Inhibition of the Nitrification Process of Activated Sludge Micro-Organism by Scrubber Water from an Industrial Flue Gas Cleaning Process

DEFF Research Database (Denmark)

Thomsen, Jens Peter

2007-01-01

the nitrogen removal. A major sewage cleaning plant in the southern part of Denmark is a recipient of industrial sewage from a major fish meal industry. Severe nitrification inhibition was observed in scrubber water from an incineration of process air, and the processes that lead to the production were stopped......The microbial transformation of ammonia to nitrate, the nitrification, is a central process in the nitrogen biogeochemical cycle. In a modern wastewater treatment plant, the nitrification process is a key process in the removal of nitrogen and inhibitory compounds in sewage can seriously affect....... In order to investigate the relation between incineration temperatures and the production of inhibitory compounds, the process air was burned at temperatures from 800°C to 1000°C. The termically affected condensate was collected and the nitrification inhibition effect of the condensate was tested using...

Nitrification inhibition by hexavalent chromium Cr(VI)--Microbial ecology, gene expression and off-gas emissions.

Science.gov (United States)

Kim, Young Mo; Park, Hongkeun; Chandran, Kartik

2016-04-01

The goal of this study was to investigate the responses in the physiology, microbial ecology and gene expression of nitrifying bacteria to imposition of and recovery from Cr(VI) loading in a lab-scale nitrification bioreactor. Exposure to Cr(VI) in the reactor strongly inhibited nitrification performance resulting in a parallel decrease in nitrate production and ammonia consumption. Cr(VI) exposure also led to an overall decrease in total bacterial concentrations in the reactor. However, the fraction of ammonia oxidizing bacteria (AOB) decreased to a greater extent than the fraction of nitrite oxidizing bacteria (NOB). In terms of functional gene expression, a rapid decrease in the transcript concentrations of amoA gene coding for ammonia oxidation in AOB was observed in response to the Cr(VI) shock. In contrast, transcript concentrations of the nxrA gene coding for nitrite oxidation in NOB were relatively unchanged compared to Cr(VI) pre-exposure levels. Therefore, Cr(VI) exposure selectively and directly inhibited activity of AOB, which indirectly resulted in substrate (nitrite) limitation to NOB. Significantly, trends in amoA expression preceded performance trends both during imposition of and recovery from inhibition. During recovery from the Cr(VI) shock, the high ammonia concentrations in the bioreactor resulted in an irreversible shift towards AOB populations, which are expected to be more competitive in high ammonia environments. An inadvertent impact during recovery was increased emission of nitrous oxide (N2O) and nitric oxide (NO), consistent with recent findings linking AOB activity and the production of these gases. Therefore, Cr(VI) exposure elicited multiple responses on the microbial ecology, gene expression and both aqueous and gaseous nitrogenous conversion in a nitrification process. A complementary interrogation of these multiple responses facilitated an understanding of both direct and indirect inhibitory impacts on nitrification. Copyright �

External and internal sources which inhibit the nitrification process in wastewater treatment plants

DEFF Research Database (Denmark)

Sinkjær, O.; Bøgebjerg, P.; Grüttner, H.

1996-01-01

the nitrification capacity monitored at the pilot plants has been in agreement with the design basis. The recycling of the scrubber water from the cleaning of sludge incineration flue gas was found to be an important internal source of inhibition at the Lynetten WWTP. Investigations show that it is possible...

Nitrification in inland waters

NARCIS (Netherlands)

Laanbroek, H.J.; Bollmann, A.; B. Ward, B.; J. Arp, D.; G. Klotz, M.

2011-01-01

Over the past 15 years, the use of modern molecular biological approaches has radically advanced our understanding of nitrification processes. With chapters contributed by leading experts in the field, Nitrification fully reviews all the latest research findings on microbes involved in conventional

Successful startup of a full-scale acrylonitrile wastewater biological treatment plant (ACN-WWTP) by eliminating the inhibitory effects of toxic compounds on nitrification.

Science.gov (United States)

Han, Yuanyuan; Jin, Xibiao; Wang, Feng; Liu, Yongdi; Chen, Xiurong

2014-01-01

During the startup of a full-scale anoxic/aerobic (A/O) biological treatment plant for acrylonitrile wastewater, the removal efficiencies of NH(3)-N and total Kjeldahl nitrogen (TKN) were 1.29 and 0.83% on day 30, respectively. The nitrification process was almost totally inhibited, which was mainly caused by the inhibitory effects of toxic compounds. To eliminate the inhibition, cultivating the bacteria that degrade toxic compounds with patience was applied into the second startup of the biological treatment plant. After 75 days of startup, the inhibitory effects of the toxic compounds on nitrification were eliminated. The treatment plant has been operated stably for more than 3 years. During the last 100 days, the influent concentrations of chemical oxygen demand (COD), NH(3)-N, TKN and total cyanide (TCN) were 831-2,164, 188-516, 306-542 and 1.17-9.57 mg L(-1) respectively, and the effluent concentrations were 257 ± 30.9, 3.30 ± 1.10, 31.6 ± 4.49 and 0.40 ± 0.10 mg L(-1) (n = 100), respectively. Four strains of cyanide-degrading bacteria which were able to grow with cyanide as the sole carbon and nitrogen source were isolated from the full-scale biological treatment plant. They were short and rod-shaped under scanning electron microscopy (SEM) and were identified as Brevundimonas sp., Rhizobium sp., Dietzia natronolimnaea and Microbacterium sp., respectively.

Dicyandiamide as nitrification inhibitor of pig slurry ammonium nitrogen in soil

Directory of Open Access Journals (Sweden)

Rogério Gonzatto

2016-05-01

Full Text Available ABSTRACT: Inhibition of nitrification of ammoniacal nitrogen pig slurry after its application to the soil can mitigate nitrogen (N losses by nitrate (NO3 - denitrification and leaching, with economical and environmental benefits. However, the use of this strategy is incipient in Brazil and, therefore, requires further assessment. The aim of this study was to evaluate the efficiency of dicyandiamide (DCD nitrification inhibitor in slowing the nitrification of ammoniacal N applied to the soil with pig slurry (PS. For this, incubation was performed in laboratory, where nitrification was assessed by NO3 - accumulation in the soil. Rates of 2.8, 5.7 and 11.3kg DCD ha-1 were compared, being applied to the soil during PS addition. Nitrification was inhibited by DCD, and inhibition magnitude and duration depended on DCD applied rate. At a dose of 11.3kg ha-1 DCD, nitrification was completely inhibited in the first 12 days. During the first month after PS application, each 2.8kg of DCD increase applied per hectare promoted NO3 --N reduction in the soil of 13.3kg ha-1, allowing longer ammoniacal N maintenance in the soil.

Applying the Nernst equation to simulate redox potential variations for biological nitrification and denitrification processes.

Science.gov (United States)

Chang, Cheng-Nan; Cheng, Hong-Bang; Chao, Allen C

2004-03-15

In this paper, various forms of Nernst equations have been developed based on the real stoichiometric relationship of biological nitrification and denitrification reactions. Instead of using the Nernst equation based on a one-to-one stoichiometric relation for the oxidizing and the reducing species, the basic Nernst equation is modified into slightly different forms. Each is suitable for simulating the redox potential (ORP) variation of a specific biological nitrification or denitrification process. Using the data published in the literature, the validity of these developed Nernst equations has been verified by close fits of the measured ORP data with the calculated ORP curve. The simulation results also indicate that if the biological process is simulated using an incorrect form of Nernst equation, the calculated ORP curve will not fit the measured data. Using these Nernst equations, the ORP value that corresponds to a predetermined degree of completion for the biochemical reaction can be calculated. Thus, these Nernst equations will enable a more efficient on-line control of the biological process.

Development of a Biochar-Plant-Extract-Based Nitrification Inhibitor and Its Application in Field Conditions

Directory of Open Access Journals (Sweden)

Jhónatan Reyes-Escobar

2015-10-01

Full Text Available The global use of nitrogen (N fertilizer has increased 10-fold in the last fifty years, resulting in increased N losses via nitrate leaching to groundwater bodies or from gaseous emissions to the atmosphere. One of the biggest problems farmers face in agricultural production systems is the loss of N. In this context, novel biological nitrification inhibitors (BNI using biochar (BC as a renewable matrix to increase N use efficiency, by reducing nitrification rates, have been evaluated. The chemical and morphological characteristics of BC were analyzed and BC-BNI complexes were formulated using plant extracts from pine (Pinus radiata, eucalyptus (Eucalyptus globulus and peumo (Cryptocarya alba. In field experiments, fertilizer and treatments, based on crude plant extracts and BC-BNI complexes, were applied and the effect on nitrification was periodically monitored, and at the laboratory level, a phytotoxicity assay was performed. The biochar-peumo (BCPe complex showed the highest nitrification inhibition (66% on day 60 after application compared with the crude plant extract, suggesting that BCPe complex protects the BNI against biotic or abiotic factors, and therefore BC-BNI complexes could increase the persistence of biological nitrification inhibitors. None of the biochar complexes had toxic effect on radish plants.

Archaeal Nitrification in Hot Springs

Science.gov (United States)

Richter, A.; Daims, H.; Reigstad, L.; Wanek, W.; Wagner, M.; Schleper, C.

2006-12-01

Biological nitrification, i.e. the aerobic conversion of ammonia to nitrate via nitrite, is a major component of the global nitrogen cycle. Until recently, it was thought that the ability to aerobically oxidize ammonia was confined to bacteria of the phylum Proteobacteria. However, it has recently been shown that Archaea of the phylum Crenarchaeota are also capable of ammonia oxidation. As many Crenarchaeota are thermophilic or hyperthermophilic, and at least some of them are capable of ammonia oxidation we speculated on the existence of (hyper)thermophilic ammonia-oxidizing archaea (AOA). Using PCR primers specifically targeting the archaeal ammonia monooxygenase (amoA) gene, we were indeed able to confirm the presence of such organisms in several hot springs in Reykjadalur, Iceland. These hot springs exhibited temperatures well above 80 °C and pH values ranging from 2.0 to 4.5. To proof that nitrification actually took place under these extreme conditions, we measured gross nitrification rates by the isotope pool dilution method; we added 15N-labelled nitrate to the mud and followed the dilution of the label by nitrate production from ammonium either in situ (incubation in the hot spring) or under controlled conditions in the laboratory (at 80 °C). The nitrification rates in the hot springs ranged from 0.79 to 2.22 mg nitrate-N per L of mud and day. Controls, in which microorganisms were killed before the incubations, demonstrated that the nitrification was of biological origin. Addition of ammonium increased the gross nitrification rate approximately 3-fold, indicating that the nitrification was ammonium limited under the conditions used. Collectively, our study provides evidence that (1) AOA are present in hot springs and (2) that they are actively nitrifying. These findings have major implications for our understanding of nitrogen cycling of hot environments.

Nitrification and in-situ uranium solution mining

International Nuclear Information System (INIS)

Johnson, D.; Humenick, M.J.

1980-01-01

The objective of this research was to determine the potential for conversion of ammonia to nitrate as a result of uranium solution mining operations. The work included literature evaluation and laboratory experimentation in both batch and continuous systems. Results indicate that a potential for nitrification could exist for some portions of the solution mining operating cycle. However, inhibition of nitrification was observed due to high ammonia and peroxide concentrations. Nitrification of ammonia also was observed to occur due to chemical oxidation by peroxide. 28 refs

Nitrification in agricultural soils: impact, actors and mitigation.

Science.gov (United States)

Beeckman, Fabian; Motte, Hans; Beeckman, Tom

2018-04-01

Nitrogen is one of the most important nutrients for plant growth and hence heavily applied in agricultural systems via fertilization. Nitrification, that is, the conversion of ammonium via nitrite to nitrate by soil microorganisms, however, leads to nitrate leaching and gaseous nitrous oxide production and as such to an up to 50% loss of nitrogen availability for the plant. Nitrate leaching also results in eutrophication of groundwater, drinking water and recreational waters, toxic algal blooms and biodiversity loss, while nitrous oxide is a greenhouse gas with a global warming potential 300× greater than carbon dioxide. Logically, inhibition of nitrification is an important strategy used in agriculture to reduce nitrogen losses, and contributes to a more environmental-friendly practice. However, recently identified and crucial players in nitrification, that is, ammonia-oxidizing archaea and comammox bacteria, seem to be under-investigated in this respect. In this review, we give an update on the different pathways in ammonia oxidation, the relevance for agriculture and the interaction with nitrification inhibitors. As such, we hope to pinpoint possible strategies to optimize the efficiency of nitrification inhibition. Copyright © 2018 Elsevier Ltd. All rights reserved.

Modeling Nitrous Oxide Production during Biological Nitrogen Removal via Nitrification and Denitrification: Extensions to the General ASM Models

DEFF Research Database (Denmark)

Ni, Bing-Jie; Ruscalleda, Maël; Pellicer i Nàcher, Carles

2011-01-01

on N2O production from four different mixed culture nitrification and denitrification reactor study reports. Modeling results confirm that hydroxylamine oxidation by ammonium oxidizers (AOB) occurs 10 times slower when NO2– participates as final electron acceptor compared to the oxic pathway. Among......Nitrous oxide (N2O) can be formed during biological nitrogen (N) removal processes. In this work, a mathematical model is developed that describes N2O production and consumption during activated sludge nitrification and denitrification. The well-known ASM process models are extended to capture N2O...

How inhibiting nitrification affects nitrogen cycle and reduces ...

Science.gov (United States)

We conducted a meta-analysis of 103 nitrification inhibitor (NI) studies, and evaluated how NI application affects crop productivity and other ecosystem services in agricultural systems. Our results showed that, compared to conventional fertilizer practice, applications of NI along with nitrogen (N) fertilizer increased crop nitrogen use efficiency, crop yield, and altered the pathways and the amount of N loss to environment. NI application increased ammonia emission, but reduced nitrate leaching and nitrous oxide emission, which led to a reduction of 12.9% of the total N loss. The cost and benefit analysis showed that the economic benefit of reducing N’s environmental impacts offset the cost of NI. NI application could bring additional revenue of $163.72 ha-1 for a maize farm. Taken together, our findings show that NI application may create a win-win scenario that increases agricultural output, while reducing the negative impact on the environment. Policies that encourage NI application would reduce N’s environmental impacts. A group from Chinese Academy of Sciences, US EPA-ORD and North Carolina examined the net environmental and economic effects of nitrification inhibitors to reduce nitrate leaching associated with farm fertilizers. They conducted a meta-analysis of studies examining nitrification inhibitors, and found that NI application increased ammonia emission, but reduced nitrate leaching and nitrous oxide emission, which led to a reduction of 12.9

Effect of acid orange 7 on nitrification process

Energy Technology Data Exchange (ETDEWEB)

He, Yongjie (ManTech Environmental Tech., Inc., Dayton, OH (United States)); Bishop, P.L. (Univ. of Cincinnati, OH (United States). Dept. of Civil and Environmental Engineering)

The effect of Acid Orange 7 (AO7), an azo dye commonly used in textile, pharmaceutical, food, and cosmetic industries, on the nitrification process is studied using completely stirred tank reactors (CSTR) and batch treatment systems. Azo dyes are of concern because many of the dyes or their metabolic intermediates are carcinogenic. AO7 biodegradation is found to be essentially complete when solids retention times (SRT) are maintained above 7.5 days, but systems with lower SRTs are unstable. It is shown that AO7 inhibits all stages of the nitrification process. Nitrite oxidizers are found to be more sensitive to AO7 than ammonium oxidizers. The results of kinetic studies indicate that the inhibition of ammonium oxidation is typified by noncompetitive inhibition; the presence of AO7 decreases the maximum substrate utilization rate and very slightly increases K[sub s], the half-saturation constant. AO7 is found to be less toxic to nitrification than some metal and phenolic compounds, but more toxic than some common organic compounds such as formalin, methanol, or acetone.

A novel bench-scale column assay to investigate site-specific nitrification biokinetics in biological rapid sand filters

DEFF Research Database (Denmark)

Tatari, Karolina; Smets, Barth F.; Albrechtsen, Hans-Jørgen

2013-01-01

A bench-scale assay was developed to obtain site-specific nitrification biokinetic information from biological rapid sand filters employed in groundwater treatment. The experimental set-up uses granular material subsampled from a full-scale filter, packed in a column, and operated with controlled...

Effect of pesticides on nitrification in aquatic sediment

Directory of Open Access Journals (Sweden)

A. Enrich-Prast

Full Text Available The aim of this work was to study the effect of the herbicides glyphosate, nonanoic acid, and dichlorprop-P and the insecticides potassium oil, malation and Pyretrin and their combinations on nitrification. Nitrification was measured in slurries from the eutrophic and shallow Brabrand Lake (Aarhus, Denmark, by inhibiting oxidation of nitrite to nitrate with chloride. All herbicides and insecticides influenced nitrification. The No Observed Effect Concentration (NOEC was assessed to be 30 µg.L-1 for glyphosate and nonanoic acid and 1 µg.L-1 for dichlorprop-P. The NOEC for malation and Pyretrin on nitrification was assessed to be 3 µg.L-1. No accumulation effect on nitrification of the insecticides malation and Pyretrin, or of the studied herbicides, was observed, indicating that their environmental impact is low at reduced concentrations, even in combination. The procedure used in this study can provide a useful tool for obtaining concentration limits for pesticides or other chemicals in a short period of time.

Effect of arsenic on nitrification of simulated mining water.

Science.gov (United States)

Papirio, S; Zou, G; Ylinen, A; Di Capua, F; Pirozzi, F; Puhakka, J A

2014-07-01

Mining and mineral processing of gold-bearing ores often release arsenic to the environment. Ammonium is released when N-based explosives or cyanide are used. Nitrification of simulated As-rich mining waters was investigated in batch bioassays using nitrifying cultures enriched in a fluidized-bed reactor (FBR). Nitrification was maintained at 100mg AsTOT/L. In batch assays, ammonium was totally oxidized by the FBR enrichment in 48 h. As(III) oxidation to As(V) occurred during the first 3h attenuating arsenic toxicity to nitrification. At 150 and 200mg AsTOT/L, nitrification was inhibited by 25%. Candidatus Nitrospira defluvii and other nitrifying species mainly colonized the FBR. In conclusion, the FBR enriched cultures of municipal activated sludge origins tolerated high As concentrations making nitrification a potent process for mining water treatment. Copyright © 2014 Elsevier Ltd. All rights reserved.

Effects of urea and (NH4)2SO4 on nitrification and acidification of Ultisols from southern China.

Science.gov (United States)

Tong, Deli; Xu, Renkou

2012-01-01

The mechanisms for the effects of ammonium-based fertilizers on soil acidification in subtropical regions are not well understood. Two Ultisols collected from cropland and a tea garden in Anhui and Jiangxi Provinces in subtropical southern China, respectively, were used to study the effects of urea and (NH4)2SO4 on the nitrification and acidification of soils with incubation experiments. Nitrification occurred at very low pH with no N fertilizer added and led to lowering of the soil pH by 0.53 and 0.30 units for the soils from Jiangxi and Anhui, respectively. Addition of urea accelerated nitrification and soil acidification in both Ultisols; while nitrification was inhibited by the addition of (NH4)2SO4, and greater input of (NH4)2SO4 led to greater inhibition of nitrification. Ammonia-oxidizing bacteria (AOB) played an important role in nitrification in cropland soil under acidic conditions. Addition of urea increased the soil pH at the early stages of incubation due to hydrolysis and stimulated the increase in the AOB population, and thus accelerated nitrification and soil acidification. At the end of incubation, the pH of Ultisol from Jiangxi had decreased by 1.25, 1.54 and 1.84 units compared to maximum values for the treatments with 150, 300 and 400 mg/kg of urea-N added, respectively; the corresponding figures were 0.95, 1.25 and 1.69 for the Ultisol from Anhui. However, addition of (N-H4)2SO4 inhibited the increase in the AOB population and thus inhibited nitrification and soil acidification. Soil pH for the treatments with 300 and 400 mg/kg of (NH4)2SO4-N remained almost constant during the incubation. AOB played an important role in nitrification of the cropland soil under acidic conditions. Addition of urea stimulated the increase in the AOB population and thus accelerated nitrification and soil acidification; while addition of (NH4)2SO4 inhibited the increase in the AOB population and thus inhibited nitrification.

Nitrification in Saline Industrial Wastewater

NARCIS (Netherlands)

Moussa, M.S.

2004-01-01

Biological nitrogen removal is widely and successfully applied for municipal wastewater. However, these experiences are not directly applicable to industrial wastewater, due to its specific composition. High salt levels in many industrial wastewaters affect nitrification negatively and improved

Impact of temperature on nitrification in biological activated carbon (BAC) filters used for drinking water treatment.

Science.gov (United States)

Andersson, A; Laurent, P; Kihn, A; Prévost, M; Servais, P

2001-08-01

The impact of temperature on nitrification in biological granular activated carbon (GAC) filters was evaluated in order to improve the understanding of the nitrification process in drinking water treatment. The study was conducted in a northern climate where very cold water temperatures (below 2 degrees C) prevail for extended periods and rapid shifts of temperature are frequent in the spring and fall. Ammonia removals were monitored and the fixed nitrifying biomass was measured using a method of potential nitrifying activity. The impact of temperature was evaluated on two different filter media: an opened superstructure wood-based activated carbon and a closed superstructure activated carbon-based on bituminous coal. The study was conducted at two levels: pilot scale (first-stage filters) and full-scale (second-stage filters) and the results indicate a strong temperature impact on nitrification activity. Ammonia removal capacities ranged from 40 to 90% in pilot filters, at temperatures above 10 degrees C, while more than 90% ammonia was removed in the full-scale filters for the same temperature range. At moderate temperatures (4-10 degrees C), the first stage pilot filters removed 10-40% of incoming ammonia for both media (opened and closed superstructure). In the full-scale filters, a difference between the two media in nitrification performances was observed at moderate temperatures: the ammonia removal rate in the opened superstructure support (more than 90%) was higher than in the closed superstructure support (45%). At low temperatures (below 4 degrees C) both media performed poorly. Ammonia removal capacities were below 30% in both pilot- and full-scale filters.

Nitrification of an industrial wastewater in a moving-bed biofilm reactor: effect of salt concentration.

Science.gov (United States)

Vendramel, Simone; Dezotti, Marcia; Sant'Anna, Geraldo L

2011-01-01

Nitrification of wastewaters from chemical industries can pose some challenges due to the presence of inhibitory compounds. Some wastewaters, besides their organic complexity present variable levels of salt concentration. In order to investigate the effect of salt (NaCl) content on the nitrification of a conventional biologically treated industrial wastewater, a bench scale moving-bed biofilm reactor was operated on a sequencing batch mode. The wastewater presenting a chloride content of 0.05 g l(-1) was supplemented with NaCl up to 12 g Cl(-) l(-1). The reactor operation cycle was: filling (5 min), aeration (12 or 24h), settling (5 min) and drawing (5 min). Each experimental run was conducted for 3 to 6 months to address problems related to the inherent wastewater variability and process stabilization. A PLC system assured automatic operation and control of the pertinent process variables. Data obtained from selected batch experiments were adjusted by a kinetic model, which considered ammonia, nitrite and nitrate variations. The average performance results indicated that nitrification efficiency was not influenced by chloride content in the range of 0.05 to 6 g Cl(-) l(-1) and remained around 90%. When the chloride content was 12 g Cl(-) l(-1), a significant drop in the nitrification efficiency was observed, even operating with a reaction period of 24 h. Also, a negative effect of the wastewater organic matter content on nitrification efficiency was observed, which was probably caused by growth of heterotrophs in detriment of autotrophs and nitrification inhibition by residual chemicals.

Some plant extracts retarde nitrification in soil

Directory of Open Access Journals (Sweden)

Abdul–Mehdi S. AL-ANSARI

2015-12-01

Full Text Available An incubation experiment was conducted to evaluate the effect of aqueous extracts of 17 plant materials on nitrification inhibition of urea- N in soil as compared with chemical inhibitor Dicyandiamide (DCD. Plant materials used in study were collected from different areas of Basrah province, south of Iraq. Aqueous extracts were prepared at ratio of 1:10 (plant material: water and added at conc. of 0.05, 0.10 and 0.20 ml g– 1 soil to loamy sand soil. DCD was added to soil at rate of 50 µg g-1 soil . Soil received urea at rate of 1000 µg N g-1 soil. Treated soils were incubated at 30 OC for 40 days. Results showed that application of all plant extracts, except those of casuarina, date palm and eucalyptus to soil retarded nitrification in soil. Caper, Sowthistle ,bladygrass and pomegranate extracts showed highest inhibition percentage (51, 42, 40 and 40 %, respectively and were found to be more effective than DCD (33 %. Highest inhibition was achieved by using those extracts at conc. of 0.1 ml g-1 soil after 10 days of incubation . Data also revealed that treated soil with these plant extracts significantly increased amount of NH4+–N and decreased amount of NO3-–N accumulation in soil compared with DCD and control treatments. Results of the study suggested a possibility of using aqueous extracts of some studied plants as potent nitrification inhibitor in soil.

Adaptation and monitoring of microorganisms in petroleum industry wastewater nitrification processes

Directory of Open Access Journals (Sweden)

A. Madero

1998-07-01

Full Text Available Biological removal of ammonia nitrogen is carried out in two successive stages, nitrification and denitrification. This work studied the nitrification process on microorganisms isolated from different aquifer sources: a eutrophicate pond and residual waters from two treatment plants (petrochemical and domestic

Effects of Nitrification Inhibitors and Sulphur Coated Urea(SCU on Different Nitrogen Sources and Wheat Yield

Directory of Open Access Journals (Sweden)

LI Yong-qiang

2016-05-01

Full Text Available Nitrogen is essential for plant growth and health, and it is also a limiting factor for the growth in most agricultural systems. Intensive N fertilizer application has become the traditional habit for agricultural producers in China because of its importance to plant productivity and agricultural land profitability. But some problems have appeared with the increase of the amount of nitrogen fertilizer applied, urea used in crops is easy to lose from volatilization or leaching. Therefore, current crop management practices lead to a highly nitrifying soil environments. Nitrogen emission is the main source of soil acidity and environmental pollution. Several methods for the use of slow controlled release urea have been reported to be used to control the pollution and to enhance nitrogen use efficiency. There is a growing interest in the formulations of coated chemical fertilizers with both urease inhibitor and nitrification inhibitor. Urease inhibitor and nitrification inhibitor may improve urea N-use efficiency and minimize N losses by gaseous emissions of ammonia(NH3 to the atmosphere and nitrate(NO3- leaching into the surface and ground water. Dicyandiamide(DCD is a nitrification inhibitor that has been studied for many years, it can effectively inhibit nitrification and N2O emission in many agricultural ecosystems. However, limited information is available on the use of the combination of nitrification inhibitor and urease inhibitor applied with urea fertilizer, especially for thiourea(THU and thiourea formaldehyde resin(TFR applications. Therefore the purpose of this study is to investigate the effect of urea with different inhibitors to improve the efficiency of nitrogen utilization. A field pot experiment was conducted to explore how to increase the concentration of DCD/THU/TFR/sulfur-coated urea(SCU to affect the transformation of soil nitrogen and wheat yield. The experiment was designed for twelve treatments which included no nitrogen

From Partial nitrification to canon in an aerobic granular SBR

International Nuclear Information System (INIS)

Vazquez-Padin, J.; Figueroa, M.; Campos, J. L.; Mosquera-Corral, A.; Mendez, R.

2009-01-01

Nitrogen removal via nitrification-denitrification processes is commonly used in biology wastewater treatment plants to remove nitrogen compounds. In recent years new technologies emerged bringing solutions to remove nitrogen from wastewaters with not enough COD content to complete the denitrification process. An alternative strategy to the conventional nitrification-denitrification processes has been developed in the nine tries consisting of a combination of the oxidation of half of the ammonium from the wastewater to nitrite via partial nitrification and the removal of both, ammonium and formed nitrite by the Anammox process. (Author)

Inhibitory effect of cyanide on wastewater nitrification ...

Science.gov (United States)

The effect of CN- (CN-) on nitrification was examined with samples from nitrifying wastewater enrichments using two different approaches: by measuring substrate (ammonia) specific oxygen uptake rates (SOUR), and by using RT-qPCR to quantify the transcripts of functional genes involved in nitrification. The nitrifying bioreactor was operated as a continuous reactor with a 24 h hydraulic retention time. The samples were exposed in batch vessels to cyanide for a period of 12 h. The concentrations of CN- used in the batch assays were 0.03, 0.06, 0.1 and 1.0 mg/L. There was considerable decrease in SOUR with increasing dosages of CN-. A decrease of more than 50% in nitrification activity was observed at 0.1 mg/L CN-. Based on the RT-qPCR data, there was notable reduction in the transcript levels of amoA and hao for increasing CN- dosage, which corresponded well with the ammonia oxidation activity measured via SOUR. The inhibitory effect of cyanide may be attributed to the affinity of cyanide to bind ferric heme proteins, which disrupt protein structure and function. The correspondence between the relative expression of functional genes and SOUR shown in this study demonstrates the efficacy of RNA based function-specific assays for better understanding of the effect of toxic compounds on nitrification activity in wastewater. Nitrification is the first step of nitrogen removal is wastewater, and it is susceptible to inhibition by many industrial chemical. We looked at

Nitrification of highly contaminated waste water with retention of biomass

International Nuclear Information System (INIS)

Weichgrebe, D.

1992-09-01

The AIF Research Project No 7698 was concerned with the nitrification of highly contaminated waste water with retention of biomass. A compact system for the nitrification was developed and optimized in the investigations. This is an over-dammed fixed bed reactor with structured packing elements and membrane gasification. The fixed bed reactor was successfully installed in a multi-stage compact plant on the laboratory scale for the biological treatment of dump trickled water. With the conclusion of the investigations, design data are available for the technical scale realisation of nitrification in fixed bed reactors. (orig.) [de

Stratification of nitrification activity in rapid sand filters for drinking water treatment

DEFF Research Database (Denmark)

Tatari, Karolina; Smets, Barth F.; Musovic, Sanin

2013-01-01

Rapid sand filters used in groundwater treatment remove ammonium, iron and manganese from the water. Ammonium is removed biologically by nitrifying microorganisms attached on the sand surface. Nitrification kinetics and activity is strongly affected by filter design and operation, which are the key...... and maximum nitrification capacity are derived and used to quantify nitrification activity. Nitrification activity was concentrated at the top 10 cm of filter depth, and maximum nitrification capacity was 7 g NH4+-N/ m3 sand/h compared with 0.8-0.4 g NH4+-N/ m3 sand/h in the middle and bottom layers. A water...... of this study is to investigate nitrification activity in a rapid sand filter, with focus on its homogeneity and how it relates to filter performance. Two groundwater treatment plants in Denmark were selected for the experimental investigations. Plant 1 operates a single line of pre and after filters and has...

Ammonium uptake by phytoplankton regulates nitrification in the sunlit ocean.

Science.gov (United States)

Smith, Jason M; Chavez, Francisco P; Francis, Christopher A

2014-01-01

Nitrification, the microbial oxidation of ammonium to nitrate, is a central part of the nitrogen cycle. In the ocean's surface layer, the process alters the distribution of inorganic nitrogen species available to phytoplankton and produces nitrous oxide. A widely held idea among oceanographers is that nitrification is inhibited by light in the ocean. However, recent evidence that the primary organisms involved in nitrification, the ammonia-oxidizing archaea (AOA), are present and active throughout the surface ocean has challenged this idea. Here we show, through field experiments coupling molecular genetic and biogeochemical approaches, that competition for ammonium with phytoplankton is the strongest regulator of nitrification in the photic zone. During multiday experiments at high irradiance a single ecotype of AOA remained active in the presence of rapidly growing phytoplankton. Over the course of this three day experiment, variability in the intensity of competition with phytoplankton caused nitrification rates to decline from those typical of the lower photic zone (60 nmol L-1 d-1) to those in well-lit layers (ammonium than they are by light itself. This finding advances our ability to model the impact of nitrification on estimates of new primary production, and emphasizes the need to more strongly consider the effects of organismal interactions on nutrient standing stocks and biogeochemical cycling in the surface of the ocean.

Inhibitory effect of cyanide on nitrification process and its eliminating method in a suspended activated sludge process.

Science.gov (United States)

Han, Yuanyuan; Jin, Xibiao; Wang, Yuan; Liu, Yongdi; Chen, Xiurong

2014-02-01

Inhibition of nitrification by four typical pollutants (acrylonitrile, acrylic acid, acetonitrile and cyanide) in acrylonitrile wastewater was investigated. The inhibitory effect of cyanide on nitrification was strongest, with a 50% inhibitory concentration of 0.218 mg·gVSS-1 being observed in a municipal activated sludge system. However, the performance of nitrification was recovered when cyanide was completely degraded. The nitrification, which had been inhibited by 4.17 mg·gVSS-1 of free cyanide for 24 h, was recovered to greater than 95% of that without cyanide after 10 days of recovery. To overcome cyanide inhibition, cyanide-degrading bacteria were cultivated in a batch reactor by increasing the influent cyanide concentration in a stepwise manner, which resulted in an increase in the average cyanide degradation rate from 0.14 to 1.01 mg CN-·gVSS-1·h-1 over 20 days. The cultured cyanide-degrading bacteria were shaped like short rods, and the dominant cyanide-degrading bacteria strain was identified as Pseudomonas fluorescens NCIMB by PCR.

Effects of Cr(III) and CR(VI) on nitrification inhibition as determined by SOUR, function-specific gene expression and 16S rRNA sequence analysis of wastewater nitrifying enrichments

Data.gov (United States)

U.S. Environmental Protection Agency — Data generated to test nitrification inhibition of chromium. This dataset is associated with the following publication: Kapoor, V., M. Elk, X. Li, C. Impellitteri ,...

Brassicaceae tissues as inhibitors of nitrification in soil.

Science.gov (United States)

Brown, Paul D; Morra, Matthew J

2009-09-09

Brassicaceae crops often produce an unexplained increase in plant-available soil N possibly related to bioactive compounds produced from glucosinolates present in the tissues. Our objective was to determine if glucosinolate-containing tissues inhibit nitrification, thereby potentially explaining this observation. Ammonium, NO(2)(-), and NO(3)(-) N were measured in soils amended with Brassicaceae ( Isatis tinctoria L., Brassica napus L., Brassica juncea L., and Sinapis alba L.) tissues containing different glucosinolate types and concentrations or Kentucky bluegrass ( Poa pratensis L.) residues with equivalent C/N ratios as the Brassicaceae samples. There was greater accumulation of NH(4)(+) N in soils amended with tissues containing high glucosinolate concentrations as compared to soils amended with tissues containing no or low glucosinolate concentrations. Nitrite N was detected only in soils amended with Brassicaceae tissues having the highest glucosinolate concentrations. The positive correlation of both NH(4)(+) and NO(2)(-) N accumulation with the glucosinolate concentration indicates the participation of glucosinolate hydrolysis products in nitrification inhibition.

Osmotic stress on nitrification in an airlift bioreactor

International Nuclear Information System (INIS)

Jin Rencun; Zheng Ping; Mahmood, Qaisar; Hu Baolan

2007-01-01

The effect of osmotic pressure on nitrification was studied in a lab-scale internal-loop airlift-nitrifying reactor. The reactor slowly adapted to the escalating osmotic pressure during 270 days operation. The conditions were reversed to the initial stage upon full inhibition of the process. Keeping influent ammonium concentration constant at 420 mg N L -1 and hydraulic retention time at 20.7 h, with gradual increase in osmotic pressure from 4.3 to 18.8 x 10 5 Pa by adding sodium sulphate, the ammonium removal efficiencies of the nitrifying bioreactor were maintained at 93-100%. Further increase in osmotic pressure up to 19.2 x 10 5 Pa resulted in drop of the ammonium conversion to 69.2%. The osmotic pressure caused abrupt inhibition of nitrification without any alarm and the critical osmotic pressure value causing inhibition remained between 18.8 and 19.2 x 10 5 Pa. Nitrite oxidizers were found more sensitive to osmotic stress as compared with ammonia oxidizers, leading to nitrite accumulation up to 61.7% in the reactor. The performance of bioreactor recovered gradually upon lowering the osmotic pressure. Scanning and transmission electron microscopy indicated that osmotic stress resulted in simplification of the nitrifying bacterial populations in the activated sludge as the cellular size reduced; the inner membrane became thinner and some unknown inclusions appeared within the cells. The microbial morphology and cellular structure restored upon relieving the osmotic pressure. Addition of potassium relieved the effect of osmotic pressure upon nitrification. Results demonstrate that the nitrifying reactor possesses the potential to treat ammonium-rich brines after acclimatization

Ammonium uptake by phytoplankton regulates nitrification in the sunlit ocean.

Directory of Open Access Journals (Sweden)

Jason M Smith

Full Text Available Nitrification, the microbial oxidation of ammonium to nitrate, is a central part of the nitrogen cycle. In the ocean's surface layer, the process alters the distribution of inorganic nitrogen species available to phytoplankton and produces nitrous oxide. A widely held idea among oceanographers is that nitrification is inhibited by light in the ocean. However, recent evidence that the primary organisms involved in nitrification, the ammonia-oxidizing archaea (AOA, are present and active throughout the surface ocean has challenged this idea. Here we show, through field experiments coupling molecular genetic and biogeochemical approaches, that competition for ammonium with phytoplankton is the strongest regulator of nitrification in the photic zone. During multiday experiments at high irradiance a single ecotype of AOA remained active in the presence of rapidly growing phytoplankton. Over the course of this three day experiment, variability in the intensity of competition with phytoplankton caused nitrification rates to decline from those typical of the lower photic zone (60 nmol L-1 d-1 to those in well-lit layers (<1 nmol L-1 d-1. During another set of experiments, nitrification rates exhibited a diel periodicity throughout much of the photic zone, with the highest rates occurring at night when competition with phytoplankton is lowest. Together, the results of our experiments indicate that nitrification rates in the photic zone are more strongly regulated by competition with phytoplankton for ammonium than they are by light itself. This finding advances our ability to model the impact of nitrification on estimates of new primary production, and emphasizes the need to more strongly consider the effects of organismal interactions on nutrient standing stocks and biogeochemical cycling in the surface of the ocean.

EFFECTS OF NITRIFICATION INHIBITORS ON MINERAL NITROGEN DYNAMICS IN AGRICULTURE SOILS

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Ferisman Tindaon

2011-10-01

Full Text Available Experiments were conducted under laboratory conditions to elucidate the effect of three nitrification inhibitors viz, 3.4dimethylpyrazo-lephosphate (DMPP, 4-Chlormethylpyrazole (ClMP and dicyandiamide (DCD on mineral nitrogen dynamics of (NH42SO4 in soil incubated at 25oC in soils. The quantitative determination of ammonium, nitrite and nitrate were carried out spectrophotometrically, while potential denitrify-cation capacity (PDC was measured gas chromatographically. DMPP, ClMP and DCD were used on recommended rates of 90kg N ha-1 corresponding to 0.36µg DMPP; 0.25µg ClMP and 10µg DCD g-1 dry soil. In all treatments, the influence of 1, 10, 50, 100, 250 and 500 times of the recommended-concentrations were examined. Results suggested that DMPP, ClMP and DCD applied at rates generally recommended for agricultural use may not be effective to inhibit nitrification. Thus even at the highest tested NIs-concentrations, nitrate and nitrite formation still occurred. Application of high concentrations of these chemicals up to 180µg DMPP, 125µg ClMP and 2500µg DCD were needed for inhibiting nitrification completely. The three NIs began to inhibit PDC at 10 to 50 times recommended concentration and were more effective in sandy than in loamy or clay soils. ClMP influenced PDC at much lower concentration as DMPP or DCD.

Isolation of high-salinity-tolerant bacterial strains, Enterobacter sp., Serratia sp., Yersinia sp., for nitrification and aerobic denitrification under cyanogenic conditions.

Science.gov (United States)

Mpongwana, N; Ntwampe, S K O; Mekuto, L; Akinpelu, E A; Dyantyi, S; Mpentshu, Y

2016-01-01

Cyanides (CN(-)) and soluble salts could potentially inhibit biological processes in wastewater treatment plants (WWTPs), such as nitrification and denitrification. Cyanide in wastewater can alter metabolic functions of microbial populations in WWTPs, thus significantly inhibiting nitrifier and denitrifier metabolic processes, rendering the water treatment processes ineffective. In this study, bacterial isolates that are tolerant to high salinity conditions, which are capable of nitrification and aerobic denitrification under cyanogenic conditions, were isolated from a poultry slaughterhouse effluent. Three of the bacterial isolates were found to be able to oxidise NH(4)-N in the presence of 65.91 mg/L of free cyanide (CN(-)) under saline conditions, i.e. 4.5% (w/v) NaCl. The isolates I, H and G, were identified as Enterobacter sp., Yersinia sp. and Serratia sp., respectively. Results showed that 81% (I), 71% (G) and 75% (H) of 400 mg/L NH(4)-N was biodegraded (nitrification) within 72 h, with the rates of biodegradation being suitably described by first order reactions, with rate constants being: 4.19 h(-1) (I), 4.21 h(-1) (H) and 3.79 h(-1) (G), respectively, with correlation coefficients ranging between 0.82 and 0.89. Chemical oxygen demand (COD) removal rates were 38% (I), 42% (H) and 48% (G), over a period of 168 h with COD reduction being highest at near neutral pH.

Simultaneous biological nutrient removal: evaluation of autotrophic denitrification, heterotrophic nitrification, and biological phosphorus removal in full-scale systems.

Science.gov (United States)

Littleton, Helen X; Daigger, Glen T; Strom, Peter F; Cowan, Robert A

2003-01-01

Simultaneous biological nutrient removal (SBNR) is the biological removal of nitrogen and phosphorus in excess of that required for biomass synthesis in a biological wastewater treatment system without defined anaerobic or anoxic zones. Evidence is growing that significant SBNR can occur in many systems, including the aerobic zone of systems already configured for biological nutrient removal. Although SBNR systems offer several potential advantages, they cannot be fully realized until the mechanisms responsible for SBNR are better understood. Consequently, a research program was initiated with the basic hypothesis that three mechanisms might be responsible for SBNR: the reactor macroenvironment, the floc microenvironment, and novel microorganisms. Previously, the nutrient removal capabilities of seven full-scale, staged, closed-loop bioreactors known as Orbal oxidation ditches were evaluated. Chemical analysis and microbiological observations suggested that SBNR occurred in these systems. Three of these plants were further examined in this research to evaluate the importance of novel microorganisms, especially for nitrogen removal. A screening tool was developed to determine the relative significance of the activities of microorganisms capable of autotrophic denitrification and heterotrophic nitrification-aerobic denitrification in biological nutrient removal systems. The results indicated that novel microorganisms were not substantial contributors to SBNR in the plants studied. Phosphorus metabolism (anaerobic release, aerobic uptake) was also tested in one of the plants. Activity within the mixed liquor that was consistent with current theories for phosphorus-accumulating organisms (PAOs) was observed. Along with other observations, this suggests the presence of PAOs in the facilities studied.

Online measurement of nitrification inhibitors in sewage received by an industrial sewage treatment plant. Development of a nitrification toximeter; Online-Messung nitrifikationshemmender Stoffe im Zulauf einer Industrieklaeranlage - Entwicklung eines Nitrifikationstoximeters

Energy Technology Data Exchange (ETDEWEB)

Haid, M. [BASF AG, Ludwigshafen am Rhein (Germany)

1999-07-01

At an industrial sewage treatment plant, the ammonium freight in the effluent is to be further reduced in the future through nitrification. But constantly low effluent concentrations are only possible if the nitrification process is not inhibited. Bouts of critical concentrations of nitrification inhibitors in sewage received by treatment plant are potentially disturbing. Online measurement of nitrification inhibitors in sewage arriving at the treatment plant is to recognize such bouts and permit timely alert so that counter-measures can be taken, which may consist in routing sewage with such toxic concentrations into a storage basin, whereby a sharp slump in the nitrification process can be avoided. (orig.) [German] In einer Industrieklaeranlage soll kuenftig durch Nitrifikation die Ammoniumfracht im Auslauf weiter gesenkt werden. Konstant niedrige Ablaufwerte sind aber nur dann moeglich, wenn der Nitrifikationsprozess ungestoert ablaufen kann. Stoesse nitrifikationshemmender Stoffe in kritischen Konzentrationen im Zulauf zur Klaeranlage sind eine moegliche Stoergroesse. Mit Hilfe einer Online-Nitrifikationshemmmessung im Klaeranlagenzulauf sollen solche Stoesse erkannt und rechtzeitig alarmiert werden, damit Gegenmassnahmen, wie z.B. das Auffangen des toxischen Stosses durch eine Sicherheitsschaltung in einem Speicherbecken, eingeleitet und so signifikante Einbrueche des Nitrifikationsprozesses vermieden werden koennen. (orig.)

Effects of C/N ratio on nitrous oxide production from nitrification in a laboratory-scale biological aerated filter reactor.

Science.gov (United States)

He, Qiang; Zhu, Yinying; Fan, Leilei; Ai, Hainan; Huangfu, Xiaoliu; Chen, Mei

2017-03-01

Emission of nitrous oxide (N 2 O) during biological wastewater treatment is of growing concern. This paper reports findings of the effects of carbon/nitrogen (C/N) ratio on N 2 O production rates in a laboratory-scale biological aerated filter (BAF) reactor, focusing on the biofilm during nitrification. Polymerase chain reaction-denaturing gradient gel electrophoresis (PCR-DGGE) and microelectrode technology were utilized to evaluate the mechanisms associated with N 2 O production during wastewater treatment using BAF. Results indicated that the ability of N 2 O emission in biofilm at C/N ratio of 2 was much stronger than at C/N ratios of 5 and 8. PCR-DGGE analysis showed that the microbial community structures differed completely after the acclimatization at tested C/N ratios (i.e., 2, 5, and 8). Measurements of critical parameters including dissolved oxygen, oxidation reduction potential, NH 4 + -N, NO 3 - -N, and NO 2 - -N also demonstrated that the internal micro-environment of the biofilm benefit N 2 O production. DNA analysis showed that Proteobacteria comprised the majority of the bacteria, which might mainly result in N 2 O emission. Based on these results, C/N ratio is one of the parameters that play an important role in the N 2 O emission from the BAF reactors during nitrification.

Recovery of soil nitrification after long-term zinc exposure and its co-tolerance to Cu in different soils.

Science.gov (United States)

Liu, Aiju; Fang, Dianmei; Wang, Chao; Li, Menghong; Young, Robert B

2015-01-01

Soils sampled from different locations of China were used to manipulate soil microbial diversity and to assess the effect of the diversity of the soil nitrifying community on the recovery of the soil nitrification to metal stress (zinc). Ten treatments were either or not amended with ZnCl2. Subsequently, a spike-on-spike assay was set up to test for the tolerance of soil nitrification to zinc (Zn) and copper (Cu). Initially, Zn amendment completely inhibited nitrification. After a year of Zn exposure, recovery of the potential nitrification rate in Zn-amended soils ranged from 28 to 126% of the potential nitrification rate in the corresponding Zn-nonamended soils. This recovery was strongly related to the potential nitrification rate before Zn amendment and soil pH. Increased Zn tolerance of the soil nitrification was consistently observed in response to corresponding soil contamination. Co-tolerance to Cu was obtained in all 1,000-mg kg(-1) Zn-amended soils. This tolerance was also strongly related to the potential nitrification rate before Zn amendment and soil pH. Our data indicate that inherently microbial activity can be a significant factor for the recovery of soil functioning derived from metal contamination.

Trait-based representation of biological nitrification: Model development, testing, and predicted community composition

Directory of Open Access Journals (Sweden)

Nick eBouskill

2012-10-01

Full Text Available Trait-based microbial models show clear promise as tools to represent the diversity and activity of microorganisms across ecosystem gradients. These models parameterize specific traits that determine the relative fitness of an ‘organism’ in a given environment, and represent the complexity of biological systems across temporal and spatial scales. In this study we introduce a microbial community trait-based modeling framework (MicroTrait focused on nitrification (MicroTrait-N that represents the ammonia-oxidizing bacteria (AOB and ammonia-oxidizing archaea (AOA and nitrite oxidizing bacteria (NOB using traits related to enzyme kinetics and physiological properties. We used this model to predict nitrifier diversity, ammonia (NH3 oxidation rates and nitrous oxide (N2O production across pH, temperature and substrate gradients. Predicted nitrifier diversity was predominantly determined by temperature and substrate availability, the latter was strongly influenced by pH. The model predicted that transient N2O production rates are maximized by a decoupling of the AOB and NOB communities, resulting in an accumulation and detoxification of nitrite to N2O by AOB. However, cumulative N2O production (over six month simulations is maximized in a system where the relationship between AOB and NOB is maintained. When the reactions uncouple, the AOB become unstable and biomass declines rapidly, resulting in decreased NH3 oxidation and N2O production. We evaluated this model against site level chemical datasets from the interior of Alaska and accurately simulated NH3 oxidation rates and the relative ratio of AOA:AOB biomass. The predicted community structure and activity indicate (a parameterization of a small number of traits may be sufficient to broadly characterize nitrifying community structure and (b changing decadal trends in climate and edaphic conditions could impact nitrification rates in ways that are not captured by extant biogeochemical models.

Toxicity of Nitrification Inhibitors on Dehydrogenase Activity in Soils

OpenAIRE

Ferisman Tindaon; Gero Benckiser; Johannes C. G. Ottow

2011-01-01

The objective of this research was to determine the effects of nitrification inhibitors (NIs) such as 3,4-dimethylpyrazolephosphate=DMPP, 4-Chlor-methylpyrazole phosphate=ClMPP and dicyandiamide,DCD) which might be expected to inhibit microbial activity, on dehydrogenase activity (DRA),in three different soils in laboratory conditions. Dehydrogenase activity were assessed via reduction of 2-p-Iodophenyl-3-p-nitrophenyl-5-phenyltetrazoliumchloride (INT). The toxicity and dose response curve of...

Nitrification inhibitors mitigated reactive gaseous nitrogen intensity in intensive vegetable soils from China.

Science.gov (United States)

Fan, Changhua; Li, Bo; Xiong, Zhengqin

2018-01-15

Nitrification inhibitors, a promising tool for reducing nitrous oxide (N 2 O) losses and promoting nitrogen use efficiency by slowing nitrification, have gained extensive attention worldwide. However, there have been few attempts to explore the broad responses of multiple reactive gaseous nitrogen emissions of N 2 O, nitric oxide (NO) and ammonia (NH 3 ) and vegetable yield to nitrification inhibitor applications across intensive vegetable soils in China. A greenhouse pot experiment with five consecutive vegetable crops was performed to assess the efficacies of two nitrification inhibitors, namely, nitrapyrin and dicyandiamide on reactive gaseous nitrogen emissions, vegetable yield and reactive gaseous nitrogen intensity in four typical vegetable soils representing the intensive vegetable cropping systems across mainland China: an Acrisol from Hunan Province, an Anthrosol from Shanxi Province, a Cambisol from Shandong Province and a Phaeozem from Heilongjiang Province. The results showed soil type had significant influences on reactive gaseous nitrogen intensity, with reactive gaseous nitrogen emissions and yield mainly driven by soil factors: pH, nitrate, C:N ratio, cation exchange capacity and microbial biomass carbon. The highest reactive gaseous nitrogen emissions and reactive gaseous nitrogen intensity were in Acrisol while the highest vegetable yield occurred in Phaeozem. Nitrification inhibitor applications decreased N 2 O and NO emissions by 1.8-61.0% and 0.8-79.5%, respectively, but promoted NH 3 volatilization by 3.2-44.6% across all soils. Furthermore, significant positive correlations were observed between inhibited N 2 O+NO and stimulated NH 3 emissions with nitrification inhibitor additions across all soils, indicating that reduced nitrification posed the threat of NH 3 losses. Additionally, reactive gaseous nitrogen intensity was significantly reduced in the Anthrosol and Cambisol due to the reduced reactive gaseous nitrogen emissions and increased

Effects of dynamic operating conditions on nitrification in biological rapid sand filters for drinking water treatment

DEFF Research Database (Denmark)

Lee, Carson Odell; Boe-Hansen, Rasmus; Musovic, Sanin

2014-01-01

Biological rapid sand filters are often used to remove ammonium from groundwater for drinking water supply. They often operate under dynamic substrate and hydraulic loading conditions, which can lead to increased levels of ammonium and nitrite in the effluent. To determine the maximum nitrification...... operating conditions. The ammonium removal rate of the filter was determined by the ammonium loading rate, but was independent of both the flow and influent ammonium concentration individually. Ammonia-oxidizing bacteria and archaea were almost equally abundant in the filter. Both ammonium removal...... rates and safe operating windows of rapid sand filters, a pilot scale rapid sand filter was used to test short-term increased ammonium loads, set by varying either influent ammonium concentrations or hydraulic loading rates. Ammonium and iron (flock) removal were consistent between the pilot...

The effect of temperature on the efficiency of industrial wastewater nitrification and its (genotoxicity

Directory of Open Access Journals (Sweden)

Gnida Anna

2016-03-01

Full Text Available The paper deals with the problem of the determination of the effects of temperature on the efficiency of the nitrification process of industrial wastewater, as well as its toxicity to the test organisms. The study on nitrification efficiency was performed using wastewater from one of Polish chemical factories. The chemical factory produces nitrogen fertilizers and various chemicals. The investigated wastewater was taken from the influent to the industrial mechanical-biological wastewater treatment plant (WWTP. The WWTP guaranteed high removal efficiency of organic compounds defined as chemical oxygen demand (COD but periodical failure of nitrification performance was noted in last years of the WWTP operation. The research aim was to establish the cause of recurring failures of nitrification process in the above mentioned WWTP. The tested wastewater was not acutely toxic to activated sludge microorganisms. However, the wastewater was genotoxic to activated sludge microorganisms and the genotoxicity was greater in winter than in spring time. Analysis of almost 3 years’ period of the WWTP operation data and laboratory batch tests showed that activated sludge from the WWTP under study is very sensitive to temperature changes and the nitrification efficiency collapses rapidly under 16°C. Additionally, it was calculated that in order to provide the stable nitrification, in winter period the sludge age (SRT in the WWTP should be higher than 35 days.

Complete nitrification by Nitrospira bacteria

DEFF Research Database (Denmark)

Daims, Holger; Lebedeva, Elena V.; Pjevac, Petra

2015-01-01

Nitrification, the oxidation of ammonia via nitrite to nitrate, has always been considered to be a two-step process catalysed by chemolithoautotrophic microorganisms oxidizing either ammonia or nitrite. No known nitrifier carries out both steps, although complete nitrification should be energetic...

How inhibiting nitrification affects nitrogen cycle and reduces environmental impacts of anthropogenic nitrogen input

Science.gov (United States)

We conducted a meta-analysis of 103 nitrification inhibitor (NI) studies, and evaluated how NI application affects crop productivity and other ecosystem services in agricultural systems. Our results showed that, compared to conventional fertilizer practice, applications of NI alo...

Effects of silver nanoparticles on nitrification and associated nitrous oxide production in aquatic environments.

Science.gov (United States)

Zheng, Yanling; Hou, Lijun; Liu, Min; Newell, Silvia E; Yin, Guoyu; Yu, Chendi; Zhang, Hongli; Li, Xiaofei; Gao, Dengzhou; Gao, Juan; Wang, Rong; Liu, Cheng

2017-08-01

Silver nanoparticles (AgNPs) are the most common materials in nanotechnology-based consumer products globally. Because of the wide application of AgNPs, their potential environmental impact is currently a highly topical focus of concern. Nitrification is one of the processes in the nitrogen cycle most susceptible to AgNPs but the specific effects of AgNPs on nitrification in aquatic environments are not well understood. We report the influence of AgNPs on nitrification and associated nitrous oxide (N 2 O) production in estuarine sediments. AgNPs inhibited nitrification rates, which decreased exponentially with increasing AgNP concentrations. The response of nitrifier N 2 O production to AgNPs exhibited low-dose stimulation (production could be enhanced by >100% at low doses of AgNPs. This result was confirmed by metatranscriptome studies showing up-regulation of nitric oxide reductase (norQ) gene expression in the low-dose treatment. Isotopomer analysis revealed that hydroxylamine oxidation was the main N 2 O production pathway, and its contribution to N 2 O emission was enhanced when exposed to low-dose AgNPs. This study highlights the molecular underpinnings of the effects of AgNPs on nitrification activity and demonstrates that the release of AgNPs into the environment should be controlled because they interfere with nitrifying communities and stimulate N 2 O emission.

Simplified modeling of simultaneous reaction kinetics of carbon oxidation and nitrification in biofilm processes

Energy Technology Data Exchange (ETDEWEB)

Tsuneda, S.; Auresenia, J.; Hibiya, K.; Hirata, A. [Waseda University, Department of Chemical Engineering, 3-4-1 Ohkubo, Shinjuku-ku, Tokyo 169-8555 (Japan)

2004-06-01

Batch experiments with varying initial substrate concentrations and biomass volumes were performed in a three-phase fluidized bed biofilm reactor treating simulated domestic wastewater to study the simultaneous carbon oxidation and nitrification in the biofilm process. A simplified mass balance equation for the biofilm was proposed and five different kinetic rate equations were used to match the actual data. The kinetic parameters were obtained by nonlinear regression analysis on a set of two differential equations representing the simultaneous carbon oxidation and nitrification. The competitive inhibition model incorporating the effects of total organic carbon (TOC) concentrations on nitrification rates was the best-suited model based on the average r{sup 2}. In this model, oxygen concentration and its affinity constants were not included. Instead, it was assumed that the rate of carbon oxidation is independent of the NH{sub 4}{sup +}-N, while nitrification is affected by TOC. The number of parameters was successfully minimized without reducing its ability to accurately predict the bulk concentration time course, which would reduce computational complexity and possibly enhance the availability for an actual wastewater treatment process. (Abstract Copyright [2004], Wiley Periodicals, Inc.)

Comparison of partial and full nitrification processes applied for treating high-strength nitrogen wastewaters: microbial ecology through nitrous oxide production.

Science.gov (United States)

Ahn, Joon Ho; Kwan, Tiffany; Chandran, Kartik

2011-04-01

The goal of this study was to compare the microbial ecology, gene expression, biokinetics, and N2O emissions from a lab-scale bioreactor operated sequentially in full-nitrification and partial-nitrification modes. Based on sequencing of 16S rRNA and ammonia monooxygenase subunit A (amoA) genes, ammonia oxidizing bacteria (AOB) populations during full- and partial-nitrification modes were distinct from one another. The concentrations of AOB (XAOB) and their respiration rates during full- and partial-nitrification modes were statistically similar, whereas the concentrations of nitrite oxidizing bacteria (XNOB) and their respiration rates declined significantly after the switch from full- to partial-nitrification. The transition from full-nitrification to partial nitrification resulted in a protracted transient spike of nitrous oxide (N2O) and nitric oxide (NO) emissions, which later stabilized. The trends in N2O and NO emissions correlated well with trends in the expression of nirK and norB genes that code for the production of these gases in AOB. Both the transient and stabilized N2O and NO emissions during partial nitrification were statistically higher than those during steady-state full-nitrification. Based on these results, partial nitrification strategies for biological nitrogen removal, although attractive for their reduced operating costs and energy demand, may need to be optimized against the higher carbon foot-print attributed to their N2O emissions.

Nitrification and N2O production processes in soil incubations after ammonium fertilizer application at high concentrations

Science.gov (United States)

Deppe, Marianna; Well, Reinhard; Giesemann, Anette; Flessa, Heinz

2016-04-01

High concentrations of ammonium as they occur, e.g., after point-injection of ammonium fertilizer solution according to the CULTAN fertilization technique may retard nitrification. Potential advantages in comparison to conventional fertilization include a higher N efficiency of crops, reduced nitrate leaching, and lower N2O and N2 emissions. Dynamics of nitrification due to plant uptake and dilution processes, leading to decreasing ammonium concentrations in fertilizer depots, has only poorly been studied before. Furthermore, there is little information about the relative contribution of different N2O production processes under these conditions. To elucidate the process dynamics a laboratory incubation study was conducted. After fertilization with ammonium sulfate at 5 levels (from 0 to 5000 mg NH4+-N kg-1; 20mg NO3--N kg-1 each), sandy loam soil was incubated in dynamic soil microcosms for 21 days. N2O, CH4 and CO2 fluxes as well as isotope signatures of N2O and, at three dates, NO3- and NH4+ were measured. To identify N2O production processes, acetylene inhibition (0.01 vol.%), 15N tracer approaches, and isotopomer data (15N site preference and δ18O) were used. N2O emissions were highest at 450mg NH4+-N kg-1 and declined with further increasing concentrations. At 5000 mg NH4+-N kg-1 nitrification was completely inhibited. However, approximately 90% of N2O production was inhibited by acetylene application, and there was no change in the relative contribution of nitrification and denitrification to N2O production with N level. Applying the non-equilibrium technique to our 15N tracer data revealed heterogeneous distribution of denitrification in soil, with at least two distinct NO3- pools, and spatial separation of NO3- formation and consumption. In comparison with the acetylene inhibition and 15N tracer approaches the results of the isotopomer approach were reasonable and indicated substantial contribution of nitrifier-denitrification (10-40%) to total N2O

Fluorescence Sensors for Early Detection of Nitrification in Drinking Water Distribution Systems - Interference Corrections and Feasibility Assessment

Science.gov (United States)

Do, T. D.; Pifer, A.; Chowdhury, Z.; Wahman, D.; Zhang, W.; Fairey, J.

2017-12-01

Detection of nitrification events in chloraminated drinking water distribution systems remains an ongoing challenge for many drinking water utilities, including Dallas Water Utilities (DWU) and the City of Houston (CoH). Each year, these utilities experience nitrification events that necessitate extensive flushing, resulting in the loss of billions of gallons of finished water. Biological techniques used to quantify the activity of nitrifying bacteria are impractical for real-time monitoring because they require significant laboratory efforts and/or lengthy incubation times. At present, DWU and CoH regularly rely on physicochemical parameters including total chlorine and monochloramine residual, and free ammonia, nitrite, and nitrate as indicators of nitrification, but these metrics lack specificity to nitrifying bacteria. To improve detection of nitrification in chloraminated drinking water distribution systems, we seek to develop a real-time fluorescence-based sensor system to detect the early onset of nitrification events by measuring the fluorescence of soluble microbial products (SMPs) specific to nitrifying bacteria. Preliminary data indicates that fluorescence-based metrics have the sensitivity to detect these SMPs in the early stages of nitrification, but several remaining challenges will be explored in this presentation. We will focus on benchtop and sensor results from ongoing batch and annular reactor experiments designed to (1) identify fluorescence wavelength pairs and data processing techniques suitable for measurement of SMPs from nitrification and (2) assess and correct potential interferences, such as those from monochloramine, pH, iron, nitrite, nitrate and humic substances. This work will serve as the basis for developing fluorescence sensor packages for full-scale testing and validation in the DWU and CoH systems. Findings from this research could be leveraged to identify nitrification events in their early stages, facilitating proactive

Effect of heavy metals on nitrification performance in different activated sludge processes

International Nuclear Information System (INIS)

You, Sheng-Jie; Tsai, Yung-Pin; Huang, Ru-Yi

2009-01-01

To understand the toxic effect of heavy metals on the nitrification mechanisms of activated sludge, this study identified the specific ammonia utilization rate (SAUR) inhibited by Pb, Ni and/or Cd shock loadings. Seven different heavy metal combinations (Pb, Ni, Cd, Pb + Ni, Ni + Cd, Pb + Cd, and Pb + Ni + Cd) with seven different heavy metal concentrations (0, 2, 5, 10, 15, 25, and 40 ppm, respectively) were examined by batch experiments, where the activated sludge was taken from either sequencing batch reactor (SBR) or anaerobic-anoxic-oxic (A 2 O) processes. The experimental results showed the SAUR inhibition rate was Ni > Cd > Pb. No significant inhibition in the nitrification reaction of the activated sludge was observed even when as much as 40 ppm Pb was added. In addition, no synergistic effect was found when different heavy metals were simultaneously added in different concentrations, and the overall inhibition effect depended on the heavy metal with the highest toxicity. Further, first order kinetic reaction could model the behavior of SAUR inhibition on activated sludge when adding heavy metals, and the SAUR inhibition formula was derived as SAUR=(SAUR max -SAUR min )xe -r i c +SAUR min . On the other hand, the heavy metal adsorption ability in both the activated sludge system was Pb = Cd > Ni. The specific adsorption capacity of activated sludge on heavy metal increased as the heavy metal concentration increased or the mixed liquid volatile suspended solid (MLVSS) decreased. The batch experiments also showed the heavy metal adsorption capacity of the SBR sludge was larger than the A 2 O sludge. Finally, the most predominant bacteria in the phylogenetic trees of SBR and A 2 O activated sludges were proteobacteria, which contributed to 42.1% and 42.8% of the total clones.

Ureic nitrogen transformation in multi-layer soil columns treated with urease and nitrification inhibitors.

Science.gov (United States)

Giovannini, Camilla; Garcia-Mina, Josè M; Ciavatta, Claudio; Marzadori, Claudio

2009-06-10

The use of N-(n-butyl)thiophosphoric triamide (NBPT), as a urease inhibitor, is one of the most successful strategies utilized to increase the efficiency of urea-based fertilization. To date, NBPT has been added to the soil incorporated in fertilizers containing either urea or the inhibitor at a fixed percentage on the urea weight. The possibility of using NBPT physically separated from urea-based fertilizers could make its use more flexible. In particular, a granulated product containing NBPT could be utilized in soils treated with different urea-based fertilizers including livestock urine, the amount depending on soil characteristics and/or the urea source (e.g., mineral fertilizer, organo-mineral fertilizer, or animal slurry). In this study, a multilayer soil column device was used to investigate the influence of an experimental granular product (RV) containing NBPT and a garlic extract, combining the ability to protect NBPT by oxidation and nitrification inhibition activity, on (a) spatial variability of soil urease and nitrification activities and (b) timing of urea hydrolysis and mineral-N form accumulation (NO(2)(-), NO(3)(-), NH(4)(+)) in soil treated with urea. The results clearly demonstrated that RV can, effectively, inhibit the soil urease activity along the soil column profile up to 8-10 cm soil layer depth and that the inhibition power of RV was dependent on time and soil depth. However, nitrification activity is not significantly influenced by RV addition. In addition, the soil N transformations were clearly affected by RV; in fact, RV retarded urea hydrolysis and reduced the accumulation of NH(4)(+)-N and NO(2)(-)-N ions along the soil profile. The RV product was demonstrated to be an innovative additive able to modify some key ureic N trasformation processes correlated with the efficiency of the urea-based fertilization, in a soil column higher than 10 cm.

Remediation of incomplete nitrification and capacity increase of biofilters at different drinking water treatment plants through copper dosing

DEFF Research Database (Denmark)

Wagner, Florian Benedikt; Borch Nielsen, Peter; Boe-Hansen, Rasmus

2018-01-01

Drinking water treatment plants based on groundwater may suffer from incomplete ammonium removal, which deteriorates drinking water quality and constrains water utilities in the operation of their plants. Ammonium is normally removed through nitrification in biological granular media filters...... groundwater treatment plants, all of which had displayed several years of incomplete nitrification. Plants exceeded the Danish national water quality standard of 0.05 mg NH4+/L by a factor of 2–12. Within only 2-3 weeks of dosing, ammonium removal rates increased significantly (up to 150%). Nitrification...... was fully established, with ammonium effluent concentrations of water chemistry, ammonium loading rates, filter design and operation, or treatment plant configuration. However, for filters without primary filtration, it took longer time...

Effect of heavy metals on nitrification activity as measured by RNA- and DNA-based function-specific assays

Science.gov (United States)

Heavy metals can inhibit nitrification, a key process for nitrogen removal in wastewater treatment. The transcriptional responses of functional genes (amoA, hao, nirK and norB) were measured in conjunction with specific oxygen uptake rate (sOUR) for nitrifying enrichment cultures...

Molecular biological and isotopic biogeochemical prognoses of the nitrification-driven dynamic microbial nitrogen cycle in hadopelagic sediments.

Science.gov (United States)

Nunoura, Takuro; Nishizawa, Manabu; Kikuchi, Tohru; Tsubouchi, Taishi; Hirai, Miho; Koide, Osamu; Miyazaki, Junichi; Hirayama, Hisako; Koba, Keisuke; Takai, Ken

2013-11-01

There has been much progress in understanding the nitrogen cycle in oceanic waters including the recent identification of ammonia-oxidizing archaea and anaerobic ammonia oxidizing (anammox) bacteria, and in the comprehensive estimation in abundance and activity of these microbial populations. However, compared with the nitrogen cycle in oceanic waters, there are fewer studies concerning the oceanic benthic nitrogen cycle. To further elucidate the dynamic nitrogen cycle in deep-sea sediments, a sediment core obtained from the Ogasawara Trench at a water depth of 9760 m was analysed in this study. The profiles obtained for the pore-water chemistry, and nitrogen and oxygen stable isotopic compositions of pore-water nitrate in the hadopelagic sediments could not be explained by the depth segregation of nitrifiers and nitrate reducers, suggesting the co-occurrence of nitrification and nitrate reduction in the shallowest nitrate reduction zone. The abundance of SSU rRNA and functional genes related to nitrification and denitrification are consistent with the co-occurrence of nitrification and nitrate reduction observed in the geochemical analyses. This study presents the first example of cooperation between aerobic and anaerobic nitrogen metabolism in the deep-sea sedimentary environments. © 2013 Society for Applied Microbiology and John Wiley & Sons Ltd.

