauer spectroscopy in the mineral processing product monitoring. Tailings from the beach sands were used in the present study after the economic industrial minerals zirconia, ilmenite and rutile had been extracted in previous mining operations. About 61% natural ilmenite recovery was observed in the flotation concentrate of a Humphrey Spiral concentrate while a 62% recovery of hematite was found in the flotation tailings. The combination of screening, spiral concentration and magnetic separation, and flotation yielded a product with the highest ilmenite and hematite concentration being 71% and 19%, respectively. A natural ilmenite mineral, containing 87% ilmenite and 13% hematite, could be produced and extracted from the tailings of the flotation process, collected subsequently to the spiral concentration and the initial screening.

P22 Arc repressor: enhanced expression of unstable mutants by addition of polar C-terminal sequences.

OpenAIRE

Milla, M. E.; Brown, B. M.; Sauer, R. T.

1993-01-01

Many mutant variants of the P22 Arc repressor are subject to intracellular proteolysis in Escherichia coli, which precludes their expression at levels sufficient for purification and subsequent biochemical characterization. Here we examine the effects of several different C-terminal extension sequences on the expression and activity of a set of Arc mutants. We show that two tail sequences, KNQHE (st5) and H6KNQHE (st11), increase the expression levels of most mutants from 10- to 20-fold and, ...

C-terminal motif prediction in eukaryotic proteomes using comparative genomics and statistical over-representation across protein families

Directory of Open Access Journals (Sweden)

Cutler Sean R

2007-06-01

Full Text Available Abstract Background The carboxy termini of proteins are a frequent site of activity for a variety of biologically important functions, ranging from post-translational modification to protein targeting. Several short peptide motifs involved in protein sorting roles and dependent upon their proximity to the C-terminus for proper function have already been characterized. As a limited number of such motifs have been identified, the potential exists for genome-wide statistical analysis and comparative genomics to reveal novel peptide signatures functioning in a C-terminal dependent manner. We have applied a novel methodology to the prediction of C-terminal-anchored peptide motifs involving a simple z-statistic and several techniques for improving the signal-to-noise ratio. Results We examined the statistical over-representation of position-specific C-terminal tripeptides in 7 eukaryotic proteomes. Sequence randomization models and simple-sequence masking were applied to the successful reduction of background noise. Similarly, as C-terminal homology among members of large protein families may artificially inflate tripeptide counts in an irrelevant and obfuscating manner, gene-family clustering was performed prior to the analysis in order to assess tripeptide over-representation across protein families as opposed to across all proteins. Finally, comparative genomics was used to identify tripeptides significantly occurring in multiple species. This approach has been able to predict, to our knowledge, all C-terminally anchored targeting motifs present in the literature. These include the PTS1 peroxisomal targeting signal (SKL*, the ER-retention signal (K/HDEL*, the ER-retrieval signal for membrane bound proteins (KKxx*, the prenylation signal (CC* and the CaaX box prenylation motif. In addition to a high statistical over-representation of these known motifs, a collection of significant tripeptides with a high propensity for biological function exists

Chaperone role for proteins p618 and p892 in the extracellular tail development of Acidianus two-tailed virus

DEFF Research Database (Denmark)

Scheele, Urte; Erdmann, Susanne; Ungewickell, Ernst J.

2011-01-01

The crenarchaeal Acidianus two-tailed virus (ATV) undergoes a remarkable morphological development, extracellularly and independently of host cells, by growing long tails at each end of a spindle-shaped virus particle. Initial work suggested that an intermediate filament-like protein, p800...... the interactions observed between the different protein and DNA components and to explain their possible structural and functional roles in extracellular tail development....

Fat-tailed distributions data, diagnostics and dependence

CERN Document Server

Cooke, Roger M; Misiewicz, Jolanta

2014-01-01

This title is written for the numerate nonspecialist, and hopes to serve three purposes. First it gathers mathematical material from diverse but related fields of order statistics, records, extreme value theory, majorization, regular variation and subexponentiality. All of these are relevant for understanding fat tails, but they are not, to our knowledge, brought together in a single source for the target readership. Proofs that give insight are included, but for most fussy calculations the reader is referred to the excellent sources referenced in the text. Multivariate extremes are not treated. This allows us to present material spread over hundreds of pages in specialist texts in twenty pages. Chapter 5 develops new material on heavy tail diagnostics and gives more mathematical detail. Since variances and covariances may not exist for heavy tailed joint distributions, Chapter 6 reviews dependence concepts for certain classes of heavy tailed joint distributions, with a view to regressing heavy tailed variabl...

Overview by Pioneer observations of the distant geomagnetic tail

Energy Technology Data Exchange (ETDEWEB)

Villante, U [L' Aquila Univ. (Italy). Istituto de Astrofisica

1977-03-01

Pioneer 7 and Pioneer 8 spacecraft provided the only direct observations of the geomagnetic tail at geocentric distances as large as 1000 Rsub(e) and 500 Rsub(e) respectively. The presence of a low density plasma flow in the region of expected tail and the intermittent and short duration character of the tail encounters suggested in the past a distant tail structure remarkably different from its near-earth and cislunar shape. However the recent discovery of the plasma mantle allows interpretation of the Pioneer observations in terms of a distant tail that possibly is still preserving most of its near-earth characteristics. In particular, the region of tail encounters and the magnitude and direction of the observed magnetic field might be consistent with a cylindrical tail with a modestly increased cross-section. Neutral sheet observations also appear to be consistent with the most recent bidimensional tail models. Finally, as in the cislunar region, the double peaked proton energy spectra can be interpreted in terms of a partial intermingling of plasma sheet and plasma mantle populations.

Vertical Tail Buffeting Alleviation Using Piezoelectric Actuators-Some Results of the Actively Controlled Response of Buffet-Affected Tails (ACROBAT) Program

Science.gov (United States)

Moses, Robert W.

1997-01-01

Buffet is an aeroelastic phenomenon associated with high performance aircraft especially those with twin vertical tails. In particular, for the F/A-18 aircraft at high angles of attack, vortices emanating from wing/fuselage leading edge extensions burst, immersing the vertical tails in their wake. The resulting buffet loads on the vertical tails are a concern from fatigue and inspection points of view. Recently, a 1/6-scale F-18 wind-tunnel model was tested in the Transonic Dynamics Tunnel at the NASA Langley Research Center as part of the Actively Controlled Response Of Buffet Affected Tails (ACROBAT) Program to assess the use of active controls in reducing vertical tail buffeting. The starboard vertical tail was equipped with an active rudder and the port vertical tail was equipped with piezoelectric actuators. The tunnel conditions were atmospheric air at Mach 0.10. By using single-input-single-output control laws at gains well below the physical limits of the actuators, the power spectral density of the root strains at the frequency of the first bending mode of the vertical tail was reduced by as much as 60 percent up to angles of attack of 37 degrees. Root mean square (RMS) values of root strain were reduced by as much as 19 percent. The results herein illustrate that buffet alleviation of vertical tails can be accomplished using simple active control of the rudder or piezoelectric actuators. In fact, as demonstrated herein, a fixed gain single input single output control law that commands piezoelectric actuators may be active throughout the high angle-of-attack maneuver without requiring any changes during the maneuver. Future tests are mentioned for accentuating the international interest in this area of research.

UTAP, U Tailings Assessment Program

International Nuclear Information System (INIS)

Holmes, Ron

1998-01-01

1 - Description of program or function: UTAP carries out probabilistic analyses of the behaviour and environmental effects of uranium mill tailings, following close-out of milling operations. The models have been designed to allow predictions to be made for distances up to 50 kilometers in all directions from the tailings area. The models include features which include the ability to incorporate different receptors and site characteristics and to deal with input parameters which vary with time. 2 - Method of solution: UTAP is composed of a number of modules. These may be classified as either component or control modules. Component modules (or models) are the programs directly concerned with the simulation of a uranium tailings physical system; that is the computer implementation of the mathematical models representing the uranium tailings pile and surrounding environment. Control modules provide the infrastructure for probabilistic analysis using the component modules. These functions include probabilistic sampling of input parameters such as constant, normal, log-normal, uniform, log-uniform, triangular, Weibull, Beta, arbitrary and correlated. The sampling method used is straight Monte Carlo. The radionuclides modelled are: natural uranium, total thorium, radium-226, radon-222 and lead-210. The pH of the reference uranium tailings site and a chained river-lake system are also modelled. For the afore- mentioned radionuclides the following pathways of dose to the receptors modelled: water consumption, fish consumption, radon inhalation, dust inhalation, vegetable consumption, animal produce consumption and ground-shine. 3 - Restrictions on the complexity of the problem: The maximum number of steps through time allowed is 300

Unique structural features facilitate lizard tail autotomy.

Directory of Open Access Journals (Sweden)

Kristian W Sanggaard

Full Text Available Autotomy refers to the voluntary shedding of a body part; a renowned example is tail loss among lizards as a response to attempted predation. Although many aspects of lizard tail autotomy have been studied, the detailed morphology and mechanism remains unclear. In the present study, we showed that tail shedding by the Tokay gecko (Gekko gecko and the associated extracellular matrix (ECM rupture were independent of proteolysis. Instead, lizard caudal autotomy relied on biological adhesion facilitated by surface microstructures. Results based on bio-imaging techniques demonstrated that the tail of Gekko gecko was pre-severed at distinct sites and that its structural integrity depended on the adhesion between these segments.

The growth hormone/insulin-like growth factor-I axis hormones and bone markers in elite athletes in response to a maximum exercise test

DEFF Research Database (Denmark)

Ehrnborg, C.; Lange, K.H.; Dall, R.

2003-01-01

-53 yr) from Denmark, the United Kingdom, Italy, and Sweden participated in the study. The serum concentrations of total GH, GH22 kDa, IGF-I, IGF binding protein (IGFBP)-2, IGFBP-3, acid-labile subunit, procollagen type III (P-III-P), and the bone markers osteocalcin, carboxy-terminal cross......-linked telopeptide of type I collagen (ICTP), and carboxy-terminal propeptide of type I procollagen were measured. The maximum exercise test showed, in both genders, a peak concentration of total GH (P ... in both genders, with a peak value in the direct post-exercise phase and a subsequent decrease to baseline levels or below within 120 min. The osteocalcin and propeptide of type I procollagen values did not change during the exercise test. Specific reference ranges for each variable in the GH/IGF-I axis...

Ecological restoration alters microbial communities in mine tailings profiles.

Science.gov (United States)

Li, Yang; Jia, Zhongjun; Sun, Qingye; Zhan, Jing; Yang, Yang; Wang, Dan

2016-04-29

Ecological restoration of mine tailings have impact on soil physiochemical properties and microbial communities. The surface soil has been a primary concern in the past decades, however it remains poorly understood about the adaptive response of microbial communities along the profile during ecological restoration of the tailings. In this study, microbial communities along a 60-cm profile were investigated in a mine tailing pond during ecological restoration of the bare waste tailings (BW) with two vegetated soils of Imperata cylindrica (IC) and Chrysopogon zizanioides (CZ) plants. Revegetation of both IC and CZ could retard soil degradation of mine tailing by stimulation of soil pH at 0-30 cm soils and altered the bacterial communities at 0-20 cm depths of the mine tailings. Significant differences existed in the relative abundance of the phyla Alphaproteobacteria, Deltaproteobacteria, Acidobacteria, Firmicutes and Nitrospira. Slight difference of bacterial communities were found at 30-60 cm depths of mine tailings. Abundance and activity analysis of nifH genes also explained the elevated soil nitrogen contents at the surface 0-20 cm of the vegetated soils. These results suggest that microbial succession occurred primarily at surface tailings and vegetation of pioneering plants might have promoted ecological restoration of mine tailings.

Ecological restoration alters microbial communities in mine tailings profiles

Science.gov (United States)

Li, Yang; Jia, Zhongjun; Sun, Qingye; Zhan, Jing; Yang, Yang; Wang, Dan

2016-04-01

Ecological restoration of mine tailings have impact on soil physiochemical properties and microbial communities. The surface soil has been a primary concern in the past decades, however it remains poorly understood about the adaptive response of microbial communities along the profile during ecological restoration of the tailings. In this study, microbial communities along a 60-cm profile were investigated in a mine tailing pond during ecological restoration of the bare waste tailings (BW) with two vegetated soils of Imperata cylindrica (IC) and Chrysopogon zizanioides (CZ) plants. Revegetation of both IC and CZ could retard soil degradation of mine tailing by stimulation of soil pH at 0-30 cm soils and altered the bacterial communities at 0-20 cm depths of the mine tailings. Significant differences existed in the relative abundance of the phyla Alphaproteobacteria, Deltaproteobacteria, Acidobacteria, Firmicutes and Nitrospira. Slight difference of bacterial communities were found at 30-60 cm depths of mine tailings. Abundance and activity analysis of nifH genes also explained the elevated soil nitrogen contents at the surface 0-20 cm of the vegetated soils. These results suggest that microbial succession occurred primarily at surface tailings and vegetation of pioneering plants might have promoted ecological restoration of mine tailings.

Synthesis and characterization of novel fluoroalkyl-terminated hyperbranched polyurethane latex

Science.gov (United States)

Xu, Wei; Zhao, Weijia; Hao, Lifen; Wang, Sha; Pei, Mengmeng; Wang, Xuechuan

2018-04-01

Waterborne polyurethane (PU) emulsions are widely used in various fields and the demand for them is ever-increasing over the years. However, the hydrophilic chain extender inevitably bonded into the PU backbone can affect the water tolerance of PU. Thus, it is of great importance to improve PU water resistance effectively. Herein, novel fluoroalkyl-terminated hyperbranched polyurethane (HBPUF) latex was accordingly synthesized by graft reaction of perfluorohexyl ethyl alcohol and hyperbranched polyurethane (HBPU), which was previously obtained from interaction between hydroxyl-terminated hyperbranched polymer and PU prepolymer manufactured via the acetone process, as well as using neutralization, adding water, and high-speed stirring operations. We characterized the resultants and investigated its surface properties by IR, NMR, TEM, XRD, TGA, DSC, FE-SEM, AFM, XPS, and contact angle measurements, etc. IR and NMR tests confirmed that the fluorinated fragments had been grafted onto the tail end of HBPU. TEM, XRD, DSC, and FE-SEM results all accounted for the fact that there were multi-crystals in PU, HBPU and HBPUF. TGA results showed that thermal stabilities of the PU, HBPU, and HBPUF latex films were enhanced in turn. XPS and AFM analyses demonstrated that the fluorine-containing segments from the HBPUF terminals were prone to migrate and enrich on the film-air surface of the HBPUF latex film, which made water contact angle and water absorption of the HBPUF film be as 113.9° and 11.1%, respectively, compared to those of the PU film (77.8° and 136.2%). This research indicates that water resistance of the PU film can be efficiently enhanced by fluorinated polyurethane with novel fluoroalkyl-terminated hyperbranched structure.

A proactive approach to sustainable management of mine tailings

Science.gov (United States)

Edraki, Mansour; Baumgartl, Thomas

2015-04-01

The reactive strategies to manage mine tailings i.e. containment of slurries of tailings in tailings storage facilities (TSF's) and remediation of tailings solids or tailings seepage water after the decommissioning of those facilities, can be technically inefficient to eliminate environmental risks (e.g. prevent dispersion of contaminants and catastrophic dam wall failures), pose a long term economic burden for companies, governments and society after mine closure, and often fail to meet community expectations. Most preventive environmental management practices promote proactive integrated approaches to waste management whereby the source of environmental issues are identified to help make a more informed decisions. They often use life cycle assessment to find the "hot spots" of environmental burdens. This kind of approach is often based on generic data and has rarely been used for tailings. Besides, life cycle assessments are less useful for designing operations or simulating changes in the process and consequent environmental outcomes. It is evident that an integrated approach for tailings research linked to better processing options is needed. A literature review revealed that there are only few examples of integrated approaches. The aim of this project is to develop new tailings management models by streamlining orebody characterization, process optimization and rehabilitation. The approach is based on continuous fingerprinting of geochemical processes from orebody to tailings storage facility, and benchmark the success of such proactive initiatives by evidence of no impacts and no future projected impacts on receiving environments. We present an approach for developing such a framework and preliminary results from a case study where combined grinding and flotation models developed using geometallurgical data from the orebody were constructed to predict the properties of tailings produced under various processing scenarios. The modelling scenarios based on the

Solution Structure and Membrane Interaction of the Cytoplasmic Tail of HIV-1 gp41 Protein.

Science.gov (United States)

Murphy, R Elliot; Samal, Alexandra B; Vlach, Jiri; Saad, Jamil S

2017-11-07

The cytoplasmic tail of gp41 (gp41CT) remains the last HIV-1 domain with an unknown structure. It plays important roles in HIV-1 replication such as mediating envelope (Env) intracellular trafficking and incorporation into assembling virions, mechanisms of which are poorly understood. Here, we present the solution structure of gp41CT in a micellar environment and characterize its interaction with the membrane. We show that the N-terminal 45 residues are unstructured and not associated with the membrane. However, the C-terminal 105 residues form three membrane-bound amphipathic α helices with distinctive structural features such as variable degree of membrane penetration, hydrophobic and basic surfaces, clusters of aromatic residues, and a network of cation-π interactions. This work fills a major gap by providing the structure of the last segment of HIV-1 Env, which will provide insights into the mechanisms of Gag-mediated Env incorporation as well as the overall Env mobility and conformation on the virion surface. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of tail docking and docking length on neuroanatomical changes in healed tail tips of pigs

DEFF Research Database (Denmark)

Herskin, M S; Thodberg, K; Jensen, Henrik Elvang

2015-01-01

% (n=19); or leaving 25% (n=11) of the tail length on the pigs. The piglets were docked between day 2 and 4 after birth using a gas-heated apparatus, and were kept under conventional conditions until slaughter at 22 weeks of age, where tails were removed and examined macroscopically and histologically...

Oil sands tailings technology : understanding the impact to reclamation

Energy Technology Data Exchange (ETDEWEB)

Mamer, M. [Suncor Energy Inc., Fort McMurray, AB (Canada)

2010-07-01

This paper discussed tailings management techniques at oil sands mines and their effects on reclamation schedules and outcomes. The layer of mature fine tailings (MFT) that forms in tailings ponds does not settle within a reasonable time frame, requiring more and larger tailings ponds for storing MFT. Consolidated tailings (CT) technology was developed to accelerate the consolidation of MFT, although the process nonetheless takes decades. CT is produced from mixing tailings sand, gypsum, and MFT to create a mixture that will consolidate more quickly and release water. However, CT production is tied to the extraction process, making it applicable only when the plant is operational, and a precise recipe and accurate injection are required for CT to work. In tailings reduction operations (TRO), a new approach to tailings management, MFT is mixed with a polymer flocculant, deposited in thin layers, and allowed to dry. TRO has a significant advantage over CT in that the latter takes up to 30 years to consolidate to a trafficable surface compared to weeks for TRO. TRO allows MFT to be consumed more quickly than it is produced, reducing need to build more tailings ponds, operates independent of plant operations, accelerates the reclamation time frame, and offers enhanced flexibility in final tailings placement sites. TRO also creates a dry landscape, to which well established reclamation techniques can be applied. Dried MFT is a new material type, and research is exploring optimum reclamation techniques. 2 figs.

Reclamation of copper mine tailings using sewage sludge

OpenAIRE

Stjernman Forsberg, Lovisa

2008-01-01

Tailings are the fine-grained fraction of waste produced during mining operations. This work was carried out on tailings from the Aitik copper mine in northern Sweden. Establishment of vegetation on the Aitik mine tailings deposit is planned to take place at closure of the mine, using sewage sludge as fertiliser. However, the tailings contain traces of metal sulphides, e.g. pyrite, FeS2, and chalcopyrite, CuFeS2. When the sulphides are oxidised, they start to weather and release metals and st...