Decreased Soil Nitrification Rate with Addition of Biochar to Acid Soils

Institute of Scientific and Technical Information of China (English)

Shiyu LI; Xiangshu DONG; Dandan LIU; Li LIU; Feifei HE

2017-01-01

This study was conducted to investigate the effects of mixed biochar on the nitrification rate in acidic soils. A 15N tracer experiment with (15NH4)2SO4 was conducted to determine the nitrification rates of 4 acidic agricultural soils with pH 4.03-6.02in Yunnan Province, Southern China. The accumulation of 15N-NO3 - and nitrification rates decreased with the addition of biochar at the end of incubation, suggesting that biochar could be a nitrification inhibitor in acidic fertilized soil. Nitrification rates in soil with pH 4.03 were evidently lower than those in soil with pH 4.81 -6.02 with or without biochar. Decreased nitrification rates were detected in the acidic soils with biochar. Soil pH controlled nitrification more than biochar in certain strongly acidic soils.

Fundamentals and control of nitrification in chloraminated drinking water distribution systems

National Research Council Canada - National Science Library

American Water Works Association

2006-01-01

... Introduction, 25 Nitrification in Drinking Water Distribution System, 25 Nitrification in Pipelines and Effects of Biofilms, 31 Nitrification in Water Storage Facilities, 34 Conclusions, 39 Refere...

Biodegradation of plastics in soil and effects on nitrification activity. A laboratory approach.

Directory of Open Access Journals (Sweden)

Giulia eBettas Ardisson

2014-12-01

Full Text Available The progressive application of new biodegradable plastics in agriculture calls for improved testing approaches to assure their environmental safety. Full biodegradation (≥ 90% prevents accumulation in soil, which is the first tier of testing. The application of specific ecotoxicity tests is the second tier of testing needed to show safety for the soil ecosystem. Soil microbial nitrification is widely used as a bioindicator for evaluating the impact of chemicals on soil but it is not applied for evaluating the impact of biodegradable plastics. In this work the International Standard test for biodegradation of plastics in soil (ISO 17556, 2012 was applied both to measure biodegradation and to prepare soil samples needed for a subsequent nitrification test based on another International Standard (ISO 14238, 2012. The plastic mulch film tested in this work showed full biodegradability and no inhibition of the nitrification potential of the soil in comparison with the controls. The laboratory approach suggested in this Technology Report enables (i to follow the course of biodegradation, (ii a strict control of variables and environmental conditions, (iii the application of very high concentrations of test material (to maximize the possible effects. This testing approach could be taken into consideration in improved testing schemes aimed at defining the biodegradability of plastics in soil.

Biodegradation of plastics in soil and effects on nitrification activity. A laboratory approach.

Science.gov (United States)

Bettas Ardisson, Giulia; Tosin, Maurizio; Barbale, Marco; Degli-Innocenti, Francesco

2014-01-01

The progressive application of new biodegradable plastics in agriculture calls for improved testing approaches to assure their environmental safety. Full biodegradation (≥90%) prevents accumulation in soil, which is the first tier of testing. The application of specific ecotoxicity tests is the second tier of testing needed to show safety for the soil ecosystem. Soil microbial nitrification is widely used as a bioindicator for evaluating the impact of chemicals on soil but it is not applied for evaluating the impact of biodegradable plastics. In this work the International Standard test for biodegradation of plastics in soil (ISO 17556, 2012) was applied both to measure biodegradation and to prepare soil samples needed for a subsequent nitrification test based on another International Standard (ISO 14238, 2012). The plastic mulch film tested in this work showed full biodegradability and no inhibition of the nitrification potential of the soil in comparison with the controls. The laboratory approach suggested in this Technology Report enables (i) to follow the course of biodegradation, (ii) a strict control of variables and environmental conditions, (iii) the application of very high concentrations of test material (to maximize the possible effects). This testing approach could be taken into consideration in improved testing schemes aimed at defining the biodegradability of plastics in soil.

Nitrification in Chloraminated Drinking Water Distribution Systems - Occurrence

Science.gov (United States)

This chapter discusses available information on nitrification occurrence in drinking water chloraminated distribution systems. Chapter 4 provides an introduction to causes and controls for nitrification in chloraminated drinking water systems. Both chapters are intended to serve ...

Nitrogen Removal Characteristics of Pseudomonas putida Y-9 Capable of Heterotrophic Nitrification and Aerobic Denitrification at Low Temperature

Directory of Open Access Journals (Sweden)

Yi Xu

2017-01-01

Full Text Available The cold-adapted bacterium Pseudomonas putida Y-9 was investigated and exhibited excellent capability for nitrogen removal at 15°C. The strain capable of heterotrophic nitrification and aerobic denitrification could efficiently remove ammonium, nitrate, and nitrite at an average removal rate of 2.85 mg, 1.60 mg, and 1.83 mg NL−1 h−1, respectively. Strain Y-9 performed nitrification in preference to denitrification when ammonium and nitrate or ammonium and nitrite coexisted in the solution. Meantime, the presence of nitrate had no effect on the ammonium removal rate of strain Y-9, and yet the presence of high concentration of nitrite would inhibit the cell growth and decrease the nitrification rate. The experimental results indicate that P. putida Y-9 has potential application for the treatment of wastewater containing high concentrations of ammonium along with its oxidation products at low temperature.

Testing of Biologically Inhibiting Surface

DEFF Research Database (Denmark)

Bill Madsen, Thomas; Larsen, Erup

2003-01-01

The main purpose of this course is to examine a newly developed biologically inhibiting material with regards to galvanic corrosion and electrochemical properties. More in detail, the concern was how the material would react when exposed to cleaning agents, here under CIP cleaning (Cleaning...

Inhibition of bacterial ammonia oxidation by organohydrazines in soil microcosms

Directory of Open Access Journals (Sweden)

Yucheng eWu

2012-01-01

Full Text Available Hydroxylamine oxidation by hydroxylamine oxidoreductase (HAO is a key step for energy-yielding in support of the growth of ammonia-oxidizing bacteria (AOB. Organohydrazines have been shown to inactivate HAO from Nitrosomonas europaea, and may serve as selective inhibitors to differentiate bacterial from archaeal ammonia oxidation due to the absence of bacterial HAO gene homologue in known ammonia-oxidizing archaea (AOA. In this study, the effects of three organohydrazines on activity, abundance and composition of AOB and AOA were evaluated in soil microcosms. The results indicate that phenylhydrazine and methylhydrazine at the concentration of 100 mol per gram dry weight soil completely suppressed the activity of soil nitrification. DGGE fingerprinting and sequencing analysis of bacterial ammonia monooxygenase subunit A gene (amoA clearly demonstrated that nitrification activity change is well paralleled with the growth of Nitrosomonas europaea-like AOB in soil microcosms. No significant correlation between AOA community structure and nitrification activity was observed among all treatments during the incubation period, although incomplete inhibition of nitrification activity occurred in 2-hydroxyethylhydrazine-amended soil microcosms. These findings show that the HAO-targeted organohydrazines can effectively inhibit bacterial nitrification in soil, and the mechanism of organohydrazine affecting AOA remains unclear.

Effects of pH and seasonal temperature variation on simultaneous partial nitrification and anammox in free-water surface wetlands.

Science.gov (United States)

He, Yuling; Tao, Wendong; Wang, Ziyuan; Shayya, Walid

2012-11-15

Design considerations to enhance simultaneous partial nitrification and anammox in constructed wetlands are largely unknown. This study examined the effects of pH and seasonal temperature variation on simultaneous partial nitrification and anammox in two free-water surface wetlands. In order to enhance partial nitrification and inhibit nitrite oxidation, furnace slag was placed on the rooting substrate to maintain different pH levels in the wetland water. The wetlands were batch operated for dairy wastewater treatment under oxygen-limited conditions at a cycle time of 7 d. Fluorescence in situ hybridization analysis found that aerobic ammonium oxidizing bacteria and anammox bacteria accounted for 42-73% of the bacterial populations in the wetlands, which was the highest relative abundance of ammonium oxidizing and anammox bacteria in constructed wetlands enhancing simultaneous partial nitrification and anammox. The two wetlands removed total inorganic nitrogen efficiently, 3.36-3.38 g/m(2)/d in the warm season with water temperatures at 18.9-24.9 °C and 1.09-1.50 g/m(2)/d in the cool season at 13.8-18.9 °C. Plant uptake contributed 2-45% to the total inorganic nitrogen removal in the growing season. A seasonal temperature variation of more than 6 °C would affect simultaneous partial nitrification and anammox significantly. Significant pH effects were identified only when the temperatures were below 18.9 °C. Anammox was the limiting stage of simultaneous partial nitrification and anammox in the wetlands. Water pH should be controlled along with influent ammonium concentration and temperature to avoid toxicity of free ammonia to anammox bacteria. Copyright © 2012 Elsevier Ltd. All rights reserved.

Detoxification of Pesticide-Containing Wastewater with FeIII, Activated Carbon and Fenton Reagent and Its Control Using Three Standardized Bacterial Inhibition Tests

Directory of Open Access Journals (Sweden)

Eduard Rott

2017-12-01

Full Text Available Discharge of toxic industrial wastewaters into biological wastewater treatment plants may result in inhibition of activated sludge bacteria (ASB. In order to find an appropriate method of detoxification, the wastewater of a pesticide-processing plant in Vietnam was treated with three different methods (FeIII, powdered activated carbon (PAC, Fenton (FeII/H2O2 analyzing the detoxification effect with the nitrification inhibition test (NIT, respiration inhibition test (RIT and luminescent bacteria test (LBT. The heterotrophic ASB were much more resistant to the wastewater than the autotrophic nitrificants. The NIT turned out to be more suitable than the RIT since the NIT was less time-consuming and more reliable. In addition, the marine Aliivibrio fischeri were more sensitive than the nitrificants indicating that a lack of inhibition in the very practical and time-efficient LBT correlates with a lack of nitrification inhibition. With 95%, the Fenton method showed the highest efficiency regarding the chemical oxygen demand (COD removal. Although similar COD removal (60–65% was found for both the FeIII and the PAC method, the inhibitory effect of the wastewater was reduced much more strongly with PAC. Both the NIT and the LBT showed that the PAC and Fenton methods led to a similar reduction in the inhibitory effect.

Nitrous oxide production during nitrification from organic solid waste under temperature and oxygen conditions.

Science.gov (United States)

Nag, Mitali; Shimaoka, Takayuki; Komiya, Teppei

2016-11-01

Landfill aeration can accelerate the biological degradation of organic waste and reduce methane production; however, it induces nitrous oxide (N2O), a potent greenhouse gas. Nitrification is one of the pathways of N2O generation as a by-product during aerobic condition. This study was initiated to demonstrate the features of N2O production rate from organic solid waste during nitrification under three different temperatures (20°C, 30°C, and 40°C) and three oxygen concentrations (5%, 10%, and 20%) with high moisture content and high substrates' concentration. The experiment was carried out by batch experiment using Erlenmeyer flasks incubated in a shaking water bath for 72 h. A duplicate experiment was carried out in parallel, with addition of 100 Pa of acetylene as a nitrification inhibitor, to investigate nitrifiers' contribution to N2O production. The production rate of N2O ranged between 0.40 × 10(-3) and 1.14 × 10(-3) mg N/g-DM/h under the experimental conditions of this study. The rate of N2O production at 40°C was higher than at 20°C and 30°C. Nitrification was found to be the dominant pathway of N2O production. It was evaluated that optimization of O2 content is one of the crucial parameters in N2O production that may help to minimize greenhouse gas emissions and N turnover during aeration.

[Temporal-spatial distribution of agricultural diffuse nitrogen pollution and relationship with soil respiration and nitrification].

Science.gov (United States)

Wei, Ouyang; Cai, Guan-Qing; Huang, Hao-Bo; Geng, Xiao-Jun

2014-06-01

The soil respiration, nitrification and denitrification processes play an important role on soil nitrogen transformation and diffuse nitrogen loading. These processes are also the chains for soil circle. In this study, the Zhegao watershed located north of Chaohu Lake was selected to explore the interactions of these processes with diffuse nitrogen pollution. The BaPS (Barometric Process Separation) was applied to analyze the soil respiration, nitrification and denitrification processes in farmland and forest. The SWAT (Soil and Water Assessment Tool) simulated the temporal and spatial pattern of diffuse nitrogen loading. As the expanding of farmland and higher level of fertilization, the yearly mean loading of diffuse nitrogen increased sustainably from 1980-1995 to 1996-2012. The monthly loading in 1996-2012 was also higher than that in the period of 1980-1995, which closely related to the precipitation. The statistical analysis indicated that there was a significant difference between two periods. The yearly averaged loading of the whole watershed in 1996-2012 was 10.40 kg x hm(-2), which was 8.10 kg x hm(-2) in 1980-1995. The variance analysis demonstrated that there was also a big difference between the spatial distributions of two periods. The forest soil had much higher soil respiration than the farmland soil. But the farmland had higher nitrification and denitrification rates. The more intensive nitrogen transformation in the farmland contributed to the less diffuse nitrogen loading. As the nitrification rate of farmland was higher than denitrification rate, agricultural diffuse nitrate nitrogen loading would increase and organic nitrogen loading would reduce. The analysis of soil respiration, nitrification and denitrification is helpful for the study of soil nitrogen circle form the aspect of soil biology, which also benefits the control of agricultural diffuse nitrogen pollution.

Nitrification in Chloraminated Drinking Water Distribution Systems: Factors Affecting Occurrence

Science.gov (United States)

Drinking water distribution systems with ammonia present from either naturally occurring ammonia or ammonia addition during chloramination are at risk for nitrification. Nitrification in drinking water distribution systems is undesirable and may result in water quality degradatio...

Conditions and mechanisms affecting simultaneous nitrification and denitrification in a Pasveer oxidation ditch

NARCIS (Netherlands)

Hao, X.; Doddema, H.J.; Groenestijn, J.W. van

1997-01-01

Simultaneous nitrification and denitrification in a Pasveer oxidation ditch was studied. The purpose was to evaluate the performances of both nitrification and dentrification in oxidation ditches, and to pursue some possible approaches to enhance nitrogen removal. Almost complete nitrification was

Simultaneous nitrification, denitrification and phosphorus removal (SNDPR) in a full-scale water reclamation plant located in warm climate.

Science.gov (United States)

Yang, Qin; Shen, Nan; Lee, Zarraz M-P; Xu, Guangjing; Cao, Yeshi; Kwok, Beehong; Lay, Winson; Liu, Yu; Zhou, Yan

The combination of simultaneous nitrification-denitrification (SND) with enhanced biological phosphorus removal (EBPR) provides a more efficient and economically viable option for nutrient removal from municipal wastewater compared to conventional two-step nitrification-denitrification. This study analyzed the nutrients (N and P) profiles in a full-scale municipal wastewater reclamation plant (WRP) located in the tropical region, in which more than 90% of nitrogen was removed. Interestingly, average SND efficiency in aerobic zones was found to be up to 50%, whereas phosphorus profile displayed a clear cyclic release and uptake pattern with a phosphorus removal efficiency of up to 76%. The capability of sludge to perform SND and EBPR was further confirmed through a series of batch experiments. Microbial analysis revealed the presence of Accumulibacter and Tetrasphaera phosphate accumulating organisms in the plant, while few glycogen accumulating organisms (GAO) was observed. This study showed the significant occurrence of combined SND and EBPR, known as simultaneous nitrification, denitrification and phosphorus removal (SNDPR), in the studied WRP under warm climate. The possible causes behind the observed SNDPR were also discussed.

Oxygen Isotope Composition of Nitrate Produced by Freshwater Nitrification

Science.gov (United States)

Boshers, D.; Granger, J.; Bohlke, J. K.

2016-12-01

Measurements of the naturally occurring nitrogen and oxygen stable isotope ratios of nitrate (NO3-), δ15N and δ18O, can be used to determine the source, dispersal, and fate of natural and contaminant NO3- in aquatic environments. To this end, it is necessary to know the extent to which NO3- isotopologues are modified by biological reactions, as heavy and light isotopes have different reaction rates. The purpose of this study was to determine the influence of the δ18O of ambient water on the isotope composition of NO3- produced during nitrification, the biological oxidation of ammonium (NH4+) to nitrite (NO2-) and then NO3-, which is poorly constrained in freshwater systems. To determine the δ18O of NO3- produced by nitrification in freshwater, we collected water from a stream in New England, which we amended with NH4+ and with increments of 18O-enriched water, to monitor the isotope composition of NO3- produced by a natural consortium of nitrifiers. Added NH4+ was completely oxidized to NO3- over 26 days. The final δ18O of nitrified NO3- revealed sensitivity to the δ18O of water mediated by (a) isotopic equilibration between water and NO2- and (b) kinetic isotope fractionation during O-atom incorporation from water into NO2- and NO3-. Our results concur with nitrifying culture experiments that have demonstrated analogous sensitivity of the δ18O of nitrified NO3- to equilibrium and kinetic O isotope effects (Buchwald et al. 2012), as well as show that these dynamics need to be considered to interpret NO3- isotope distribution in freshwater environments.

Complete nutrient recovery from source-separated urine by nitrification and distillation.

Science.gov (United States)

Udert, K M; Wächter, M

2012-02-01

In this study we present a method to recover all nutrients from source-separated urine in a dry solid by combining biological nitrification with distillation. In a first process step, a membrane-aerated biofilm reactor was operated stably for more than 12 months, producing a nutrient solution with a pH between 6.2 and 7.0 (depending on the pH set-point), and an ammonium to nitrate ratio between 0.87 and 1.15 gN gN(-1). The maximum nitrification rate was 1.8 ± 0.3 gN m(-2) d(-1). Process stability was achieved by controlling the pH via the influent. In the second process step, real nitrified urine and synthetic solutions were concentrated in lab-scale distillation reactors. All nutrients were recovered in a dry powder except for some ammonia (less than 3% of total nitrogen). We estimate that the primary energy demand for a simple nitrification/distillation process is four to five times higher than removing nitrogen and phosphorus in a conventional wastewater treatment plant and producing the equivalent amount of phosphorus and nitrogen fertilizers. However, the primary energy demand can be reduced to values very close to conventional treatment, if 80% of the water is removed with reverse osmosis and distillation is operated with vapor compression. The ammonium nitrate content of the solid residue is below the limit at which stringent EU safety regulations for fertilizers come into effect; nevertheless, we propose some additional process steps that will increase the thermal stability of the solid product. Copyright © 2011 Elsevier Ltd. All rights reserved.

Regulation and role of epiphytic nitrification and denitrification in macrophyte-dominated systems

Energy Technology Data Exchange (ETDEWEB)

Eriksson, Peder G.

2000-02-01

This thesis examines mechanisms regulating bacterial nitrification and denitrification in attached microbial communities on surfaces of aquatic macrophytes. It also evaluates the role of epiphytic nitrification and denitrification for the nitrogen turnover in macrophyte-dominated nutrient-rich freshwater. Epiphytic nitrification is promoted in light and epiphytic denitrification occurs mainly in dark, because the metabolic activity of the aquatic macrophyte and its epiphytes induce in light high and in dark low oxygen concentrations in epiphytic communities. Epiphytic nitrification and denitrification are also affected by the physical and chemical characteristics of the aquatic macrophyte. The spatial distribution of nitrification in emergent macrophyte wetlands is related to the species composition of the emergent vegetation, possibly because of a macrophyte species-related release of organic nitrification inhibitors. Contrasting to nitrifying bacteria, which are lithotrophic, denitrifying bacteria use organic substances as an energy source and are therefore stimulated by the release of organic matter from aquatic macrophytes. Epiphytic communities support more denitrification in nutrient-rich than in nutrient-poor environments. In lakes and ponds, epiphytic denitrification is higher at sheltered locations than at locations exposed to wind-induced water movements or currents. In flowing water, epiphytic denitrification occurs mainly at low oxygen concentrations in the surrounding water. However, because aquatic macrophytes impede water flow and induce low oxygen concentrations in dark, epiphytic denitrification can be present within dense vegetation despite of high oxygen concentrations in the surrounding water. Epiphytic nitrification is almost unaffected by flow conditions, and can occur both in light and in dark. In shallow-water systems such as treatment wetlands, aquatic macrophytes often provide most of the accessible surface area for attached nitrifying and

The herbicide Glyphosate affects nitrification in the Elbe estuary, Germany

Science.gov (United States)

Sanders, Tina; Lassen, Stephan

2015-04-01

The Elbe River is one of the biggest European rivers discharging into the North Sea. It also transports high amounts of nutrients and pollutants like pesticides. Important source regions of both nutrients and pollutants are located within the river catchment, which is dominated by agricultural land-use. From these agricultural soils, pesticides can be carried via the river and estuary into the North Sea. Glyphosate (N-(phosphonomethyl) glycine) is the most commonly used herbicide worldwide and mainly used to regulate unwanted plant growth and for the expedition of crop ripening. In Germany, ~ 6000 tons of glyphosate are applied yearly in agriculture and private use. Glyphosate is degradable by microorganisms and has a half-life in water of 35 to 60 days. This herbicide specifically inhibits 5-enolpyruvylshikimate-3-phosphate synthase (EPSPS), an enzyme that catalyzes the biosynthesis of essential aromatic amino acids in plants, fungi, and bacteria. Nitrifying bacteria, which play an important role in the internal nitrogen cycling in the Elbe estuary, also possess this enzyme. The aim of our study was to quantify the concentration of glyphosate in water and sediment samples of the Elbe to get an overview about relevant environmental levels and to assess the impact of glyphosate on inhibition of nitrifying activities. To quantify the effect of glyphosate on nitrification activity, natural samples as well as pure cultures of Nitrosomonas europea (strain Nm50) were incubated with different concentrations of glyphosate over a period of some weeks. The nitrifying activity was determined according to changes of the nitrite and nitrate concentration as well as the cell number. Glyphosate was detectable in water and sediment samples in the Elbe estuary with up to 5 ppb mainly in the Port of Hamburg region. In both incubation experiments an inhibiting effect of glyphosate on nitrification could be shown. The incubated natural water sample was affected by a glyphosate

A dynamic model for the nitrification of higher concentrated wastewaters and control by experiments; Ein dynamisches Prozessmodell fuer die Nitrifikation hoeher belasteter Abwaesser und praktische Anwendungen

Energy Technology Data Exchange (ETDEWEB)

Pirsing, A. [Siemens AG, Anlagentechnik ANL A73, Karlsruhe (Germany); Wiesmann, U. [Inst. fuer Verfahrenstechnik, Technische Univ. Berlin (Germany)

1995-07-01

Wastewater with high ammonia concentration is produced by many industries. However, the removal of higher loaded industrial effluents still poses many questions. Dynamic modelling is helpful to understand the process of nitrification and to investigate algorithms of process control. Therefore, a dynamic model of nitrification in completely mixed reactors is proposed based on mass balances for the components ammonia, nitrite, nitrate, dissolved oxygen, carbon dioxide, pH, nitrosomonas and nitrobacter. The biological reaction rates consider oxygen limitation and substrate inhibition. The process model presented it tested by lab scale experiments using an aerated stirred tank reactor. (orig.) [Deutsch] Es wird ein mathematisches Prozessmodell fuer die Nitrifikation von Industrieabwaessern mit hoher Ammoniumkonzentration vorgestellt, das bislang vernachlaessigte Phaenomene wie z.B. Substratueberschusshemmung und Sauerstofflimitierung beruecksichtigt. Als theoretische Grundlage dienen Bilanzgleichungen fuer insgesamt acht Komponenten. Das Simulationsmodell wird durch den Vergleich mit experimentellen Ergebnissen aus einer Laborversuchsanlage auf seine Richtigkeit ueberprueft. In dem Beitrag werden auf diesem Modell basierende Anwendungsbeispiele behandelt. So werden die Moeglichkeiten der dynamischen Prozesssimulation zur Steigerung der Betriebsstabilitaet bei schwankenden Zulaufkonzentrationen und -volumenstroemen gezeigt. Darueber hinaus gelingt die Rekonstruktion der Umsatzraten r(O{sub 2}) und r(NH{sub 3}) aus der Sauerstoff- und Kohlendioxidkonzentration in der Abluft. (orig.)

Heterogeneous Nitrification in a Full Scale Rapid Sand Filter Treating Groundwater

DEFF Research Database (Denmark)

Lopato, Laure; Röttgers, Nina; Binning, Philip John

2013-01-01

Experiments were conducted to determine ammonium removal kinetics in an operating biologically active sand filter at a waterworks treating anaerobic groundwater. The ammonium load varied between 0.7 and 3 g N/h/m2 (concentration ranged from 0.23 to 0.78 mg N/l) and the inlet water flux varied...... nitrification rate constant was closely related to the water pore velocity which implies that the rate is strongly determined by the resistance to mass transport in the diffusion boundary layer around the sand grains. Read More: http://ascelibrary.org/doi/abs/10.1061/%28ASCE%29EE.1943-7870.0000653...

Contributions of ammonia-oxidizing archaea and bacteria to nitrification in Oregon forest soils

Science.gov (United States)

Xinda Lu; Peter J. Bottomley; David D. Myrold

2015-01-01

Ammonia oxidation, the first step of nitrification, is mediated by both ammonia-oxidizing archaea (AOA) and bacteria (AOB); however, the relative contributions of AOA and AOB to soil nitrification are not well understood. In this study we used 1-octyne to discriminate between AOA-and AOB-supported nitrifi-cation determined both in soil-water slurries and in unsaturated...

Full-scale trials of external nitrification on plastic media nitrifying ...

African Journals Online (AJOL)

The apparent ammonia nitrification rate (ApANR, gN/m2 media surface∙d) of the NTF was sensitive to ... est in integrating them with NDBEPRAS systems in an external nitrification flow scheme ... The NTF tower was tested over a period of 2 years (Sept 05 to Sept 07) to ...... leak badly, in particular at high HLRs. References.

Relationship between respiratory quotient, nitrification, and nitrous oxide emissions in a forced aerated composting process

Energy Technology Data Exchange (ETDEWEB)

Tsutsui, Hirofumi, E-mail: jm-tsutsuih@kochi-u.ac.jp [Research and Education Faculty, Natural Sciences Cluster, Agriculture Unit, Kochi University, B200 Monobe, Nankoku, Kochi (Japan); Japan Science and Technology Agency, CREST (Japan); Fujiwara, Taku [Research and Education Faculty, Natural Sciences Cluster, Agriculture Unit, Kochi University, B200 Monobe, Nankoku, Kochi (Japan); Japan Science and Technology Agency, CREST (Japan); Inoue, Daisuke [Department of Health Science, School of Allied Health Sciences, Kitasato University, 1-15-1 Kitasato, Sagamihara-Minami, Kanagawa (Japan); Japan Science and Technology Agency, CREST (Japan); Ito, Ryusei [Department of Environmental Engineering, Graduate School of Engineering, Hokkaido University, Kita-13, Nishi-8, Kita-ku, Sapporo, Hokkaido (Japan); Japan Science and Technology Agency, CREST (Japan); Matsukawa, Kazutsugu [Research and Education Faculty, Multidisciplinary Science Cluster, Life and Environmental Medicine Science Unit, Kochi University, B200 Monobe, Nankoku, Kochi (Japan); Japan Science and Technology Agency, CREST (Japan); Funamizu, Naoyuki [Department of Environmental Engineering, Graduate School of Engineering, Hokkaido University, Kita-13, Nishi-8, Kita-ku, Sapporo, Hokkaido (Japan); Japan Science and Technology Agency, CREST (Japan)

2015-08-15

Highlights: • RQ can be an indicator of N{sub 2}O emission in forced aerated composting process. • Emission of N{sub 2}O with nitrification was observed with RQ decrease. • Mass balances demonstrated the RQ decrease was caused by nitrification. • Conversion ratio of oxidized ammonia and total N to N{sub 2}O were ∼2.7%. - Abstract: We assessed the relationship between respiratory quotient (RQ) and nitrification and nitrous oxide (N{sub 2}O) emission in forced aerated composting using lab-scale reactors. Relatively high RQ values from degradation of readily degradable organics initially occurred. RQ then stabilized at slightly lower values, then decreased. Continuous emission of N{sub 2}O was observed during the RQ decrease. Correlation between nitrification and N{sub 2}O emission shows that the latter was triggered by nitrification. Mass balances demonstrated that the O{sub 2} consumption of nitrification (∼24.8 mmol) was slightly higher than that of CO{sub 2} emission (∼20.0 mmol), indicating that the RQ decrease was caused by the occurrence of nitrification. Results indicate that RQ is a useful index, which not only reflects the bioavailability of organics but also predicts the occurrence of nitrification and N{sub 2}O emission in forced aerated composting.

Partial nitrification of non-ammonium-rich wastewater within biofilm filters under ambient temperature.

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Wang, Hongyu; He, Jiajie; Yang, Kai

2010-01-01

This study evaluated the partial nitrification performances of two biofilm filters over a synthetic non-ammonium-rich wastewater at a 20°C room temperature under both limited DO (∼2.0 mg/L) and unlimited DO (∼4.0 mg/L) conditions. The two filters were each of 80 cm long and used different biofilm carriers: activated carbon and ceramic granule. Results showed that partial nitrification was accomplished for both filters under the limited DO condition. However, the effluent NO(2)-N was higher in the ceramic granule filter than in the activated carbon filter, and was less susceptible to the influent COD/N changes. Further investigation into the water phase COD and NH(4)-N depth profiles and bacteria population within the two filters showed that by putting upper filter layer (upstream) to confront relatively higher influent COD/N ratios, the filtration process naturally put lower filter layers (downstream) relatively more favorable for nitrifying bacteria (ammonia oxidizing bacteria in this study) to prosper, making the filter depth left for nitrification a crucial factor for the effectiveness of nitrification with a filter. The potentially different porous flow velocities of the two filters might be the reason to cause their different partial nitrification performances, with a lower porous flow velocity (the ceramic granule filter) favoring partial nitrification more. In summation, DO, filter depth, and filtration speed should be played together to successfully operate a biofilm filter for partial nitrification.

A New Approach for Biologically-Inhibiting Surfaces

DEFF Research Database (Denmark)

Møller, Per; Hilbert, Lisbeth Rischel; Corfitzen, Charlotte B.

2007-01-01

in nanometers. Due to the difference in potentials, the biologically-inhibiting material will act as a galvanic element in contact with an electrolyte. The electrochemical processes taking place at the metal surface seem to exhibit a catalytic oxidation character more than an oligomeric effect from the silver....

Nitrification and the ammonia-oxidizing communities in the central Baltic Sea water column

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Jäntti, Helena; Ward, Bess B.; Dippner, Joachim W.; Hietanen, Susanna

2018-03-01

The redoxclines that form between the oxic and anoxic water layers in the central Baltic Sea are sites of intensive nitrogen cycling. To gain better understanding of nitrification, we measured the biogeochemical properties along with potential nitrification rates and analyzed the assemblages of ammonia-oxidizing bacteria and archaea using functional gene microarrays. To estimate nitrification in the entire water column, we constructed a regression model for the nitrification rates and applied it to the conditions prevailing in the area in 2008-2012. The highest ammonia oxidation rates were found in a thin layer at the top of the redoxcline and the rates quickly decreased below detection limit when oxygen was exhausted. This is probably because extensive suboxic layers, which are known to harbor pelagic nitrification, are formed only for short periods after inflows in the Baltic Sea. The nitrification rates were some of the highest measured in the water columns, but the thickness of the layer where conditions were favorable for nitrification, was very small and it remained fairly stable between years. However, the depth of the nitrification layer varied substantially between years, particularly in the eastern Gotland Basin (EGB) due to turbulence in the water column. The ammonia oxidizer communities clustered differently between the eastern and western Gotland Basin (WGB) and the composition of ammonia-oxidizing assemblages correlated with the environmental variables. The ammonia oxidizer community composition was more even in the EGB, which may be related to physical instability of the redoxcline that does not allow predominance of a single archetype, whereas in the WGB, where the position of the redoxcline is more constant, the ammonia-oxidizing community was less even. Overall the ammonia-oxidizing communities in the Baltic Sea redoxclines were very evenly distributed compared to other marine environments where microarrays have been applied previously.

An Operations Manual for Achieving Nitrification in an Activated Sludge Plant.

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Ontario Ministry of the Environment, Toronto.

In Ontario, the attainment of nitrification (oxidation of ammonia) in activated sludge plants is receiving increased attention. Nitrification of waste water is a necessary requirement because it reduces plant discharge of nitrogenous oxygen demand and/or toxic ammonia. However, this new requirement will result in added responsibility for…

Use of bioreactor landfill for nitrogen removal to enhance methane production through ex situ simultaneous nitrification-denitrification and in situ denitrification.

Science.gov (United States)

Sun, Xiaojie; Zhang, Hongxia; Cheng, Zhaowen

2017-08-01

High concentrations of nitrate-nitrogen (NO 3 - -N) derived from ex situ nitrification phase can inhibit methane production during ex situ nitrification and in situ denitrification bioreactor landfill. A combined process comprised of ex situ simultaneous nitrification-denitrification (SND) in an aged refuse bioreactor (ARB) and in situ denitrification in a fresh refuse bioreactor (FRB) was conducted to reduce the negative effect of high concentrationsof NO 3 - -N. Ex situ SND can be achieved because NO 3 - -N concentration can be reduced and the removal rate of ammonium-nitrogen (NH 4 + -N) remains largely unchanged when the ventilation rate of ARB-A2 is controlled. The average NO 3 - -N concentrations of effluent were 470mg/L in ex situ nitrification ARB-A1 and 186mg/L in ex situ SND ARB-A2. The average NH 4 + -N removal rates of ARB-A1 and ARB-A2 were 98% and 94%, respectively. Based on the experimental data from week 4 to week 30, it is predicted that NH 4 + -N concentration in FRB-F1 of the ex situ nitrification and in situ denitrification process would reach 25mg/L after 63weeks, and about 40weeks for the FRB-F2 of ex situ SND and in situ denitrification process . Ex situ SND and in situ denitrification process can improve themethane production of FRB-F2. The lag phase time of methane production for the FRB-F2 was 11weeks. This phase was significantly shorter than the 15-week phases of FRB-F1 in ex situ nitrification and in situ denitrification process. A seven-week stabilizationphase was required to increase methane content from 5% to 50% for FRB-F2. Methane content in FRB-F1 did not reach 50% but reached the 45% peak after 20weeks. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effect of Potassium Chlorate on the Treatment of Domestic Sewage by Achieving Shortcut Nitrification in a Constructed Rapid Infiltration System

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Qinglin Fang

2018-04-01

Full Text Available A constructed rapid infiltration (CRI system is a new type of sewage biofilm treatment technology, but due to its anaerobic zone it lacks the carbon sources and the conditions for nitrate retention, and its nitrogen removal performance is very poor. However, a shortcut nitrification–denitrification process presents distinctive advantages, as it saves oxygen, requires less organic matter, and requires less time for denitrification compared to conventional nitrogen removal methods. Thus, if the shortcut nitrification–denitrification process could be applied to the CRI system properly, a simpler, more economic, and efficient nitrogen removal method will be obtained. However, as its reaction process shows that the first and the most important step of achieving shortcut nitrification–denitrification is to achieve shortcut nitrification, in this study we explored the feasibility to achieve shortcut nitrification, which produces nitrite as the dominant nitrogen species in effluent, by the addition of potassium chlorate (KClO3 to the influent. In an experimental CRI test system, the effects on nitrogen removal, nitrate inhibition, and nitrite accumulation were studied, and the advantages of achieving a shortcut nitrification–denitrification process were also analysed. The results showed that shortcut nitrification was successfully achieved and maintained in a CRI system by adding 5 mM KClO3 to the influent at a constant pH of 8.4. Under these conditions, the nitrite accumulation percentage was increased, while a lower concentration of 3 mM KClO3 had no obvious effect. The addition of 5mM KClO3 in influent presumably inhibited the activity of ammonia-oxidizing bacteria (AOB and nitrite-oxidizing bacteria (NOB, but inhibition of nitrite-oxidizing bacteria (NOB was so strong that it resulted in a maximum nitrite accumulation percentage of up to over 80%. As a result, nitrite became the dominant nitrogen product in the effluent. Moreover, if the

Effect of Potassium Chlorate on the Treatment of Domestic Sewage by Achieving Shortcut Nitrification in a Constructed Rapid Infiltration System.

Science.gov (United States)

Fang, Qinglin; Xu, Wenlai; Yan, Zhijiao; Qian, Lei

2018-04-04

A constructed rapid infiltration (CRI) system is a new type of sewage biofilm treatment technology, but due to its anaerobic zone it lacks the carbon sources and the conditions for nitrate retention, and its nitrogen removal performance is very poor. However, a shortcut nitrification–denitrification process presents distinctive advantages, as it saves oxygen, requires less organic matter, and requires less time for denitrification compared to conventional nitrogen removal methods. Thus, if the shortcut nitrification–denitrification process could be applied to the CRI system properly, a simpler, more economic, and efficient nitrogen removal method will be obtained. However, as its reaction process shows that the first and the most important step of achieving shortcut nitrification–denitrification is to achieve shortcut nitrification, in this study we explored the feasibility to achieve shortcut nitrification, which produces nitrite as the dominant nitrogen species in effluent, by the addition of potassium chlorate (KClO₃) to the influent. In an experimental CRI test system, the effects on nitrogen removal, nitrate inhibition, and nitrite accumulation were studied, and the advantages of achieving a shortcut nitrification–denitrification process were also analysed. The results showed that shortcut nitrification was successfully achieved and maintained in a CRI system by adding 5 mM KClO₃ to the influent at a constant pH of 8.4. Under these conditions, the nitrite accumulation percentage was increased, while a lower concentration of 3 mM KClO₃ had no obvious effect. The addition of 5mM KClO₃ in influent presumably inhibited the activity of ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB), but inhibition of nitrite-oxidizing bacteria (NOB) was so strong that it resulted in a maximum nitrite accumulation percentage of up to over 80%. As a result, nitrite became the dominant nitrogen product in the effluent. Moreover, if the shortcut

The effect of modifying rooting depths and nitrification inhibitors on nutrient uptake from organic biogas residues in maize

Science.gov (United States)

Dietrich, Charlotte C.; Koller, Robert; Nagel, Kerstin A.; Schickling, Anke; Schrey, Silvia D.; Jablonowski, Nicolai D.

2017-04-01

shallower layers, where their effect on plant growth was temporarily most pronounced. At final harvest (21 DAS) however, effects of nitrification inhibitors on plant height were visible only in deeper layers. Furthermore, the statistically significant interaction between the factors time x layer depths x nitrification inhibitors underlined the dynamic influence of nitrification inhibitors on plant growth over time and across rooting depths. This study offers insights into optimizing nutrient uptake and plant productivity by (re-) using residues from the biogas industry. It is among the first to monitor and try to explain the dynamics of nitrification inhibitors on root system architecture over time. A modified N-fertilization application scheme might also serve as a promising tool in optimizing phytoremediation and phytomining techniques through predictably altering root structure in fertilized layers. References: Nagel, K. A. ; Putz, A. ; Gilmer, F. ; Heinz, K. ; Fischbach, A. ; Pfeifer, J. ; Faget, M. ; Blossfeld, S. ; Ernst, M. ; Dimaki, C. ; Kastenholz, B. ; Kleinert, A.-K. ; Galinski, A. ; Scharr, H. ; Fiorani, F. ; Schurr, U. (2012): GROWSCREEN-Rhizo is a novel phenotyping robot enabling simultaneous measurements of root and shoot growth for plants grown in soil-filled rhizotrons.
Functional plant biology 39(11), 891-904.

Overview of Causes and Control of Nitrification in Chloraminated Drinking Water Distribution Systems

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This chapter provides an integrated overview of nitrification causes and control in chloraminated drinking water distribution systems, leading to an in-depth discussion of nitrification microbiology, monitoring, prevention, response, and engineering improvements in subsequent man...

Assessment of nitrogen and oxygen isotopic fractionation during nitrification and its expression in the marine environment.

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Casciotti, Karen L; Buchwald, Carolyn; Santoro, Alyson E; Frame, Caitlin

2011-01-01

Nitrification is a microbially-catalyzed process whereby ammonia (NH(3)) is oxidized to nitrite (NO(2)(-)) and subsequently to nitrate (NO(3)(-)). It is also responsible for production of nitrous oxide (N(2)O), a climatically important greenhouse gas. Because the microbes responsible for nitrification are primarily autotrophic, nitrification provides a unique link between the carbon and nitrogen cycles. Nitrogen and oxygen stable isotope ratios have provided insights into where nitrification contributes to the availability of NO(2)(-) and NO(3)(-), and where it constitutes a significant source of N(2)O. This chapter describes methods for determining kinetic isotope effects involved with ammonia oxidation and nitrite oxidation, the two independent steps in the nitrification process, and their expression in the marine environment. It also outlines some remaining questions and issues related to isotopic fractionation during nitrification. Copyright © 2011 Elsevier Inc. All rights reserved.

Complete nitrification by a single microorganism

DEFF Research Database (Denmark)

van Kessel, Maartje A. H. J.; Speth, Daan R.; Albertsen, Mads

2015-01-01

Nitrification is a two-step process where ammonia is first oxidized to nitrite by ammonia-oxidizing bacteria and/or archaea, and subsequently to nitrate by nitrite-oxidizing bacteria. Already described by Winogradsky in 18901, this division of labour between the two functional groups is a general...

Importance of copper for nitrification in biological rapid sand filters for drinking water production

DEFF Research Database (Denmark)

Wagner, Florian Benedikt

nitrification during drinking water production provided the motivation to investigate if a lack of copper could be responsible for the problems in nitrifying biofilters. Copper is believed to be an essential cofactor in the enzyme ammonia monooxygenase (AMO), which catalyzes the first essential step...... be supplied in a controlled fashion, and that little maintenance and no chemicals are required. Copper dosing through the novel electrolysis method, as well as through passive dosing from solid copper and active dosing of copper solution, was studied at nine more DWTPs, which all shared a long history...... and chemical speciation modelling were carried out for Nærum DWTP. Results showed that substantial amounts of copper were bound to iron oxide-hydroxides in the filter and that bicarbonate heavily complexed copper in the water phase. Only total copper...

Effects of Applying Lime and CalciumMontmorillonite on Nitrification Dynamics in Acidic Soil

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WANG Mei

2017-01-01

Full Text Available Soil acidification is known as a natural and slow process along with clay mineral weathering. In recent years however, with inten sive soil utilization in agriculture, soil acidification has increased dramatically and nitrification of ammonium nitrogen fertilizer is one of the main contributors to soil acidification. Lime application is the traditional practice to improve acidic soils but it often makes the soil acidic a gain leading to soil compaction in most cases. Montmorillonite is the main clay mineral component of alkaline or neutral soils, more so it is known to undergo further weathering processes during soil acidification. The laboratory-based incubations were used in this study, and nitri fication was measured while kinetic curves were fitted to check the effects of decreasing soil acidity by lime(Ca-OHand montmorillonite (Ca-Mon nitrification of the acidic soil. The results showed that significant nitrification was observed both in Ca-OH and Ca-M treatments, and the nitrification process was fitted in the first-order kinetic model, NNO3=N0+Np(1-exp(-k1t(P-1·d-1was significantly higher than that of Ca-M treatment(2.381 mg·kg-1·d-1. The potential nitrifi cation rate(Vpwere 6.42, 8.58 mg N·kg-1·d-1 at pH 5.7 and 6.2 respectively, and the average nitrification rate(Vaof Ca-OH treatment were 2.71, 3.88 mg N·kg-1·d-1 respectively, which were significantly greater than those of Ca-M treatment(Vp were 3.40, 4.56 mg N·kg-1·d-1 and Va were 2.36, 3.04 mg N·kg-1·d-1 at pH 5.7 and 6.2 respectively. Therefore the net nitrification rate, potential nitrification rate(Vp and average nitrification rate(Vaof Ca-OH treatment were significantly higher than that of Ca-M treatment, suggesting that the possibili ty and degree of soil reacidification by using lime to improve acidic soil is greater than using calcium montmorillonite. This study will provide a new reference for the improvement of acid soils.

Use of 15N in nitrification inhibitor studies with special reference to indigenous materials

International Nuclear Information System (INIS)

Sahrawat, K.L.

1988-01-01

Non-edible oil seed cakes and their constituents have been advantageously used for increasing the efficiency of fertilizer nitrogen (N) for crop production. The beneficial effects of these materials have been attributed to retardation of nitrification, which lessen the loss of N associated with nitrification by leaching and denitrification in situations where these losses are high. However, it is possible that some of the effects of these materials could be due to immobilization-remineralization of N particularly when the carbonaceous materials are added with fertilizers at high rates. A methodology involving the use of 15 N-labelled fertilizers is advanced to sort out whether the beneficial effects of non-edible oil seed cakes and other materials are due to retardation of nitrification and or immobilization-remineralization of fertilizer N. Using the proposed technique it would be possible to make realistic evaluation of the wealth of indigenous products as nitrification inhibitors. Following the proposed approach it would also be possible to widen the scope and depth of research in this area for ultimately better exploitation of indigenous materials as nitrification inhibitors. (author). 18 refs

Use of aliphatic n-alkynes to discriminate soil nitrification activities of ammonia-oxidizing thaumarchaea and bacteria.

Science.gov (United States)

Taylor, Anne E; Vajrala, Neeraja; Giguere, Andrew T; Gitelman, Alix I; Arp, Daniel J; Myrold, David D; Sayavedra-Soto, Luis; Bottomley, Peter J

2013-11-01

Ammonia (NH3)-oxidizing bacteria (AOB) and thaumarchaea (AOA) co-occupy most soils, yet no short-term growth-independent method exists to determine their relative contributions to nitrification in situ. Microbial monooxygenases differ in their vulnerability to inactivation by aliphatic n-alkynes, and we found that NH3 oxidation by the marine thaumarchaeon Nitrosopumilus maritimus was unaffected during a 24-h exposure to ≤ 20 μM concentrations of 1-alkynes C8 and C9. In contrast, NH3 oxidation by two AOB (Nitrosomonas europaea and Nitrosospira multiformis) was quickly and irreversibly inactivated by 1 μM C8 (octyne). Evidence that nitrification carried out by soilborne AOA was also insensitive to octyne was obtained. In incubations (21 or 28 days) of two different whole soils, both acetylene and octyne effectively prevented NH4(+)-stimulated increases in AOB population densities, but octyne did not prevent increases in AOA population densities that were prevented by acetylene. Furthermore, octyne-resistant, NH4(+)-stimulated net nitrification rates of 2 and 7 μg N/g soil/day persisted throughout the incubation of the two soils. Other evidence that octyne-resistant nitrification was due to AOA included (i) a positive correlation of octyne-resistant nitrification in soil slurries of cropped and noncropped soils with allylthiourea-resistant activity (100 μM) and (ii) the finding that the fraction of octyne-resistant nitrification in soil slurries correlated with the fraction of nitrification that recovered from irreversible acetylene inactivation in the presence of bacterial protein synthesis inhibitors and with the octyne-resistant fraction of NH4(+)-saturated net nitrification measured in whole soils. Octyne can be useful in short-term assays to discriminate AOA and AOB contributions to soil nitrification.

Shortcut nitrification-denitrification by means of autochthonous halophilic biomass in an SBR treating fish-canning wastewater.

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Capodici, Marco; Corsino, Santo Fabio; Torregrossa, Michele; Viviani, Gaspare

2018-02-15

Autochthonous halophilic biomass was cultivated in a sequencing batch reactor (SBR) aimed at analyzing the potential use of autochthonous halophilic activated sludge in treating saline industrial wastewater. Despite the high salt concentration (30 g NaCl L -1 ), biological oxygen demand (BOD) and total suspended solids (TSS), removal efficiencies were higher than 90%. More than 95% of the nitrogen was removed via a shortcut nitrification-denitrification process. Both the autotrophic and heterotrophic biomass samples exhibited high biological activity. The use of autochthonous halophilic biomass led to high-quality effluent and helped to manage the issues related to nitrogen removal in saline wastewater treatment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of graphite nanoparticles on nitrification in an activated sludge system.

Science.gov (United States)

Dong, Qian; Liu, Yanchen; Shi, Hanchang; Huang, Xia

2017-09-01

Graphite nanoparticles (GNPs) might result in unexpected effects during their transportation and transformation in wastewater treatment systems, including strong thermo-catalytic and catalytic effects and microbial cytotoxicity. In particular, the effects of GNPs on the nitrification process in activated sludge systems should be addressed. This study aimed to estimate the influence of GNPs on the nitrification process in a short-term nitrification reactor with exposure to different light sources. The results indicated that GNPs could only improve the efficiency of photothermal transformation slightly in the activated sludge system because of its photothermal effects under the standard illuminant (imitating 1 × sun). However, even with better photothermal effects, the nitrification efficiency still decreased significantly with GNP dosing under the standard illuminant, which might result from stronger cytotoxic effects of GNPs on the nitrifying bacteria. The disappearance of extracellular polymeric substances (EPS) around bacterial cells was observed, and the total quantity of viable bacteria decreased significantly after GNP exposuring. Variation in bacterial groups primarily occurred in nitrifying microbial communities, including Nitrosomonas sp., Nitrosospira sp., Comamonas sp. and Bradyrhizobiace sp. Nitrifiers significantly decreased, while the phyla Gammaproteobacteria, Deinocccus, and Bacteroidetes exhibited greater stability during GNP treatment. Copyright © 2017 Elsevier Ltd. All rights reserved.

Rapid Startup and Loading of an Attached Growth, Simultaneous Nitrification/Denitrification Membrane Aerated Bioreactor

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Meyer, Caitlin; Vega, Leticia

2014-01-01

The Membrane Aerated Bioreactor (MABR) is an attached-growth biological system for simultaneous nitrification and denitrification. This design is an innovative approach to common terrestrial wastewater treatments for nitrogen and carbon removal. Implementing a biologically-based water treatment system for long-duration human exploration is an attractive, low energy alternative to physiochemical processes. Two obstacles to implementing such a system are (1) the "start-up" duration from inoculation to steady-state operations and (2) the amount of surface area needed for the biological activity to occur. The Advanced Water Recovery Systems (AWRS) team at JSC explored these two issues through two tests; a rapid inoculation study and a wastewater loading study. Results from these tests demonstrate that the duration from inoculation to steady state can be reduced to two weeks and that the surface area to volume ratio baseline used in the Alternative Water Processor (AWP) test was higher than what was needed to remove the organic carbon and ammonium from the system.

Rapid Start-up and Loading of an Attached Growth, Simultaneous Nitrification/Denitrification Membrane Aerated Bioreactor

Science.gov (United States)

Meyer, Caitlin E.; Pensinger, Stuart; Pickering, Karen D.; Barta, Daniel; Shull, Sarah A.; Vega, Letticia M.; Christenson, Dylan; Jackson, W. Andrew

2015-01-01

Membrane aerated bioreactors (MABR) are attached-growth biological systems used for simultaneous nitrification and denitrification to reclaim water from waste. This design is an innovative approach to common terrestrial wastewater treatments for nitrogen and carbon removal and implementing a biologically-based water treatment system for long-duration human exploration is an attractive, low energy alternative to physiochemical processes. Two obstacles to implementing such a system are (1) the "start-up" duration from inoculation to steady-state operations and (2) the amount of surface area needed for the biological activity to occur. The Advanced Water Recovery Systems (AWRS) team at JSC explored these two issues through two tests; a rapid inoculation study and a wastewater loading study. Results from these tests demonstrate that the duration from inoculation to steady state can be reduced to under two weeks, and that despite low ammonium removal rates, the MABRs are oversized.

Potential Nitrification and Nitrogen Mineral of Soil in Coffee Agroforestry System with Various Shading Trees

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Purwanto .

2007-05-01

Full Text Available The role of shading trees in coffee farms has been well understood to establish suitable condition for the growth of coffee trees, on the other hand their role in nitrogen cycle in coffee farming is not yet well understood. The objectives of this study are to investigate the influence of various legume shading trees on the concentration of soil mineral N (N-NH4 + and N-NO3-, potential nitrification and to study the controlling factors of nitrification under field conditions. This field explorative research was carried out in Sumberjaya, West Lampung. Twelve observation plots covered four land use systems (LUS, i.e. 1 Coffee agroforestry with Gliricidiasepium as shade trees; 2 Coffee agroforestry with Gliricidiaas shade trees and Arachis pintoias cover crops; 3Coffee agroforestry with Paraserianthes falcataria as shade trees; and 4 Mixed/multistrata coffee agroforestry with Gliricidiaand other fruit crops as shade trees. Measurements of soil mineral-N concentration were carried out every three weeks for three months. Results showed that shade tree species in coffee agroforestry significantly affected concentrations of soil NH4 +, NO3- and potential nitrification. Mixed coffee agroforestry had the highest NH4+/N-mineral ratio (7.16% and the lowest potential nitrification (0.13 mg NO2-kg-1 hour -1 compared to other coffee agroforestry systems using single species of leguminous shade trees. Ratio of NH4 + /N-mineral increased 0.8—21% while potential nitrification decreased 55—79% in mixed coffee agroforestry compared to coffee agroforestry with Gliricidia or P. falcatariaas shade trees. Coffee agroforestry with P. falcatariaas shade trees had potential nitrification 53% lower and ratio of NH4 + /N-mineral concentration 20% higher than that with Gliricidia. Coffee agroforestry with P. falcataria as shade trees also had organic C content 17% higher, total N 40% higher, available P 112% higher than that with Gliricidia. The presence of A. pintoiin

Nitrification of industrial and domestic saline wastewaters in moving bed biofilm reactor and sequencing batch reactor

International Nuclear Information System (INIS)

Bassin, Joao P.; Dezotti, Marcia; Sant'Anna, Geraldo L.

2011-01-01

Nitrification of saline wastewaters was investigated in bench-scale moving-bed biofilm reactors (MBBR). Wastewater from a chemical industry and domestic sewage, both treated by the activated sludge process, were fed to moving-bed reactors. The industrial wastewater contained 8000 mg Cl - /L and the salinity of the treated sewage was gradually increased until that level. Residual substances present in the treated industrial wastewater had a strong inhibitory effect on the nitrification process. Assays to determine inhibitory effects were performed with the industrial wastewater, which was submitted to ozonation and carbon adsorption pretreatments. The latter treatment was effective for dissolved organic carbon (DOC) removal and improved nitrification efficiency. Nitrification percentage of the treated domestic sewage was higher than 90% for all tested chloride concentrations up to 8000 mg/L. Results obtained in a sequencing batch reactor (SBR) were consistent with those attained in the MBBR systems, allowing tertiary nitrification and providing adequate conditions for adaptation of nitrifying microorganisms even under stressing and inhibitory conditions.

Spatial patterns of soil nitrification and nitrate export from forested headwaters in the northeastern United States

Science.gov (United States)

Ross, D.S.; Shanley, J.B.; Campbell, J.L.; Lawrence, G.B.; Bailey, S.W.; Likens, G.E.; Wemple, B.C.; Fredriksen, G.; Jamison, A.E.

2012-01-01

Nitrogen export from small forested watersheds is known to be affected by N deposition but with high regional variability. We studied 10 headwater catchments in the northeastern United States across a gradient of N deposition (5.4 - 9.4 kg ha -1 yr -1) to determine if soil nitrification rates could explain differences in stream water NO 3 - export. Average annual export of two years (October 2002 through September 2004) varied from 0.1 kg NO 3 --N ha -1 yr -1 at Cone Pond watershed in New Hampshire to 5.1 kg ha -1 yr -1 at Buck Creek South in the western Adirondack Mountains of New York. Potential net nitrification rates and relative nitrification (fraction of inorganic N as NO 3 -) were measured in Oa or A soil horizons at 21-130 sampling points throughout each watershed. Stream NO 3 - export was positively related to nitrification rates (r 2 = 0.34, p = 0.04) and the relative nitrification (r 2 = 0.37, p = 0.04). These relationships were much improved by restricting consideration to the 6 watersheds with a higher number of rate measurements (59-130) taken in transects parallel to the streams (r 2 of 0.84 and 0.70 for the nitrification rate and relative nitrification, respectively). Potential nitrification rates were also a better predictor of NO 3 - export when data were limited to either the 6 sampling points closest to the watershed outlet (r 2 = 0.75) or sampling points <250 m from the watershed outlet (r 2 = 0.68). The basal area of conifer species at the sampling plots was negatively related to NO 3 - export. These spatial relationships found here suggest a strong influence of near-stream and near-watershed-outlet soils on measured stream NO 3 - export. Copyright 2012 by the American Geophysical Union.

Monitoring the nitrification and identifying the endpoint of ammonium oxidation by using a novel system of titrimetry.

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Zhang, Xin; Zhang, Daijun; Lu, Peili; Bai, Cui; Xiao, Pengying

2011-01-01

Based on the structure of the hybrid respirometer previously developed in our group, a novel implementation for titrimetry was developed, in which two pH electrodes were installed at the inlet and outlet of the measuring cell. The software capable of digital filtering and titration time delay correction was developed in LabVIEW. The hardware and software of the titrimeter and the respirometer were integrated to construct a novel system of respirometry-titrimetry. The system was applied to monitor a batch nitrification process. The obtained profiles of oxygen uptake rate (OUR) and hydrogen ion production rate (HPR) are consistent with each other and agree with the principle of the biological nitrification reaction. According to the OUR and HPR measurements, the oxidized ammonium concentrations were estimated accurately. Furthermore, the endpoint of ammonium oxidation was identified with much higher sensitivity by the HPR measurement. The system could be potentially used for on-line monitoring of biochemical reactions occurring in any kind of bioreactors because its measuring cell is completely independent of the bioreactor.

Nitrogen removal from landfill leachate via ex situ nitrification and sequential in situ denitrification

International Nuclear Information System (INIS)

Zhong Qi; Li Daping; Tao Yong; Wang Xiaomei; He Xiaohong; Zhang Jie; Zhang Jinlian; Guo Weiqiang; Wang Lan

2009-01-01

Ex situ nitrification and sequential in situ denitrification represents a novel approach to nitrogen management at landfills. Simultaneous ammonia and organics removal was achieved in a continuous stirred tank reactor (CSTR). The results showed that the maximum nitrogen loading rate (NLR) and the maximum organic loading rate (OLR) was 0.65 g N l -1 d -1 and 3.84 g COD l -1 d -1 , respectively. The ammonia and chemical oxygen demand (COD) removal was over 99% and 57%, respectively. In the run of the CSTR, free ammonia (FA) inhibition and low dissolved oxygen (DO) were found to be key factors affecting nitrite accumulation. In situ denitrification was studied in a municipal solid waste (MSW) column by recalculating nitrified leachate from CSTR. The decomposition of MSW was accelerated by the recirculation of nitrified leachate. Complete reduction of total oxidized nitrogen (TON) was obtained with maximum TON loading of 28.6 g N t -1 TS d -1 and denitrification was the main reaction responsible. Additionally, methanogenesis inhibition was observed while TON loading was over 11.4 g N t -1 TS d -1 and the inhibition was enhanced with the increase of TON loading

Transcriptional and physiological responses of nitrifying bacteria to heavy metal inhibition

Science.gov (United States)

Heavy metals have been shown to inhibit nitrification, a key process in the removal of nitrogen in wastewater treatment plants. In the present study, the effects of nickel, zinc, lead and cadmium on nitrifying enrichment cultures were studied in batch reactors. The transcriptiona...

Roughness and temperature effects on the filter media of a trickling filter for nitrification.

Science.gov (United States)

Kishimoto, Naoyuki; Ohara, Tetsuya; Hinobayashi, Jouji; Hashimoto, Tsutomu

2014-01-01

The performance of trickling filters using two types of plastic media with the same material, the same shape and different roughness was evaluated during a temperature-decreasing period to understand the roughness and temperature effects on the filter media. Real restaurant wastewater was used for the experiments. The chemical oxygen demand (COD) removal and nitrification performance of plastic media with a rough surface (LT-15) was superior to that with a smooth surface (KT-15). Because the biomass of microorganisms attached on the LT-15 was twice that attached on the KT-15, the larger biomass attached on the LT-15 was thought to be responsible for the higher performance. During the operation, the COD loading and water temperature varied in the range from 0.37 to 1.9 kg m(-3) d(-1) and 17.0--10.0 degrees C, respectively. However, the COD removal performance was not dependent on the COD loading or water temperature. On the contrary, the COD loading and the water temperature influenced the nitrification performance. Although a nitrification efficiency of 100% was recorded at a COD loading of 0.37 kg m(-3) d(-1), it deteriorated to 17-28% at higher COD loading. Moreover, a decline in the water temperature decreased the nitrification performance. The temperature-activity coefficient for nitrification was estimated to be 1.096. Based on this value, it was inferred that the COD loading should be set at less than 0.20 kg m(-3) d(-1) for the complete nitrification of the restaurant wastewater in winter, when the water temperature usually drops to around 10 degrees C.

Influence of soil humus content on the effect of nitrification inhibitors applied with liquid manure and slurry

International Nuclear Information System (INIS)

Peschke, H.

1986-01-01

The effect of the nitrification inhibitors nitrapyrin (NP), 1-carbomoyl-3-(5)-methyl-pyrazole (CMP) and dicyandiamide (DCD) applied with 15 N-labelled liquid manure and slurry was investigated in incubation experiments with ten soils of different humus content, including soils from three selected plots of both the Thyrow soil fertility experiment and the Lauchstaedt static experiment. A significant negative relation was found for liquid manure between the nitrification delay of the three inhibitors in relation to the C/sub t/ content, nitrification capacity, and nitrification turnover of the soil. This relationship was found in the slurry variants only when DCD was applied. (author)

Proposal to support the 4th international conference on nitrification and related processes (ICoN4)

Energy Technology Data Exchange (ETDEWEB)

Klotz, Martin Gunter [Univ. of North Carolina, Charlotte, NC (United States)

2016-11-04

The 4th International Conference on Nitrification and Related Processes (ICoN4) commencing between June 27 and July 1, 2015, at the University of Alberta in Edmonton, Alberta, Canada brings together an international collection of academic, government, and private sector researchers of the global biogeochemical nitrogen cycle to share their scientific discoveries, innovations and pertinent societal impacts. The classical understanding of “nitrification” describes the two-step transformation of ammonium to nitrite and nitrite to nitrate; however, we now know from the analysis genome sequences, the application of ‘omics technologies, microbial ecology, biogeochemistry, and microbial physiology that the transformation of ammonium is not performed by a few particular groups of microorganisms nor is it confined to oxic environments. Past ICoN meetings have explored the interconnections between ammonium- and nitrite-consuming processes in all ecosystems, the emission of greenhouse gases by these processes and their control, and the intersection between intermediates of the nitrification process and other elemental cycles; this has generated tremendous progress in our understanding of the global nitrogen cycle and it has generated excitement in the next generation of N cycle researchers. Nitrification research has a long-standing connection to the Community Science Program of the DOE. Between 1999 and 2001, the JGI generated the first genome sequence of an ammonia-oxidizing bacterium, Nitrosomonas europaea ATCC 19718, and it has subsequently sequenced, or is in the process of sequencing over 50 additional genomes from ammonia-oxidizing bacteria, nitrite-oxidizing bacteria, and ammonia-oxidizing archaea. Autotrophic ammonia- and nitrite-transforming microorganisms play also a critical role in carbon cycling and sequestration in nearly all ecosystems. Not only do they control the concentration and speciation of biologically available N to plants and other

Proposal to support the 4th international conference on nitrification and related processes (ICoN4)

International Nuclear Information System (INIS)

Klotz, Martin Gunter

2016-01-01

The 4th International Conference on Nitrification and Related Processes (ICoN4) commencing between June 27 and July 1, 2015, at the University of Alberta in Edmonton, Alberta, Canada brings together an international collection of academic, government, and private sector researchers of the global biogeochemical nitrogen cycle to share their scientific discoveries, innovations and pertinent societal impacts. The classical understanding of “nitrification” describes the two-step transformation of ammonium to nitrite and nitrite to nitrate; however, we now know from the analysis genome sequences, the application of ‘omics technologies, microbial ecology, biogeochemistry, and microbial physiology that the transformation of ammonium is not performed by a few particular groups of microorganisms nor is it confined to oxic environments. Past ICoN meetings have explored the interconnections between ammonium- and nitrite-consuming processes in all ecosystems, the emission of greenhouse gases by these processes and their control, and the intersection between intermediates of the nitrification process and other elemental cycles; this has generated tremendous progress in our understanding of the global nitrogen cycle and it has generated excitement in the next generation of N cycle researchers. Nitrification research has a long-standing connection to the Community Science Program of the DOE. Between 1999 and 2001, the JGI generated the first genome sequence of an ammonia-oxidizing bacterium, Nitrosomonas europaea ATCC 19718, and it has subsequently sequenced, or is in the process of sequencing over 50 additional genomes from ammonia-oxidizing bacteria, nitrite-oxidizing bacteria, and ammonia-oxidizing archaea. Autotrophic ammonia- and nitrite-transforming microorganisms play also a critical role in carbon cycling and sequestration in nearly all ecosystems. Not only do they control the concentration and speciation of biologically available N to plants and other

Developing a chloramine decay index to understand nitrification: A case study of two chloraminated drinking water distribution systems.

Science.gov (United States)

Moradi, Sina; Liu, Sanly; Chow, Christopher W K; van Leeuwen, John; Cook, David; Drikas, Mary; Amal, Rose

2017-07-01

The management of chloramine decay and the prevention of nitrification are some of the critical issues faced by water utilities that use chloramine as a disinfectant. In this study, potential association between high performance size exclusion chromatography (HPSEC) data obtained with multiple wavelength Ultraviolet (UV) detection from two drinking water distribution systems in Australia and nitrification occurrence was investigated. An increase in the absorbance signal of HPSEC profiles with UV detection at λ=230nm between apparent molecular weights of 200 to 1000Da was observed at sampling sites that experienced rapid chloramine decay and nitrification while its absorbance signal at λ=254nm decreased. A chloramine decay index (C.D.I) defined as the ratio of area beneath the HPSEC spectra at two different wavelengths of 230 and 254nm, was used in assessing chloramine decay occurrences. The C.D.Is of waters at locations that experienced nitrification were consistently higher than locations not experiencing nitrification. A simulated laboratory study showed that the formation of nitrite/nitrate and/or soluble microbial products and/or the release of extracellular polymeric substances (EPS) during nitrification may contribute to the C.D.I. increase. These findings suggest that C.D.I derived from HPSEC with multiple wavelength UV detection could be an informative index to track the occurrence of rapid chloramine decay and nitrification. Copyright © 2016. Published by Elsevier B.V.

Effectiveness of Biology-Based Methods for Inhibiting Orthodontic Tooth Movement. A Systematic Review.

Science.gov (United States)

Cadenas de Llano-Pérula, M; Yañez-Vico, R M; Solano-Reina, E; Palma-Fernandez, J C; Iglesias-Linares, A

Several experimental studies in the literature have tested different biology-based methods for inhibiting or decreasing orthodontic tooth movement (OTM) in humans. This systematic review investigated the effects of these interventions on the rate of tooth movement. Electronic [MedLine; SCOPUS; Cochrane Library; OpenGrey;Web of Science] and manual searches were conducted up to January 26th, 2016 in order to identify publications of clinical trials that compared the decreasing or inhibiting effects of different biology-based methods over OTM in humans. A primary outcome (rate of OTM deceleration/inhibition) and a number of secondary outcomes were examined (clinical applicability, orthodontic force used, possible side effects). Two reviewers selected the studies complying with the eligibility criteria (PICO format) and assessed risk of bias [Cochrane Collaboration's tool]. Data collection and analysis were performed following the Cochrane recommendations. From the initial electronic search, 3726 articles were retrieved and 5 studies were finally included. Two types of biology-based techniques used to reduce the rate of OTM in humans were described: pharmacological and low-level laser therapy. In the first group, human Relaxin was compared to a placebo and administered orally. It was described as having no effect on the inhibition of OTM in humans after 32 days, while the drug tenoxicam, injected locally, inhibited the rate of OTM by up to 10% in humans after 42 days. In the second group, no statistically significant differences were reported, compared to placebo, for the rate of inhibition of OTM in humans after 90 days of observation when a 860 nm continuous wave GaAlA slow-level laser was used. The currently available data do not allow us to draw definitive conclusions about the use of various pharmacological substances and biology-based therapies in humans able to inhibit or decrease the OTM rate. There is an urgent need for more sound well-designed randomized

The role and control of sludge age in biological nutrient removal activated sludge systems.

Science.gov (United States)

Ekama, G A

2010-01-01

The sludge age is the most fundamental and important parameter in the design, operation and control of biological nutrient removal (BNR) activated sludge (AS) systems. Generally, the better the effluent and waste sludge quality required from the system, the longer the sludge age, the larger the biological reactor and the more wastewater characteristics need to be known. Controlling the reactor concentration does not control sludge age, only the mass of sludge in the system. When nitrification is a requirement, sludge age control becomes a requirement and the secondary settling tanks can no longer serve the dual purpose of clarifier and waste activated sludge thickeners. The easiest and most practical way to control sludge age is with hydraulic control by wasting a defined proportion of the reactor volume daily. In AS plants with reactor concentration control, nitrification fails first. With hydraulic control of sludge age, nitrification will not fail, rather the plant fails by shedding solids over the secondary settling tank effluent weirs.

Partial nitrification using aerobic granules in continuous-flow reactor: rapid startup.

Science.gov (United States)

Wan, Chunli; Sun, Supu; Lee, Duu-Jong; Liu, Xiang; Wang, Li; Yang, Xue; Pan, Xiangliang

2013-08-01

This study applied a novel strategy to rapid startup of partial nitrification in continuous-flow reactor using aerobic granules. Mature aerobic granules were first cultivated in a sequencing batch reactor at high chemical oxygen demand in 16 days. The strains including the Pseudoxanthomonas mexicana strain were enriched in cultivated granules to enhance their structural stability. Then the cultivated granules were incubated in a continuous-flow reactor with influent chemical oxygen deamnad being stepped decreased from 1,500 ± 100 (0-19 days) to 750 ± 50 (20-30 days), and then to 350 ± 50 mg l(-1) (31-50 days); while in the final stage 350 mg l(-1) bicarbonate was also supplied. Using this strategy the ammonia-oxidizing bacterium, Nitrosomonas europaea, was enriched in the incubated granules to achieve partial nitrification efficiency of 85-90% since 36 days and onwards. The partial nitrification granules were successfully harvested after 52 days, a period much shorter than those reported in literature. Copyright © 2013 Elsevier Ltd. All rights reserved.