Processes for extracting radium from uranium mill tailings

International Nuclear Information System (INIS)

Nirdosh, I.; Baird, M.H.; Muthuswami, S.V.

1987-01-01

This patent describes a process for the extraction of radium from uranium mill tailings solids including the steps of contacting the tailings with a liquid leaching agent, leaching the tailings therewith and subsequently separating the leachate liquid and the leached solids. The improvement described here is wherein the leaching agent comprises: (a) a complexing agent in an amount of from 2 to 10 times the stoichiometric amount needed to complex the metal ions to be removed thereby from the tailings; and (b) a reducing agent reducing the hydrolysable ions of the metal ions to be removed to their lower oxidation states, the reduction agent being present in an amount from 2 to 10 times the stoichiometric amount needed for reducing the hydrolysable metals present in the tailings

APPLICATION OF POSTFLOTATION TAILINGS IN HYDROENGINEERING STRUCTURES

Directory of Open Access Journals (Sweden)

Katarzyna Stefaniak

2017-01-01

Full Text Available Economic development stimulated by the increased demand for production of consumer goods and the growing human population result in increasing amounts of various wastes, including tailings. The mining industry in Poland, comprising also mining of non-ferrous metal ores, is a strategic branch of the national economy and at the same time a leading waste producer. Tailings management is a significant problem both in Poland and worldwide. Frequently considerable amounts of wastes are accumulated in mine spoil tips, in areas not always suitable for their deposition, thus leading to the degradation of the surrounding environment. At the huge volume of produced wastes their rational and economically viable management is becoming crucial. On the other hand, depletion of natural aggregate deposits is an important incentive to search for substitutes, which would be suitable for the development of road infrastructure or which could be used in earth structure engineering to construct hydroengineering objects. Since no profitable recovery technologies are available at present, tailings generated by copper mining are deposited in tailings storage facilities. The largest and at the same time the only currently operating facility in Poland is the Żelazny Most Mining Tailings Storage Facility, belonging to KGHM Polska Miedź S.A. The paper presents criteria for material quality and density imposed on the material embedded in the static core of the tailings pond dam. For this purpose studies were conducted to confirm applicability of sorted tailings as a material for the construction of earth structures.

Protein complexes associated with the Kaposi's sarcoma-associated herpesvirus-encoded LANA

International Nuclear Information System (INIS)

Kaul, Rajeev; Verma, Subhash C.; Robertson, Erle S.

2007-01-01

Kaposi's sarcoma-associated herpesvirus (KSHV) is the major biological cofactor contributing to development of Kaposi's sarcoma. KSHV establishes a latent infection in human B cells expressing the latency-associated nuclear antigen (LANA), a critical factor in the regulation of viral latency. LANA is known to modulate viral and cellular gene expression. We report here on some initial proteomic studies to identify cellular proteins associated with the amino and carboxy-terminal domains of LANA. The results of these studies show an association of known cellular proteins which support LANA functions and have identified additional LANA-associated proteins. These results provide new evidence for complexes involving LANA with a number of previously unreported functional classes of proteins including DNA polymerase, RNA helicase and cell cycle control proteins. The results also indicate that the amino terminus of LANA can interact with its carboxy-terminal domain. This interaction is potentially important for facilitating associations with other cell cycle regulatory proteins which include CENP-F identified in association with both the amino and carboxy-termini. These novel associations add to the diversity of LANA functions in relation to the maintenance of latency and subsequent transformation of KSHV infected cells

Fat-tailed risk about climate change and climate policy

International Nuclear Information System (INIS)

Hwang, In Chang; Tol, Richard S.J.; Hofkes, Marjan W.

2016-01-01

This paper investigates the role of emissions control in welfare maximization under fat-tailed risk about climate change. We provide a classification of fat tails and discuss the effect of fat-tailed risk on climate policy. One of the main findings is that emissions control may prevent the “strong” tail-effect from arising, at least under some conditions such as bounded temperature increases, low risk aversion, low damage costs, and bounded utility function. More specifically, the fat-tailed risk with respect to a climate parameter does not necessarily lead to an unbounded carbon tax. In this case, the basic principle of cost-benefit analysis maintains its applicability. - Highlights: • A fat tail is classified and the tail effect on climate policy is discussed. • The optimal carbon tax is not necessarily unbounded. • The basic principle of cost-benefit analysis maintains its applicability. • This is a numerical confirmation of the recent theoretical research.

Impact of flocculation on flotation tailing's hydro-cycloning properties

Directory of Open Access Journals (Sweden)

Knežević Dinko N.

2014-01-01

Full Text Available Research results of hydro-cycloning of flocculated and non-flocculated flotation tailing from the lead and zinc open pit mine 'Suplja stijena', Sula - Montenegro have been shown in this paper. Reason for this research was finding conditions in order to separate fraction that is suitable for embankment erection. Flotation tailings has been tested in the very state that it goes out from the flotation process and tailings which is flocculated by anionic flocculant. The object was to determine the impact of flocculation on properties of hydro-cycloning products and disposal process. In hydro-cycloning process greater underflow mass is being separated with non-flocculated tailing. Values of geomechanical parameters are significantly different, especially hydro-cyclone's underflow. All geomechanical parameters of hydro-cyclone's underflow are suitable for erecting embankment which shall be made from non-flocculated tailing. Underflow drainage of non-flocculated tailing is faster while overflow drainage is slower and problematic with both tailings.

Long-term ecological behaviour of abandoned uranium mill tailings. 1

International Nuclear Information System (INIS)

Kalin, M.

1983-03-01

Inactive uranium mill tailings were surveyed in the Province of Ontario to describe their surface characteristics, identify naturally invading biota, and determine essential chemical and physical parameters associated with the tailings. Inactive tailings sites can have wet areas, tailings completely covered with water, and dry areas. In the wet areas of most sites, wetland vegetation stands were found which were dominated by species of cattails (Typhaceae), along with some species of rushes (Juncaceae) and sedges (Cyperceae). Dry areas of the tailings exhibited a variety of surface features which are often a reflection of different amelioration efforts. Most of the indigenous species of vascular plants identified on dry areas of the tailings occurred only sporadically. Invading plants found on most sites were the tree species, trembling aspen (Populus tremuloides) and paper birch (Betula papyrifera). Elemental concentration and some physical characteristics of the tailings collected from a depth of 0-20 cm were determined. Uptake of heavy metals and radionuclides were evaluated in trees found in the dry areas and in cattails (Typha latifolia) in the wetland areas. Water bodies on tailings and surface water leaving the tailings, before and after treatment, were characterized in this survey. Aquatic bryophytes have invaded some water bodies on the tailings, and acid tolerant algae were evident in most of the water associated with the tailings. Ecological processes occurring on inactive uranium mill tailings which were identified in this survey are essential in evaluating the long-term fate of these waste sites

Leachability of radioactive constituents from uranium mine tailings

International Nuclear Information System (INIS)

Constable, T.W.

1987-04-01

A series of long-term studies were conducted both to examine the leachability of major constituents (acidity, TDS) and radioisotopes from uranium mining/milling tailings and settling pond sludges, and to assess the effect of two treatment methods (solidification and vegetation) on leachate characteristics. Four bench-scale experiments were conducted to examine the leachability of: 1) old tailings and those containing a large portion of (Ba,Ra)SO 4 sludges; 2) untreated and solidified (Ba,Ra)SO 4 sludges located at the bottom of settling ponds; 3) new tailings that had been vegetated or solidified; and 4) new tailings subject to varying flow rates. A fifth study was conducted to examine the microbiology of Experiments 2 and 3. In addition, the lysimeter solids remaining in the old tailings at the end of Experiment 1 were characterized through chemical and radionuclide analyses and Scanning Electron Microscope-X-ray Emission and Mossbauer Spectroscopy techniques. This report provides an extensive database of temporal variations in leachate characteristics under both normal and accelerated water application rates. It also presents hypotheses of possible leaching mechanisms in the wastes that could explain the observed data, and conceptual model of tailings leaching processes which integrates the results of all the tailings experiments

How We Tend To Overestimate Powerlaw Tail Exponents

OpenAIRE

Nassim N. Taleb

2012-01-01

In the presence of a layer of metaprobabilities (from uncertainty concerning the parameters), the asymptotic tail exponent corresponds to the lowest possible tail exponent regardless of its probability. The problem explains "Black Swan" effects, i.e., why measurements tend to chronically underestimate tail contributions, rather than merely deliver imprecise but unbiased estimates.

Electrodialytic remediation of copper mine tailings

DEFF Research Database (Denmark)

Hansen, Henrik K.; Rojo, A.; Ottpsen, Lisbeth M.

2005-01-01

electrodialytic remediation experiments on copper mine tailings. The results show that electric current could remove copper from watery tailing if the potential gradient was higher than 2V/cm during 21 days. With addition of sulphuric acid, the process was enhanced because the pH decreased to around 4...

Moth tails divert bat attack: evolution of acoustic deflection.

Science.gov (United States)

Barber, Jesse R; Leavell, Brian C; Keener, Adam L; Breinholt, Jesse W; Chadwell, Brad A; McClure, Christopher J W; Hill, Geena M; Kawahara, Akito Y

2015-03-03

Adaptations to divert the attacks of visually guided predators have evolved repeatedly in animals. Using high-speed infrared videography, we show that luna moths (Actias luna) generate an acoustic diversion with spinning hindwing tails to deflect echolocating bat attacks away from their body and toward these nonessential appendages. We pit luna moths against big brown bats (Eptesicus fuscus) and demonstrate a survival advantage of ∼ 47% for moths with tails versus those that had their tails removed. The benefit of hindwing tails is equivalent to the advantage conferred to moths by bat-detecting ears. Moth tails lured bat attacks to these wing regions during 55% of interactions between bats and intact luna moths. We analyzed flight kinematics of moths with and without hindwing tails and suggest that tails have a minimal role in flight performance. Using a robust phylogeny, we find that long spatulate tails have independently evolved four times in saturniid moths, further supporting the selective advantage of this anti-bat strategy. Diversionary tactics are perhaps more common than appreciated in predator-prey interactions. Our finding suggests that focusing on the sensory ecologies of key predators will reveal such countermeasures in prey.

Characterization and monitoring of transverse beam tails

International Nuclear Information System (INIS)

Seeman, J.T.; Decker, F.J.; Hsu, I.; Young, C.

1991-05-01

Low emittance electron beams accelerated to high energy in a linac experience transverse effects (wakefield, filamentation, optics) which produce non-Gaussian projected transverse beam distributions. Characterizations of the beam shapes are difficult because the shapes are asymmetric and change with betatron phase. In this note several methods to describe beam distributions are discussed including an accelerator physics model of these tails. The uses of these characterizations in monitoring the beam emittances in the SLC are described in this paper. First, two dimensional distributions from profile monitor screens are reviewed showing correlated tails. Second, a fitting technique for non-Gaussian one dimensional distributions is used to extract the core from the tail areas. Finally, a model for tail propagation in the linac is given. 3 refs., 6 figs

International experience in tailings pond remediation

Energy Technology Data Exchange (ETDEWEB)

MacG. Robertson, A. [Robertson GeoConsultants Ltd., Vancouver (Canada)

2001-07-01

Tailings pond remediation is required primarily on mine closure. While mining is an ancient industry, requirement for mine facility remediation is a comparatively new development. Requirement for remediation has come about partly as a result of mans awareness of the environmental impacts of mining and his desire to minimize this, partly, as a result of the ever-increasing scale and production rates of tailings generation and the resulting increased environmental impacts and safety risks. The paper starts with a review of the evolution of mans intolerance of environmental impacts from tailings production and the assignment of liability to remediate such impacts. Many of the tailings ponds currently undergoing remediation were designed and constructed using methods and technology that would be considered inappropriate for new impoundments being designed and developed today. The paper reviews the history of tailings impoundment design and construction practice and the resulting inherent deficiencies that must be remediated. Current practices and future trends in tailings pond remediation are reviewed. The evolution of regulatory requirements is not only in terms of technical and safety criteria, but also in terms of financial and political risk. Perhaps the most substantive driver of risk management is today the requirement for corporate governance at mining company board level and oversight of new project development in the underdeveloped countries by the large financial institutions responsible for funding projects. Embarrassment in the public eye and punishment in the stock markets for poor environmental and safety performance is driving the need for efficient and effective risk management of potential impacts and the remediation to avoid these. A basis for practical risk management is described. (orig.)

International experience in tailings pond remediation

International Nuclear Information System (INIS)

Robertson, A.MacG.

2001-01-01

Tailings pond remediation is required primarily on mine closure. While mining is an ancient industry, requirement for mine facility remediation is a comparatively new development. Requirement for remediation has come about partly as a result of mans awareness of the environmental impacts of mining and his desire to minimize this, partly, as a result of the ever-increasing scale and production rates of tailings generation and the resulting increased environmental impacts and safety risks. The paper starts with a review of the evolution of mans intolerance of environmental impacts from tailings production and the assignment of liability to remediate such impacts. Many of the tailings ponds currently undergoing remediation were designed and constructed using methods and technology that would be considered inappropriate for new impoundments being designed and developed today. The paper reviews the history of tailings impoundment design and construction practice and the resulting inherent deficiencies that must be remediated. Current practices and future trends in tailings pond remediation are reviewed. The evolution of regulatory requirements is not only in terms of technical and safety criteria, but also in terms of financial and political risk. Perhaps the most substantive driver of risk management is today the requirement for corporate governance at mining company board level and oversight of new project development in the underdeveloped countries by the large financial institutions responsible for funding projects. Embarrassment in the public eye and punishment in the stock markets for poor environmental and safety performance is driving the need for efficient and effective risk management of potential impacts and the remediation to avoid these. A basis for practical risk management is described. (orig.)

Flexible histone tails in a new mesoscopic oligonucleosome model.

Science.gov (United States)

Arya, Gaurav; Zhang, Qing; Schlick, Tamar

2006-07-01

We describe a new mesoscopic model of oligonucleosomes that incorporates flexible histone tails. The nucleosome cores are modeled using the discrete surface-charge optimization model, which treats the nucleosome as an electrostatic surface represented by hundreds of point charges; the linker DNAs are treated using a discrete elastic chain model; and the histone tails are modeled using a bead/chain hydrodynamic approach as chains of connected beads where each bead represents five protein residues. Appropriate charges and force fields are assigned to each histone chain so as to reproduce the electrostatic potential, structure, and dynamics of the corresponding atomistic histone tails at different salt conditions. The dynamics of resulting oligonucleosomes at different sizes and varying salt concentrations are simulated by Brownian dynamics with complete hydrodynamic interactions. The analyses demonstrate that the new mesoscopic model reproduces experimental results better than its predecessors, which modeled histone tails as rigid entities. In particular, our model with flexible histone tails: correctly accounts for salt-dependent conformational changes in the histone tails; yields the experimentally obtained values of histone-tail mediated core/core attraction energies; and considers the partial shielding of electrostatic repulsion between DNA linkers as a result of the spatial distribution of histone tails. These effects are crucial for regulating chromatin structure but are absent or improperly treated in models with rigid histone tails. The development of this model of oligonucleosomes thus opens new avenues for studying the role of histone tails and their variants in mediating gene expression through modulation of chromatin structure.

Assessment of the underground disposal of tailings

Energy Technology Data Exchange (ETDEWEB)

Hutt, N M [Morwijk Enterprises Ltd., (Canada); Morin, K A [Normar Enterprises, (Canada)

1995-06-01

The Atomic Energy Control Board (AECB) of Canada is facing the issue of long-term disposal of uranium tailings. One option that has not been examined in sufficient detail for the AECB is the retrieval of tailings from surface impoundments and subsequent placement of those tailings in underground workings of mines. This report is structured like a catalogue of facts and information, with each paragraph presenting some concept, concern, theory, or case study involving the retrieval or placement of tailings. All relevant information, findings, interpretations, conclusions, and recommendations gathered during the course of this study are included. The Table of Contents illustrates the striking number of relevant topics and acts like a flowchart or checklist to ensure that an underground-disposal submission by a mining company has addressed relevant topics. This report explains in detail the implications of disturbing surface-impounded tailings for the purpose of placing only some of the volume underground. The cumulative environmental, safety, and monetary liabilities of such a partial scheme can be discouraging in some cases. (author). 244 refs., 47 tabs., 17 figs.

Assessment of the underground disposal of tailings

International Nuclear Information System (INIS)

Hutt, N.M.; Morin, K.A.

1995-06-01

The Atomic Energy Control Board (AECB) of Canada is facing the issue of long-term disposal of uranium tailings. One option that has not been examined in sufficient detail for the AECB is the retrieval of tailings from surface impoundments and subsequent placement of those tailings in underground workings of mines. This report is structured like a catalogue of facts and information, with each paragraph presenting some concept, concern, theory, or case study involving the retrieval or placement of tailings. All relevant information, findings, interpretations, conclusions, and recommendations gathered during the course of this study are included. The Table of Contents illustrates the striking number of relevant topics and acts like a flowchart or checklist to ensure that an underground-disposal submission by a mining company has addressed relevant topics. This report explains in detail the implications of disturbing surface-impounded tailings for the purpose of placing only some of the volume underground. The cumulative environmental, safety, and monetary liabilities of such a partial scheme can be discouraging in some cases. (author). 244 refs., 47 tabs., 17 figs

Geochemical Characterization of Copper Tailings after Legume Revegetation

Directory of Open Access Journals (Sweden)

Justine Perry T. Domingo

2014-12-01

Full Text Available Knowledge on the geochemistry of mine tailings is important in understanding the challenges in establishing vegetation cover on tailings dumps and mined out areas. In this study, the mineralogy and trace element composition of copper tailings were examined. Two legume species, Calopogonium mucunoides and Centrosema molle, were utilized to investigate the possible effects of these plants in the geochemical development of mine tailings into soil-like material. The initial mineralogical and chemical analysis of the tailings samples indicated poor conditions for plant growth—minimal levels of major nutrients and organic matter as well as elevated copper concentrations. Despite these conditions, the two legume species exhibited good growth rates. Both legumes have likewise signif icantly reduced heavy metal concentrations in the tailings, indicating the possibility of metal hyperaccumulation in the plant tissue. The mineral composition has been retained even after revegetation; nevertheless, breakdown of primary minerals and subsequent formation of clay minerals were detected. These results provide insights on the transformation of toxic materials into habitable substrates for sustained plant growth.

Grouting of uranium mill tailings piles

International Nuclear Information System (INIS)

Boegly, W.J. Jr.; Tamura, T.; Williams, J.D.

1984-03-01

A program of remedial action was initiated for a number of inactive uranium mill tailings piles. These piles result from mining and processing of uranium ores to meet the nation's defense and nuclear power needs and represent a potential hazard to health and the environment. Possible remedial actions include the application of covers to reduce radon emissions and airborne transport of the tailings, liners to prevent groundwater contamination by leachates from the piles, physical or chemical stabilization of the tailings, or moving the piles to remote locations. Conventional installation of liners would require excavation of the piles to emplace the liner; however, utilization of grouting techniques, such as those used in civil engineering to stabilize soils, might be a potential method of producing a liner without excavation. Laboratory studies on groutability of uranium mill tailings were conducted using samples from three abandoned piles and employing a number of particulate and chemical grouts. These studies indicate that it is possible to alter the permeability of the tailings from ambient values of 10 -3 cm/s to values approaching 10 -7 cm/s using silicate grouts and to 10 -8 cm/s using acrylamide and acrylate grouts. An evaluation of grouting techniques, equipment required, and costs associated with grouting were also conducted and are presented. 10 references, 1 table

Sirenomelia apus with vestigial tail.

Science.gov (United States)

Parikh, Tushar B; Nanavati, Ruchi N; Udani, Rekha H

2005-04-01

Sirenomelia is an exceptionally rare congenital malformation characterized by complete or near complete fusion of lower limbs. A newborn with clinical features of sirenomelia including fused lower limbs in medial position, absent fibula, anal atresia, complete absence of urogenital system (bilateral renal agenesis, absent ureters, urinary bladder, absent internal and external genitalia), a single umbilical artery and a vestigial tail is reported. Association of vestigial tail with sirenomelia is not described in the literature.

Research on the characterization and conditioning of uranium mill tailings. III. Summary of uranium mill tailings conditioning research and implications regarding remedial actions

International Nuclear Information System (INIS)

Dreesen, D.R.; Cokal, E.J.; Thode, E.F.; Williams, J.M.

1983-06-01

This report summarizes the findings of research on uranium mill tailings conditioning technology development performed for the Department of Energy's (DOE) Uranium Mill Tailings Remedial Action Project (UMTRAP). Hazards and risks posed by tailings piles are discussed in relation to the goal of conditioning the tailings to reduce these hazards. The results of our efforts regarding characterization of tailings, removal of radionuclides, mineral recovery, thermal stabilization, and engineering/economic analysis of conditioning are presented. The implications of these results for remedial action plans are discussed and conclusions regarding the applicability of these technologies are also presented

BIOMECHANICS. Why the seahorse tail is square.

Science.gov (United States)

Porter, Michael M; Adriaens, Dominique; Hatton, Ross L; Meyers, Marc A; McKittrick, Joanna

2015-07-03

Whereas the predominant shapes of most animal tails are cylindrical, seahorse tails are square prisms. Seahorses use their tails as flexible grasping appendages, in spite of a rigid bony armor that fully encases their bodies. We explore the mechanics of two three-dimensional-printed models that mimic either the natural (square prism) or hypothetical (cylindrical) architecture of a seahorse tail to uncover whether or not the square geometry provides any functional advantages. Our results show that the square prism is more resilient when crushed and provides a mechanism for preserving articulatory organization upon extensive bending and twisting, as compared with its cylindrical counterpart. Thus, the square architecture is better than the circular one in the context of two integrated functions: grasping ability and crushing resistance. Copyright © 2015, American Association for the Advancement of Science.

Micropore Structure of Cement-Stabilized Gold Mine Tailings

Directory of Open Access Journals (Sweden)

Joon Kyu Lee

2018-03-01

Full Text Available Mine tailings have often to be stabilized by mixing them with cementing agents. In this study, the pore structure of gold tailings stabilized with Portland cement was evaluated by means of mercury intrusion porosimetry. The investigation was conducted on samples prepared with different fractions of tailings and cement as well as on samples activated with elevated temperature curing and chemical (CaCl2 addition. It was observed that all mixed samples exhibit a mono-modal pore size distribution, indicating that the cement-stabilized tailings are characterized by a single-porosity structure. The results also showed that the higher fraction of tailings and cement leads to a dense and finer pore structure. The total porosity of mixture samples decreases with increasing curing temperature and CaCl2 concentration due to the acceleration of hydration reaction.

Dewatering Behaviour of Fine Oil Sands Tailings : An Experimental Study

NARCIS (Netherlands)

Yao, Y.

2016-01-01

Oil sands tailings are a warm aqueous suspension of sand, silt, clay, residual bitumen and naphtha. The tailings are hydraulically transported and stored in tailing ponds where they segregate, with the sand settling from suspension forming beaches and the remaining tailings flowing to the middle of

A Glimpse of the genomic diversity of haloarchaeal tailed viruses

Directory of Open Access Journals (Sweden)

Ana eSencilo

2014-03-01

Full Text Available Tailed viruses are the most common isolates infecting prokaryotic hosts residing hypersaline environments. Archaeal tailed viruses represent only a small portion of all characterized tailed viruses of prokaryotes. But even this small dataset revealed that archaeal tailed viruses have many similarities to their counterparts infecting bacteria, the bacteriophages. Shared functional homologues and similar genome organizations suggested that all microbial tailed viruses have common virion architectural and assembly principles. Recent structural studies have provided evidence justifying this thereby grouping archaeal and bacterial tailed viruses into a single lineage. Currently there are 17 haloarchaeal tailed viruses with entirely sequenced genomes. Nine viruses have at least one close relative among the 17 viruses and, according to the similarities, can be divided into three groups. Two other viruses share some homologues and therefore are distantly related, whereas the rest of the viruses are rather divergent (or singletons. Comparative genomics analysis of these viruses offers a glimpse into the genetic diversity and structure of haloarchaeal tailed virus communities.

Structural Conservation of the Myoviridae Phage Tail Sheath Protein Fold

Energy Technology Data Exchange (ETDEWEB)

Aksyuk, Anastasia A.; Kurochkina, Lidia P.; Fokine, Andrei; Forouhar, Farhad; Mesyanzhinov, Vadim V.; Tong, Liang; Rossmann, Michael G. (SOIBC); (Purdue); (Columbia)

2012-02-21

Bacteriophage phiKZ is a giant phage that infects Pseudomonas aeruginosa, a human pathogen. The phiKZ virion consists of a 1450 {angstrom} diameter icosahedral head and a 2000 {angstrom}-long contractile tail. The structure of the whole virus was previously reported, showing that its tail organization in the extended state is similar to the well-studied Myovirus bacteriophage T4 tail. The crystal structure of a tail sheath protein fragment of phiKZ was determined to 2.4 {angstrom} resolution. Furthermore, crystal structures of two prophage tail sheath proteins were determined to 1.9 and 3.3 {angstrom} resolution. Despite low sequence identity between these proteins, all of these structures have a similar fold. The crystal structure of the phiKZ tail sheath protein has been fitted into cryo-electron-microscopy reconstructions of the extended tail sheath and of a polysheath. The structural rearrangement of the phiKZ tail sheath contraction was found to be similar to that of phage T4.

Polymer aids for settling and filtration of oil sands tailings

Energy Technology Data Exchange (ETDEWEB)

Wang, X. [Alberta Univ., Edmonton, AB (Canada). Dept. of Chemical and Materials Engineering; Energy Resources Conservation Board, Calgary, AB (Canada). Oil Sands Section; Xu, Z.; Masliyah, J.H. [Alberta Univ., Edmonton, AB (Canada). Dept. of Chemical and Materials Engineering

2008-07-01

Oil sand tailings are segregated into coarse and fine tailings. High volumes of toxic fluids and tailings are created in the process. Tailings ponds are an environmental risk with high operating and maintenance costs. Current commercial technologies uses chemical additions to create recycled water and composite tailings (CT). Researchers are now investigating centrifuged and dry mature fine tailings (MFT). Filtration processes with flocculants are used to separate the tailings into warm recycle water and dried cakes that can be used in reclamation processes. Studies are being conducted to find a polymer than can effectively flocculate and filter whole oil sands tailings. The filtration procedure uses pressure to produce released water. Polymers include magnafloc and Al-PAM polymer concentrations are used in slurry masses. Tests have been conducted to determine the settling rates of the polymers. The tests showed that Al-PAM filtered the tailings effectively. Paraffinic froth treatment tests have also been conducted to determine settling rates. A cake produced with froth treatment tailings of Al-PAM 400 ppm had a water content 42.5 wt per cent. The tests showed that while Magnafloc 1011 is a good settling aid, but a poor filtration addition. Al-PAM aided in both the flocculation and filtration processes. Higher Al-PAM dosages are needed for froth treatment tailings processes. It was concluded that dry cakes are produced with the addition of Al-PAM. tabs., figs.

The problem of abandoned uranium tailings in northern Saskatchewan

International Nuclear Information System (INIS)

Swanson, S.; Abouguendia, Z.

1981-11-01

Two Saskatchewan tailings sites, Lorado and Gunnar, covering approximately 89 ha., were abandoned in the early 1960s leaving untreated tailings in lakes and depressions. This report reviews the literature on environmental conditions in abandoned uranium tailings and available managmenet and mitigation options, and identifies research requirements essential for proper treatment of these two sites. The recommended management plan includes isolation of the exposed tailings area from surface waters, stabilization of the exposed tailings surfaces, diversion of runoff around tailings, treatment of overflow water before release, and implementation of an environmental monitoring program. Revegetation appears to be a promising stabilization measure, but research is needed into propagation methods of appropriate native species. Studies of the existing geological and hydrological conditions at both sites, detailed characterization of the wastes, field testing of different surface treatment methods, and nutrient cycling investigations are also needed

Asymmetric Extreme Tails and Prospective Utility of Momentum Returns

NARCIS (Netherlands)

Stork, P.A.; Gregory-Allen, R.; Lu, H.

2012-01-01

We use extreme value theory to analyse the tails of a momentum strategy's return distribution. The asymmetry between the fat left tail and thin right tail strongly reduces a momentum strategy's prospective utility levels. © 2012 Elsevier B.V.

Measurement of radon flux and tailings parameters for quantifying the source term due to radon exhalation from U tailings pile at Jaduguda

International Nuclear Information System (INIS)

Sahoo, B.K.; Mayya, Y.S.; Sapra, B.K.; Gaware, J.J.; Khuswaha, H.S.

2010-01-01

Full text: The exposures from radon ( 222 Rn) and its decay products have been received considerable attention in the world community because of their adverse health effect. There are various natural and man-made sources of radon present in our environment. Among the man-made sources, the U tailings (waste product from U mining and milling facility) may be considered an important one because it contains significant amount of 226 Ra activity after the U extraction from the ore bodies. These tailings (slurry form) are being impounded into a repository site nearby the facility called 'Tailings Pile' (TP). Significant amount of radon emission takes place from this area by the process of emanation and exhalation. Hence, a study was taken up to quantify the source term arising due to radon emission from uranium tailings pile at Jaduguda in Jharkhand state. In-situ experiments were conducted at 40 locations of the uranium tailings pile in three seasons namely summer, rainy and winter to measure the radon fluxes. The measurements were carried out by deploying a cylindrical chamber, attached to a continuous radon monitor, on the surface of the tailings pile. The dimension of the chamber was selected by using a recently developed two dimensional theory of soil chamber, so that radon concentration growth will be in exponential fashion and the data generated within 2-3 hours of deployment period will be sufficient for accurately deriving the actual radon flux. After the data collection, the fluxes were derived by fitting an exponential growth function to the plot of radon concentration with time. The fluxes were also predicted by diffusion theory using the measured tailings parameters such as 226 Ra content, radon emanation factor, porosity, temperature and moisture. An excellent matching between the predicted and measured fluxes was observed. The validity of diffusion theory in the matrix of U tailings pile provides an alternate method for back-calculating the tailings

Limits theorems for tail processes with applications tointermediate quantile estimation

NARCIS (Netherlands)

Einmahl, J.H.J.

1992-01-01

A description of the weak and strong limiting behaviour of weighted uniform tail empirical and tail quantile processes is given. The results for the tail quantile process are applied to obtain weak and strong functional limit theorems for a weighted non-uniform tail-quantile-type process based on a

Rigid-rod polyamides and polyimides derived from 4,3 ''-diamino-2 ',6 '-diphenyl- or di(4-biphenylyl)-p-terphenyl and 4-amino-4 ''-carboxy-2 ',6 '-diphenyl-p-terphenyl

NARCIS (Netherlands)

Spiliopoulos, IK; Mikroyannidis, JA; Tsivgoulis, GM

1998-01-01

4,3 "-Diamino-2',6'-diphenyl- or di(4-biphenylyl)p-terphenyl (3a or 3b) and 4-amino-4 "-carboxy-2',6'-diphenyl-p-terphenyl (6) were synthesized through pyrylium salts and used for the preparation of rigid-rod polyamides and polyimides. The polymers were characterized by inherent viscosity, elemental

Functional morphology of the aardvark tail.

Science.gov (United States)

Endo, H; Mori, K; Koyabu, D; Kawada, S; Komiya, T; Itou, T; Koie, H; Kitagawa, M; Sakai, T

2013-04-01

The musculoskeletal system of the aardvark (Orycteropus afer) tail was morphologically examined in two adult specimens. The tail musculature comprised three muscular groups, viz. a dorsal sacrocaudal system that consisted of the irregularly oriented Musculus sacrocaudalis dorsalis medialis and M. sacrocaudalis dorsalis lateralis, a lateral inter-vertebral connecting system, and a ventral sacrocaudal system characterized by the thick M. sacrocaudalis ventralis lateralis and M. sacrocaudalis ventralis medialis. Both the dorsal and ventral systems possessed large tendon groups that strengthened the tail structure. Computed tomography (CT) examination showed the presence of large but homogeneous cartilaginous inter-vertebral discs, whereas V-shaped bones were situated at the ventral aspect of the caudal vertebrae at the level of the inter-vertebral discs. CT visualization of the tendons and V-shaped bones in various tail positions suggested that these structures contribute to the tunnel digging action by bearing the trunk weight and lending force when the aardvark are displacing the soil by means of the forelimbs. © 2012 Blackwell Verlag GmbH.

Experiments on a Tail-wheel Shimmy

Science.gov (United States)

Harling, R; Dietz, O

1954-01-01

Model tests on the "running belt" and tests with a full-scale tail wheel were made on a rotating drum as well as on a runway in order to investigate the causes of the undesirable shimmy phenomena frequently occurring on airplane tail wheels, and the means of avoiding them. The small model (scale 1:10) permitted simulation of the mass, moments of inertia, and fuselage stiffness of the airplane and determination of their influence on the shimmy, whereas by means of the larger model with pneumatic tires (scale 1:2) more accurate investigations were made on the tail wheel itself. The results of drum and road tests show good agreement with one another and with model values. Detailed investigations were made regarding the dependence of the shimmy tendency on trail, rolling speed, load, size of tires, ground friction,and inclination of the swivel axis; furthermore, regarding the influence of devices with restoring effect on the tail wheel, and the friction damping required for prevention of shimmy. Finally observations from slow-motion pictures are reported and conclusions drawn concerning the influence of tire deformation.

Uranium tailings in the public eye

International Nuclear Information System (INIS)

Lyon, B.

1976-01-01

The ORNL field team visits to Grand Junction, Colorado, and to other sources of uranium mill tailings, are described. The radioactive hazards of these tailings, which are principally due to Th, Ra, Rn, and radon daughters, are discussed briefly. Government actions which were taken as a result of public concern are listed. The ORNL Health Physics Division mobile laboratory van and its use in assessing the tailings piles at Salt Lake City and elsewhere are described. The highest γ-ray background found was 155 mRem/y, with levels being as high as 1750 mRem/y near points of public access to piles. Some possible solutions to the problem are discussed

Top Incomes, Heavy Tails, and Rank-Size Regressions

Directory of Open Access Journals (Sweden)

Christian Schluter

2018-03-01

Full Text Available In economics, rank-size regressions provide popular estimators of tail exponents of heavy-tailed distributions. We discuss the properties of this approach when the tail of the distribution is regularly varying rather than strictly Pareto. The estimator then over-estimates the true value in the leading parametric income models (so the upper income tail is less heavy than estimated, which leads to test size distortions and undermines inference. For practical work, we propose a sensitivity analysis based on regression diagnostics in order to assess the likely impact of the distortion. The methods are illustrated using data on top incomes in the UK.

Predicting the long term stabilisation of uranium mill tailings

International Nuclear Information System (INIS)

Trojacek, J.

2004-01-01

The long-term stabilization and remediation of uranium mill tailings ponds is an important task for DIAMO. After uranium mining was stopped, DIAMO has to remediate more then 400 ha of tailings ponds at three locations. It is currently planned to cover the surface with low permeability materials with a slope of approx. 3% to protect the interior of the disposal facility from infiltrating rainwater. This entails to cover the free surface of these ponds with several hundred thousand tons of inert material. As a result of this load, the porewater from the tailings is expelled and the body of the impounded materials consolidates. Consolidation of tailings proceeds irregularly, depending on the internal structure of the tailings layers and on the progress of loading. The surface needs to be recontoured for a long time into the future. The topic of the DIAMO project is to predict and optimise the final surface contour of the tailings pond body, and to determine the time schedule and locations for recontouring work. The K1 tailings pond in Dolni Rozinka (Southern Moravia) is a typical example for such task. The average thickness of the tailings layer is around 25 m and the average porewater contents varies from 25 up to 40%. In the years 1998-99 a PHARE pilot project was undertaken that aimed to predict the quantity and quality of drainage and infiltration waters as a function of time. A new investigation programme (field, laboratory and modelling) has been implemented. The range of material properties and distribution of types of tailings was established. Orientation calculations of the tailings consolidation were made for fine slime zone. The results have shown that significant subsidence of the surface is to be expected after loading with inert material for the construction of an interim cover. (author)

Mine tailings dams: Characteristics, failure, environmental impacts, and remediation

International Nuclear Information System (INIS)

Kossoff, D.; Dubbin, W.E.; Alfredsson, M.; Edwards, S.J.; Macklin, M.G.; Hudson-Edwards, K.A.

2014-01-01

On a global scale demand for the products of the extractive industries is ever increasing. Extraction of the targeted resource results in the concurrent production of a significant volume of waste material, including tailings, which are mixtures of crushed rock and processing fluids from mills, washeries or concentrators that remain after the extraction of economic metals, minerals, mineral fuels or coal. The volume of tailings is normally far in excess of the liberated resource, and the tailings often contain potentially hazardous contaminants. A priority for a reasonable and responsible mining organization must be to proactively isolate the tailings so as to forestall them from entering groundwaters, rivers, lakes and the wind. There is ample evidence that, should such tailings enter these environments they may contaminate food chains and drinking water. Furthermore, the tailings undergo physical and chemical change after they have been deposited. The chemical changes are most often a function of exposure to atmospheric oxidation and tends to make previously, perhaps safely held contaminants mobile and available. If the tailings are stored under water, contact with the atmosphere is substantially reduced, thereby forestalling oxygen-mediated chemical change. It is therefore accepted practice for tailings to be stored in isolated impoundments under water and behind dams. However, these dams frequently fail, releasing enormous quantities of tailings into river catchments. These accidents pose a serious threat to animal and human health and are of concern for extractive industries and the wider community. It is therefore of importance to understand the nature of the material held within these dams, what best safety practice is for these structures and, should the worst happen, what adverse effects such accidents might have on the wider environment and how these might be mitigated. This paper reviews these factors, covering the characteristics, types and magnitudes

Activity, tail loss, growth and survivorship of male Psammodromus algirus

OpenAIRE

Salvador Milla, Alfredo; Veiga, José Pablo

2005-01-01

Males with autotomized tail were sighted more often and moved longer distances than males with complete tail. There were no significant differences in survival between the two groups. The increase of snout-vent lenght at emergence the following year was significantly lower for males with autotomized tail than for males with complete tail.

NMR determination of solvent dependent behavior and XRD structural properties of 4-carboxy phenylboronic acid: A DFT supported study

Science.gov (United States)

Dikmen, Gökhan; Alver, Özgür; Parlak, Cemal

2018-04-01

Solvent dependent structural properties of 4-carboxy phenylboronic acid (4-cpba) were investigated by X-ray diffraction (XRD) and nuclear magnetic resonance (NMR) spectroscopic methods. The molecular structure and geometric parameters were determined by some computational methods such as B3LYP/6-31 + G(3df,p), HF/aug-cc-pvtz and MP2/6-31G(d). Detailed elucidation of the structural and spectroscopic properties of 4-cpba was carried out with 1H, HETCOR and DOSY NMR experiments. Solvent effects on the structural properties were monitored on the changes of 1H NMR spectra by using various solvents and it was observed that 4-cpba shows serious structural preferences depending on the solvent used.