Developing Fluorescence Sensor Systems for Early Detection of Nitrification Events in Chloraminated Drinking Water Distribution Systems

Science.gov (United States)

Detection of nitrification events in chloraminated drinking water distribution systems remains an ongoing challenge for many drinking water utilities, including Dallas Water Utilities (DWU) and the City of Houston (CoH). Each year, these utilities experience nitrification events ...

Fluorescence Sensors for Early Detection of Nitrification in Drinking Water Distribution Systems – Interference Corrections (Poster)

Science.gov (United States)

Nitrification event detection in chloraminated drinking water distribution systems (DWDSs) remains an ongoing challenge for many drinking water utilities, including Dallas Water Utilities (DWU) and the City of Houston (CoH). Each year, these utilities experience nitrification eve...

Fluorescence Sensors for Early Detection of Nitrification in Drinking Water Distribution Systems – Interference Corrections (Abstract)

Science.gov (United States)

Nitrification event detection in chloraminated drinking water distribution systems (DWDSs) remains an ongoing challenge for many drinking water utilities, including Dallas Water Utilities (DWU) and the City of Houston (CoH). Each year, these utilities experience nitrification eve...

Partial Nitrification and Denitrifying Phosphorus Removal in a Pilot-Scale ABR/MBR Combined Process.

Science.gov (United States)

Wu, Peng; Xu, Lezhong; Wang, Jianfang; Huang, Zhenxing; Zhang, Jiachao; Shen, Yaoliang

2015-11-01

A pilot-scale combined process consisting of an anaerobic baffled reactor (ABR) and an aerobic membrane bioreactor (MBR) for the purpose of achieving easy management, low energy demands, and high efficiencies on nutrient removal from municipal wastewater was investigated. The process operated at room temperature with hydraulic retention time (HRT) of 7.5 h, recycle ratio 1 of 200%, recycle ratio 2 of 100%, and dissolved oxygen (DO) of 1 mg/L and achieved good effluent quality with chemical oxygen demand (COD) of 25 mg/L, NH4 (+)-N of 4 mg/L, total nitrogen (TN) of 11 mg/L, and total phosphorus (TP) of 0.7 mg/L. The MBR achieved partial nitrification, and NO2 (-)-N has been accumulated (4 mg/L). Efficient short-cut denitrification was occurred in the ABR with a TN removal efficiency of 51%, while the role of denitrification and phosphorus removal removed partial TN (14%). Furthermore, nitrogen was further removed (11%) by simultaneous nitrification and denitrification in the MBR. In addition, phosphorus accumulating organisms in the MBR sufficiently uptake phosphorus; thus, effluent TP further reduced with a TP removal efficiency of 84%. Analysis of fluorescence in situ hybridization (FISH) showed that ammonia oxidizing bacteria (AOB) and phosphorus accumulating organisms (PAOs) were enriched in the process. In addition, the accumulation of NO2 (-)-N was contributed to the inhibition on the activities of the NOB rather than its elimination.

Is polymeric substrate in influent an indirect impetus for the nitrification process in an activated sludge system?

Science.gov (United States)

Wang, Bin-Bin; Gu, Ya-Wei; Chen, Jian-Meng; Yao, Qian; Li, Hui-Juan; Peng, Dang-Cong; He, Feng

2017-06-01

Different from monomeric substrate, polymeric substrate (PS) needs to undergo slow hydrolysis process before becoming available for consumption by bacteria. Hydrolysis products will be available for the heterotrophs in low concentration, which will reduce competitive advantages of heterotrophs to nitrifiers in mixed culture. Therefore, some links between PS and nitrification process can be expected. In this study, three lab-scale sequencing batch reactors with different PS/total substrate (TS) ratio (0, 0.5 or 1) in influent were performed in parallel to investigate the influence of PS on nitrification process in activated sludge system. The results showed that with the increase of PS/TS ratio, apparent sludge yields decreased, while NO 3 - -N concentration in effluent increased. The change of PS/TS ratio in influent also altered the cycle behaviors of activated sludge. With the increase of PS/TS ratio from 0 to 0.5 and 1, the ammonium and nitrite utilization rate increased ∼2 and 3 times, respectively. The q-PCR results showed that the abundance of nitrifiers in activated sludge for PS/TS ratio of 0.5 and 1 were 0.7-0.8 and 1.4-1.5 orders of magnitude higher than that for PS/TS ratio of 0. However, the abundance of total bacteria decreased about 0.5 orders of magnitude from the former two to the latter. The FISH observation confirmed that the nitrifiers' microcolony became bigger and more robust with the increase of PS/TS ratio. This paper paves a path to understand the role of PS/TS in affecting the nitrification process in biological wastewater treatment systems. Copyright © 2017 Elsevier Ltd. All rights reserved.

Effects of inoculum type and bulk dissolved oxygen concentration on achieving partial nitrification by entrapped-cell-based reactors.

Science.gov (United States)

Rongsayamanont, Chaiwat; Limpiyakorn, Tawan; Khan, Eakalak

2014-07-01

An entrapment of nitrifiers into gel matrix is employed as a tool to fulfill partial nitrification under non-limiting dissolved oxygen (DO) concentrations in bulk solutions. This study aims to clarify which of these two attributes, inoculum type and DO concentration in bulk solutions, is the decisive factor for partial nitrification in an entrapped-cell based system. Four polyvinyl alcohol entrapped inocula were prepared to have different proportions of nitrite-oxidizing bacteria (NOB) and nitrite-oxidizing activity. At a DO concentration of 3 mg l(-1), the number of active NOB cells in an inoculum was the decisive factor for partial nitrification enhancement. However, when the DO concentration was reduced to 2 mg l(-1), all entrapped cell inocula showed similar degrees of partial nitrification. The results suggested that with the lower bulk DO concentration, the preparation of entrapped cell inocula is not useful as the DO level becomes the decisive factor for achieving partial nitrification. Copyright © 2014 Elsevier Ltd. All rights reserved.

Development of a simultaneous partial nitrification and anaerobic ammonia oxidation process in a single reactor.

Science.gov (United States)

Cho, Sunja; Fujii, Naoki; Lee, Taeho; Okabe, Satoshi

2011-01-01

Up-flow oxygen-controlled biofilm reactors equipped with a non-woven fabric support were used as a single reactor system for autotrophic nitrogen removal based on a combined partial nitrification and anaerobic ammonium oxidation (anammox) reaction. The up-flow biofilm reactors were initiated as either a partial nitrifying reactor or an anammox reactor, respectively, and simultaneous partial nitrification and anammox was established by careful control of the aeration rate. The combined partial nitrification and anammox reaction was successfully developed in both biofilm reactors without additional biomass inoculation. The reactor initiated as the anammox reactor gave a slightly higher and more stable mean nitrogen removal rate of 0.35 (±0.19) kg-N m(-3) d(-1) than the reactor initiated as the partial nitrifying reactor (0.23 (±0.16) kg-N m(-3) d(-1)). FISH analysis revealed that the biofilm in the reactor started as the anammox reactor were composed of anammox bacteria located in inner anoxic layers that were surrounded by surface aerobic AOB layers, whereas AOB and anammox bacteria were mixed without a distinguishable niche in the biofilm in the reactor started as the partial nitrifying reactor. However, it was difficult to efficiently maintain the stable partial nitrification owing to inefficient aeration in the reactor, which is a key to development of the combined partial nitrification and anammox reaction in a single biofilm reactor. Copyright © 2010 Elsevier Ltd. All rights reserved.

Biological removal of algae in an integrated pond system

CSIR Research Space (South Africa)

Meiring, PGJ

1995-01-01

Full Text Available A system of oxidation ponds in series with a biological trickling filter is described. It was known that this arrangement was incapable of reducing effectively the levels of algae present in the pond liquid even though nitrification was effected...

Stand-replacing wildfires increase nitrification for decades in southwestern ponderosa pine forests.

Science.gov (United States)

Kurth, Valerie J; Hart, Stephen C; Ross, Christopher S; Kaye, Jason P; Fulé, Peter Z

2014-05-01

Stand-replacing wildfires are a novel disturbance within ponderosa pine (Pinus ponderosa) forests of the southwestern United States, and they can convert forests to grasslands or shrublands for decades. While most research shows that soil inorganic N pools and fluxes return to pre-fire levels within a few years, we wondered if vegetation conversion (ponderosa pine to bunchgrass) following stand-replacing fires might be accompanied by a long-term shift in N cycling processes. Using a 34-year stand-replacing wildfire chronosequence with paired, adjacent unburned patches, we examined the long-term dynamics of net and gross nitrogen (N) transformations. We hypothesized that N availability in burned patches would become more similar to those in unburned patches over time after fire as these areas become re-vegetated. Burned patches had higher net and gross nitrification rates than unburned patches (P < 0.01 for both), and nitrification accounted for a greater proportion of N mineralization in burned patches for both net (P < 0.01) and gross (P < 0.04) N transformation measurements. However, trends with time-after-fire were not observed for any other variables. Our findings contrast with previous work, which suggested that high nitrification rates are a short-term response to disturbance. Furthermore, high nitrification rates at our site were not simply correlated with the presence of herbaceous vegetation. Instead, we suggest that stand-replacing wildfire triggers a shift in N cycling that is maintained for at least three decades by various factors, including a shift from a woody to an herbaceous ecosystem and the presence of fire-deposited charcoal.

Combining multiple isotopes and metagenomic to delineate the role of tree canopy nitrification in European forests along nitrogen deposition and climate gradients

Science.gov (United States)

Guerrieri, R.; Avila, A.; Barceló, A.; Elustondo, D.; Hellstein, S.; Magnani, F.; Mattana, S.; Matteucci, G.; Merilä, P.; Michalski, G. M.; Nicolas, M.; Vanguelova, E.; Verstraeten, A.; Waldner, P.; Watanabe, M.; Penuelas, J.; Mencuccini, M.

2017-12-01

Forest canopies influence our climate through carbon, water and energy exchanges with the atmosphere. However, less investigated is whether and how tree canopies change the chemical composition of precipitation, with important implications on forest nutrient cycling. Recently, we provided for the first time isotopic evidence that biological nitrification in tree canopies was responsible for significant changes in the amount of nitrate from rainfall to throughfall across two UK forests at high nitrogen (N) deposition [1]. This finding strongly suggested that bacteria and/or Archaea species of the phyllosphere are responsible for transforming atmospheric N before it reaches the soil. Despite microbial epiphytes representing an important component of tree canopies, attention has been mostly directed to their role as pathogens, while we still do not know whether and how they affect nutrient cycling. Our study aims to 1) characterize microbial communities harboured in tree canopies for two of the most dominant species in Europe (Fagus sylvatica L. and Pinus sylvestris L.) using metagenomic techniques, 2) quantify the functional genes related to nitrification but also to denitrification and N fixation, and 3) estimate the contribution of NO3 derived from biological canopy nitrification vs. atmospheric NO3 input by using δ15N, δ18O and δ17O of NO3in forest water. We considered i) twelve sites included in the EU ICP long term intensive forest monitoring network, chosen along a climate and nitrogen deposition gradient, spanning from Fennoscandia to the Mediterranean and ii) a manipulation experiment where N mist treatments were carried out either to the soil or over tree canopies. We will present preliminary results regarding microbial diversity in the phyllosphere, water (rainfall and throughfall) and soil samples over the gradient. Furthermore, we will report differences between the two investigated tree species for the phyllosphere core microbiome in terms of relative

Nitrogen removal from sludge digester liquids by nitrification/denitrification or partial nitritation/anammox: environmental and economical considerations.

Science.gov (United States)

Fux, C; Siegrist, H

2004-01-01

In wastewater treatment plants with anaerobic sludge digestion, 15-20% of the nitrogen load is recirculated to the main stream with the return liquors from dewatering. Separate treatment of this ammonium-rich digester supernatant significantly reduces the nitrogen load of the activated sludge system. Two biological applications are considered for nitrogen elimination: (i) classical autotrophic nitrification/heterotrophic denitrification and (ii) partial nitritation/autotrophic anaerobic ammonium oxidation (anammox). With both applications 85-90% nitrogen removal can be achieved, but there are considerable differences in terms of sustainability and costs. The final gaseous products for heterotrophic denitrification are generally not measured and are assumed to be nitrogen gas (N2). However, significant nitrous oxide (N2O) production can occur at elevated nitrite concentrations in the reactor. Denitrification via nitrite instead of nitrate has been promoted in recent years in order to reduce the oxygen and the organic carbon requirements. Obviously this "achievement" turns out to be rather disadvantageous from an overall environmental point of view. On the other hand no unfavorable intermediates are emitted during anaerobic ammonium oxidation. A cost estimate for both applications demonstrates that partial nitritation/anammox is also more economical than classical nitrification/denitrification. Therefore autotrophic nitrogen elimination should be used in future to treat ammonium-rich sludge liquors.

Characteristics of N2O production and hydroxylamine variation in short-cut nitrification SBR process.

Science.gov (United States)

Hu, Bo; Ye, Junhong; Zhao, Jianqiang; Ding, Xiaoqian; Yang, Liwei; Tian, Xiaolei

2018-01-01

In order to study the characteristics of nitrous oxide (N 2 O) production and hydroxylamine (NH 2 OH) variation under oxic conditions, concentrations of NH 2 OH and N 2 O were simultaneously monitored in a short-cut nitrification sequencing batch reactor (SBR) operated with different influent ammonia concentrations. In the short-cut nitrification process, N 2 O production was increased with the increasing of ammonia concentration in influent. The maximum concentrations of dissolved N 2 O-N in the reactor were 0.11 mg/L and 0.52 mg/L when ammonia concentrations in the influent were 50 mg/L and 70 mg/L respectively. Under the low and medium ammonia load phases, the concentrations of NH 2 OH-N in the reactor were remained at a low level which fluctuated around 0.06 mg/L in a small range, and did not change with the variation of influent NH 4 + -N concentration. Based on the determination results, the half-saturation of NH 2 OH in the biochemical conversion process of NH 2 OH to NO 2 - -N was very small, and the value of 0.05 mg NH 2 OH-N/L proposed in the published literature was accurate. NH 2 OH is an important intermediate in the nitrification process, and the direct determination of NH 2 OH in the nitrification process was beneficial for revealing the kinetic process of NH 2 OH production and consumption as well as the effects of NH 2 OH on N 2 O production in the nitrification process.

Impact of water boundary layer diffusion on the nitrification rate of submerged biofilter elements from a recirculating aquaculture system

DEFF Research Database (Denmark)

Prehn, Jonas; Waul, Christopher Kevin; Pedersen, Lars-Flemming

2012-01-01

Total ammonia nitrogen (TAN) removal by microbial nitrification is an essential process in recirculating aquaculture systems (RAS). In order to protect the aquatic environment and fish health, it is important to be able to predict the nitrification rates in RAS’s. The aim of this study was to det...... biofilters. The results may thus have practical implications in relation to the design, operational strategy of RAS biofilters and how to optimize TAN removal in fixed film biofilter systems......Total ammonia nitrogen (TAN) removal by microbial nitrification is an essential process in recirculating aquaculture systems (RAS). In order to protect the aquatic environment and fish health, it is important to be able to predict the nitrification rates in RAS’s. The aim of this study...

Nitrification and nitrogen mineralization in agricultural soils contaminated by copper mining activities in Central Chile

OpenAIRE

Moya, Héctor; Verdejo, José; Yáñez, Carolina; Álvaro, Juan E.; Sauvé, Sébastien; Neaman, Alexander

2017-01-01

Microbiological bioassays of nitrification and nitrogen mineralization have been used for evaluation of soil quality on metal-contaminated soils. We evaluated the effectiveness of nitrification and nitrogen mineralization bioassays as quality indicators of soil degradation caused by metal contamination. We performed standard tests based on protocols of ISO 14238 (2012) and ISO 15685 (2012) on 90 soil samples collected from agricultural areas in central Chile that were historically contaminate...

The Biological Behaviors of Rat Dermal Fibroblasts Can Be Inhibited by High Levels of MMP9

Directory of Open Access Journals (Sweden)

Sheng-Neng Xue

2012-01-01

Full Text Available Aims. To explore the effects of the high expression of MMP9 on biological behaviors of fibroblasts. Methods. High glucose and hyperhomocysteine were used to induce MMP9 expression in skin fibroblasts. Cell proliferation was detected by flow cytometry and cell viability by CCK-8. ELISA assay was used to detect collagen (hydroxyproline secretion. Scratch test was employed to evaluate horizontal migration of cells and transwell method to evaluate vertical migration of cells. Results. The mRNA and protein expressions of MMP9 and its protease activity were significantly higher in cells treated with high glucose and hyperhomocysteine than those in control group. At the same time, the S-phase cell ratio, proliferation index, cell viability, collagen (hydroxyproline secretion, horizontal migration rate, and the number of vertical migration cells decreased in high-glucose and hyperhomocysteine-treated group. Tissue inhibitor of metalloproteinase 1 (TIMP1, which inhibits the activity of MMP9, recovered the above biological behaviors. Conclusions. High expression of MMP9 in skin fibroblasts could be induced by cultureing in high glucose and hyperhomocysteine medium, which inhibited cell biological behaviors. Inhibitions could be reversed by TIMP1. The findings suggested that MMP9 deters the healing of diabetic foot ulcers by inhibiting the biological behaviors of fibroblasts.

Influence of rice straw amendment on mercury methylation and nitrification in paddy soils

International Nuclear Information System (INIS)

Liu, Yu-Rong; Dong, Ji-Xin; Han, Li-Li; Zheng, Yuan-Ming; He, Ji-Zheng

2016-01-01

Currently, rice straw return in place of burning is becoming more intensive in China than observed previously. However, little is known on the effect of returned rice straw on mercury (Hg) methylation and microbial activity in contaminated paddy fields. Here, we conduct a microcosm experiment to evaluate the effect of rice straw amendment on the Hg methylation and potential nitrification in two paddy soils with distinct Hg levels. Our results show that amended rice straw enhanced Hg methylation for relatively high Hg content soil, but not for low Hg soil, spiking the same additional fresh Hg. methylmercury (MeHg) concentration was significantly correlated to the dissolved organic carbon (DOC) content and relative abundance of dominant microbes associated with Hg methylation. Similarly, amended rice straw was found to only enhance the potential nitrification rate in soil with relatively high Hg content. These findings provide evidence that amended rice straw differentially modulates Hg methylation and nitrification in Hg contaminated soils possibly resulting from different characteristics in the soil microbial community. This highlights that caution should be taken when returning rice straw to contaminated paddy fields, as this practice may increase the risk of more MeHg production. Main finding: Rice straw amendment enhanced both Hg methylation and nitrification potential in the relatively high, but not low, Hg soil. - Highlights: • Rice straw enhanced Hg methylation in relatively high Hg content paddy soils. • Microbial community directly correlated to the Hg methylation. • Mercury methylation in soils depend on Hg bioavailability and microbial activities. • Hg input affects microbial community associated with decomposition of rice straw.

Nitrification at different salinities: Biofilm community composition and physiological plasticity.

Science.gov (United States)

Gonzalez-Silva, Blanca M; Jonassen, Kjell Rune; Bakke, Ingrid; Østgaard, Kjetill; Vadstein, Olav

2016-05-15

This paper describes an experimental study of microbial communities of three moving bed biofilm reactors (MBBR) inoculated with nitrifying cultures originated from environments with different salinity; freshwater, brackish (20‰) and seawater. All reactors were run until they operated at a conversion efficiency of >96%. The microbial communities were profiled using 454-pyrosequencing of 16S rRNA gene amplicons. Statistical analysis was used to investigate the differences in microbial community structure and distribution of the nitrifying populations with different salinity environments. Nonmetric multidimensional scaling analysis (NMDS) and the PERMANOVA test based on Bray-Curtis similarities revealed significantly different community structure in the three reactors. The brackish reactor showed lower diversity index than fresh and seawater reactors. Venn diagram showed that 60 and 78% of the total operational taxonomic units (OTUs) in the ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB) guild, respectively, were unique OTUs for a given reactor. Similarity Percentages (SIMPER) analysis showed that two-thirds of the total difference in community structure between the reactors was explained by 10 OTUs, indicating that only a small number of OTUs play a numerically dominant role in the nitrification process. Acute toxicity of salt stress on ammonium and nitrite oxidizing activities showed distinctly different patterns, reaching 97% inhibition of the freshwater reactor for ammonium oxidation rate. In the brackish culture, inhibition was only observed at maximal level of salinity, 32‰. In the fully adapted seawater culture, higher activities were observed at 32‰ than at any of the lower salinities. Copyright © 2016 Elsevier Ltd. All rights reserved.

Biotransformation of pharmaceuticals under nitrification, nitratation and heterotrophic conditions

International Nuclear Information System (INIS)

Fernandez-Fontaina, E.; Gomes, I.B.; Aga, D.S.; Omil, F.; Lema, J.M.; Carballa, M.

2016-01-01

The effect of nitrification, nitratation and heterotrophic conditions on the biotransformation of several pharmaceuticals in a highly enriched nitrifying activated sludge was evaluated in this study by selective activation of ammonia oxidizing bacteria (AOB), nitrite oxidizing bacteria (NOB) and heterotrophic bacteria. Nitrifiers displayed a noticeable capacity to process ibuprofen due to hydroxylation by ammonia monooxygenase (AMO) to produce 2-hydroxy-ibuprofen. Naproxen was also biotransformed under nitrifying conditions. On the other hand, heterotrophic bacteria present in the nitrifying activated sludge (NAS) biotransformed sulfamethoxazole. In contrast, both nitrifying and heterotrophic activities were ineffective against diclofenac, diazepam, carbamazepine and trimethoprim. Similar biotransformation rates of erythromycin, roxithromycin and fluoxetine were observed under all conditions tested. Overall, results from this study give more evidence on the role of the different microbial communities present in activated sludge reactors on the biological removal of pharmaceuticals. - Highlights: • The removal of pharmaceuticals in nitrifying activated sludge (NAS) was studied. • Nitrifying activity increases biotransformation rate of ibuprofen and naproxen. • Hydroxylation of ibuprofen by ammonia monooxygenase of ammonia oxidizing bacteria • Heterotrophic activity enhances biotransformation of sulfamethoxazole in NAS. • Recalcitrance of trimethoprim, diclofenac, carbamazepine and diazepam in NAS

Biotransformation of pharmaceuticals under nitrification, nitratation and heterotrophic conditions

Energy Technology Data Exchange (ETDEWEB)

Fernandez-Fontaina, E., E-mail: eduardo.fernandez.fontaina@usc.es [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain); Gomes, I.B. [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain); Aga, D.S. [Department of Chemistry, University at Buffalo, The State University of New York, Buffalo, NY 14260 (United States); Omil, F.; Lema, J.M.; Carballa, M. [Department of Chemical Engineering, Institute of Technology, University of Santiago de Compostela, 15782 Santiago de Compostela (Spain)

2016-01-15

The effect of nitrification, nitratation and heterotrophic conditions on the biotransformation of several pharmaceuticals in a highly enriched nitrifying activated sludge was evaluated in this study by selective activation of ammonia oxidizing bacteria (AOB), nitrite oxidizing bacteria (NOB) and heterotrophic bacteria. Nitrifiers displayed a noticeable capacity to process ibuprofen due to hydroxylation by ammonia monooxygenase (AMO) to produce 2-hydroxy-ibuprofen. Naproxen was also biotransformed under nitrifying conditions. On the other hand, heterotrophic bacteria present in the nitrifying activated sludge (NAS) biotransformed sulfamethoxazole. In contrast, both nitrifying and heterotrophic activities were ineffective against diclofenac, diazepam, carbamazepine and trimethoprim. Similar biotransformation rates of erythromycin, roxithromycin and fluoxetine were observed under all conditions tested. Overall, results from this study give more evidence on the role of the different microbial communities present in activated sludge reactors on the biological removal of pharmaceuticals. - Highlights: • The removal of pharmaceuticals in nitrifying activated sludge (NAS) was studied. • Nitrifying activity increases biotransformation rate of ibuprofen and naproxen. • Hydroxylation of ibuprofen by ammonia monooxygenase of ammonia oxidizing bacteria • Heterotrophic activity enhances biotransformation of sulfamethoxazole in NAS. • Recalcitrance of trimethoprim, diclofenac, carbamazepine and diazepam in NAS.

How partial nitrification could improve reclaimed wastewater transport in long pipes.

Science.gov (United States)

Delgado, S; Alvarez, M; Rodríguez-Gómez, L E; Elmaleh, S; Aguiar, E

2001-01-01

Reclaimed wastewater transport is studied in a concrete-lined cast iron pipe, where a nitrification-denitrification process occurs. The pipe is part of the Reuse System of Reclaimed Wastewater of South Tenerife (Spain), 0.6 m in diameter and 61 km long. In order to improve wastewater quality, at 10 km from the inlet there is injection of fresh water saturated in dissolved oxygen (DO), after which a fast nitrification process usually appears (less than two hours of space time). The amount of oxidized nitrogen compounds produced varies between 0.8 and 4.4 mg/l NOx(-)-N. When DO has disappeared, a denitrification process begins. The removal of nitrite is complete at the end of the pipe, whereas the nitrate does not disappear completely, leaving a concentration of about 0.4-0.5 mg/l. For a COD/NOx(-)-N ratio higher than 5, a first order nitrification rate in NOx(-)-N has resulted, with the constant k20 = 0.079 h-1, for a NOx(-)-N concentration range of 0.8-4.4 mg/l. Finally the following temperature dependency for the first order denitrification rate constant has been found: k = k20 x 1 x 15T-20. Although nitrogen could be used as nutrient in the agricultural reuse, its removal from reclaimed wastewater could be useful in order to diminish the chlorine needs for reclaimed wastewater disinfection.

Revisiting nitrification in the Eastern Tropical South Pacific: A focus on controls

Science.gov (United States)

Peng, Xuefeng; Fuchsman, Clara A.; Jayakumar, Amal; Warner, Mark J.; Devol, Allan H.; Ward, Bess B.

2016-03-01

Nitrification, the oxidation of ammonium (NH4+) to nitrite (NO2-) and to nitrate (NO3-), is a component of the nitrogen (N) cycle internal to the fixed N pool. In oxygen minimum zones (OMZs), which are hotspots for oceanic fixed N loss, nitrification plays a key role because it directly supplies substrates for denitrification and anaerobic ammonia oxidation (anammox), and may compete for substrates with these same processes. However, the control of oxygen and substrate concentrations on nitrification are not well understood. We performed onboard incubations with 15N-labeled substrates to measure rates of NH4+ and NO2- oxidation in the eastern tropical South Pacific (ETSP). The spatial and depth distributions of NH4+ and NO2- oxidation rates were primarily controlled by NH4+ and NO2- availability, oxygen concentration, and light. In the euphotic zone, nitrification was partially photoinhibited. In the anoxic layer, NH4+ oxidation was negligible or below detection, but high rates of NO2- oxidation were observed. NH4+ oxidation displayed extremely high affinity for both NH4+ and oxygen. The positive linear correlations between NH4+ oxidation rates and in situ NH4+ concentrations and ammonia monooxygenase subunit A (amoA) gene abundances in the upper oxycline indicate that the natural assemblage of ammonia oxidizers responds to in situNH4+ concentrations or supply by adjusting their population size, which determines the NH4+ oxidation potential. The depth distribution of archaeal and bacterial amoA gene abundances and N2O concentration, along with independently reported simultaneous direct N2O production rate measurements, suggests that AOA were predominantly responsible for NH4+ oxidation, which was a major source of N2O production at oxygen concentrations > 5 µM.

Effect of iron ions and electric field on nitrification process in the periodic reversal bio-electrocoagulation system.

Science.gov (United States)

Qian, Guangsheng; Hu, Xiaomin; Li, Liang; Ye, Linlin; Lv, Weijian

2017-11-01

This study explored the nitrification mechanism of a periodic reversal bio-electrocoagulation system with Fe-C electrodes. The ammonia nitrogen removal was compared in four identical cylindrical sequencing bath reactors. Two of them were reactors with Fe-C electrodes (S1) and C-C electrodes (S2), respectively. The other two were a reactor with iron ions (S3) and a traditional SBR (S4), respectively. The results demonstrated that the effect on enhancing nitrification in S1 was the best among all four SBRs, followed by S3, S2 and S4. Iron ions increased the biomass, and electric field improved the proton transfer and enzyme activity. The dominant bacterial genera in the four SBRs were Hyphomicrobium, Thauera, Nitrobacter, Nitrosomonas, Paracoccus and Hydrogenophaga. The iron ions may increase the levels of Nitrosomonas and Nitrobacter, both of which were the main microbes of the nitrification process. This study provided a significant and meaningful understanding of nitrification in a bio-electrocoagulation system. Copyright © 2017 Elsevier Ltd. All rights reserved.

[Effects of biochar and nitrification inhibitor incorporation on global warming potential of a vegetable field in Nanjing, China].

Science.gov (United States)

Li, Bo; Li, Qiao-Ling; Fan, Chang-Hua; Sun, Li-Ying; Xiong, Zheng-Qin

2014-09-01

The influences of biochar and nitrification inhibitor incorporation on global warming potential (GWP) of a vegetable field were studied using the static chamber and gas chromatography method. Compared with the treatments without biochar addition, the annual GWP of N2O and CH4 and vegetable yield were increased by 8.7%-12.4% and 16.1%-52.5%, respectively, whereas the greenhouse gas intensity (GHGI) were decreased by 5.4%-28.7% following biochar amendment. Nitrification inhibitor significantly reduced the N2O emission while had little influence on CH4 emission, decreased GWP by 17.5%-20.6%, increased vegetable yield by 21.2%-40.1%, and decreased the GHGI significantly. The combined application of biochar and nitrification inhibitor significantly increased both vegetable yield and GWP, but to a greater extent for vegetable yield. Therefore, nitrification inhibitor incorporation could be served as an appropriate practice for increasing vegetable yield and mitigating GHG emissions in vegetable field.

Nitrification is a primary driver of nitrous oxide production in laboratory microcosms from different land-use soils

Directory of Open Access Journals (Sweden)

Rui Liu

2016-09-01

Full Text Available Most studies on soil N2O emissions have focused either on the quantifying of agricultural N2O fluxes or on the effect of environmental factors on N2O emissions. However very limited information is available on how land-use will affect N2O production, and nitrifiers involved in N2O emissions in agricultural soil ecosystems. Therefore, this study aimed at evaluating the relative importance of nitrification and denitrification to N2O emissions from different land-use soils and identifying the potential underlying microbial mechanisms. A 15N-tracing experiment was conducted under controlled laboratory conditions on four agricultural soils collected from different land-use. We measured N2O fluxes, nitrate (NO3− and ammonium (NH4+ concentration and15N2O, 15NO3− and 15NH4+ enrichment during the incubation. Quantitative PCR was used to quantify ammonia-oxidizing archaea (AOA and ammonia-oxidizing bacteria (AOB. Our results showed that nitrification was the main contributor to N2O production in soils from sugarcane, dairy pasture and cereal cropping systems, while denitrification played a major role in N2O production in the vegetable soil under the experimental conditions. Nitrification contributed to 96.7% of the N2O emissions in sugarcane soil followed by 71.3% in the cereal cropping soil and 70.9% in the dairy pasture soil, while only around 20.0% of N2O was produced from nitrification in vegetable soil. The proportion of nitrified nitrogen as N2O (PN2O value varied across different soils, with the highest PN2O value (0.26‰ found in the cereal cropping soil, which was around 10 times higher than that in other three systems. AOA were the abundant ammonia oxidizers, and were significantly correlated to N2O emitted from nitrification in the sugarcane soil, while AOB were significantly correlated with N2O emitted from nitrification in the cereal cropping soil. Our findings suggested that soil type and land-use might have strongly affected the

Nitrification Is a Primary Driver of Nitrous Oxide Production in Laboratory Microcosms from Different Land-Use Soils.

Science.gov (United States)

Liu, Rui; Hu, Hangwei; Suter, Helen; Hayden, Helen L; He, Jizheng; Mele, Pauline; Chen, Deli

2016-01-01

Most studies on soil N2O emissions have focused either on the quantifying of agricultural N2O fluxes or on the effect of environmental factors on N2O emissions. However, very limited information is available on how land-use will affect N2O production, and nitrifiers involved in N2O emissions in agricultural soil ecosystems. Therefore, this study aimed at evaluating the relative importance of nitrification and denitrification to N2O emissions from different land-use soils and identifying the potential underlying microbial mechanisms. A (15)N-tracing experiment was conducted under controlled laboratory conditions on four agricultural soils collected from different land-use. We measured N2O fluxes, nitrate ([Formula: see text]), and ammonium ([Formula: see text]) concentration and (15)N2O, (15)[Formula: see text], and (15)[Formula: see text] enrichment during the incubation. Quantitative PCR was used to quantify ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB). Our results showed that nitrification was the main contributor to N2O production in soils from sugarcane, dairy pasture and cereal cropping systems, while denitrification played a major role in N2O production in the vegetable soil under the experimental conditions. Nitrification contributed to 96.7% of the N2O emissions in sugarcane soil followed by 71.3% in the cereal cropping soil and 70.9% in the dairy pasture soil, while only around 20.0% of N2O was produced from nitrification in vegetable soil. The proportion of nitrified nitrogen as N2O (PN2O-value) varied across different soils, with the highest PN2O-value (0.26‰) found in the cereal cropping soil, which was around 10 times higher than that in other three systems. AOA were the abundant ammonia oxidizers, and were significantly correlated to N2O emitted from nitrification in the sugarcane soil, while AOB were significantly correlated with N2O emitted from nitrification in the cereal cropping soil. Our findings suggested that soil

Remediation of incomplete nitrification and capacity increase of biofilters at different drinking water treatment plants through copper dosing.

Science.gov (United States)

Wagner, Florian B; Nielsen, Peter Borch; Boe-Hansen, Rasmus; Albrechtsen, Hans-Jørgen

2018-04-01

Drinking water treatment plants based on groundwater may suffer from incomplete ammonium removal, which deteriorates drinking water quality and constrains water utilities in the operation of their plants. Ammonium is normally removed through nitrification in biological granular media filters, and recent studies have demonstrated that dosing of copper can stimulate the removal of ammonium. Here, we investigated if copper dosing could generically improve ammonium removal of biofilters, at treatment plants with different characteristics. Copper was dosed at ≤1.5 μg Cu/L to biofilters at 10 groundwater treatment plants, all of which had displayed several years of incomplete nitrification. Plants exceeded the Danish national water quality standard of 0.05 mg NH 4 + /L by a factor of 2-12. Within only 2-3 weeks of dosing, ammonium removal rates increased significantly (up to 150%). Nitrification was fully established, with ammonium effluent concentrations of plants, regardless of the differences in raw water chemistry, ammonium loading rates, filter design and operation, or treatment plant configuration. However, for filters without primary filtration, it took longer time to reach complete ammonium removal than for filters receiving prefiltered water, likely due to sorption of copper to iron oxides, at plants without prefiltration. With complete ammonium removal, we subjected two plants to short-term loading rate upshifts, to examine the filters' ability to cope with loading rate variations. After 2 months of dosing and an average loading rate of 1.0 g NH 4 + -N/m 3 filter material/h, the loading rate was upshifted by 50%. Yet, a filter managed to completely remove all the influent ammonium, showing that with copper dosing the filter had extra capacity to remove ammonium even beyond its normal loading rates. Depth sampling revealed that the ammonium removal rate of the filter's upper 10 cm increased more than 7-fold from 0.67 to 4.90 g NH 4 + -N/m 3 /h, and

Acceleration of aged-landfill stabilization by combining partial nitrification and leachate recirculation: A field-scale study

Energy Technology Data Exchange (ETDEWEB)

Chung, Jinwook [R& D Center, Samsung Engineering Co., Ltd., 415-10 Woncheon-dong, Youngtong-gu, Suwon, Gyeonggi-do 443-823 (Korea, Republic of); Kim, Seungjin; Baek, Seungcheon [Department of Civil and Environmental Engineering, Hanyang University, Sa 3-dong, Sangnok-gu, Ansan, Gyeonggi-do 426-791 (Korea, Republic of); Lee, Nam-Hoon [Department of Environmental & Energy Engineering, Anyang University, 22 Samdeok-ro, 37 Beon-gil, Manan-gu, Anyang, Gyeonggi-do 430-714 (Korea, Republic of); Park, Seongjun; Lee, Junghun; Lee, Heechang [Department of Civil and Environmental Engineering, Hanyang University, Sa 3-dong, Sangnok-gu, Ansan, Gyeonggi-do 426-791 (Korea, Republic of); Bae, Wookeun, E-mail: wkbae@hanyang.ac.kr [Department of Civil and Environmental Engineering, Hanyang University, Sa 3-dong, Sangnok-gu, Ansan, Gyeonggi-do 426-791 (Korea, Republic of)

2015-03-21

Highlights: • To solve the drawbacks (NH{sub 4}{sup +} accumulation) of leachate recirculation, ex-situ SBR was applied. • Produced NO{sub 2}{sup −} was recirculated and denitrified to N{sub 2} in landfill with insufficient carbon source. • Despite the inhibition of methanogenesis by DO and nitrate, CH{sub 4} fraction eventually increased. - Abstract: Leachate recirculation for rapid landfill stabilization can result in the accumulation of high-strength ammonium. An on-site sequencing batch reactor (SBR) was therefore, applied to oxidize the ammonium to nitrite, which was then recirculated to the landfill for denitrification to nitrogen gas. At relatively higher ammonium levels, nitrite accumulated well in the SBR; the nitrite was denitrified stably in the landfill, despite an insufficient biodegradable carbon source in the leachate. As the leachate was recirculated, the methane and carbon dioxide contents produced from the landfill fluctuated, implying that the organic acids and hydrogen produced in the acid production phase acted as the carbon source for denitrification in the landfill. Leachate recirculation combined with ex-situ partial nitrification of the leachate may enhance the biodegradation process by: (a) removing the nitrogen that is contained with the leachate, and (b) accelerating landfill stabilization, because the biodegradation efficiency of landfill waste is increased by supplying sufficient moisture and its byproducts are used as the carbon source for denitrification. In addition, partial nitrification using an SBR has advantages for complete denitrification in the landfill, since the available carbon source is in short supply in aged landfills.

Effects of cyanobacterial-driven pH increases on sediment nutrient fluxes and coupled nitrification-denitrification in a shallow fresh water estuary

Directory of Open Access Journals (Sweden)

Y. Gao

2012-07-01

Full Text Available Summer cyanobacterial blooms caused an elevation in pH (9 to ~10.5 that lasted for weeks in the shallow and tidal-fresh region of the Sassafras River, a tributary of Chesapeake Bay (USA. Elevated pH promoted desorption of sedimentary inorganic phosphorus and facilitated conversion of ammonium (NH₄⁺ to ammonia (NH₃. In this study, we investigated pH effects on exchangeable NH₄⁺ desorption, pore water diffusion and the flux rates of NH₄⁺, soluble reactive phosphorus (SRP and nitrate (NO₃⁻, nitrification, denitrification, and oxygen consumption. Elevated pH enhanced desorption of exchangeable NH₄⁺ through NH₃ formation from both pore water and adsorbed NH₄⁺ pools. Progressive penetration of high pH from the overlying water into sediment promoted the mobility of SRP and the release of total ammonium (NH₄⁺ and NH₃ into the pore water. At elevated pH levels, high sediment-water effluxes of SRP and total ammonium were associated with reduction of nitrification, denitrification and oxygen consumption rates. Alkaline pH and the toxicity of NH₃ may inhibit nitrification in the thin aerobic zone, simultaneously constraining coupled nitrification–denitrification with limited NO₃⁻ supply and high pH penetration into the anaerobic zone. Geochemical feedbacks to pH elevation, such as enhancement of dissolved nutrient effluxes and reduction in N₂ loss via denitrification, may enhance the persistence of cyanobacterial blooms in shallow water ecosystems.

Empowering a mesophilic inoculum for thermophilic nitrification: Growth mode and temperature pattern as critical proliferation factors for archaeal ammonia oxidizers.

Science.gov (United States)

Courtens, Emilie N P; Vandekerckhove, Tom; Prat, Delphine; Vilchez-Vargas, Ramiro; Vital, Marius; Pieper, Dietmar H; Meerbergen, Ken; Lievens, Bart; Boon, Nico; Vlaeminck, Siegfried E

2016-04-01

Cost-efficient biological treatment of warm nitrogenous wastewaters requires the development of thermophilic nitrogen removal processes. Only one thermophilic nitrifying bioreactor was described so far, achieving 200 mg N L(-1) d(-1) after more than 300 days of enrichment from compost samples. From the practical point of view in which existing plants would be upgraded, however, a more time-efficient development strategy based on mesophilic nitrifying sludge is preferred. This study evaluated the adaptive capacities of mesophilic nitrifying sludge for two linear temperature increase patterns (non-oscillating vs. oscillating), two different slopes (0.25 vs. 0.08 °C d(-1)) and two different reactor types (floc vs. biofilm growth). The oscillating temperature pattern (0.25 °C d(-1)) and the moving bed biofilm reactor (0.08 °C d(-1)) could not reach nitrification at temperatures higher than 46 °C. However, nitrification rates up to 800 mg N L(-1) d(-1) and 150 mg N g(-1) volatile suspended solids d(-1) were achieved at a temperature as high as 49 °C by imposing the slowest linear temperature increase to floccular sludge. Microbial community analysis revealed that this successful transition was related with a shift in ammonium oxidizing archaea dominating ammonia oxidizing bacteria, while for nitrite oxidation Nitrospira spp. was constantly more abundant than Nitrobacter spp.. This observation was accompanied with an increase in observed sludge yield and a shift in maximal optimum temperature, determined with ex-situ temperature sensitivity measurements, predicting an upcoming reactor failure at higher temperature. Overall, this study achieved nitrification at 49 °C within 150 days by gradual adaptation of mesophilic sludge, and showed that ex-situ temperature sensitivity screening can be used to monitor and steer the transition process. Copyright © 2016 Elsevier Ltd. All rights reserved.

[Effect of prescribed burning on grassland nitrogen gross mineralization and nitrification].

Science.gov (United States)

Li, Yuzhong; Zhu, Tingcheng; Li, Jiandong; Zhou, Daowei

2003-02-01

The seasonal dynamics of nitrogen gross mineralization, nitrification, and mineral nitrogen consumption rates in burned and unburned Leymus chinensis grasslands were studied with 15N pool dilution technique. The results indicated that the gross mineralization and nitrification rates in burned area were higher than those in unburned area in April and May, and lower than those in unburned area in September. NH4(+)-N consumption rates were higher than unburned area in April and May, and lower in September. NO3(-)-N consumption rates were higher than control in April and May, and lower than control in July and September. The NH4(+)-N concentrations were higher in burned area in April, May and July, and no difference in September. NO3(-)-N concentrations were no difference between burned and unburned areas in April and May, and higher in burned areas in July and September.

Controls of oxygen isotope ratios of nitrate formed during nitrification in soils

International Nuclear Information System (INIS)

Mayer, B.; Bollwerk, S.M.; Vorhoff, B.; Mansfeldt, T.; Veizer, J.

1999-01-01

The isotopic composition of nitrate is increasingly used to determine sources and transformations of nitrogen in terrestrial and aquatic ecosystems. Oxygen isotope ratios of nitrate appear to be particularly useful, since they allow the differentiation between nitrate from atmospheric deposition (δ 18 O nitrate between +25 and +70 per mille), nitrate from fertilizers (δ 18 O nitrate +23 per mille), and nitrate derived from nitrification processes in soils (δ 18 O nitrate 3 molecule derive from H 2 O (with negative δ 18 O values dependent upon location) and one oxygen derives from atmospheric O 2 (δ 18 O = +23.5 per mille).. The objective of this study was to experimentally determine the extent to which water oxygen controls the δ 18 O value of nitrate, which is formed during nitrification in soils

Modelling and simulation of a nitrification biofilter for drinking water ...

African Journals Online (AJOL)

For the purification of pure and microbiologically safe drinking water, different treatment steps are necessary. One of those steps is the removal of ammonium, which can, e.g. be accomplished through nitrification in a biofilter. In this study, a model for such a nitrifying biofilter was developed and the model was ...

Challenges in using allylthiourea and chlorate as specific nitrification inhibitors

DEFF Research Database (Denmark)

Tatari, Karolina; Gülay, Arda; Thamdrup, B.

2017-01-01

Allylthiourea (ATU) and chlorate (ClO3-) are often used to selectively inhibit nitritation and nitratation. In this work we identified challenges with use of these compounds in inhibitory assays with filter material from a biological rapid sand filter for groundwater treatment. Inhibition...... was stronger at higher ATU levels and resulted in no NH4+ detection at 0.5 mM ATU. ClO3- at typical concentrations for inhibition assays (1-10 mM) inhibited nitratation by less than 6%, while nitritation was instead inhibited by 91% when NH4+ was supplied. On the other hand, nitratation was inhibited by 67......-71% at 10-20 mM ClO3- when NO2- was supplied, suggesting significant nitratation inhibition at higher NO2- concentrations. No chlorite (ClO2-) was detected in the effluent, and thus we could not confirm that nitritation inhibition was caused by ClO3- reduction to ClO2-. In conclusion, ATU and ClO3- should...

Influence of dissolved oxygen on the nitrification kinetics in a circulating bed biofilm reactor

Energy Technology Data Exchange (ETDEWEB)

Nogueira, R.; Melo, L.F. [University of Minho, Braga (Portugal). Dept. Bioengineering; Lazarova, V.; Manem, J. [Centre of International Research for Water and Environment (CIRSEE), Lyonnaise des Eaux, Le Pecq (France)

1998-12-01

The influence of dissolved oxygen concentration on the nitrification kinetics was studied in the circulating bed reactor (CBR). The study was partly performed at laboratory scale with synthetic water, and partly at pilot scale with secondary effluent as feed water. The nitrification kinetics of the laboratory CBR as a function of the oxygen concentration can be described according to the half order and zero order rate equations of the diffusion-reaction model applied to porous catalysts. When oxygen was the rate limiting substrate, the nitrification rate was close to a half order function of the oxygen concentration. The average oxygen diffusion coefficient estimated by fitting the diffusion-reaction model to the experimental results was around 66% of the respective value in water. The experimental results showed that either the ammonia or the oxygen concentration could be limiting for the nitrification kinetics. The latter occurred for an oxygen to ammonia concentration ratio below 1.5-2 gO{sub 2}/gN-NH{sub 4}{sup +} for both laboratory and pilot scale reactors. The volumetric oxygen mass transfer coefficient (k{sub L}a) determined in the laboratory scale reactor was 0.017 s{sup -1} for a superficial air velocity of 0.02 m s{sup -1}, and the one determined in the pilot scale reactor was 0.040 s{sup -1} for a superficial air velocity of 0.031 m s{sup -1}. The k{sub L}a for the pilot scale reactor did not change significantly after biofilm development, compared to the value measured without biofilm. (orig.) With 7 figs., 5 tabs., 24 refs.

Characterization of novel Bacillus strain N31 from mariculture water capable of halophilic heterotrophic nitrification-aerobic denitrification.

Science.gov (United States)

Huang, Fei; Pan, Luqing; Lv, Na; Tang, Xianming

2017-11-01

The development of an intensive aquaculture industry has been accompanied by increasing environmental impacts, especially nitrogen pollution. In this study, a novel halophilic bacterium capable of heterotrophic nitrification and aerobic denitrification was isolated from mariculture water and identified as Bacillus litoralis N31. The efficiency of ammonium, nitrite and nitrate removal by N31 were 86.3%, 89.3% and 89.4%, respectively, after a 48-h cultivation in sole N-source medium with initial nitrogen approximately 20 mg/L. However, ammonium was removed preferentially, and no obvious nitrite accumulated during the simultaneous nitrification and denitrification process in mixed N-source media. The existence of hao, napA and nirS genes further proved the heterotrophic nitrification-aerobic denitrification capability of N31. The optimal conditions for ammonium removal were 30°C, initial pH 7.5-8.5, C/N ratio 5-20 and salinity 30-40‰, and the nitrification rate of N31 increased with increasing initial [Formula: see text] from 10 to 250 mg/L. Biosecurity assessment with shrimp indicated that strain N31 could be applied in the marine aquaculture industry safely for culture water remediation and effluent treatment. Copyright © 2017 The Society for Biotechnology, Japan. Published by Elsevier B.V. All rights reserved.

Estimation of nitrification capacity of rock media trickling filters in ...

African Journals Online (AJOL)

To address this deficiency, a full-scale ENBNRAS prototype was implemented at the Daspoort Wastewater Treatment Works (DWWTW) in Tshwane, South Africa. In this investigation an average apparent nitrification capacity of approximately 1.25 to 1.29 gN per m2 of media surface area per day [gN/(ms2Ed)] ammonia ...

Impact of direct greenhouse gas emissions on the carbon footprint of water reclamation processes employing nitrification-denitrification.

Science.gov (United States)

Schneider, Andrew G; Townsend-Small, Amy; Rosso, Diego

2015-02-01

Water reclamation has the potential to reduce water supply demands from aquifers and more energy-intensive water production methods (e.g., seawater desalination). However, water reclamation via biological nitrification-denitrification is also associated with the direct emission of the greenhouse gases (GHGs) CO₂, N₂O, and CH₄. We quantified these direct emissions from the nitrification-denitrification reactors of a water reclamation plant in Southern California, and measured the (14)C content of the CO₂ to distinguish between short- and long-lived carbon. The total emissions were 1.5 (±0.2) g-fossil CO₂ m(-3) of wastewater treated, 0.5 (±0.1) g-CO₂-eq of CH₄ m(-3), and 1.8 (±0.5) g-CO₂-eq of N₂O m(-3), for a total of 3.9 (±0.5) g-CO₂-eqm(-3). This demonstrated that water reclamation can be a source of GHGs from long lived carbon, and thus a candidate for GHG reduction credit. From the (14)C measurements, we found that between 11.4% and 15.1% of the CO₂ directly emitted was derived from fossil sources, which challenges past assumptions that the direct CO₂ emissions from water reclamation contain only modern carbon. A comparison of our direct emission measurements with estimates of indirect emissions from several water production methods, however, showed that the direct emissions from water reclamation constitute only a small fraction of the plant's total GHG footprint. Copyright © 2014 Elsevier B.V. All rights reserved.

Nitrous oxide production by nitrification and denitrification in the Eastern Tropical South Pacific oxygen minimum zone

Science.gov (United States)

Ji, Qixing; Babbin, Andrew R.; Jayakumar, Amal; Oleynik, Sergey; Ward, Bess B.

2015-12-01

The Eastern Tropical South Pacific oxygen minimum zone (ETSP-OMZ) is a site of intense nitrous oxide (N2O) flux to the atmosphere. This flux results from production of N2O by nitrification and denitrification, but the contribution of the two processes is unknown. The rates of these pathways and their distributions were measured directly using 15N tracers. The highest N2O production rates occurred at the depth of peak N2O concentrations at the oxic-anoxic interface above the oxygen deficient zone (ODZ) because slightly oxygenated waters allowed (1) N2O production from both nitrification and denitrification and (2) higher nitrous oxide production yields from nitrification. Within the ODZ proper (i.e., anoxia), the only source of N2O was denitrification (i.e., nitrite and nitrate reduction), the rates of which were reflected in the abundance of nirS genes (encoding nitrite reductase). Overall, denitrification was the dominant pathway contributing the N2O production in the ETSP-OMZ.

Subsurface aeration of anaerobic groundwater : iron colloid formation and the nitrification process

NARCIS (Netherlands)

Wolthoorn, A.

2003-01-01

Keywords: Iron, anaerobic groundwater, groundwater purification, heterogeneous oxidation, iron colloid formation, electron microscopy, nitrification In anaerobic groundwater iron and ammonium can be found in relatively high concentrations. These substances need to be removed when groundwater is used

Insights on the marine microbial nitrogen cycle from isotopic approaches to nitrification

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Karen L Casciotti

2012-10-01

Full Text Available The microbial nitrogen (N cycle involves a variety of redox processes that control the availability and speciation of N in the environment and are involved with the production of nitrous oxide (N2O, a climatically important greenhouse gas. Isotopic measurements of ammonium (NH4+, nitrite (NO2-, nitrate (NO3-, and N2O can now be used to track the cycling of these compounds and to infer their sources and sinks, which has lead to new and exciting discoveries. For example, dual isotope measurements of NO3- and NO2- have shown that there is NO3- regeneration in the ocean’s euphotic zone, as well as in and around oxygen deficient zones, indicating that nitrification may play more roles in the ocean’s N cycle than generally thought. Likewise, the inverse isotope effect associated with NO2- oxidation yields unique information about the role of this process in NO2- cycling in the primary and secondary NO2- maxima. Finally, isotopic measurements of N2O in the ocean are indicative of an important role for nitrification in its production. These interpretations rely on knowledge of the isotope effects for the underlying microbial processes, in particular ammonia oxidation and nitrite oxidation. Here we review the isotope effects involved with the nitrification process, the insights provided by this information, and provide a prospectus for future work in this area.

Insights on the marine microbial nitrogen cycle from isotopic approaches to nitrification.

Science.gov (United States)

Casciotti, Karen L; Buchwald, Carolyn

2012-01-01

The microbial nitrogen (N) cycle involves a variety of redox processes that control the availability and speciation of N in the environment and that are involved with the production of nitrous oxide (N(2)O), a climatically important greenhouse gas. Isotopic measurements of ammonium (NH(+) (4)), nitrite (NO(-) (2)), nitrate (NO(-) (3)), and N(2)O can now be used to track the cycling of these compounds and to infer their sources and sinks, which has lead to new and exciting discoveries. For example, dual isotope measurements of NO(-) (3) and NO(-) (2) have shown that there is NO(-) (3) regeneration in the ocean's euphotic zone, as well as in and around oxygen deficient zones (ODZs), indicating that nitrification may play more roles in the ocean's N cycle than generally thought. Likewise, the inverse isotope effect associated with NO(-) (2) oxidation yields unique information about the role of this process in NO(-) (2) cycling in the primary and secondary NO(-) (2) maxima. Finally, isotopic measurements of N(2)O in the ocean are indicative of an important role for nitrification in its production. These interpretations rely on knowledge of the isotope effects for the underlying microbial processes, in particular ammonia oxidation and nitrite oxidation. Here we review the isotope effects involved with the nitrification process and the insights provided by this information, then provide a prospectus for future work in this area.

The side effects of nitrification inhibitors on leaching water and soil salinization in a field experiment

Energy Technology Data Exchange (ETDEWEB)

Diez, J. A.; Arauzo, M.; Hernaiz, P.; Sanz, A.

2010-07-01

In experiments carried out in greenhouses, some authors have shown that ammonium sulphate induces greater soil acidity and salinity than other sources of N. Moreover, nitrification inhibitors (NI) tend to cause ammonium to accumulate in soil by retarding its oxidation to nitrate. This accumulated ammonium would also have an effect on soil salinity. Consequently, the aim of this paper was to evaluate the soil and leaching water salinization effects associated with adding NI, dicyandiamide (DCD) and dimethylpyrazole-phosphate (DMPP) to ammonium sulphate nitrate (ASN) fertilizer. This experiment was carried out in the field with an irrigated maize crop. Drainage and Na concentration were measured during both seasons (2006 and 2007) and leached Na was determined. The treatments with NI (DCD and DMPP) were associated with greater Na concentrations in soil solutions and consequently higher rates of Na leaching (in 2007, ASN-DCD 1,292 kg Na ha{sup -}1, ASN-DMPP 1,019 kg Na ha{sup -}1). A treatment involving only ASN also increased the Na concentration in soil and the amount of Na leached in relation to the Control (in 2007, ASN 928 kg Na ha{sup -}1 and Control 587 kg Na ha{sup -}1). The increase in the ammonium concentration in the soil due to the NI treatments could have been the result of the displacement of Na ions from the soil exchange complex through a process which finally led to an increase in soil salinity. Treatments including ammonium fertilizer formulated with NI produced a greater degree of soil salinization due to the presence of ammonium from the fertilizer and accumulated ammonium from the nitrification inhibition. (Author) 31 refs.

Nitrification and ammonium dynamics in Taihu Lake, China: seasonal competition for ammonium between nitrifiers and cyanobacteria

Science.gov (United States)

Hampel, Justyna J.; McCarthy, Mark J.; Gardner, Wayne S.; Zhang, Lu; Xu, Hai; Zhu, Guangwei; Newell, Silvia E.

2018-02-01

Taihu Lake is hypereutrophic and experiences seasonal, cyanobacterial harmful algal blooms. These Microcystis blooms produce microcystin, a potent liver toxin, and are linked to anthropogenic nitrogen (N) and phosphorus (P) loads to lakes. Microcystis spp. cannot fix atmospheric N and must compete with ammonia-oxidizing and other organisms for ammonium (NH4+). We measured NH4+ regeneration and potential uptake rates and total nitrification using stable-isotope techniques. Nitrification studies included abundance of the functional gene for NH4+ oxidation, amoA, for ammonia-oxidizing archaea (AOA) and bacteria (AOB). Potential NH4+ uptake rates ranged from 0.02 to 6.80 µmol L-1 h-1 in the light and from 0.05 to 3.33 µmol L-1 h-1 in the dark, and NH4+ regeneration rates ranged from 0.03 to 2.37 µmol L-1 h-1. Nitrification rates exceeded previously reported rates in most freshwater systems. Total nitrification often exceeded 200 nmol L-1 d-1 and was > 1000 nmol L-1 d-1 at one station near a river discharge. AOA amoA gene copies were more abundant than AOB gene copies (p Internal NH4+ regeneration exceeded external N loading to the lake by a factor of 2 but was ultimately fueled by external N loads. Our results thus support the growing literature calling for watershed N loading reductions in concert with existing management of P loads.

Nitrification of leachates from manure composting under field conditions and their use in horticulture.

Science.gov (United States)

Cáceres, Rafaela; Magrí, Albert; Marfà, Oriol

2015-10-01

This work aimed to demonstrate the feasibility of nitrification applied to the treatment of leachates formed during composting of cattle and pig manure in order to promote their further use as liquid fertilizer in horticulture. Nitrification trials were successfully conducted in summer and winter seasons under Mediterranean climate conditions. Subsequently, effect of using the nitrified effluents as nutritive solution in the fertigation of lettuce (Lactuca sativa L.) was assessed in terms of productivity and nutrient uptake. Similar productivities were obtained when using the nitrified effluents and a standard nutritive solution. However, results also evidenced high nutrient uptake, which indicates that dosage should be adjusted to culture requirements. Copyright © 2015 Elsevier Ltd. All rights reserved.

Effect of temperate climate tree species on gross ammonification, gross nitrification and N2O formation

Science.gov (United States)

Brüggemann, N.; Rosenkranz, P.; Papen, H.; Butterbach-Bahl, K.

2003-04-01

Microbial nitrogen turnover processes in the soil, like ammonification, nitrification and denitrification, play an important role in the formation of nitrous oxide (N2O): (i) ammonification, because it releases nitrogen from organic material in the form of ammonium (NH4+), which in turn can serve as substrate for nitrification; (ii) nitrification itself (i.e. the turnover of NH4+ to nitrate, NO3-), during which nitric oxide (NO) and N2O can be released as by-products at varying ratios; (iii) denitrification, in which NO3- serves as electron acceptor and is converted to molecular nitrogen (N2) via NO and N2O as intermediates, that can also be partially lost to the atmosphere. Temperate forest soils are a substantial source of atmospheric N2O contributing up to 10% to the total atmospheric N2O budget. However, this figure is afflicted with a huge uncertainty due to a number of factors governing the soil N2O formation, consumption, release and uptake, which are not fully understood at present. To one of these factors belongs the influence of the tree species on nitrogen turnover processes in the soil and the formation of N trace gases related with them. The aim of the present work was to analyse this tree species effect for the temperate climate region. For this purpose the effect of five different temperate tree species, having the same age and growing on the same soil in direct vicinity to each other, on gross ammonification and gross nitrification as well as on N2O formation was investigated. The trees (common beech, Fagus sylvatica; pedunculate oak, Quercus robur; Norway spruce, Picea abies; Japanese larch, Larix leptolepis; mountain pine, Pinus mugo) were part of a species trial in Western Jutland, Denmark, established in 1965 on a former sandy heathland. Samples from the soil under these five tree species were taken in spring and in summer 2002, respectively, differentiating between organic layer and mineral soil. The gross rates of ammonification as well of

Effects of moisture level and potassium on NH4+ nitrification and ...

African Journals Online (AJOL)

To understand the impact of moisture level and potassium on NH4+ nitrification a greenhouse and laboratory studies were conducted using surface soil of Typic Hapludert (0–30 cm) of Ginchi, central Ethiopia. The treatments were two levels of moisture and three levels of fertilizer (six combinations replicated three times).

A cross-site comparison of factors influencing soil nitrification rates in northeastern USA forested watersheds

Science.gov (United States)

Ross, D.S.; Wemple, B.C.; Jamison, A.E.; Fredriksen, G.; Shanley, J.B.; Lawrence, G.B.; Bailey, S.W.; Campbell, J.L.

2009-01-01

Elevated N deposition is continuing on many forested landscapes around the world and our understanding of ecosystem response is incomplete. Soil processes, especially nitrification, are critical. Many studies of soil N transformations have focused on identifying relationships within a single watershed but these results are often not transferable. We studied 10 small forested research watersheds in the northeastern USA to determine if there were common factors related to soil ammonification and nitrification. Vegetation varied between mixed northern hardwoods and mixed conifers. Watershed surface soils (Oa or A horizons) were sampled at grid or transect points and analyzed for a suite of chemical characteristics. At each sampling point, vegetation and topographic metrics (field and GIS-based) were also obtained. Results were examined by watershed averages (n = 10), seasonal/watershed averages (n = 28), and individual sampling points (n = 608). Using both linear and tree regression techniques, the proportion of conifer species was the single best predictor of nitrification rates, with lower rates at higher conifer dominance. Similar to other studies, the soil C/N ratio was also a good predictor and was well correlated with conifer dominance. Unlike other studies, the presence of Acer saccharum was not by itself a strong predictor, but was when combined with the presence of Betula alleghaniensis. Topographic metrics (slope, aspect, relative elevation, and the topographic index) were not related to N transformation rates across the watersheds. Although found to be significant in other studies, neither soil pH, Ca nor Al was related to nitrification. Results showed a strong relationship between dominant vegetation, soil C, and soil C/N. ?? 2008 Springer Science+Business Media, LLC.

Inhibition of survivin influences the biological activities of canine histiocytic sarcoma cell lines.

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Hiroki Yamazaki

Full Text Available Canine histiocytic sarcoma (CHS is an aggressive malignant neoplasm that originates from histiocytic lineage cells, including dendritic cells and macrophages, and is characterized by progressive local infiltration and a very high metastatic potential. Survivin is as an apoptotic inhibitory factor that has major functions in cell proliferation, including inhibition of apoptosis and regulation of cell division, and is expressed in most types of human and canine malignant neoplasms, including melanoma and osteosarcoma. To investigate whether survivin was expressed at high levels in CHS and whether its expression was correlated with the aggressive biological behavior of CHS, we assessed relation between survivin expression and CHS progression, as well as the effects of survivin inhibition on the biological activities of CHS cells. We comparatively analyzed the expression of 6 selected anti-apoptotic genes, including survivin, in specimens from 30 dogs with histiocytic sarcoma and performed annexin V staining to evaluate apoptosis, methylthiazole tetrazolium assays to assess cell viability and chemosensitivity, and latex bead assays to measure changes in phagocytic activities in 4 CHS cell lines and normal canine fibroblasts transfected with survivin siRNA. Survivin gene expression levels in 30 specimens were significantly higher than those of the other 6 genes. After transfection with survivin siRNA, apoptosis, cell growth inhibition, enhanced chemosensitivity, and weakened phagocytic activities were observed in all CHS cell lines. In contrast, normal canine fibroblasts were not significantly affected by survivin knockdown. These results suggested that survivin expression may mediate the aggressive biological activities of CHS and that survivin may be an effective therapeutic target for the treatment of CHS.

Simultaneous heterotrophic nitrification and aerobic denitrification by the marine origin bacterium Pseudomonas sp. ADN-42.

Science.gov (United States)

Jin, Ruofei; Liu, Tianqi; Liu, Guangfei; Zhou, Jiti; Huang, Jianyu; Wang, Aijie

2015-02-01

Recent research has highlighted the existence of some bacteria that are capable of performing heterotrophic nitrification and have a phenomenal ability to denitrify their nitrification products under aerobic conditions. A high-salinity-tolerant strain ADN-42 was isolated from Hymeniacidon perleve and found to display high heterotrophic ammonium removal capability. This strain was identified as Pseudomonas sp. via 16S rRNA gene sequence analysis. Gene cloning and sequencing analysis indicated that the bacterial genome contains N2O reductase function (nosZ) gene. NH3-N removal rate of ADN-42 was very high. And the highest removal rate was 6.52 mg/L · h in the presence of 40 g/L NaCl. Under the condition of pure oxygen (DO >8 mg/L), NH3-N removal efficiency was 56.9 %. Moreover, 38.4 % of oxygen remained in the upper gas space during 72 h without greenhouse gas N2O production. Keeping continuous and low level of dissolved oxygen (DO <3 mg/L) was helpful for better denitrification performance. All these results indicated that the strain has heterotrophic nitrification and aerobic denitrification abilities, which guarantee future application in wastewater treatment.

Comparison of Simultaneous Nitrification and Denitrification for Three Different Reactors

Directory of Open Access Journals (Sweden)

W. Khanitchaidecha

2015-01-01

Full Text Available Discharge of high NH4-N containing wastewater into water bodies has become a critical and serious issue due to its negative impact on water and environmental quality. In this research, the performance of three different reactors was assessed and compared with regard to the removal of NH4-N from wastewater. The highest nitrogen removal efficiency of 98.3% was found when the entrapped sludge reactor (ESR, in which the sludge was entrapped in polyethylene glycol polymer, was used. Under intermittent aeration, nitrification and denitrification occurred simultaneously in the aerobic and anaerobic periods. Moreover, internal carbon was consumed efficiently for denitrification. On the other hand, internal carbon consumption was not found to occur in the suspended sludge reactor (SSR and the mixed sludge reactor (MSR and this resulted in nitrogen removal efficiencies of SSR and MSR being 64.7 and 45.1%, respectively. Nitrification and denitrification were the main nitrogen removal processes in the aerobic and anaerobic periods, respectively. However, due to the absence of sufficient organic carbon, denitrification was uncompleted resulting in high NO3-N contents in the effluent.

Integrated electrochemical-biological process as an alternative mean for ammonia monitoring during anaerobic digestion of organic wastes

DEFF Research Database (Denmark)

Zhao, Nannan; Li, Xiaohu; Jin, Xiangdan

2017-01-01

Ammonia monitoring is important to control anaerobic digestion (AD) process due to inhibition effect. Here, an electrolysis cell (EC) was integrated with a complete nitrification reactor as an alternative approach for online monitoring of ammonia during AD processes. The AD effluent was pumped...... into nitrification reactor to convert ammonia to nitrate, followed by the introduction of nitrate-rich effluent to EC cathode. It was first evaluated with synthetic ammonia-rich digesters and was observed that the current at 5 min were linearly corresponding to the ammonia levels (from 0 to 7.5 mM NH4+-N, R2....... The simple and reliable biosensor showed great promising for online ammonia monitoring of AD processes....

From Earth to Space: Application of Biological Treatment for the Removal of Ammonia from Water

Science.gov (United States)

Pickering, Karen; Adam, Niklas; White, Dawn; Ghosh, Amlan; Seidel, Chad

2014-01-01

Managing ammonia is often a challenge in both drinking water and wastewater treatment facilities. Ammonia is unregulated in drinking water, but its presence may result in numerous water quality issues in the distribution system such as loss of residual disinfectant, nitrification, and corrosion. Ammonia concentrations need to be managed in wastewater effluent to sustain the health of receiving water bodies. Biological treatment involves the microbiological oxidation of ammonia to nitrate through a two-step process. While nitrification is common in the environment, and nitrifying bacteria can grow rapidly on filtration media, appropriate conditions, such as the presence of dissolved oxygen and required nutrients, need to be established. This presentation will highlight results from two ongoing research programs - one at NASA's Johnson Space Center, and the other at a drinking water facility in California. Both programs are designed to demonstrate nitrification through biological treatment. The objective of NASA's research is to be able to recycle wastewater to potable water for spaceflight missions. To this end, a biological water processor (BWP) has been integrated with a forward osmosis secondary treatment system (FOST). Bacteria mineralize organic carbon to carbon dioxide as well as ammonia-nitrogen present in the wastewater to nitrogen gas, through a combination of nitrification and denitrification. The effluent from the BWP system is low in organic contaminants, but high in total dissolved solids. The FOST system, integrated downstream of the BWP, removes dissolved solids through a combination of concentration-driven forward osmosis and pressure driven reverse osmosis. The integrated system testing planned for this year is expected to produce water that requires only a polishing step to meet potable water requirements for spaceflight. The pilot study in California is being conducted on Golden State Water Company's Yukon wells that have hydrogen sulfide odor

An assessment of nitrification inhibitors to reduce nitrous oxide emissions from UK agriculture

International Nuclear Information System (INIS)

Misselbrook, T H; Cardenas, L M; Camp, V; Thorman, R E; Williams, J R; Rollett, A J; Chambers, B J

2014-01-01

A trial was conducted consisting of 14 experiments across sites in England of contrasting soil type and annual rainfall to assess the effectiveness of nitrification inhibitors (predominantly dicyandiamide (DCD) but limited assessment also of 3, 4-dimethylpyrazole phosphate (DMPP) and a commercial product containing two pyrazole derivatives) in reducing direct nitrous oxide (N 2 O) emissions from fertilizer nitrogen (N), cattle urine and cattle slurry applications to land. Measurements were also made of the impact on ammonia (NH 3 ) volatilization, nitrate (NO 3 − ) leaching, crop yield and crop N offtake. DCD proved to be very effective in reducing direct N 2 O emissions following fertilizer and cattle urine applications, with mean reduction efficiencies of 39, 69 and 70% for ammonium nitrate, urea and cattle urine, respectively. When included with cattle slurry a mean, non-significant reduction of 56% was observed. There were no N 2 O emission reductions observed from the limited assessments of the other nitrification inhibitors. Generally, there were no impacts of the nitrification inhibitors on NH 3 volatilization, NO 3 − leaching, crop yield or crop N offtake. Use of DCD could give up to 20% reduction in N 2 O emissions from UK agriculture, but cost-effective delivery mechanisms are required to encourage adoption by the sector. Direct N 2 O emissions from the studied sources were substantially lower than IPCC default values and development of UK country-specific emission factors for use in inventory compilation is warranted. (paper)

Activating and inhibiting connections in biological network dynamics

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Knight Rob

2008-12-01

Full Text Available Abstract Background Many studies of biochemical networks have analyzed network topology. Such work has suggested that specific types of network wiring may increase network robustness and therefore confer a selective advantage. However, knowledge of network topology does not allow one to predict network dynamical behavior – for example, whether deleting a protein from a signaling network would maintain the network's dynamical behavior, or induce oscillations or chaos. Results Here we report that the balance between activating and inhibiting connections is important in determining whether network dynamics reach steady state or oscillate. We use a simple dynamical model of a network of interacting genes or proteins. Using the model, we study random networks, networks selected for robust dynamics, and examples of biological network topologies. The fraction of activating connections influences whether the network dynamics reach steady state or oscillate. Conclusion The activating fraction may predispose a network to oscillate or reach steady state, and neutral evolution or selection of this parameter may affect the behavior of biological networks. This principle may unify the dynamics of a wide range of cellular networks. Reviewers Reviewed by Sergei Maslov, Eugene Koonin, and Yu (Brandon Xia (nominated by Mark Gerstein. For the full reviews, please go to the Reviewers' comments section.

Lead toxicity thresholds in 17 Chinese soils based on substrate-induced nitrification assay.

Science.gov (United States)

Li, Ji; Huang, Yizong; Hu, Ying; Jin, Shulan; Bao, Qiongli; Wang, Fei; Xiang, Meng; Xie, Huiting

2016-06-01

The influence of soil properties on toxicity threshold values for Pb toward soil microbial processes is poorly recognized. The impact of leaching on the Pb threshold has not been assessed systematically. Lead toxicity was screened in 17 Chinese soils using a substrate-induced nitrification (SIN) assay under both leached and unleached conditions. The effective concentration of added Pb causing 50% inhibition (EC50) ranged from 185 to >2515mg/kg soil for leached soil and 130 to >2490mg/kg soil for unleached soil. These results represented >13- and >19-fold variations among leached and unleached soils, respectively. Leaching significantly reduced Pb toxicity for 70% of both alkaline and acidic soils tested, with an average leaching factor of 3.0. Soil pH and CEC were the two most useful predictors of Pb toxicity in soils, explaining over 90% of variance in the unleached EC50 value. The relationships established in the present study predicted Pb toxicity within a factor of two of measured values. These relationships between Pb toxicity and soil properties could be used to establish site-specific guidance on Pb toxicity thresholds. Copyright © 2016. Published by Elsevier B.V.

Analysis of Microbial Communities in Biofilms from CSTR-Type Hollow Fiber Membrane Biofilm Reactors for Autotrophic Nitrification and Hydrogenotrophic Denitrification.

Science.gov (United States)

Shin, Jung-Hun; Kim, Byung-Chun; Choi, Okkyoung; Kim, Hyunook; Sang, Byoung-In

2015-10-01

Two hollow fiber membrane biofilm reactors (HF-MBfRs) were operated for autotrophic nitrification and hydrogenotrophic denitrification for over 300 days. Oxygen and hydrogen were supplied through the hollow fiber membrane for nitrification and denitrification, respectively. During the period, the nitrogen was removed with the efficiency of 82-97% for ammonium and 87-97% for nitrate and with the nitrogen removal load of 0.09-0.26 kg NH4(+)-N/m(3)/d and 0.10-0.21 kg NO3(-)-N/m(3)/d, depending on hydraulic retention time variation by the two HF-MBfRs for autotrophic nitrification and hydrogenotrophic denitrification, respectively. Biofilms were collected from diverse topological positions in the reactors, each at different nitrogen loading rates, and the microbial communities were analyzed with partial 16S rRNA gene sequences in denaturing gradient gel electrophoresis (DGGE). Detected DGGE band sequences in the reactors were correlated with nitrification or denitrification. The profile of the DGGE bands depended on the NH4(+) or NO3(-) loading rate, but it was hard to find a major strain affecting the nitrogen removal efficiency. Nitrospira-related phylum was detected in all biofilm samples from the nitrification reactors. Paracoccus sp. and Aquaspirillum sp., which are an autohydrogenotrophic bacterium and an oligotrophic denitrifier, respectively, were observed in the denitrification reactors. The distribution of microbial communities was relatively stable at different nitrogen loading rates, and DGGE analysis based on 16S rRNA (341f /534r) could successfully detect nitrate-oxidizing and hydrogen-oxidizing bacteria but not ammonium-oxidizing bacteria in the HF-MBfRs.

Purifying capability, enzyme activity, and nitrification potentials in December in integrated vertical flow constructed wetland with earthworms and different substrates.

Science.gov (United States)

Xu, Defu; Gu, Jiaru; Li, Yingxue; Zhang, Yu; Howard, Alan; Guan, Yidong; Li, Jiuhai; Xu, Hui

2016-01-01

The response of purifying capability, enzyme activity, nitrification potentials, and total number of bacteria in the rhizosphere in December to wetland plants, substrates, and earthworms was investigated in integrated vertical flow constructed wetlands (IVFCW). The removal efficiency of total nitrogen (TN), NH4-N, chemical oxygen demand (COD), and total phosphorus (TP) was increased when earthworms were added into IVFCW. A significantly average removal efficiency of N in IVFCW that employed river sand as substrate and in IVFCW that employed a mixture of river sand and Qing sand as substrate was not found. However, the average removal efficiency of P was higher in IVFCW with a mixture of river sand and Qing sand as substrate than in IVFCW with river sand as substrate. Invertase activity in December was higher in IVFCW that used a mixture of river sand and Qing sand as substrate than in IVFCW which used only river sand as substrate. However, urease activity, nitrification potential, and total number of bacteria in December was higher in IVFCW that employed river sand as substrate than in IVFCW with a mixture of river sand and Qing sand as substrate. The addition of earthworms into the integrated vertical flow constructed wetland increased the above-ground biomass, enzyme activity (catalase, urease, and invertase), nitrification potentials, and total number of bacteria in December. The above-ground biomass of wetland plants was significantly positively correlated with urease and nitrification potentials (p earthworms into IVFCW increased enzyme activity and nitrification potentials in December, which resulted in improving purifying capability.

Transport zonation limits coupled nitrification-denitrification in permeable sediments

DEFF Research Database (Denmark)

Kessler, Adam John; Glud, R.N.; Cardenas, M.B.

2013-01-01

- and N-15-N-2 gas. The measured two-dimensional profiles correlate with computational model simulations, showing a deep pool of N-2 gas forming, and being advected to the surface below ripple peaks. Further isotope pairing calculations on these data indicate that coupled nitrification......-denitrification is severely limited in permeable sediments because the flow and transport field limits interaction between oxic and anoxic pore water. The approach allowed for new detailed insight into subsurface denitrification zones in complex permeable sediments....

Using Pure Cultures to Define the Site Preference of Nitrous Oxide Produced by Microbial Nitrification and Denitrification

Science.gov (United States)

Sutka, R. L.; Breznak, J. A.; Ostrom, N. E.; Ostrom, P. H.; Gandhi, H.

2004-12-01

Defining the site preference of nitrous oxide (N2O) produced in pure culture studies is crucial to interpreting field data. We have previously demonstrated that the intramolecular distribution of nitrogen isotopes (isotopomers) can be used to differentiate N2O produced by nitrifier denitrification and nitrification in cultures of Nitrosomonas europaea. Here, we have expanded on our initial results and evaluated the isotopomeric composition of N2O produced during nitrification and nitrifier denitrification with cultures of Nitrosospira multiformis. In addition, we have analyzed N2O produced during methanotrophic nitrification, denitrification, and fungal denitrification. To evaluate N2O production during nitrification and nitrifier denitrification, we compared the site preference of N2O formed as a result of nitrite reduction and hydroxylamine oxidation with Nitrosomonas europaea and Nitrosospira multiformis. The average site preference of N2O produced by hydroxylamine oxidation was similar for Nitrosomonas europaea (33.0 ± 3.5 ‰ ) and Nitrosospira multiformis (33.1 ± 4.2 ‰ ). Nitrous oxide produced by nitrifier-denitrification by Nitrosomonas europaea and Nitrosospira multiformis had a similar site preference of - 1.4 ± 4.4 ‰ and - 1.1 ± 2.6 ‰ respectively. The results indicate that it is possible to differentiate between N2O produced by nitrite reduction and hydroxylamine oxidation by ammonia oxidizing bacteria. Methanotrophic nitrification was evaluated by analyzing the N2O produced during hydroxylamine oxidation in concentrated cell suspensions of two methane oxidizing bacteria. The site preference of N2O produced by the two methane oxidizers, Methylococcus capsulatus Bath and Methylosinus trichosporium was 31.8 ± 4.7 ‰ and 33.0 ± 4.5 ‰ respectively. The results indicate that a site preference of 33 ‰ is applicable for nitrification regardless of whether a methane oxidizer or ammonia oxidizer is involved in the reaction. To determine the site

Assessing nitrification and denitrification in a paddy soil with different water dynamics and applied liquid cattle waste using the {sup 15}N isotopic technique

Energy Technology Data Exchange (ETDEWEB)

Zhou, Sheng, E-mail: jszs@cc.tuat.ac.jp [Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei, Tokyo 184-8588 (Japan); Eco-environmental Protection Institute, Shanghai Academy of Agricultural Sciences, 1000 Jinqi Road, Shanghai 201403 (China); Sakiyama, Yukina; Riya, Shohei [Graduate School of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei, Tokyo 184-8588 (Japan); Song, Xiangfu [Eco-environmental Protection Institute, Shanghai Academy of Agricultural Sciences, 1000 Jinqi Road, Shanghai 201403 (China); Terada, Akihiko; Hosomi, Masaaki [Institute of Engineering, Tokyo University of Agriculture and Technology, 2-24-16 Naka-cho, Koganei, Tokyo 184-8588 (Japan)

2012-07-15

Using livestock wastewater for rice production in paddy fields can remove nitrogen and supplement the use of chemical fertilizers. However, paddy fields have complicated water dynamics owing to varying characteristics and would influence nitrogen removal through nitrification followed by denitrification. Quantification of nitrification and denitrification is of great importance in assessing the influence of water dynamics on nitrogen removal in paddy fields. In this study, nitrification and nitrate reduction rates with different water dynamics after liquid cattle waste application were evaluated, and the in situ denitrification rate was determined directly using the {sup 15}N isotopic technique in a laboratory experiment. A significant linear regression correlation between nitrification and the nitrate reduction rate was observed and showed different regression coefficients under different water dynamics. The regression coefficient in the continuously flooded paddy soil was higher than in the drained-reflooded paddy soil, suggesting that nitrate would be consumed faster in the flooded paddy soil. However, nitrification was limited and the maximum rate was only 13.3 {mu}g N g{sup -1} day{sup -1} in the flooded paddy soil with rice plants, which limited the supply of nitrate. In contrast, the drained-reflooded paddy soil had an enhanced nitrification rate up to 56.8 {mu}g N g{sup -1} day{sup -1}, which was four times higher than the flooded paddy soil and further stimulated nitrate reduction rates. Correspondingly, the in situ denitrification rates determined directly in the drained-reflooded paddy soil ranged from 5 to 1035 mg N m{sup -2} day{sup -1}, which was higher than the continuously flooded paddy soil (from 5 to 318 mg N m{sup -2} day{sup -1}) during the vegetation period. The nitrogen removal through denitrification accounted for 38.9% and 9.9% of applied nitrogen in the drained-reflooded paddy soil and continuously flooded paddy soil, respectively

Removal of nitrogen and organic matter in a submerged-membrane bioreactor operating in a condition of simultaneous nitrification and denitrification

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Izabela Major Barbosa

2016-04-01

Full Text Available This study evaluated the removal of nitrogen and organic matter in a membrane bioreactor system operating in a condition of simultaneous nitrification and denitrification controlled by intermittent aeration. A submerged-membrane system in a bioreactor was used in a pilot scale to treat domestic wastewater. The dissolved oxygen concentration was maintained between 0.5 and 0.8 mg L-1. The concentration of the mixed liquor suspended solids (MLSS in the system ranged from 1 to 6 g L-1. The system efficiency was evaluated by the removal efficiency of organic matter, quantified by Chemical Oxygen Demand (COD, Biochemical Oxygen Demand (BOD5 and Total Organic Carbon (TOC. Nitrogen removal was assessed by quantifying Total Kjeldahl Nitrogen (TKN and ammonia nitrogen. During the system start-up, the removal efficiencies of COD and NTK were around 90% and 80%, respectively. After the simultaneous nitrification and denitrification (SND conditions were established, the removal efficiencies of COD and NTK were 70% and 99%, respectively. These results showed that sewage treatment with the membrane bioreactor (MBR system, operating with simultaneous nitrification and denitrification conditions, was able to remove organic matter and promote nitrification and denitrification in a single reactor, producing a high-quality permeate.

amoA Gene abundances and nitrification potential rates suggest that benthic ammonia-oxidizing bacteria and not Archaea dominate N cycling in the Colne Estuary, United Kingdom.

Science.gov (United States)

Li, Jialin; Nedwell, David B; Beddow, Jessica; Dumbrell, Alex J; McKew, Boyd A; Thorpe, Emma L; Whitby, Corinne

2015-01-01

Nitrification, mediated by ammonia-oxidizing bacteria (AOB) and ammonia-oxidizing archaea (AOA), is important in global nitrogen cycling. In estuaries where gradients of salinity and ammonia concentrations occur, there may be differential selections for ammonia-oxidizer populations. The aim of this study was to examine the activity, abundance, and diversity of AOA and AOB in surface oxic sediments of a highly nutrified estuary that exhibits gradients of salinity and ammonium. AOB and AOA communities were investigated by measuring ammonia monooxygenase (amoA) gene abundance and nitrification potentials both spatially and temporally. Nitrification potentials differed along the estuary and over time, with the greatest nitrification potentials occurring mid-estuary (8.2 μmol N grams dry weight [gdw](-1) day(-1) in June, increasing to 37.4 μmol N gdw(-1) day(-1) in January). At the estuary head, the nitrification potential was 4.3 μmol N gdw(-1) day(-1) in June, increasing to 11.7 μmol N gdw(-1) day(-1) in January. At the estuary head and mouth, nitrification potentials fluctuated throughout the year. AOB amoA gene abundances were significantly greater (by 100-fold) than those of AOA both spatially and temporally. Nitrosomonas spp. were detected along the estuary by denaturing gradient gel electrophoresis (DGGE) band sequence analysis. In conclusion, AOB dominated over AOA in the estuarine sediments, with the ratio of AOB/AOA amoA gene abundance increasing from the upper (freshwater) to lower (marine) regions of the Colne estuary. These findings suggest that in this nutrified estuary, AOB (possibly Nitrosomonas spp.) were of major significance in nitrification. Copyright © 2015, American Society for Microbiology. All Rights Reserved.

Simultaneous nitrification-denitrification achieved by an innovative internal-loop airlift MBR: comparative study.

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Li, Y Z; He, Y L; Ohandja, D G; Ji, J; Li, J F; Zhou, T

2008-09-01

This study assessed the performance of different single-stage continuous aerated submerged membrane bioreactors (MBR) for nitrogen removal. Almost complete nitrification was achieved in each MBR irrespective of operating mode and biomass system. Denitrification was found to be the rate-limiting step for total nitrogen (T-N) removal. The MBR with internal-loop airlift reactor (ALR) configuration performed better as regards T-N removal compared with continuous stirred-tank reactor (CSTR). It was demonstrated that simultaneous nitrification and denitrification (SND) is the mechanism leading to nitrogen removal and the contribution of microenvironment on SND is more remarkable for the MBRs with hybrid biomass. Macroenvironment analyses showed that gradient distribution of dissolved oxygen (DO) level in airlift MBRs imposed a significant effect on SND. Higher mixed liquor suspended solid (MLSS) concentration led to the improvement in T-N removal by enhancing anoxic microenvironment. Apparent nitrite accumulation coupled with higher nitrogen reduction was accomplished at MLSS concentration exceeded 12.6 g/L.

The effect of soil properties on the toxicity of silver to the soil nitrification process.

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Langdon, Kate A; McLaughlin, Mike J; Kirby, Jason K; Merrington, Graham

2014-05-01

Silver (Ag) is being increasingly used in a range of consumer products, predominantly as an antimicrobial agent, leading to a higher likelihood of its release into the environment. The present study investigated the toxicity of Ag to the nitrification process in European and Australian soils in both leached and unleached conditions. Overall, leaching of soils was found to have a minimal effect on the final toxicity data, with an average leaching factor of approximately 1. Across the soils, the toxicity was found to vary by several orders of magnitude, with concentrations of Ag causing a 50% reduction in nitrification relative to the controls (EC50) ranging from 0.43 mg Ag/kg to >640 mg Ag/kg. Interestingly, the dose-response relationships in most of the soils showed significant stimulation in nitrification at low Ag concentrations (i.e., hormesis), which in some cases produced responses up to double that observed in the controls. Soil pH and organic carbon were the properties found to have the greatest influence on the variations in toxicity thresholds across the soils, and significant relationships were developed that accounted for approximately 90% of the variability in the data. The toxicity relationships developed from the present study will assist in future assessment of potential Ag risks and enable the site-specific prediction of Ag toxicity. © 2014 SETAC.

Drinking Water Microbiome as a Screening Tool for Nitrification in Chloraminated Drinking Water Distribution Systems

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Many water utilities in the US using chloramine as disinfectant treatment in their distribution systems have experienced nitrification episodes, which detrimentally impact the water quality. A chloraminated drinking water distribution system (DWDS) simulator was operated throug...

Investigation on thiosulfate-involved organics and nitrogen removal by a sulfur cycle-based biological wastewater treatment process.

Science.gov (United States)

Qian, Jin; Lu, Hui; Cui, Yanxiang; Wei, Li; Liu, Rulong; Chen, Guang-Hao

2015-02-01

Thiosulfate, as an intermediate of biological sulfate/sulfite reduction, can significantly improve nitrogen removal potential in a biological sulfur cycle-based process, namely the Sulfate reduction-Autotrophic denitrification-Nitrification Integrated (SANI(®)) process. However, the related thiosulfate bio-activities coupled with organics and nitrogen removal in wastewater treatment lacked detailed examinations and reports. In this study, S2O3(2-) transformation during biological SO4(2-)/SO3(2-) co-reduction coupled with organics removal as well as S2O3(2-) oxidation coupled with chemolithotrophic denitrification were extensively evaluated under different experimental conditions. Thiosulfate is produced from the co-reduction of sulfate and sulfite through biological pathway at an optimum pH of 7.5 for organics removal. And the produced S2O3(2-) may disproportionate to sulfide and sulfate during both biological S2O3(2-) reduction and oxidation most possibly carried out by Desulfovibrio-like species. Dosing the same amount of nitrate, pH was found to be the more direct factor influencing the denitritation activity than free nitrous acid (FNA) and the optimal pH for denitratation (7.0) and denitritation (8.0) activities were different. Spiking organics significantly improved both denitratation and denitritation activities while minimizing sulfide inhibition of NO3(-) reduction during thiosulfate-based denitrification. These findings in this study can improve the understanding of mechanisms of thiosulfate on organics and nitrogen removal in biological sulfur cycle-based wastewater treatment. Copyright © 2014 Elsevier Ltd. All rights reserved.

Redistribution of wastewater alkalinity with a microbial fuel cell to support nitrification of reject water.

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Modin, Oskar; Fukushi, Kensuke; Rabaey, Korneel; Rozendal, René A; Yamamoto, Kazuo

2011-04-01

In wastewater treatment plants, the reject water from the sludge treatment processes typically contains high ammonium concentrations, which constitute a significant internal nitrogen load in the plant. Often, a separate nitrification reactor is used to treat the reject water before it is fed back into the plant. The nitrification reaction consumes alkalinity, which has to be replenished by dosing e.g. NaOH or Ca(OH)(2). In this study, we investigated the use of a two-compartment microbial fuel cell (MFC) to redistribute alkalinity from influent wastewater to support nitrification of reject water. In an MFC, alkalinity is consumed in the anode compartment and produced in the cathode compartment. We use this phenomenon and the fact that the influent wastewater flow is many times larger than the reject water flow to transfer alkalinity from the influent wastewater to the reject water. In a laboratory-scale system, ammonium oxidation of synthetic reject water passed through the cathode chamber of an MFC, increased from 73.8 ± 8.9 mgN/L under open-circuit conditions to 160.1 ± 4.8 mgN/L when a current of 1.96 ± 0.37 mA (15.1 mA/L total MFC liquid volume) was flowing through the MFC. These results demonstrated the positive effect of an MFC on ammonium oxidation of alkalinity-limited reject water. Copyright © 2011 Elsevier Ltd. All rights reserved.

Side Effects of Nitrification Inhibitors on Non Target Microbial Processes in Soils

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Johannes Carl Gottlieb Ottow

2011-01-01

Full Text Available Agricultural chemicals have been used extensively in modern agriculture and toxicological studies suggest a great potential for inducing undesirable effects on non target organisms. A model experiment was conducted in order to determine side effects of three nitrification inhibitors (NIs, 3,4dimethylpyrazolephosphate = DMPP, 4-Chlor-methylpyrazole phosphate = ClMPP and dicyandiamide = DCD on non target microbial processes in soils. Side effects and dose response curve of three NIs were quantified under laboratory conditions using silty clay, loam and a sandy soils. Dehydrogenase, dimethylsulfoxide reductase as well as nitrogenase activity (NA and potential denitrification capacity were measured as common and specific non target microbial processes. The influence of 5-1000 times the base concentration, dose response curves were examined, and no observable effect level = NOEL, as well as effective dose ED10 and ED50 (10% and 50% inhibition were calculated. The NOEL for microbial non target processes were about 30–70 times higher than base concentration in all investigated soils. The potential denitrification capacity revealed to be the most sensitive parameter. ClMPP exhibited the strongest influence on the non target microbial processes in the three soils. The NOEL, ED10 and ED50 values were higher in clay than in loamy or sandy soil. The NIs was the most effective in sandy soils.

Nitrogen Removal from Milking Center Wastewater via Simultaneous Nitrification and Denitrification Using a Biofilm Filtration Reactor

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Seung-Gun Won

2015-06-01

Full Text Available Milking center wastewater (MCW has a relatively low ratio of carbon to nitrogen (C/N ratio, which should be separately managed from livestock manure due to the negative impacts of manure nutrients and harmful effects on down-stream in the livestock manure process with respect to the microbial growth. Simultaneous nitrification and denitrification (SND is linked to inhibition of the second nitrification and reduces around 40% of the carbonaceous energy available for denitrification. Thus, this study was conducted to find the optimal operational conditions for the treatment of MCW using an attached-growth biofilm reactor; i.e., nitrogen loading rate (NLR of 0.14, 0.28, 0.43, and 0.58 kg m−3 d−1 and aeration rate of 0.06, 0.12, and 0.24 m3 h−1 were evaluated and the comparison of air-diffuser position between one-third and bottom of the reactor was conducted. Four sand packed-bed reactors with the effective volume of 2.5 L were prepared and initially an air-diffuser was placed at one third from the bottom of the reactor. After the adaptation period of 2 weeks, SND was observed at all four reactors and the optimal NLR of 0.45 kg m−3 d−1 was found as a threshold value to obtain higher nitrogen removal efficiency. Dissolved oxygen (DO as one of key operational conditions was measured during the experiment and the reactor with an aeration rate of 0.12 m3 h−1 showed the best performance of NH4-N removal and the higher total nitrogen removal efficiency through SND with appropriate DO level of ~0.5 mg DO L−1. The air-diffuser position at one third from the bottom of the reactor resulted in better nitrogen removal than at the bottom position. Consequently, nitrogen in MCW with a low C/N ratio of 2.15 was successfully removed without the addition of external carbon sources.

EFFECTS OF NITRIFICATION INHIBITORS ON MINERAL NITROGEN DYNAMICS IN AGRICULTURE SOILS

OpenAIRE

Ferisman Tindaon; Gero Benckiser; ohannes Carl Gottlieb Ottow

2011-01-01

Experiments were conducted under laboratory conditions to elucidate the effect of three nitrification inhibitors viz, 3.4dimethylpyrazo-lephosphate (DMPP), 4-Chlormethylpyrazole (ClMP) and dicyandiamide (DCD) on mineral nitrogen dynamics of (NH4)2SO4 in soil incubated at 25oC in soils. The quantitative determination of ammonium, nitrite and nitrate were carried out spectrophotometrically, while potential denitrify-cation capacity (PDC) was measured gas chromatographically. DMPP, ClMP and DCD ...

Effects of Nitrification Inhibitors on Mineral Nitrogen Dynamics in Agriculture Soils

OpenAIRE

Tindaon, Ferisman; Benckiser, Gero; Ottow, Johannes Carl Gottlieb

2011-01-01

Experiments were conducted under laboratory conditions to elucidate the effect of three nitrification inhibitors viz, 3.4dime-thylpyrazo-lephosphate (DMPP), 4-Chlormethylpyrazole (ClMP) and dicyandiamide (DCD) on mineral nitrogen dynamics of (NH4)2SO4 in soil incubated at 25oC in soils. The quantitative determination of ammonium, nitrite and nitrate were carried out spectrophotometrically, while potential denitrify-cation capacity (PDC) was measured gas chromatographically. DMPP, ClMP and DCD...

Global sensitivity analysis for identifying important parameters of nitrogen nitrification and denitrification under model uncertainty and scenario uncertainty

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Chen, Zhuowei; Shi, Liangsheng; Ye, Ming; Zhu, Yan; Yang, Jinzhong

2018-06-01

Nitrogen reactive transport modeling is subject to uncertainty in model parameters, structures, and scenarios. By using a new variance-based global sensitivity analysis method, this paper identifies important parameters for nitrogen reactive transport with simultaneous consideration of these three uncertainties. A combination of three scenarios of soil temperature and two scenarios of soil moisture creates a total of six scenarios. Four alternative models describing the effect of soil temperature and moisture content are used to evaluate the reduction functions used for calculating actual reaction rates. The results show that for nitrogen reactive transport problem, parameter importance varies substantially among different models and scenarios. Denitrification and nitrification process is sensitive to soil moisture content status rather than to the moisture function parameter. Nitrification process becomes more important at low moisture content and low temperature. However, the changing importance of nitrification activity with respect to temperature change highly relies on the selected model. Model-averaging is suggested to assess the nitrification (or denitrification) contribution by reducing the possible model error. Despite the introduction of biochemical heterogeneity or not, fairly consistent parameter importance rank is obtained in this study: optimal denitrification rate (Kden) is the most important parameter; reference temperature (Tr) is more important than temperature coefficient (Q10); empirical constant in moisture response function (m) is the least important one. Vertical distribution of soil moisture but not temperature plays predominant role controlling nitrogen reaction. This study provides insight into the nitrogen reactive transport modeling and demonstrates an effective strategy of selecting the important parameters when future temperature and soil moisture carry uncertainties or when modelers face with multiple ways of establishing nitrogen

Biofilm Community Dynamics in Bench-Scale Annular Reactors Simulating Arrestment of Chloraminated Drinking Water Nitrification

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Annular reactors (ARs) were used to study biofilm community succession and provide an ecological insight during nitrification arrestment through simultaneously increasing monochloramine (NH2Cl) and chlorine to nitrogen mass ratios, resulting in four operational periods (I to IV)....

Nitrous oxide in the Schelde estuary: production by nitrification and emission to the atmosphere

NARCIS (Netherlands)

De Wilde, H.; De Bie, M.J.M.

2000-01-01

Concentrations of nitrous oxide (N2O), oxygen, nitrate, and ammonium, as well as nitrification activity were determined along the salinity gradient of the Schelde Estuary, Northwest Europe, in October 1993, March 1994, and July 1996, The entire estuary was always supersaturated with N2O.

Use of dissolved inorganic carbon isotopes to track photosynthesis, respiration, and nitrification along a 56 mile transect in the Sacramento River and San Francisco Bay

Science.gov (United States)

Silva, S. R.; Kendall, C.; Peek, S.; Young, M. B.

2013-12-01

A decline in phytoplankton stocks in the San Francisco Bay and Delta is thought to contribute to the pelagic organism decline observed over the past two decades. One factor controlling phytoplankton growth rate is the availability of nutrients. Although there is an excess of nutrients in the Bay and Delta, the type and relative abundance of nutrients is critical to phytoplankton growth. To evaluate the response of phytoplankton to nutrient sources and to better understand phytoplankton dynamics downstream, we tested the hypothesis that the δ13C values of dissolved inorganic carbon (DIC) along with conventional water chemistry analyses will record events such as increased nitrification (related to the Sacramento River Wastewater Treatment Plant ammonium input) and algal blooms, and reflect the balance between photosynthesis and bacterial respiration. Multiple parameters affect [DIC] and its δ13C, including DIC sources, pH, and biological processes. Consumption of CO2 by phytoplankton during photosynthesis and by autotrophic bacteria during nitrification both result in increases in δ13C-DIC. However, photosynthesis and nitrification have very different relationships to chlorophyll and nutrient concentrations. The balance between heterotrophic bacterial respiration and photosynthesis should be reflected in trends in DIC, nutrient, and chlorophyll concentration, and δ13C-DIC. The δ13C of DIC should also be reflected in the δ13C of phytoplankton with approximately a 20 per mil fractionation. Significant deviation in the fractionation factor may indicate local variations in growth rate, nutrient availability, or speciation. Combined, these parameters should provide a gauge of the relative importance of the above mentioned processes. To test this hypothesis, we collected 19 water samples per cruise between July 2012 and July 2013 along a 56 mile transect between Rio Vista on the Sacramento River and San Francisco Bay near Angel Island during 8 cruises on the USGS RV

Profitability of Nitrification Inhibitors for Abatement of Nitrate Leaching on a Representative Dairy Farm in the Waikato Region of New Zealand

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Upa H. Paragahawewa

2011-11-01

Full Text Available Direct policies for the management of nonpoint source pollution are difficult to apply given asymmetric information, spatial and temporal variability, and uncertainty. There is increasing awareness that these limitations may be overcome where profitable mitigation practices are broadly adopted by polluters. Nitrification inhibitors (chemicals applied to paddocks that retard the nitrification process in soils are a rare example of a mitigation practice that reduces pollutant loads and potentially increases farm profit through promoting pasture production. This study investigates their capacity to achieve both goals to inform policy makers and producers of their potential for simultaneously improving farm profit and water quality. With an assumed 10 percent increase in pasture production in response to nitrification inhibitor application, nitrification inhibitors are a profitable innovation because greater pasture production supports higher stocking rates. Nonetheless, their overall impact on farm profit is low, even when the cost of inhibitors or their impact on subsequent pasture production is substantially altered. However, inhibitors are found to be a critical mitigation practice for farmers posed with decreasing leaching loads to satisfy regulatory requirements. These findings suggest that, despite their shortcomings for nonpoint pollution regulation, direct policies appear to be the only way to motivate producers to account for their impact on environmental values given the current lack of profitable mitigations.

Nitrite accumulation from simultaneous free-ammonia and free-nitrous-acid inhibition and oxygen limitation in a continuous-flow biofilm reactor.

Science.gov (United States)

Park, Seongjun; Chung, Jinwook; Rittmann, Bruce E; Bae, Wookeun

2015-01-01

To achieve nitrite accumulation for shortcut biological nitrogen removal (SBNR) in a biofilm process, we explored the simultaneous effects of oxygen limitation and free ammonia (FA) and free nitrous acid (FNA) inhibition in the nitrifying biofilm. We used the multi-species nitrifying biofilm model (MSNBM) to identify conditions that should or should not lead to nitrite accumulation, and evaluated the effectiveness of those conditions with experiments in continuous flow biofilm reactors (CFBRs). CFBR experiments were organized into four sets with these expected outcomes based on the MSNBM as follows: (i) Control, giving full nitrification; (ii) oxygen limitation, giving modest long-term nitrite build up; (iii) FA inhibition, giving no long-term nitrite accumulation; and (iv) FA inhibition plus oxygen limitation, giving major long-term nitrite accumulation. Consistent with MSNBM predictions, the experimental results showed that nitrite accumulated in sets 2-4 in the short term, but long-term nitrite accumulation was maintained only in sets 2 and 4, which involved oxygen limitation. Furthermore, nitrite accumulation was substantially greater in set 4, which also included FA inhibition. However, FA inhibition (and accompanying FNA inhibition) alone in set 3 did not maintained long-term nitrite accumulation. Nitrite-oxidizing bacteria (NOB) activity batch tests confirmed that little NOB or only a small fraction of NOB were present in the biofilms for sets 4 and 2, respectively. The experimental data supported the previous modeling results that nitrite accumulation could be achieved with a lower ammonium concentration than had been required for a suspended-growth process. Additional findings were that the biofilm exposed to low dissolved oxygen (DO) limitation and FA inhibition was substantially denser and probably had a lower detachment rate. © 2014 Wiley Periodicals, Inc.

Side Effects of Nitrification Inhibitors on Non Target Microbial Processes in Soils

OpenAIRE

Johannes Carl Gottlieb Ottow; Gero Benckiser; Ferisman Tindaon

2011-01-01

Agricultural chemicals have been used extensively in modern agriculture and toxicological studies suggest a great potential for inducing undesirable effects on non target organisms. A model experiment was conducted in order to determine side effects of three nitrification inhibitors (NIs, 3,4dimethylpyrazolephosphate = DMPP, 4-Chlormethylpyrazole phosphate = ClMPP and dicyandiamide = DCD) on non target microbial processes in soils. Side effects and dose response curve of three NIs were quanti...

Growth modelling of Nitrosomonas europaea ATCC® 19718 and Nitrobacter winogradskyi ATCC® 25391: A new online indicator of the partial nitrification.

Science.gov (United States)

Cruvellier, Nelly; Poughon, Laurent; Creuly, Catherine; Dussap, C-Gilles; Lasseur, Christophe

2016-11-01

The aim of the present work was to study the growth of two nitrifying bacteria. For modelling the nitrifying subsystem of the MELiSSA loop, Nitrosomonas europaea ATCC® 19718 and Nitrobacter winogradskyi ATCC® 25931 were grown separately and in cocultures. The kinetic parameters of a stoichiometric mass balanced Pirt model were identified: μmax=0.054h(-1), decay rate b=0.003h(-1) and maintenance rate m=0.135gN-NH4(+)·gX(-1)·h(-1) for Nitrosomonas europaea; μmax=0.024h(-1), b=0.001h(-1) and m=0.467gN-NO2(-)·gX(-1)·h(-1) for Nitrobacter winogradskyi. A predictive structured model of nitrification in co-culture was developed. The online evolution of the addition of KOH is correlated to the nitritation; the dissolved oxygen concentration is correlated to both nitritation and nitratation. The model suitably represents these two variables so that transient partial nitrification is assessed. This is a clue for avoiding partial nitrification by predictive functional control. Copyright © 2016 Elsevier Ltd. All rights reserved.

Avaliação de um reator de lodo ativado aplicado à nitrificação utilizando ensaios cinéticos = Evaluation of an activated sludge reactor applied to nitrification using kinetic assays

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Valeria Reginatto

2008-01-01

Full Text Available Neste trabalho, um reator em escala laboratorial de lodo ativado, aplicado ao processo da nitrificação, foi acompanhado por meio de ensaios cinéticos de atividade específica. A atividade de nitrificação da biomassa foi determinada por respirometria nacaracterização do inóculo e na avaliação da biomassa do reator em duas condições: durante a alimentação do reator com meio sintético autotrófico; e após a sua alimentação com efluente de um reator UASB, utilizado para desnitrificação. O reator atingiu uma eficiência em torno de 90% de nitrificação em ambas as condições de operação. O modelo cinético de Andrews, que inclui uma constante da inibição pelo substrato (Ki, ajustou-se melhor aos resultados obtidos nos testes de atividade do que o de Monod. Entretanto, observou-se aumento daconstante de inibição (Ki do lodo após operação do reator em relação ao inóculo, demonstrando a adaptação da biomassa às novas condições (cargas de nitrificação.In this work, an activated sludge lab-scale reactor used fornitrification was monitored by specific activity kinetic assays. The nitrification biomass activity was carried out by respirometric methods in order to characterize the inoculum and the reactor sludge after two different operation conditions: during the feeding of the reactor with synthetic autotrophic medium, and after feeding it with effluent from an UASB reactor used for denitrification. The efficiency of nitrification reached 90% in both operation conditions. Results obtained by the kinetic activity assays were better adjusted by the kinetic model of Andrews, which includes the inhibition constant by the substrate (Ki, than the Monod model. However, an increase was observed in the inhibition constant (Ki of the sludge after the operation of the reactor as compared with the inoculum. This effect demonstrates an adaptation of the biomass to the new nitrification conditions (loading rate.

[Identification and Nitrogen Removal Characteristics of a Heterotrophic Nitrification-Aerobic Denitrification Strain Isolated from Marine Environment].

Science.gov (United States)

Sun, Qing-hua; Yu, De-shuang; Zhang, Pei-yu; Lin, Xue-zheng; Li, Jin

2016-02-15

A heterotrophic nitrification-aerobic denitrification strain named y5 was isolated from marine environment by traditional microbial isolation method using seawater as medium. It was identified as Klebsiella sp. based on the morphological, physiological and 16S rRNA sequence analysis. The experiment results showed that the optimal carbon resource was sodium citrate; the optimal pH was 7.0; and the optimal C/N was 17. The strain could use NH4Cl, NaNO2 and KNO3 as sole nitrogen source, and the removal efficiencies were77.07%, 64.14% and 100% after 36 hours, respectively. The removal efficiency reached 100% after 36 hours in the coexistence of NH4Cl, NaNO2 and KNO3. The results showed that the strain y5 had independent and efficient heterotrophic nitrification and aerobic denitrification activities in high salt wastewater.

Impact of Nitrification on the Formation of N-Nitrosamines and Halogenated Disinfection Byproducts within Distribution System Storage Facilities.

Science.gov (United States)

Zeng, Teng; Mitch, William A

2016-03-15

Distribution system storage facilities are a critical, yet often overlooked, component of the urban water infrastructure. This study showed elevated concentrations of N-nitrosodimethylamine (NDMA), total N-nitrosamines (TONO), regulated trihalomethanes (THMs) and haloacetic acids (HAAs), 1,1-dichloropropanone (1,1-DCP), trichloroacetaldehyde (TCAL), haloacetonitriles (HANs), and haloacetamides (HAMs) in waters with ongoing nitrification as compared to non-nitrifying waters in storage facilities within five different chloraminated drinking water distribution systems. The concentrations of NDMA, TONO, HANs, and HAMs in the nitrifying waters further increased upon application of simulated distribution system chloramination. The addition of a nitrifying biofilm sample collected from a nitrifying facility to its non-nitrifying influent water led to increases in N-nitrosamine and halogenated DBP formation, suggesting the release of precursors from nitrifying biofilms. Periodic treatment of two nitrifying facilities with breakpoint chlorination (BPC) temporarily suppressed nitrification and reduced precursor levels for N-nitrosamines, HANs, and HAMs, as reflected by lower concentrations of these DBPs measured after re-establishment of a chloramine residual within the facilities than prior to the BPC treatment. However, BPC promoted the formation of halogenated DBPs while a free chlorine residual was maintained. Strategies that minimize application of free chlorine while preventing nitrification are needed to control DBP precursor release in storage facilities.

Drinking Water Microbiome as a Screening Tool for Nitrification in Chloraminated Drinking Water Distribution Systems (abstract)

Science.gov (United States)

Many water utilities in the US using chloramine as disinfectant treatment in their distribution systems have experienced nitrification episodes, which detrimentally impact the water quality. Here, we used 16S rRNA sequencing data to generate high-resolution taxonomic profiles of...

Kinetic models for nitrogen inhibition in ANAMMOX and nitrification process on deammonification system at room temperature.

Science.gov (United States)

De Prá, Marina C; Kunz, Airton; Bortoli, Marcelo; Scussiato, Lucas A; Coldebella, Arlei; Vanotti, Matias; Soares, Hugo M

2016-02-01

In this study were fitted the best kinetic model for nitrogen removal inhibition by ammonium and/or nitrite in three different nitrogen removal systems operated at 25 °C: a nitrifying system (NF) containing only ammonia oxidizing bacteria (AOB), an ANAMMOX system (AMX) containing only ANAMMOX bacteria, and a deammonification system (DMX) containing both AOB and ANAMMOX bacteria. NF system showed inhibition by ammonium and was best described by Andrews model. The AMX system showed a strong inhibition by nitrite and Edwards model presented a best system representation. For DMX system, the increased substrate concentration (until 1060 mg NH3-N/L) tested was not limiting for the ammonia consumption rate and the Monod model was the best model to describe this process. The AOB and ANAMMOX sludges combined in the DMX system displayed a better activity, substrate affinity and excellent substrate tolerance than in nitrifying and ANAMMOX process. Copyright © 2015 Elsevier Ltd. All rights reserved.

Succession of Biofilm Microbial Community during Nitrification in Lab-Scale Reactors Simulating Chloraminated Drinking Water Distribution System Conditions: the Impact of Simultaneously Increasing Monochloramine and Chlorine to Nitrogen Mass Ratios

Science.gov (United States)

Chloramination has been shown to promote nitrifying bacteria and 30 to 63% of utility plants using secondary chloramine disinfection experience nitrification episodes. Although nitrifying bacteria are not considered human pathogens, nitrification can affect drinking water qualit...

Inhibitory effect of cyanide on wastewater nitrification determined using SOUR and RNA-based gene-specific assays

Science.gov (United States)

The effect of CN- (CN-) on nitrification was examined with samples from nitrifying wastewater enrichments using two different approaches: by measuring substrate (ammonia) specific oxygen uptake rates (SOUR), and by using RT-qPCR to quantify the transcripts of functional genes inv...

Enhancing nitrification at low temperature with zeolite in a mining operations retention pond

Directory of Open Access Journals (Sweden)

Misha eMiazga-Rodriguez

2012-07-01

Full Text Available Ammonium nitrate explosives are used in mining operations at Diavik Diamond Mines Inc. in the Northwest Territories, Canada. Residual nitrogen is washed into the mine pit and piped to a nearby retention pond where its removal is accomplished by microbial activity prior to a final water treatment step and release into the sub-Arctic lake, Lac de Gras. Microbial removal of ammonium in the retention pond is rapid during the brief ice-free summer, but often slows under ice cover that persists up to nine months of the year. The aluminosilicate mineral zeolite was tested as an additive to retention pond water to increase rates of ammonium removal at 4 °C. Water samples were collected across the length of the retention pond monthly over a year. The structure of the microbial community (bacteria, archaea, and eukarya, as determined by denaturing gradient gel electrophoresis of PCR-amplified small subunit ribosomal RNA genes, was more stable during cold months than during July-September, when there was a marked phytoplankton bloom. Of the ammonia-oxidizing community, only bacterial amoA genes were consistently detected. Zeolite (10 g was added to retention pond water (100 mL amended with 5 mM ammonium and incubated at 12 °C to encourage development of a nitrifying biofilm. The biofilm community was composed of different amoA phylotypes from those identified in gene clone libraries of native water samples. Zeolite biofilm was added to fresh water samples collected at different times of the year, resulting in a significant increase in laboratory measurements of potential nitrification activity at 4 °C. A significant positive correlation between the amount of zeolite biofilm and potential nitrification activity was observed; rates were unaffected in incubations containing 1-20 mM ammonium. Addition of zeolite to retention ponds in cold environments could effectively increase nitrification rates year round by concentrating active nitrifying biomass.

Enhancing nitrification at low temperature with zeolite in a mining operations retention pond.

Science.gov (United States)

Miazga-Rodriguez, Misha; Han, Sukkyun; Yakiwchuk, Brian; Wei, Kai; English, Colleen; Bourn, Steven; Bohnert, Seth; Stein, Lisa Y

2012-01-01

Ammonium nitrate explosives are used in mining operations at Diavik Diamond Mines Inc. in the Northwest Territories, Canada. Residual nitrogen is washed into the mine pit and piped to a nearby retention pond where its removal is accomplished by microbial activity prior to a final water treatment step and release into the sub-Arctic lake, Lac de Gras. Microbial removal of ammonium in the retention pond is rapid during the brief ice-free summer, but often slows under ice cover that persists up to 9 months of the year. The aluminosilicate mineral zeolite was tested as an additive to retention pond water to increase rates of ammonium removal at 4°C. Water samples were collected across the length of the retention pond monthly over a year. The structure of the microbial community (bacteria, archaea, and eukarya), as determined by denaturing gradient gel electrophoresis of PCR-amplified small subunit ribosomal RNA genes, was more stable during cold months than during July-September, when there was a marked phytoplankton bloom. Of the ammonia-oxidizing community, only bacterial amoA genes were consistently detected. Zeolite (10 g) was added to retention pond water (100 mL) amended with 5 mM ammonium and incubated at 12°C to encourage development of a nitrifying biofilm. The biofilm community was composed of different amoA phylotypes from those identified in gene clone libraries of native water samples. Zeolite biofilm was added to fresh water samples collected at different times of the year, resulting in a significant increase in laboratory measurements of potential nitrification activity at 4°C. A significant positive correlation between the amount of zeolite biofilm and potential nitrification activity was observed; rates were unaffected in incubations containing 1-20 mM ammonium. Addition of zeolite to retention ponds in cold environments could effectively increase nitrification rates year-round by concentrating active nitrifying biomass.

Direct contribution of clams (Ruditapes philippinarum) to benthic fluxes, nitrification, denitrification and nitrous oxide emission in a farmed sediment

Science.gov (United States)

Welsh, David T.; Nizzoli, Daniele; Fano, Elisa A.; Viaroli, Pierluigi

2015-03-01

The influence of the manila clam (Ruditapes philippinarum) on N-cycle processes, and oxygen and nutrient fluxes in a farmed sediment was investigated using a multiple core incubation approach and parallel incubations of individual clams. Clam population/biomass density varied ∼8-fold between cores and all sediment-water column solute (O2. N2, N2O, NH4+, NOX and DIN) fluxes and benthic process (N-regeneration, nitrification and denitrification) rates were strongly and significantly correlated with clam density/biomass. Isolated clams exhibited high rates of respiration, N-excretion, nitrification and denitrification of 2050 ± 70, 395 ± 49, 201 ± 42 and 235 ± 40 nmol individual-1 h-1, respectively. The direct contribution of the clams and their associated microbiota to benthic processes was estimated by multiplying the per individual rates by the number of clams in each incubated core. The clams on average directly accounted for 64-133% of total rates of sediment oxygen demand, N-regeneration, nitrification and denitrification, indicating that they regulated processes primarily through their own metabolic activity and that of bacteria that colonise them. Clams and the farmed sediments were significant sources of the greenhouse gas N2O, but this was primarily due to their high nitrification and denitrification rates, rather than high specific N2O yields, as N2O emissions represented farmed sediments had a high denitrification efficiency of 67 ± 10%, but this ecosystem service came at the environmental cost of increased N-regeneration and N2O emission rates. The measured N2O emissions indicate that bivalve aquaculture may be a significant source of N2O. It is therefore recommended that N2O emissions should be included in the impact assessments of current and future bivalve-farming projects.

Effect of soil-bound residues of malathion on microbial activities

International Nuclear Information System (INIS)

Hussain, A.; Iqbal, Z.; Asi, M.R.; Tahira, R.; Chudhary, J.A.

2001-01-01

The effect of soil-bound residues of malathion on CO/sub 2/ evolution, dehydrogenase activity and some nitrogen transformations in a loam soil was investigated under laboratory conditions. The soil samples containing bound residues arising from 10 mg g-1 of the applied malathion were mixed in equal quantity with fresh soil and compared with solvent extracted control soil without bound residues (extracted in the same way as soil containing bound residues). Another control comprising un extracted fresh soil without bound residues was also kept to study the effect of solvent extraction on the biological activity. Rate of Carbon mineralization (CO/sub 2/ evolution) was decreased in the presence of soil-bound residues of malathion. Bound residues also affected dehydrogenase activity of soil. Over 40% inhibition of dehydrogenase activity was observed after 4 days and the inhibition persisted at least for 12 days. Nitrogen mineralization was stimulated in soil containing bound residues of malathion and this stimulatory effect increased with time of incubation. Nitrification was partially inhibited in the presence of soil-bound residues of malathion. The inhibitory effect of the soil-bound residues on nitrification did not show much variation with time. The soil-bound residues did not affect denitrification rate (N/sub 2/O evolution). Nitrogen fixation (acetylene reduction) was partially inhibited in soil amended with bound residues of malathion and the inhibitory effect persisted for at least one week. In general, soil bound residues of malathion inhibited CO/sub 2/ evolution, dehydrogenase activity, nitrification and nitrogen fixation while mineralization of nitrogen was stimulated. Denitrification was not affected by the applied insecticide. (author)

Composition of ammonia-oxidizing archaea and their contribution to nitrification in a high-temperature hot spring

Science.gov (United States)

Chen, S.; Peng, X.-T.; Xu, H.-C.; Ta, K.-W.

2015-10-01

The oxidation of ammonia by microbes and associated organisms has been shown to occur in diverse natural environments. However, the contribution of ammonia-oxidizing archaea to nitrification in high-temperature environments remains unclear. Here, we studied in situ ammonia oxidation rates and the abundance of ammonia-oxidizing archaea (AOA) in surface and bottom sediments at 77 °C in the Gongxiaoshe hot spring, Tengchong, Yunnan, China. The in situ ammonia oxidation rates measured by the 15N-NO3- pool dilution technique in the surface sinter and bottom sediments were 4.8 and 5.3 nmol N g-1 h-1, respectively. Relative abundances of Crenarchaea in both samples were determined by fluorescence in situ hybridization (FISH). Phylogenetic analysis of 16S rRNA genes showed high sequence similarity to thermophilic "Candidatus Nitrosocaldus yellowstonii", which represented the most abundant operation taxonomic units (OTU) in both sediments. Furthermore, bacterial amoA was not detected in this study. Quantitative PCR (qPCR) indicated that AOA and 16S rRNA genes were present in the range of 2.75 to 9.80 × 105 and 0.128 to 1.96 × 108 gene copies g-1 sediment. The cell-specific nitrification rates were estimated to be in the range of 0.41 to 0.79 fmol N archaeal cell-1 h-1, which is consistent with earlier estimates in estuary environments. This study demonstrated that AOA were widely involved in nitrification in this hot spring. It further indicated the importance of archaea rather than bacteria in driving the nitrogen cycle in terrestrial geothermal environments.

Soil properties associated with net nitrification following watershed conversion with Appalachian hardwoods to Norway spruce

Science.gov (United States)

Charlene N. Kelly; Stephen H. Schoenholtz; Mary Beth Adams

2011-01-01

Nitrate (NO3-N) in soil solution and streamwater can be an important vector of nitrogen (N) loss from forested watersheds, and nitrification is associated with negative consequences of soil acidification and eutrophication of aquatic ecosystems. The purpose of this study was to identify vegetation-mediated soil properties that may control...

Impact of heavy repeated long term pesticide applications on soil properties in a cotton agroecosystem

International Nuclear Information System (INIS)

Hussain, Altaf; Asi, Muhammad Rafique; Iqbal, Zafar; Chaudhry, Jamil Anwar

2001-01-01

A study was conducted under field conditions to investigate the effects of heavy repeated long term pesticide applications, at their recommended doses, on some biological properties in relation to the cotton agroecosystem at NIAB, Faisalabad, Pakistan. Control, test and treated soils before (BPA) and after pesticide applications (APA) were collected and analyzed at different stages of pesticide applications. The selective tests were measurements of microbial numbers, basal as well as substrate-induced respiration, nitrification, Fe-III reduction and the activities, of dehydrogenase and arginine deaminase. Endosulfan, profenophos + alphamethrin and methamidophos inhibited while monocrotophos and bifenthrin + acetamiprid enhanced the bacterial population numbers. The fungal population was depressed with endosulfan while monocrotophos, profenophos and methamidophos stimulated it. All other applied pesticides did not cause any appreciable change in total bacterial and fungal populations throughout the study period. Monocrotophos, propargite, endosulfan alone or with dimethoate and profenophos with cypermethrin or with ethion inhibited the respiration and hence affected the biomass. All other pesticides had no effect in test and treated soils compared to control soil. No pronounced inhibition or stimulation was seen in respiration after several weeks following the applications of pesticide. Endosulfan, endosulfan with dimethoate, methamidophos stimulated while profenophos + cypermethrin and bifenthrin + endosulfan inhibited the nitrification. All other pesticide applications showed similar nitrification rates in test and treated soils compared to control soil. Iron reduction capacity was stimulated by dimethoate + endosulfan and propenophos + cypermethrin and profenphos, methamidophos, propargite and diafenthiuron + profenophos reduced it. Soil dehydrogenase activity was inhibited by methamidophos, fenpropathrin, endosulfan + dimethoate and bifenthrin + ethion

Empirical evidence reveals seasonally dependent reduction in nitrification in coastal sediments subjected to near future ocean acidification

NARCIS (Netherlands)

Braeckman, U.; Van Colen, C.; Guilini, K.; Van Gansbeke, D.; Soetaert, K.; Vincx, M.; Vanaverbeke, J.

2014-01-01

Research so far has provided little evidence that benthic biogeochemical cycling is affected by ocean acidification under realistic climate change scenarios. We measured nutrient exchange and sediment community oxygen consumption (SCOC) rates to estimate nitrification in natural coastal permeable

Characterization of a halophilic heterotrophic nitrification-aerobic denitrification bacterium and its application on treatment of saline wastewater.

Science.gov (United States)

Duan, Jinming; Fang, Hongda; Su, Bing; Chen, Jinfang; Lin, Jinmei

2015-03-01

A novel halophilic bacterium capable of heterotrophic nitrification-aerobic denitrification was isolated from marine sediments and identified as Vibrio diabolicus SF16. It had ability to remove 91.82% of NH4(+)-N (119.77 mg/L) and 99.71% of NO3(-)-N (136.43 mg/L). The nitrogen balance showed that 35.83% of initial NH4(+)-N (119.77 mg/L) was changed to intracellular nitrogen, and 53.98% of the initial NH4(+)-N was converted to gaseous denitrification products. The existence of napA gene further proved the aerobic denitrification ability of strain SF16. The optimum culture conditions were salinity 1-5%, sodium acetate as carbon source, C/N 10, and pH 7.5-9.5. When an aerated biological filter system inoculated with strain SF16 was employed to treat saline wastewater, the average removal efficiency of NH4(+)-N and TN reached 97.14% and 73.92%, respectively, indicating great potential of strain SF16 for future full-scale applications. Copyright © 2014 Elsevier Ltd. All rights reserved.

Culture-independent detection of 'TM7' bacteria in a streptomycin-resistant acidophilic nitrifying process

International Nuclear Information System (INIS)

Kurogi, T.; Linh, N. T. T.; Kuroki, T.; Yamada, T.; Hiraishi, A.

2014-01-01

Nitrification in biological wastewater treatment processes has been believed for long time to take place under neutral conditions and is inhibited under acidic conditions. However, we previously constructed acidophilic nitrifying sequencing-batch reactors (ANSBRs) being capable of nitrification at −1 was added. In all reactors, the pH varied between 2.7 and 4.0, and ammonium was completely converted to nitrate in every batch cycle. PCR-aided denaturing gradient gel electrophoresis (DGGE) targeting 16S rRNA genes revealed that some major clones assigned to TM7 bacteria and Gammaproteobacteria were constantly present during the overall period of operation. Fluorescence in situ hybridization (FISH) with specific oligonucleotide probes also showed that TM7 bacteria predominated in all SRAN reactors, accounting for 58% of the total bacterial population on average. Although the biological significance of the TM7 bacteria in the SRAN reactors are unknown, our results suggest that these bacteria are possibly streptomycin-resistant and play some important roles in the acidophilic nitrifying process

The rate of aucubin, a secondary metabolite in Plantago lanceolata and potential nitrification inhibitor, needed to reduce ruminant urine patch nitrous oxide emissions

Science.gov (United States)

Gardiner, C. A.; Clough, T.; Cameron, K.; Di, H.; Edwards, G. R.

2017-12-01

Nitrous oxide (N2O) losses derived from grazing ruminant livestock urine patches account for 40% of global N2O emissions. It has been shown that Plantago lanceolata, an herb species used in grazed pastures, contains an active secondary metabolite (aucubin) that has the potential to be excreted by grazing ruminants and inhibit nitrification in the urine patch, a key step in soil N2O production. However, the urinary excretion rate of aucubin needed to significantly reduce urine patch N2O emissions remains unknown. Aucubin was dissolved in bovine urine at three rates (47, 243, and 486 kg ha-1), based on rates used in Dietz et al. (2013) and the calculated highest potential aucubin application rate, from Gardiner et al. (2017). A control, along with a urine treatment and the three aucubin treatments (all urine applied at 700 kg N ha-1), was applied to 20 g soil and incubated in the laboratory for 35 d. Soils were monitored for surface pH, inorganic N concentration (NH4+/NO3-), and gas (N2O and CO2) fluxes. This experiment is currently underway and the results will be presented at the conference. Dietz M, Machill S, Hoffmann H, Schmidtke K 2013. Inhibitory effects of Plantago lanceolata L. on soil N mineralization. Plant and Soil 368: 445-458. Gardiner CA, Clough TJ, Cameron KC, Di HJ, Edwards GR, de Klein CAM 2017. The potential inhibitory effects of Plantago lanceolata and its active secondary metabolite aucubin on soil nitrification and nitrous oxide emissions under ruminant urine patch conditions. Manuscript submitted for publication.

Simultaneous nitrification-denitrification and phosphorus removal in a fixed bed sequencing batch reactor (FBSBR)

International Nuclear Information System (INIS)

Rahimi, Yousef; Torabian, Ali; Mehrdadi, Naser; Shahmoradi, Behzad

2011-01-01

Research highlights: → Sludge production in FSBR reactor is 20-30% less than SBR reactor. → FSBR reactor showed more nutrient removal rate than SBR reactor. → FSBR reactor showed less VSS/TSS ratio than SBR reactor. - Abstract: Biological nutrient removal (BNR) was investigated in a fixed bed sequencing batch reactor (FBSBR) in which instead of activated sludge polypropylene carriers were used. The FBSBR performance on carbon and nitrogen removal at different loading rates was significant. COD, TN, and phosphorus removal efficiencies were at range of 90-96%, 60-88%, and 76-90% respectively while these values at SBR reactor were 85-95%, 38-60%, and 20-79% respectively. These results show that the simultaneous nitrification-denitrification (SND) is significantly higher than conventional SBR reactor. The higher total phosphorus (TP) removal in FBSBR correlates with oxygen gradient in biofilm layer. The influence of fixed media on biomass production yield was assessed by monitoring the MLSS concentrations versus COD removal for both reactors and results revealed that the sludge production yield (Y obs ) is significantly less in FBSBR reactors compared with SBR reactor. The FBSBR was more efficient in SND and phosphorus removal. Moreover, it produced less excess sludge but higher in nutrient content and stabilization ratio (less VSS/TSS ratio).

Simultaneous nitrification-denitrification and phosphorus removal in a fixed bed sequencing batch reactor (FBSBR)

Energy Technology Data Exchange (ETDEWEB)

Rahimi, Yousef, E-mail: you.rahimi@gmail.com [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran, No. 25 Qods St., Enghelab Ave, Tehran (Iran, Islamic Republic of); Torabian, Ali, E-mail: atorabi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran, No. 25 Qods St., Enghelab Ave, Tehran (Iran, Islamic Republic of); Mehrdadi, Naser, E-mail: mehrdadi@ut.ac.ir [Department of Civil and Environmental Engineering, Graduate Faculty of Environment, University of Tehran, No. 25 Qods St., Enghelab Ave, Tehran (Iran, Islamic Republic of); Shahmoradi, Behzad, E-mail: bshahmorady@gmail.com [Department of Environmental Science, University of Mysore, MGM-06 Mysore (India)

2011-01-30

Research highlights: {yields} Sludge production in FSBR reactor is 20-30% less than SBR reactor. {yields} FSBR reactor showed more nutrient removal rate than SBR reactor. {yields} FSBR reactor showed less VSS/TSS ratio than SBR reactor. - Abstract: Biological nutrient removal (BNR) was investigated in a fixed bed sequencing batch reactor (FBSBR) in which instead of activated sludge polypropylene carriers were used. The FBSBR performance on carbon and nitrogen removal at different loading rates was significant. COD, TN, and phosphorus removal efficiencies were at range of 90-96%, 60-88%, and 76-90% respectively while these values at SBR reactor were 85-95%, 38-60%, and 20-79% respectively. These results show that the simultaneous nitrification-denitrification (SND) is significantly higher than conventional SBR reactor. The higher total phosphorus (TP) removal in FBSBR correlates with oxygen gradient in biofilm layer. The influence of fixed media on biomass production yield was assessed by monitoring the MLSS concentrations versus COD removal for both reactors and results revealed that the sludge production yield (Y{sub obs}) is significantly less in FBSBR reactors compared with SBR reactor. The FBSBR was more efficient in SND and phosphorus removal. Moreover, it produced less excess sludge but higher in nutrient content and stabilization ratio (less VSS/TSS ratio).

Microbial nitrification in throughfall of a Japanese cedar associated with archaea from the tree canopy.

Science.gov (United States)

Watanabe, Keiji; Kohzu, Ayato; Suda, Wataru; Yamamura, Shigeki; Takamatsu, Takejiro; Takenaka, Akio; Koshikawa, Masami Kanao; Hayashi, Seiji; Watanabe, Mirai

2016-01-01

To investigate the nitrification potential of phyllospheric microbes, we incubated throughfall samples collected under the canopies of Japanese cedar (Cryptomeria japonica) and analyzed the transformation of inorganic nitrogen in the samples. Nitrate concentration increased in the unfiltered throughfall after 4 weeks of incubation, but remained nearly constant in the filtered samples (pore size: 0.2 and 0.4 µm). In the unfiltered samples, δ(18)O and δ(15)N values of nitrate decreased during incubation. In addition, archaeal ammonia monooxygenase subunit A (amoA) genes, which participate in the oxidation of ammonia, were found in the throughfall samples, although betaproteobacterial amoA genes were not detected. The amoA genes recovered from the leaf surface of C. japonica were also from archaea. Conversely, nitrate production, decreased isotope ratios of nitrate, and the presence of amoA genes was not observed in rainfall samples collected from an open area. Thus, the microbial nitrification that occurred in the incubated throughfall is likely due to ammonia-oxidizing archaea that were washed off the tree canopy by precipitation.

Mercury Inhibits Soil Enzyme Activity in a Lower Concentration than the Guideline Value.

Science.gov (United States)

Mahbub, Khandaker Rayhan; Krishnan, Kannan; Megharaj, Mallavarapu; Naidu, Ravi

2016-01-01

Three soil types - neutral, alkaline and acidic were experimentally contaminated with nine different concentrations of inorganic mercury (0, 5, 10, 50, 100, 150, 200, 250, 300 mg/kg) to derive effective concentrations of mercury that exert toxicity on soil quality. Bioavailability of mercury in terms of water solubility was lower in acidic soil with higher organic carbon. Dehydrogenase enzyme activity and nitrification rate were chosen as indicators to assess soil quality. Inorganic mercury significantly inhibited (p mercury contents (EC10) were found to be less than the available safe limits for inorganic mercury which demonstrated inadequacy of existing guideline values.

Inhibition of biological activity of staphylococcal enterotoxin A (SEA) by apple juice and apple polyphenols.

Science.gov (United States)

Rasooly, Reuven; Do, Paula M; Friedman, Mendel

2010-05-12

The foodborne pathogen Staphylococcus aureus produces the virulent staphylococcal enterotoxin A (SEA), a single-chain protein that consists of 233 amino acid residues with a molecular weight of 27 078 Da. SEA is a superantigen that is reported to contribute to animal (mastitis) and human (emesis, diarrhea, atopic dermatitis, arthritis, and toxic shock) syndromes. Changes of the native structural integrity may inactivate the toxin by preventing molecular interaction with cell membrane receptor sites of their host cells. In the present study, we evaluated the ability of one commercial and two freshly prepared apple juices and a commercial apple polyphenol preparation (Apple Poly) to inhibit the biological activity of SEA. Dilutions of freshly prepared apple juices and Apple Poly inhibited the biological activity of SEA without any significant cytotoxic effect on the spleen cells. Additional studies with antibody-coated immunomagnetic beads bearing specific antibodies against the toxin revealed that SEA added to apple juice appears to be largely irreversibly bound to the juice constituents. The results suggest that food-compatible and safe anti-toxin phenolic compounds can be used to inactivate SEA in vitro and possibly also in vivo, even after induction of T-cell proliferation by long-term exposure to SEA. The significance of the results for microbial food safety and human health is discussed.

Meta-analysis of the effect of urease and nitrification inhibitors on crop productivity and nitrogen use efficience

NARCIS (Netherlands)

Abalos, D.; Jeffery, S.L.; Sanz-Cobena, A.; Guardia, G.; Vallejo, A.

2014-01-01

Nitrification and urease inhibitors are proposed as means to reduce nitrogen losses, thereby increasing crop nitrogen use efficiency (NUE). However, their effect on crop yield is variable. A meta-analysis was conducted to evaluate their effectiveness at increasing NUE and crop productivity. Commonly

Biological phosphorus and nitrogen removal in sequencing batch reactors: effects of cycle length, dissolved oxygen concentration and influent particulate matter.

Science.gov (United States)

Ginige, Maneesha P; Kayaalp, Ahmet S; Cheng, Ka Yu; Wylie, Jason; Kaksonen, Anna H

2013-01-01

Removal of phosphorus (P) and nitrogen (N) from municipal wastewaters is required to mitigate eutrophication of receiving water bodies. While most treatment plants achieve good N removal using influent carbon (C), the use of influent C to facilitate enhanced biological phosphorus removal (EBPR) is poorly explored. A number of operational parameters can facilitate optimum use of influent C and this study investigated the effects of cycle length, dissolved oxygen (DO) concentration during aerobic period and influent solids on biological P and N removal in sequencing batch reactors (SRBs) using municipal wastewaters. Increasing cycle length from 3 to 6 h increased P removal efficiency, which was attributed to larger portion of N being removed via nitrite pathway and more biodegradable organic C becoming available for EBPR. Further increasing cycle length from 6 to 8 h decreased P removal efficiencies as the demand for biodegradable organic C for denitrification increased as a result of complete nitrification. Decreasing DO concentration in the aerobic period from 2 to 0.8 mg L(-1) increased P removal efficiency but decreased nitrification rates possibly due to oxygen limitation. Further, sedimented wastewater was proved to be a better influent stream than non-sedimented wastewater possibility due to the detrimental effect of particulate matter on biological nutrient removal.

Long-term dynamic and pseudo-state modeling of complete partial nitrification process at high nitrogen loading rates in a sequential batch reactor (SBR).

Science.gov (United States)

Soliman, Moomen; Eldyasti, Ahmed

2017-06-01

Recently, partial nitrification has been adopted widely either for the nitrite shunt process or intermediate nitrite generation step for the Anammox process. However, partial nitrification has been hindered by the complexity of maintaining stable nitrite accumulation at high nitrogen loading rates (NLR) which affect the feasibility of the process for high nitrogen content wastewater. Thus, the operational data of a lab scale SBR performing complete partial nitrification as a first step of nitrite shunt process at NLRs of 0.3-1.2kg/(m 3 d) have been used to calibrate and validate a process model developed using BioWin® in order to describe the long-term dynamic behavior of the SBR. Moreover, an identifiability analysis step has been introduced to the calibration protocol to eliminate the needs of the respirometric analysis for SBR models. The calibrated model was able to predict accurately the daily effluent ammonia, nitrate, nitrite, alkalinity concentrations and pH during all different operational conditions. Copyright © 2017 Elsevier Ltd. All rights reserved.