Surface grafting of a dense and rigid coordination polymer based on tri-para-carboxy-polychlorotriphenylmethyl radical and copper acetate

KAUST Repository

Mugnaini, Veró nica; Paradinas, Markos; Shekhah, Osama; Roques, Nans; Ocal, Carmen; Wö ll, Christof H.; Veciana, Jaume

2013-01-01

The step-by-step method is here presented as suitable to anchor on appropriately functionalized gold surfaces a metal-organic coordination polymer based on a non-planar trigonal tri-para-carboxy-polychlorotriphenylmethyl radical derivative and copper acetate. The structural characteristics of the grafted coordination polymer are derived during the step-wise growth from the real time changes in refractive index and oscillation frequency. The film thickness, as measured by scanning force microscopy, combined with the mass uptake value from the quartz crystal microbalance, are used to estimate an average density of the grafted metal-organic coordination polymer that suggests the formation of a dense and rather rigid thin film. This journal is © 2013 The Royal Society of Chemistry.

Elemental characterization of Tummalapalle uranium mill tailing

International Nuclear Information System (INIS)

Patra, A.C.; Sahoo, S.K.; Thakur, V.K.; Dubey, J.S.; Jha, S.K.; Tripathi, R.M.; Sharma, D.B.

2018-01-01

Elements are present in environmental matrices at varying concentrations. Their levels may increase due to anthropogenic activities like transportation, industrial activities, agriculture, urbanization and human activities. Trace elements can be classified as potentially toxic (eg. cadmium, arsenic, mercury, lead, nickel), probably essential (eg. cobalt, vanadium) and essential (eg. iron, zinc, copper, selenium, manganese). Due to the expansion of the Indian Nuclear Power Programme, new uranium mining sites are coming up. Mining and milling produce large quantities of low active mill tailings contained in engineered Tailings Ponds. The tailings are amenable for interaction with the geochemical forces and can act as potential sources of contamination. Thus it is necessary to ascertain the concentrations of elements that are present therein. In this paper we aim to characterize the uranium tailings generated from Tummalapalle uranium mining facility in Kadappa district, Andhra Pradesh, India

Application of dry stackable tailings technologies : providing the base for reclamation

Energy Technology Data Exchange (ETDEWEB)

Mikula, R.J. [Natural Resources Canada, Devon, AB (Canada). CANMET Energy Technology Centre

2010-07-01

The tailings containment structures are some of the largest man made features on the planet. This presentation demonstrated that dry stackable tailings technology may reduce the volume of the accumulated fluid fine tailings. Dry stackable tailings can contribute to boreal forest reclamation and reduce water requirement from the Athabasca River. Much of the water used for the production of each barrel of bitumen is recycled. The water is tied up in the pore spaces of the mineral sand, silt, and clay component which forms the mature fine tailings (MFT) that are contained behind large dykes. Syncrude and Suncor have used a wide variety of technologies to create a dry stackable tailings from this fluid fine tailings substrate. The availability of dry stackable tailings will open options for reclamation strategies that end with the original wetlands or boreal forest. Some of the tailings management options that would lead to a dry stackable tailings naturally also significantly decrease the barrels of water lost with each barrel of bitumen production. These options were discussed along with an analysis of their impact on recycle and pore water quality and quantity. There is an opportunity to remove residual bitumen during the transfer of fluid fine tailings to recover water and create dry stackable tailings. If this bitumen removal is extensive enough, it might be possible to use the dry stackable tailings directly as a reclamation material. tabs., figs.

Asphalt emulsion sealing of uranium mill tailings. 1979 annual report

International Nuclear Information System (INIS)

Hartley, J.N.; Koehmstedt, P.L.; Esterl, D.J.; Freeman, H.D.

1980-06-01

Uranium mill tailings are a source of low-level radiation and radioactive materials that may be released into the environment. Stabilization or disposal of these tailings in a safe and environmentally sound way is necessary to minimize radon exhalation and other radioactive releases. One of the most promising concepts for stabilizing uranium tailings is being investigated at the Pacific Northwest Laboratory: the use of asphalt emulsion to contain radon and other potentially hazardous materials in uranium tailings. Results of these studies indicate that radon flux from uranium tailings can be reduced by greater than 99% by covering the tailings with an asphalt emulsion that is poured on or sprayed on (3.0 to 7.0 mm thick), or mixed with some of the tailings and compacted to form an admixture seal (2.5 to 15.2 cm) containing 18 wt % residual asphalt

Leachability of metals from gold tailings by rainwater: an ...

African Journals Online (AJOL)

Mine leachates from gold tailings impoundments usually contain elevated concentrations of metals and sulphates that impact negatively on water quality. This study was aimed at assessing the leachability of such metals from tailings by rainwater. Oxidised and unoxidised tailings were leached experimentally and through ...

Development in helicopter tail boom strake applications in the US

Science.gov (United States)

Wilson, John C.; Kelley, Henry L.; Donahue, Cynthia C.; Yenni, Kenneth R.

1988-01-01

The use of a strake or spoiler on a helicopter tail boom to beneficially change helicopter tail boom air loads was suggested in the United States in 1975. The anticipated benefits were a change of tail boom loads to reduce required tail rotor thrust and power and improve directional control. High tail boom air loads experienced by the YAH-64 and described in 1978 led to a wind tunnel investigation of the usefullness of strakes in altering such loads on the AH-64, UH-60, and UH-1 helicopters. The wind tunnel tests of 2-D cross sections of the tail boom of each demonstrated that a strake or strakes would be effective. Several limited test programs with the U.S. Army's OH-58A, AH-64, and UH-60A were conducted which showed the effects of strakes were modest for those helicopters. The most recent flight test program, with a Bell 204B, disclosed that for the 204B the tail boom strake or strakes would provide more than a modest improvement in directional control and reduction in tail rotor power.

Tail-robust scheduling using Limited Processor Sharing.

NARCIS (Netherlands)

Nair, J.K.; Wierman, A.; Zwart, A.P.

2010-01-01

From a rare events perspective, scheduling disciplines that work well under light (exponential) tailed workload distributions do not perform well under heavy (power) tailed workload distributions, and vice versa, leading to fundamental problems in designing schedulers that are robust to

The radiological impacts of uranium mill tailings - A review with special emphasis on the tailings at Ranstad in Sweden

International Nuclear Information System (INIS)

Snihs, J.O.

1978-01-01

The environmental impact of uranium mill talings can be expressed in collective dose commitment and corresponding detriment per MWe.y energy produced by the uranium which corresponds to the amount of waste interest, The methods of dose commitment calculations are discussed and it is suggested for the purpose of estimation of the detriment to limit the commitment to 10,000 years. The external radiation from the tailings is easily reduced by covering but in case of a future settlement on the tailings the collective dose commitment will be some hundreds to thousands of manrad/MWe.y depending on the quality of the uranium ore. The dispersion of dust from uncovered tailings is mainly a local problem and the collective dose commitment for critical tissues in the lung will be less than a manrad/MWe.y. In the long run the cover may be lost and the resultant collective dose commitment for the critical tissues in the lung will be a few tens of manrad/MWe.y depending on the quality of the tailings. The effects of global dispersion of the material in the tailings are also discussed

Evaluation of inactive uranium mill tailings sites for liner requirements: Characterization and interaction of tailings, soil, and liner materials

International Nuclear Information System (INIS)

Relyea, J.F.; Martin, W.J.

1982-01-01

This paper summarizes the results of laboratory experiments using soils from Clive, Utah and tailings samples from three inactive uranium processing sites. The results are to be used to predict contaminant behavior for comparison with the regulatory criteria to decide whether a liner is needed. The interactions of leachates with soils and liner material were studied using both batch and column methods. It is determined that batch leaching tests are suitable for screening a large number of tailings samples for relative contaminant concentrations between samples but not for determining contaminant concentrations and release rates in tailings leachate. The results of column leaching tests on samples of tailings from inactive sites indicate that contaminant concentrations are highest in initial leachate from the columns and that concentrations decrease by an order of magnitude or more after one pore volume

A new procedure for deep sea mining tailings disposal

NARCIS (Netherlands)

Ma, W.; Schott, D.L.; Lodewijks, G.

2017-01-01

Deep sea mining tailings disposal is a new environmental challenge related to water pollution, mineral crust waste handling, and ocean biology. The objective of this paper is to propose a new tailings disposal procedure for the deep sea mining industry. Through comparisons of the tailings disposal

upstream region of the myostatin gene in four chicken breeds and its

African Journals Online (AJOL)

user

2012-05-17

May 17, 2012 ... processing site and a carboxy-terminal region containing nine cysteines ... cultivated meat breed (minitype) and the Youxi chicken is a local breed raised for ..... Allele R was the additive gene on growth traits. Bian chickens ...

Keratin 8 phosphorylation in vitro by cAMP-dependent protein kinase occurs within the amino- and carboxyl-terminal end domains.

Science.gov (United States)

Ando, S; Tokui, T; Yano, T; Inagaki, M

1996-04-05

We reported earlier that phosphorylation in vitro of keratin filaments reconstituted from rat type I keratin 18 and type II keratin 8 by cAPM-dependent protein kinase induces disassembly of the keratin filament structure. Keratin 8 rather than keratin 18 was the major target of the kinase. We have now identified the sites on rat keratin 8 for cAMP-dependent protein kinase. Sequential analysis of the purified phosphoropeptides, together with the known primary sequence, revealed that four major sites, Ser-12, Ser-23, Ser-36, and Ser-50, and three minor sites, Ser-8, Ser-33, Ser-42, are located in the amino-terminal head domain, while three minor sites, Ser-416, Ser-423 and Ser-425 locate in the carboxyl-terminal tail domain.

Long-term stabilization of uranium mill tailings

International Nuclear Information System (INIS)

Voorhees, L.D.; Sale, M.J.; Webb, J.W.; Mulholland, P.J.

1983-01-01

The primary hazard associated with uranium mill tailings is exposure to a radioactive gas, radon-222, the concentration of which has been correlated with the occurrence of lung cancer. Previous studies on radon attenuation conclude that the placement of earthen cover materials over the tailings is the most effective technique for reducing radioactive emissions and dispersal of tailings. The success of such a plan, however, is dependent on ensuring the long-term integrity of these cover materials. Soil erosion from water and wind is the major natural cause of destabilizing earthen cover materials. Field data related to the control of soil loss are limited and only indirectly apply to the problem of isolation of uranium mill tailings over very long time periods (up to 80,000 a). However, sufficient information is available to determine benefits that will result from the changes in specific design variables and to evaluate the need for different design strategies among potential disposal sites. The three major options available for stabilization of uranium mill tailings are: rock cover, soil and revegetation, or a combination of both on different portions of the tailings cover. The optimal choice among these alternatives depends on site-specific characteristics such as climate and local geomorphology and soils, and on design variables such as embankment, heights and slopes, modification of upstream drainage, and revegetation practices. Generally, geomorphic evidence suggests that use of soil and vegetation alone will not be adequate to reduce erosion on slopes greater than about 5 to 9%

Double strand break rejoining by the Ku-dependent mechanism of non-homologous end-joining

International Nuclear Information System (INIS)

Jeggo, P.; Singleton, B.; Beamish, H.; Priestley, A.

1999-01-01

The DNA-dependent protein kinase functions in the repair of DNA double strand breaks (DSBs) and in V(D)J recombination. To gain insight into the function of DNA-PK in this process we have carried out a mutation analysis of Ku80 and DNA-PKcs. Mutations at multiple sites within the N-terminal two thirds of Ku80 result in loss of Ku70/80 interaction, loss of DNA end-binding activity and inability to complement Ku80 defective cell fines. In contrast, mutations in the carboxy terminal region of the protein do not impair DNA end-binding activity but decrease the ability of Ku to activate DNA-PK. To gain insight into important functional domains within DNA-PKcs, we have analysed defective mutants, including the mouse scid cell line, and the rodent mutants, ire-20 and V-3. Mutational changes in the carboxy terminal region have been identified in all cases. Our results strongly suggest that the C-terminus of DNA-PKcs is required for kinase activity. (author)

Thresher sharks use tail-slaps as a hunting strategy.

Science.gov (United States)

Oliver, Simon P; Turner, John R; Gann, Klemens; Silvosa, Medel; D'Urban Jackson, Tim

2013-01-01

The hunting strategies of pelagic thresher sharks (Alopias pelagicus) were investigated at Pescador Island in the Philippines. It has long been suspected that thresher sharks hunt with their scythe-like tails but the kinematics associated with the behaviour in the wild are poorly understood. From 61 observations recorded by handheld underwater video camera between June and October 2010, 25 thresher shark shunting events were analysed. Thresher sharks employed tail-slaps to debilitate sardines at all times of day. Hunting events comprised preparation, strike, wind-down recovery and prey item collection phases, which occurred sequentially. Preparation phases were significantly longer than the others, presumably to enable a shark to windup a tail-slap. Tail-slaps were initiated by an adduction of the pectoral fins, a manoeuvre that changed a thresher shark's pitch promoting its posterior region to lift rapidly, and stall its approach. Tail-slaps occurred with such force that they may have caused dissolved gas to diffuse out of the water column forming bubbles. Thresher sharks were able to consume more than one sardine at a time, suggesting that tail-slapping is an effective foraging strategy for hunting schooling prey. Pelagic thresher sharks appear to pursue sardines opportunistically by day and night, which may make them vulnerable to fisheries. Alopiids possess specialist pectoral and caudal fins that are likely to have evolved, at least in part, for tail-slapping. The evidence is now clear; thresher sharks really do hunt with their tails.

TIDAL TAILS OF MINOR MERGERS: STAR FORMATION EFFICIENCY IN THE WESTERN TAIL OF NGC 2782

International Nuclear Information System (INIS)

Knierman, Karen; Scowen, Paul; Jansen, Rolf A.; Knezek, Patricia M.; Wehner, Elizabeth

2012-01-01

While major mergers and their tidal debris are well studied, they are less common than minor mergers (mass ratios ∼ SFR ) to be several orders of magnitude less than expected from the total gas density. Together with extended FUV+NUV emission from Galaxy Evolution Explorer along the tail, this indicates a low global star formation efficiency in the tidal tail producing lower mass star clusters. The H II region that we observed has a local (few-kiloparsec scale) Σ SFR from Hα that is less than that expected from the total gas density, which is consistent with other observations of tidal debris. The star formation efficiency of this H II region inferred from the total gas density is low, but normal when inferred from the molecular gas density. These results suggest the presence of a very small, locally dense region in the western tail of NGC 2782 or of a low-metallicity and/or low-pressure star-forming region.

Manual for the sampling of uranium mine tailings

International Nuclear Information System (INIS)

Feenstra, S.; Reades, D.W.; Cherry, J.A.; Chambers, D.B.; Case, G.G.; Ibbotson, B.G.

1983-04-01

The purpose of this manual is to describe the requisite sampling procedures to provide a basis for the application of uniform high-quality standards to detailed geotechnical, hydrogeological, geochemical and air quality measurements at Canadian uranium tailings disposal sites. The report describes the objective and scope of a sampling program, the preliminary data collection, and the procedures for sampling of tailings solids, surface water and seepage, tailings porewater, and wind-blown dust and radon

Price Tails in the Smith and Farmer's Model

Czech Academy of Sciences Publication Activity Database

Šmíd, Martin

2008-01-01

Roč. 15, č. 25 (2008), s. 31-40 ISSN 1212-074X R&D Projects: GA ČR GA402/07/1113; GA ČR(CZ) GA402/06/1417 Institutional research plan: CEZ:AV0Z10750506 Keywords : limit order market * continuous double auction * price increments * fat tails * tail exponent Subject RIV: AH - Economics http://library.utia.cas.cz/separaty/2008/E/smid-price tails in the smith and farmer's model.pdf

Review of fugitive dust control for uranium mill tailings

International Nuclear Information System (INIS)

Li, C.T.; Elmore, M.R.; Hartley, J.N.

1983-01-01

An immediate concern associated with the disposal of uranium mill tailings is that wind erosion of the tailings from an impoundment area will subsequently deposit tailings on surrounding areas. Pacific Northwest Laboratory (PNL), under contract to the U.S. Nuclear Regulatory Commission, is investigating the current technology for fugitive dust control. Different methods of fugitive dust control, including chemical, physical, and vegetative, have been used or tested on mill tailings piles. This report presents the results of a literature review and discussions with manufacturers and users of available stabilization materials and techniques

A tale of two tails: Not just skin deep

Directory of Open Access Journals (Sweden)

Abhijit Dutta

2015-01-01

Full Text Available The dorsal cutaneous appendage or the so called human tail is a rare congenital anomaly protruding from the lumbo-sacro-coccygeal area. These caudal appendages are divided into true-tails and pseudo-tails. We report here two cases of congenital pseudo-tail with underlying spina bifida and lipo-meningocele. In this article we seek to emphasize that, as the skin and nervous systems are intimately linked by their similar ectodermal origin, a dorsal appendage may be regarded as a cutaneous marker of the underlying spinal dysraphism.

Review of fugitive dust control for uranium mill tailings

Energy Technology Data Exchange (ETDEWEB)

Li, C.T.; Elmore, M.R.; Hartley, J.N.

1983-01-01

An immediate concern associated with the disposal of uranium mill tailings is that wind erosion of the tailings from an impoundment area will subsequently deposit tailings on surrounding areas. Pacific Northwest Laboratory (PNL), under contract to the U.S. Nuclear Regulatory Commission, is investigating the current technology for fugitive dust control. Different methods of fugitive dust control, including chemical, physical, and vegetative, have been used or tested on mill tailings piles. This report presents the results of a literature review and discussions with manufacturers and users of available stabilization materials and techniques.

CT findings of normal pancreatic tail: variety of morphology and location

Energy Technology Data Exchange (ETDEWEB)

Han, Hye Seung; Son, San Hoo; Moon, Gae Hyuk; Kim, Hu Ho; Gong Jae Chul; Yang Jae Boum [Inchon Christian Hospital, Inchon (Korea, Republic of); Park, Mee Sook [Jaesung Hospital. (Korea, Republic of)

1998-02-01

To determine the morphology and location of normal pancreatic tail, as seen on abdominal CT. A hundred and one patients without pancreatic disease underwent CT scanning. We then determined how to relate the location of the pancreatic tail with the splenic hilum, left kidney, and pancreatic body. We compared the thickness of the tail with that of the body and analysed of the morphology of the tail. Seventy-seven percent of all pancreatic tails were located below the splenic hilum, with 59% of this proportion located 1 to 2 cm below. Fifty percent of tails were located at the level of the uppermost quarter of the left kidney, and a further 27% at the level of the second quarter; 75 % were located in the ventrolateral portion of this kidney and 23% in the ventral portion. In 48% of patients, the pancreatic tail and body were the same thickness, and in a further 48 %, the tail was thicker than the body. In 34% of patients, the tail showed focal bulging, and in another 32%, it tapered smoothly. Forty seven percent of tails were located below the pancreatic body and a further 37% were found at the same level as the body. Abdominal CT scans showed differing morphology and location of the pancreatic tail. The recognition of these variations will diminish speculation as to their true nature. (author). 12 refs., 4 figs.

Electrodialytic Remediation of Copper Mine Tailings

DEFF Research Database (Denmark)

Hansen, H.K.; Rojo, A.; Ottosen, L.M.