Fate of nanosilver in wastewater treatment plants and their impact on nitrification activity in sewage sludge; Verhalten von Nanosilber in Klaeranlagen und dessen Einfluss auf die Nitrifikationsleistung in Belebtschlamm

Energy Technology Data Exchange (ETDEWEB)

Burkhardt, Michael [Eawag: Das Wasserforschungs-Institut des ETH-Bereichs, Duebendorf (Switzerland); HSR Hochschule fuer Technik, Rapperswil (CH). Inst. fuer Umwelt- und Verfahrenstechnik (UMTEC); Zuleeg, Steffen [Eawag: Das Wasserforschungs-Institut des ETH-Bereichs, Duebendorf (Switzerland); KUSTER + HAGER Ingenieurbuero AG, St. Gallen (Switzerland); Kaegi, Ralf; Sinnet, Brian; Eugster, Jakob; Boller, Markus; Siegrist, Hansruedi [Eawag: Das Wasserforschungs-Institut des ETH-Bereichs, Duebendorf (Switzerland)

2010-10-15

%). The mass fluxes are similar to metallic colloidal nanosilver investigated under the same conditions. The mass balance has been consistently confirmed by the full-scale study in a municipal wastewater treatment plant. The silver fluxes correspond to the fluxes of the suspended solids in sludge and effluent. Overall, it is estimated that from public wastewater treatment plants about 4-40 mg/a Ag per inhabitant equivalent are discharged annually to the receiving water. The analysis by SEM-EDX demonstrates adsorption and incorporation of nanosilver on biological flocs. This method yields first insight into complex building and transformation of silver associated with sulfide after adding metallic nanosilver and silver chloride to wastewater. Silver ions released from nanosilver react immediately with large amounts of chloride present in wastewater to form silver chloride. Silver ions may react with organic ligands or sulfide groups additionally. Consequently, even silver nitrate added with 1 mg/L Ag (250 mg Ag/kg TS) to activated sludge did not inhibit nitrification activity. Very high amounts of nanosilver, i. e. 100 mg/L Ag, overburdened the system and equilibrium condition between silver ion release and ligands was not reached. The mass balance reflects the excellent attachment of nanosilver to activated sludge and biological flocs. Therefore, the main elimination process of nanosilver is attachment to the activated sludge. The elimination of nanosilver is high compared to organic and inorganic micro pollutants omnipresent in wastewater. Any further reduction of suspended solids in the effluent water will reduce the silver load. Generally, in wastewater nanosilver occurs bonded to activated sludge flocs and therefore the elimination of nanosilver is efficient under operation conditions typical for wastewater treatment plants. The major fraction of nanosilver is removed from the system by the excess sludge withdrawal. Nonetheless, the efficiency may be further improved

Antisense oligodeoxynucleotide inhibition as a potent diagnostic tool for gene function in plant biology

Energy Technology Data Exchange (ETDEWEB)

Jansson, Christer; Sun, Chuanxin; Ghebramedhin, Haile; Hoglund, Anna-Stina; Jansson, Christer

2008-01-15

Antisense oligodeoxynucleotide (ODN) inhibition emerges as an effective means for probing gene function in plant cells. Employing this method we have established the importance of the SUSIBA2 transcription factor for regulation of starch synthesis in barley endosperm, and arrived at a model for the role of the SUSIBAs in sugar signaling and source-sink commutation during cereal endosperm development. In this addendum we provide additional data demonstrating the suitability of the antisense ODN technology in studies on starch branching enzyme activities in barley leaves. We also comment on the mechanism for ODN uptake in plant cells. Antisense ODNs are short (12-25 nt-long) stretches of single-stranded ODNs that hybridize to the cognate mRNA in a sequence-specific manner, thereby inhibiting gene expression. They are naturally occurring in both prokaryotes and eukaryotes where they partake in gene regulation and defense against viral infection. The mechanisms for antisense ODN inhibition are not fully understood but it is generally considered that the ODN either sterically interferes with translation or promotes transcript degradation by RNase H activation. The earliest indication of the usefulness of antisense ODN technology for the purposes of molecular biology and medical therapy was the demonstration in 1978 that synthetic ODNs complementary to Raos sarcoma virus could inhibit virus replication in tissue cultures of chick embryo fibroblasts. Since then the antisense ODN technology has been widely used in animal sciences and as an important emerging therapeutic approach in clinical medicine. However, antisense ODN inhibition has been an under-exploited strategy for plant tissues, although the prospects for plant cells in suspension cultures to take up single-stranded ODNs was reported over a decade ago. In 2001, two reports from Malho and coworker demonstrated the use of cationic-complexed antisense ODNs to suppress expression of genes encoding pollen

Continuous ammonium enrichment of a woodland stream: uptake kinetics, leaf decomposition, and nitrification

Energy Technology Data Exchange (ETDEWEB)

Newbold, J D; Elwood, J W; Schulze, M S; Stark, R W; Barmeier, J C

1983-01-01

In order to test for nitrogen limitation and examine ammonium uptake by stream sediments, ammonium hydroxide was added continuously at concentrations averaging 100 /sup +/gl/sup -1/ for 70 days to a second-order reach of Walker Branch, an undisturbed woodland stream in Tennessee. Ammonium uptake during the first 4 h of addition corresponded to adsorption kinetics rather than to first-order uptake or to Michaelis-Menten kinetics. However, the calculated adsorption partition coefficient was two to four orders of magnitude greater than values reported for physical adsorption of ammonium, suggesting that the uptake was largely biotic. Mass balance indicated that the uptake of ammonium from the water could be accounted for by increased nitrogen content in benthic organic detritus. Nitrification, inferred from longitudinal gradients in NO/sub 3/, began soon after enrichment and increased dramatically near the end of the experiment. Both ammonium and nitrate concentrations dropped quickly to near background levels when input ceased, indicating little desorption or nitrification of excess nitrogen stored in the reach. There was no evidence of nitrogen limitation as measured by weight loss, oxygen consumption, phosphorus content, and macroinvertebrate density of red oak leaf packs, or by chlorophyll content and aufwuchs biomass on plexiglass slides. A continuous phosphorus enrichment 1 year earlier had demonstrated phosphorus limitation in Walker Branch. 38 references, 6 figures, 3 tables.

Controlled Carbon Source Addition to an Alternating Nitrification-Denitrification Wastewater Treatment Process Including Biological P Removal

DEFF Research Database (Denmark)

Isaacs, Steven Howard; Henze, Mogens

1995-01-01

The paper investigates the effect of adding an external carbon source on the rate of denitrification in an alternating activated sludge process including biological P removal. Two carbon sources were examined, acetate and hydrolysate derived from biologically hydrolyzed sludge. Preliminary batch ...

Instability of biological nitrogen removal in a cokes wastewater treatment facility during summer

International Nuclear Information System (INIS)

Kim, Young Mo; Park, Donghee; Lee, Dae Sung; Park, Jong Moon

2007-01-01

Failure in nitrogen removal of cokes wastewater occurs occasionally during summer season (38 deg. C) due to the instability of nitrification process. The objective of this study was to examine why the nitrification process is unstable especially in summer. Various parameters such as pH, temperature, nutrients and pollutants were examined in batch experiments using activated sludge and wastewater obtained from a full-scale cokes wastewater treatment facility. Batch experiments showed that nitrification rate of the activated sludge was faster in summer (38 deg. C) than in spring or autumn (29 deg. C) and the toxic effects of cyanide, phenol and thiocyanate on nitrification were reduced with increasing temperature. Meanwhile, experiment using continuous reactor showed that the reduction rate in nitrification efficiency was higher at 38 deg. C than at 29 deg. C. In conclusion, the instability of full-scale nitrification process in summer might be mainly due to washing out of nitrifiers by fast growth of competitive microorganisms at higher temperature under increased concentrations of phenol and thiocyanate

Current as an indicator of ammonia concentration during wastewater treatment in an integrated microbial electrolysis cell - Nitrification system

DEFF Research Database (Denmark)

Zhao, Nannan; Angelidaki, Irini; Zhang, Yifeng

2018-01-01

with synthetic ammonia-rich wastewater. A good linear relationship (R2 = 0.9419) was observed between current (0.5130–3.906 mA) and ammonia levels (0–62.1 mg NH4+-N/L). Such linear relationship was always obtained regardless of the tested external power supply or wastewater pH. The external electrochemical cell......A key challenge for ammonia monitoring during nitrogen removal process is the extra cost and toxic reagent consuming. Herein the feasibility of current generated by an integrated microbial electrolysis cell (MEC) - nitrification reactor as an indicator of initial ammonia levels (NH3/NH4......+) in wastewater was explored. In this loop system, ammonia was first oxidized to nitrate in the nitrification reactor, and then the effluent was introduced into the cathode of MEC where nitrate was reduced as electron acceptor. The correlation between current and ammonia concentration was first investigated...

A systems biology framework for modeling metabolic enzyme inhibition of Mycobacterium tuberculosis

Directory of Open Access Journals (Sweden)

Reifman Jaques

2009-09-01

Full Text Available Abstract Background Because metabolism is fundamental in sustaining microbial life, drugs that target pathogen-specific metabolic enzymes and pathways can be very effective. In particular, the metabolic challenges faced by intracellular pathogens, such as Mycobacterium tuberculosis, residing in the infected host provide novel opportunities for therapeutic intervention. Results We developed a mathematical framework to simulate the effects on the growth of a pathogen when enzymes in its metabolic pathways are inhibited. Combining detailed models of enzyme kinetics, a complete metabolic network description as modeled by flux balance analysis, and a dynamic cell population growth model, we quantitatively modeled and predicted the dose-response of the 3-nitropropionate inhibitor on the growth of M. tuberculosis in a medium whose carbon source was restricted to fatty acids, and that of the 5'-O-(N-salicylsulfamoyl adenosine inhibitor in a medium with low-iron concentration. Conclusion The predicted results quantitatively reproduced the experimentally measured dose-response curves, ranging over three orders of magnitude in inhibitor concentration. Thus, by allowing for detailed specifications of the underlying enzymatic kinetics, metabolic reactions/constraints, and growth media, our model captured the essential chemical and biological factors that determine the effects of drug inhibition on in vitro growth of M. tuberculosis cells.

Toxicity of fluoride to microorganisms in biological wastewater treatment systems.

Science.gov (United States)

Ochoa-Herrera, Valeria; Banihani, Qais; León, Glendy; Khatri, Chandra; Field, James A; Sierra-Alvarez, Reyes

2009-07-01

Fluoride is a common contaminant in a variety of industrial wastewaters. Available information on the potential toxicity of fluoride to microorganisms implicated in biological wastewater treatment is very limited. The objective of this study was to evaluate the inhibitory effect of fluoride towards the main microbial populations responsible for the removal of organic constituents and nutrients in wastewater treatment processes. The results of short-term batch bioassays indicated that the toxicity of sodium fluoride varied widely depending on the microbial population. Anaerobic microorganisms involved in various metabolic steps of anaerobic digestion processes were found to be very sensitive to the presence of fluoride. The concentrations of fluoride causing 50% metabolic inhibition (IC(50)) of propionate- and butyrate-degrading microorganisms as well as mesophilic and thermophilic acetate-utilizing methanogens ranged from 18 to 43 mg/L. Fluoride was also inhibitory to nitrification, albeit at relatively high levels (IC(50)=149 mg/L). Nitrifying bacteria appeared to adapt rapidly to fluoride, and a near complete recovery of their metabolic activity was observed after only 4d of exposure to high fluoride levels (up to 500 mg/L). All other microbial populations evaluated in this study, i.e., glucose fermenters, aerobic glucose-degrading heterotrophs, denitrifying bacteria, and H(2)-utilizing methanogens, tolerated fluoride at very high concentrations (>500 mg/L).

Impact of long term applications of cotton pesticides on soil biological properties, dissipation of [14C]-methyl parathion and persistence of multi-pesticide residues

International Nuclear Information System (INIS)

Andrea, M.M.; Peres, T.B.; Luchini, L.C.; Marcondes, M.A.; Pettinelli, A. Jr.; Nakagawa, L.E.

2001-01-01

Biological parameters were followed in soils from a cotton farm (Tatui) where the recommended pesticides have been used for years, and from an experimental field (Sao Paulo) which was subdivided in two areas: one received the recommended pesticides and the other was maintained untreated. The soil bioactivities monitored from 1995 to 1998, after different pesticide applications, were: basal and glucose-induced respiration; anaerobic activity; nitrification rate; activity of the enzymes: dehydrogenase, aryl sulfatase and arginine deaminase; the soil capacity to mineralize an aromatic pesticide molecule ([ 14 C]-2,4-D), fungal and bacterial contributions for soil respiration until the beginning of 1998, and fungal and bacterial numbers from the beginning of 1998. The dissipation of [ 14 C]-methyl parathion - one of the recommended pesticides - was followed by radiometric techniques only in Sao Paulo, but persistence of multi-residues was determined in both soils by gas-liquid chromatography. All the biological parameters varied each sampling time and values also varied among soil samples, being inhibited or stimulated by the different pesticide applications, but they mostly recovered the initially detected activity. Dissipation of methyl parathion was fast and not affected by the other pesticide applications. Pesticide residues varied between the two soils but were mostly low after all applications, which indicates their dissipation. (author)

Respirometry applied for biological nitrogen removal process; Aplicacion de la respirometria al tratamiento biologico para la eliminacion del nitrogeno

Energy Technology Data Exchange (ETDEWEB)

Serrano, E.

2004-07-01

In waste water treatment plants, the Biological Nitrogen Removal (BNR) has acquired a fundamental importance. The BNR processes are Nitrification ( aerobic) and Denitrification (anoxic). Since both processes are carried on living microorganisms, a lack of their bioactivity information might cause serious confusion about their control criteria and following up purposes. For this reason, the Re spirometry applied to those processes has reached an important role by getting an essential information in a timely manner through respiration rate measurements in static and dynamic modes and applications such as AUR (Ammonium Uptake Rate), Nitrification Capacity. RBCOD (Readily Biodegradable COD) as well as AUR related to SRT (Sludge age), RBCOD related to NUR (Specific Nitrate Uptake Rate) and others. By other side in this article we have introduced a not very well known applications related to denitrification, about the methanol acclimatization and generated bioactivity. (Author) 6 refs.

USBF-system of biological wastewater treatment; Elsistema USBF en la depuracion biologica de aguas residuales

Energy Technology Data Exchange (ETDEWEB)

Ampudia Gutierrez, J.

2003-07-01

An advanced system of biological wastewater treatment, has been developed by the company Depuralia. This system brings up a technological innovation, which has been awarded with several international awards. The wastewater treatment, occurs in an activated sludge reactor of extended aeration with a very low mass loading, with a nitrification-denitrification process, and water separation-clarification by upflow sludge blanket-filtration. The arrangement of a compact biological reactor enables complex wastewater treatment. High efficiency of the separation through sludge filtration provides functionality of the equipment with high concentration of activated sludge, with less implementation surface and volume. The elements of the biological reactor are described, the advantages are enumerated, and the results obtained in several accomplishments are shown; in the industrial as well as in the urban water treatment plants. (Author) 9 refs.

Fact and Fiction of Nitrous Oxide Production By Nitrification

Science.gov (United States)

Stein, L. Y.; Kozlowski, J.; Stieglmeier, M.; Klotz, M. G.; Schleper, C.

2014-12-01

An accepted dogma in nitrification research is that ammonia-oxidizing bacteria (AOB) produce a modicum of nitrous oxide (N2O) during nitritation via incomplete oxidation of hydroxylamine, and substantially more at low oxygen concentrations via nitrifier denitrification.The nitrifier denitrification pathway involves the reduction of nitrite to N2O via nitric oxide and was thought to require activities of a copper-containing nitrite reductase (NirK) and nitric oxide reductase (NorB); inventory encoded in most, but not all AOB genome sequences. The discovery of nirK genes in ammonia-oxidizing Thaumarchaeota (AOA) resulted in a slew of publications stating that AOA must also perform nitrifier denitrification and, due to their high abundance, must control the majority of nitrification-linked N2O emissions. Prior to a publication by Stieglmeier et al. (2014), which definitively showed a lack of nitrifier denitrification by two axenic AOA cultures, other researchers relied on enrichment cultures, negative data, and heavy inferencing without direct demonstration of either a functional pathway or involvement of specific genes or enzymes. AOA genomes lack recognizable nitric oxide reductases and thermophilic AOA also lack nirK genes. Physiological and microrespirometry experiments with axenic AOB and AOA cultures allowed us to demonstrate that: 1) AOB produce N2O via nitrifier denitrification even though some lack annotated nirK and/or norB genes; 2) nitrifier denitrification by AOB is reliant on nitric oxide but ammonia oxidation is not; 3) ammonia oxidation by AOA is reliant on production of nitric oxide; 4) AOA are incapable of generating N2O via nitrifier denitrification; 5) N2O production by AOA is from chemical interactions between NO and media components, most likely not by enzyme activity. Our results reveal operation of different N oxide transformation pathways in AOB and AOA governed by different environmental controls and involving different mechanisms of N2O

Relative nitrogen mineralization and nitrification potentials in relation to soil chemistry in oak forest soils along a historical deposition gradient

Science.gov (United States)

Ralph E. J. Boerner; Elaine Kennedy Sutherland

1996-01-01

This study quantified soil nutrient status and N mineralization/nitrification potentials in soils of oak-dominated, unmanaged forest stands in seven USDA Forest Service experimental forests (EF) ranging along a historical and current acidic deposition gradient from southern Illinois to central West Virginia.

Nitrification in moving bed and fixed bed biofilters treating effluent water from a large commercial outdoor rainbow trout RAS

DEFF Research Database (Denmark)

Suhr, Karin; Pedersen, Per Bovbjerg

2010-01-01

The nitrification performance of two fixed bed (FB) biofilters and two moving bed (MB) biofilters was evaluated. They received the same cold (8 degrees C) influent water from a commercial outdoor RAS facility producing rainbow trout (average density 32 kg m(-3)). The filters were constructed as f...

Using the Triple Labelling Technique to apportion N2O Emissions to Nitrification and Denitrification from different Nitrogen Sources at different Water-Filled-Pore-Spaces

Science.gov (United States)

Loick, Nadine; Dixon, Elizabeth R.; Repullo Ruibérriz de Torres, Miguel A.; Ciganda, Veronica; Lopez-Aizpun, Maria A.; Matthews, G. Peter; Müller, Christoph; Cardenas, Laura M.

2017-04-01

Nitrous oxide (N2O) is considered to be an important greenhouse gas (GHG) accounting for approximately 6% of the current global warming. The atmospheric N2O concentration has been increasing since the Industrial Revolution, with soils representing its major source, making the understanding of its sources and removal processes very important for the development of mitigation strategies. In soils N gases are mainly produced via nitrification and denitrification. It is assumed that under dry/aerobic conditions nitrification is the dominant N consuming process, while denitrification becomes dominant under wetter conditions promoting anaerobicity. Nitrification and denitrification may occur simultaneously in different microsites of the same soil but there is often uncertainty associated with which process dominates in a particular soil under specific conditions. N2O predominantly derives from incomplete denitrification of nitrate (NO3-). The existence of different pools of NO3- in soils, namely the native soil pool, and the fertiliser-added one, has been suggested through a series of laboratory incubation experiments (Meijide et al., 2010; Bergstermann et al., 2011) using the denitrification incubation system, DENIS (Cardenas et al., 2003), in which soil cores are incubated under an N-free atmosphere, allowing direct measurements of all emitted N gases (NO, N2O and N2) as well as CO2. A third pool, NO3- produced from nitrification of applied NH4+, can also be a source of N2O via denitrification and also from nitrification. In this study labelling of substrate-N with 15N is used to quantify the underlying gross N transformation rates and link them to N-emissions to identify the production and consumption pathways and temporal dynamics of N2O. In three experiments twelve soil cores each were incubated in the DENIS to measure gaseous emissions, while parallel incubations under the same conditions were set up for destructive soil sampling at 7 time points. Using the triple

Phosphate limitation in biological rapid sand filters used to remove ammonium from drinking water

DEFF Research Database (Denmark)

Lee, Carson Odell; Albrechtsen, Hans-Jørgen; Smets, Barth F.

2013-01-01

Removing ammonium from drinking water is important for maintaining biological stability in distribution systems. This is especially important in regions that do not use disinfectants in the treatment process or keep a disinfectant residual in the distribution system. Problems with nitrification c...... a pilot scale sand column which initial analysis confirmed performed similarly to the full scale filters. Long term increased ammonium loads were applied to the pilot filter both with and without phosphate addition. Phosphate was added at a concentration of 0.5 mg PO4-P/L to ensure...

Differential contributions of ammonia oxidizers and nitrite oxidizers to nitrification in four paddy soils

Science.gov (United States)

Wang, Baozhan; Zhao, Jun; Guo, Zhiying; Ma, Jing; Xu, Hua; Jia, Zhongjun

2015-01-01

Rice paddy fields are characterized by regular flooding and nitrogen fertilization, but the functional importance of aerobic ammonia oxidizers and nitrite oxidizers under unique agricultural management is poorly understood. In this study, we report the differential contributions of ammonia-oxidizing archaea (AOA), bacteria (AOB) and nitrite-oxidizing bacteria (NOB) to nitrification in four paddy soils from different geographic regions (Zi-Yang (ZY), Jiang-Du (JD), Lei-Zhou (LZ) and Jia-Xing (JX)) that are representative of the rice ecosystems in China. In urea-amended microcosms, nitrification activity varied greatly with 11.9, 9.46, 3.03 and 1.43 μg NO3−-N g−1 dry weight of soil per day in the ZY, JD, LZ and JX soils, respectively, over the course of a 56-day incubation period. Real-time quantitative PCR of amoA genes and pyrosequencing of 16S rRNA genes revealed significant increases in the AOA population to various extents, suggesting that their relative contributions to ammonia oxidation activity decreased from ZY to JD to LZ. The opposite trend was observed for AOB, and the JX soil stimulated only the AOB populations. DNA-based stable-isotope probing further demonstrated that active AOA numerically outcompeted their bacterial counterparts by 37.0-, 10.5- and 1.91-fold in 13C-DNA from ZY, JD and LZ soils, respectively, whereas AOB, but not AOA, were labeled in the JX soil during active nitrification. NOB were labeled to a much greater extent than AOA and AOB, and the addition of acetylene completely abolished the assimilation of 13CO2 by nitrifying populations. Phylogenetic analysis suggested that archaeal ammonia oxidation was predominantly catalyzed by soil fosmid 29i4-related AOA within the soil group 1.1b lineage. Nitrosospira cluster 3-like AOB performed most bacterial ammonia oxidation in the ZY, LZ and JX soils, whereas the majority of the 13C-AOB in the JD soil was affiliated with the Nitrosomona communis lineage. The 13C-NOB was overwhelmingly

Organic carbon and iron modulate nitrification rates in mangrove swamps of Goa, south west coast of India

Digital Repository Service at National Institute of Oceanography (India)

Krishnan, K.P.; LokaBharathi, P.A.

. The nitrification rates at the control and experimental sites are comparable and ranged from 3.2 plus or minus 1.2 to 18.4 plus or minus 1.9 ng at-N g(sediment) sup(-1) h sup(-1) and 2.7 plus or minus 1.5 to 18.2 plus or minus 0.6 ng at-N g(sediment) sup(-1) h sup...

Biological Water Processor and Forward Osmosis Secondary Treatment

Science.gov (United States)

Shull, Sarah; Meyer, Caitlin

2014-01-01

The goal of the Biological Water Processor (BWP) is to remove 90% organic carbon and 75% ammonium from an exploration-based wastewater stream for four crew members. The innovative design saves on space, power and consumables as compared to the ISS Urine Processor Assembly (UPA) by utilizing microbes in a biofilm. The attached-growth system utilizes simultaneous nitrification and denitrification to mineralize organic carbon and ammonium to carbon dioxide and nitrogen gas, which can be scrubbed in a cabin air revitalization system. The BWP uses a four-crew wastewater comprised of urine and humidity condensate, as on the ISS, but also includes hygiene (shower, shave, hand washing and oral hygiene) and laundry. The BWP team donates 58L per day of this wastewater processed in Building 7.

Effect of chemically and biologically synthesized Ag nanoparticles on the algae growth inhibition

Science.gov (United States)

Anna, Mražiková; Oksana, Velgosová; Jana, Kavuličová

2017-12-01

Over the past few years green methods for preparation of silver nanoparticles has become necessary due to its friendly influence on ecosystem. In the present work antimicrobial properties of biologically synthesized silver nanoparticles (Bio-AgNPs) using green algae extract and chemically synthesized silver nanoparticles (Chem-AgNPs) using sodium citrate against algae Parachlorella kessleri is investigated. Both used Bio-AgNPs and Chem-AgNPs exhibit long-term stability as demonstrated by UV-vis spectroscopy measurements. The results revealed stronger toxic effects of Bio-AgNPs on agar plates what was confirmed clear inhibition zone around wells impregnated with Bio-AgNPs. On the other hand Bio-AgNPs were confirmed to be less toxic in aquatic environments for the growths of green algae P. kessleri comparing to Chem-AgNPs.

Evaluating the Contributions of Atmospheric Deposition of Carbon and Other Nutrients to Nitrification in Alpine Environments

Science.gov (United States)

Oldani, K. M.; Mladenov, N.; Williams, M. W.

2013-12-01

The Colorado Front Range of the Rocky Mountains contains undeveloped, barren soils, yet in this environment there is strong evidence for a microbial role in increased nitrogen (N) export. Barren soils in alpine environments are severely carbon-limited, which is the main energy source for microbial activity and sustenance of life. It has been shown that atmospheric deposition can contain high amounts of organic carbon (C). Atmospheric pollutants, dust events, and biological aerosols, such as bacteria, may be important contributors to the atmospheric organic C load. In this stage of the research we evaluated seasonal trends in the chemical composition and optical spectroscopic (fluorescence and UV-vis absorbance) signatures of snow, wet deposition, and dry deposition in an alpine environment at Niwot Ridge in the Rocky Mountains of Colorado to obtain a better understanding of the sources and chemical character of atmospheric deposition. Our results reveal a positive trend between dissolved organic carbon concentrations and calcium, nitrate and sulfate concentrations in wet and dry deposition, which may be derived from such sources as dust and urban air pollution. We also observed the presence of seasonally-variable fluorescent components that may be attributed to fluorescent pigments in bacteria. These results are relevant because atmospheric inputs of carbon and other nutrients may influence nitrification in barren, alpine soils and, ultimately, the export of nitrate to alpine watersheds.

Review of the inhibition of biological activities of food-related selected toxins by natural compounds.

Science.gov (United States)

Friedman, Mendel; Rasooly, Reuven

2013-04-23

There is a need to develop food-compatible conditions to alter the structures of fungal, bacterial, and plant toxins, thus transforming toxins to nontoxic molecules. The term 'chemical genetics' has been used to describe this approach. This overview attempts to survey and consolidate the widely scattered literature on the inhibition by natural compounds and plant extracts of the biological (toxicological) activity of the following food-related toxins: aflatoxin B1, fumonisins, and ochratoxin A produced by fungi; cholera toxin produced by Vibrio cholerae bacteria; Shiga toxins produced by E. coli bacteria; staphylococcal enterotoxins produced by Staphylococcus aureus bacteria; ricin produced by seeds of the castor plant Ricinus communis; and the glycoalkaloid α-chaconine synthesized in potato tubers and leaves. The reduction of biological activity has been achieved by one or more of the following approaches: inhibition of the release of the toxin into the environment, especially food; an alteration of the structural integrity of the toxin molecules; changes in the optimum microenvironment, especially pH, for toxin activity; and protection against adverse effects of the toxins in cells, animals, and humans (chemoprevention). The results show that food-compatible and safe compounds with anti-toxin properties can be used to reduce the toxic potential of these toxins. Practical applications and research needs are suggested that may further facilitate reducing the toxic burden of the diet. Researchers are challenged to (a) apply the available methods without adversely affecting the nutritional quality, safety, and sensory attributes of animal feed and human food and (b) educate food producers and processors and the public about available approaches to mitigating the undesirable effects of natural toxins that may present in the diet.

Effect of solids retention time and wastewater characteristics on biological phosphorus removal

DEFF Research Database (Denmark)

Henze, Mogens; Aspegren, H.; Jansen, J.l.C.

2002-01-01

with time which has importance in relation to modelling. The overall conclusion of the comparison between the two plants is that the biological phosphorus removal efficiency under practical operating conditions is affected by the SRT in the plant and the wastewater composition. Thus great care should......The paper deals with the effect of wastewater, plant design and operation in relation to biological nitrogen and phosphorus removal and the possibilities to model the processes. Two Bio-P pilot plants were operated for 2.5 years in parallel receiving identical wastewater. The plants had SRT of 4...... and 21 days, the latter had nitrification and denitrification. The plant with 4 days SRT had much more variable biomass characteristics, than the one with the high SRT. The internal storage compounds, PHA, were affected significantly by the concentration of fatty acids or other easily degradable organics...

Short exposure to acetylene to distinguish between nitrifier and denitrifier nitrous oxide production in soil and sediment samples

OpenAIRE

Kester, R.A.; Boer, W. de; Laanbroek, H.J.

1996-01-01

The contribution of nitrifiers and denitrifiers to the nitrous oxide production in slurries of calcareous silt loam and river bank sediment at different oxygen concentrations was determined using acetylene as nitrification inhibitor. The addition of 10 Pa acetylene resulted in inhibition of nitrous oxide production at oxic conditions, but strongly enhanced the nitrous oxide production at oxygen-poor and anoxic conditions. Inhibition of nitrification by short exposure (1 to 24 h) to high conce...

Impact of paint shop decanter effluents on biological treatability of automotive industry wastewater.

Science.gov (United States)

Güven, Didem; Hanhan, Oytun; Aksoy, Elif Ceren; Insel, Güçlü; Çokgör, Emine

2017-05-15

A lab-scale Sequencing Batch Reactor (SBR) was implemented to investigate biological treatability and kinetic characteristics of paint shop wastewater (PSW) together with main stream wastewater (MSW) of a bus production factory. Readily biodegradable and slowly biodegradable COD fractions of MWS were determined by respirometric analysis: 4.2% (S S ), 10.4% (S H ) and 59.3% (X S ). Carbon and nitrogen removal performance of the SBR feeding with MSW alone were obtained as 89% and 58%, respectively. When PSW was introduced to MSW, both carbon and nitrogen removal were deteriorated. Model simulation indicated that maximum heterotrophic growth rate decreased from 7.2 to 5.7day -1 , maximum hydrolysis rates were reduced from 6 to 4day -1 (k hS ) and 4 to 1day -1 (k hX ). Based on the dynamic model simulation for the evaluation of nitrogen removal, a maximum specific nitrifier growth rate was obtained as 0.45day -1 for MSW feeding alone. When PSW was introduced, nitrification was completely inhibited and following the termination of PSW addition, nitrogen removal performance was recovered in about 100 days, however with a much lower nitrifier growth rate (0.1day -1 ), possibly due to accumulation of toxic compounds in the sludge. Obviously, a longer recovery period is required to ensure an active nitrifier community. Copyright © 2017 Elsevier B.V. All rights reserved.

Biological and Pharmacological properties

Indian Academy of Sciences (India)

First page Back Continue Last page Overview Graphics. Biological and Pharmacological properties. NOEA inhibits Ceramidase. Anandamide inhibits gap junction conductance and reduces sperm fertilizing capacity. Endogenous ligands for Cannabinoid receptors (anandamide and NPEA). Antibacterial and antiviral ...

Effect of irrigation, nitrogen application, and a nitrification inhibitor on nitrous oxide, carbon dioxide and methane emissions from an olive (Olea europaea L.) orchard

Energy Technology Data Exchange (ETDEWEB)

Maris, S.C., E-mail: stefania@macs.udl.cat [University of Lleida, Environment and Soil Science Department, Av. Alcalde Rovira Roure 191, E-25198 Lleida (Spain); Teira-Esmatges, M.R. [University of Lleida, Environment and Soil Science Department, Av. Alcalde Rovira Roure 191, E-25198 Lleida (Spain); Arbonés, A.; Rufat, J. [Programa Ús Eficient de l’Aigua, Institut de Recerca i Tecnologia Agroalimentàries (IRTA), Parc Científic i Tecnològic Agroalimentari de Lleida (PCiTAL). Parc de Gardeny, Edifici Fruitcentre, E-2503 Lleida (Spain)

2015-12-15

Drip irrigation combined with nitrogen (N) fertigation is applied in order to save water and improve nutrient efficiency. Nitrification inhibitors reduce greenhouse gas emissions. A field study was conducted to compare the emissions of nitrous oxide (N{sub 2}O), carbon dioxide (CO{sub 2}) and methane (CH{sub 4}) associated with the application of N fertiliser through fertigation (0 and 50 kg N ha{sup −1}), and 50 kg N ha{sup −1} + nitrification inhibitor in a high tree density Arbequina olive orchard. Spanish Arbequina is the most suited variety for super intensive olive groves. This system allows reducing production costs and increases crop yield. Moreover its oil has excellent sensorial features. Subsurface drip irrigation markedly reduced N{sub 2}O and N{sub 2}O + N{sub 2} emissions compared with surface drip irrigation. Fertiliser application significantly increased N{sub 2}O + N{sub 2}, but not N{sub 2}O emissions. Denitrification was the main source of N{sub 2}O. The N{sub 2}O losses (calculated as emission factor) ranging from − 0.03 to 0.14% of the N applied, were lower than the IPCC (2007) values. The N{sub 2}O + N{sub 2} losses were the largest, equivalent to 1.80% of the N applied, from the 50 kg N ha{sup −1} + drip irrigation treatment which resulted in water filled pore space > 60% most of the time (high moisture). Nitrogen fertilisation significantly reduced CO{sub 2} emissions in 2011, but only for the subsurface drip irrigation strategies in 2012. The olive orchard acted as a net CH{sub 4} sink for all the treatments. Applying a nitrification inhibitor (DMPP), the cumulative N{sub 2}O and N{sub 2}O + N{sub 2} emissions were significantly reduced with respect to the control. The DMPP also inhibited CO{sub 2} emissions and significantly increased CH{sub 4} oxidation. Considering global warming potential, greenhouse gas intensity, cumulative N{sub 2}O emissions and oil production, it can be concluded that applying DMPP with 50 kg N ha{sup −1

Tracking and quantification of nitrifying bacteria in biofilm and mixed liquor of a partial nitrification MBBR pilot plant using fluorescence in situ hybridization

International Nuclear Information System (INIS)

Abzazou, Tarik; Araujo, Rosa M.; Auset, María; Salvadó, Humbert

2016-01-01

A moving bead biofilm reactor (MBBR) pilot plant was implemented as a partial nitrification process for pre-treatment of ammonium-rich liquors (676 ± 195 mg L"−"1), and studied for 479 days under variations in hydraulic retention time. The main purpose of this work, was the study of dynamics abundance of total bacteria and single-cells nitrifying bacteria belonging to ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB) in biofilms and mixed liquor of the plant. The microbial monitoring was successfully achieved using fluorescence in situ hybridization combined with flocs disaggregation protocol as a useful microbial monitoring tool. A partial nitrification process with a N-NH_4"+ removal rate of about 38.6 ± 14.8% was successfully achieved at 211 days after start-up, with a clear dominance of AOB, which accounted for 11.3 ± 17.0% of total bacterial cells compared with only 2.1 ± 4.0% of NOB. The effluent obtained was subsequently supplied to an Anammox reactor for complete ammonium treatment. - Highlights: • Partial nitrification process in a MBBR fed with ammonium-rich liquor was achieved. • The operational key parameters were the HRT and temperature. • DAPI and FISH were useful to monitoring microbial composition of MBBR pilot plant. • The AOB were the dominant nitrifying bacteria, presenting 11.3% of total bacteria. • A significant correlation (R = 0.68) between AOB and ammonia removal was found.

Tracking and quantification of nitrifying bacteria in biofilm and mixed liquor of a partial nitrification MBBR pilot plant using fluorescence in situ hybridization

Energy Technology Data Exchange (ETDEWEB)

Abzazou, Tarik, E-mail: tabzazou@ub.edu [Department of Microbiology, Faculty of Biology, University of Barcelona, Av. Diagonal 643, 08028 Barcelona (Spain); Araujo, Rosa M., E-mail: raraujo@ub.edu [Department of Microbiology, Faculty of Biology, University of Barcelona, Av. Diagonal 643, 08028 Barcelona (Spain); Auset, María, E-mail: maria.auset.vallejo@acciona.com [ACCIONA AGUA, S.A., Av de les Garrigues 22, El Prat de Llobregat, 08820 Barcelona (Spain); Salvadó, Humbert, E-mail: hsalvado@ub.edu [Department of Animal Biology, Faculty of Biology, University of Barcelona, Av. Diagonal 643, 08028 Barcelona (Spain)

2016-01-15

A moving bead biofilm reactor (MBBR) pilot plant was implemented as a partial nitrification process for pre-treatment of ammonium-rich liquors (676 ± 195 mg L{sup −1}), and studied for 479 days under variations in hydraulic retention time. The main purpose of this work, was the study of dynamics abundance of total bacteria and single-cells nitrifying bacteria belonging to ammonia-oxidizing bacteria (AOB) and nitrite-oxidizing bacteria (NOB) in biofilms and mixed liquor of the plant. The microbial monitoring was successfully achieved using fluorescence in situ hybridization combined with flocs disaggregation protocol as a useful microbial monitoring tool. A partial nitrification process with a N-NH{sub 4}{sup +} removal rate of about 38.6 ± 14.8% was successfully achieved at 211 days after start-up, with a clear dominance of AOB, which accounted for 11.3 ± 17.0% of total bacterial cells compared with only 2.1 ± 4.0% of NOB. The effluent obtained was subsequently supplied to an Anammox reactor for complete ammonium treatment. - Highlights: • Partial nitrification process in a MBBR fed with ammonium-rich liquor was achieved. • The operational key parameters were the HRT and temperature. • DAPI and FISH were useful to monitoring microbial composition of MBBR pilot plant. • The AOB were the dominant nitrifying bacteria, presenting 11.3% of total bacteria. • A significant correlation (R = 0.68) between AOB and ammonia removal was found.

Effects of combined application of organic and inorganic fertilizers plus nitrification inhibitor DMPP on nitrogen runoff loss in vegetable soils.

Science.gov (United States)

Yu, Qiaogang; Ma, Junwei; Zou, Ping; Lin, Hui; Sun, Wanchun; Yin, Jianzhen; Fu, Jianrong

2015-01-01

The application of nitrogen fertilizers leads to various ecological problems such as large amounts of nitrogen runoff loss causing water body eutrophication. The proposal that nitrification inhibitors could be used as nitrogen runoff loss retardants has been suggested in many countries. In this study, simulated artificial rainfall was used to illustrate the effect of the nitrification inhibitor DMPP (3,4-dimethyl pyrazole phosphate) on nitrogen loss from vegetable fields under combined organic and inorganic nitrogen fertilizer application. The results showed that during the three-time simulated artificial rainfall period, the ammonium nitrogen content in the surface runoff water collected from the DMPP application treatment increased by 1.05, 1.13, and 1.10 times compared to regular organic and inorganic combined fertilization treatment, respectively. In the organic and inorganic combined fertilization with DMPP addition treatment, the nitrate nitrogen content decreased by 38.8, 43.0, and 30.1% in the three simulated artificial rainfall runoff water, respectively. Besides, the nitrite nitrogen content decreased by 95.4, 96.7, and 94.1% in the three-time simulated artificial rainfall runoff water, respectively. A robust decline in the nitrate and nitrite nitrogen surface runoff loss could be observed in the treatments after the DMPP addition. The nitrite nitrogen in DMPP addition treatment exhibited a significant low level, which is near to the no fertilizer application treatment. Compared to only organic and inorganic combined fertilizer treatment, the total inorganic nitrogen runoff loss declined by 22.0 to 45.3% in the organic and inorganic combined fertilizers with DMPP addition treatment. Therefore, DMPP could be used as an effective nitrification inhibitor to control the soil ammonium oxidation in agriculture and decline the nitrogen runoff loss, minimizing the nitrogen transformation risk to the water body and being beneficial for the ecological environment.

Field study of nitrous oxide production with in situ aeration in a closed landfill site.

Science.gov (United States)

Nag, Mitali; Shimaoka, Takayuki; Nakayama, Hirofumi; Komiya, Teppei; Xiaoli, Chai

2016-03-01

Nitrous oxide (N(2)O) has gained considerable attention as a contributor to global warming and depilation of stratospheric ozone layer. Landfill is one of the high emitters of greenhouse gas such as methane and N(2)O during the biodegradation of solid waste. Landfill aeration has been attracted increasing attention worldwide for fast, controlled and sustainable conversion of landfills into a biological stabilized condition, however landfill aeration impel N(2)O emission with ammonia removal. N(2)O originates from the biodegradation, or the combustion of nitrogen-containing solid waste during the microbial process of nitrification and denitrification. During these two processes, formation of N(2)O as a by-product from nitrification, or as an intermediate product of denitrification. In this study, air was injected into a closed landfill site and investigated the major N(2)O production factors and correlations established between them. The in-situ aeration experiment was carried out by three sets of gas collection pipes along with temperature probes were installed at three different distances of one, two and three meter away from the aeration point; named points A-C, respectively. Each set of pipes consisted of three different pipes at three different depths of 0.0, 0.75 and 1.5 m from the bottom of the cover soil. Landfill gases composition was monitored weekly and gas samples were collected for analysis of nitrous oxide concentrations. It was evaluated that temperatures within the range of 30-40°C with high oxygen content led to higher generation of nitrous oxide with high aeration rate. Lower O(2) content can infuse N(2)O production during nitrification and high O(2) inhibit denitrification which would affect N(2)O production. The findings provide insights concerning the production potentials of N(2)O in an aerated landfill that may help to minimize with appropriate control of the operational parameters and biological reactions of N turnover. Investigation of

Contour detection based on nonclassical receptive field inhibition

NARCIS (Netherlands)

Grigorescu, Cosmin; Petkov, Nicolai; Westenberg, Michel A.

We propose a biologically motivated computational step, called nonclassical receptive field (non-CRF) inhibition, more generally surround inhibition or suppression, to improve contour detection in machine vision. Non-CRF inhibition is exhibited by 80% of the orientation-selective neurons in the

On-line monitoring and modelling based process control of high rate nitrification - lab scale experimental results

Energy Technology Data Exchange (ETDEWEB)

Pirsing, A. [Technische Univ. Berlin (Germany). Inst. fuer Verfahrenstechnik; Wiesmann, U. [Technische Univ. Berlin (Germany). Inst. fuer Verfahrenstechnik; Kelterbach, G. [Technische Univ. Berlin (Germany). Inst. fuer Mess- und Regelungstechnik; Schaffranietz, U. [Technische Univ. Berlin (Germany). Inst. fuer Mess- und Regelungstechnik; Roeck, H. [Technische Univ. Berlin (Germany). Inst. fuer Mess- und Regelungstechnik; Eichner, B. [Technische Univ. Berlin (Germany). Inst. fuer Anorganische und Analytische Chemie; Szukal, S. [Technische Univ. Berlin (Germany). Inst. fuer Anorganische und Analytische Chemie; Schulze, G. [Technische Univ. Berlin (Germany). Inst. fuer Anorganische und Analytische Chemie

1996-09-01

This paper presents a new concept for the control of nitrification in highly polluted waste waters. The approach is based on mathematical modelling. To determine the substrate degradation rates of the microorganisms involved, a mathematical model using gas measurement is used. A fuzzy-controller maximises the capacity utilisation efficiencies. The experiments carried out in a lab-scale reactor demonstrate that even with highly varying ammonia concentrations in the influent, the nitrogen concentrations in the effluent can be kept within legal limits. (orig.). With 11 figs.

Soil microbial toxicity of eight polycyclic aromatic compounds: effects on nitrification, the genetic diversity of bacteria, and the total number of protozoans

DEFF Research Database (Denmark)

Sverdrup, Line Emilie; Ekelund, Flemming; Krogh, Paul Henning

2002-01-01

mg/kg. For effects on nitrification, toxicity (NOEC values) expressed as soil pore-water concentrations (log10(micromol/L)) showed a significant inverse relationship with lipophilicity (log octanol-water partition coefficient) of the substances (r2 = 0.69, p = 0.011, n = 8). This finding could...

Retention of titanium dioxide nanoparticles in biological activated carbon filters for drinking water and the impact on ammonia reduction.

Science.gov (United States)

Liu, Zhiyuan; Yu, Shuili; Park, Heedeung; Liu, Guicai; Yuan, Qingbin

2016-06-01

Given the increasing discoveries related to the eco-toxicity of titanium dioxide (TiO2) nanoparticles (NPs) in different ecosystems and with respect to public health, it is important to understand their potential effects in drinking water treatment (DWT). The effects of TiO2 NPs on ammonia reduction, ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in biological activated carbon (BAC) filters for drinking water were investigated in static and dynamic states. In the static state, both the nitrification potential and AOB were significantly inhibited by 100 μg L(-1) TiO2 NPs after 12 h (p  0.05). In the dynamic state, different amounts of TiO2 NP pulses were injected into three pilot-scale BAC filters. The decay of TiO2 NPs in the BAC filters was very slow. Both titanium quantification and scanning electron microscope analysis confirmed the retention of TiO2 NPs in the BAC filters after 134 days of operation. Furthermore, the TiO2 NP pulses considerably reduced the performance of ammonia reduction. This study identified the retention of TiO2 NPs in BAC filters and the negative effect on the ammonia reduction, suggesting a potential threat to DWT by TiO2 NPs.

Performance and microbial community analysis of bio-electrocoagulation on simultaneous nitrification and denitrification in submerged membrane bioreactor at limited dissolved oxygen.

Science.gov (United States)

Li, Liang; Dong, Yihua; Qian, Guangsheng; Hu, Xiaomin; Ye, Linlin

2018-06-01

A pair of Fe-C electrodes was installed in a traditional submerged membrane bioreactor (MBR, Rc), and a novel asynchronous periodic reversal bio-electrocoagulation system (Re) was developed. The simultaneous nitrification and denitrification (SND) performance was discussed under limited dissolved oxygen (DO). Results showed that electrocoagulation enhanced total nitrogen (TN) removal from 59.48% to 75.09% at 1.2 mg/L DO. Additionally, Fe electrode could increase sludge concentration, particle size, and enzyme activities related to nitrogen removal. The enzyme activities of Hydroxylamine oxidoreductase (HAO), Nitrate Reductase (NAR), nitric oxide reductase NOR and nitrous oxide reductase (N 2 OR) in Re were 38.35%, 21.59%, 89.96% and 38.64% higher than Rc, respectively. Moreover, electrocoagulation was advantageous for nitrite accumulation, indicating partial nitrification and denitrification were more easily achieved in Re. Besides, results from high throughput sequencing analysis revealed that electrocoagulation increased the relative abundance of most genera related to nitrogen removal, including Nitrosomonas, Comamonadaceae_unclassified, Haliangium and Denitratisoma. Copyright © 2018 Elsevier Ltd. All rights reserved.

Adverse effects of erythromycin on the structure and chemistry of activated sludge

International Nuclear Information System (INIS)

Louvet, J.N.; Giammarino, C.; Potier, O.; Pons, M.N.

2010-01-01

This study examines the effects of erythromycin on activated sludge from two French urban wastewater treatment plants (WWTPs). Wastewater spiked with 10 mg/L erythromycin inhibited the specific evolution rate of chemical oxygen demand (COD) by 79% (standard deviation 34%) and the specific N-NH 4 + evolution rate by 41% (standard deviation 25%). A temporary increase in COD and tryptophan-like fluorescence, as well as a decrease in suspended solids, were observed in reactors with wastewater containing erythromycin. The destruction of activated sludge flocs was monitored by automated image analysis. The effect of erythromycin on nitrification was variable depending on the sludge origin. Erythromycin inhibited the specific nitrification rate in sludge from one WWTP, but increased the nitrification rate at the other facility. - Erythromycin toxicity on activated sludge is expected to reduce pollution removal.

Biological denitrification of high-nitrates wastes generated in the nuclear industry

International Nuclear Information System (INIS)

Francis, C.W.

1980-01-01

Biological denitrification appears to be one of the most effective methods to remove nitrates from wastewater streams (Christenson and Harremoes, 1975). However, most of the research and development work has been centered on removal of nitrates from sewage or agricultural drainage waters, nitrate nitrogen concentration usually less than 50 g/m 3 . Work was initiated at Oak Ridge National Laboratory (ORNL) in 1974 to test the use of biological nitrification in the removal of high concentrations of nitrate (in excess of 1.0 kg NO 3 -N/m 3 ) from uranium purification waste streams. Since then, a full-scale treatment facility, a stirred reactor, has been installed at the Y-12 plant; and a pilot-plant, using a fluidized bed, has been proposed at Portsmouth Gaseous Diffusion Plant. The objective of this manuscript is to present some applied microbiological research relating to possible constraints in biologically denitrifying certain waste streams in the nuclear industry and comparing the effectiveness of denitrification of these waste streams in three bench scale reactors, (1) a continuous flow-stirred reactor, (2) stirred bed rector, and (3) a fluidized bed reactor

Biological removal of the xenobiotic trichloroethylene (TCE) through cometabolism in nitrifying systems.

Science.gov (United States)

Kocamemi, B Alpaslan; Ceçen, F

2010-01-01

In the present study, cometabolic TCE degradation was evaluated using NH(4)-N as the growth-substrate. At initial TCE concentrations up to 845 microg/L, TCE degradation followed first-order kinetics. The increase in ammonium utilization rate favored the degradation of TCE. This ensured that biological transformation of TCE in nitrifying systems is accomplished through a cometabolic pathway by the catalysis of non-specific ammonia oxygenase enzyme of nitrifiers. The transformation yield (T(y)) of TCE, the amount of TCE degraded per unit mass of NH(4)-N, strongly depended on the initial NH(4)-N and TCE concentrations. In order to allow a rough estimation of TCE removal and nitrification at different influent TCE and NH(4)-N concentrations, a linear relationship was developed between 1/T(y) and the initial NH(4)-N/TCE ratio. The estimated T(y) values lead to the conclusion that nitrifying systems are promising candidates for biological removal of TCE through cometabolism.

Shell Biofilm Nitrification and Gut Denitrification Contribute to Emission of Nitrous Oxide by the Invasive Freshwater Mussel Dreissena polymorpha (Zebra Mussel)

Science.gov (United States)

Svenningsen, Nanna B.; Heisterkamp, Ines M.; Sigby-Clausen, Maria; Larsen, Lone H.; Nielsen, Lars Peter; Stief, Peter

2012-01-01

Nitrification in shell biofilms and denitrification in the gut of the animal accounted for N2O emission by Dreissena polymorpha (Bivalvia), as shown by gas chromatography and gene expression analysis. The mussel's ammonium excretion was sufficient to sustain N2O production and thus potentially uncouples invertebrate N2O production from environmental N concentrations. PMID:22492461

Sequential nitrification and denitrification in a novel palm shell granular activated carbon twin-chamber upflow bio-electrochemical reactor for treating ammonium-rich wastewater.

Science.gov (United States)

Mousavi, Seyyedalireza; Ibrahim, Shaliza; Aroua, Mohamed Kheireddine

2012-12-01

In this study, a twin-chamber upflow bio-electrochemical reactor packed with palm shell granular activated carbon as biocarrier and third electrode was used for sequential nitrification and denitrification of nitrogen-rich wastewater under different operating conditions. The experiments were performed at a constant pH value for the denitrification compartment. The effect of variables, namely, electric current (I) and hydraulic retention time (HRT), on the pH was considered in the nitrification chamber. The response surface methodology was used based on three levels to develop empirical models for the study on the effects of HRT and current values as independent operating variables on NH(4)(+)-N removal. The results showed that ammonium was reduced within the function of an extensive operational range of electric intensity (20-50 mA) and HRT (6-24h). The optimum condition for ammonium oxidation (90%) was determined with an I of 32 mA and HRT of 19.2h. Copyright © 2012 Elsevier Ltd. All rights reserved.

Influence of natural zeolite and nitrification inhibitor on organics degradation and nitrogen transformation during sludge composting.

Science.gov (United States)

Zhang, Junya; Sui, Qianwen; Li, Kun; Chen, Meixue; Tong, Juan; Qi, Lu; Wei, Yuansong

2016-01-01

Sludge composting is one of the most widely used treatments for sewage sludge resource utilization. Natural zeolite and nitrification inhibitor (NI) are widely used during composting and land application for nitrogen conservation, respectively. Three composting reactors (A--the control, B--natural zeolite addition, and C--3,4-dimethylpyrazole phosphate (DMPP) addition) were established to investigate the influence of NI and natural zeolite addition on organics degradation and nitrogen transformation during sludge composting conducted at the lab scale. The results showed that, in comparison with the control, natural zeolite addition accelerated organics degradation and the maturity of sludge compost was higher, while the DMPP addition slowed down the degradation of organic matters. Meanwhile, the nitrogen transformation functional genes including those responses for nitrification (amoA and nxrA) and denitrification (narG, nirS, nirK, and nosZ) were quantified through quantitative PCR (qPCR) to investigate the effects of natural zeolites and DMPP addition on nitrogen transformation. Although no significant difference in the abundance of nitrogen transformation functional genes was observed between treatments, addition of both natural zeolite and DMPP increases the final total nitrogen content by 48.6% and 23.1%, respectively. The ability of natural zeolite for nitrogen conservation was due to the absorption of NH3 by compost, and nitrogen conservation by DMPP was achieved by the source reduction of denitrification. Besides, it was assumed that the addition of natural zeolite and DMPP may affect the activity of these genes instead of the abundance.

Enhancement of oxygen transfer and nitrogen removal in a membrane separation bioreactor for domestic wastewater treatment.

Science.gov (United States)

Chiemchaisri, C; Yamamoto, K

2005-01-01

Biological nitrogen removal in a membrane separation bioreactor developed for on-site domestic wastewater treatment was investigated. The bioreactor employed hollow fiber membrane modules for solid-liquid separation so that the biomass could be completely retained within the system. Intermittent aeration was supplied with 90 minutes on and off cycle to achieve nitrification and denitrification reaction for nitrogen removal. High COD and nitrogen removal of more than 90% were achieved under a moderate temperature of 25 degrees C. As the temperature was stepwise decreased from 25 to 5 degrees C, COD removal in the system could be constantly maintained while nitrogen removal was deteriorated. Nevertheless, increasing aeration supply could enhance nitrification at low temperature with benefit from complete retention of nitrifying bacteria within the system by membrane separation. At low operating temperature range of 5 degrees C, nitrogen removal could be recovered to more than 85%. A mathematical model considering diffusion resistance of limiting substrate into the bio-particle is applied to describe nitrogen removal in a membrane separation bioreactor. The simulation suggested that limitation of the oxygen supply was the major cause of inhibition of nitrification during temperature decrease. Nevertheless, increasing aeration could promote oxygen diffusion into the bio-particle. Sufficient oxygen was supplied to the nitrifying bacteria and the nitrification could proceed. In the membrane separation bioreactor, biomass concentration under low temperature operation was allowed to increase by 2-3 times of that of moderate temperature to compensate for the loss of bacterial activities so that the temperature effect was masked.

The Role of Microbial Processes in the Oxidation and Removal of Ammonia from Drinking Water

Science.gov (United States)

The purpose of this study was two-fold: (1) to monitor and evaluate nitrification in a full-scale iron removal filtration plant with biologically active granular media filters located in Ohio, and (2) to determine how to most efficiently regain nitrification following filter rebe...

Ammonium sorption and ammonia inhibition of nitrite-oxidizing bacteria explain contrasting soil N2O production

Science.gov (United States)

Venterea, R. T.; Sadowsky, M.; Breuillin-Sessoms, F.; Wang, P.; Clough, T. J.; Coulter, J. A.

2015-12-01

Better understanding of process controls over nitrous oxide (N2O) production in urine-impacted 'hot spots' and fertilizer bands is needed to improve mitigation strategies and emission models. Following amendment with bovine (Bos taurus) urine (Bu) or urea (Ur), we measured inorganic N, pH, N2O, and genes associated with nitrification in two soils ('L' and 'W') having similar texture, pH, C, and C/N ratio. Solution-phase ammonia (slNH3) was also calculated accounting for non-linear ammonium (NH4+) sorption capacities (ASC). Soil W displayed greater nitrification rates and nitrate (NO3-) levels than soil L, but was more resistant to nitrite (NO2-) accumulation and produced two to ten times less N2O than soil L. Genes associated with NO2- oxidation (nxrA) increased substantially in soil W but remained static in soil L. Soil NO2- was strongly correlated with N2O production, and cumulative (c-) slNH3 explained 87% of the variance in c-NO2-. Differences between soils were explained by greater slNH3 in soil L which inhibited NO2- oxidization leading to greater NO2- levels and N2O production. This is the first study to correlate the dynamics of soil slNH3, NO2-, N2O and nitrifier genes, and the first to show how ASC can regulate NO2- levels and N2O production.

Fibrous Support Stabilizes Nitrification Performance of a Membrane-Aerated Biofilm: The Effect of Liquid Flow Perturbation

DEFF Research Database (Denmark)

Terada, Akihiko; Ito, J; Matsumoto, S

2009-01-01

no boundary layer between the fibrous material and bulk liquid, was 5.85 m/d at an air pressure of 27 kPa, which was comparable to that value of the MABR (5.54 m/d). The amount of biomass on the fibrous support with a silicone tube was 2.48 times larger than on the bare silicone. The biomass loss after a high...... a high liquid flow rate condition to eliminate excessive biomass, indicating that regular maintenance is essential to eliminate excessive biofilm from a MABR for nitrification, which potentially acts as a NH4+ diffusion barrier....

Impact of solid retention time and nitrification capacity on the ability of activated sludge to remove pharmaceuticals

DEFF Research Database (Denmark)

Falås, Per; Andersen, Henrik Rasmus; Ledin, Anna

2012-01-01

Removal of five acidic pharmaceuticals (ibuprofen, ketoprofen, naproxen, diclofenac and clofibric acid) by activated sludge from five municipal activated sludge treatment processes, with various sludge ages and nitrification capacities, was assessed through batch experiments. The increase...... in aerobic sludge age from 1-3 to 7 days seemed to be critical for the removal of naproxen and ketoprofen, with markedly higher rates of removal at sludge ages of 7 days or more. No removal was shown for diclofenac and clofibric acid, while high rates were observed for ibuprofen in all investigated sludges...

ANALYSIS OF TRICKLE BED AND PACKED BUBBLE COLUMN BIOREACTORS FOR COMBINED CARBON OXIDATION AND NITRIFICATION

Directory of Open Access Journals (Sweden)

Iliuta I.

2002-01-01

Full Text Available Biological removal of nitrogen and carbon by combined nitrification-oxidation in gas-liquid trickle-bed reactors (TBRs and packed bubble columns (PBCs was analyzed theoretically using a transient two-dimensional model. The model describes TBR and PBC performances at steady state as well as their transient response to a pulse or step increase in inlet methanol and NH4+-nitrogen concentrations. The hydrodynamic parameters were determined from residence time distribution measurements, using an imperfect pulse method for time-domain analysis of nonideal pulse tracer response. A transient diffusion model of the tracer in the porous particle coupled with the piston-dispersion-exchange model was used to interpret the residence time distribution curves obtained. Gas-liquid mass transfer parameters were determined by a stationary method based on the least-squares fit of the calculated concentration profiles in gas phase to the experimental values. Analysis of steady-state performances showed that under like operating conditions, the TBR outperforms the PBC in terms of conversions. A pulse change in the inlet methanol or NH4+-nitrogen concentration causes a negligible transient change in the outlet methanol concentration and a negligible or high transient change in the outlet NH4+-nitrogen concentration. A step change in the inlet methanol concentration causes the negligible transient change in the methanol outlet concentration and a relatively important transient change in the NH4+-nitrogen outlet concentration. A step increase in the NH4+-nitrogen inlet concentration induces a drastic transient change in the NH4+-nitrogen outlet concentration but a negligible transient change in the methanol outlet concentration.

Nitrogen management and nitrification inhibitor effects on nitrogen-15 urea: 2. Nitrogen leaching and balance

International Nuclear Information System (INIS)

Walters, D.T.; Malzer, G.L.

1990-01-01

Nitrification inhibitors (NI) may reduce N leaching losses, and should have the greatest effect on sandy soils where leaching potential is high. This study used 27 lysimeters to evaluate the effect of a NI, nitrapyrin [2-chloro-6(trichloromethyl) pyridine], on soil water percolation (SWP) and N leaching losses from an irrigated sandy loam soil (Typic Hapludoll) planted with corn (Zea mays L.), and monitor the fate of a single application of 15 N-enriched urea over a multiyear period. Urea was applied at 90 and 180 kg N ha -1 yr -1 for a 3-yr period, with and without NI, and with and without incorporation. Urea + NI reduced SWP between planting and silking in 2 out of 3 yr when growing degree days (GDD) were high. After silking, SWP was reduced when urea + NI was incorporated and leaching load was high. A twofold increase in N rate resulted in an average of 3.4 times more N leached over 3 yr. The NI influenced time of N loss but not total N loss. Leaching losses of fertilizer-derived N (FDN) were delayed 25 to 50d when urea + NI were incorporated. The leaching load required to reach the maximum rate of FDN loss was higher with urea + NI. Leaching losses of fertilizer N were three times greater when determined by the difference method than by isotope-ratio analysis. Differing results with these two calculations are attributed to isotope dilution with indigenous soil N as a result of microbial activity. Nitrification inhibitors may reduce the potential for nonpoint-source pollution by delaying NO 3 leaching, but will be most effective if coupled with proper N rates and conservative irrigation water management

A gravity independent biological grey water treatment system for space applications

Science.gov (United States)

Nashashibi, Majda'midhat

2002-09-01

Biological treatment of grey water in space presents serious challenges, stemming mainly from microgravity conditions. The major concerns are phase separation and mass transfer limitations. To overcome solid-liquid phase separation, novel immobilized cell packed bed (ICPB) bioreactors have been developed to treat synthetic grey water. Packed bed bioreactors provide a unique environment for attached microbial growth resulting in high biomass concentrations, which greatly enhance process efficiency with substantial reductions in treatment time and reactor volume. To overcome the gas-liquid phase separation and mass transfer limitations, an oxygenation module equipped with tubular membranes has been developed to deliver bubble-less oxygen under pressure. The selected silicone membranes are hydrophobic, non-porous and oxygen selective. Oxygen dissolves in the walls of the membranes and then diffuses into the water without forming bubbles. Elevated pressures maintain all gaseous by-products in solution and provide high dissolved oxygen concentrations within the system. The packing media are lightweight, inexpensive polyethylene terephthalate (PET) flakes that have large specific surface area, act as a filter for solids and yield highly tortuous flow paths thereby increasing the contact time between the biomass and contaminants. Tests on both pressurized and ambient pressure ICPB bioreactors revealed organic carbon removal efficiencies over 90%. Despite the high ammonia level in the influent, nitrification occured in both the ambient pressure and pressurized nitrification bioreactors at efficiencies of 80% and 60%, respectively. Biomass yield was approximately 0.20 g volatile suspended solids per gram of grey water-COD processed in the pressurized bioreactor. The biomass yield of such novel aerobic ICPB systems is comparable to that of anaerobic processes. These efficient systems produce minimal amounts of biomass compared to other aerobic processes, making them less

[Isolation, Identification and Nitrogen Removal Characteristics of a Heterotrophic Nitrification-Aerobic Denitrification Strain y3 Isolated from Marine Environment].

Science.gov (United States)

Sun, Qing-hua; Yu, De-shuang; Zhang, Pei-yu; Lin, Xue-zheng; Xu, Guang-yao; Li, Jin

2016-03-15

A heterotrophic nitrification--aerobic denitrification bacterium named y3 was isolated from the sludge of Jiaozhou Bay using the enrichment medium with seawater as the matrix. It was identified as Pseudomonas sp. based on the morphological observation, physiological experiments and sequence analysis of 16S rRNA. The experiment results showed that the optimal carbon resource was sodium citrate, the optimal pH was 7.0, and the optimal C/N was 13. The strain could use NH₄Cl, NaNO₂ and KNO₃ as sole nitrogen source, and the removal efficiencies were 98.69%, 78.38% and 72.95% within 20 hours, respectively. There was no nitrate and nitrite accumulation during the heterotrophic nitrification process. Within 20 hours, the nitrogen removal efficiencies were 99.56%, 99.75% and 99.41%, respectively, in the mixed system with NO₃⁻-N: NO²⁻-N of 2:1, 1:1 and 1:2. When the NH₄⁺-N: NO₃⁻-N ratios were 2: 1 , 1: 1 , 1: 2, the nitrogen removal efficiencies were all 100% . When the NH₄⁺-N:NO₂⁻-N ratios were 2:1,1:1,1:2, the nitrogen removal efficiencies were 90.43%, 92.79% and 99.96%, respectively. They were higher than those with single nitrogen source. As a result, strain y3 had good nitrogen removal performance in high saline wastewater treatment.

Contribution of nitrification and denitrification to the NO and N2O emissions of an acid forest soil, a river sediment and a fertilized grassland soil

NARCIS (Netherlands)

Kester, R.A.; Meijer, M.L.; Libochant, J.A.; De Boer, W.; Laanbroek, H.J.

1997-01-01

Most studies determining the contribution of nitrification and denitrification to NO and N2O emissions from soils have been performed in agricultural systems, often with homogenized soil samples. More information about the nitrifier and denitrifier contribution in non-agricultural systems may

Achieving partial nitrification in a novel six basins alternately operating activated sludge process treating domestic wastewater

Energy Technology Data Exchange (ETDEWEB)

Mohammed, Rusul Naseer; Arab, Saad; Xiwu, Lu [Southeast University, Nanjing (China)

2013-11-15

A novel technology was developed to achieve partial nitrification at moderately low DO and short HRT, which would save the aeration cost and have the capacity to treat a wide range of low-strength real wastewater. The process enables a relatively stable whereas nitrite accumulation rate (NO{sub 2}-AR) was stabilized over 94% in the last aerobic basin on average of each phase through a combination of short HRT and low DO level. Low DO did not produce sludge with poorer settleability. The morphology and internal structure of the granular sludge was observed by using a scanning electron microscope (SEM) analysis during a long-term operation. The images indicated that thick clusters of spherical cells and small rod-shaped cells (NOB and AOB are rod-shaped to spherical cells) were the dominant population structure, rather than filamentous and other bacteria under a combination of low DO and short HRT, which gives a good indication of nitrite accumulation achievement. MPN method was used to correlate AOB numbers with nutrient removal. It showed that an ammonia-oxidizing bacterium (AOB) was the dominant nitrifying bacteria, whereas high NO{sub 2}-AR was achieved at AOB number of 5.33x10{sup 8} cell/g MLSS. Higher pollutant removal efficiency of 86.2%, 98% and 96.1%, for TN, NH{sub 4}{sup +}-N, and TP, respectively, was achieved by a novel six basin activated sludge process (SBASP) at low DO level and low C/N ratio which were approximately equal to the complete nitrification-denitrification with the addition of sodium acetate (NaAc) at normal DO level of (1.5-2.5 mg/L)

Impacts of organic and inorganic fertilizers on nitrification in a cold climate soil are linked to the bacterial ammonia oxidizer community.

Science.gov (United States)

Fan, Fenliang; Yang, Qianbao; Li, Zhaojun; Wei, Dan; Cui, Xi'an; Liang, Yongchao

2011-11-01

The microbiology underpinning soil nitrogen cycling in northeast China remains poorly understood. These agricultural systems are typified by widely contrasting temperature, ranging from -40 to 38°C. In a long-term site in this region, the impacts of mineral and organic fertilizer amendments on potential nitrification rate (PNR) were determined. PNR was found to be suppressed by long-term mineral fertilizer treatment but enhanced by manure treatment. The abundance and structure of ammonia-oxidizing bacterial (AOB) and archaeal (AOA) communities were assessed using quantitative polymerase chain reaction and denaturing gradient gel electrophoresis techniques. The abundance of AOA was reduced by all fertilizer treatments, while the opposite response was measured for AOB, leading to a six- to 60-fold reduction in AOA/AOB ratio. The community structure of AOA exhibited little variation across fertilization treatments, whereas the structure of the AOB community was highly responsive. PNR was correlated with community structure of AOB rather than that of AOA. Variation in the community structure of AOB was linked to soil pH, total carbon, and nitrogen contents induced by different long-term fertilization regimes. The results suggest that manure amendment establishes conditions which select for an AOB community type which recovers mineral fertilizer-suppressed soil nitrification.

Effect of nitrification inhibitors on the content of available nitrogen forms in the soil under maize (Zea mays, L. growing

Directory of Open Access Journals (Sweden)

Zuzana PANAKOVA

2016-12-01

Full Text Available The objective of this research was to investigate the effect of nitrification inhibitors (dicyandiamide and 1,2,4 triazole on the content of nitrate and ammonium nitrogen in the soil and the effectiveness of nitrogen-sulphur nutrition of maize. The research was conducted in field small-plot experiment with maize on Haplic Luvisol with dominance of clay fraction in experimental years 2012 to 2015. The dose of nitrogen in all experimental treatments was 160 kg*ha-1 and was applied at one shot or split in three partial doses. Soil samples from all examined treatments were taken from three soil depths (0.0-0.3 m, 0.3-0.6 m and 0.6-0.9 m, respectively by probe rod in 4-5 week intervals. Achieved results indicate that on the average of four years and three depths of the soil profile, application of nitrification inhibitors contained in fertilizer ENSIN considerably reduced portion of nitrate nitrogen from the content of mineral nitrogen in the soil by 7-32 relative %. The application of fertilizer ENSIN considerably increased content of ammonium nitrogen in the soil by 10-59 relative %. A favourable effect on increase of ammonium nitrogen content and reduction of nitrate nitrogen content was found out in spite of the fact that in this treatment the total dose of fertilizer was applied at one shot.

Effective mitigation of nitrate leaching and nitrous oxide emissions in intensive vegetable production systems using a nitrification inhibitor, dicyandiamide

Energy Technology Data Exchange (ETDEWEB)

Cui, Min; Sun, Xuecheng; Hu, Chengxiao; Tan, Qiling; Zhao, Changsheng [Huazhong Agricultural Univ., Wuhan (China). Key Lab. of Subtropical Agricultural Resources and Environment; Di, Hong J. [Lincoln Univ., Christchurch (New Zealand). Center for Soil and Environment Research

2011-07-15

Vegetable production is one of the most intensive agricultural systems with high rates of nitrogen (N) fertilizer use and irrigation, conditions conducive for nitrate (NO{sub 3}{sup -}) leaching, and nitrous oxide (N{sub 2}O) emissions. The objective of this study was to determine the effectiveness of a nitrification inhibitor, dicyandiamide (DCD), in decreasing NO{sub 3}{sup -} leaching and N{sub 2}O emissions in vegetable production systems. Twenty-four undisturbed soil monolith lysimeters (610 mm in diameter; 700 mm in depth; surface area, 0.29 m{sup 2}) with two different soils, Huangzongrang (alfisol) and Chaotu (fluvisols), were collected and installed in a field lysimeter facility in Central China under irrigated vegetable production conditions. Urea fertilizer was applied at 650 kg N ha{sup -1}, and DCD was applied at 10 kg ha{sup -1} to the lysimeters planted with three kinds of vegetables (capsicum, Capsicum annuum L.; amaranth, Amaranthus mangostanus L.; radish, Raphanus sativus L.). The results showed that DCD reduced NO3- leaching by 58.5% and 36.2% and N{sub 2}O emissions factor by 83.8% and 72.7% in the two soils. The average NO{sub 3}{sup -}-N concentration in the drainage water was decreased from 4.9 mg NL{sup -1} to 2.3 mg NL{sup -1} and from 4.4 mg NL{sup -1} to 3.3 mg NL{sup -1}, in the Huangzongrang and Chaotu soils, respectively. In addition to the environmental benefits, the use of DCD also increased the yields of capsicum and radish in alfisol soil significantly (P < 0.01); only the amaranth yield in fluvisol soil was declined (P < 0.01), and the other vegetables yields were not affected. Total N concentrations of the three vegetables were increased significantly (P < 0.01) with the application of DCD with urea compared with urea alone. These results showed that the nitrification inhibitor DCD has the potential to significantly reduce NO{sub 3}{sup -} leaching and N{sub 2}O emissions and to make vegetable farming more environmentally

Transformation-Dissolution Reactions Partially Explain Adverse Effects of Metallic Silver Nanoparticles to Soil Nitrification in Different Soils.

Science.gov (United States)

Bollyn, Jessica; Willaert, Bernd; Kerré, Bart; Moens, Claudia; Arijs, Katrien; Mertens, Jelle; Leverett, Dean; Oorts, Koen; Smolders, Erik

2018-04-25

Risk assessment of metallic nanoparticles (NP) is critically affected by the concern that toxicity goes beyond that of the metallic ion. This study addressed this concern for soils with silver (Ag)-NP using the Ag-sensitive nitrification assay. Three agricultural soils (A,B,C) were spiked with equivalent Ag doses of either Ag-NP (d = 13 nm) or AgNO 3 . Soil solution was isolated and monitored over 97 days with due attention to accurate Ag fractionation at low (∼10 µg L -1 ) Ag concentrations. Truly dissolved (soils decreased with reaction half-lives of 4 to 22 days depending on the soil, denoting important Ag-ageing reactions. In contrast, truly dissolved Ag in Ag-NP-amended soils first increased by dissolution and subsequently decreased by ageing; the concentration never exceeding that in the AgNO 3 -amended soils. The half-lives of Ag-NP transformation-dissolution were about 4 days (soils A&B) and 36 days (soil C). The Ag toxic thresholds (EC10, mg Ag kg -1 soil) of nitrification, either evaluated at 21 or 35 days after spiking, were similar between the two Ag forms (soils A&B) but were factors 3 to 8 lower for AgNO 3 than for Ag-NP (soil C), largely corroborating with dissolution differences. This fate and bio-assay showed that Ag-NPs are not more toxic than AgNO 3 at equivalent total soil Ag concentrations and that differences in Ag-dissolution at least partially explain toxicity differences between the forms and among soils. This article is protected by copyright. All rights reserved. This article is protected by copyright. All rights reserved.

Waste Water Treatment Unit

International Nuclear Information System (INIS)

Ramadan, A.E.K.

2004-01-01

A wastewater treatment plant to treat both the sanitary and industrial effluent originated from process, utilities and off site units of the refinery is described. The purpose is to obtain at the end of the treatment plant, a water quality that is in compliance with contractual requirements and relevant environmental regulations. first treatment (pretreatment). Primary de-oiling, Equalization, Neutralization, Secondary de-oiling. Second treatment (Biological), The mechanism of BOD removal, Biological flocculation, Nutrient requirements, Nitrification, De-nitrification, Effect of temperature, Effect of ph, Toxicity

Long-term studies in COD elimination and nitrification in an overcongested packed-bed reactor (biofilter); Langzeituntersuchungen zur CSB-Elimination und Nitrifikation in einem ueberstauten Festbettreaktor (Biofilter)

Energy Technology Data Exchange (ETDEWEB)

Engelhart, M.; Dichtl, N. [Technische Univ. Braunschweig (Germany). Inst. fuer Siedlungswasserwirtschaft

1999-07-01

On a semi-technical scale, two process combinations were tested for their suitability for COD elimination and nitrification in combination with an overcongested packed-bed reactor (biofilter). (orig.) [German] Im halbtechnischen Massstab wurden zwei Verfahrenskombinationen unter Einbeziehung eines ueberstauten Festbettreaktors (Biofilter) auf ihre Tauglichkeit zur CSB-Elimination und Nitrifikation untersucht. (orig.)

The role of non-CRF inhibition in contour detection

NARCIS (Netherlands)

Grigorescu, C.; Petkov, N.; Westenberg, M.A.

2003-01-01

We propose a biologically motivated computational step, called non-classical receptive field (non-CRF) inhibition, to improve the performance of contour detectors. Non-CRF inhibition is exhibited by 80% of the orientation selective neurons in the primary visual cortex of macaque monkeys and has been

Cooperation for Better Inhibiting.

Science.gov (United States)

Novoa, Eva Maria; Ribas de Pouplana, Lluís

2015-06-18

Cladosporin is an antimalarial drug that acts as an ATP-mimetic to selectively inhibit Plasmodium lysyl-tRNA synthetase. Using multiple crystal structures, Fang et al. (2015) reveal in this issue of Chemistry & Biology the fascinating mechanism responsible for cladosporin selectivity. Copyright © 2015 Elsevier Ltd. All rights reserved.

Potential for Nitrogen Fixation and Nitrification in the Granite-Hosted Subsurface at Henderson Mine, CO

Science.gov (United States)

Swanner, Elizabeth D.; Templeton, Alexis S.

2011-01-01

The existence of life in the deep terrestrial subsurface is established, yet few studies have investigated the origin of nitrogen that supports deep life. Previously, 16S rRNA gene surveys cataloged a diverse microbial community in subsurface fluids draining from boreholes 3000 feet deep at Henderson Mine, CO, USA (Sahl et al., 2008). The prior characterization of the fluid chemistry and microbial community forms the basis for the further investigation here of the source of NH4+. The reported fluid chemistry included N2, NH4+ (5–112 μM), NO2− (27–48 μM), and NO3− (17–72 μM). In this study, the correlation between low NH4+ concentrations in dominantly meteoric fluids and higher NH4+ in rock-reacted fluids is used to hypothesize that NH4+ is sourced from NH4+-bearing biotite. However, biotite samples from the host rocks and ore-body minerals were analyzed by Fourier transform infrared (FTIR) microscopy and none-contained NH4+. However, the nitrogenase-encoding gene nifH was successfully amplified from DNA of the fluid sample with high NH4+, suggesting that subsurface microbes have the capability to fix N2. If so, unregulated nitrogen fixation may account for the relatively high NH4+ concentrations in the fluids. Additionally, the amoA and nxrB genes for archaeal ammonium monooxygenase and nitrite oxidoreductase, respectively, were amplified from the high NH4+ fluid DNA, while bacterial amoA genes were not. Putative nitrifying organisms are closely related to ammonium-oxidizing Crenarchaeota and nitrite-oxidizing Nitrospira detected in other subsurface sites based upon 16S rRNA sequence analysis. Thermodynamic calculations underscore the importance of NH4+ as an energy source in a subsurface nitrification pathway. These results suggest that the subsurface microbial community at Henderson is adapted to the low nutrient and energy environment by their capability of fixing nitrogen, and that fixed nitrogen may support subsurface biomass via

The nitrogen isotope effect of benthic remineralization-nitrification-denitrification coupling in an estuarine environment

Directory of Open Access Journals (Sweden)

M. Alkhatib

2012-05-01

Full Text Available The nitrogen (N stable isotopic composition of pore water nitrate and total dissolved N (TDN was measured in sediments of the St. Lawrence Estuary and the Gulf of St. Lawrence. The study area is characterized by gradients in organic matter reactivity, bottom water oxygen concentrations, as well as benthic respiration rates. N isotope effects on the water column associated with the benthic exchange of nitrate (ε_app and TDN (ε_sed during benthic nitrification-denitrification coupling were investigated. The sediments were a major sink for nitrate and a source of reduced dissolved N (RDN = DON + NH₄⁺. We observed that both the pore water nitrate and RDN pools were enriched in ¹⁵N relative to the water column, with increasing δ¹⁵N downcore in the sediments. As in other marine environments, the biological nitrate isotope fractionation of net fixed N loss was barely expressed at the scale of sediment-water exchange, with ϵ_app values <3‰. The strongest under-expression (i.e. lowest ε_app of the biological N isotope fractionation was observed at the most oxygenated sites with the least reactive organic matter, indicating that, through their control on the depth of the denitrification zone, bottom water oxygen concentrations and the organic matter reactivity can modulate ε_app. For the first time, actual measurements of δ¹⁵N of pore water RDN were included in the calculations of ε_sed. We argue that large fractions of the sea-floor-derived DON are reactive and, hence, involved in the development of the δ¹⁵N of dissolved inorganic N (DIN in the water column. In the St. Lawrence sediments, the combined benthic N transformations yield a flux of ¹⁵N-enriched RDN that can significantly elevate ε_sed above ε_app. Calculated ε_sed values were within the range of 4.6 ± 2�

Engineering hyporheic zones to target nitrification versus denitrification: performance data from constructed stream flumes

Science.gov (United States)

Herzog, S.; Portmann, A. C.; Halpin, B. N.; Higgins, C.; McCray, J. E.

2017-12-01

Nonpoint source nitrogen pollution from agricultural and urban runoff is one of the leading causes of impairment to US rivers and streams. The hyporheic zone (HZ) offers a natural biogeochemical hotspot for the attenuation of nitrogen within streams, thereby complementing efforts to prevent aquatic nitrogen pollution in the first place. However, HZ in urban and agricultural streams are often degraded by scouring and colmation, which limit their potential to improve stream water quality at the reach scale. A recent effort to mitigate nitrogen pollution in the Chesapeake Bay region provides denitrification credits for hyporheic restoration projects. Unfortunately, many of the featured hyporheic zone best management practices (BMP) (e.g., weirs, cross-vanes) tend to create only localized, aerobic hyporheic flows that are not optimal for the anaerobic denitrification reaction. In short, practitioners lack an adaptable BMP that can both 1) increase hyporheic exchange, and 2) tailor HZ residence times to match reactions of interest. Here we present new performance data for an HZ engineering technique called Biohydrochemical Enhancements for Streamwater Treatment (BEST). BEST are subsurface modules that utilize low-permeability sediments to drive efficient hyporheic exchange and control residence times, along with reactive geomedia to increase reaction rates within HZ sediments. This research utilized two artificial stream flumes: One flume served as an all-sand control condition, the other featured BEST modules at 1m spacing with a mixture of 70/30 sand/woodchips (v/v). Two different BEST media were tested: a coarse sand module with K 0.5 cm/s, and a fine sand module with K 0.15 cm/s. The flume with coarse sand BEST modules created aerobic HZ conditions and demonstrated rapid nitrification of ammonia at rates significantly higher than the control. However, denitrification was much slower and not significantly different between the two streams. In contrast, the fine sand

Azadirachtin interacts with retinoic acid receptors and inhibits retinoic acid-mediated biological responses.

Science.gov (United States)

Thoh, Maikho; Babajan, Banaganapalli; Raghavendra, Pongali B; Sureshkumar, Chitta; Manna, Sunil K

2011-02-11

Considering the role of retinoids in regulation of more than 500 genes involved in cell cycle and growth arrest, a detailed understanding of the mechanism and its regulation is useful for therapy. The extract of the medicinal plant Neem (Azadirachta indica) is used against several ailments especially for anti-inflammatory, anti-itching, spermicidal, anticancer, and insecticidal activities. In this report we prove the detailed mechanism on the regulation of retinoic acid-mediated cell signaling by azadirachtin, active components of neem extract. Azadirachtin repressed all trans-retinoic acid (ATRA)-mediated nuclear transcription factor κB (NF-κB) activation, not the DNA binding but the NF-κB-dependent gene expression. It did not inhibit IκBα degradation, IκBα kinase activity, or p65 phosphorylation and its nuclear translocation but inhibited NF-κB-dependent reporter gene expression. Azadirachtin inhibited TRAF6-mediated, but not TRAF2-mediated NF-κB activation. It inhibited ATRA-induced Sp1 and CREB (cAMP-response element-binding protein) DNA binding. Azadirachtin inhibited ATRA binding with retinoid receptors, which is supported by biochemical and in silico evidences. Azadirachtin showed strong interaction with retinoid receptors. It suppressed ATRA-mediated removal of retinoid receptors, bound with DNA by inhibiting ATRA binding to its receptors. Overall, our data suggest that azadirachtin interacts with retinoic acid receptors and suppresses ATRA binding, inhibits falling off the receptors, and activates transcription factors like CREB, Sp1, NF-κB, etc. Thus, azadirachtin exerts anti-inflammatory and anti-metastatic responses by a novel pathway that would be beneficial for further anti-inflammatory and anti-cancer therapies.

Azadirachtin Interacts with Retinoic Acid Receptors and Inhibits Retinoic Acid-mediated Biological Responses*

Science.gov (United States)

Thoh, Maikho; Babajan, Banaganapalli; Raghavendra, Pongali B.; Sureshkumar, Chitta; Manna, Sunil K.

2011-01-01

Considering the role of retinoids in regulation of more than 500 genes involved in cell cycle and growth arrest, a detailed understanding of the mechanism and its regulation is useful for therapy. The extract of the medicinal plant Neem (Azadirachta indica) is used against several ailments especially for anti-inflammatory, anti-itching, spermicidal, anticancer, and insecticidal activities. In this report we prove the detailed mechanism on the regulation of retinoic acid-mediated cell signaling by azadirachtin, active components of neem extract. Azadirachtin repressed all trans-retinoic acid (ATRA)-mediated nuclear transcription factor κB (NF-κB) activation, not the DNA binding but the NF-κB-dependent gene expression. It did not inhibit IκBα degradation, IκBα kinase activity, or p65 phosphorylation and its nuclear translocation but inhibited NF-κB-dependent reporter gene expression. Azadirachtin inhibited TRAF6-mediated, but not TRAF2-mediated NF-κB activation. It inhibited ATRA-induced Sp1 and CREB (cAMP-response element-binding protein) DNA binding. Azadirachtin inhibited ATRA binding with retinoid receptors, which is supported by biochemical and in silico evidences. Azadirachtin showed strong interaction with retinoid receptors. It suppressed ATRA-mediated removal of retinoid receptors, bound with DNA by inhibiting ATRA binding to its receptors. Overall, our data suggest that azadirachtin interacts with retinoic acid receptors and suppresses ATRA binding, inhibits falling off the receptors, and activates transcription factors like CREB, Sp1, NF-κB, etc. Thus, azadirachtin exerts anti-inflammatory and anti-metastatic responses by a novel pathway that would be beneficial for further anti-inflammatory and anti-cancer therapies. PMID:21127062

Discussion of the applicability of overdammed fixed-bed reactors in nitrification processes; Beitrag zum Einsatz von ueberstauten Festbettreaktoren zur Nitrifikation

Energy Technology Data Exchange (ETDEWEB)

Guenter, H.O.

1996-12-31

The investigation aimed at developing a dimensioning method for overdammed fixed bed nitrification reactors with plug flow which takes account of the reactor height. Further, information was to be obtained for assessing sudden loads and for comparing energy consumption with the data of conventional activated sludge plants. (orig./SR) [Deutsch] Ziel dieser Arbeit ist es, fuer ueberstaute, pfropfendurchstroemte Festbettreaktoren zur Nitrifikation einen Bemessungsansatz aufzustellen, welcher den Einfluss der Reaktorhoehe mit beruecksichtigt. Ferner sollten Erkenntnisse zur Beurteilung von Stossbelastungen sowie zum Energiebedarf im Vergleich zu herkoemmlichen Belebungsanlagen gewonnen werden. (orig./SR)

Nitrification in trickling filters applied to the post-treatment of effluents from UASB reactor: correlation between ammonia removal and the relative abundance of nitrifying bacteria

International Nuclear Information System (INIS)

Missagia, B. S.; Almeida, P. G. S. de; Silva, S. Q.; Chernicharo, C. A. L.

2009-01-01

The number and physiological activity of nitrifying bacteria in wastewater treatment reactors are considered the ratelimiting parameters for the bioconversion of nitrogen in sewage. Since the presence of ammonia and nitrite oxidizers can be correlated with their activity. In situ probe counts can be correlated with the nitrification rates in order to compare the efficiency of different media types. (Author)

Nitrification in trickling filters applied to the post-treatment of effluents from UASB reactor: correlation between ammonia removal and the relative abundance of nitrifying bacteria

Energy Technology Data Exchange (ETDEWEB)

Missagia, B. S.; Almeida, P. G. S. de; Silva, S. Q.; Chernicharo, C. A. L.

2009-07-01

The number and physiological activity of nitrifying bacteria in wastewater treatment reactors are considered the ratelimiting parameters for the bioconversion of nitrogen in sewage. Since the presence of ammonia and nitrite oxidizers can be correlated with their activity. In situ probe counts can be correlated with the nitrification rates in order to compare the efficiency of different media types. (Author)

Decentralized wastewater treatment using passively aerated biological filter.

Science.gov (United States)

Abou-Elela, Sohair I; Hellal, Mohamed S; Aly, Olfat H; Abo-Elenin, Salah A

2017-10-13

This study aimed to evaluate the efficiency of a novel pilot-scale passively aerated biological filter (PABF) as a low energy consumption system for the treatment of municipal wastewater. It consists of four similar compartments, each containing 40% of a non-woven polyester fabric as a bio-bed. The PABF was fed with primary treated wastewater under a hydraulic retention time (HRT) of 3.5 hr and a hydraulic loading rate of 5.5 m 2 /m 3 /d. The effect of media depth, HRT, dissolved oxygen (DO) and surface area of the media on the removal efficiency of pollutants was investigated. Results indicated that increasing media depth along the axis of the reactor and consequently increasing the HRT and DO resulted in great removal of different pollutants. A significant increase in the DO levels in the final effluent up to 6.7 mg/l resulted in good nitrification processes. Statistical analysis using SPSS showed that the reactor performance has significant removal efficiency (p filter systems.

Solid separation and sbr biological process for pig slurry treatment; Depuracion de purines por separacion de solidos y tratamiento biologico en SBR

Energy Technology Data Exchange (ETDEWEB)

Lekuona, A.; Alberdi, M.; Lekue, I.; Lasuen, M.

2009-07-01

Egiluze treatment plant in Renteria (Gipuzkoa, spain), has treated around 45 m{sup 3}/day of pig slurry since 2006. During this two years, the plant has been running in order to get a suitable effluent, which fulfills the corresponding parameters to be discharged to municipal drain. The treatment process consists basically of a first solid separation and subsequent nitrification-de-nitrificacion biological process using a Sequencing Batch Reactor (SBR). The technical and economic results showed in this article, prove that the process used in Egiluze treatment plant is an effective solution which allows the treatment of pig slurry in an economical and automated way. (Author)

Comparison of the Effects of Phenylhydrazine Hydrochloride and Dicyandiamide on Ammonia-Oxidizing Bacteria and Archaea in Andosols

Directory of Open Access Journals (Sweden)

Wenjie Yang

2017-11-01

Full Text Available Dicyandiamide, a routinely used commercial nitrification inhibitor (NI, inhibits ammonia oxidation catalyzed by ammonia monooxygenase (AMO. Phenylhydrazine hydrochloride has shown considerable potential for the development of next-generation NIs targeting hydroxylamine dehydrogenase (HAO. The effects of the AMO inhibitor and the HAO inhibitor on ammonia-oxidizing bacteria (AOB and ammonia-oxidizing archaea (AOA present in agricultural soils have not been compared thus far. In the present study, the effects of the two inhibitors on soil nitrification and the abundance of AOA and AOB as well as their community structure were investigated in a soil microcosm using quantitative polymerase chain reaction and pyrosequencing. The net nitrification rates and the growth of AOA and AOB in this soil microcosm were inhibited by both NIs. Both NIs had limited effect on the community structure of AOB and no effect on that of AOA in this soil microcosm. The effects of phenylhydrazine hydrochloride were similar to those of dicyandiamide. These results indicated that organohydrazine-based NIs have potential for the development of next-generation NIs targeting HAO in the future.

Full-scale implementation of external nitrification biological nutrient ...

African Journals Online (AJOL)

driniev

scale at the Daspoort Waste Water Treatment Works (DWWTW) in Central Pretoria, South Africa. This paper describes ..... 250 m3, with the balance of Compartment 1 as anaerobic (Fig. 2). .... cantly higher than the 140 ml/gTSS rec- ommended ...

Environmental factors affecting rates of nitrogen cycling

International Nuclear Information System (INIS)

Lipschultz, F.

1984-01-01

The nitrogen cycle in the eutrophic Delaware river was studied in late summer, 1983 using 15 N tracer additions of NHG 4 + , NO 2 - , and NO 3 - . Rates for nine different transformations were calculated simultaneously with a least-squares minimization analysis. Light was found to stimulate ammonium uptake and to inhibit ammonium oxidation. Rates for nitrification, ammonium uptake by phytoplankton, and photosynthesis were integrated over 24 hours and river depth. High turbidity lifted the effect of light inhibition on nitrification and restricted phytoplankton uptake. Uptake of ammonium contributed over 95% of the inorganic nitrogen ration for phytoplankton, with dark uptake accounting for more than 50%. A mass-conservation, box model of river was used to calculate rate constants required to reproduce observed nutrient concentration changes. The calculated constants correlated well with the measured 15 N and oxygen integrated rates. Water-column nitrification was the major loss term for NH 4 + , while water column regeneration was the primary source. Loss of oxidized nitrogen was insignificant. Oxygen consumption and air-water exchange far exceeded net photosynthetic oxygen production. Nitrification contributed less than 1% to the oxygen demand near Philadelphia but up to 25% further downstream. Production of NO and N 2 O was measured under varying oxygen concentrations in batch cultures of the nitrifying bacteria Nitrosomonas europaea and Nitrosococcus oceanus. Production of both gases increased relative to nitrite production as oxygen levels decreased

Toxicity of silver nanoparticles in biological systems: Does the complexity of biological systems matter?

Science.gov (United States)

Vazquez-Muñoz, Roberto; Borrego, Belen; Juárez-Moreno, Karla; García-García, Maritza; Mota Morales, Josué D; Bogdanchikova, Nina; Huerta-Saquero, Alejandro

2017-07-05

Currently, nanomaterials are more frequently in our daily life, specifically in biomedicine, electronics, food, textiles and catalysis just to name a few. Although nanomaterials provide many benefits, recently their toxicity profiles have begun to be explored. In this work, the toxic effects of silver nanoparticles (35nm-average diameter and Polyvinyl-Pyrrolidone-coated) on biological systems of different levels of complexity was assessed in a comprehensive and comparatively way, through a variety of viability and toxicological assays. The studied organisms included viruses, bacteria, microalgae, fungi, animal and human cells (including cancer cell lines). It was found that biological systems of different taxonomical groups are inhibited at concentrations of silver nanoparticles within the same order of magnitude. Thus, the toxicity of nanomaterials on biological/living systems, constrained by their complexity, e.g. taxonomic groups, resulted contrary to the expected. The fact that cells and virus are inhibited with a concentration of silver nanoparticles within the same order of magnitude could be explained considering that silver nanoparticles affects very primitive cellular mechanisms by interacting with fundamental structures for cells and virus alike. Copyright © 2017 Elsevier B.V. All rights reserved.

Poxvirus-encoded TNF decoy receptors inhibit the biological activity of transmembrane TNF.

Science.gov (United States)

Pontejo, Sergio M; Alejo, Ali; Alcami, Antonio

2015-10-01

Poxviruses encode up to four different soluble TNF receptors, named cytokine response modifier B (CrmB), CrmC, CrmD and CrmE. These proteins mimic the extracellular domain of the cellular TNF receptors to bind and inhibit the activity of TNF and, in some cases, other TNF superfamily ligands. Most of these ligands are released after the enzymic cleavage of a membrane precursor. However, transmembrane TNF (tmTNF) is not only a precursor of soluble TNF but also exerts specific pro-inflammatory and immunological activities. Here, we report that viral TNF receptors bound and inhibited tmTNF and describe some interesting differences in their activity against the soluble cytokine. Thus, CrmE, which does not inhibit mouse soluble TNF, could block murine tmTNF-induced cytotoxicity. We propose that this anti-tmTNF effect should be taken into consideration when assessing the role of viral TNF decoy receptors in the pathogenesis of poxvirus.

Cardiovascular toxicities of biological therapies

DEFF Research Database (Denmark)

Ryberg, Marianne

2013-01-01

The development of biological therapy is based on growing knowledge regarding the molecular changes required in cells for the development and progression of cancer to occur. Molecular targeted therapy is designed to inhibit the major molecular pathways identified as essential for a specific...

Effects of dissolved oxygen and pH on nitrous oxide production rates in autotrophic partial nitrification granules.

Science.gov (United States)

Rathnayake, Rathnayake M L D; Oshiki, Mamoru; Ishii, Satoshi; Segawa, Takahiro; Satoh, Hisashi; Okabe, Satoshi

2015-12-01

The effects of dissolved oxygen (DO) and pH on nitrous oxide (N2O) production rates and pathways in autotrophic partial nitrification (PN) granules were investigated at the granular level. N2O was primarily produced by betaproteobacterial ammonia-oxidizing bacteria, mainly Nitrosomonas europaea, in the oxic surface layer (production increased with increasing bulk DO concentration owing to activation of the ammonia (i.e., hydroxylamine) oxidation in this layer. The highest N2O emissions were observed at pH 7.5, although the ammonia oxidation rate was unchanged between pH 6.5 and 8.5. Overall, the results of this study suggest that in situ analyses of PN granules are essential to gaining insight into N2O emission mechanisms in a granule. Copyright © 2015 Elsevier Ltd. All rights reserved.

Toxicity of TiO2 nanoparticles on soil nitrification at environmentally relevant concentrations: Lack of classical dose-response relationships.

Science.gov (United States)

Simonin, Marie; Martins, Jean M F; Le Roux, Xavier; Uzu, Gaëlle; Calas, Aude; Richaume, Agnès

2017-03-01

Titanium-dioxide nanoparticles (TiO 2 -NPs) are increasingly released in agricultural soils through, e.g. biosolids, irrigation or nanoagrochemicals. Soils are submitted to a wide range of concentrations of TiO 2 -NPs depending on the type of exposure. However, most studies have assessed the effects of unrealistically high concentrations, and the dose-response relationships are not well characterized for soil microbial communities. Here, using soil microcosms, we assessed the impact of TiO 2 -NPs at concentrations ranging from 0.05 to 500 mg kg -1  dry-soil, on the activity and abundance of ammonia-oxidizing archaea (AOA) and bacteria (AOB), and nitrite-oxidizing bacteria (Nitrobacter and Nitrospira). In addition, aggregation and oxidative potential of TiO 2 -NPs were measured in the spiking suspensions, as they can be important drivers of TiO 2 -NPs toxicity. After 90 days of exposure, non-classical dose-response relationships were observed for nitrifier abundance or activity, making threshold concentrations impossible to compute. Indeed, AOA abundance was reduced by 40% by TiO 2 -NPs whatever the concentration, while Nitrospira was never affected. Moreover, AOB and Nitrobacter abundances were decreased mainly at intermediate concentrations nitrification was reduced by 25% at the lowest (0.05 mg kg -1 ) and the highest (100 and 500 mg kg -1 ) TiO 2 -NPs concentrations. Path analyses indicated that TiO 2 -NPs affected nitrification through an effect on the specific activity of nitrifiers, in addition to indirect effects on nitrifier abundances. Altogether these results point out the need to include very low concentrations of NPs in soil toxicological studies, and the lack of relevance of classical dose-response tests and ecotoxicological dose metrics (EC50, IC50…) for TiO 2 -NPs impact on soil microorganisms.

Complete nitrogen removal from municipal wastewater via partial nitrification by appropriately alternating anoxic/aerobic conditions in a continuous plug-flow step feed process.

Science.gov (United States)

Ge, Shijian; Peng, Yongzhen; Qiu, Shuang; Zhu, Ao; Ren, Nanqi

2014-05-15

This study assessed the technical feasibility of removing nitrogen from municipal wastewater by partial nitrification (nitritation) in a continuous plug-flow step feed process. Nitrite in the effluent accumulated to over 81.5  ± 9.2% but disappeared with the transition of process operation from anoxic/oxic mode to the anaerobic/anoxic/oxic mode. Batch tests showed obvious ammonia oxidizing bacteria (AOB) stimulation (advanced ammonia oxidation rate) and nitrite (NOB) oxidizing bacteria inhibition (reduced nitrite oxidation rate) under transient anoxic conditions. Two main factors contributed to nitritation in this continuous plug-flow process: One was the alternating anoxic and oxic operational condition; the step feed strategy guaranteed timely denitrification in anoxic zones, allowing a reduction in energy supply (nitrite) to NOB. Fluorescence in Situ Hybridization and quantitative real-time polymerase chain reaction analysis indicated that NOB population gradually decreased to 1.0  ± 0.1% of the total bacterial population (dominant Nitrospira spp., 1.55 × 10(9) copies/L) while AOB increased approximately two-fold (7.4  ± 0.9%, 1.25 × 10(10) copies/L) during the above anoxic to anaerobic transition. Most importantly, without addition of external carbon sources, the above wastewater treatment process reached 86.0  ± 4.2% of total nitrogen (TN) removal with only 7.23 ± 2.31 mg/L of TN in the effluent, which met the discharge requirements. Copyright © 2014 Elsevier Ltd. All rights reserved.

In situ net N mineralisation and nitrification under organic and conventionally managed olive oil orchards

DEFF Research Database (Denmark)

Gomez Muñoz, Beatriz; Hinojosa, M. B.; García-Ruiz, R.

2015-01-01

Olive oil orchard occupies a great percentage of the cropland in southern Spain. Thus, changes in nitrogen (N) fertilization might have a great effect on N dynamics at least at regional scale, which should be investigated for a sustainable N fertilization program. In situ net N mineralization (NM......) and nitrification (NN) were investigated during a year in comparable organic (OR) and conventional (CV) olive oil orchards of two locations differing their N input. Soil samples were collected in two soil positions (under and between trees canopy) and both buried-bags and soil core techniques were used to quantify...... soil TN. Soil TN and PMN explained together a 50 % of the variability in soil N availability, which suggests that these two variables are good predictors of the potential of a soil to provide available N. The highest rates of soil N availability were found in spring, when olive tree demand for N...

Cellulase Inhibition by High Concentrations of Monosaccharides

DEFF Research Database (Denmark)

Hsieh, Chia-Wen; Cannella, David; Jørgensen, Henning

2014-01-01

Biological degradation of biomass on an industrial scale culminates in high concentrations of end products. It is known that the accumulation of glucose and cellobiose, end products of hydrolysis, inhibit cellulases and decrease glucose yields. Aside from these end products, however, other monosa...

Denitrification, nitrification, and atmospheric nitrous oxide

National Research Council Canada - National Science Library

Delwiche, C. C

1981-01-01

In this book, a number of unanswered questions particularly demanding of attention are analyzed to determine the significance of various chemical and biological processes involved with the atmospheric...

Downregulation of the expression of HDGF attenuates malignant biological behaviors of hilar cholangiocarcinoma cells.

Science.gov (United States)

Liu, Yanfeng; Sun, Jingxian; Yang, Guangyun; Liu, Zhaojian; Guo, Sen; Zhao, Rui; Xu, Kesen; Wu, Xiaopeng; Zhang, Zhaoyang

2015-09-01

Hepatoma-derived growth factor (HDGF) has been reported to be a potential predictive and prognostic marker for several types of cancer and important in malignant biological behaviors. However, its role in human hilar cholangiocarcinoma remains to be elucidated. Our previous study demonstrated that high expression levels of HDGF in hilar cholangiocarcinoma tissues correlates with tumor progression and patient outcome. The present study aimed to elucidate the detailed functions of the HDGF protein. This was performed by downregulating the protein expression of HDGF in the FRH0201 hilar cholangiocarcinoma cell line by RNA interference (RNAi) in vitro, and revealed that downregulation of the HDGF protein significantly inhibited the malignant biological behavior of the FRH0201 cells. In addition, further investigation revealed that downregulation of the protein expression of HDGF significantly decreased the secretion of vascular endothelial growth factor, which may be the mechanism partially responsible for the inhibition of malignant biological behaviors. These findings demonstrated that HDGF is important in promoting malignant biological behaviors, including proliferation, migration and invasion of hilar cholangiocarcinoma FRH0201 cells. Inhibition of the expression of HDGF downregulated the malignant biological behaviors, suggesting that downregulation of the protein expression of HDGF by RNAi may be a novel therapeutic approach to inhibit the progression of hilar cholangiocarcinoma.

Inhibition of hydrogen sulfide generation from disposed gypsum drywall using chemical inhibitors

Energy Technology Data Exchange (ETDEWEB)

Xu Qiyong [Department of Environmental Engineering Sciences, University of Florida, Gainesville, FL 32611 (United States); School of Environment and Energy, Shenzhen Graduate School of Peking University, 518055, (China); Townsend, Timothy, E-mail: ttown@ufl.edu [Department of Environmental Engineering Sciences, University of Florida, Gainesville, FL 32611 (United States); Bitton, Gabriel [Department of Environmental Engineering Sciences, University of Florida, Gainesville, FL 32611 (United States)

2011-07-15

Disposal of gypsum drywall in landfills has been demonstrated to elevate hydrogen sulfide (H{sub 2}S) concentrations in landfill gas, a problem with respect to odor, worker safety, and deleterious effect on gas-to-energy systems. Since H{sub 2}S production in landfills results from biological activity, the concept of inhibiting H{sub 2}S production through the application of chemical agents to drywall during disposal was studied. Three possible inhibition agents - sodium molybdate (Na{sub 2}MoO{sub 4}), ferric chloride (FeCl{sub 3}), and hydrated lime (Ca(OH){sub 2}) - were evaluated using flask and column experiments. All three agents inhibited H{sub 2}S generation, with Na{sub 2}MoO{sub 4} reducing H{sub 2}S generation by interrupting the biological sulfate reduction process and Ca(OH){sub 2} providing an unfavorable pH for biological growth. Although FeCl{sub 3} was intended to provide an electron acceptor for a competing group of bacteria, the mechanism found responsible for inhibiting H{sub 2}S production in the column experiment was a reduction in pH. Application of both Na{sub 2}MoO{sub 4} and FeCl{sub 3} inhibited H{sub 2}S generation over a long period (over 180 days), but the impact of Ca(OH){sub 2} decreased with time as the alkalinity it contributed was neutralized by the generated H{sub 2}S. Practical application and potential environmental implications need additional exploration.

Lack of Evolution Acceptance Inhibits Students' Negotiation of Biology-Based Socioscientific Issues

Science.gov (United States)

Fowler, S. R.; Zeidler, D. L.

2016-01-01

The purpose of this study was to explore science content used during college students' negotiation of biology-based socioscientific issues (SSI) and examine how it related to students' conceptual understanding and acceptance of biological evolution. The Socioscientific Issues Questionnaire (SSI-Q) was developed to measure depth of evolutionary…

Inhibition of Alkaline Flocculation by Algal Organic Matter for Chlorella vulgaris

Energy Technology Data Exchange (ETDEWEB)

Vandamme, Dries; Beuckels, Annelies; Vadelius, Eric; Depraetere, Orily; Noppe, Wim; Dutta, Abhishek; Foubert, Imogen; Laurens, Lieve; Muylaert, Koenraad

2016-01-01

Alkaline flocculation is a promising strategy for the concentration of microalgae for bulk biomass production. However, previous studies have shown that biological changes during the cultivation negatively affect flocculation efficiency. The influence of changes in cell properties and in the quality and composition of algal organic matter (AOM) were studied using Chlorella vulgaris as a model species. In batch cultivation, flocculation was increasingly inhibited over time and mainly influenced by changes in medium composition, rather than biological changes at the cell surface. Total carbohydrate content of the organic matter fraction sized bigger than 3 kDa increased over time and this fraction was shown to be mainly responsible for the inhibition of alkaline flocculation. The monosaccharide identification of this fraction mainly showed the presence of neutral and anionic monosaccharides. An addition of 30–50 mg L^-1 alginic acid, as a model for anionic carbohydrate polymers containing uronic acids, resulted in a complete inhibition of flocculation. Furthermore, these results suggest that inhibition of alkaline flocculation was caused by interaction of anionic polysaccharides leading to an increased flocculant demand over time.

Contaminants of emerging concern in tributaries to the Laurentian Great Lakes: II. Biological consequences of exposure

Science.gov (United States)

Thomas, Linnea M.; Jorgenson, Zachary G.; Brigham, Mark E.; Choy, Steven J.; Moore, Jeremy N.; Banda, Jo A.; Gefell, D.J.; Minarik, Thomas A.; Schoenfuss, Heiko L.

2017-01-01

The Laurentian Great Lakes contain one fifth of the world’s surface freshwater and have been impacted by human activity since the Industrial Revolution. In addition to legacy contaminants, nitrification and invasive species, this aquatic ecosystem is also the recipient of Contaminants of Emerging Concern (CECs) with poorly understood biological consequences. In the current study, we documented the presence, concentrations, and biological effects of CECs across 27 field sites in six Great Lakes tributaries by examining over 2250 resident and caged sunfish (Lepomis ssp.) for a variety of morphological and physiological endpoints and related these results to CEC occurrence. CEC were ubiquitous across studies sites and their presence and concentrations in water and sediment were highest in effluent dominated rivers and downstream of municipal wastewater treatment plant discharges. However, even putative upstream reference sites were not free of CEC presence and fish at these sites exhibited biological effects consistent with CEC exposure. Only the Fox River exhibited consistent adverse biological effects, including increased relative liver size, greater prominence of hepatocyte vacuoles and increased plasma glucose concentrations. Canonical Redundancy Analysis revealed consistent patterns of biological consequences of CEC exposure across all six tributaries. Increasing plasma glucose concentrations, likely as a result of pollutant-induced metabolic stress, were associated with increased relative liver size and greater prominence of hepatocyte vacuoles. These indicators of pollutant exposure were inversely correlated with indicators of reproductive potential including smaller gonad size and less mature gametes. The current study highlights the need for greater integration of chemical and biological studies and suggests that CECs in the Laurentian Great Lakes Basin may adversely affect the reproductive potential of exposed fish populations.

Biological activities of xanthatin from Xanthium strumarium leaves.

Science.gov (United States)

Nibret, Endalkachew; Youns, Mahamoud; Krauth-Siegel, R Luise; Wink, Michael

2011-12-01

The objective of the present work was to evaluate the biological activities of the major bioactive compound, xanthatin, and other compounds from Xanthium strumarium (Asteraceae) leaves. Inhibition of bloodstream forms of Trypanosoma brucei brucei and leukaemia HL-60 cell proliferation was assessed using resazurin as a vital stain. Xanthatin was found to be the major and most active compound against T. b. brucei with an IC(50) value of 2.63 µg/mL and a selectivity index of 20. The possible mode of action of xanthatin was further evaluated. Xanthatin showed antiinflammatory activity by inhibiting both PGE(2) synthesis (24% inhibition) and 5-lipoxygenase activity (92% inhibition) at concentrations of 100 µg/mL and 97 µg/mL, respectively. Xanthatin exhibited weak irreversible inhibition of parasite specific trypanothione reductase. Unlike xanthatin, diminazene aceturate and ethidium bromide showed strong DNA intercalation with IC(50) values of 26.04 µg/mL and 44.70 µg/mL, respectively. Substantial induction of caspase 3/7 activity in MIA PaCa-2 cells was observed after 6 h of treatment with 100 µg/mL of xanthatin. All these data taken together suggest that xanthatin exerts its biological activity by inducing apoptosis and inhibiting both PGE(2) synthesis and 5-lipoxygenase activity thereby avoiding unwanted inflammation commonly observed in diseases such as trypanosomiasis. Copyright © 2011 John Wiley & Sons, Ltd.

Inhibition of prenylated KRAS in a lipid environment.

Directory of Open Access Journals (Sweden)

Johanna M Jansen

Full Text Available RAS mutations lead to a constitutively active oncogenic protein that signals through multiple effector pathways. In this chemical biology study, we describe a novel coupled biochemical assay that measures activation of the effector BRAF by prenylated KRASG12V in a lipid-dependent manner. Using this assay, we discovered compounds that block biochemical and cellular functions of KRASG12V with low single-digit micromolar potency. We characterized the structural basis for inhibition using NMR methods and showed that the compounds stabilized the inactive conformation of KRASG12V. Determination of the biophysical affinity of binding using biolayer interferometry demonstrated that the potency of inhibition matches the affinity of binding only when KRAS is in its native state, namely post-translationally modified and in a lipid environment. The assays we describe here provide a first-time alignment across biochemical, biophysical, and cellular KRAS assays through incorporation of key physiological factors regulating RAS biology, namely a negatively charged lipid environment and prenylation, into the in vitro assays. These assays and the ligands we discovered are valuable tools for further study of KRAS inhibition and drug discovery.

Advances in wastewater nitrogen removal by biological processes: state of the art review

Directory of Open Access Journals (Sweden)

Andrea G. Capodaglio

2016-04-01

Full Text Available The paper summarizes the state-of-the-art of the most recent advances in biological nitrogen removal, including process design criteria and technological innovations. With reference to the Modified Ludzck Ettinger (MLE process (pre-denitrification and nitrification in the activated sludge process, the most common nitrogen removal process used nowadays, a new design equation for the denitrification reactor based on specific denitrification rate (SDNR has been proposed. In addition, factors influencing SDNR (DO in the anoxic reactor; hydrodynamic behavior are analyzed, and technological solutions are proposed. Concerning technological advances, the paper presents a summary of various “deammonification” processes, better known by their patent names like ANAMMOX®, DEMON®, CANON®, ANITA® and others. These processes have already found applications in the treatment of high-strength wastewater such as digested sludge liquor and landfill leachate. Among other emerging denitrification technologies, consideration is given to the Membrane Biofilm Reactors (MBfRs that can be operated both in oxidation and reduction mode.

Marine N2O Emissions From Nitrification and Denitrification Constrained by Modern Observations and Projected in Multimillennial Global Warming Simulations

Science.gov (United States)

Battaglia, G.; Joos, F.

2018-01-01

Nitrous oxide (N2O) is a potent greenhouse gas (GHG) and ozone destructing agent; yet global estimates of N2O emissions are uncertain. Marine N2O stems from nitrification and denitrification processes which depend on organic matter cycling and dissolved oxygen (O2). We introduce N2O as an obligate intermediate product of denitrification and as an O2-dependent by-product from nitrification in the Bern3D ocean model. A large model ensemble is used to probabilistically constrain modern and to project marine N2O production for a low (Representative Concentration Pathway (RCP)2.6) and high GHG (RCP8.5) scenario extended to A.D. 10,000. Water column N2O and surface ocean partial pressure N2O data serve as constraints in this Bayesian framework. The constrained median for modern N2O production is 4.5 (±1σ range: 3.0 to 6.1) Tg N yr-1, where 4.5% stems from denitrification. Modeled denitrification is 65.1 (40.9 to 91.6) Tg N yr-1, well within current estimates. For high GHG forcing, N2O production decreases by 7.7% over this century due to decreasing organic matter export and remineralization. Thereafter, production increases slowly by 21% due to widespread deoxygenation and high remineralization. Deoxygenation peaks in two millennia, and the global O2 inventory is reduced by a factor of 2 compared to today. Net denitrification is responsible for 7.8% of the long-term increase in N2O production. On millennial timescales, marine N2O emissions constitute a small, positive feedback to climate change. Our simulations reveal tight coupling between the marine carbon cycle, O2, N2O, and climate.

Experimental study of the biological properties of 188Re-Hepama-1 biologic superparamagnetic nanoparticles

International Nuclear Information System (INIS)

Feng Yanlin; Tan Jiaju; Sun Jing; Wen Guanghua; Wu Xiaolian; Liang Sheng; Xia Jiaoyun

2007-01-01

Objective: To investigate a new biologic-superparamagnetic nanoparticles's characteristics of immunological activity, biological distributing in vivo, targeting and inhibiting tumor effect. Methods: The experimental group 188 Re-Hepama-l-superparamagnetic nanoparticles, and control groups, including 188 ReO 4 - , 188 Re-Hepama-1, and 188 Re-superparamagnetic nanoparticles, were set up. The distributions were measured after injection 4 h and 24 h by caudal vein of Kuming mice. The magnetic targeting experiments in vivo were clone with and without magnetic field in liver after injection in New Zealand rabbit. The inhibiting tumor effect on hepatic cancer cell lines SMMC-7721 of the above four 188 Re labeled products were measured by mono nuclear cell direct cytotoxicity assay method. Results: After injection 4 h and 24 h by vein, the liver taking was highest in group 188 Re-Hepama-l-superparamagnetic nanoparticles. The radiative activity in liver in magnetism zoo was higher than in non magnetism zoo in 188 Re- Hepama-1-superparamagnetic nanoparticles after applying magnetic field in left lobe of liver, and the ratio of in magnetism zoo to non magnetism zoo was 1.87. And the half effective inhibition radioactive concentrations (IC 50 ) in 188 Re-Hepama-l-superparamagnetic nanoparticles was one forth of 188 ReO 4 - . Conclusion: 188 Re- Hepama-l-superparamagnetic nanoparticles showed its fine stability in intro, good immunological activity and significant liver target. (authors)

Nitrification-driven forms of nitrogen metabolism in microbial mat communities thriving along an ammonium-enriched subsurface geothermal stream

Science.gov (United States)

Nishizawa, Manabu; Koba, Keisuke; Makabe, Akiko; Yoshida, Naohiro; Kaneko, Masanori; Hirao, Shingo; Ishibashi, Jun-ichiro; Yamanaka, Toshiro; Shibuya, Takazo; Kikuchi, Tohru; Hirai, Miho; Miyazaki, Junichi; Nunoura, Takuro; Takai, Ken

2013-07-01

We report here the concurrence and interaction among forms of nitrogen metabolism in thermophilic microbial mat communities that developed in an ammonium-abundant subsurface geothermal stream. First, the physical and chemical conditions of the stream water at several representative microbial mat habitats (including upper, middle and downstream sites) were characterized. A thermodynamic calculation using these physical and chemical conditions predicted that nitrification consisting of ammonia and nitrite oxidations would provide one of the largest energy yields of chemolithotrophic metabolisms. Second, near-complete prokaryotic 16S rRNA gene clone analysis was conducted for representative microbial mat communities at the upper, middle and downstream sites. The results indicated a dynamic shift in the 16S rRNA gene phylotype composition through physical and chemical variations of the stream water. The predominant prokaryotic components varied from phylotypes related to hydrogeno (H2)- and thio (S)-trophic Aquificales, thermophilic methanotrophs and putative ammonia-oxidizing Archaea (AOA) located upstream (72 °C) to the phylotypes affiliated with putative AOA and nitrite-oxidizing bacteria (NOB) located at the middle and downstream sites (65 and 57 °C, respectively). In addition, the potential in situ metabolic activities of different forms of nitrogen metabolism were estimated through laboratory experiments using bulk microbial mat communities. Finally, the compositional and isotopic variation in nitrogen compounds was investigated in the stream water flowing over the microbial mats and in the interstitial water inside the mats. Although the stream water was characterized by a gradual decrease in the total ammonia concentration (ΣNH3: the sum of ammonia and ammonium concentrations) and a gradual increase in the total concentration of nitrite and nitrate (NO2- + NO3-), the total inorganic nitrogen concentration (TIN: the sum of ΣNH3, NO2- and NO3- concentrations

The history of aerobic ammonia oxidizers: from the first discoveries to today.

Science.gov (United States)

Monteiro, Maria; Séneca, Joana; Magalhães, Catarina

2014-07-01

Nitrification, the oxidation of ammonia to nitrite and nitrate, has long been considered a central biological process in the global nitrogen cycle, with its first description dated 133 years ago. Until 2005, bacteria were considered the only organisms capable of nitrification. However, the recent discovery of a chemoautotrophic ammonia-oxidizing archaeon, Nitrosopumilus maritimus, changed our concept of the range of organisms involved in nitrification, highlighting the importance of ammonia-oxidizing archaea (AOA) as potential players in global biogeochemical nitrogen transformations. The uniqueness of these archaea justified the creation of a novel archaeal phylum, Thaumarchaeota. These recent discoveries increased the global scientific interest within the microbial ecology society and have triggered an analysis of the importance of bacterial vs archaeal ammonia oxidation in a wide range of natural ecosystems. In this mini review we provide a chronological perspective of the current knowledge on the ammonia oxidation pathway of nitrification, based on the main physiological, ecological and genomic discoveries.

The Effects of Zebra Mussels on Nitrogen Cycling and Sediment Physiochemical Characteristics: A Laboratory Experiment.

Science.gov (United States)

Bruesewitz, D. A.; Tank, J. L.; Bernot, M. J.

2005-05-01

Many ecosystems experiencing anthropogenic nitrogen loading have also been invaded by zebra mussels (ZM), therefore it is important to understand how these human-induced changes interact. In particular, ZM may impact biogeochemical transformations. We hypothesized that high NH4+ waste from ZM will increase sediment nitrification rates, and increase NO3--N available for denitrification. To test this prediction, aquaria were stocked with either no ZM or 10,000 individuals m-2. Sediment nitrification (via nitrapyrin-inhibition technique), denitrification (via chloramphenicol-amended acetylene block technique), and sediment O2 profiles (using microelectrodes) were measured weekly for 1 month. The presence of ZM increased nitrification and denitrification rates over initial conditions throughout all weeks (RM ANOVA, p<0.05). Sediment nitrification in the ZM aquaria increased to 47 ± 2.1 μ g NH4+ -NgAFDM-1h-1 by the 3rd week in comparison to 24 ± 4.4 μ g NH4+ -NgAFDM-1h-1 in control aquaria. Sediment denitrification peaked at week 2 in the ZM aquaria at 330 ± 24 μ g N2O gAFDM-1h-1 but remained low in control aquaria throughout. There was a stronger correlation between nitrification and denitrification rates in the presence of ZM (R=0.32, 0.12 respectively). These results, in addition to more frequent hypoxia in sediment oxygen profiles, suggest closer coupling between nitrification and denitrification when ZM are present.

Depth investigation of rapid sand filters for drinking water production reveals strong stratification in nitrification biokinetic behavior

DEFF Research Database (Denmark)

Tatari, Karolina; Smets, Barth F.; Albrechtsen, Hans-Jørgen

2016-01-01

The biokinetic behavior of NH4 + removal was investigated at different depths of a rapid sand filter treating groundwater for drinking water preparation. Filter materials from the top, middle and bottom layers of a full-scale filter were exposed to various controlled NH4 + loadings in a continuous......-flow lab-scale assay. NH4 + removal capacity, estimated from short term loading up-shifts, was at least 10 times higher in the top than in the middle and bottom filter layers, consistent with the stratification of Ammonium Oxidizing Bacteria (AOB). AOB density increased consistently with the NH4 + removal...... rate, indicating their primarily role in nitrification under the imposed experimental conditions. The maximum AOB cell specific NH4 + removal rate observed at the bottom was at least 3 times lower compared to the top and middle layers. Additionally, a significant up-shift capacity (4.6 and 3.5 times...

Ammonia-oxidizing Bacteria and Archaea in the Rhizosphere of Freshwater Macrophytes

DEFF Research Database (Denmark)

Herrmann, Martina; Schramm, Andreas

2007-01-01

AMMONIA-OXIDIZING ARCHAEA AND BACTERIA IN THE RHIZOSPHERE OF FRESHWATER MACROPHYTES Martina Herrmann and Andreas Schramm Department of Biological Sciences, Microbiology, University of Aarhus, Denmark Aquatic macrophytes such as Littorella uniflora and Lobelia dortmanna release oxygen from...... their roots and thereby stimulate nitrification and coupled nitrification-denitrification in their rhizosphere. However, oxygen release and inorganic nitrogen concentrations differ markedly between macrophyte species. We therefore propose (i) that the rhizosphere of freshwater macrophytes harbours a species......-specific microbial community distinct from that of unvegetated sediment and (ii) that aquatic macrophytes have an impact on abundance and activity of nitrifying and denitrifying bacteria in freshwater sediment. The goal of this study was to test these hypotheses for the key functional group for coupled nitrification...

Inhibition of total oxygen uptake by silica nanoparticles in activated sludge

Energy Technology Data Exchange (ETDEWEB)

Sibag, Mark [Department of Environment and Energy, Sejong University, 98 Gunja-Dong, Gwangjin-Gu, Seoul 143-747 (Korea, Republic of); Choi, Byeong-Gyu [School of Civil, Environmental and Architectural Engineering, Korea University, 145, Anam-ro, Sungbuk-ku, Seoul 136-701 (Korea, Republic of); Suh, Changwon [Energy Lab, Environment Group, Samsung Advanced Institute of Technology, 130 Samsung-ro, Yeongtong-gu, Suwon-si, Gyeonggi-do 443-803 (Korea, Republic of); Lee, Kwan Hyung; Lee, Jae Woo [Department of Environmental Engineering and Program in Environmental Technology and Policy, Korea University, Sejong 339-700 (Korea, Republic of); Maeng, Sung Kyu [Department of Civil and Environmental Engineering, Sejong University, 98 Gunja-Dong, Gwangjin-Gu, Seoul 143-747 (Korea, Republic of); Cho, Jinwoo, E-mail: jinwoocho@sejong.edu [Department of Environment and Energy, Sejong University, 98 Gunja-Dong, Gwangjin-Gu, Seoul 143-747 (Korea, Republic of)

2015-02-11

Highlights: • Silica nanoparticles (SNP) inhibit total oxygen uptake in activated sludge. • Relatively smaller SNP are inhibitorier than larger SNP. • SNP alters C15:0, C16:0 and C18:0 in activated sludge fatty acid methyl ester profile. - Abstract: Nanoparticle toxicity to biological activities in activated sludge is largely unknown. Among the widely used nanoparticles, silica nanoparticles (SNP) have a limited number of studies associated with inhibition to the activated sludge process (ASP). We demonstrated SNP inhibition of activated sludge respiration through oxygen uptake rate (OUR) measurement. Based on the percentage inhibition of total oxygen consumption (I{sub T}), we observed that smaller SNPs (12 nm, I{sub T} = 33 ± 3%; 151 nm, I{sub T} = 23 ± 2%) were stronger inhibitors than larger SNPs (442 and 683 nm, I{sub T} = 5 ± 1%). Transmission electron micrographs showed that some of the SNPs were adsorbed on and/or apparently embedded somewhere in the microbial cell membrane. Whether SNPs are directly associated with the inhibition of total oxygen uptake warrants further studies. However, it is clear that SNPs statistically significantly altered the composition of microbial membrane lipids, which was more clearly described by principal component analysis and weighted Euclidian distance (PCA-ED) of the fatty acid methyl ester (FAME) data. This study suggests that SNPs potentially affect the biological activity in activated sludge through the inhibition of total oxygen uptake.

Influence of road salt on the biological removal of nitrogen

Directory of Open Access Journals (Sweden)

Eliška Horniaková

2007-10-01

Full Text Available Processes occuring in the aeration tank remove nitrogen from the organic substances in wastewater by using the bacterii. Nitrification utilize the metabolism of aerobic bacterii Nitrosomonas, Nitrococus, Nitrospira, Nitrobacter Nitrocystis a Nitrosobolus. Pseudosomonas, Chromobacterium, Denitrobacillus a Micrococus are denitrification anaerobic bacterii. The bacterii are lithotrophic and they are sensitive to pH of wastewater. Chlorine and heavy metals are toxic for these bacterii. For a correct grow, reproduction and metabolism, temperature above 10 ºC is needed but the ideal temperature is from 20 to 30 ºC. An intensive cold reduces or even stops the activity of bacterii.Cold road salt flow to a sewage and then to the aeration basin. Many of nitrification microorganisms dead because their cells lyse and their content flow into the tank. NaCl is toxic for bacterii. From aeration basin a high amount of N-NH4 flows out. The sludge may be a slightly flocculate and the effluent water may be turbid

Bioengineered Hydrogel to Inhibit Post-Traumatic Central Nervous System Scarring

Science.gov (United States)

2016-10-01

AWARD NUMBER: W81XWH-14-1-0586 TITLE: Bioengineered Hydrogel to Inhibit Post-Traumatic Central Nervous System Scarring PRINCIPAL...Hydrogel to Inhibit Post-Traumatic Central Nervous System Scarring 5a. CONTRACT NUMBER W81XWH-14-1-0586 5b. GRANT NUMBER W81XWH- 14-1-0586 5c...barriers that prevent the optimal delivery of biologics and cells to the injured nervous system . A significant problem is the formation of scar tissue

Transformation of ammonia i biological airfilters

DEFF Research Database (Denmark)

Nielsen, Lars Peter; Sørensen, Karen; Andersen, Mathias

2007-01-01

Ammonia is a major compound in ventilation air from animal houses. In biological filters it is with varying efficiency transformed by physical, biological, and chemical processes and ends up as ammonium, nitrate, and nitrite dissolved in water and as dinitrogen, nitrous oxide and nitric oxide...... emitted to the air. To identify the key regulators of these transformations we have combined data from studies of microbiology and performance in 10 experimental and full scale filters of varying design, loading, and management. Inhibition by nitrite controlled ammonium oxidation and pH, while biological...... removal without too much energy consumption, waste water production, green house gas emission, or suppression of the filters odor removal efficiency....

Biological nutrients removal from the supernatant originating from the anaerobic digestion of the organic fraction of municipal solid waste.

Science.gov (United States)

Malamis, S; Katsou, E; Di Fabio, S; Bolzonella, D; Fatone, F

2014-09-01

This study critically evaluates the biological processes and techniques applied to remove nitrogen and phosphorus from the anaerobic supernatant produced from the treatment of the organic fraction of municipal solid waste (OFMSW) and from its co-digestion with other biodegradable organic waste (BOW) streams. The wide application of anaerobic digestion for the treatment of several organic waste streams results in the production of high quantities of anaerobic effluents. Such effluents are characterized by high nutrient content, because organic and particulate nitrogen and phosphorus are hydrolyzed in the anaerobic digestion process. Consequently, adequate post-treatment is required in order to comply with the existing land application and discharge legislation in the European Union countries. This may include physicochemical and biological processes, with the latter being more advantageous due to their lower cost. Nitrogen removal is accomplished through the conventional nitrification/denitrification, nitritation/denitritation and the complete autotrophic nitrogen removal process; the latter is accomplished by nitritation coupled with the anoxic ammonium oxidation process. As anaerobic digestion effluents are characterized by low COD/TKN ratio, conventional denitrification/nitrification is not an attractive option; short-cut nitrogen removal processes are more promising. Both suspended and attached growth processes have been employed to treat the anaerobic supernatant. Specifically, the sequencing batch reactor, the membrane bioreactor, the conventional activated sludge and the moving bed biofilm reactor processes have been investigated. Physicochemical phosphorus removal via struvite precipitation has been extensively examined. Enhanced biological phosphorus removal from the anaerobic supernatant can take place through the sequencing anaerobic/aerobic process. More recently, denitrifying phosphorus removal via nitrite or nitrate has been explored. The removal of

Nitrification of archaeal ammonia oxidizers in a high- temperature hot spring

Science.gov (United States)

Chen, Shun; Peng, Xiaotong; Xu, Hengchao; Ta, Kaiwen

2016-04-01

The oxidation of ammonia by microbes has been shown to occur in diverse natural environments. However, the link of in situ nitrification activity to taxonomic identities of ammonia oxidizers in high-temperature environments remains poorly understood. Here, we studied in situ ammonia oxidation rates and the diversity of ammonia-oxidizing Archaea (AOA) in surface and bottom sediments at 77 °C in the Gongxiaoshe hot spring, Tengchong, Yunnan, China. The in situ ammonia oxidation rates measured by the 15N-NO3- pool dilution technique in the surface and bottom sediments were 4.80 and 5.30 nmol N g-1 h-1, respectively. Real-time quantitative polymerase chain reaction (qPCR) indicated that the archaeal 16S rRNA genes and amoA genes were present in the range of 0.128 to 1.96 × 108 and 2.75 to 9.80 × 105 gene copies g-1 sediment, respectively, while bacterial amoA was not detected. Phylogenetic analysis of 16S rRNA genes showed high sequence similarity to thermophilic Candidatus Nitrosocaldus yellowstonii, which represented the most abundant operational taxonomic units (OTU) in both surface and bottom sediments. The archaeal predominance was further supported by fluorescence in situ hybridization (FISH) visualization. The cell-specific rate of ammonia oxidation was estimated to range from 0.410 to 0.790 fmol N archaeal cell-1 h-1, higher than those in the two US Great Basin hot springs. These results suggest the importance of archaeal rather than bacterial ammonia oxidation in driving the nitrogen cycle in terrestrial geothermal environments.

The Full-Scale Implementation of an Innovative Biological Ammonia Treatment Process

Science.gov (United States)

Across the United States, high levels of ammonia in drinking water sources can be found, including small communities like Palo, Iowa (approximate population of 1,026). Although ammonia in water does not pose a direct health concern, ammonia nitrification can cause a number of iss...

Nitrogen transformation of reclaimed wastewater in a pipeline by oxygen injection.

Science.gov (United States)

Rodríguez-Gómez, L E; Alvarez, M; Rodríguez-Sevilla, J; Marrero, M C; Hernández, A

2009-06-01

A study of oxygen injection was performed in a completely filled gravity pipe, which is part of the South Tenerife reclaimed wastewater reuse scheme (Spain), in order to inhibit the appearance of anaerobic conditions by a nitrification-denitrification process. The pipe was 0.6 m in diameter and 62 km long and made of cast iron with a concrete inner coating, A high-pressure oxygen injection system was installed at 16 km from the pipe inlet, where severe anaerobic conditions appear. Experiments on oxygen injection were carried out with three different concentrations (7, 15 and 30 mg l(-1) O2). In all experiments, oxygen dissolved properly after injection, and no gas escapes were detected during water transportation. Most oxygen was consumed in the nitrification process, due to the low COD/NH4-N ratio, leading to a maximum production of oxidized nitrogen compounds of 7.5 mg l(-1) NO(x)-N with the 30 mg l(-1) O2 dose. Nitrification occured with nitrite accumulation, attributed to the presence of free ammonia within the range 1.2-1.4 mg l(-). Once the oxygen had been consumed, an apparent half-order denitrification took place, with limitation of biodegradable organic matter. The anoxic conditions led to a complete inhibition of sulphide generation.

Serpins in arthropod biology

OpenAIRE

Meekins, David A.; Kanost, Michael R.; Michel, Kristin

2016-01-01

Serpins are the largest known family of serine proteinase inhibitors and perform a variety of physiological functions in arthropods. Herein, we review the field of serpins in arthropod biology, providing an overview of current knowledge and topics of interest. Serpins regulate insect innate immunity via inhibition of serine proteinase cascades that initiate immune responses such as melanization and antimicrobial peptide production. In addition, several serpins with anti-pathogen activity are ...

Prepulse inhibition of auditory change-related cortical responses

Directory of Open Access Journals (Sweden)

Inui Koji

2012-10-01

Full Text Available Abstract Background Prepulse inhibition (PPI of the startle response is an important tool to investigate the biology of schizophrenia. PPI is usually observed by use of a startle reflex such as blinking following an intense sound. A similar phenomenon has not been reported for cortical responses. Results In 12 healthy subjects, change-related cortical activity in response to an abrupt increase of sound pressure by 5 dB above the background of 65 dB SPL (test stimulus was measured using magnetoencephalography. The test stimulus evoked a clear cortical response peaking at around 130 ms (Change-N1m. In Experiment 1, effects of the intensity of a prepulse (0.5 ~ 5 dB on the test response were examined using a paired stimulation paradigm. In Experiment 2, effects of the interval between the prepulse and test stimulus were examined using interstimulus intervals (ISIs of 50 ~ 350 ms. When the test stimulus was preceded by the prepulse, the Change-N1m was more strongly inhibited by a stronger prepulse (Experiment 1 and a shorter ISI prepulse (Experiment 2. In addition, the amplitude of the test Change-N1m correlated positively with both the amplitude of the prepulse-evoked response and the degree of inhibition, suggesting that subjects who are more sensitive to the auditory change are more strongly inhibited by the prepulse. Conclusions Since Change-N1m is easy to measure and control, it would be a valuable tool to investigate mechanisms of sensory gating or the biology of certain mental diseases such as schizophrenia.

Niche differentiation and evolution of comammox Nitrospira through a comparative genomics analysis

DEFF Research Database (Denmark)

Palomo, Alejandro; Fowler, Jane; Pedersen, Anders Gorm

of comammox Nitrospira, our analysis indicates transfer events with betaproteobacterial ammonia oxidizers. In addition, transfer events between comammox clade A and clade B were also detected for genes belonging to the ammonium oxidation pathway. Together, these results expand the actual knowledge......Nitrification, the biological oxidation of ammonium to nitrate, is a fundamental process in the nitrogen cycle and plays an important role in natural and engineered systems. Throughout the last century, nitrification was assumed to be a two-step process executed by two different functional groups...

Biological effects of 2450 MHZ microwave radiation on Raji-Cell in vitro

International Nuclear Information System (INIS)

Tan Ming; Zhang Mengdan; Xu Hao.

1988-01-01

A water circulating microwave exposure system designed by the authors was used to investigate the thermal and nonthermal biological effects at different power density (1.0mw/cm 2 , 3.9mw/cm 2 , 6.2mw/cm 2 , 8.3mw/cm 2 , 10.5mw/cm 2 ). The results show that the growth of Raji-Cell is inhibited significantly by microwave exposure in 8.3 mw/cm 2 and 10.5 mw/cm 2 groups in temperature controlled test (below 37.0 deg C). It shows that while the growth curve goes down, the rate of inhibition and time of generation increase. The degree of inhibition would increase when the medium temperature was not controlled. And, the mechanisms of thermal and nonthermal biological effects were discussed

MicroRNA-144 inhibits hepatocellular carcinoma cell proliferation

Indian Academy of Sciences (India)

MiR-144 was shown to besignificantly down-regulated in HCC tissues and cell lines. Subsequently, overexpression of miR-144 was transfectedinto HCC cell lines so as to investigate its biological function, including MTT, colony formation, and transwell assays.Gain of function assay revealed miR-144 remarkably inhibited ...

Microbial characterization of nitrification in a shallow, nitrogen-contaminated aquifer, Cape Cod, Massachusetts and detection of a novel cluster associated with nitrifying Betaproteobacteria

Science.gov (United States)

Miller, Daniel N.; Smith, Richard L.

2009-01-01

Groundwater nitrification is a poorly characterized process affecting the speciation and transport of nitrogen. Cores from two sites in a plume of contamination were examined using culture-based and molecular techniques targeting nitrification processes. The first site, located beneath a sewage effluent infiltration bed, received treated effluent containing O 2 (> 300 µM) and NH 4+ (51-800 µM). The second site was 2.5 km down-gradient near the leading edge of the ammonium zone within the contaminant plume and featured vertical gradients of O 2, NH 4+, and NO 3- (0-300, 0-500, and 100-200 µM with depth, respectively). Ammonia- and nitrite-oxidizers enumerated by the culture-based MPN method were low in abundance at both sites (1.8 to 350 g - 1 and 33 to 35,000 g - 1 , respectively). Potential nitrifying activity measured in core material in the laboratory was also very low, requiring several weeks for products to accumulate. Molecular analysis of aquifer DNA (nested PCR followed by cloning and 16S rDNA sequencing) detected primarily sequences associated with the Nitrosospira genus throughout the cores at the down-gradient site and a smaller proportion from the Nitrosomonas genus in the deeper anoxic, NH 4+ zone at the down-gradient site. Only a single Nitrosospira sequence was detected beneath the infiltration bed. Furthermore, the majority of Nitrosospira-associated sequences represent an unrecognized cluster. We conclude that an uncharacterized group associated with Nitrosospira dominate at the geochemically stable, down-gradient site, but found little evidence for Betaproteobacteria nitrifiers beneath the infiltration beds where geochemical conditions were more variable.

Evaluation of the nitrification inhibitor 3,4-dimethylpyrazole phosphate (DMPP) for N2O mitigation after grassland cultivation

DEFF Research Database (Denmark)

Kong, Xianwang

Temporary grasslands cover ca. 11 million ha and constitute more than 10% of the total arable land within EU-28; in Denmark, ca. 60% of the grasslands are included in crop rotations. The high productivity and the positive residual effect on succeeding crops are the main reasons of placing...... archaea (AOA), as revealed by mRNA transcripts of amoA gene. This inhibitory effect could be limited to the soil volume in close contact with residues, where residue decomposition and subsequent nitrification took place. In the field study, there was a trend towards lower biomass yield and N...... grasslands in crop rotations. At the transition phase, the mineralization of grass and clover residues incorporated by grassland cultivation can supply nitrogen to a succeeding crop; however, the plant N-uptake is low for several weeks at the early growth stage. During this period, as a result of increasing...