2012-01-01

This work compares and evaluates sixteen electrodialytic laboratory remediation experiments on copper mine tailings. Different parameters were analysed, such as remediation time, addition of desorbing agents, and the use of pulsed electrical fields.......This work compares and evaluates sixteen electrodialytic laboratory remediation experiments on copper mine tailings. Different parameters were analysed, such as remediation time, addition of desorbing agents, and the use of pulsed electrical fields....

Utilisation of iron ore tailings as aggregates in concrete

Directory of Open Access Journals (Sweden)

Francis Atta Kuranchie

2015-12-01

Full Text Available Sustainable handling of iron ore tailings is of prime concern to all stakeholders who are into iron ore mining. This study seeks to add value to the tailings by utilising them as a replacement for aggregates in concrete. A concrete mix of grade 40 MPa was prepared in the laboratory with water–cement ratio of 0.5. The concrete were cured for 1, 2, 3, 7, 14 and 28 days. The properties of the concrete such as workability, durability, density, compressive strength and indirect tensile strength were tested. A controlled mix of concrete was also prepared in similar way using conventional materials and the results were compared with the tailings concrete. It was found that the iron ore tailings may be utilised for complete replacement for conventional aggregates in concrete. The iron ore tailings aggregates concrete exhibited a good mechanical strength and even in the case of compressive strength, there was an improvement of 11.56% over conventional aggregates concrete. The indirect tensile strength did not improve against the control mix due high content of fines in the tailings aggregates but showed 4.8% improvement compared with the previous study where the conventional fine aggregates was partially replaced by 20% with iron ore tailings.

An M-estimator of multivariate tail dependence

NARCIS (Netherlands)

Krajina, A.

2010-01-01

AN M-ESTIMATOR OF TAIL DEPENDENCE. Extreme value theory is the part of probability and statistics that provides the theoretical background for modeling events that almost never happen. The estimation of the dependence between two or more such unlikely events (tail dependence) is the topic of this

Some properties of Suncor oil sands tailings

Energy Technology Data Exchange (ETDEWEB)

Guo, C.; Wells, P.S. [Suncor Energy, Fort McMurray, AB (Canada)

2010-07-01

This PowerPoint presentation discussed a pond assessment program conducted by Suncor to determine the properties of mature fine tailings (MFT) and composite tailings (CT) at reclaimed and unreclaimed sites. Mudline and sonar depth sounding techniques were used to determine solids contents. A wire line sampler provided point depth samples used for laboratory analyses. Continuous drill samples were obtained in order to characterize bottom fines and clay content. A flow penetration tests was used to determine the undrained shear strength of the soft tailings. A 3-D block model was then used to estimate soft material properties and to generate material distribution volumes and tonnages for different property ranges. The study showed that the block modelling techniques provide a more accurate tailings pond assessment than traditional approaches. While slow, ongoing static consolidation was observed, surface capping and artificial dewatering are required to provide trafficable ground for the final reclamation of the sites. tabs., figs.

Flotation tailings as a raw material for ceramic building materials

Energy Technology Data Exchange (ETDEWEB)

Burmistrov, V N; Karpunina, T I; Smolin, V N

1986-02-01

The VNIIstrom research institute developed a method for utilizing flotation tailings for production of bricks. Tailings are dewatered using filter presses. After dewatering, moisture content in the tailings ranges from 25 to 26%. Tailings are mixed with chamotte with a grain size to 2 mm. Using 30% chamotte improves mechanical and physical properties of the bricks and reduces energy consumption of brick firing. Tailings mixed with chamotte are granulated and dried on a conveyor. Granules with moisture content reduced to the optimum level are mixed a second time and formed in a press. The bricks are fired in a tunnel kiln with modified design. The bricks made of flotation tailings mixed with 30% chamotte are characterized by mechanical properties comparable to those of high quality bricks made of conventional materials.

The γ-secretase cleavage product of Polycystin-1 regulates TCF and CHOP-mediated transcriptional activation through a p300-dependent mechanism

Science.gov (United States)

Merrick, David; Chapin, Hannah; Baggs, Julie E.; Yu, Zhiheng; Somlo, Stefan; Sun, Zhaoxia; Hogenesch, John B.; Caplan, Michael

2011-01-01

Summary Mutations in Pkd1, encoding polycystin-1 (PC1), cause Autosomal Dominant Polycystic Kidney Disease (ADPKD). We show that the carboxy-terminal tail (CTT) of PC1 is released by γ-secretase-mediated cleavage and regulates the Wnt and CHOP pathways by binding the transcription factors TCF and CHOP, disrupting their interaction with the common transcriptional co-activator p300. Loss of PC1 causes increased proliferation and apoptosis, while reintroducing PC1-CTT into cultured Pkd1 null cells reestablishes normal growth rate, suppresses apoptosis, and prevents cyst formation. Inhibition of γ-secretase activity impairs the ability of PC1 to suppress growth and apoptosis, and leads to cyst formation in cultured renal epithelial cells. Expression of the PC1-CTT is sufficient to rescue the dorsal body curvature phenotype in zebrafish embryos resulting from either γ-secretase inhibition or suppression of Pkd1 expression. Thus, γ-secretase-dependent release of the PC1-CTT creates a protein fragment whose expression is sufficient to suppress ADPKD-related phenotypes in vitro and in vivo. PMID:22178500

General review of the state of uranium milling tailings in Ukraine

International Nuclear Information System (INIS)

Holubiev, V.

2002-01-01

The mining and milling of uranium ore are produced in Ukraine since 1948. During this time eleven tailings were formed at the large territory in the region of cities Zhovty Vody and Dnepropetrovsk. One tailing is now in operation. Other ten tailings are under conservation and are producing environmental impact of different extent. Any of tailings was not subjected to recovery. By means of the enterprises, which have on their territory tailings, the monitoring is carried out for radionuclides coming in underground waters. The samples of underground water are taken from wells that are located at the tailing perimeter. The list of tailings, quantity of stored material, and radionuclides activity are submitted in the table. The supervision shows, that all tailings to some extent are the issue of radionuclides diffusion. The brief characteristic of the largest tailings is submitted. The supervision shows that all tailings to some extent are the issue of radionuclides diffusion. The brief characteristic of the largest tailings is submitted. Most of tailings are located in natural folds of a region relief, however one of them (KBG) is arranged in career with depth 60-65 m. Iron ore was mined in this career and career is located on distance 2.5 km from an inhabited zone. Career was not equipped by anti filtration barriers before it was started to fill it with sludge. In total 12.4·10 6 m 3 of tails is placed in it with general activity about 1 PBq. When tailing's filling was finished at 1991 its surface was covered by 1,7 m layer of loamy soil. The tailing creation resulted in change of hydro-geological conditions of a platform and in appearance of man-caused water-bearing horizon. The halo of pollution of underground waters is moving from the bounds of the site towards the inhabited zone of Zhovty Vody city. Now polluted by radionuclides water is detected at the distance of 1.5 km from tailing. According to forecast estimations in 15 years the pollution will move forward

TAILS N-Terminomics and Proteomics Show Protein Degradation Dominates over Proteolytic Processing by Cathepsins in Pancreatic Tumors

Directory of Open Access Journals (Sweden)

Anna Prudova

2016-08-01

Full Text Available Deregulated cathepsin proteolysis occurs across numerous cancers, but in vivo substrates mediating tumorigenesis remain ill-defined. Applying 8-plex iTRAQ terminal amine isotopic labeling of substrates (TAILS, a systems-level N-terminome degradomics approach, we identified cathepsin B, H, L, S, and Z in vivo substrates and cleavage sites with the use of six different cathepsin knockout genotypes in the Rip1-Tag2 mouse model of pancreatic neuroendocrine tumorigenesis. Among 1,935 proteins and 1,114 N termini identified by TAILS, stable proteolytic products were identified in wild-type tumors compared with one or more different cathepsin knockouts (17%–44% of 139 cleavages. This suggests a lack of compensation at the substrate level by other cathepsins. The majority of neo-N termini (56%–83% for all cathepsins was consistent with protein degradation. We validated substrates, including the glycolytic enzyme pyruvate kinase M2 associated with the Warburg effect, the ER chaperone GRP78, and the oncoprotein prothymosin-alpha. Thus, the identification of cathepsin substrates in tumorigenesis improves the understanding of cathepsin functions in normal physiology and cancer.

The hydrogeochemistry of four inactive tailings impoundments: Perspectives on tailings pore-water evolution

International Nuclear Information System (INIS)

Blowes, D.W.; Cherry, J.A.; Reardon, E.J.

1987-01-01

Extensive hydrogeochemical investigations are currently underway at three inactive tailings impoundments in Canada. These programs include detailed measurements of pore-water and gas-phase geochemistry through the vadose zone and the groundwater zone. An extensive piezometer network has been installed at each location to monitor the groundwater flow regime. All of the impoundments studied have been inactive for 15 to 25 years, sufficient time for extensive tailings pore-water evolution. The study areas include a very high-sulfide impoundment, a low-sulfide, high-carbonate impoundment, a low-sulfide, very low-carbonate impoundment, and a moderately high-sulfide impoundment. The pore water at each of the sites has evolved in a distinctly different and characteristic manner, representing broad styles of tailings pore-water evolution. At the high sulfide impoundment the oxidation of sulfide minerals has resulted in low pH, high redox potential conditions, with Fe 2+ concentrations in excess of 60,000 mg/L. At a depth of about 40 cm a 10 cm thick layer of ferrous and calcium sulfate minerals has precipitated. This hardpan layer limits the downward movement of O 2 and infiltrating pore waters. As a result, the pore water chemistry, both above and below the hardpan layer, has remained relatively unchanged over the past 10 years. The low-sulfide, high-carbonate tailings are sufficiently well buffered that no low pH conditions are present. The high pH conditions limit the concentrations of the metals released by sulfide mineral oxidation to levels that are two or three orders of magnitude less than is observed at the high-sulfide site. Pore waters at the low-sulfide, low-carbonate site were sampled by other researchers from the University of Waterloo

[False positive serum des-gamma-carboxy prothrombin after resection of hepatocellular carcinoma].

Science.gov (United States)

Hiramatsu, Kumiko; Tanaka, Yasuhito; Takagi, Kazumi; Iida, Takayasu; Takasaka, Yoshimitsu; Mizokami, Masashi

2007-04-01

Measurements of serum concentrations of des-gamma-carboxy-prothrombin (PIVKA-II) are widely used for diagnosing hepatocellular carcinoma (HCC). Recently, when we evaluated the correlation of PIVKA-II between two commercially available PIVKA-II immunoassay kits (Lumipulse f vs. Picolumi) to introduce it in our hospital, false high values of PIVKA-II were observed in Lumipulse assay. Four(4%) of 100 serum samples showed false high values, and all of them were obtained from patients less than 2 month after curative resection of HCC. Examining additional 7 patients with HCC resection, serum samples from the 5 patients had the same trend. To elucidate the non-specific reaction by Lumipulse assay which utilized alkaline phosphatase (ALP) enzymatic reaction, inhibition assays by various absorbents such as inactive ALP and IgM antibodies were performed. Excess of inactive ALP reduced the high values of PIVKA-II. Note that anti-bleeding sheets (fibrinogen combined drug), which included bovine thrombin, were directly attached on liver of all patients with HCC resection in this study. As the sheets also contaminate ALP and probably produce IgM antibodies to ALP, the IgM may cross-react with anti-PIVKA-II antibodies directly. Taken together, it was suggested that produced antibodies against ALP derived from anti-bleeding sheets led false high values of PIVKA-II in the patients with HCC resection.

Variation of Pore Water Pressure in Tailing Sand under Dynamic Loading

Directory of Open Access Journals (Sweden)

Jia-xu Jin

2018-01-01

Full Text Available Intense vibration affects the pore water pressure in a tailing dam, with the tendency to induce dam liquefaction. In this study, experiments were performed wherein model tailing dams were completely liquefied by sustained horizontal dynamic loading to determine the effects of the vibration frequency, vibration amplitude, and tailing density on the pore water pressure. The results revealed four stages in the increase of the tailing pore water pressure under dynamic loading, namely, a slow increase, a rapid increase, inducement of structural failure, and inducement of complete liquefaction. A lower frequency and smaller amplitude of the vibration were found to increase the time required to achieve a given pore water pressure in dense tailings. Under the effect of these three factors—vibration frequency and amplitude and tailing density—the tailing liquefaction time varied nonlinearly with the height from the base of the tailing dam, with an initial decrease followed by an increase. The pore pressure that induced structural failure also gradually decreased with increasing height. The increase in the tailing pore pressure could be described by an S-shaped model. A complementary multivariate nonlinear equation was also derived for predicting the tailing pore water pressure under dynamic loading.

Near-threshold quantization and scattering for deep potentials with attractive tails

International Nuclear Information System (INIS)

Eltschka, Christopher; Moritz, Michael J.; Friedrich, Harald

2000-01-01

Near-threshold properties of bound and continuum states in a deep potential with an attractive tail depend essentially on a few 'tail parameters', which are determined by the properties of the potential tail beyond the region of r-values where WKB wavefunctions are accurate solutions of the Schroedinger equation. One of these tail parameters is a length parameter which defines the singular contribution to the level density just below threshold and the reflectivity of the tail of the potential just above threshold; another is a phase difference which, together with the length parameter, determines the mean scattering length. The near-threshold quantization rule and the actual scattering length are determined by the tail parameters together with a dimensionless constant depending on the zero-energy value of the WKB action integral. We study potentials with tails consisting of two inverse-power terms, V(r)∼-C α /r α -C α 1 /r α 1 ,α 1 >α>2and we derive exact analytical expressions for the tail parameters in the special case α 1 =2(α-1). This enables us to demonstrate the effect of a significant non-homogeneity of the potential tail on the results derived previously for homogeneous tails. (author)

Two active galaxies with tidal tails and companions

International Nuclear Information System (INIS)

Keel, W.C.

1985-01-01

Spectroscopic, imaging, and radio observations of the tidally disturbed active systems VV 144 and I Zw 96 are presented, and indicate that the prominent optical extensions seen in both cases represent tidal tails rather than matter ejected from their nuclei (jets). This conclusion is based on the presence of stellar spectral features in the tails, lack of significant ionized gas over most of their length, and lack of radio emission outside the nuclei. Discrete knots in these tails are identified with remnant cores of the companion galaxies responsible for the morphological disturbances of the main galaxies and perhaps contributing to their nuclear activity. In both cases, the dynamics of the interactions are unusual in nature or viewing geometry. VV 144 is seen in the common plane of interaction and disk rotation, appearing strongly foreshortened. I Zw 96 shows tails associated with two companions; each is accompanied by changes in tail structure. This may be the result of a binary system of spirals colliding with a giant elliptical galaxy. 18 references

Interactions of tailings leachate with local liner materials found at Canonsburg, Pennsylvania

International Nuclear Information System (INIS)

Dodson, M.E.; Gee, G.W.; Serne, R.J.

1984-04-01

The mill tailings site at Canonsburg, Pennsylvania is the first mill site to receive remedial action under the Department of Energy's Uranium Mill Tailings Remedial Action Program. Part of this remedial action will require excavating the 53,500 m 3 (70,000 yd 3 ) of tailings on the site having a specific activity exceeding 100 pCi/g, and encapsulating these contaminated tailings in a clay-lined cell. As part of the remedial action effort, Pacific Northwest Laboratory has been studying the interactions of tailings and tailings leachate with locally occurring clays proposed for liner materials. These studies include physical and chemical characterization of amended and unamended local clays, chemical characterization of the tailings, column studies of tailings leached with deionized water, and column studies of clays contacted with tailings solutions to determine the attenuation properties of the proposed liner materials. Column studies of tailings leached with deionized water indicated that the Canonsburg tailings could represent a source of soluble radium-226 and uranium-238, several trace metals, cations, and the anions SO 4 , NO 3 , and Cl. Of these soluble contaminants, uranium-238, radium-226, the trace metals As and Mo, and the anions F and SO 4 were present at levels exceeding maximum concentration levels in the tailings leaching column effluents. However, local clays, both in amended and unamended form were effective in attenuating contaminant migration. The soil amendments tested failed to increase radium attenuation. The tailings leaching studies indicated that the tailings will produce leachates of neutral pH and relatively low contaminant levels for at least 200 years. We believe that compacting the tailings within the encapsulation cell will help to reduce leaching of contaminants from the liner system, since very low permeabilities ( -8 cm/s) were observed for even slightly compacted tailings materials

Spectrum of human tails: A report of six cases

Directory of Open Access Journals (Sweden)

Biswanath Mukhopadhyay

2012-01-01

Full Text Available Human tail is a curiosity, a cosmetic stigma and presents as an appendage in the lumbosacral region. Six patients of tail in the lumbosacral region are presented here to discuss the spectrum of presentation of human tails. The embryology, pathology and treatment of this entity are discussed along with a brief review of the literature.

Analytical Solution and Application for One-Dimensional Consolidation of Tailings Dam

Directory of Open Access Journals (Sweden)

Hai-ming Liu

2018-01-01

Full Text Available The pore water pressure of tailings dam has a very great influence on the stability of tailings dam. Based on the assumption of one-dimensional consolidation and small strain, the partial differential equation of pore water pressure is deduced. The obtained differential equation can be simplified based on the parameters which are constants. According to the characteristics of the tailings dam, the pore water pressure of the tailings dam can be divided into the slope dam segment, dry beach segment, and artificial lake segment. The pore water pressure is obtained through solving the partial differential equation by separation variable method. On this basis, the dissipation and accumulation of pore water pressure of the upstream tailings dam are analyzed. The example of typical tailings is introduced to elaborate the applicability of the analytic solution. What is more, the application of pore water pressure in tailings dam is discussed. The research results have important scientific and engineering application value for the stability of tailings dam.

C-terminal phenylalanine of bacteriophage T7 single-stranded DNA-binding protein is essential for strand displacement synthesis by T7 DNA polymerase at a nick in DNA.

Science.gov (United States)

Ghosh, Sharmistha; Marintcheva, Boriana; Takahashi, Masateru; Richardson, Charles C

2009-10-30

Single-stranded DNA-binding protein (gp2.5), encoded by gene 2.5 of bacteriophage T7, plays an essential role in DNA replication. Not only does it remove impediments of secondary structure in the DNA, it also modulates the activities of the other replication proteins. The acidic C-terminal tail of gp2.5, bearing a C-terminal phenylalanine, physically and functionally interacts with the helicase and DNA polymerase. Deletion of the phenylalanine or substitution with a nonaromatic amino acid gives rise to a dominant lethal phenotype, and the altered gp2.5 has reduced affinity for T7 DNA polymerase. Suppressors of the dominant lethal phenotype have led to the identification of mutations in gene 5 that encodes the T7 DNA polymerase. The altered residues in the polymerase are solvent-exposed and lie in regions that are adjacent to the bound DNA. gp2.5 lacking the C-terminal phenylalanine has a lower affinity for gp5-thioredoxin relative to the wild-type gp2.5, and this affinity is partially restored by the suppressor mutations in DNA polymerase. gp2.5 enables T7 DNA polymerase to catalyze strand displacement DNA synthesis at a nick in DNA. The resulting 5'-single-stranded DNA tail provides a loading site for T7 DNA helicase. gp2.5 lacking the C-terminal phenylalanine does not support this event with wild-type DNA polymerase but does to a limited extent with T7 DNA polymerase harboring the suppressor mutations.

C-terminal Phenylalanine of Bacteriophage T7 Single-stranded DNA-binding Protein Is Essential for Strand Displacement Synthesis by T7 DNA Polymerase at a Nick in DNA*

Science.gov (United States)

Ghosh, Sharmistha; Marintcheva, Boriana; Takahashi, Masateru; Richardson, Charles C.

2009-01-01

Single-stranded DNA-binding protein (gp2.5), encoded by gene 2.5 of bacteriophage T7, plays an essential role in DNA replication. Not only does it remove impediments of secondary structure in the DNA, it also modulates the activities of the other replication proteins. The acidic C-terminal tail of gp2.5, bearing a C-terminal phenylalanine, physically and functionally interacts with the helicase and DNA polymerase. Deletion of the phenylalanine or substitution with a nonaromatic amino acid gives rise to a dominant lethal phenotype, and the altered gp2.5 has reduced affinity for T7 DNA polymerase. Suppressors of the dominant lethal phenotype have led to the identification of mutations in gene 5 that encodes the T7 DNA polymerase. The altered residues in the polymerase are solvent-exposed and lie in regions that are adjacent to the bound DNA. gp2.5 lacking the C-terminal phenylalanine has a lower affinity for gp5-thioredoxin relative to the wild-type gp2.5, and this affinity is partially restored by the suppressor mutations in DNA polymerase. gp2.5 enables T7 DNA polymerase to catalyze strand displacement DNA synthesis at a nick in DNA. The resulting 5′-single-stranded DNA tail provides a loading site for T7 DNA helicase. gp2.5 lacking the C-terminal phenylalanine does not support this event with wild-type DNA polymerase but does to a limited extent with T7 DNA polymerase harboring the suppressor mutations. PMID:19726688

Vertical Tail Buffeting Alleviation Using Piezoelectric Actuators: Some Results of the Actively Controlled Response of Buffet-Affected Tails (ACROBAT) Program

Science.gov (United States)

Moses, Robert W.

1997-01-01

A 1/6-scale F-18 wind-tunnel model was tested in the Transonic Dynamics Tunnel at the NASA Langley Research Center as part of the Actively Controlled Response Of Buffet Affected Tails (ACROBAT) program to assess the use of active controls in reducing vertical tail buffeting. The starboard vertical tail was equipped with an active rudder and the port vertical tail was equipped with piezoelectric actuators. The tunnel conditions were atmospheric air at a dynamic pressure of 14 psf. By using single-input-single-output control laws at gains well below the physical limits of the actuators, the power spectral density of the root strains at the frequency of the first bending mode of the vertical tail was reduced by as much as 60 percent up to angles of attack of 37 degrees. Root mean square (RMS) values of root strain were reduced by as much as 19 percent. Buffeting alleviation results when using the rudder are presented for comparison. Stability margins indicate that a constant gain setting in the control law may be used throughout the range of angle of attack tested.

Leachability of radioactive constituents from uranium mine tailings

International Nuclear Information System (INIS)

Bryant, D.N.; Cohen, D.B.; Durham, R.W.

1979-04-01

A project was carried out using lysimeters to determine the leaching of radioactive constituents and BaRaSO 4 from abandoned uranium mine tailings. Lime addition to the surface of acidic abandoned tailings did not reduce the level of radioactive constituents in the leachate. Considerable increases in levels of the radionuclides 230 Th, 232 Th and 22 /8Th, as well as gross alpha and beta activity in the leachate, occurred five months after recycling of BaRaSO 4 sediments to the surface layers of abandoned tailings. After nine months of leaching, the levels of 226 Ra in the leachate were 30% greater than the tailings plus sediment treatment than from tailings only (control). Another experiment compared the quality of effluent flowing over chemically-fixed (solidified) BaRaSO 4 sediments with that of non-fixed (control) in simulated sedimentation ponds. During seven months the release of 226 Ra to water from chemically-fixed BaRaSO 4 sediments remained 3 for phosphorus removal) was applied to supply 3 percent organic matter in the top 15 cm of the revegetated lysimeters. Undiluted effluent and leachate from chemically-fixed BaRaSO 4 sediments and fresh tailings were 100 percent lethal to Daphnia pulex and rainbow trout (Salmo gairdneri) in static 96-hour bioassay tests. Diluted (50 percent) effluent samples were non-toxic. (auth)

Radon emanation from backfilled mill tailings in underground uranium mine.

Science.gov (United States)

Sahu, Patitapaban; Mishra, Devi Prasad; Panigrahi, Durga Charan; Jha, Vivekananda; Patnaik, R Lokeswara; Sethy, Narendra Kumar

2014-04-01

Coarser mill tailings used as backfill to stabilize the stoped out areas in underground uranium mines is a potential source of radon contamination. This paper presents the quantitative assessment of radon emanation from the backfilled tailings in Jaduguda mine, India using a cylindrical accumulator. Some of the important parameters such as (226)Ra activity concentration, bulk density, bulk porosity, moisture content and radon emanation factor of the tailings affecting radon emanation were determined in the laboratory. The study revealed that the radon emanation rate of the tailings varied in the range of 0.12-7.03 Bq m(-2) s(-1) with geometric mean of 1.01 Bq m(-2) s(-1) and geometric standard deviation of 3.39. An increase in radon emanation rate was noticed up to a moisture saturation of 0.09 in the tailings, after which the emanation rate gradually started declining with saturation due to low diffusion coefficient of radon in the saturated tailings. Radon emanation factor of the tailings varied in the range of 0.08-0.23 with the mean value of 0.21. The emanation factor of the tailings with moisture saturation level over 0.09 was found to be about three times higher than that of the absolutely dry tailings. The empirical relationship obtained between (222)Rn emanation rate and (226)Ra activity concentration of the tailings indicated a significant positive linear correlation (r = 0.95, p < 0.001). This relationship may be useful for quick prediction of radon emanation rate from the backfill material of similar nature. Copyright © 2014 Elsevier Ltd. All rights reserved.

Dam-break studies for mine tailings impoundments

International Nuclear Information System (INIS)

Jeyapalan, J.K.

1982-01-01

This paper describes simple procedures for performing dam-break analyses. Tailings from dam failures usually liquefy and flow for substantial distances as a viscous fluid. The prediction of the possible extent of flow slide movement is illustrated using two case histories. Topics considered include the flow behavior of liquefied talings, dimensionsless numbers for mine tailings and associated flow regimes, laminar flow, and turbulent flow. The potential inundation regions downstream of mine tailings dams are assessed. It is concluded that instances of flow slides of mine waste embankments indicate that the failure of these structures has considerable potential for damage to life and property in many cases

Orphan Stars Found in Long Galaxy Tail

Science.gov (United States)

2007-09-01

Astronomers have found evidence that stars have been forming in a long tail of gas that extends well outside its parent galaxy. This discovery suggests that such "orphan" stars may be much more prevalent than previously thought. The comet-like tail was observed in X-ray light with NASA's Chandra X-ray Observatory and in optical light with the Southern Astrophysical Research (SOAR) telescope in Chile. The feature extends for more than 200,000 light years and was created as gas was stripped from a galaxy called ESO 137-001 that is plunging toward the center of Abell 3627, a giant cluster of galaxies. "This is one of the longest tails like this we have ever seen," said Ming Sun of Michigan State University, who led the study. "And, it turns out that this is a giant wake of creation, not of destruction." Chandra X-ray Image of ESO 137-001 and Tail in Abell 3627 Chandra X-ray Image of ESO 137-001 and Tail in Abell 3627 The observations indicate that the gas in the tail has formed millions of stars. Because the large amounts of gas and dust needed to form stars are typically found only within galaxies, astronomers have previously thought it unlikely that large numbers of stars would form outside a galaxy. "This isn't the first time that stars have been seen to form between galaxies," said team member Megan Donahue, also of MSU. "But the number of stars forming here is unprecedented." The evidence for star formation in this tail includes 29 regions of ionized hydrogen glowing in optical light, thought to be from newly formed stars. These regions are all downstream of the galaxy, located in or near the tail. Two Chandra X-ray sources are near these regions, another indication of star formation activity. The researchers believe the orphan stars formed within the last 10 million years or so. The stars in the tail of this fast-moving galaxy, which is some 220 million light years away, would be much more isolated than the vast majority of stars in galaxies. H-alpha Image of

Remote sensing to monitor uranium tailing sites

International Nuclear Information System (INIS)

1992-02-01

This report concerns the feasibility of using remotely-sensed data for long-term monitoring of uranium tailings. Decommissioning of uranium mine tailings sites may require long-term monitoring to confirm that no unanticipated release of contaminants occurs. Traditional ground-based monitoring of specific criteria of concern would be a significant expense depending on the nature and frequency of the monitoring. The objective of this study was to evaluate whether available remote-sensing data and techniques were applicable to the long-term monitoring of tailings sites. This objective was met by evaluating to what extent the data and techniques could be used to identify and discriminate information useful for monitoring tailings sites. The cost associated with obtaining and interpreting this information was also evaluated. Satellite and aircraft remote-sensing-based activities were evaluated. A monitoring programme based on annual coverage of Landsat Thematic Mapper data is recommended. Immediately prior to and for several years after decommissioning of the tailings sites, airborne multispectral and thermal infrared surveys combined with field verification data are required in order to establish a baseline for the long-term satellite-based monitoring programme. More frequent airborne surveys may be required if rapidly changing phenomena require monitoring. The use of a geographic information system is recommended for the effective storage and manipulation of data accumulated over a number of years

Predicting arsenic concentrations in porewaters of buried uranium mill tailings

Energy Technology Data Exchange (ETDEWEB)

Langmuir, D.; Mahoney, J.; MacDonald, A.; Rowson, J.

1999-10-01

The proposed JEB Tailings Management Facility (TMF) to be emplaced below the groundwater table in northern Saskatchewan, Canada, will contain uranium mill tailings from McClean Lake, Midwest and Cigar Lake ore bodies, which are high in arsenic (up to 10%) and nickel (up to 5%). A serious concern is the possibility that high arsenic and nickel concentrations may be released from the buried tailings, contaminating adjacent groundwaters and a nearby lake. Laboratory tests and geochemical modeling were performed to examine ways to reduce the arsenic and nickel concentrations in TMF porewaters so as to minimize such contamination from tailings buried for 50 years and longer. The tests were designed to mimic conditions in the mill neutralization circuit (3 hr tests at 25 C), and in the TMF after burial (5--49 day aging tests). The aging tests were run at 50, 25 and 4 C (the temperature in the TMF). In order to optimize the removal of arsenic by adsorption and precipitation, ferric sulfate was added to tailings raffinates having Fe/As ratios of less than 3--5. The acid raffinates were then neutralized by addition of slaked lime to nominal pH values of 7, 8, or 9. Analysis and modeling of the test results showed that with slaked lime addition to acid tailings raffinates, relatively amorphous scorodite (ferric arsenate) precipitates near pH 1, and is the dominant form of arsenate in slake limed tailings solids except those high in Ni and As and low in Fe, in which cabrerite-annabergite (Ni, Mg, Fe(II) arsenate) may also precipitate near pH 5--6. In addition to the arsenate precipitates, smaller amounts of arsenate are also adsorbed onto tailings solids. The aging tests showed that after burial of the tailings, arsenic concentrations may increase with time from the breakdown of the arsenate phases (chiefly scorodite). However, the tests indicate that the rate of change decreases and approaches zero after 72 hrs at 25 C, and may equal zero at all times in the TMF at 4 C

Sandia's activities in uranium mill tailings remedial action

International Nuclear Information System (INIS)

Neuhauser, S.

1980-01-01

The Uranium Mill Tailings Radiation Control Act of 1978 requires that remedial action be taken at over 20 inactive uranium mill tailings sites in the United States. Standards promulgated by the EPA under this act are to be the operative standards for this activity. Proposed standards must still undergo internal review, public comment, and receive Nuclear Regulatory Commission concurrence before being finalized. Briefly reviewed, the standards deal separately with new disposal sites (Part A) and cleanup of soil and contaminated structures at existing locations (Part B). In several cases, the present sites are felt to be too close to human habitations or to be otherwise unacceptably located. These tailings will probably be relocated. New disposal sites for relocated tailings must satisfy certain standards. The salient features of these standards are summarized

Genomic organization and splicing variants of a peptidylglycine alpha-hydroxylating monooxygenase from sea anemones

DEFF Research Database (Denmark)

Williamson, M; Hauser, F; Grimmelikhuijzen, C J

2000-01-01

Cnidarians are primitive animals that use neuropeptides as their transmitters. All the numerous cnidarian neuropeptides isolated, so far, have a carboxy-terminal amide group that is essential for their actions. This strongly suggests that alpha-amidating enzymes are essential for the functioning ...

Collagen derived serum markers in carcinoma of the prostate

DEFF Research Database (Denmark)

Rudnicki, M; Jensen, L T; Iversen, P

1995-01-01

Three new collagen markers deriving from the collagenous matrix, e.g. carboxyterminal propeptide of type I procollagen (PICP), carboxy-terminal pyridinoline cross-linked telopeptide of type I collagen (ICTP), and aminoterminal propeptide of type III procollagen (PIIINP) were used for the diagnose...

Genomic structure and cloning of two transcript isoforms of human Sp8.

NARCIS (Netherlands)

M.A. Milona (Maria-athina); J.E. Gough (Julie); A.J. Edgar (Alasdair)

2004-01-01

textabstractBACKGROUND: The Specificity proteins (Sp) are a family of transcription factors that have three highly conserved zinc-fingers located towards the carboxy-terminal that bind GC-boxes and assist in the initiation of gene transcription. Human Sp1-7 genes have been

Mine tailings composition in a historic site: implications for ecological restoration.

Science.gov (United States)

Courtney, R

2013-02-01

Ecological restoration, using tolerant plant species and nutrient additions, is a low-cost option to decrease environmental risks associated with mine tailings. An attempt was previously made to establish such a vegetation cover on an abandoned tailings facility in Southern Ireland. Historically, the tailings site has been prone to dusting and is a potential source of contamination to the surrounding environment. The site was examined to determine the success of the previous restoration plan used to revegetate the site and to determine its suitability for further restoration. Three distinct floristic areas were identified (grassland, poor grassland and bare area) based on herbage compositions and elemental analysis. Surface and subsurface samples were taken to characterise tailings from within these areas of the tailings site. The pH of bare surface tailings (pH, 2.7) was significantly more acidic (p tailings being hostile to plant growth. Total metal concentrations in tailings were high (c. 10,000 mg kg(-1) for Pb and up to 20,000 mg kg(-1) for Zn). DTPA-extractable Zn and Pb were 16 and 11 % of the total amount, respectively. Metal content in grasses growing on some areas of the tailings were elevated and demonstrated the inability of the tailings to support sustainable plant growth. Due to the inherently hostile characteristics of these areas, future restoration work will employ capping with a barrier layer.

Recent advancements in the geotechnical characterization of oil sands tailings

Energy Technology Data Exchange (ETDEWEB)

Sharp, J. [Conetec, Richmond, BC (Canada)

2010-07-01

The technical aspects of soft oil sands tailings in-situ geotechnical site investigations were discussed. Geotechnical studies are conducted to determine containment structure stability as well as to determine volumetric and mass balances. The results of the studies are used in tailings management plans and construction activities. Flow penetrometers, field vane shear tests, and Gamma-CPTu tests are used in in-situ oil sands tailings geotechnical studies in order to determine pore pressure dissipation, and measure shear strength. Ball penetration tests are conducted to determine tailings strength. Methods of interpreting data from the tests were presented, and data from the tests were also compared and evaluated. Recommended procedures for strength screening were presented. Statistical methods for determining tailings behaviour types were outlined. The study showed that Gamma-CPTu data can be used to obtain reasonable preliminary estimates of solids and fines when combined with tailings behaviour type analyses. tabs., figs.

The 3'-terminal 55 nucleotides of bovine coronavirus defective interfering RNA harbor cis-acting elements required for both negative- and positive-strand RNA synthesis.

Directory of Open Access Journals (Sweden)

Wei-Yu Liao

Full Text Available The synthesis of the negative-strand [(--strand] complement of the ∼30 kilobase, positive-strand [(+-strand] coronaviral genome is a necessary early step for genome replication. The identification of cis-acting elements required for (--strand RNA synthesis in coronaviruses, however, has been hampered due to insufficiencies in the techniques used to detect the (--strand RNA species. Here, we employed a method of head-to-tail ligation and real-time quantitative reverse transcription polymerase chain reaction (qRT-PCR to detect and quantitate the synthesis of bovine coronavirus (BCoV defective interfering (DI RNA (- strands. Furthermore, using the aforementioned techniques along with Northern blot assay, we specifically defined the cis-acting RNA elements within the 3'-terminal 55 nucleotides (nts which function in the synthesis of (-- or (+-strand BCoV DI RNA. The major findings are as follows: (i nts from -5 to -39 within the 3'-terminal 55 nts are the cis-acting elements responsible for (--strand BCoV DI RNA synthesis, (ii nts from -3 to -34 within the 3'-terminal 55 nts are cis-acting elements required for (+-strand BCoV DI RNA synthesis, and (iii the nucleotide species at the 3'-most position (-1 is important, but not critical, for both (-- and (+-strand BCoV DI RNA synthesis. These results demonstrate that the 3'-terminal 55 nts in BCoV DI RNA harbor cis-acting RNA elements required for both (-- and (+-strand DI RNA synthesis and extend our knowledge on the mechanisms of coronavirus replication. The method of head-to-tail ligation and qRT-PCR employed in the study may also be applied to identify other cis-acting elements required for (--strand RNA synthesis in coronaviruses.

Uranium mill tailings neutralization: contaminant complexation and tailings leaching studies

International Nuclear Information System (INIS)

Opitz, B.E.; Dodson, M.E.; Serne, R.J.

1985-05-01

Laboratory experiments were performed to compare the effectiveness of limestone (CaCO 3 ) and hydrated lime [Ca(OH) 2 ] for improving waste water quality through the neutralization of acidic uranium mill tailings liquor. The experiments were designed to also assess the effects of three proposed mechanisms - carbonate complexation, elevated pH, and colloidal particle adsorption - on the solubility of toxic contaminants found in a typical uranium mill waste solution. Of special interest were the effects each of these possible mechanisms had on the solution concentrations of trace metals such as Cd, Co, Mo, Zn, and U after neutralization. Results indicated that the neutralization of acidic tailings to a pH of 7.3 using hydrated lime provided the highest overall waste water quality. Both the presence of a carbonate source or elevating solution pH beyond pH = 7.3 resulted in a lowering of previously achieved water quality, while adsorption of contaminants onto colloidal particles was not found to affect the solution concentration of any constituent investigated. 24 refs., 8 figs., 19 tabs

Modelling of contaminant release from a uranium mine tailings site

International Nuclear Information System (INIS)

Kahnt, Rene; Metschies, Thomas

2007-01-01

Available in abstract form only. Full text of publication follows: Uranium mining and milling continuing from the early 1960's until 1990 close to the town of Seelingstaedt in Eastern Germany resulted in 4 tailings impoundments with a total tailings volume of about 105 Mio. m 3 . Leakage from these tailings impoundments enters the underlying aquifers and is discharged into surface water streams. High concentration of salts, uranium and several heavy metals are released from the tailings. At present the tailings impoundments are reshaped and covered. For the identification of suitable remediation options predictions of the contaminant release for different remediation scenarios have to be made. A compartment model representing the tailings impoundments and the surrounding aquifers for the calculation of contaminant release and transport was set up using the software GOLDSIM. This compartment model describes the time dependent hydraulic conditions within the tailings and the surrounding aquifers taking into account hydraulic and geotechnical processes influencing the hydraulic properties of the tailings material. A simple geochemical approach taking into account sorption processes as well as retardation by applying a k d -approach was implemented to describe the contaminant release and transport within the hydraulic system. For uranium as the relevant contaminant the simple approach takes into account additional geochemical conditions influencing the mobility. Alternatively the model approach allows to include the results of detailed geochemical modelling of the individual tailings zones which is than used as source term for the modelling of the contaminant transport in the aquifer and to the receiving streams. (authors)

Oil sands tailings treatment via surface modification of solids with polymers

Energy Technology Data Exchange (ETDEWEB)

Soane, D.; Ware, W.; Mahoney, R.; Kincaid, K. [Soane Energy, Cambridge, MA (United States)

2010-07-01

Oil sands fine tailings require large containment area and long-term storage. A recent directive has been established to reduce fluid tailings storage by 30 percent by 2012. This PowerPoint presentation described a method of treating oil sands tailings by modifying the surfaces of solids with polymers. The ATA process divided whole tailings into fines and coarse streams. The coarse stream was used to prepare anchor particles with a monolayer of tether polymers. An activator was added to the fine tailings in order to aggregate. The process cause a Velcro-like attraction between the activated fines and the tether-coated anchor particles. The solid ATA matrix trapped the fines and allowed water to drain more easily. Photographs of the process were provided. An analysis of the process demonstrated that 70 percent of the water in the tailings was recovered in less than 5 minutes. The water was clear, with less than 0.2 percent of suspended solids. The process is applicable to live tailings and mature fine tailings (MFT). tabs., figs.