IL-12p35 Inhibits Neuroinflammation and Ameliorates Autoimmune Encephalomyelitis

Directory of Open Access Journals (Sweden)

Jin Kyeong Choi

2017-10-01

Full Text Available Multiple sclerosis (MS is an inflammatory demyelinating disease in which cytokines produced by immune cells that infiltrate the brain and spinal cord play a central role. We show here that the IL-12p35, the alpha subunit of IL-12 or IL-35 cytokine, might be an effective biologic for suppressing neuroinflammatory responses and ameliorating the pathology of experimental autoimmune encephalomyelitis (EAE, the mouse model of human MS. We further show that IL-12p35 conferred protection from neuropathy by inhibiting the expansion of pathogenic Th17 and Th1 cells and inhibiting trafficking of inflammatory cells into the brain and spinal cord. In addition, in vitro exposure of encephalitogenic cells to IL-12p35 suppressed their capacity to induce EAE by adoptive transfer. Importantly, the IL-12p35-mediated expansion of Treg and Breg cells and its amelioration of EAE correlated with inhibition of cytokine-induced activation of STAT1/STAT3 pathways. Moreover, IL-12p35 inhibited lymphocyte proliferation by suppressing the expressions of cell-cycle regulatory proteins. Taken together, these results suggest that IL-12p35 can be exploited as a novel biologic for treating central nervous system autoimmune diseases and offers the promise of ex vivo production of large amounts of Tregs and Bregs for immunotherapy.

Simultaneous nitrogen and phosphorus removal in the sulfur cycle-associated Enhanced Biological Phosphorus Removal (EBPR) process.

Science.gov (United States)

Wu, Di; Ekama, George A; Wang, Hai-Guang; Wei, Li; Lu, Hui; Chui, Ho-Kwong; Liu, Wen-Tso; Brdjanovic, Damir; van Loosdrecht, Mark C M; Chen, Guang-Hao

2014-02-01

Hong Kong has practiced seawater toilet flushing since 1958, saving 750,000 m(3) of freshwater every day. A high sulfate-to-COD ratio (>1.25 mg SO4(2-)/mg COD) in the saline sewage resulting from this practice has enabled us to develop the Sulfate reduction, Autotrophic denitrification and Nitrification Integrated (SANI(®)) process with minimal sludge production and oxygen demand. Recently, the SANI(®) process has been expanded to include Enhanced Biological Phosphorus Removal (EBPR) in an alternating anaerobic/limited-oxygen (LOS-EBPR) aerobic sequencing batch reactor (SBR). This paper presents further development - an anaerobic/anoxic denitrifying sulfur cycle-associated EBPR, named as DS-EBPR, bioprocess in an alternating anaerobic/anoxic SBR for simultaneous removal of organics, nitrogen and phosphorus. The 211 day SBR operation confirmed the sulfur cycle-associated biological phosphorus uptake utilizing nitrate as electron acceptor. This new bioprocess cannot only reduce operation time but also enhance volumetric loading of SBR compared with the LOS-EBPR. The DS-EBPR process performed well at high temperatures of 30 °C and a high salinity of 20% seawater. A synergistic relationship may exist between sulfur cycle and biological phosphorus removal as the optimal ratio of P-release to SO4(2-)-reduction is close to 1.0 mg P/mg S. There were no conventional PAOs in the sludge. Copyright © 2013 Elsevier Ltd. All rights reserved.

Development of bioengineering processes to transform greenhouse waste into energy, fertilizer and tomato

Energy Technology Data Exchange (ETDEWEB)

Brisson, D.; Masse, D.I. [Agriculture and Agri-Food Canada, Lennoxville, PQ (Canada). Dairy and Swine Research and Development Centre; Juteau, P. [Quebec Univ., Laval, PQ (Canada). INRS-Institut Armand Frappier; Saint-Laurent CEGEP, Montreal, PQ (Canada). Centre des technologies de l' eau; Dorais, M. [Agriculture and Agri-Food Canada, Quebec City, PQ (Canada). Horticultural Research Centre

2010-07-01

Methods to promote sustainable production systems in greenhouses were discussed with particular reference to anaerobic digestion (AD) and nitrification processes for waste and nutrient management and energy consumption. The high cost of organic soluble fertilizers and the difficulty in obtaining a quality product are strong limitations for converting conventional greenhouses to organic practices. AD has been shown to be a promising solution for disposal of tomato leaves pruned during greenhouse operations. Studies have shown that AD generates end-products, notably supernatant sludge that have agronomic benefits of land application for forage and cereal crops. However, little has been done for horticultural crops. Unlike field crops, nitrification of digester effluents is a key step for using AD effluents as fertilizers for vegetable greenhouse plants. Greenhouse vegetables need nitrogen mainly under the nitrate form for an adequate growth because the other forms of nitrogen are detrimental to plant and fruit quality. However, nitrification of AD supernatant can be challenging because of its high ammonia content and its inhibition potential of nitrifying micro-organisms. This study examined the few nitrification processes that have the potential to operate under these conditions.

Short exposure to acetylene to distinguish between nitrifier and denitrifier nitrous oxide production in soil and sediment samples

NARCIS (Netherlands)

Kester, R.A.; Boer, W. de; Laanbroek, H.J.

1996-01-01

The contribution of nitrifiers and denitrifiers to the nitrous oxide production in slurries of calcareous silt loam and river bank sediment at different oxygen concentrations was determined using acetylene as nitrification inhibitor. The addition of 10 Pa acetylene resulted in inhibition of

Short exposure to acetylene to distinguish between nitrifier and denitrifier nitrous oxide production in soil and sediment samples

NARCIS (Netherlands)

Kester, R.A.; De Boer, W.; Laanbroek, H.J.

1996-01-01

The contribution of nitrifiers and denitrifiers to the nitrous oxide production in slurries of calcareous silt loam and river bank sediment at different oxygen concentrations was determined using acetylene as nitrification inhibitor. The addition of 10 Pa acetylene resulted in inhibition of nitrous

A Biologically Motivated Multiresolution Approach to Contour Detection

Directory of Open Access Journals (Sweden)

Alessandro Neri

2007-01-01

Full Text Available Standard edge detectors react to all local luminance changes, irrespective of whether they are due to the contours of the objects represented in a scene or due to natural textures like grass, foliage, water, and so forth. Moreover, edges due to texture are often stronger than edges due to object contours. This implies that further processing is needed to discriminate object contours from texture edges. In this paper, we propose a biologically motivated multiresolution contour detection method using Bayesian denoising and a surround inhibition technique. Specifically, the proposed approach deploys computation of the gradient at different resolutions, followed by Bayesian denoising of the edge image. Then, a biologically motivated surround inhibition step is applied in order to suppress edges that are due to texture. We propose an improvement of the surround suppression used in previous works. Finally, a contour-oriented binarization algorithm is used, relying on the observation that object contours lead to long connected components rather than to short rods obtained from textures. Experimental results show that our contour detection method outperforms standard edge detectors as well as other methods that deploy inhibition.

Reforestation in southern China: revisiting soil N mineralization and nitrification after 8 years restoration

Science.gov (United States)

Mo, Qifeng; Li, Zhi'An; Zhu, Weixing; Zou, Bi; Li, Yingwen; Yu, Shiqin; Ding, Yongzhen; Chen, Yao; Li, Xiaobo; Wang, Faming

2016-01-01

Nitrogen availability and tree species selection play important roles in reforestation. However, long-term field studies on the effects and mechanisms of tree species composition on N transformation are very limited. Eight years after tree seedlings were planted in a field experiment, we revisited the site and tested how tree species composition affects the dynamics of N mineralization and nitrification. Both tree species composition and season significantly influenced the soil dissolved organic carbon (DOC) and nitrogen (DON). N-fixing Acacia crassicarpa monoculture had the highest DON, and 10-mixed species plantation had the highest DOC. The lowest DOC and DON concentrations were both observed in Eucalyptus urophylla monoculture. The tree species composition also significantly affected net N mineralization rates. The highest rate of net N mineralization was found in A. crassicarpa monoculture, which was over twice than that in Castanopsis hystrix monoculture. The annual net N mineralization rates of 10-mixed and 30-mixed plantations were similar as that of N-fixing monoculture. Since mixed plantations have good performance in increasing soil DOC, DON, N mineralization and plant biodiversity, we recommend that mixed species plantations should be used as a sustainable approach for the restoration of degraded land in southern China.

Start-up and bacterial community compositions of partial nitrification in moving bed biofilm reactor.

Science.gov (United States)

Liu, Tao; Mao, Yan-Jun; Shi, Yan-Ping; Quan, Xie

2017-03-01

Partial nitrification (PN) has been considered as one of the promising processes for pretreatment of ammonium-rich wastewater. In this study, a kind of novel carriers with enhanced hydrophilicity and electrophilicity was implemented in a moving bed biofilm reactor (MBBR) to start up PN process. Results indicated that biofilm formation rate was higher on modified carriers. In comparison with the reactor filled with traditional carriers (start-up period of 21 days), it took only 14 days to start up PN successfully with ammonia removal efficiency and nitrite accumulation rate of 90 and 91%, respectively, in the reactor filled with modified carriers. Evident changes of spatial distributions and community structures had been detected during the start-up. Free-floating cells existed in planktonic sludge, while these microorganisms trended to form flocs in the biofilm. High-throughput pyrosequencing results indicated that Nitrosomonas was the predominant ammonia-oxidizing bacterium (AOB) in the PN system, while Comamonas might also play a vital role for nitrogen oxidation. Additionally, some other bacteria such as Ferruginibacter, Ottowia, Saprospiraceae, and Rhizobacter were selected to establish stable footholds. This study would be potentially significant for better understanding the microbial features and developing efficient strategies accordingly for MBBR-based PN operation.

Sustainable nitrification in fluidised bed reactor with immobilised ...

African Journals Online (AJOL)

TOC concentration above 800 mg·ℓ-1 was not able to cause the inhibition of the heterotrophs over the nitrifiers. PCR-DGGE results indicated the presence of Nitrosomonas (ammonia-oxidising bacteria) and Nitrobacter (nitrite-oxidising bacteria) in the immobilised pellets. Keywords: bioimmobilisation, ammonium, partial ...

On the role of proteasomes in cell biology and proteasome inhibition as a novel frontier in the development of immunosuppressants.

Science.gov (United States)

Wu, Jiangping

2002-11-01

The proteasome, a large protease complex in cells, is the major machinery for protein degradation. It was previously considered a humble garbage collector, performing housekeeping duties to remove misfolded or spent proteins. Until recently, the interests of immunologists in proteasomes were focused largely on its role in antigen processing. Its real importance in cell biology has only been revealed contemporarily due to the availability of relatively specific inhibitors. It has now become increasingly clear that many aspects of immune responses highly depend on proper proteasome activity. Recently, a proteasome inhibitor has been successfully used to prevent acute as well as ongoing heart allograft rejection in mice. Such inhibitors are also efficacious in treating several autoimmune diseases, such as arthritis, psoriasis, and probably type I diabetes, in animal models. Phase II and III clinical trials of proteasome inhibitors in treating various tumors have shown promising results, and the side-effects of these drugs are tolerable. Therefore, proteasome inhibition represents a new and promising frontier in immunosuppressant development.

Effects of different fertilizers on the abundance and community structure of ammonia oxidizers in a yellow clay soil.

Science.gov (United States)

Yao, Huaiying; Huang, Sha; Qiu, Qiongfen; Li, Yaying; Wu, Lianghuan; Mi, Wenhai; Dai, Feng

2016-08-01

Yellow clay paddy soil (Oxisols) is a typical soil with low productivity in southern China. Nitrification inhibitors and slow release fertilizers have been used to improve nitrogen fertilizer utilization and reduce environmental impaction of the paddy soil. However, their effects on ammonia-oxidizing archaea (AOA) and ammonia-oxidizing bacteria (AOB) in paddy soil have rarely been investigated. In the present work, we compared the influences of several slow release fertilizers and nitrification inhibitors on the community structure and activities of the ammonia oxidizers in yellow clay soil. The abundances and community compositions of AOA and AOB were determined with qPCR, terminal restriction fragment length polymorphism (T-RFLP), and clone library approaches. Our results indicated that the potential nitrification rate (PNR) of the soil was significantly related to the abundances of both AOA and AOB. Nitrogen fertilizer application stimulated the growth of AOA and AOB, and the combinations of nitrapyrin with urea (NPU) and urea-formaldehyde (UF) inhibited the growth of AOA and AOB, respectively. Compared with other treatments, the applications of NPU and UF also led to significant shifts in the community compositions of AOA and AOB, respectively. NPU showed an inhibitory effect on AOA T-RF 166 bp that belonged to Nitrosotalea. UF had a negative effect on AOB T-RF 62 bp that was assigned to Nitrosospira. These results suggested that NPU inhibited PNR and increased nitrogen use efficiency (NUE) by inhibiting the growth of AOA and altering AOA community. UF showed no effect on NUE but decreased AOB abundance and shifted AOB community.

An integrated chemical biology approach identifies specific vulnerability of Ewing's sarcoma to combined inhibition of Aurora kinases A and B.

Science.gov (United States)

Winter, Georg E; Rix, Uwe; Lissat, Andrej; Stukalov, Alexey; Müllner, Markus K; Bennett, Keiryn L; Colinge, Jacques; Nijman, Sebastian M; Kubicek, Stefan; Kovar, Heinrich; Kontny, Udo; Superti-Furga, Giulio

2011-10-01

Ewing's sarcoma is a pediatric cancer of the bone that is characterized by the expression of the chimeric transcription factor EWS-FLI1 that confers a highly malignant phenotype and results from the chromosomal translocation t(11;22)(q24;q12). Poor overall survival and pronounced long-term side effects associated with traditional chemotherapy necessitate the development of novel, targeted, therapeutic strategies. We therefore conducted a focused viability screen with 200 small molecule kinase inhibitors in 2 different Ewing's sarcoma cell lines. This resulted in the identification of several potential molecular intervention points. Most notably, tozasertib (VX-680, MK-0457) displayed unique nanomolar efficacy, which extended to other cell lines, but was specific for Ewing's sarcoma. Furthermore, tozasertib showed strong synergies with the chemotherapeutic drugs etoposide and doxorubicin, the current standard agents for Ewing's sarcoma. To identify the relevant targets underlying the specific vulnerability toward tozasertib, we determined its cellular target profile by chemical proteomics. We identified 20 known and unknown serine/threonine and tyrosine protein kinase targets. Additional target deconvolution and functional validation by RNAi showed simultaneous inhibition of Aurora kinases A and B to be responsible for the observed tozasertib sensitivity, thereby revealing a new mechanism for targeting Ewing's sarcoma. We further corroborated our cellular observations with xenograft mouse models. In summary, the multilayered chemical biology approach presented here identified a specific vulnerability of Ewing's sarcoma to concomitant inhibition of Aurora kinases A and B by tozasertib and danusertib, which has the potential to become a new therapeutic option.

Biological activities of Rumex dentatus L: Evaluation of methanol ...

African Journals Online (AJOL)

PRECIOUS

2009-12-15

Dec 15, 2009 ... of different the extracts of R. dentatus effectively inhibited tumor ... Plants contain thousands of biologically active mole- .... The vials were kept open over night with .... between prokaryotic and eukaryotic cells (Stachel and.

The Relationship of Behavioral Activation and Inhibition Systems (BAS/BIS, Difficulty of Emotional Regulation, Metacognition with Worry

Directory of Open Access Journals (Sweden)

S. Soltan Mohammadlou

2014-11-01

Full Text Available Worry is a popular phenomenon and a common feature of many disorders, especially anxiety disorders. The objective of the study was to predict worry by using three predictive factors related to biological, emotional and cognition areas. In this study, behavioral inhibition, behavioral activation system, difficulties in emotion regulation and metacognition were examined as predictive variables. In a correlation cross-sectional design, 234 Medical Group students [BA and MA] of Tehran University of Medical Sciences participated in this study by using cluster sampling. The students completed these scales: Behavioral Inhibition and Behavioral Activation Systems (BAS/BIS, Difficulty of Emotion Regulation Scale (DERS, Metacognition Questionnaire-30 (MCQ-30 and Penn State Worry Questionnaire (PSWQ. Behavioral inhibition system, difficulty of emotion rgulation and metacognition variables were significantly positively correlated with worry (P<0/0 1(. Behavioral activation system variable was not significantly associated with worry. Stepwise multiple regression analysis indicated a predictive model for worry in which behavioral inhibition system, difficulty of emotional regulation and metacognition were its components respectively. Behavioral activation system was not included in the model. The findings of this study that worry should be studied in different biological, emotional, and metacognitive aspects. The results also emphasize the role of behavioral inhibition system as a temperamental and biological factor in psychopathology of worry in adult population.

Pythium species and isolate diversity influence inhibition by the biological control agent Streptomyces lydicus

Science.gov (United States)

Disease control of soilborne pathogens by biological control agents has often been inconsistent under field conditions. One factor that may contribute to this inconsistency is the variability in response among pathogen populations and/or communities to the selected biological control agent. One hund...

Biological Potential of Sixteen Legumes in China

Directory of Open Access Journals (Sweden)

Guixing Ren

2011-10-01

Full Text Available Phenolic acids have been identified in a variety of legumes including lima bean, broad bean, common bean, pea, jack bean, goa bean, adzuki bean, hyacinth bean, chicking vetch, garbanzo bean, dral, cow bean, rice bean, mung bean and soybean. The present study was carried out with the following aims: (1 to identify and quantify the individual phenolic acid and determine the total phenolic content (TPC; (2 to assess their antioxidant activity, inhibition activities of α-glucosidase, tyrosinase, and formation of advanced glycation endproducts; and (3 to investigate correlations among the phytochemicals and biological activity. Common bean possesses the highest antioxidant activity and advanced glycation endproducts formation inhibition activity. Adzuki bean has the highest α-glucosidase inhibition activity, and mung bean has the highest tyrosinase inhibition activity. There are significant differences in phytochemical content and functional activities among the bean species investigated. Selecting beans can help treat diseases such as dermatological hyperpigmentation illness, type 2 diabetes and associated cardiovascular diseases.

Vanadate monomers and dimers both inhibit the human prostatic acid phosphatase.

Science.gov (United States)

Crans, D C; Simone, C M; Saha, A K; Glew, R H

1989-11-30

A combination of enzyme kinetics and 51V NMR spectroscopy was used to identify the species of vanadate that inhibits acid phosphatases. Monomeric vanadate was shown to inhibit wheat germ and potato acid phosphatases. At pH 5.5, the vanadate dimer inhibits the human prostatic acid phosphatase whereas at pH 7.0 it is the vanadate monomer that inhibits this enzyme. The pH-dependent shift in the affinity of the prostatic phosphatase for vanadate is presumably due to deprotonation of an amino acid side chain in or near the binding site resulting in a conformational change in the protein. pH may be a subtle effector of the insulin-like vanadate activity in biological systems and may explain some of the differences in selectivity observed with the protein phosphatases.

Engineering Design and Operation Report: Biological ...

Science.gov (United States)

Many regions in the United States have excessive levels of ammonia in their drinking water sources (e.g., ground and surface waters) as a result of naturally occurring processes, agricultural and urban runoff, concentrated animal feeding operations, municipal wastewater treatment plants, and other sources. Ammonia is not regulated by the U.S. Environmental Protection Agency (EPA) as a contaminant. Based on a 2003 World Health Organization (WHO) assessment, ammonia levels in groundwater are typically below 0.2 milligrams per liter (mg/L), and do not pose a direct health concern at levels expected in drinking water (WHO 2003); however, they may pose a concern when nitrification of significant levels of ammonia from the source water occurs in the drinking water distribution system. Specifically, this nitrification, which is the conversion of the ammonia to nitrite and nitrate by bacteria, leads to water quality issues, such as potential corrosion problems, oxidant demand, taste and odor complaints, and elevated nitrite levels (Bremer et al.,2001; Fleming et al., 2005; Lee et al., 1980; Odell et al., 1996; Rittman & Snoeyink, 1984; Suffet et al., 1996). The EPA’s regulatory limits for nitrite and nitrate (at the entry point to the distribution system) are 0.1 and 10 mg N/L, respectively. Ammonia in water may also pose problems with water treatment effectiveness. For example, in source waters containing both ammonia and arsenic, the ammonia may negatively impact

Different mechanisms are involved in the antibody mediated inhibition of ligand binding to the urokinase receptor

DEFF Research Database (Denmark)

List, K; Høyer-Hansen, G; Rønne, E

1999-01-01

Certain monoclonal antibodies are capable of inhibiting the biological binding reactions of their target proteins. At the molecular level, this type of effect may be brought about by completely different mechanisms, such as competition for common binding determinants, steric hindrance or interfer......Certain monoclonal antibodies are capable of inhibiting the biological binding reactions of their target proteins. At the molecular level, this type of effect may be brought about by completely different mechanisms, such as competition for common binding determinants, steric hindrance......) can be employed as a highly useful tool to characterize the inhibitory mechanism of specific antagonist antibodies. Two inhibitory antibodies against uPAR, mAb R3 and mAb R5, were shown to exhibit competitive and non-competitive inhibition, respectively, of ligand binding to the receptor. The former...

Immunomodulatory Effects of Macrolide Antibiotics - Part 1 : Biological Mechanisms

NARCIS (Netherlands)

Altenburg, J.; de Graaff, C. S.; van der Werf, T. S.; Boersma, W. G.

2011-01-01

Macrolide antibiotics are well known for their antibacterial and anti-inflammatory properties. This article provides an overview of the biological mechanisms through which macrolides exert this 'double effect'. Their antibacterial effect consists of the inhibition of bacterial protein synthesis,

Nontarget effects of chemical pesticides and biological pesticide on rhizospheric microbial community structure and function in Vigna radiata.

Science.gov (United States)

Singh, Sunil; Gupta, Rashi; Kumari, Madhu; Sharma, Shilpi

2015-08-01

Intensive agriculture has resulted in an indiscriminate use of pesticides, which demands in-depth analysis of their impact on indigenous rhizospheric microbial community structure and function. Hence, the objective of the present work was to study the impact of two chemical pesticides (chlorpyrifos and cypermethrin) and one biological pesticide (azadirachtin) at two dosages on the microbial community structure using cultivation-dependent approach and on rhizospheric bacterial communities involved in nitrogen cycle in Vigna radiata rhizosphere through cultivation-independent technique of real-time PCR. Cultivation-dependent study highlighted the adverse effects of both chemical pesticide and biopesticide on rhizospheric bacterial and fungal communities at different plant growth stages. Also, an adverse effect on number of genes and transcripts of nifH (nitrogen fixation); amoA (nitrification); and narG, nirK, and nirS (denitrification) was observed. The results from the present study highlighted two points, firstly that nontarget effects of pesticides are significantly detrimental to soil microflora, and despite being of biological origin, azadirachtin exerted negative impact on rhizospheric microbial community of V. radiata behaving similar to chemical pesticides. Hence, such nontarget effects of chemical pesticide and biopesticide in plants' rhizosphere, which bring out the larger picture in terms of their ecotoxicological effect, demand a proper risk assessment before application of pesticides as agricultural amendments.

Complete genome sequence of Bacillus velezensis S3-1, a potential biological pesticide with plant pathogen inhibiting and plant promoting capabilities.

Science.gov (United States)

Jin, Qing; Jiang, Qiuyue; Zhao, Lei; Su, Cuizhu; Li, Songshuo; Si, Fangyi; Li, Shanshan; Zhou, Chenhao; Mu, Yonglin; Xiao, Ming

2017-10-10

Antagonistic soil microorganisms, which are non-toxic, harmless non-pollutants, can effectively reduce the density of pathogenic species by some ways. Bacillus velezensis strain S3-1 was isolated from the rhizosphere soil of cucumber, and was shown to inhibit plant pathogens, promote plant growth and efficiently colonize rhizosphere soils. The strain produced 13 kinds of lipopeptide antibiotics, belonging to the surfactin, iturin and fengycin families. Here, we presented the complete genome sequence of S3-1. The genome consists of one chromosome without plasmids and also contains the biosynthetic gene cluster that encodes difficidin, macrolactin, surfactin and fengycin. The genome contains 86 tRNA genes, 27 rRNA genes and 57 antibiotic-related genes. The complete genome sequence of B. velezensis S3-1 provides useful information to further detect the molecular mechanisms behind antifungal actions, and will facilitate its potential as a biological pesticide in the agricultural industry. Copyright © 2017 Elsevier B.V. All rights reserved.

dNP2-ctCTLA-4 inhibits German cockroach extract-induced allergic airway inflammation and hyper-responsiveness via inhibition of Th2 responses.

Science.gov (United States)

Lim, Sangho; Ho Sohn, Jung; Koo, Ja-Hyun; Park, Jung-Won; Choi, Je-Min

2017-08-04

German cockroaches are major household allergens that can trigger allergic airway inflammatory diseases with sensitive T-cell responses. Although the use of immune modulatory biologics, such as antibodies, to mediate allergic responses has recently been examined, only systemic administration is available because of the size limitations on intranasal administration. Here we utilized a cell-permeable peptide, dNP2, to deliver the cytoplasmic domain of cytotoxic T-lymphocyte antigen-4 (ctCTLA-4) through the airway epithelium to modulate Th2 responses in a German cockroach extract (GCE)-induced allergic airway inflammation model. The intranasal delivery efficiency of the dNP2-dTomato protein to the lungs was higher in GCE-induced asthmatic lung parenchymal cells compared to the sham cells. Intranasal administration of the dNP2-ctCTLA-4 protein inhibited airway hyper-responsiveness and reduced airway inflammation and remodeling, including goblet cell metaplasia and collagen deposition around the bronchi. The number of infiltrated cells, including eosinophils, and the levels of IL-4, IL-5, IL-13 and IFN-γ in the lungs were significantly reduced, presumably owing to inhibition of Th2 differentiation. However, intranasal administration of CTLA4-Ig did not inhibit airway inflammation. These results collectively suggest that dNP2-ctCTLA-4 is an efficient intranasally applicable candidate biologic for treating allergic asthma.

Statistical analysis of joint toxicity in biological growth experiments

DEFF Research Database (Denmark)

Spliid, Henrik; Tørslev, J.

1994-01-01

The authors formulate a model for the analysis of designed biological growth experiments where a mixture of toxicants is applied to biological target organisms. The purpose of such experiments is to assess the toxicity of the mixture in comparison with the toxicity observed when the toxicants are...... is applied on data from an experiment where inhibition of the growth of the bacteria Pseudomonas fluorescens caused by different mixtures of pentachlorophenol and aniline was studied.......The authors formulate a model for the analysis of designed biological growth experiments where a mixture of toxicants is applied to biological target organisms. The purpose of such experiments is to assess the toxicity of the mixture in comparison with the toxicity observed when the toxicants...

Biologic treatment in Sjögren's syndrome.

Science.gov (United States)

Sada, Pablo Ruiz; Isenberg, David; Ciurtin, Coziana

2015-02-01

SS is a chronic systemic autoimmune disease characterized by decreased exocrine gland function. A variety of other disease manifestations may also be present, including general constitutional symptoms and extraglandular features. A multidisciplinary approach focused on both local and systemic medical therapies is needed as the disease has a wide clinical spectrum. The current treatment for SS is mainly symptomatic. However, there is evidence that systemic drugs are effective in controlling extraglandular manifestations of the disease. Overall evidence for the role of conventional immunosuppressive therapy is limited. A number of attempts to use biologic therapies have led to variable results. Biologic agents targeting B cells, such as rituximab, epratuzumab and belimumab, have shown promising results, but further studies are needed to validate the findings. Early-phase studies with abatacept and alefacept proved that T cell stimulation inhibition is another potentially effective target for SS treatment. Modulation or inhibition of other targets such as IFN, IL-6 and Toll-like receptor are also currently being investigated. We have summarized the available evidence regarding the efficacy of biologic treatments and discuss other potential therapies targeting pathways or molecules recognized as being involved in the pathogenesis of SS. © The Author 2014. Published by Oxford University Press on behalf of the British Society for Rheumatology. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

Lactate dehydrogenase activity is inhibited by methylmalonate in vitro.

Science.gov (United States)

Saad, Laura O; Mirandola, Sandra R; Maciel, Evelise N; Castilho, Roger F

2006-04-01

Methylmalonic acidemia (MMAemia) is an inherited metabolic disorder of branched amino acid and odd-chain fatty acid metabolism, involving a defect in the conversion of methylmalonyl-coenzyme A to succinyl-coenzyme A. Systemic and neurological manifestations in this disease are thought to be associated with the accumulation of methylmalonate (MMA) in tissues and biological fluids with consequent impairment of energy metabolism and oxidative stress. In the present work we studied the effect of MMA and two other inhibitors of mitochondrial respiratory chain complex II (malonate and 3-nitropropionate) on the activity of lactate dehydrogenase (LDH) in tissue homogenates from adult rats. MMA potently inhibited LDH-catalyzed conversion of lactate to pyruvate in liver and brain homogenates as well as in a purified bovine heart LDH preparation. LDH was about one order of magnitude less sensitive to inhibition by MMA when catalyzing the conversion of pyruvate to lactate. Kinetic studies on the inhibition of brain LDH indicated that MMA inhibits this enzyme competitively with lactate as a substrate (K (i)=3.02+/-0.59 mM). Malonate and 3-nitropropionate also strongly inhibited LDH-catalyzed conversion of lactate to pyruvate in brain homogenates, while no inhibition was observed by succinate or propionate, when present in concentrations of up to 25 mM. We propose that inhibition of the lactate/pyruvate conversion by MMA contributes to lactate accumulation in blood, metabolic acidemia and inhibition of gluconeogenesis observed in patients with MMAemia. Moreover, the inhibition of LDH in the central nervous system may also impair the lactate shuttle between astrocytes and neurons, compromising neuronal energy metabolism.

Glyphosate and AMPA inhibit cancer cell growth through inhibiting intracellular glycine synthesis

Directory of Open Access Journals (Sweden)

Li Q

2013-07-01

Full Text Available Qingli Li,1,2 Mark J Lambrechts,1 Qiuyang Zhang,1 Sen Liu,1 Dongxia Ge,1 Rutie Yin,2 Mingrong Xi,2 Zongbing You1 1Departments of Structural and Cellular Biology and Orthopaedic Surgery, Tulane Cancer Center and Louisiana Cancer Research Consortium, Tulane Center for Stem Cell Research and Regenerative Medicine, and Tulane Center for Aging, Tulane University Health Sciences Center, New Orleans, LA, USA; 2Department of Obstetrics and Gynecology, West China Second University Hospital, Sichuan University, Chengdu, People’s Republic of China Abstract: Glycine is a nonessential amino acid that is reversibly converted from serine intracellularly by serine hydroxymethyltransferase. Glyphosate and its degradation product, aminomethylphosphonic acid (AMPA, are analogs to glycine, thus they may inhibit serine hydroxymethyltransferase to decrease intracellular glycine synthesis. In this study, we found that glyphosate and AMPA inhibited cell growth in eight human cancer cell lines but not in two immortalized human normal prostatic epithelial cell lines. AMPA arrested C4-2B and PC-3 cancer cells in the G1/G0 phase and inhibited entry into the S phase of the cell cycle. AMPA also promoted apoptosis in C4-2B and PC-3 cancer cell lines. AMPA upregulated p53 and p21 protein levels as well as procaspase 9 protein levels in C4-2B cells, whereas it downregulated cyclin D3 protein levels. AMPA also activated caspase 3 and induced cleavage of poly (adenosine diphosphate [ADP]-ribose polymerase. This study provides the first evidence that glyphosate and AMPA can inhibit proliferation and promote apoptosis of cancer cells but not normal cells, suggesting that they have potentials to be developed into a new anticancer therapy. Keywords: serine hydroxymethyltransferase, prostate cancer, apoptosis

Calcium carbide (CaC2): Effect on fruit set and yield of mango ...

African Journals Online (AJOL)

Application of slow release calcium carbide (CaC2) to the soil are thought to improve plant growth and yield through the generation of acetylene, which inhibits nitrification, thereby reducing nitrogen losses which may be converted to physiologically significant concentrations of the plant growth regulator ethylene. The effects ...

Temporal variability of soil microbial communities after application of dicyandiamide-treated swine slurry and mineral fertilizers

NARCIS (Netherlands)

Suleiman, A.K.A.; Gonzatto, Rogerio; Aita, Celso; Lupatini, M.; Jacques, Rodrigo; Kuramae, E.E.; Antoniolli, Zaida; Roesch, Luiz

2016-01-01

In modern agriculture, mineral and organic fertilization account for most of the global anthropogenic N2O emissions. A strategy to prevent or to reduce emissions of greenhouse gases such as N2O is the use of nitrification inhibitors, which temporarily inhibit the microbial conversion of soil

Using paired in situ high frequency nitrate measurements to better understand controls on nitrate concentrations and estimate nitrification rates in a wastewater-impacted river

Science.gov (United States)

Kraus, Tamara; O'Donnell, Katy; Downing, Bryan D.; Burau, Jon R.; Bergamaschi, Brian

2017-01-01

We used paired continuous nitrate ( ) measurements along a tidally affected river receiving wastewater discharge rich in ammonium ( ) to quantify rates of change in  concentration ( ) and estimate nitrification rates.  sensors were deployed 30 km apart in the Sacramento River, California (USA), with the upstream station located immediately above the regional wastewater treatment plant (WWTP). We used a travel time model to track water transit between the stations and estimated  every 15 min (October 2013 to September 2014). Changes in concentration were strongly related to water temperature. In the presence of wastewater, was generally positive, ranging from about 7 µM d−1 in the summer to near zero in the winter. Numerous periods when the WWTP halted discharge allowed the  to be estimated under no-effluent conditions and revealed that in the absence of effluent, net gains in  were substantially lower but still positive in the summer and negative (net sink) in the winter. Nitrification rates of effluent-derived NH4 ( ) were estimated from the difference between  measured in the presence versus absence of effluent and ranged from 1.5 to 3.4 µM d−1, which is within literature values but tenfold greater than recently reported for this region.  was generally lower in winter (∼2 µM d−1) than summer (∼3 µM d−1). This in situ, high frequency approach provides advantages over traditional discrete sampling, incubation, and tracer methods and allows measurements to be made over broad areas for extended periods of time. Incorporating this approach into environmental monitoring programs can facilitate our ability to protect and manage aquatic systems.

Detection of endogenous lithium in neuropsychiatric disorders--a model for biological transmutation.

Science.gov (United States)

Kurup, Ravi Kumar; Kurup, Parameswara Achutha

2002-01-01

The human hypothalamus produces an endogenous membrane Na(+)-K(+) ATPase inhibitor, digoxin. A digoxin induced model of cellular/neuronal quantal state and perception has been described by the authors. Biological transmutation has been described in microbial systems in the quantal state. The study focuses on the plasma levels of digoxin, RBC membrane Na(+)-K(+) ATPase activity, plasma levels of magnesium and lithium in neuropsychiatric and systemic disorders. Inhibition of RBC membrane Na(+)-K(+) ATPase activity was observed in most cases along with an increase in the levels of serum digoxin and lithium and a decrease in the level of serum Mg(++). The generation of endogenous lithium would obviously occur due to biological transmutation from magnesium. Digoxin and lithium together can produce added membrane Na(+)-K(+) ATPase inhibition. The role of membrane Na(+)-K(+) ATPase inhibition in the pathogenesis of neuropsychiatric and systemic disorders is discussed. The inhibition of membrane Na(+)-K(+) ATPase can contribute to an increase in intracellular calcium and a decrease in magnesium, which can result in a defective neurotransmitter transport mechanism, mitochondrial dysfunction and apoptosis, defective golgi body function and protein processing dysfunction, immune dysfunction and oncogenesis. Copyright 2002 John Wiley & Sons, Ltd.

Effect of pH, temperature and water activity on the inhibition of ...

African Journals Online (AJOL)

WiN 7

2012-01-31

Jan 31, 2012 ... Low values of water activity and acid pH were unfavourable for the growth inhibition. ... treatments, such as surface sterilization and high-dose irradiation ..... biological control of grey mould (Botrytis cinerea Pers.:Fr.) on fresh-.

Salinomycin, a polyether ionophoric antibiotic, inhibits adipogenesis

International Nuclear Information System (INIS)

Szkudlarek-Mikho, Maria; Saunders, Rudel A.; Yap, Sook Fan; Ngeow, Yun Fong; Chin, Khew-Voon

2012-01-01

Highlights: ► Salinomycin inhibits preadipocyte differentiation into adipocytes. ► Salinomycin inhibits transcriptional regulation of adipogenesis. ► Pharmacological effects of salinomycin suggest toxicity in cancer therapy. -- Abstract: The polyether ionophoric antibiotics including monensin, salinomycin, and narasin, are widely used in veterinary medicine and as food additives and growth promoters in animal husbandry including poultry farming. Their effects on human health, however, are not fully understood. Recent studies showed that salinomycin is a cancer stem cell inhibitor. Since poultry consumption has risen sharply in the last three decades, we asked whether the consumption of meat tainted with growth promoting antibiotics might have effects on adipose cells. We showed in this report that the ionophoric antibiotics inhibit the differentiation of preadipocytes into adipocytes. The block of differentiation is not due to the induction of apoptosis nor the inhibition of cell proliferation. In addition, salinomycin also suppresses the transcriptional activity of the CCAAT/enhancer binding proteins and the peroxisome proliferator-activated receptor γ. These results suggest that the ionophoric antibiotics can be exploited as novel anti-obesity therapeutics and as pharmacological probes for the study of adipose biology. Further, the pharmacological effects of salinomycin could be a harbinger of its toxicity on the adipose tissue and other susceptible target cells in cancer therapy.

The role of antioxidant-protein interactions in biological membrane

International Nuclear Information System (INIS)

McGillivray, Duncan J; Singh, Rachna; Melton, Laurence D.; Worcester, David L.; Gilbert, Elliot P.

2009-01-01

Full text: Oxidative damage of cellular membranes has been linked to a variety of disease pathologies, including cardiac disease, Alzheimer's and complications due to diabetes. The oxidation of unsaturated and polyunsaturated fatty acid chains found in cellular membranes leads to significant alteration in membrane physical properties, including lipid orientation and membrane permeability, which ultimately affect biological function. Polyphenols are naturally occurring phytochemicals present in a number of fruit and vegetables that are of interest for their anti-oxidative powers. These polyphenols inhibit lipid oxidation in cellular membrane surfaces, although the mechanism of this inhibition is not entirely clear. Moreover, the polyphenols have significant binding affinity for proteins, which can lead to the formation of soluble and insoluble protein-polyphenol complexes Significantly, in the presence of casein proteins the oxidation inhibition the polyphenols in the membrane is significantly enhanced (as assessed by Lipid Peroxidation Inhibition Capacity assays). Thus the antioxidant pathway appears to involve these protein/polyphenol complexes, as well as direct antioxidant action by the polyphenol. Here we discuss neutron and x-ray scattering results from phospholipid membranes, looking at the positioning of two examples of polyphenolic antioxidants in phospholipid membranes, quercetin and phloretin, the antioxidants' impact on the membrane organisation, and the interaction between antioxidant and extra-membranous protein. This information sheds light on the mechanism of antioxidant protection in these systems, which may be used to understand biological responses to oxidative stress.

Osthole inhibits bone metastasis of breast cancer

OpenAIRE

Wu, Chunyu; Sun, Zhenping; Guo, Baofeng; Ye, Yiyi; Han, Xianghui; Qin, Yuenong; Liu, Sheng

2017-01-01

Bone is one of the most common sites for breast cancer metastasis, which greatly contributes to patient morbidity and mortality. Osthole, a major extract from Cnidium monnieri (L.), exhibits many biological and pharmacological activities, however, its potential as a therapeutic agent in the treatment of breast cancer bone metastases remain poorly understood. In this study, we set out to investigate whether osthole could inhibit breast cancer metastasis to bone in mice and clarified the potent...

A Biological Porin Engineered into a Molecular, Nanofluidic Diode

NARCIS (Netherlands)

Miedema, Henk; Vrouenraets, Maarten; Wierenga, Jenny; Meijberg, Wim; Robillard, George; Eisenberg, Bob

2007-01-01

We changed the nonrectifying biological porin OmpF into a nanofluidic diode. To that end, we engineered a pore that possesses two spatially separated selectivity filters of opposite charge where either cations or anions accumulate. The observed current inhibition under applied reverse bias voltage

Influence of road salt on the biological removal of nitrogen

OpenAIRE

Eliška Horniaková; Milan Búgel

2007-01-01

Processes occuring in the aeration tank remove nitrogen from the organic substances in wastewater by using the bacterii. Nitrification utilize the metabolism of aerobic bacterii Nitrosomonas, Nitrococus, Nitrospira, Nitrobacter Nitrocystis a Nitrosobolus. Pseudosomonas, Chromobacterium, Denitrobacillus a Micrococus are denitrification anaerobic bacterii. The bacterii are lithotrophic and they are sensitive to pH of wastewater. Chlorine and heavy metals are toxic for these bacterii. For a corr...

Delivering the lateral inhibition punchline: it's all about the timing.

Science.gov (United States)

Axelrod, Jeffrey D

2010-10-26

Experimental and theoretical biologists have long been fascinated with the emergence of self-organizing patterns in developing organisms, and much attention has focused on Notch-mediated lateral inhibition. Within sheets of cells that may adopt either of two possible cell fates, lateral inhibition establishes patterns through the activity of a negative intercellular feedback loop involving the receptor, Notch, and its ligands Delta or Serrate. Despite a long history of intensive study in Drosophila, where the mechanism was first described, as well as in other organisms, new work continues to yield important insights. Mathematical modeling, combined with biological analyses, has now shed light on two features of the process: how antagonistic and activating ligand-receptor interactions work together to accelerate inhibition and ensure fidelity, and how filopodial dynamics contribute to the observed pattern refinement and spacing.

From biological neural networks to thinking machines: Transitioning biological organizational principles to computer technology

Science.gov (United States)

Ross, Muriel D.

1991-01-01

The three-dimensional organization of the vestibular macula is under study by computer assisted reconstruction and simulation methods as a model for more complex neural systems. One goal of this research is to transition knowledge of biological neural network architecture and functioning to computer technology, to contribute to the development of thinking computers. Maculas are organized as weighted neural networks for parallel distributed processing of information. The network is characterized by non-linearity of its terminal/receptive fields. Wiring appears to develop through constrained randomness. A further property is the presence of two main circuits, highly channeled and distributed modifying, that are connected through feedforward-feedback collaterals and biasing subcircuit. Computer simulations demonstrate that differences in geometry of the feedback (afferent) collaterals affects the timing and the magnitude of voltage changes delivered to the spike initiation zone. Feedforward (efferent) collaterals act as voltage followers and likely inhibit neurons of the distributed modifying circuit. These results illustrate the importance of feedforward-feedback loops, of timing, and of inhibition in refining neural network output. They also suggest that it is the distributed modifying network that is most involved in adaptation, memory, and learning. Tests of macular adaptation, through hyper- and microgravitational studies, support this hypothesis since synapses in the distributed modifying circuit, but not the channeled circuit, are altered. Transitioning knowledge of biological systems to computer technology, however, remains problematical.

Adrenaline inhibits osteogenesis via repressing miR-21 expression.

Science.gov (United States)

Chen, Danying; Wang, Zuolin

2017-01-01

Sympathetic signaling is involved in bone homeostasis; however, the cellular and molecular mechanisms remain unknown. In this study, we found that the psychological stress mediator adrenaline inhibited osteogenic differentiation of human bone marrow-derived stem cells (hMSC) by reducing microRNA-21 (miR-21) expression. Briefly, adrenaline significantly inhibited the osteogenic differentiation of hMSCs, as observed with both Alizarin red staining and maker gene expression (RUNX2, OSX, OCN, and OPN). During this process, miR-21 was suppressed by adrenaline via inhibition of histone acetylation, as verified by H3K9Ac chromatin immunoprecipitation (ChIP) assay. MiR-21 was confirmed to promote hMSC osteogenic differentiation, and overexpression of miR-21 reversed the impeditive effect of adrenaline on hMSC osteogenic differentiation. Our results demonstrate that down-regulation of miR-21 is responsible for the adrenaline-mediated inhibition of hMSC osteogenic differentiation. These findings indicate a regulation of bone metabolism by psychological stress and also provide a molecular basis for psychological stress-associated bone diseases. © 2016 International Federation for Cell Biology.

Evaluating Environmental Effects of Dredged Material Management Alternatives: A Technical Framework

Science.gov (United States)

1992-11-01

fluctuating flows and tamperatures would be difficult. Biological processes such as nitrification, nutrient catabolism, and photosynthesis are important...communities as tidal flats, seagrass meadows, oyster beds, clam flats, fishing reefs, and freshwater aquatic plant establishment. The bottom of many

The effect of organic matter and nitrification inhibitor on 15 N H4 and 15 N O3 absorption by the maize

International Nuclear Information System (INIS)

Saito, S.M.T.

1974-01-01

The effect of the forms 15 N H 4 and 15 N O 3 in presence or absence of organic matter and of the nitrification inhibitor AM (2-amino-4-chloro-6-methyl-pyrimidine) in dry matter weight and nitrogen content of the plant derived from soil and form fertilizer is studied. The experiment was carried out in greenhouse and the test plant was the hybrid Maize Centralmex . The fertilizers ( 15 N H 4 ) 2 S O 4 and Na 15 N O 3 , were added in two levels: 40 and 120 Kg N/ha, with 1,02% of N and 1,4% of 15 N in excess, respectively. Three soils of different physical and chemical characteristics were used; Regosol intergrade, Latosol Roxo and Podzolized de Lins e Marilia var. Marilia. (M.A.C.)

Acetylene and oxygen as inhibitors of nitrous oxide production in Nitrosomonas europaea and Nitrosospira briensis: a cautionary tale

NARCIS (Netherlands)

Wrage, N.; Velthof, G.L.; Oenema, O.; Laanbroek, H.J.

2004-01-01

Autotrophic ammonia-oxidizing bacteria produce nitrous oxide (N2O) as a by-product of nitrification or as an intermediate of nitrifier denitrification. In soil incubations, acetylene (C2H2) and large partial pressures of oxygen (O2) are used to distinguish between these sources. C2H2 inhibits

Research on inhibition of corneal neovascularization

Directory of Open Access Journals (Sweden)

Zhang-Hui Yang

2015-12-01

Full Text Available Corneal transparency is the basis of the normal physiological functions.However, corneal neovascularization(CNVmay occur in the infection, mechanical and chemical injury or under other pathological conditions,which make the cornea lose original transparency and severe visual impairment. In recent years, along with the development of immunology, molecular biology, biochemistry and other disciplines, there is more in-depth understanding on the CNV, and clinical treatment of CNV has made new breakthroughs. This article provides an overview of the inhibition of CNV.

Antimycobacterial and Photosynthetic Electron Transport Inhibiting Activity of Ring-Substituted 4-Arylamino-7-Chloroquinolinium Chlorides

Directory of Open Access Journals (Sweden)

Alois Cizek

2013-09-01

Full Text Available In this study, a series of twenty-five ring-substituted 4-arylamino-7-chloroquinolinium chlorides were prepared and characterized. The compounds were tested for their activity related to inhibition of photosynthetic electron transport (PET in spinach (Spinacia oleracea L. chloroplasts and also primary in vitro screening of the synthesized compounds was performed against mycobacterial species. 4-[(2-Bromophenylamino]-7-chloroquinolinium chloride showed high biological activity against M. marinum, M. kansasii, M. smegmatis and 7-chloro-4-[(2-methylphenylamino]quinolinium chloride demonstrated noteworthy biological activity against M. smegmatis and M. avium subsp. paratuberculosis. The most effective compounds demonstrated quite low toxicity (LD50 > 20 μmol/L against the human monocytic leukemia THP-1 cell line within preliminary in vitro cytotoxicity screening. The tested compounds were found to inhibit PET in photosystem II. The PET-inhibiting activity expressed by IC50 value of the most active compound 7-chloro-4-[(3-trifluoromethylphenylamino]quinolinium chloride was 27 μmol/L and PET-inhibiting activity of ortho-substituted compounds was significantly lower than this of meta- and para-substituted ones. The structure-activity relationships are discussed for all compounds.

Psoriatic arthritis: treatment strategies using biologic agents

Directory of Open Access Journals (Sweden)

C. Palazzi

2012-06-01

Full Text Available The traditional management of psoriatic arthritis (PsA includes NSAIDs, corticosteroids and DMARDs. Advancement in the knowledge of the immunopathogenesis of PsA has been associated with the development of biologic agents which have revolutionized the management of the disease. Among biologics drugs, there are the 4 currently availablee anti-TNFα blocking agents (etanercept, infliximab, adalimumab and golimumab which are more effective than traditional DMARDs on symptoms/signs of inflammation, quality of life, function, and in inhibiting the progression of the structural joint damage. Despite of the high cost, TNF inhibitors are costeffective on both the musculoskeletal and skin manifestations of psoriatic disease.

A historical perspective of algorithmic lateral inhibition and accumulative computation in computer vision

OpenAIRE

Delgado García, Ana E.; Carmona, Enrique; Fernández Caballero, Antonio; López Bonal, María Teresa

2011-01-01

Certainly, one of the prominent ideas of Professor José Mira was that it is absolutely mandatory to specify the mechanisms and/or processes underlying each task and inference mentioned in an architecture in order to make operational that architecture. The conjecture of the last fifteen years of joint research has been that any bottom-up organization may be made operational using two biologically inspired methods called ?algorithmic lateral inhibition?, a generalization of lateral inhibition a...

Feed-Forward versus Feedback Inhibition in a Basic Olfactory Circuit.

Directory of Open Access Journals (Sweden)

Tiffany Kee

2015-10-01

Full Text Available Inhibitory interneurons play critical roles in shaping the firing patterns of principal neurons in many brain systems. Despite difference in the anatomy or functions of neuronal circuits containing inhibition, two basic motifs repeatedly emerge: feed-forward and feedback. In the locust, it was proposed that a subset of lateral horn interneurons (LHNs, provide feed-forward inhibition onto Kenyon cells (KCs to maintain their sparse firing--a property critical for olfactory learning and memory. But recently it was established that a single inhibitory cell, the giant GABAergic neuron (GGN, is the main and perhaps sole source of inhibition in the mushroom body, and that inhibition from this cell is mediated by a feedback (FB loop including KCs and the GGN. To clarify basic differences in the effects of feedback vs. feed-forward inhibition in circuit dynamics we here use a model of the locust olfactory system. We found both inhibitory motifs were able to maintain sparse KCs responses and provide optimal odor discrimination. However, we further found that only FB inhibition could create a phase response consistent with data recorded in vivo. These findings describe general rules for feed-forward versus feedback inhibition and suggest GGN is potentially capable of providing the primary source of inhibition to the KCs. A better understanding of how inhibitory motifs impact post-synaptic neuronal activity could be used to reveal unknown inhibitory structures within biological networks.

The isothiocyanate class of bioactive nutrients covalently inhibit the MEKK1 protein kinase

International Nuclear Information System (INIS)

Cross, Janet V; Foss, Frank W; Rady, Joshua M; Macdonald, Timothy L; Templeton, Dennis J

2007-01-01

Dietary isothiocyanates (ITCs) are electrophilic compounds that have diverse biological activities including induction of apoptosis and effects on cell cycle. They protect against experimental carcinogenesis in animals, an activity believed to result from the transcriptional induction of 'Phase 2' enzymes. The molecular mechanism of action of ITCs is unknown. Since ITCs are electrophiles capable of reacting with sulfhydryl groups on amino acids, we hypothesized that ITCs induce their biological effects through covalent modification of proteins, leading to changes in cell regulatory events. We previously demonstrated that stress-signaling kinase pathways are inhibited by other electrophilic compounds such as menadione. We therefore tested the effects of nutritional ITCs on MEKK1, an upstream regulator of the SAPK/JNK signal transduction pathway. The activity of MEKK1 expressed in cells was monitored using in vitro kinase assays to measure changes in catalytic activity. The activity of endogenous MEKK1, immunopurified from ITC treated and untreated LnCAP cells was also measured by in vitro kinase assay. A novel labeling and affinity reagent for detection of protein modification by ITCs was synthesized and used in competition assays to monitor direct modification of MEKK1 by ITC. Finally, immunoblots with phospho-specific antibodies were used to measure the activity of MAPK protein kinases. ITCs inhibited the MEKK1 protein kinase in a manner dependent on a specific cysteine residue in the ATP binding pocket. Inhibition of MEKK1 catalytic activity was due to direct, covalent and irreversible modification of the MEKK1 protein itself. In addition, ITCs inhibited the catalytic activity of endogenous MEKK1. This correlated with inhibition of the downstream target of MEKK1 activity, i.e. the SAPK/JNK kinase. This inhibition was specific to SAPK, as parallel MAPK pathways were unaffected. These results demonstrate that MEKK1 is directly modified and inhibited by

Mutant p53 protein localized in the cytoplasm inhibits autophagy.

Science.gov (United States)

Morselli, Eugenia; Tasdemir, Ezgi; Maiuri, Maria Chiara; Galluzzi, Lorenzo; Kepp, Oliver; Criollo, Alfredo; Vicencio, José Miguel; Soussi, Thierry; Kroemer, Guido

2008-10-01

The knockout, knockdown or chemical inhibition of p53 stimulates autophagy. Moreover, autophagy-inducing stimuli such as nutrient depletion, rapamycin or lithium cause the depletion of cytoplasmic p53, which in turn is required for the induction of autophagy. Here, we show that retransfection of p53(-/-) HCT 116 colon carcinoma cells with wild type p53 decreases autophagy down to baseline levels. Surprisingly, one third among a panel of 22 cancer-associated p53 single amino acid mutants also inhibited autophagy when transfected into p53(-/-) cells. Those variants of p53 that preferentially localize to the cytoplasm effectively repressed autophagy, whereas p53 mutants that display a prominently nuclear distribution failed to inhibit autophagy. The investigation of a series of deletion mutants revealed that removal of the DNA-binding domain from p53 fails to interfere with its role in the regulation of autophagy. Altogether, these results identify the cytoplasmic localization of p53 as the most important feature for p53-mediated autophagy inhibition. Moreover, the structural requirements for the two biological activities of extranuclear p53, namely induction of apoptosis and inhibition of autophagy, are manifestly different.

Culture-independent detection of 'TM7' bacteria in a streptomycin-resistant acidophilic nitrifying process

Energy Technology Data Exchange (ETDEWEB)

Kurogi, T.; Linh, N. T. T.; Kuroki, T.; Yamada, T. [Department of Environmental and Life Science, Toyohashi University of Technology, Toyohashi 441-8580 (Japan); Hiraishi, A. [Department of Environmental and Life Science, Toyohashi University of Technology, Toyohashi 441-8580, Japan and Electronics-inspired Interdisciplinary Institute (EIIRIS), Toyohashi University of Technology, Toyohashi 441-8580 (Japan)

2014-02-20

Nitrification in biological wastewater treatment processes has been believed for long time to take place under neutral conditions and is inhibited under acidic conditions. However, we previously constructed acidophilic nitrifying sequencing-batch reactors (ANSBRs) being capable of nitrification at < pH 4 and harboring bacteria of the candidate phylum 'TM7' as the major constituents of the microbial community. In light of the fact that the 16S rRNA of TM7 bacteria has a highly atypical base substitution possibly responsible for resistance to streptomycin at the ribosome level, this study was undertaken to construct streptomycin-resistant acidophilic nitrifying (SRAN) reactors and to demonstrate whether TM7 bacteria are abundant in these reactors. The SRAN reactors were constructed by seeding with nitrifying sludge from an ANSBR and cultivating with ammonium-containing mineral medium (pH 4.0), to which streptomycin at a concentration of 10, 30 and 50 mg L{sup −1} was added. In all reactors, the pH varied between 2.7 and 4.0, and ammonium was completely converted to nitrate in every batch cycle. PCR-aided denaturing gradient gel electrophoresis (DGGE) targeting 16S rRNA genes revealed that some major clones assigned to TM7 bacteria and Gammaproteobacteria were constantly present during the overall period of operation. Fluorescence in situ hybridization (FISH) with specific oligonucleotide probes also showed that TM7 bacteria predominated in all SRAN reactors, accounting for 58% of the total bacterial population on average. Although the biological significance of the TM7 bacteria in the SRAN reactors are unknown, our results suggest that these bacteria are possibly streptomycin-resistant and play some important roles in the acidophilic nitrifying process.

Richness, biomass, and nutrient content of a wetland macrophyte community affect soil nitrogen cycling in a diversity-ecosystem functioning experiment

Science.gov (United States)

Korol, Alicia R.; Ahn, Changwoo; Noe, Gregory

2016-01-01

The development of soil nitrogen (N) cycling in created wetlands promotes the maturation of multiple biogeochemical cycles necessary for ecosystem functioning. This development proceeds from gradual changes in soil physicochemical properties and influential characteristics of the plant community, such as competitive behavior, phenology, productivity, and nutrient composition. In the context of a 2-year diversity experiment in freshwater mesocosms (0, 1, 2, 3, or 4 richness levels), we assessed the direct and indirect impacts of three plant community characteristics – species richness, total biomass, and tissue N concentration – on three processes in the soil N cycle – soil net ammonification, net nitrification, and denitrification potentials. Species richness had a positive effect on net ammonification potential (NAP) through higher redox potentials and likely faster microbial respiration. All NAP rates were negative, however, due to immobilization and high rates of ammonium removal. Net nitrification was inhibited at higher species richness without mediation from the measured soil properties. Higher species richness also inhibited denitrification potential through increased redox potential and decreased nitrification. Both lower biomass and/or higher tissue ratios of carbon to nitrogen, characteristics indicative of the two annual plants, were shown to have stimulatory effects on all three soil N processes. The two mediating physicochemical links between the young macrophyte community and microbial N processes were soil redox potential and temperature. Our results suggest that early-successional annual plant communities play an important role in the development of ecosystem N multifunctionality in newly created wetland soils.

Effects of cattle slurry and nitrification inhibitor application on spatial soil O2 dynamics and N2O production pathways

DEFF Research Database (Denmark)

Quan, Nguyen Van; Wu, Di; Kong, Xianwang

2017-01-01

decomposition. Here, we applied O2 planar optode and N2O isotopomer techniques to investigate the linkage between soil O2 dynamics and N2O production pathways in soils treated with cattle slurry (treatment CS) and tested the effect of the nitrification inhibitor 3,4-dimethyl pyrazole phosphate, DMPP (treatment......Application of cattle slurry to grassland soil has environmental impacts such as ammonia volatilization and greenhouse gas emissions. The extent, however, depends on application method and soil conditions through their effects on infiltration and oxygen (O2) availability during subsequent...... CSD). Twodimensional planar optode images of soil O2 over time revealed that O2 depletion ultimately extended to 1.5 cm depth in CS, as opposed to 1.0 cm in CSD. The 15N site preference (SP) and d18O of emitted N2O varied between 11-25‰and 35e47‰, respectively, indicating a mixture of production...

Partial nitrification enhances natural attenuation of nitrogen in a septic system plume.

Science.gov (United States)

Caschetto, M; Robertson, W; Petitta, M; Aravena, R

2018-06-01

Natural attenuation of nitrogen (N) was investigated in a well characterized septic system plume at a campground in Ontario, Canada. Total inorganic N (TIN) concentrations in deeper portions of the plume were about one third of the septic tank value of 40.7mgL -1 . NH 4 + and NO 3 - isotopic characterization were used to provide insight into potential attenuation processes. Concentrations of NH 4 + and NO 3 - were highly variable in the plume, but approached the septic tank TIN value in some shallow zones and exhibited δ 15 N values like the tank value of +6‰. However, isotopic enrichment (up to +24‰ for NH 4 + and +45‰ for NO 3 - ) and declining TIN concentrations in the deeper zones indicated that anaerobic ammonium oxidation contributed to the TIN attenuation. The degree of isotopic enrichment increased at lower NH 4 + concentrations and was consistent with Rayleigh-type distillation with an enrichment factor (Ɛ) of -5.1‰. Additionally, decreasing DOC values with depth and the concomitant enrichment of δ 15 N NO3 and δ 18 O NO3 , suggested that denitrification was also active. The N attenuation observed in the Killarney plume was partly due to incomplete nitrification that occurred because of the shallow water table, which varied from only 0.2-0.7m below the tile bed infiltration pipes. Moreover, some of the monitoring locations with the shallowest water table distances from the infiltration pipes, had the highest degree of TIN attenuation (70-90%) in the plume. This behavior suggests that controlling water table distance from the infiltration pipes could be a useful mechanism for enhancing N attenuation in septic system plumes. Copyright © 2017 Elsevier B.V. All rights reserved.

Functional and community-level soil microbial responses to zinc addition may depend on test system biocomplexity.

NARCIS (Netherlands)

Sverdrup, L.E.; Linjordet, R.; Stomman, G.; Hagen, S.B.; van Gestel, C.A.M.; Frostegard, A.; Sorheim, R.

2006-01-01

The effect of zinc on soil nitrification and composition of the microbial community in soil was investigated using a full factorial experiment with five zinc concentrations and four levels of biological complexity (microbes only, microbes and earthworms (Eisenia fetida), microbes and Italian

Removal of nitrogen from anaerobically digested swine wastewater ...

African Journals Online (AJOL)

This result indicates that the sulfur-packed biofilter would be used as an efficient option for denitrification by autotrophic denitrifiers during swine wastewater treatment. Key words: Biological nitrogen removal, nitrification, denitrification, chemical oxygen demand (COD), intermittent aeration, sulfur-packed bed reactor, swine ...

Salinomycin, a polyether ionophoric antibiotic, inhibits adipogenesis

Energy Technology Data Exchange (ETDEWEB)

Szkudlarek-Mikho, Maria; Saunders, Rudel A. [Department of Medicine, Biochemistry and Cancer Biology, Center for Diabetes and Endocrine Research, College of Medicine, University of Toledo, Toledo, OH 43614 (United States); Yap, Sook Fan [Faculty of Medicine and Health Sciences, Department of Pre-Clinical Sciences, University of Tunku Abdul Rahman (Malaysia); Ngeow, Yun Fong [Department of Medical Microbiology, Faculty of Medicine, University of Malaya, Kuala Lumpur 50603 (Malaysia); Chin, Khew-Voon, E-mail: khew-voon.chin@utoledo.edu [Department of Medicine, Biochemistry and Cancer Biology, Center for Diabetes and Endocrine Research, College of Medicine, University of Toledo, Toledo, OH 43614 (United States)

2012-11-30

Highlights: Black-Right-Pointing-Pointer Salinomycin inhibits preadipocyte differentiation into adipocytes. Black-Right-Pointing-Pointer Salinomycin inhibits transcriptional regulation of adipogenesis. Black-Right-Pointing-Pointer Pharmacological effects of salinomycin suggest toxicity in cancer therapy. -- Abstract: The polyether ionophoric antibiotics including monensin, salinomycin, and narasin, are widely used in veterinary medicine and as food additives and growth promoters in animal husbandry including poultry farming. Their effects on human health, however, are not fully understood. Recent studies showed that salinomycin is a cancer stem cell inhibitor. Since poultry consumption has risen sharply in the last three decades, we asked whether the consumption of meat tainted with growth promoting antibiotics might have effects on adipose cells. We showed in this report that the ionophoric antibiotics inhibit the differentiation of preadipocytes into adipocytes. The block of differentiation is not due to the induction of apoptosis nor the inhibition of cell proliferation. In addition, salinomycin also suppresses the transcriptional activity of the CCAAT/enhancer binding proteins and the peroxisome proliferator-activated receptor {gamma}. These results suggest that the ionophoric antibiotics can be exploited as novel anti-obesity therapeutics and as pharmacological probes for the study of adipose biology. Further, the pharmacological effects of salinomycin could be a harbinger of its toxicity on the adipose tissue and other susceptible target cells in cancer therapy.

Synthesis of N-(6-Arylbenzo[d]thiazole-2-acetamide Derivatives and Their Biological Activities: An Experimental and Computational Approach.

Science.gov (United States)

Gull, Yasmeen; Rasool, Nasir; Noreen, Mnaza; Altaf, Ataf Ali; Musharraf, Syed Ghulam; Zubair, Muhammad; Nasim, Faiz-Ul-Hassan; Yaqoob, Asma; DeFeo, Vincenzo; Zia-Ul-Haq, Muhammad

2016-02-25

A new series of N-(6-arylbenzo[d]thiazol-2-yl)acetamides were synthesized by C-C coupling methodology in the presence of Pd(0) using various aryl boronic pinacol ester/acids. The newly synthesized compounds were evaluated for various biological activities like antioxidant, haemolytic, antibacterial and urease inhibition. In bioassays these compounds were found to have moderate to good activities. Among the tested biological activities screened these compounds displayed the most significant activity for urease inhibition. In urease inhibition, all compounds were found more active than the standard used. The compound N-(6-(p-tolyl)benzo[d]thiazol-2-yl)acetamide was found to be the most active. To understand this urease inhibition, molecular docking studies were performed. The in silico studies showed that these acetamide derivatives bind to the non-metallic active site of the urease enzyme. Structure-activity studies revealed that H-bonding of compounds with the enzyme is important for its inhibition.

Effect of dissolved oxygen on nitrogen removal and process control in aerobic granular sludge reactor

International Nuclear Information System (INIS)

Yuan Xiangjuan; Gao Dawen

2010-01-01

A sequencing batch reactor (SBR) with aerobic granular sludge was operated to determine the effect of different DO concentrations on biological nitrogen removal process and to investigate the spatial profiles of DO, ORP and pH as online control parameters in such systems. The results showed that DO concentration had a significant effect on nitrification efficiencies and the profiles of DO, ORP and pH. The specific nitrification rate was decreased from 0.0595 mgNH 4 + -N/(gMLSS min) to 0.0251 mgNH 4 + -N/(gMLSS min) after DO concentration was dropped off from 4.5 mg/L to 1.0 mg/L. High DO concentration improved the nitrification and increased the volumetric NH 4 + -N removal. Low DO concentration enhanced TIN removal, while prolonged the nitrification duration. Also there existed a good correlation between online control parameters (ORP, pH) and nutrient (COD, NH 4 + -N, NO 2 - -N, NO 3 - -N) variations in aerobic granular sludge reactor when DO was 2.5 mg/L, 3.5 mg/L and 4.5 mg/L. However it was difficult to identify the end of nitrification and denitrification when DO was 1.0 mg/L, due to no apparent bending points on ORP and pH curves. In conclusion, the optimal DO concentration was suggested at 2.5 mg/L as it not only achieved high nitrogen removal efficiency and decreased the reaction duration, but also saved operation cost by aeration and mixing.

Design principles in biological networks

Science.gov (United States)

Goyal, Sidhartha

Much of biology emerges from networks of interactions. Even in a single bacterium such as Escherichia coli, there are hundreds of coexisting gene and protein networks. Although biological networks are the outcome of evolution, various physical and biological constraints limit their functional capacity. The focus of this thesis is to understand how functional constraints such as optimal growth in mircoorganisms and information flow in signaling pathways shape the metabolic network of bacterium E. coli and the quorum sensing network of marine bacterium Vibrio harveyi, respectively. Metabolic networks convert basic elemental sources into complex building-blocks eventually leading to cell's growth. Therefore, typically, metabolic pathways are often coupled both by the use of a common substrate and by stoichiometric utilization of their products for cell growth. We showed that such a coupled network with product-feedback inhibition may exhibit limit-cycle oscillations which arise via a Hopf bifurcation. Furthermore, we analyzed several representative metabolic modules and find that, in all cases, simple product-feedback inhibition allows nearly optimal growth, in agreement with the predicted growth-rate by the flux-balance analysis (FBA). Bacteria have fascinating and diverse social lives. They display coordinated group behaviors regulated by quorum sensing (QS) systems. The QS circuit of V. harveyi integrates and funnels different ecological information through a common phosphorelay cascade to a set of small regulatory RNAs (sRNAs) that enables collective behavior. We analyzed the signaling properties and information flow in the QS circuit, which provides a model for information flow in signaling networks more generally. A comparative study of post-transcriptional and conventional transcriptional regulation suggest a niche for sRNAs in allowing cells to transition quickly yet reliably between distinct states. Furthermore, we develop a new framework for analyzing signal

Potent inhibition of drug-resistant HIV protease variants by monoclonal antibodies

Czech Academy of Sciences Publication Activity Database

Bartoňová, Vanda; Král, Vlastimil; Sieglová, Irena; Brynda, Jiří; Fábry, Milan; Hořejší, Magdalena; Kožíšek, Milan; Grantz Šašková, Klára; Konvalinka, Jan; Sedláček, Juraj; Řezáčová, Pavlína

2008-01-01

Roč. 78, č. 3 (2008), s. 275-277 ISSN 0166-3542 R&D Projects: GA MZd NR8571 Institutional research plan: CEZ:AV0Z50520514; CEZ:AV0Z40550506 Keywords : HIV protease * drug resistance * Inhibiting antibody Subject RIV: EB - Genetics ; Molecular Biology Impact factor: 3.613, year: 2008

Kinetic Interpretation of Nitrogen Removal in Pilot Scale Experiments

DEFF Research Database (Denmark)

Harremoës, Poul; Sinkjær, Ole

1995-01-01

with biological and chemical phosphorus removal. Nitrification and denitrification rates have been measured in batch tests on activated sludge extracted from the pilot plants and by measuring transient concentrations during the alternating mode of operation in the aerobic and anoxic tanks. The data were......Pilot plant experiments have been performed over a period of four years in order to establish an experimental basis for the upgrading of the treatment plants of The City of Copenhagen to nutrient removal. The choice of design is the alternating mode of operating biological nitrogen removal...... normalized to standard conditions by correcting them according to the kinetic theory. The average normalized nitrification rate was measured to be between 54 and 60 mg NH~-N/(g VSSn~t' h) by different test methods at 7°C. The denitrification rate was measured to vary between 0.85 and 0.95mg NO~--N/(g VSS. h...