Influence of uranium mill tailings on tree growth at Elliot Lake

International Nuclear Information System (INIS)

Murray, D.R.

1978-01-01

A four-year study was carried out to determine the ability of coniferous trees to aid in the reclamation of uranium tailings at Elliot Lake. Five species were planted: white cedar, white spruce, jack pine, scotch pine and red pine. More than 570 bare-root, two-year-old seedlings were planted on bare tailings and in areas of established grasses. A further division was made between areas of coarse and fine tailings. Over-all survival and growth of the trees has been far below expectations based on previous experience with several varieties of grasses. The criteria for assessment have been per cent survival and yearly growth as determined by plant height. Pine was superior, with 68% survival when planted in bare coarse tailings, 45% for vegetated coarse tailings and 34% for vegetated fine tailings. Cedar had the worst survival rates at 49%, 14% and 7% respectively. No species survived on bare fine tailings. The survival and growth of the coniferous trees have been related to species, environmental conditions and tailings properties. (author)

Influence of uranium mill tailings on tree growth at Elliot Lake

International Nuclear Information System (INIS)

Murray, D.R.

1978-01-01

A four year study was carried out to determine the ability of coniferous trees to aid in the reclamation of uranium tailings at Elliot Lake. Five species were planted: white cedar, white spruce, jack pine, scotch pine and red pine. More than 570 bare-root, two-year-old seedlings were planted on bare tailings and in areas of established grasses. A further division was made between areas of coarse and fine tailings. Over-all survival and growth of the trees has been far below expectations based on previous experience with several varieties of grasses. The crieteria for assessment have been per cent survival and yearly growth as determined by plant height. Pine was superior, with 68% survival when planted in bare coarse tailings, 45% for vegetated coarse tailings and 34% for vegetated fine tailings. Cedar had the worst survival rates at 49%, 14% and 7% respectively. No species survived on bare fine tailings. The survival and growth of the coniferous trees have been related to species, environmental conditions and tailings properties. (auth)

Identification of poorly crystalline scorodite in uranium mill tailings

International Nuclear Information System (INIS)

Frey, R.; Rowson, J.; Hughes, K.; Rinas, C.; Warner, J.

2010-01-01

The McClean Lake mill, located in northern Saskatchewan, processes a variety of uranium ore bodies to produce yellowcake. A by-product of this process is an acidic waste solution enriched in arsenic, referred to as raffinate. The raffinate waste stream is treated in the tailings preparation circuit, where arsenic is precipitated as a poorly crystalline scorodite phase. Raffinate neutralization studies have successfully identified poorly crystalline scorodite using XRD, SEM, EM, XANES and EXAFS methods, but to date, scorodite has not been successfully identified within the whole tailing solids. During the summer of 2008, a drilling program sampled the in situ tailings within the McClean Lake tailings management facility. Samples from this drilling campaign were sent to the Canadian Light Source Inc. for EXAFS analysis. The sample spectra positively identify a poorly crystalline scorodite phase within the McClean tailings management facility. (author)

The Rum Jungle tailings dam - chemical profile of the subsoil

International Nuclear Information System (INIS)

Lowson, R.T.; Evans, J.V.; Sarbutt, J.V.; Sinclair, G.; Folk, E.

1987-09-01

In a survey of soils below the Rum Jungle uranium mine tailings dam, parameters measured were pH, moisture content, particle distribution, total Cu, water-extractable Cu, Ca and SO 4 and acid-extractable Ra. The cation profile had a marked discontinuity at the soil/tailings interface. This was attributed to a complex hydrogeology and to the presence of a reduction zone in the soil immediately below the tailings. The tailings acted as an aquaclude to a water table which fluctuated with the monsoonal season. The reduction zone acted as a cation trap, preventing cation transport. The radium concentration dropped to levels acceptable to public health within a few centimetres of the soil/tailings interface

Radionuclide levels in vegetation growing on uranium tailings, Elliot Lake, Ontario

International Nuclear Information System (INIS)

Pave, N.K.; Cloutier, N.R.; Lim, T.P.

1985-01-01

In Elliot Lake, Ontario, Canada, most of the inactive uranium tailings have been reclaimed by revegetation where a thick vegetation cover has been established. The surface amendments have also prompted volunteer growth of various species of local trees and shrubs on tailings. Radionuclide levels were measured in various tissues of grasses, legumes and trees growing on uranium tailings at different sites. Lower Th than Ra and Pb levels in tailings substrate were believed to be the cause for the relatively lower Th levels measured in vegetation when compared to Ra and Pb concentrations. No correlation was observed between the level of a given radionuclide in tailings and in the vegetation growing on that tailings

Can tail damage outbreaks in the pig be predicted by behavioural change?

Science.gov (United States)

Larsen, Mona Lilian Vestbjerg; Andersen, Heidi Mai-Lis; Pedersen, Lene Juul

2016-03-01

Tail biting, resulting in outbreaks of tail damage in pigs, is a multifactorial welfare and economic problem which is usually partly prevented through tail docking. According to European Union legislation, tail docking is not allowed on a routine basis; thus there is a need for alternative preventive methods. One strategy is the surveillance of the pigs' behaviour for known preceding indicators of tail damage, which makes it possible to predict a tail damage outbreak and prevent it in proper time. This review discusses the existing literature on behavioural changes observed prior to a tail damage outbreak. Behaviours found to change prior to an outbreak include increased activity level, increased performance of enrichment object manipulation, and a changed proportion of tail posture with more tails between the legs. Monitoring these types of behaviours is also discussed for the purpose of developing an automatic warning system for tail damage outbreaks, with activity level showing promising results for being monitored automatically. Encouraging results have been found so far for the development of an automatic warning system; however, there is a need for further investigation and development, starting with the description of the temporal development of the predictive behaviour in relation to tail damage outbreaks. Copyright © 2016 Elsevier Ltd. All rights reserved.

Reactivity of the isolated perfused rat tail vascular bed

Directory of Open Access Journals (Sweden)

A.S. França

1997-07-01

Full Text Available Isolated segments of the perfused rat tail artery display a high basal tone when compared to other isolated arteries such as the mesenteric and are suitable for the assay of vasopressor agents. However, the perfusion of this artery in the entire tail has not yet been used for functional studies. The main purpose of the present study was to identify some aspects of the vascular reactivity of the rat tail vascular bed and validate this method to measure vascular reactivity. The tail severed from the body was perfused with Krebs solution containing different Ca2+ concentrations at different flow rates. Rats were anesthetized with sodium pentobarbital (65 mg/kg and heparinized (500 U. The tail artery was dissected near the tail insertion, cannulated and perfused with Krebs solution plus 30 µM EDTA at 36oC and 2.5 ml/min and the procedures were started after equilibration of the perfusion pressure. In the first group a dose-response curve to phenylephrine (PE (0.5, 1, 2 and 5 µg, bolus injection was obtained at different flow rates (1.5, 2.5 and 3.5 ml/min. The mean perfusion pressure increased with flow as well as PE vasopressor responses. In a second group the flow was changed (1.5, 2, 2.5, 3 and 3.5 ml/min at different Ca2+ concentrations (0.62, 1.25, 2.5 and 3.75 mM in the Krebs solution. Increasing Ca2+ concentrations did not alter the flow-pressure relationship. In the third group a similar protocol was performed but the rat tail vascular bed was perfused with Krebs solution containing PE (0.1 µg/ml. There was an enhancement of the effect of PE with increasing external Ca2+ and flow. PE vasopressor responses increased after endothelial damage with air and CHAPS, suggesting an endothelial modulation of the tone of the rat tail vascular bed. These experiments validate the perfusion of the rat tail vascular bed as a method to investigate vascular reactivity

Application of tailings flow analyses to field conditions

International Nuclear Information System (INIS)

Bryant, S.M.

1983-01-01

Catastrophic failures of tailings impoundments, in which liquefied tailings flow over substantial distances, pose severe hazards to the health and safety of people in downstream areas, and have a potential for economic and environmental devastation. The purpose of this study, an extension of prior investigations, was to develop procedures to measure Bingham flow parameters for mine tailings. In addition, the analytical procedures developed by Lucia (1981) and Jeyapalan (1980) for predicting the consequences of tailings flow failures were evaluated and applied to the Tenmile Tailings Pond at Climax, Colorado. Revisions in the simplified equilibrium procedure, developed by Lucia (1981), make it more compatible with infinite slope solutions. Jeyapalan's model was evaluated using a simple rheological analogy, and it appears there are some numerical difficulties with the operation of the computer program TFLOW used to model the displacements and velocities of flow slides. Comparable flow distances can be determined using either model if the flow volume used in the simplified equilibrium procedure is estimated properly. When both analytical procedures were applied to the Tenmile Pond, it was concluded there was no potential for a flow slide at the site

Liner evaluation for uranium mill tailings. Final report

International Nuclear Information System (INIS)

Buelt, J.L.

1983-09-01

The Liner Evaluation for Uranium Mill Tailings Program was conducted to evaluate the need for and performance of prospective lining materials for the long-term management of inactive uranium mill tailings piles. On the basis of program results, two materials have been identified: natural foundation soil amended with 10% sodium bentonite; catalytic airblown asphalt membrane. The study showed that, for most situations, calcareous soils typical of Western US sites adequately buffer tailings leachates and prevent groundwater contamination without additional liner materials or amendments. Although mathematical modeling of disposal sites is recommended on a site-specific basis, there appears to be no reason to expect significant infiltration through the cover for most Western sites. The major water source through the tailings would be groundwater movement at sites with shallow groundwater tables. Even so column leaching studies showed that contaminant source terms were reduced to near maximum contaminant levels (MCL's) for drinking water within one or two pore volumes; thus, a limited source term for groundwater contamination exists. At sites where significant groundwater movement or infiltration is expected and the tailings leachates are alkaline, however, the sodium bentonite or asphalt membrane may be necessary

Ezrin interacts with the SARS coronavirus Spike protein and restrains infection at the entry stage.

Directory of Open Access Journals (Sweden)

Jean Kaoru Millet

Full Text Available BACKGROUND: Entry of Severe Acute Respiratory Syndrome coronavirus (SARS-CoV and its envelope fusion with host cell membrane are controlled by a series of complex molecular mechanisms, largely dependent on the viral envelope glycoprotein Spike (S. There are still many unknowns on the implication of cellular factors that regulate the entry process. METHODOLOGY/PRINCIPAL FINDINGS: We performed a yeast two-hybrid screen using as bait the carboxy-terminal endodomain of S, which faces the cytosol during and after opening of the fusion pore at early stages of the virus life cycle. Here we show that the ezrin membrane-actin linker interacts with S endodomain through the F1 lobe of its FERM domain and that both the eight carboxy-terminal amino-acids and a membrane-proximal cysteine cluster of S endodomain are important for this interaction in vitro. Interestingly, we found that ezrin is present at the site of entry of S-pseudotyped lentiviral particles in Vero E6 cells. Targeting ezrin function by small interfering RNA increased S-mediated entry of pseudotyped particles in epithelial cells. Furthermore, deletion of the eight carboxy-terminal amino acids of S enhanced S-pseudotyped particles infection. Expression of the ezrin dominant negative FERM domain enhanced cell susceptibility to infection by SARS-CoV and S-pseudotyped particles and potentiated S-dependent membrane fusion. CONCLUSIONS/SIGNIFICANCE: Ezrin interacts with SARS-CoV S endodomain and limits virus entry and fusion. Our data present a novel mechanism involving a cellular factor in the regulation of S-dependent early events of infection.

Hormonogenic donor Tyr2522 of bovine thyroglobulin. Insight into preferential T3 formation at thyroglobulin carboxyl terminus at low iodination level

Energy Technology Data Exchange (ETDEWEB)

Cetrangolo, Giovanni Paolo, E-mail: giovanni.cetrangolo@unimol.it [Dipartimento di Medicina e Scienze della Salute, Università del Molise, Via De Sanctis, snc, Campobasso 86100 (Italy); Arcaro, Alessia, E-mail: alessia.arcaro@unimol.it [Dipartimento di Medicina e Scienze della Salute, Università del Molise, Via De Sanctis, snc, Campobasso 86100 (Italy); Lepore, Alessio, E-mail: alessiolepore@alice.it [Dipartimento di Medicina Molecolare e Biotecnologie Mediche, Università di Napoli Federico II, Via S. Pansini, 5, Napoli 80131 (Italy); Graf, Maria, E-mail: mariagraf@tiscali.it [Dipartimento di Medicina Molecolare e Biotecnologie Mediche, Università di Napoli Federico II, Via S. Pansini, 5, Napoli 80131 (Italy); Mamone, Gianfranco, E-mail: mamone@isa.cnr.it [Centro di Spettrometria di Massa Proteomica e Biomolecolare, ISA-CNR, Via Roma 52 a, Avellino 83100 (Italy); Ferranti, Pasquale, E-mail: ferranti@unina.it [Dipartimento di Agraria, Università di Napoli “Federico II”, Parco Gussone, Portici (Napoli) 80055 (Italy); Palumbo, Giuseppe, E-mail: palumbo@unina.it [Dipartimento di Medicina Molecolare e Biotecnologie Mediche, Università di Napoli Federico II, Via S. Pansini, 5, Napoli 80131 (Italy); Gentile, Fabrizio, E-mail: gentilefabrizio@unimol.it [Dipartimento di Medicina e Scienze della Salute, Università del Molise, Via De Sanctis, snc, Campobasso 86100 (Italy)

2014-07-18

Highlights: • A carboxy-terminal fragment (residues 2515–2750) was isolated from a low-iodine bTg. • Post-translational status of 8 tyrosines in bTg region 2515–2750 was assessed by MS. • Tyr2522 of bovine Tg is an interspecifically conserved hormonogenic donor site. • Propensities of Tyr residues to mono or diiodination optimize T3 yield from Tyr2748. - Abstract: A tryptic fragment (b5{sub TR,NR}), encompassing residues 2515–2750, was isolated from a low-iodine (0.26% by mass) bovine thyroglobulin, by limited proteolysis with trypsin and preparative, continuous-elution SDS–PAGE. The fragment was digested with Asp-N endoproteinase and analyzed by reverse-phase HPLC electrospray ionization quadrupole time-of-flight mass spectrometry, revealing the formation of: 3-monoiodotyrosine and dehydroalanine from Tyr2522; 3-monoiodotyrosine from Tyr2555 and Tyr2569; 3-monoiodotyrosine and 3,5-diiodotyrosine from Tyr2748. The data presented document, by direct mass spectrometric identifications, efficient iodophenoxyl ring transfer from monoiodinated hormonogenic donor Tyr2522 and efficient mono- and diiodination of hormonogenic acceptor Tyr2748, under conditions which permitted only limited iodination of Tyr2555 and Tyr2569, in low-iodine bovine thyroglobulin. The present study thereby provides: (1) a rationale for the preferential synthesis of T3 at the carboxy-terminal end of thyroglobulin, at low iodination level; (2) confirmation for the presence of an interspecifically conserved hormonogenic donor site in the carboxy-terminal domain of thyroglobulin; (3) solution for a previous uncertainty, concerning the precise location of such donor site in bovine thyroglobulin.

Hormonogenic donor Tyr2522 of bovine thyroglobulin. Insight into preferential T3 formation at thyroglobulin carboxyl terminus at low iodination level

International Nuclear Information System (INIS)

Cetrangolo, Giovanni Paolo; Arcaro, Alessia; Lepore, Alessio; Graf, Maria; Mamone, Gianfranco; Ferranti, Pasquale; Palumbo, Giuseppe; Gentile, Fabrizio

2014-01-01

Highlights: • A carboxy-terminal fragment (residues 2515–2750) was isolated from a low-iodine bTg. • Post-translational status of 8 tyrosines in bTg region 2515–2750 was assessed by MS. • Tyr2522 of bovine Tg is an interspecifically conserved hormonogenic donor site. • Propensities of Tyr residues to mono or diiodination optimize T3 yield from Tyr2748. - Abstract: A tryptic fragment (b5 TR,NR ), encompassing residues 2515–2750, was isolated from a low-iodine (0.26% by mass) bovine thyroglobulin, by limited proteolysis with trypsin and preparative, continuous-elution SDS–PAGE. The fragment was digested with Asp-N endoproteinase and analyzed by reverse-phase HPLC electrospray ionization quadrupole time-of-flight mass spectrometry, revealing the formation of: 3-monoiodotyrosine and dehydroalanine from Tyr2522; 3-monoiodotyrosine from Tyr2555 and Tyr2569; 3-monoiodotyrosine and 3,5-diiodotyrosine from Tyr2748. The data presented document, by direct mass spectrometric identifications, efficient iodophenoxyl ring transfer from monoiodinated hormonogenic donor Tyr2522 and efficient mono- and diiodination of hormonogenic acceptor Tyr2748, under conditions which permitted only limited iodination of Tyr2555 and Tyr2569, in low-iodine bovine thyroglobulin. The present study thereby provides: (1) a rationale for the preferential synthesis of T3 at the carboxy-terminal end of thyroglobulin, at low iodination level; (2) confirmation for the presence of an interspecifically conserved hormonogenic donor site in the carboxy-terminal domain of thyroglobulin; (3) solution for a previous uncertainty, concerning the precise location of such donor site in bovine thyroglobulin

Protection coverage parameters indentification for uranium tailing dumps

International Nuclear Information System (INIS)

Khakimov, N.; Nazarov, Kh.M.; Mirsaidov, I.U.; Akhmedov, M.Z.

2012-01-01

This article is devoted to protection coverage parameters indentification for uranium tailing dumps. Authors noticed that many tailing dumps In Tajikistan do not correspond to modern requirements of territories remediation published by IAEA and current norms of the Republic of Tajikistan. The most dangerous is radionuclide migration i.e., distribution of radioactive substances beyond the uranium tailing dumps territories. One of the basic distribution ways is atmospheric migration. At the same time potentially dangerous factors are: dust rising from open surfaces is the source for contamination distribution to neighboring territories; direct external exposure of public located in close distance to the sites; radioactive gas radon exhalation originating a threat if radionuclides penetration to the human body through breathing passages. Different methods of tailing's negative impact minimization, including coverage with neutral soil layer, coverage with fine-ground worked-out bentonite clay were proposed.

Costs associated with tail autotomy in an ambush foraging lizard ...

African Journals Online (AJOL)

We induced tail autotomy in free ranging male Cordylus m. melanotus and measured potential shifts in behaviour (movements, foraging behaviour, time exposed and average distance to a potential refuge), and responses to an approaching human compared to marked individuals with complete tails. Tailed and tailless ...

Estimation of bitumen and clay content in fine tailings

International Nuclear Information System (INIS)

Motta Cabrera, S.C.; Bryan, J.; Kantzas, A.

2007-01-01

Fine tailings are the components of tailings ponds and the by-product of the oil sand extraction process, consisting mostly of water with small amounts of bitumen, sand, silts and clays. Because of the large volumes of tailings, an important environmental and production process issue involves the reduction of the remaining bitumen in the tailings stream. This paper presented the results of a study that used low field nuclear magnetic resonance (NMR) in order to estimate the bitumen, clay and water content of synthetic tailings samples. NMR is a non-destructive technique that is utilized to determine compositions of oil and brine emulsions and the viscosity of heavy oil and bitumen as well as in reservoir characterization, measuring properties such as permeability, porosity, mobile and immobile fluids, and fluid saturations. The study prepared and tested numerous samples with variable water, bitumen, sand and clay concentrations in the NMR tool under ambient conditions. Two qualities of water and bitumen were used to prepare the synthetic samples. Each type of water and bitumen was analyzed as a single substance and in a mixture with the typical solids found in tailings composition. These included kaolinite, illite, sodium montmorillonite and sand. These synthetic samples were analyzed using different mixing configurations, as a function of time and in two different NMR tools. It was concluded that NMR is a potential application for on-line determination of tailings streams composition. 18 refs., 3 tabs., 17 figs

Uranium mill tailings storage, use, and disposal problems

International Nuclear Information System (INIS)

Hendricks, D.W.

1977-01-01

Solid and liquid residues (tailings) containing substantial quantities of naturally occurring radionuclides are produced and stored at all US uranium mill sites. These radioactive wastes are a potential health hazard with the degree of hazard depending largely on the tailings management practices at the individual sites. The principal pathways of potential radiation exposure to man are discussed. A description is presented of some past and current tailings storage practices together with a description of some of the possible problems associated with various stabilization and disposal options. 16 figures

[Assessment of anti-tremorogenic drugs--nicotine-induced tail-tremor model].

Science.gov (United States)

Suemaru, K; Kawasaki, H; Gomita, Y

1997-06-01

The repeated administration of nicotine at small doses, which do not produce whole body tremor or convulsion, causes tremor only in the tail (tail-tremor) of rats. The tremor is accompanied by locomotor hyperactivity without rigidity and immobility of the whole body, suggesting that the nicotine-induced tail-tremor model is useful for studying the mechanism underlying tremor associated with movement. The tail-tremor induced by nicotine was suppressed by mecamylamine, a nicotinic antagonist, but not by atropine or scopolamine, muscalinic antagonists. Moreover, the tail-tremor was suppressed by the beta-blockers propranolol and pindolol, as well as the benzodiazepines diazepam and clonazepam. Tremor at rest is observed only in Parkinson's disease, which is improved with anti-muscalinic drugs. Essential tremor is one of the typical tremors connected with movement (postural and kinetic tremor) and is improved with beta-blocker. These findings and results suggest that nicotine-induced tail-tremor is useful for the study of essential tremor in animal models.

Electrodialytic remediation of suspended mine tailings

DEFF Research Database (Denmark)

Hansen, Henrik K.; Rojo, Adrian; Pino, Denisse

2008-01-01

This work shows the laboratory results of nine electrodialytic remediation experiments on copper mine tailings. A newly designed remediation cell, where the solids were kept in suspension by airflow, was tested. The results show that electric current could remove copper from suspended tailings...... efficiency from 1% to 80% compared to experiments with no stirring but with the same operational conditions. This showed the crucial importance of having the solids in suspension and not settled during the remediation....

Managing 'tail liability'.

Science.gov (United States)

Frese, Richard C; Weber, Ryan J

2013-11-01

To reduce and control their level of tail liability, hospitals should: Utilize a self-insurance vehicle; Consider combined limits between the hospital and physicians; Communicate any program changes to the actuary, underwriter, and auditor; Continue risk management and safety practices; Ensure credit is given to the organization's own medical malpractice program.

A review on in situ phytoremediation of mine tailings.

Science.gov (United States)

Wang, Li; Ji, Bin; Hu, Yuehua; Liu, Runqing; Sun, Wei

2017-10-01

Mine tailings are detrimental to natural plant growth due to their physicochemical characteristics, such as high pH, high salinity, low water retention capacity, high heavy metal concentrations, and deficiencies in soil organic matter and fertility. Thus, the remediation of mine tailings has become a key issue in environmental science and engineering. Phytoremediation, an in situ cost-effective technology, is emerging as the most promising remediation method for mine tailings by introducing tolerant plant species. It is particularly effective in dealing with large-area mine tailings with shallow contamination of organic, nutrient and metal pollutants. In this review, the background, concepts and applications of phytoremediation are comprehensively discussed. Furthermore, proper amendments used to improve the physical, chemical and biological properties of mine tailings are systematically reviewed and compared. Emphasis is placed on the types and characteristics of tolerant plants and their role in phytoremediation. Moreover, the role of microorganisms and their mechanism in phytoremediation are also discussed in-depth. Copyright © 2017 Elsevier Ltd. All rights reserved.

Reclamation plans at uranium mill tailings sites

International Nuclear Information System (INIS)

Abt, S.R.; Nelson, J.D.

1990-01-01

Long-term stability of waste impoundments is of concern because of the long time periods over which various types of waste may remain active. Over the past decade much technology has been developed specifically for reclamation of uranium mill tailings impoundments. Aspects of this technology will be discussed here and is presented as also being directly applicable to reclamation of industrial waste impoundments in general. The paper discusses Title I and Title II sites which represent two different generations in uranium tailings impoundment construction. The comparison between the two represent differences in philosophies as well as in impoundment type. Reclamation of uranium mill tailings impoundments in the U.S. is controlled by Federal legislation, which has set forth the regulatory framework for reclamation plan approval. Title I requirements govern government owned inactive sites and Title II requirements govern active tailings impoundments or those operated by private industries. While the Title I and Title II designation may result in a slightly different regulatory process, reclamation of uranium tailings sites has the same. Differences between Title I and Title II reclamation plans to achieve surface stability relate primarily to the embankment and surface covers. The differences in the cover designs result from site-specific conditions, rather than from differences in engineering approaches or the regulatory process. This paper discusses the site-specific conditions that affect the selection of cover designs, and provides a comparative example to illustrate the effect of this condition

Recent hydrological observations from the Riverton and Maybell tailings piles

International Nuclear Information System (INIS)

Tokunaga, T.; Narasimhan, T.N.

1982-01-01

This paper reports on field and laboratory hydrologic studies of two inactive uranium mill tailings piles under the Uranium Mill Tailings Remedial Action Program (UMTRA). The ultimate goal of the studies is to evaluate the nature of the contaminant potential of the piles with sufficient detail so that appropriate remedial measures can be designed and implemented under the UMTRA Program. The field studies included the monitoring of hydraulic head profiles of the piles and infiltration tests. Both the field and laboratory results from the Riverton tailings indicate a great deal of spatial variability in hydraulic properties. It is determined that the bulk of the precipitation input at the Riverton tailings is lost by evapotranspiration within the upper meter of soil cover and tailings

(2S,4aR,6aR,7R,9S,10aS,10bR-7-Carboxy-2-(3-furyl-6a,10b-dimethyl-4,10-dioxoperhydrobenzo[f]isochromen-9-yl acetate

Directory of Open Access Journals (Sweden)

2009-03-01

Full Text Available The asymmetric unit of the title compound, C22H26O8, contains two crystallographically independent molecules with closely comparable conformations (r.m.s. overlay = 0.54 Å for 30 non-H atoms. All six-membered rings display chair conformations, with a slight distortion for the lactone ring. The molecules are connected by O—H...O hydrogen bonds into chains along [010], with the independent molecules segregated into separate chains. The two molecules in the asymmetric unit face each other in a head-to-tail fashion, with the furan ring of one molecule turned towards the carboxylic acid terminal of the other molecule.

Radium and heavy metal transport beneath an abandoned uranium tailings dam

International Nuclear Information System (INIS)

Jeffery, J.J.; Sinclair, G.; Lowson, R.T.

1988-09-01

An abandoned uranium tailings dam at Moline in the Northern Territory of Australia was the site of a study to assess the movement of potentially toxic elements from tailings into subsoil. The tailings at Moline were first laid down in 1959 and have since been leached by prevailing rainfall. Sixteen sampling sites were selected to give a good representation of the dam. At each site, a trench was excavated through the tailings and into the subsoil, then samples of subsoil were taken at 10 cm intervals down to a depth of 50 cm. A sample of the tailings overlying the tailings-subsoil interface was also taken. Samples were analysed for radium, uranium, copper, zinc, and lead. At most sites there was only minor accumulation of these elements in the 0-10 cm subsoil layer immediately below the interface, with concentrations typically one or two orders of magnitude less than the concentrations in overlying tailings. Below 10 cm, the concentrations were typically at or close to background concentrations

Tailings technology. Decommissioning and rehabilitation remedial action technology development

International Nuclear Information System (INIS)

Ramsey, R.W. Jr.

1982-01-01

This paper is to provide an overview of technology requirements for long-term uranium mill tailings disposal and remedial actions for existing tailings to ensure their adequate disposal. The paper examines the scientific disciplines that are the basis for the technology of uranium mill tailings stabilization and the design of barriers to control radiological exposure or environmental degradation at the location of tailings disposal. The discussion is presented as a hypothetical course of instruction at a fictitious university. Features of six mechanisms of dispersal or intrusion are examined with brief discussion of the applicable technology development for each. The paper serves as an introduction to subsequent specific technology development papers in the session. (author)

Long-term ecological behaviour of abandoned uranium mill tailings

International Nuclear Information System (INIS)

Kalin, Margarete

1984-12-01

Semi-aquatic and terrestrial areas on abandoned or inactive uranium mill tailings in Ontario were studied in order to identify the growth characteristics of the naturally invading species dominating these areas. Semi-aquatic areas of tailings sites have been invaded by cattails. These species formed wetland communities which varied in size, but all were essentially monocultures of Typha latifolia, T. angustifolia, or of the hybrids T. glauca. Sedges, Scripus cyperinus (wool-grass) and Phragmites australis (reed-grass), were found in transition zones between the cattail stand and the dry section of the tailings site. The expansion of the cattail stands appeared to be controlled by the hydrological conditions on the site, rather than the chemical characteristics of the tailings

Kelvin-Helmholtz instability in type-1 comet tails and associated phenomena

International Nuclear Information System (INIS)

Ershkovich, A.I.

1980-01-01

Selected problems of the solar wind - comet tail coupling that are currently accessible to quantitative analysis are reviewed. The model of a comet tail as a plasma cylinder separated by a tangential discontinuity surface from the solar wind is discussed in detail. This model is compatible with the well-known Alfven mechanism of formation of the comet tail. The stability problem of the comet tail boundary (considered as a discontinuity surface) is solved. Under typical conditions a comet tail boundary can undergo the Kelvin-Helmholtz instability. With finite amplitude the stabilizing effect of the magnetic field increases, and waves become stabilized. This model supplies a detailed quantitative description of helical waves observed in type-1 comet tails. A more general model of the tail boundary as a transition layer with a continuous change of the plasma parameters within it is also considered. This theory, in principle, enables us to solve one of the fundamental problems of cometary physics: the magnetic field of the comet tail can be derived from the observations of helical waves. This field turns out to be of the order of the interplanetary field. Various other considerations, discussed in this review also support this conclusion. (orig.)

Modulation of 5' splice site selection using tailed oligonucleotides carrying splicing signals

Directory of Open Access Journals (Sweden)

Elela Sherif

2006-01-01

Full Text Available Abstract Background We previously described the use of tailed oligonucleotides as a means of reprogramming alternative pre-mRNA splicing in vitro and in vivo. The tailed oligonucleotides that were used interfere with splicing because they contain a portion complementary to sequences immediately upstream of the target 5' splice site combined with a non-hybridizing 5' tail carrying binding sites for the hnRNP A1/A2 proteins. In the present study, we have tested the inhibitory activity of RNA oligonucleotides carrying different tail structures. Results We show that an oligonucleotide with a 5' tail containing the human β-globin branch site sequence inhibits the use of the 5' splice site of Bcl-xL, albeit less efficiently than a tail containing binding sites for the hnRNP A1/A2 proteins. A branch site-containing tail positioned at the 3' end of the oligonucleotide also elicited splicing inhibition but not as efficiently as a 5' tail. The interfering activity of a 3' tail was improved by adding a 5' splice site sequence next to the branch site sequence. A 3' tail carrying a Y-shaped branch structure promoted similar splicing interference. The inclusion of branch site or 5' splice site sequences in the Y-shaped 3' tail further improved splicing inhibition. Conclusion Our in vitro results indicate that a variety of tail architectures can be used to elicit splicing interference at low nanomolar concentrations, thereby broadening the scope and the potential impact of this antisense technology.

Tetrel, Chalcogen, and Charge-Assisted Hydrogen Bonds in 2-((2-Carboxy-1-(substituted-2-hydroxyethylthio Pyridin-1-ium Chlorides

Directory of Open Access Journals (Sweden)

Firudin I. Guseinov

2017-10-01

Full Text Available Reaction of 2-chloro-2-(diethoxymethyl-3-substitutedoxirane or 1-chloro-1-(substituted -3,3-diethoxypropan-2-one with pyridine-2-thiol in EtOH at 25 °C yields 3-(diethoxymethyl-3-hydroxy-2-substituted-2,3-dihydrothiazolo[3,2-a]pyridin-4-ium chlorides, which subsequently, in MeCN at 85°C, transforms into ring-opening products, 2-((2-carboxy-1-(substituted -2-hydroxyethylthiopyridin-1-ium chlorides. The tetrel (C···O and chalcogen (S···O bonds are found in the structures of 5 and 6, respectively. Compound 6 is also present in halogen bonding with a short O···Cl distance (3.067 Å. Both molecules are stabilized in crystal by tetrel, chalcogen, and multiple charge-assisted hydrogen bonds.

Fat-tailed sheep in Indonesia; an essential resource for smallholders.

Science.gov (United States)

Udo, Henk Mathijs Johannes; Budisatria, I Gede Suparta

2011-10-01

This paper discusses the historical development of fat-tailed sheep in Indonesia, the dynamics of production systems, production and reproduction performances under farmers' conditions, and roles of sheep in livelihoods. In the eighteenth and nineteenth century, fat-tailed sheep from southwest Asia and Africander sheep from South Africa were introduced. Crossing of fat-tailed sheep with the local thin-tailed sheep produced the Javanese fat-tailed sheep. Main motives for the gradual change-over to fat-tailed sheep have been their potential larger body size and the preference of consumers for their meat. Management systems are changing in response to the intensification of land use. The reproductive performances of fat-tailed sheep are good. Households keep four to six animals, housed close to the family quarters. This results in very high levels of faecal bacteria contamination of drinking water sources. Sheep provide a small income, manure, security and help to accumulate capital. Sheep also play a key role in religious festivities. Farmers hardly profit from the increased demand for the feast of sacrifice; animals are sold mainly when the owners have urgent cash needs. Systematic sheep fattening can contribute to higher economic results, if sufficient family labour and crop residues are available.

Dewatering tailings impoundments : interior drains

International Nuclear Information System (INIS)

Charlie, W.A.; Doehring, D.O.; Durnford, D.S.

1984-01-01

For the design of a new uranium tailings impoundment in the western United States, it was proposed that an interior drainage system be considered to economically and reliably minimize potential short- and long-term environmental impacts. The objectives were to decrease the effective hydraulic head on the clay liner, to dewater and stabilize the tailings, and to increase the amount of water recycled to the mill. In addition, desaturation of the impoundment would induce capillary pressure (negative porewater pressure), further reducing the potential movement of dissolved pollutants. This paper presents saturated and unsaturated seepage principles and reviews the concept, criteria and design of the various interior drainage systems considered

Computer simulations of long-time tails: what's new?

NARCIS (Netherlands)

Hoef, van der M.A.; Frenkel, D.

1995-01-01

Twenty five years ago Alder and Wainwright discovered, by simulation, the 'long-time tails' in the velocity autocorrelation function of a single particle in fluid [1]. Since then, few qualitatively new results on long-time tails have been obtained by computer simulations. However, within the

Comparing downside risk measures for heavy tailed distributions

NARCIS (Netherlands)

Daníelsson, J.; Jorgensen, B.N.; Sarma, M.; Vries, de C.G.

2006-01-01

Using regular variation to define heavy tailed distributions, we show that prominent downside risk measures produce similar and consistent ranking of heavy tailed risk. Thus, regardless of the particular risk measure being used, assets will be ranked in a similar and consistent manner for heavy

Generation and characterization of a monoclonal antibody to the cytoplasmic tail of MUC16

DEFF Research Database (Denmark)

Gipson, Ilene K; Mandel, Ulla; Menon, Balaraj

2017-01-01

of the biological relevance of the C-terminal domain of MUC16 has been limited by lack of availability of monoclonal antibodies that recognize the native CT. Here, we report the development of a novel monoclonal antibody to the CT region of the molecule that recognizes native MUC16 and its enzymatically released CT...... for the disease and it is considered a promising target for immunotherapeutic intervention. Immunodetection of the mucin has to date been through antibodies that recognize its exceptionally large ectodomain. Similar to other membrane anchored mucins, MUC16 has a short cytoplasmic tail (CT), but studies...... region. The antibody is useful for immunoprecipitation of the released CT domain as demonstrated with the OVCAR3 ovarian cancer cell line and can be used for detailed cytolocalization in cells as well as in frozen sections of ocular surface and uterine epithelium....

Hydrology of Quirke and Panel uranium tailings basins

International Nuclear Information System (INIS)

King, R.M.; MacPhie, L.

1991-11-01

The research project described by this report provides the AECB with an independent assessment of the 'saturated tailings concept' for the decommissioning of tailing areas at the Rio Algom Quirke and Panel uranium mines near Elliot Lake in Northern Ontario. Hydrologic and hydraulic modelling for each facility showed the interrelation between the design of the water-level control facilities and the water levels in each cell for design flood and extreme low-flow conditions, taking into account all water-balance components. The estimate of seepage rates through the tailings mass is identified as a critical issue

Recycling of asbestos tailings used as reinforcing fillers in polypropylene based composites.

Science.gov (United States)

Zhai, Wensi; Wang, Yao; Deng, Yuan; Gao, Hongli; Lin, Zhen; Li, Mao

2014-04-15

In this work, asbestos tailings were recycled and used as reinforcing fillers to enhance the mechanical properties of polypropylene (PP). A silane coupling agent was used to chemically modify the asbestos tailings to increase the compatibility between asbestos tailings and polypropylene matrix. Both raw and chemically treated asbestos tailings with different loading levels (from 3 to 30 wt%) were utilized to fabricate composites. Mechanical properties of these composites have been investigated by dynamic mechanical analysis, tensile test and notched impact test. Results showed that hybridization of asbestos tailings in the composites enhanced the mechanical properties of neat PP evidently, and treated asbestos tailings/PP composites yielded even better mechanical properties compared with those of raw asbestos tailings/PP composites. This recycling method of asbestos tailings not only reduces disposal costs and avoids secondary pollution but also produces a new PP-based composite material with enhanced mechanical properties. Copyright © 2014 Elsevier B.V. All rights reserved.

Arsenic readily released to pore waters from buried mill tailings