Cysteine-independent activation/inhibition of heme oxygenase-2

Directory of Open Access Journals (Sweden)

Dragic Vukomanovic

2016-01-01

Full Text Available Reactive thiols of cysteine (cys residues in proteins play a key role in transforming chemical reactivity into a biological response. The heme oxygenase-2 (HO-2 isozyme contains two cys residues that have been implicated in binding of heme and also the regulation of its activity. In this paper, we address the question of a role for cys residues for the HO-2 inhibitors or activators designed in our laboratory. We tested the activity of full length recombinant human heme oxygenase-2 (FL-hHO-2 and its analog in which cys265 and cys282 were both replaced by alanine to determine the effect on activation by menadione (MD and inhibition by QC-2350. Similar inhibition by QC-2350 and almost identical activation by MD was observed for both recombinant FL-hHO-2s. Our findings are interpreted to mean that thiols of FL-hHO-2s are not involved in HO-2 activation or inhibition by the compounds that have been designed and identified by us. Activation or inhibition of HO-2 by our compounds should be attributed to a mechanism other than altering binding affinity of HO-2 for heme through cys265 and cys282.

Cysteine-independent activation/inhibition of heme oxygenase-2.

Science.gov (United States)

Vukomanovic, Dragic; Rahman, Mona N; Maines, Mahin D; Ozolinš, Terence Rs; Szarek, Walter A; Jia, Zongchao; Nakatsu, Kanji

2016-03-01

Reactive thiols of cysteine (cys) residues in proteins play a key role in transforming chemical reactivity into a biological response. The heme oxygenase-2 (HO-2) isozyme contains two cys residues that have been implicated in binding of heme and also the regulation of its activity. In this paper, we address the question of a role for cys residues for the HO-2 inhibitors or activators designed in our laboratory. We tested the activity of full length recombinant human heme oxygenase-2 (FL-hHO-2) and its analog in which cys265 and cys282 were both replaced by alanine to determine the effect on activation by menadione (MD) and inhibition by QC-2350. Similar inhibition by QC-2350 and almost identical activation by MD was observed for both recombinant FL-hHO-2s. Our findings are interpreted to mean that thiols of FL-hHO-2s are not involved in HO-2 activation or inhibition by the compounds that have been designed and identified by us. Activation or inhibition of HO-2 by our compounds should be attributed to a mechanism other than altering binding affinity of HO-2 for heme through cys265 and cys282.

Reactor design for minimizing product inhibition during enzymatic lignocellulose hydrolysis: I. Significance and mechanism of cellobiose and glucose inhibition on cellulolytic enzymes

DEFF Research Database (Denmark)

Andric, Pavle; Meyer, Anne S.; Jensen, Peter Arendt

2010-01-01

Achievement of efficient enzymatic degradation of cellulose to glucose is one of the main prerequisites and one of the main challenges in the biological conversion of lignocellulosic biomass to liquid fuels and other valuable products. The specific inhibitory interferences by cellobiose and glucose...... on enzyme-catalyzed cellulose hydrolysis reactions impose significant limitations on the efficiency of lignocellulose conversion especially at high-biomass dry matter conditions. To provide the base for selecting the optimal reactor conditions, this paper reviews the reaction kinetics, mechanisms......, and significance of this product inhibition, notably the cellobiose and glucose inhibition, on enzymatic cellulose hydrolysis. Particular emphasis is put on the distinct complexity of cellulose as a substrate, the multi-enzymatic nature of the cellulolytic degradation, and the particular features of cellulase...

Exploiting the MDM2-CK1α Protein-Protein Interface to Develop Novel Biologics That Induce UBL-Kinase-Modification and Inhibit Cell Growth

Science.gov (United States)

Huart, Anne-Sophie; MacLaine, Nicola J.; Narayan, Vikram; Hupp, Ted R.

2012-01-01

Protein-protein interactions forming dominant signalling events are providing ever-growing platforms for the development of novel Biologic tools for controlling cell growth. Casein Kinase 1 α (CK1α) forms a genetic and physical interaction with the murine double minute chromosome 2 (MDM2) oncoprotein resulting in degradation of the p53 tumour suppressor. Pharmacological inhibition of CK1 increases p53 protein level and induces cell death, whilst small interfering RNA-mediated depletion of CK1α stabilizes p53 and induces growth arrest. We mapped the dominant protein-protein interface that stabilizes the MDM2 and CK1α complex in order to determine whether a peptide derived from the core CK1α-MDM2 interface form novel Biologics that can be used to probe the contribution of the CK1-MDM2 protein-protein interaction to p53 activation and cell viability. Overlapping peptides derived from CK1α were screened for dominant MDM2 binding sites using (i) ELISA with recombinant MDM2; (ii) cell lysate pull-down towards endogenous MDM2; (iii) MDM2-CK1α complex-based competition ELISA; and (iv) MDM2-mediated ubiquitination. One dominant peptide, peptide 35 was bioactive in all four assays and its transfection induced cell death/growth arrest in a p53-independent manner. Ectopic expression of flag-tagged peptide 35 induced a novel ubiquitin and NEDD8 modification of CK1α, providing one of the first examples whereby NEDDylation of a protein kinase can be induced. These data identify an MDM2 binding motif in CK1α which when isolated as a small peptide can (i) function as a dominant negative inhibitor of the CK1α-MDM2 interface, (ii) be used as a tool to study NEDDylation of CK1α, and (iii) reduce cell growth. Further, this approach provides a technological blueprint, complementing siRNA and chemical biology approaches, by exploiting protein-protein interactions in order to develop Biologics to manipulate novel types of signalling pathways such as cross-talk between

Exploiting the MDM2-CK1α protein-protein interface to develop novel biologics that induce UBL-kinase-modification and inhibit cell growth.

Directory of Open Access Journals (Sweden)

Anne-Sophie Huart

Full Text Available Protein-protein interactions forming dominant signalling events are providing ever-growing platforms for the development of novel Biologic tools for controlling cell growth. Casein Kinase 1 α (CK1α forms a genetic and physical interaction with the murine double minute chromosome 2 (MDM2 oncoprotein resulting in degradation of the p53 tumour suppressor. Pharmacological inhibition of CK1 increases p53 protein level and induces cell death, whilst small interfering RNA-mediated depletion of CK1α stabilizes p53 and induces growth arrest. We mapped the dominant protein-protein interface that stabilizes the MDM2 and CK1α complex in order to determine whether a peptide derived from the core CK1α-MDM2 interface form novel Biologics that can be used to probe the contribution of the CK1-MDM2 protein-protein interaction to p53 activation and cell viability. Overlapping peptides derived from CK1α were screened for dominant MDM2 binding sites using (i ELISA with recombinant MDM2; (ii cell lysate pull-down towards endogenous MDM2; (iii MDM2-CK1α complex-based competition ELISA; and (iv MDM2-mediated ubiquitination. One dominant peptide, peptide 35 was bioactive in all four assays and its transfection induced cell death/growth arrest in a p53-independent manner. Ectopic expression of flag-tagged peptide 35 induced a novel ubiquitin and NEDD8 modification of CK1α, providing one of the first examples whereby NEDDylation of a protein kinase can be induced. These data identify an MDM2 binding motif in CK1α which when isolated as a small peptide can (i function as a dominant negative inhibitor of the CK1α-MDM2 interface, (ii be used as a tool to study NEDDylation of CK1α, and (iii reduce cell growth. Further, this approach provides a technological blueprint, complementing siRNA and chemical biology approaches, by exploiting protein-protein interactions in order to develop Biologics to manipulate novel types of signalling pathways such as cross

Biological treatment of concentrated hazardous, toxic, andradionuclide mixed wastes without dilution

Energy Technology Data Exchange (ETDEWEB)

Stringfellow, William T.; Komada, Tatsuyuki; Chang, Li-Yang

2004-06-15

Approximately 10 percent of all radioactive wastes produced in the U. S. are mixed with hazardous or toxic chemicals and therefore can not be placed in secure land disposal facilities. Mixed wastes containing hazardous organic chemicals are often incinerated, but volatile radioactive elements are released directly into the biosphere. Some mixed wastes do not currently have any identified disposal option and are stored locally awaiting new developments. Biological treatment has been proposed as a potentially safer alternative to incineration for the treatment of hazardous organic mixed wastes, since biological treatment would not release volatile radioisotopes and the residual low-level radioactive waste would no longer be restricted from land disposal. Prior studies have shown that toxicity associated with acetonitrile is a significant limiting factor for the application of biotreatment to mixed wastes and excessive dilution was required to avoid inhibition of biological treatment. In this study, we demonstrate that a novel reactor configuration, where the concentrated toxic waste is drip-fed into a complete-mix bioreactor containing a pre-concentrated active microbial population, can be used to treat a surrogate acetonitrile mixed waste stream without excessive dilution. Using a drip-feed bioreactor, we were able to treat a 90,000 mg/L acetonitrile solution to less than 0.1 mg/L final concentration using a dilution factor of only 3.4. It was determined that the acetonitrile degradation reaction was inhibited at a pH above 7.2 and that the reactor could be modeled using conventional kinetic and mass balance approaches. Using a drip-feed reactor configuration addresses a major limiting factor (toxic inhibition) for the biological treatment of toxic, hazardous, or radioactive mixed wastes and suggests that drip-feed bioreactors could be used to treat other concentrated toxic waste streams, such as chemical warfare materiel.

A new calcineurin inhibition domain in Cabin1

International Nuclear Information System (INIS)

Jang, Hyonchol; Cho, Eun-Jung; Youn, Hong-Duk

2007-01-01

Calcineurin (CN), a calcium-activated phosphatase, plays a critical role in various biological processes including T cell activation. Cabin1, a calcineurin binding protein 1, has been shown to bind directly to CN using its C-terminal region and inhibit CN activity. However, no increase in CN activity has been found in Cabin1ΔC T cells, which produce a truncated Cabin1 lacking the C-terminal CN binding region. Here, we report that Cabin1 has additional CN binding domain in its 701-900 amino acid residues. Cabin1 (701-900) blocked both CN-mediated dephosphorylation and nuclear import of NFAT and thus inhibited IL-2 production in response to PMA/ionomycin stimulation. This fact may explain why Cabin1ΔC mice previously showed no significant defect in CN-mediated signaling pathway

MicroRNA-223 Targeting STIM1 Inhibits the Biological Behavior of Breast Cancer

Directory of Open Access Journals (Sweden)

Yanfang Yang

2018-01-01

Full Text Available Background/Aims: To investigate the cellular effects and clinical significance of microRNA-223 (miR-223 in breast cancer by targeting stromal interaction molecule1 (STIM1. Methods: Breast cancer cell lines (T47D, MCF-7, SKB-R3, MDA-MB-231 and MDA-MB-435 and a normal breast epithelial cell line (MCF-10A were prepared for this study. MiR-223 mimics, anti-miR-223 and pcDNA 3.1-STIM1 were transiently transfected into cancer cells independently or together, and then RT-qPCR was performed to detect the expressions of miR-223 and STIM1 mRNA, dual-luciferase reporter assay was conducted to examine the effects of miR-223 on STIM1, Western blotting was used to measure the expressions of the STIM1 proteins, MTT and Trans-well assays were performed to detect cell proliferation and invasion. Finally, the correlation of miR-223 and STIM1 was investigated by detecting with ISH and IHC in breast cancer specimens or the corresponding adjacent normal tissues. Results: Compared with normal cells and tissues, breast cancer tissues and cells exhibited significantly lower expression of miR-223, but higher expression of STIM1. MiR-223 could inhibit the proliferation and invasiveness of breast cancer cells by negatively regulating the expressions of STIM1. Reimplantation with STIM1 partially rescued the miRNA-223-induced inhibition of breast cancer cells. Clinical data revealed that high expression of STIM1 and miR-223 was respectively detrimental and beneficial factor impacting patient’s disease-free survival (DFS rather than overall survival (OS. Moreover, Pearson correlation analysis also confirmed that STIM1 was inversely correlated with miR-223. Conclusion: MiR-223 inhibits the proliferation and invasion of breast cancer by targeting STIM1. The miR-223/STIM1 axis could possibly be a potential therapeutic target for treating breast cancer patients.

[Effects of organic and inorganic fertilizers on emission and sources of N2O in vegetable soils.

Science.gov (United States)

Lin, Wei; Ding, Jun Jun; Li, Yu Zhong; Xu, Chun Ying; Li, Qiao Zhen; Zheng, Qian; Zhuang, Shan

2018-05-01

To clarify the microbial pathway of the N 2 O production and consumption under different fertilizers and provide theoretical basis for the reduction of N 2 O emission and rational management of fertilization in vegetable soils, we examined dynamics of N 2 O flux and isotope signatures under different fertilizer treatments in the vegetable soils of Beijing, by setting up four treatments (organic-acetylene, organic-nonacetylene, inorganic-acetylene, inorganic-nonacetylene) and using the stable isotope technique of natural N 2 O abundance. The results showed that the cumulative N 2 O emission from organic-acetylene group, organic-nonacetylene group, inorganic-acetylene group and inorganic-nonacetylene group was (374±37), (283±34), (458±36), (355±41) g·m -2 in cabbage growing season, respectively. N 2 O fluxes were significantly lower in treatments with organic fertilizer than those with inorganic fertilizer and significantly higher in acetylene group than nonacetylene group. The degree of N 2 O reduction were similar in both fertilizer treatments, and higher nitrification was found in inorganic fertilizer than organic fertilizer treatments. Acetylene only inhibited partial nitrification and partial N 2 O reduction at the peak of N 2 O emission. When the emission was reduced, N 2 O reduction could be completely suppressed. Therefore, the inorganic fertilizer might trigger nitrification and promote higher N 2 O emission. The high concentration of N 2 O could withstand that acetylene to inhibite N 2 O reduction. Hence, using organic fertilizers instead of some inorganic ones could effectively reduce N 2 O emission in vegetable soils of Beijing. The N 2 O concentration threshold should be considered when we identify N 2 O source by acetylene inhibition method.

Furan- and Thiophene-2-Carbonyl Amino Acid Derivatives Activate Hypoxia-Inducible Factor via Inhibition of Factor Inhibiting Hypoxia-Inducible Factor-1

Directory of Open Access Journals (Sweden)

Shin-ichi Kawaguchi

2018-04-01

Full Text Available Induction of a series of anti-hypoxic proteins protects cells during exposure to hypoxic conditions. Hypoxia-inducible factor-α (HIF-α is a major transcription factor that orchestrates this protective effect. To activate HIF exogenously, without exposing cells to hypoxic conditions, many small-molecule inhibitors targeting prolyl hydroxylase domain-containing protein have been developed. In addition, suppression of factor inhibiting HIF-1 (FIH-1 has also been shown to have the potential to activate HIF-α. However, few small-molecule inhibitors of FIH-1 have been developed. In this study, we synthesized a series of furan- and thiophene-2-carbonyl amino acid derivatives having the potential to inhibit FIH-1. The inhibitory activities of these compounds were evaluated in SK-N-BE(2c cells by measuring HIF response element (HRE promoter activity. Several furan- and thiophene-2-carbonyl amino acid derivatives inhibited FIH-1 based on correlations among the docking score of the FIH-1 active site, the chemical structure of the compounds, and biological HIF-α/HRE transcriptional activity.

Systems Biology Graphical Notation: Entity Relationship language Level 1 Version 2.

Science.gov (United States)

Sorokin, Anatoly; Le Novère, Nicolas; Luna, Augustin; Czauderna, Tobias; Demir, Emek; Haw, Robin; Mi, Huaiyu; Moodie, Stuart; Schreiber, Falk; Villéger, Alice

2015-09-04

The Systems Biological Graphical Notation (SBGN) is an international community effort for standardized graphical representations of biological pathways and networks. The goal of SBGN is to provide unambiguous pathway and network maps for readers with different scientific backgrounds as well as to support efficient and accurate exchange of biological knowledge between different research communities, industry, and other players in systems biology. Three SBGN languages, Process Description (PD), Entity Relationship (ER) and Activity Flow (AF), allow for the representation of different aspects of biological and biochemical systems at different levels of detail. The SBGN Entity Relationship language (ER) represents biological entities and their interactions and relationships within a network. SBGN ER focuses on all potential relationships between entities without considering temporal aspects. The nodes (elements) describe biological entities, such as proteins and complexes. The edges (connections) provide descriptions of interactions and relationships (or influences), e.g., complex formation, stimulation and inhibition. Among all three languages of SBGN, ER is the closest to protein interaction networks in biological literature and textbooks, but its well-defined semantics offer a superior precision in expressing biological knowledge.

Epistemological Syncretism in a Biology Classroom: A Case Study

Science.gov (United States)

Bennett, William D.; Park, Soonhye

2011-01-01

In teaching science, the beliefs of teachers may come into conflict and inhibit the implementation of reformed teaching practice. An experienced biology teacher, Mr. Hobbs, was found to have two different sets of epistemological beliefs while his classroom practice was predominantly teacher-centered. A case study was then performed in order to…

Halide Binding and Inhibition of Laccase Copper Clusters: The Role of Reorganization Energy

DEFF Research Database (Denmark)

Kepp, Kasper Planeta

2015-01-01

Laccase-like proteins are multicopper oxidases involved in several biological and industrial processes. Their application is commonly limited due to inhibition by fluoride and chloride, and as-isolated proteins are often substantially activated by heat, suggesting that multiple redox states can c...

Mechanisms of caffeine-induced inhibition of UVB carcinogenesis

Directory of Open Access Journals (Sweden)

Allan H Conney

2013-06-01

Full Text Available Sunlight-induced nonmelanoma skin cancer is the most prevalent cancer in the United States with more than 2 million cases per year. Several studies have shown an inhibitory effect of caffeine administration on UVB-induced skin cancer in mice, and these studies are paralleled by epidemiology studies that indicate an inhibitory effect of coffee drinking on nonmelanoma skin cancer in humans. Strikingly, decaffeinated coffee consumption had no such inhibitory effect.Mechanism studies indicate that caffeine has a sunscreen effect that inhibits UVB-induced formation of thymine dimers and sunburn lesions in the epidermis of mice. In addition, caffeine administration has a biological effect that enhances UVB-induced apoptosis thereby enhancing the elimination of damaged precancerous cells, and caffeine administration also enhances apoptosis in tumors. Caffeine administration enhances UVB-induced apoptosis by p53-dependent and p53-independent mechanisms. Exploration of the p53-independent effect indicated that caffeine administration enhanced UVB-induced apoptosis by inhibiting the UVB-induced increase in ATR-mediated formation of phospho-Chk1 (Ser345 and abolishing the UVB-induced decrease in cyclin B1 which resulted in caffeine-induced premature and lethal mitosis in mouse skin. In studies with cultured primary human keratinocytes, inhibition of ATR with siRNA against ATR inhibited Chk1 phosphorylation and enhanced UVB-induced apoptosis. Transgenic mice with decreased epidermal ATR function that were irradiated chronically with UVB had 69% fewer tumors at the end of the study compared with irradiated littermate controls with normal ATR function. These results, which indicate that genetic inhibition of ATR (like pharmacologic inhibition of ATR via caffeine inhibits UVB-induced carcinogenesis and supports the concept that ATR-mediated phosphorylation of Chk1 is an important target for caffeine’s inhibitory effect on UVB-induced carcinogenesis.

Water SA - Vol 30, No 5 (2004)

African Journals Online (AJOL)

The search for Cryptosporidiumoocysts and Giardia cystsin source water used ... Full-scale implementation of external nitrification biological nutrient removal at the ... from land to the marine environment: A water quality management perspective ... Integrated water resource planning in the city of Cape Town · EMAIL FREE ...

Source Tracking of Nitrous Oxide using A Quantum Cascade Laser System in the Field and Laboratory Environments

Science.gov (United States)

Nitrous oxide is an important greenhouse gas and ozone depleting substance. Nitrification and denitrification are two major biological pathways that are responsible for soil emissions of N2O. However, source tracking of in-situ or laboratory N2O production is still challenging to...

Bragg Curve, Biological Bragg Curve and Biological Issues in Space Radiation Protection with Shielding

Science.gov (United States)

Honglu, Wu; Cucinotta, F.A.; Durante, M.; Lin, Z.; Rusek, A.

2006-01-01

The space environment consists of a varying field of radiation particles including high-energy ions, with spacecraft shielding material providing the major protection to astronauts from harmful exposure. Unlike low-LET gamma or X-rays, the presence of shielding does not always reduce the radiation risks for energetic charged particle exposure. Since the dose delivered by the charged particle increases sharply as the particle approaches the end of its range, a position known as the Bragg peak, the Bragg curve does not necessarily represent the biological damage along the particle traversal since biological effects are influenced by the track structure of both primary and secondary particles. Therefore, the biological Bragg curve is dependent on the energy and the type of the primary particle, and may vary for different biological endpoints. To achieve a Bragg curve distribution, we exposed cells to energetic heavy ions with the beam geometry parallel to a monolayer of fibroblasts. Qualitative analyses of gamma-H2AX fluorescence, a known marker of DSBs, indicated increased clustering of DNA damage before the Bragg peak, enhanced homogenous distribution at the peak, and provided visual evidence of high linear energy transfer (LET) particle traversal of cells beyond the Bragg peak. A quantitative biological response curve generated for micronuclei (MN) induction across the Bragg curve did not reveal an increased yield of MN at the location of the Bragg peak. However, the ratio of mono-to bi-nucleated cells, which indicates inhibition in cell progression, increased at the Bragg peak location. These results, along with other biological concerns, show that space radiation protection with shielding can be a complicated issue.

Caffeine Inhibits Acetylcholinesterase, But Not Butyrylcholinesterase

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Petr Dobes

2013-05-01

Full Text Available Caffeine is an alkaloid with a stimulant effect in the body. It can interfere in transmissions based on acetylcholine, epinephrine, norepinephrine, serotonin, dopamine and glutamate. Clinical studies indicate that it can be involved in the slowing of Alzheimer disease pathology and some other effects. The effects are not well understood. In the present work, we focused on the question whether caffeine can inhibit acetylcholinesterase (AChE and/or, butyrylcholinesterase (BChE, the two enzymes participating in cholinergic neurotransmission. A standard Ellman test with human AChE and BChE was done for altering concentrations of caffeine. The test was supported by an in silico examination as well. Donepezil and tacrine were used as standards. In compliance with Dixon’s plot, caffeine was proved to be a non-competitive inhibitor of AChE and BChE. However, inhibition of BChE was quite weak, as the inhibition constant, Ki, was 13.9 ± 7.4 mol/L. Inhibition of AChE was more relevant, as Ki was found to be 175 ± 9 µmol/L. The predicted free energy of binding was −6.7 kcal/mol. The proposed binding orientation of caffeine can interact with Trp86, and it can be stabilize by Tyr337 in comparison to the smaller Ala328 in the case of human BChE; thus, it can explain the lower binding affinity of caffeine for BChE with reference to AChE. The biological relevance of the findings is discussed.

Solid respirometry to characterize nitrification kinetics: a better insight for modelling nitrogen conversion in vertical flow constructed wetlands.

Science.gov (United States)

Morvannou, Ania; Choubert, Jean-Marc; Vanclooster, Marnik; Molle, Pascal

2011-10-15

We developed an original method to measure nitrification rates at different depths of a vertical flow constructed wetland (VFCW) with variable contents of organic matter (sludge, colonized gravel). The method was adapted for organic matter sampled in constructed wetland (sludge, colonized gravel) operated under partially saturated conditions and is based on respirometric principles. Measurements were performed on a reactor, containing a mixture of organic matter (sludge, colonized gravel) mixed with a bulking agent (wood), on which an ammonium-containing liquid was applied. The oxygen demand was determined from analysing oxygen concentration of the gas passing through the reactor with an on-line analyzer equipped with a paramagnetic detector. Within this paper we present the overall methodology, the factors influencing the measurement (sample volume, nature and concentration of the applied liquid, number of successive applications), and the robustness of the method. The combination of this new method with a mass balance approach also allowed determining the concentration and maximum growth rate of the autotrophic biomass in different layers of a VFCW. These latter parameters are essential inputs for the VFCW plant modelling. Copyright © 2011 Elsevier Ltd. All rights reserved.

Long-term operation of oxygen-limiting membrane bioreactor (MBR) for the development of simultaneous partial nitrification, anammox and denitrification (SNAD) process.

Science.gov (United States)

Zhao, Chuanqi; Wang, Gang; Xu, Xiaochen; Yang, Yuesuo; Yang, Fenglin

2017-07-18

In this study, an oxygen-limiting membrane bioreactor (MBR) with recirculation of biogas for relieving membrane fouling was successfully operated to realize the simultaneous partial nitrification, anammox and denitrification (SNAD) process. The MBR operation was considered effective in the long-term test with total nitrogen (TN) and chemical oxygen demand (COD) removal efficiencies of 94.86% and 98.91%, respectively. Membrane fouling was significantly alleviated due to the recirculation of biogas and the membrane had been cleaned four times with a normal filtration period of 52 days. The co-existence of ammonia-oxidizing bacteria (AOB), anammox and denitrifying bacteria in MBR was confirmed by scanning electron microscopy (SEM) and fluorescence in situ hybridizations (FISH) analysis. Furthermore, AOB were found close to the granule surface, while denitrifying bacteria and anammox were in the deeper layer of granules. Potential in excellent TN and COD removal, operational stability and sustainability, as well as in alleviating membrane fouling is expected by using this oxygen-limiting MBR.

Essential Oils from Thyme (Thymus vulgaris): Chemical Composition and Biological Effects in Mouse Model.

Science.gov (United States)

Vetvicka, Vaclav; Vetvickova, Jana

2016-12-01

Thymus species are popular spices and contain volatile oils as main chemical constituents. Recently, plant-derived essential oils are gaining significant attention due to their significant biological activities. Seven different thymus-derived essential oils were compared in our study. First, we focused on their chemical composition, which was followed up by testing their effects on phagocytosis, cytokine production, chemotaxis, edema inhibition, and liver protection. We found limited biological activities among tested oils, with no correlation between composition and biological effects. Similarly, no oils were effective in every reaction. Based on our data, the tested biological use of these essential oils is questionable.

Inhibitory effect of a Brazilian marine brown alga Spatoglossum schröederi on biological activities of Lachesis muta snake venom

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Thaisa Francielle Souza Domingos

2012-04-01

Full Text Available The ability of crude extracts of the brown seaweed Spatoglossum schröederi to counteract some of the biological activities of Lachesis muta snake venom was evaluated. In vitro assays showed that only the extract of S. schröederi prepared in ethyl acetate was able to inhibit the clotting of fibrinogen induced by L. muta venom. On the other hand, all extracts were able to inhibit partially the hemolysis caused by venom and those prepared in dichloromethane or ethyl acetate fully neutralized the proteolysis and hemorrhage produced by the venom. Moreover, the dichloromethane or ethyl acetate extracts inhibited the hemolysis induced by an isolated phospholipase A2 from L. muta venom, called LM-PLA2-I. In contrast, the hexane extract failed to protect mice from hemorrhage or to inhibit proteolysis and clotting. These results show that the polarity of the solvent used to prepare the extracts of S. schröederi algae influenced the potency of the inhibitory effect of the biological activities induced by L. muta venom. Thus, the seaweed S. schröederi may be a promising source of natural inhibitors of the enzymes involved in biological activities of L. muta venom.

Production of a biological surfactant

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N. Gladys Rosero

2002-01-01

Full Text Available This paper summarizes the scale up work performed at the Colombian Petroleum Institute on a process to produce at pilot plant level a biosurfactant of the rhamnolipid type. By examination of both the activation conditions of the microorganism and design aspects of the broth, a stable condition was achieved which consistently triggers the production mechanisms and thus it was obtained a significant increment in biosurfactant productivity. The biological surfactant exhibited high efficiency in applications such as hydrocarbon biodegradation in saline environments, corrosion inhibition, and crude oil recovery from storage tank bottom sludges.

Pyruvic oxime nitrification and copper and nickel resistance by a Cupriavidus pauculus, an active heterotrophic nitrifier-denitrifier.

Science.gov (United States)

Ramirez, Miguel; Obrzydowski, Jennifer; Ayers, Mary; Virparia, Sonia; Wang, Meijing; Stefan, Kurtis; Linchangco, Richard; Castignetti, Domenic

2014-01-01

Heterotrophic nitrifiers synthesize nitrogenous gasses when nitrifying ammonium ion. A Cupriavidus pauculus, previously thought an Alcaligenes sp. and noted as an active heterotrophic nitrifier-denitrifier, was examined for its ability to produce nitrogen gas (N2) and nitrous oxide (N2O) while heterotrophically nitrifying the organic substrate pyruvic oxime [CH3-C(NOH)-COOH]. Neither N2 nor N2O were produced. Nucleotide and phylogenetic analyses indicated that the organism is a member of a genus (Cupriavidus) known for its resistance to metals and its metabolism of xenobiotics. The microbe (a Cupriavidus pauculus designated as C. pauculus strain UM1) was examined for its ability to perform heterotrophic nitrification in the presence of Cu(2+) and Ni(2+) and to metabolize the xenobiotic phenol. The bacterium heterotrophically nitrified well when either 1 mM Cu(2+) or 0.5 mM Ni(2+) was present in either enriched or minimal medium. The organism also used phenol as a sole carbon source in either the presence or absence of 1 mM Cu(2+) or 0.5 mM Ni(2+). The ability of this isolate to perform a number of different metabolisms, its noteworthy resistance to copper and nickel, and its potential use as a bioremediation agent are discussed.

The isothiocyanate class of bioactive nutrients covalently inhibit the MEKK1 protein kinase

Directory of Open Access Journals (Sweden)

Macdonald Timothy L

2007-09-01

Full Text Available Abstract Background Dietary isothiocyanates (ITCs are electrophilic compounds that have diverse biological activities including induction of apoptosis and effects on cell cycle. They protect against experimental carcinogenesis in animals, an activity believed to result from the transcriptional induction of "Phase 2" enzymes. The molecular mechanism of action of ITCs is unknown. Since ITCs are electrophiles capable of reacting with sulfhydryl groups on amino acids, we hypothesized that ITCs induce their biological effects through covalent modification of proteins, leading to changes in cell regulatory events. We previously demonstrated that stress-signaling kinase pathways are inhibited by other electrophilic compounds such as menadione. We therefore tested the effects of nutritional ITCs on MEKK1, an upstream regulator of the SAPK/JNK signal transduction pathway. Methods The activity of MEKK1 expressed in cells was monitored using in vitro kinase assays to measure changes in catalytic activity. The activity of endogenous MEKK1, immunopurified from ITC treated and untreated LnCAP cells was also measured by in vitro kinase assay. A novel labeling and affinity reagent for detection of protein modification by ITCs was synthesized and used in competition assays to monitor direct modification of MEKK1 by ITC. Finally, immunoblots with phospho-specific antibodies were used to measure the activity of MAPK protein kinases. Results ITCs inhibited the MEKK1 protein kinase in a manner dependent on a specific cysteine residue in the ATP binding pocket. Inhibition of MEKK1 catalytic activity was due to direct, covalent and irreversible modification of the MEKK1 protein itself. In addition, ITCs inhibited the catalytic activity of endogenous MEKK1. This correlated with inhibition of the downstream target of MEKK1 activity, i.e. the SAPK/JNK kinase. This inhibition was specific to SAPK, as parallel MAPK pathways were unaffected. Conclusion These results

Biological treatment of concentrated hazardous, toxic, and radionuclide mixed wastes without dilution

International Nuclear Information System (INIS)

Stringfellow, William T.; Komada, Tatsuyuki; Chang, Li-Yang

2004-01-01

Approximately 10 percent of all radioactive wastes produced in the U. S. are mixed with hazardous or toxic chemicals and therefore can not be placed in secure land disposal facilities. Mixed wastes containing hazardous organic chemicals are often incinerated, but volatile radioactive elements are released directly into the biosphere. Some mixed wastes do not currently have any identified disposal option and are stored locally awaiting new developments. Biological treatment has been proposed as a potentially safer alternative to incineration for the treatment of hazardous organic mixed wastes, since biological treatment would not release volatile radioisotopes and the residual low-level radioactive waste would no longer be restricted from land disposal. Prior studies have shown that toxicity associated with acetonitrile is a significant limiting factor for the application of biotreatment to mixed wastes and excessive dilution was required to avoid inhibition of biological treatment. In this study, we demonstrate that a novel reactor configuration, where the concentrated toxic waste is drip-fed into a complete-mix bioreactor containing a pre-concentrated active microbial population, can be used to treat a surrogate acetonitrile mixed waste stream without excessive dilution. Using a drip-feed bioreactor, we were able to treat a 90,000 mg/L acetonitrile solution to less than 0.1 mg/L final concentration using a dilution factor of only 3.4. It was determined that the acetonitrile degradation reaction was inhibited at a pH above 7.2 and that the reactor could be modeled using conventional kinetic and mass balance approaches. Using a drip-feed reactor configuration addresses a major limiting factor (toxic inhibition) for the biological treatment of toxic, hazardous, or radioactive mixed wastes and suggests that drip-feed bioreactors could be used to treat other concentrated toxic waste streams, such as chemical warfare materiel

Irisin inhibition of growth hormone secretion in cultured tilapia pituitary cells.

Science.gov (United States)

Lian, Anji; Li, Xin; Jiang, Quan

2017-01-05

Irisin, the product of fibronectin type III domain-containing protein 5 (FNDC5) gene, is well-documented to be a regulator of energy metabolism. At present, not much is known about its biological function in non-mammalian species. In this study, a full-length tilapia FDNC5 was cloned and its tissue expression pattern has been confirmed. Based on the sequence obtained, we produced and purified recombinant irisin which could induce uncoupling protein 1 (UCP1) gene expression in tilapia hepatocytes. Further, the rabbit polyclonal irisin antiserum was produced and its specificity was confirmed by antiserum preabsorption. In tilapia pituitary cells, irisin inhibited growth hormone (GH) gene expression and secretion and triggered rapid phosphorylation of Akt, Erk1/2, and p38 MAPK. Furthermore, irisin-inhibited GH mRNA expression could be prevented by inhibiting PI3K/Akt, MEK1/2, and p38 MAPK, respectively. Apparently, fish irisin can act directly at the pituitary level to inhibit GH transcript expression via multiple signaling pathways. Copyright © 2016 Elsevier Ireland Ltd. All rights reserved.

Study of the inhibition of respiration/fermentation in yeast cells by sodium fluoride

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López Pérez, José Pedro

2013-01-01

Full Text Available This paper presents the necessary guidelines to achieve the observation of the inhibition of sugar metabolism in yeast cells by means of the compound sodium fluoride. This activity is appropriate for the subject of Biology in Secondary Education as well as High School.

Development of Carbocyanine Dyes for PRMT Inhibition and Imaging

Science.gov (United States)

Sinha, Sarmistha Halder; Owens, Eric A.; Feng, You; Yang, Yutao; Xie, Yan; Tu, Yaping; Henary, Maged; Zheng, Yujun George

2014-01-01

Summary Protein arginine methylation regulates multiple biological processes. Deregulation of protein arginine methyltransferase (PRMT) activities has been observed in many disease phenotypes. Small molecule probes that target PRMTs with strong affinity and selectivity can be used as valuable tools to dissect biological mechanisms of arginine methylation and establish the role of PRMT proteins in a disease process. In this work, we report synthesis and evaluation of a class of carbocyanine compounds containing indolium, benz[e]indolium or benz[c,d]indolium heterocyclic moieties that bind to the predominant arginine methyltransferase PRMT1 and inhibit its methyltransferase activity at low micromolar potencies. In particular, the developed molecules have long wavelength colorimetric and fluorometric photoactivities, which can be used for optical and near-infrared fluorescence imaging in cells or biological tissues. Together, these new chemical probes have potential application in PRMT studies both as enzyme inhibitors and as fluorescent dyes for microscope imaging. PMID:22749641

Synthesis, Biological Evaluation, and Docking Studies of Novel Bisquaternary Aldoxime Reactivators on Acetylcholinesterase and Butyrylcholinesterase Inhibited by Paraoxon

Directory of Open Access Journals (Sweden)

Kamil Kuca

2018-05-01

Full Text Available Nerve agents and oxon forms of organophosphorus pesticides act as strong irreversible inhibitors of two cholinesterases in the human body: acetylcholinesterase (AChE; EC 3.1.1.7 and butyrylcholinesterase (BChE; EC 3.1.1.8, and are therefore highly toxic compounds. For the recovery of inhibited AChE, antidotes from the group of pyridinium or bispyridinium aldoxime reactivators (pralidoxime, obidoxime, HI-6 are used in combination with anticholinergics and anticonvulsives. Therapeutic efficacy of reactivators (called “oximes” depends on their chemical structure and also the type of organophosphorus inhibitor. Three novel oximes (K131, K142, K153 with an oxime group in position four of the pyridinium ring were designed and then tested for their potency to reactivate human (Homo sapiens sapiens AChE (HssACHE and BChE (HssBChE inhibited by the pesticide paraoxon (diethyl 4-nitrophenyl phosphate. According to the obtained results, none of the prepared oximes were able to satisfactorily reactivate paraoxon-inhibited cholinesterases. On the contrary, extraordinary activity of obidoxime in the case of paraoxon-inhibited HssAChE reactivation was confirmed. Additional docking studies pointed to possible explanations for these results.

Self-inhibition can limit biologically enhanced TCE dissolution from a TCE DNAPL.

Science.gov (United States)

Haest, P J; Springael, D; Seuntjens, P; Smolders, E

2012-11-01

Biodegradation of trichloroethene (TCE) near a Dense Non Aqueous Phase Liquid (DNAPL) can enhance the dissolution rate of the DNAPL by increasing the concentration gradient at the DNAPL-water interface. Two-dimensional flow-through sand boxes containing a TCE DNAPL and inoculated with a TCE dechlorinating consortium were set up to measure this bio-enhanced dissolution under anaerobic conditions. The total mass of TCE and daughter products in the effluent of the biotic boxes was 3-6 fold larger than in the effluent of the abiotic box. However, the mass of daughter products only accounted for 19-55% of the total mass of chlorinated compounds in the effluent, suggesting that bio-enhanced dissolution factors were maximally 1.3-2.2. The enhanced dissolution most likely primarily resulted from variable DNAPL distribution rather than biodegradation. Specific dechlorination rates previously determined in a stirred liquid medium were used in a reactive transport model to identify the rate limiting factors. The model adequately simulated the overall TCE degradation when predicted resident microbial numbers approached observed values and indicated an enhancement factor for TCE dissolution of 1.01. The model shows that dechlorination of TCE in the 2D box was limited due to the short residence time and the self-inhibition of the TCE degradation. A parameter sensitivity analysis predicts that the bio-enhanced dissolution factor for this TCE source zone can only exceed a value of 2 if the TCE self-inhibition is drastically reduced (when a TCE tolerant dehalogenating community is present) or if the DNAPL is located in a low-permeable layer with a small Darcy velocity. Copyright © 2012 Elsevier Ltd. All rights reserved.

Azadirachtin Interacts with the Tumor Necrosis Factor (TNF) Binding Domain of Its Receptors and Inhibits TNF-induced Biological Responses*

Science.gov (United States)

Thoh, Maikho; Kumar, Pankaj; Nagarajaram, Hampathalu A.; Manna, Sunil K.

2010-01-01

The role of azadirachtin, an active component of a medicinal plant Neem (Azadirachta indica), on TNF-induced cell signaling in human cell lines was investigated. Azadirachtin blocks TNF-induced activation of nuclear factor κB (NF-κB) and also expression of NF-κB-dependent genes such as adhesion molecules and cyclooxygenase 2. Azadirachtin inhibits the inhibitory subunit of NF-κB (IκBα) phosphorylation and thereby its degradation and RelA (p65) nuclear translocation. It blocks IκBα kinase (IKK) activity ex vivo, but not in vitro. Surprisingly, azadirachtin blocks NF-κB DNA binding activity in transfected cells with TNF receptor-associated factor (TRAF)2, TNF receptor-associated death domain (TRADD), IKK, or p65, but not with TNFR, suggesting its effect is at the TNFR level. Azadirachtin blocks binding of TNF, but not IL-1, IL-4, IL-8, or TNF-related apoptosis-inducing ligand (TRAIL) with its respective receptors. Anti-TNFR antibody or TNF protects azadirachtin-mediated down-regulation of TNFRs. Further, in silico data suggest that azadirachtin strongly binds in the TNF binding site of TNFR. Overall, our data suggest that azadirachtin modulates cell surface TNFRs thereby decreasing TNF-induced biological responses. Thus, azadirachtin exerts an anti-inflammatory response by a novel pathway, which may be beneficial for anti-inflammatory therapy. PMID:20018848

Azadirachtin interacts with the tumor necrosis factor (TNF) binding domain of its receptors and inhibits TNF-induced biological responses.

Science.gov (United States)

Thoh, Maikho; Kumar, Pankaj; Nagarajaram, Hampathalu A; Manna, Sunil K

2010-02-19

The role of azadirachtin, an active component of a medicinal plant Neem (Azadirachta indica), on TNF-induced cell signaling in human cell lines was investigated. Azadirachtin blocks TNF-induced activation of nuclear factor kappaB (NF-kappaB) and also expression of NF-kappaB-dependent genes such as adhesion molecules and cyclooxygenase 2. Azadirachtin inhibits the inhibitory subunit of NF-kappaB (IkappaB alpha) phosphorylation and thereby its degradation and RelA (p65) nuclear translocation. It blocks IkappaB alpha kinase (IKK) activity ex vivo, but not in vitro. Surprisingly, azadirachtin blocks NF-kappaB DNA binding activity in transfected cells with TNF receptor-associated factor (TRAF)2, TNF receptor-associated death domain (TRADD), IKK, or p65, but not with TNFR, suggesting its effect is at the TNFR level. Azadirachtin blocks binding of TNF, but not IL-1, IL-4, IL-8, or TNF-related apoptosis-inducing ligand (TRAIL) with its respective receptors. Anti-TNFR antibody or TNF protects azadirachtin-mediated down-regulation of TNFRs. Further, in silico data suggest that azadirachtin strongly binds in the TNF binding site of TNFR. Overall, our data suggest that azadirachtin modulates cell surface TNFRs thereby decreasing TNF-induced biological responses. Thus, azadirachtin exerts an anti-inflammatory response by a novel pathway, which may be beneficial for anti-inflammatory therapy.

Biological control of fusarium wilt of tomato by antagonist fungi and ...

African Journals Online (AJOL)

Biological control of Fusarium oxysporum f. sp. lycopersici (FOL) causing wilt disease of tomato was studied in vitro as well as under pot conditions. Dual culture technique showed that Aspergillus niger, Penicillium citrinum, Penicillium sp. and Trichoderma harzianum inhibited the radial colony growth of the test pathogen.

Waste water treatment: new procesos, new mentality. Depuracion de agua residual: nuevos procesos, nueva mentalidad

Energy Technology Data Exchange (ETDEWEB)

Cortacans, J.A. (Infilco Espanola (Spain))

1994-01-01

The biological nitrification-denitrification processes require, for a correct design, en adequate consideration of several parameters, which in conventional processes are not so significant: sludge age, temperature, alkalinity, BOD5/TKN ratio, readily biodegradable fraction of the organic matter, etc. This is the key for a right solution. (Author)

Biological Therapy in Systemic Lupus Erythematosus

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Mariana Postal

2012-01-01

Full Text Available Systemic lupus erythematosus (SLE is a prototypic inflammatory autoimmune disorder characterized by multisystem involvement and fluctuating disease activity. Symptoms range from rather mild manifestations such as rash or arthritis to life-threatening end-organ manifestations. Despite new and improved therapy having positively impacted the prognosis of SLE, a subgroup of patients do not respond to conventional therapy. Moreover, the risk of fatal outcomes and the damaging side effects of immunosuppressive therapies in SLE call for an improvement in the current therapeutic management. New therapeutic approaches are focused on B-cell targets, T-cell downregulation and costimulatory blockade, cytokine inhibition, and the modulation of complement. Several biological agents have been developed, but this encouraging news is associated with several disappointments in trials and provide a timely moment to reflect on biologic therapy in SLE.

Physical biological coupling in the Pearl River Estuary

Science.gov (United States)

Harrison, Paul J.; Yin, Kedong; Lee, J. H. W.; Gan, Jianping; Liu, Hongbin

2008-07-01

The Pearl River Estuary is a subtropical estuary and the second largest in China based on discharge volume from the Pearl River. Processes in the estuary vary spatially and temporally (wet vs dry season). In the dry season at the head of the estuary, hypoxic and nearly anoxic conditions occur and NH 4 reaches >600 μM, NO 3 is ˜300 μM and nitrite is ˜60 μM indicating that nitrification and denitrification may be important dry season processes in the region extending 40 km upstream of the Humen outlet. There are very few biological studies conducted in this upper section of the estuary in either the dry or wet seasons and hence there is a need for further research in this region of the river. In the wet season, the salinity wedge extends to the Hongqimen outlet and oxygen is low (35-80% saturation). Nitrate is ˜100 μM, silicate ˜140 μM; and phosphate is relatively low at ˜0.5 μM, yielding an N:P ratio up to ˜200:1 in summer. Nutrients decrease in the lower estuary and primary productivity may become potentially P-limited. Eutrophication is not as severe as one would expect from the nutrient inputs from the Pearl River and from Hong Kong's sewage discharge. This estuary shows a remarkable capacity to cope with excessive nutrients. Physical processes such as river discharge, tidal flushing, turbulent dispersion, wind-induced mixing, and estuarine circulation play an important role in controlling the production and accumulation of algal blooms and the potential occurrence of hypoxia. Superimposed on the physical processes of the estuary are the chemical and biological processes involved in the production of the bloom. For example, the 100N:1P ratio indicates that P potentially limits the amount of algal biomass (and potential biological oxygen demand) in summer. While extended periods of hypoxia are rare in Hong Kong waters, episodic events have been reported to occur during late summer due to factors such as low wind, high rainfall and river discharge which

Chemoradiotherapy and molecular biology

International Nuclear Information System (INIS)

Hasegawa, Masatoshi; Mitsuhashi, Norio; Niibe, Hideo

2000-01-01

The current status of chemoradiotherapy was reviewed from the standpoint of molecular biology. Chemoradiotherapy was conducted to achieve systemic tumor control, to intensify the response to irradiation, and to reduce adverse reactions. The mechanisms of the efficacy of chemoradiotherapy were: modification of dose-response relationships, inhibition of tumor cell recovery from sublethal damage or potential lethal damage, effects on cell dynamics and the cell cycle, improvement of blood flow or reoxygenation, recruitment, improvement of drug uptake, increased cell damage. Cell death (necrosis and apoptosis) and cancer-related genes were described, as the essential points, because they are involved in the response to chemoradiotherapy. Cisplatin (platinum compound), 5-fluorouracil, etoposide, and taxoid (paclitaxel, docetaxel) were the principal anticancer agents used for chemoradiotherapy, and they enhanced the effects of irradiation. However, even when good responses or synergism between anticancer drug and radiotherapy was observed in in vitro studies, there was little therapeutic advantage clinically. Data from in vitro and in vivo studies should be collected and systemized, and ''molecular biology in chemotherapy'' that can be applied clinically may become established. (K.H.)

Biological interaction of living cells with COSAN-based synthetic vesicles.

Science.gov (United States)

Tarrés, Màrius; Canetta, Elisabetta; Paul, Eleanor; Forbes, Jordan; Azzouni, Karima; Viñas, Clara; Teixidor, Francesc; Harwood, Adrian J

2015-01-15

Cobaltabisdicarbollide (COSAN) [3,3'-Co(1,2-C2B9H11)2](-), is a complex boron-based anion that has the unusual property of self-assembly into membranes and vesicles. These membranes have similar dimensions to biological membranes found in cells, and previously COSAN has been shown to pass through synthetic lipid membranes and those of living cells without causing breakdown of membrane barrier properties. Here, we investigate the interaction of this inorganic membrane system with living cells. We show that COSAN has no immediate effect on cell viability, and cells fully recover when COSAN is removed following exposure for hours to days. COSAN elicits a range of cell biological effects, including altered cell morphology, inhibition of cell growth and, in some cases, apoptosis. These observations reveal a new biology at the interface between inorganic, synthetic COSAN membranes and naturally occurring biological membranes.

Human-Phosphate-Binding-Protein inhibits HIV-1 gene transcription and replication

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Candolfi Ermanno

2011-07-01

Full Text Available Abstract The Human Phosphate-Binding protein (HPBP is a serendipitously discovered lipoprotein that binds phosphate with high affinity. HPBP belongs to the DING protein family, involved in various biological processes like cell cycle regulation. We report that HPBP inhibits HIV-1 gene transcription and replication in T cell line, primary peripherical blood lymphocytes and primary macrophages. We show that HPBP is efficient in naïve and HIV-1 AZT-resistant strains. Our results revealed HPBP as a new and potent anti HIV molecule that inhibits transcription of the virus, which has not yet been targeted by HAART and therefore opens new strategies in the treatment of HIV infection.

Inhibition of herpesvirus and influenza virus replication by blocking polymerase subunit interactions.

Science.gov (United States)

Palù, Giorgio; Loregian, Arianna

2013-09-01

Protein-protein interactions (PPIs) play a key role in many biological processes, including virus replication in the host cell. Since most of the PPIs are functionally essential, a possible strategy to inhibit virus replication is based on the disruption of viral protein complexes by peptides or small molecules that interfere with subunit interactions. In particular, an attractive target for antiviral drugs is the binding between the subunits of essential viral enzymes. This review describes the development of new antiviral compounds that inhibit herpesvirus and influenza virus replication by blocking interactions between subunit proteins of their polymerase complexes. Copyright © 2013 Elsevier B.V. All rights reserved.

Influence of N-15 labelled urea and azotobacter on corn yield and nitrogen budget as affected by organic matter

Energy Technology Data Exchange (ETDEWEB)

Soliman, S M; Abdelmonem, M A [Soil and Water Dept., Atomic Energy Authority, Cairo, (Egypt)

1995-10-01

As sandy soils of Egypt are poor in their chemical and physical properties, their fertilization with chemical or biological fertilizer is essential. The reported greenhouse experiment was conducted, using sandy soil of Egypt to evaluate the impact of urea fertilizer, applied alone combined with nitrification inhibitors (DCD) or (N-serve) on (corn yield and N-losses) as compared with inoculation with azotobacter under organic matter treatment as soil amendment. Total dry matter was recorded, while N-uptake by corn, and N-recovery due to inoculation with azotobacter was determined using N-15 dilution technique. Data obtained indicated that, application of DCD or N-serve with urea increased corn dry matter weight as well N-15 recovery. Significant increase in N-recovery was obtained due to nitrification inhibitor application and azotobacter inoculation. N-15 losses were reduced due to application of DCD and N-serve from 45% and respectively. Use of bio fertilizers and nitrification inhibitors could play an important role in corn production in sandy soil, as well as decrease the losses of applied N-fertilizers. fig., 3 tabs.

Influence of N-15 labelled urea and azotobacter on corn yield and nitrogen budget as affected by organic matter

International Nuclear Information System (INIS)

Soliman, S.M.; Abdelmonem, M.A.

1995-01-01

As sandy soils of Egypt are poor in their chemical and physical properties, their fertilization with chemical or biological fertilizer is essential. The reported greenhouse experiment was conducted, using sandy soil of Egypt to evaluate the impact of urea fertilizer, applied alone combined with nitrification inhibitors (DCD) or (N-serve) on (corn yield and N-losses) as compared with inoculation with azotobacter under organic matter treatment as soil amendment. Total dry matter was recorded, while N-uptake by corn, and N-recovery due to inoculation with azotobacter was determined using N-15 dilution technique. Data obtained indicated that, application of DCD or N-serve with urea increased corn dry matter weight as well N-15 recovery. Significant increase in N-recovery was obtained due to nitrification inhibitor application and azotobacter inoculation. N-15 losses were reduced due to application of DCD and N-serve from 45% and respectively. Use of bio fertilizers and nitrification inhibitors could play an important role in corn production in sandy soil, as well as decrease the losses of applied N-fertilizers. fig., 3 tabs

Comparison of Acute Toxicity of Algal Metabolites Using Bioluminescence Inhibition Assay

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Hansa Jeswani

2015-01-01

Full Text Available Microalgae are reported to degrade hazardous compounds. However, algae, especially cyanobacteria are known to produce secondary metabolites which may be toxic to flora, fauna and human beings. The aim of this study was selection of an appropriate algal culture for biological treatment of biomass gasification wastewater based on acute toxicity considerations. The three algae that were selected were Spirulina sp., Scenedesmus abundans and a fresh water algal consortium. Acute toxicity of the metabolites produced by these algal cultures was tested at the end of log phase using the standard bioluminescence inhibition assay based on Vibrio fischeri NRRLB 11174. Scenedesmus abundans and a fresh water algal consortium dominated by cyanobacteria such as Phormidium, Chroococcus and Oscillatoria did not release much toxic metabolites at the end of log phase and caused only about 20% inhibition in bioluminescence. In comparison, Spirulina sp. released toxic metabolites and caused 50% bioluminescence inhibition at 3/5 times dilution of the culture supernatant (EC50.

Inhibition of Shiga toxin 2 (Stx2) in apple juices and its resistance to pasteurization.

Science.gov (United States)

Rasooly, Reuven; Do, Paula M; Levin, Carol E; Friedman, Mendel

2010-06-01

In the present study, we evaluated Shiga toxin (Stx2) activity in apple juices by measuring a decrease in dehydrogenase activity of Vero cells with the microculture tetrazolium (MTT) assay. Freshly prepared juice from Red Delicious apples and Golden Delicious apples inhibited the biological activity of the bacterial toxin Stx2 produced by E. coli O157:H7 strains. Studies with immunomagnetic beads bearing specific antibodies against the toxin revealed that Stx2 activity was restored when removed from the apple juice. SDS gel electrophoresis revealed no difference (P pasteurize apple juice, but lost all activity when exposed to 100 degrees C for 5 min. The results suggest that pasteurization of apple juice used to inactivate E. coli O157:H7 has no effect on Stx2, and that food-compatible and safe antitoxin compounds can be used to inhibit the biological activity of the Shiga toxin.

Biological basis of combination therapy with radiation and bleomycin

International Nuclear Information System (INIS)

Fukuda, Hiroshi; Matsuzawa, Taiju; Yokoyama, Kumiko; Okuyama, Shinichi; Yamaura, Hiroshi

1976-01-01

The biological basis for combination therapy with radiation and bleomycin (BLM) was studied on C 2 W cells growing in vitro. When BLM was added to the medium before or after irradiation, a potentiating effect was observed. The potentiation remained for 4-6 hours after irradiation. To make clear the mechanism, both type of repair from radiation damage (Elkind type and PLD) by BLM were examined. BLM didn't inhibit the Elkind type recovery but it did inhibit the repair of potentially lethal damage (PLD repair). Plateau phase C 2 W cells were irradiated, incubated at 37 0 C for a various number of hours, then trypsinized for colony formation. PLD repair was inhibited when BLM was added immediately after irradiation. Based on such experimental results, we treated lung cancer with combination of radiation and BLM. BLM was injected intravenously within 30 minutes after irradiation. Although it seems too early to discuss the result of the combination therapy, it is very promising. (J.P.N.)

Biological basis of combination therapy with radiation and bleomycin

Energy Technology Data Exchange (ETDEWEB)

Fukuda, H; Matsuzawa, T; Yokoyama, K; Okuyama, S; Yamaura, H [Tohoku Univ., Sendai (Japan). Research Inst. for Tuberculosis, Leprosy and Cancer

1976-01-01

The biological basis for combination therapy with radiation and bleomycin (BLM) was studied on C/sub 2/W cells growing in vitro. When BLM was added to the medium before or after irradiation, a potentiating effect was observed. The potentiation remained for 4-6 hours after irradiation. To make clear the mechanism, both type of repair from radiation damage (Elkind type and PLD) by BLM were examined. BLM didn't inhibit the Elkind type recovery but it did inhibit the repair of potentially lethal damage (PLD repair). Plateau phase C/sub 2/W cells were irradiated, incubated at 37/sup 0/C for a various number of hours, then trypsinized for colony formation. PLD repair was inhibited when BLM was added immediately after irradiation. Based on such experimental results, we treated lung cancer with combination of radiation and BLM. BLM was injected intravenously within 30 minutes after irradiation. Although it seems too early to discuss the result of the combination therapy, it is very promising.

Fate of NDMA precursors through an MBR-NF pilot plant for urban wastewater reclamation and the effect of changing aeration conditions.

Science.gov (United States)

Mamo, Julian; Insa, Sara; Monclús, Hèctor; Rodríguez-Roda, Ignasi; Comas, Joaquim; Barceló, Damià; Farré, Maria José

2016-10-01

The removal of N-nitrosodimethylamine (NDMA) formation potential through a membrane bioreactor (MBR) coupled to a nanofiltration (NF) pilot plant that treats urban wastewater is investigated. The results are compared to the fate of the individual NDMA precursors detected: azithromycin, citalopram, erythromycin, clarithromycin, ranitidine, venlafaxine and its metabolite o-desmethylvenlafaxine. Specifically, the effect of dissolved oxygen in the aerobic chamber of the MBR pilot plant on the removal of NDMA formation potential (FP) and individual precursors is studied. During normal aerobic operation, implying a fully nitrifying system, the MBR was able to reduce NDMA precursors above 94%, however this removal percentage was reduced to values as low as 72% when changing the conditions to minimize nitrification. Removal decreased also for azithromycin (68-59%), citalopram (31-17%), venlafaxine (35-15%) and erythromycin (61-16%) on average during nitrifying versus non-nitrifying conditions. The removal of clarithromycin, o-desmethylvenlafaxine and ranitidine could not be correlated with the nitrification inhibition, as it varied greatly during the experiment time. The MBR pilot plant is coupled to a nanofiltration (NF) system and the results on the rejection of both, NDMA FP and individual precursors, through this system was above 90%. Finally, results obtained for the MBR pilot plant are compared to the percentage of removal by a conventional full scale biological wastewater treatment plant (WWTP) fed with the same influent. During aerobic operation, the removal of NDMA FP by the MBR pilot plant was similar to the full scale WWTP. Copyright © 2016 Elsevier Ltd. All rights reserved.

Comparison of biological activated carbon (BAC) and membrane bioreactor (MBR) for pollutants removal in drinking water treatment.

Science.gov (United States)

Tian, J Y; Chen, Z L; Liang, H; Li, X; Wang, Z Z; Li, G B

2009-01-01

Biological activated carbon (BAC) and membrane bioreactor (MBR) were systematically compared for the drinking water treatment from slightly polluted raw water under the same hydraulic retention time (HRT) of 0.5 h. MBR exhibited excellent turbidity removal capacity due to the separation of the membrane; while only 60% of influent turbidity was intercepted by BAC. Perfect nitrification was achieved by MBR with the 89% reduction in ammonia; by contrast, BAC only eliminated a moderate amount of influent ammonia (by 54.5%). However, BAC was able to remove more dissolved organic matter (DOM, especially for organic molecules of 3,000 approximately 500 Daltons) and corresponding disinfection by-product formation potential (DBPFP) in raw water than MBR. Unfortunately, particulate organic matter (POM) was detected in the BAC effluent. On the other hand, BAC and MBR displayed essentially the same capacity for biodegradable organic matter (BOM) removal. Fractionation of DOM showed that the removal efficiencies of hydrophobic neutrals, hydrophobic acids, weakly hydrophobic acids and hydrophilic organic matter through BAC treatment were 11.7%, 8.8%, 13.9% and 4.8% higher than that through MBR; while MBR achieved 13.8% higher hydrophobic bases removal as compared with BAC.

Systems Biology Graphical Notation: Process Description language Level 1 Version 1.3.

Science.gov (United States)

Moodie, Stuart; Le Novère, Nicolas; Demir, Emek; Mi, Huaiyu; Villéger, Alice

2015-09-04

The Systems Biological Graphical Notation (SBGN) is an international community effort for standardized graphical representations of biological pathways and networks. The goal of SBGN is to provide unambiguous pathway and network maps for readers with different scientific backgrounds as well as to support efficient and accurate exchange of biological knowledge between different research communities, industry, and other players in systems biology. Three SBGN languages, Process Description (PD), Entity Relationship (ER) and Activity Flow (AF), allow for the representation of different aspects of biological and biochemical systems at different levels of detail. The SBGN Process Description language represents biological entities and processes between these entities within a network. SBGN PD focuses on the mechanistic description and temporal dependencies of biological interactions and transformations. The nodes (elements) are split into entity nodes describing, e.g., metabolites, proteins, genes and complexes, and process nodes describing, e.g., reactions and associations. The edges (connections) provide descriptions of relationships (or influences) between the nodes, such as consumption, production, stimulation and inhibition. Among all three languages of SBGN, PD is the closest to metabolic and regulatory pathways in biological literature and textbooks, but its well-defined semantics offer a superior precision in expressing biological knowledge.

Nitrogen management and nitrification inhibitor effects on nitrogen-15 urea: 1. Yield and fertilizer use efficiency

International Nuclear Information System (INIS)

Walters, D.T.; Malzer, G.L.

1990-01-01

Nitrification inhibitors (NI) are sometimes recommended for use with ammoniacal fertilizers in corn (Zea mays L.) production to improve fertilizer N use efficiency (FUE). The objectives of this experiment were to evaluate the effects of the NI nitrapyrin [2-chloro-6-(trichloromethyl) pyridine] application on yield and FUE of irrigated corn, and to monitor the fate of a single application of 15 N-enriched urea during a multiyear period in both soil and plant. Treatments included a factorial combination of two N rates (90 or 180 kg urea-N ha -1 yr -1 ) applied during a 3-yr period, with or without a NI and with or without incorporation, plus a zero-N control. Twenty-seven nonweighing lysimeters were used to quantify leaching load. Treatment effects on yield and FUE differed each year due to interactions of climate and N-management variables. Nonincorporated urea + NI reduced grain yield when leaching load was low and increased yield at the 90 kg ha -1 N rate when leaching load was low. The NI increased FUE only at the 90 kg ha -1 N rate when leaching load was high. Incorporation of urea + NI reduced plant recovery of fertilizer-derived N (FDN) in the year of application, but resulted in increased uptake of residual FDN in subsequent years. Incorporation of NI with moderate N rates coupled with conservative irrigation management should reduce the risk of yield loss and minimize NO 3 movement to groundwater

Nitrification activity and community structure of nitrite-oxidizing bacteria in the bioreactors operated with addition of pharmaceuticals

International Nuclear Information System (INIS)

Kraigher, Barbara; Mandic-Mulec, Ines

2011-01-01

Pharmaceuticals represent a group of the new emerging contaminants, which might influence microbial communities in the activated sludge. Nitrification activity and Nitrospira community structure in the small-scale reactors supplied with different concentrations (0, 50, 200, 500 μg L -1 ) of the selected pharmaceuticals (ibuprofen, naproxen, ketoprofen, diclofenac and clofibric acid) were evaluated. Ammonia removal was not influenced by selected pharmaceuticals. However, in the two reactors operated with 50 μg L -1 of pharmaceuticals (R50 and R50P), the effluent concentration of N-(NO 2 - + NO 3 - ) was significantly higher than in the other reactors. Nitrospira community structure was assessed by terminal restriction fragment length polymorphism (T-RFLP) and by cloning and sequencing of the partial genes for 16S rRNA. Nitrospira spp. were detected in all reactors. The two dominant T-RFs represented the sublineages I and II of the genus Nitrospira. Main shifts were observed in the reactors R50 and R50P, where the T-RF representing sublineage II was much higher as compared to the other reactors. Consistent with this, the Nitrospira sublineage II was detected only in the clone libraries from the reactors R50 and R50P. Our results suggest that the relative abundance of Nitrospira sublineage II could be related to the effluent N-(NO 2 - + NO 3 - ) concentration.

Pyruvic Oxime Nitrification and Copper and Nickel Resistance by a Cupriavidus pauculus, an Active Heterotrophic Nitrifier-Denitrifier

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Miguel Ramirez

2014-01-01

Full Text Available Heterotrophic nitrifiers synthesize nitrogenous gasses when nitrifying ammonium ion. A Cupriavidus pauculus, previously thought an Alcaligenes sp. and noted as an active heterotrophic nitrifier-denitrifier, was examined for its ability to produce nitrogen gas (N2 and nitrous oxide (N2O while heterotrophically nitrifying the organic substrate pyruvic oxime [CH3–C(NOH–COOH]. Neither N2 nor N2O were produced. Nucleotide and phylogenetic analyses indicated that the organism is a member of a genus (Cupriavidus known for its resistance to metals and its metabolism of xenobiotics. The microbe (a Cupriavidus pauculus designated as C. pauculus strain UM1 was examined for its ability to perform heterotrophic nitrification in the presence of Cu2+ and Ni2+ and to metabolize the xenobiotic phenol. The bacterium heterotrophically nitrified well when either 1 mM Cu2+ or 0.5 mM Ni2+ was present in either enriched or minimal medium. The organism also used phenol as a sole carbon source in either the presence or absence of 1 mM Cu2+ or 0.5 mM Ni2+. The ability of this isolate to perform a number of different metabolisms, its noteworthy resistance to copper and nickel, and its potential use as a bioremediation agent are discussed.

Robust biological nitrogen removal by creating multiple tides in a single bed tidal flow constructed wetland.

Science.gov (United States)

Hu, Yuansheng; Zhao, Yaqian; Rymszewicz, Anna

2014-02-01

Achieving effective total nitrogen (TN) removal is one of the major challenges faced by constructed wetlands (CWs). To address this issue, multiple "tides" were proposed in a single stage tidal flow constructed wetland (TFCW). With this adoption, exceptional TN removal (85% on average) was achieved under a high nitrogen loading rate (NLR) of around 28 g Nm(-2)day(-1), which makes the proposed system an adequate option to provide advanced wastewater treatment for peri-urban communities and rural area. It was revealed that the multiple "tides" not only promoted TN removal performance, but also brought more flexibility to TFCWs. Adsorption of NH4(+)-N onto the wetland medium (during contact period) and regeneration of the adsorption capacity via nitrification (during bed resting) were validated as the key processes for NH4(+)-N conversion in TFCWs. Moreover, simultaneous nitrification denitrification (SND) was found to be significant during the bed resting period. These findings will provide a new foundation for the design and modeling of nitrogen conversion and oxygen transfer in TFCWs. © 2013.

Improving the biological nitrogen removal process in pharmaceutical wastewater treatment plants: a case study.

Science.gov (United States)

Torrijos, M; Carrera, J; Lafuente, J

2004-04-01

The Biological Nitrogen Removal (BNR) process of some pharmaceutical wastewater treatment plants has important operational problems. This study shows that, in order to solve these problems, the design of industrial BNR processes should start by analysing three key parameters: the characteristics of the wastewater load, the determination of the maximum TKN removal rate and the detection of toxic or inhibitory compounds in the wastewater. A case study of this analysis in pharmaceutical wastewater is presented here. In this case, the conventional TKN analytical method does not make an accurate characterisation of the wastewater load because it measures a concentration of 100 mg TKN l(-1) whereas the real concentration, determined with a modified TKN analytical method, is 150-500 mg TKN l(-1). Also, the TKN removal of the treatment system is insufficient in some periods because it falls below legal requirements. This problem might be a consequence of the wrong characterisation of wastewater during the design process. The maximum TKN removal at 27 degrees C (24 mg N g VSS(-1) d(-1) or 197 mg N l(-1) d(-1)) was evaluated in a pilot-scale plant. This value is six times greater than the average NLR applied in the full-scale plant. Finally, some of the components of the wastewater, such as p-phenylenediamine, might have inhibitory or toxic effects on the biological process. P-phenylenediamine causes a large decrease in the nitrification rate. This effect was determined by respirometry. This methodology shows that the effect is mainly inhibitory with a contact time of 30 min and if the contact time is longer, 14 hours, a toxic effect is observed.

Prostaglandin E(2) synthase inhibition as a therapeutic target.

Science.gov (United States)

Iyer, Jitesh P; Srivastava, Punit K; Dev, Rishabh; Dastidar, Sunanda G; Ray, Abhijit

2009-07-01

Most NSAIDs function by inhibiting biosynthesis of PGE(2) by inhibition of COX-1 and/or COX-2. Since COX-1 has a protective function in the gastro-intestinal tract (GIT), non-selective inhibition of both cycloxy genases leads to moderate to severe gastro-intestinal intolerance. Attempts to identify selective inhibitors of COX-2, led to the identification of celecoxib and rofecoxib. However, long-term use of these drugs has serious adverse effects of sudden myocardial infarction and thrombosis. Drug-mediated imbalance in the levels of prostaglandin I(2) (PGI(2)) and thromboxane A(2) (TXA(2)) with a bias towards TXA(2) may be the primary reason for these events. This resulted in the drugs being withdrawn from the market, leaving a need for an effective and safe anti-inflammatory drug. Recently, the focus of research has shifted to enzymes downstream of COX in the prosta glandin biosynthetic pathway such as prostaglandin E(2) synthases. Microsomal prostaglandin E(2) synthase-1 (mPGES-1) specifically isomerizes PGH(2) to PGE(2), under inflammatory conditions. In this review, we examine the biology of mPGES-1 and its role in disease. Progress in designing molecules that can selectively inhibit mPGES-1 is reviewed. mPGES-1 has the potential to be a target for anti-inflammatory therapy, devoid of adverse GIT and cardiac effects and warrants further investigation.

Presence and biological activity of antibiotics used in fuel ethanol and corn co-product production.

Science.gov (United States)

Compart, D M Paulus; Carlson, A M; Crawford, G I; Fink, R C; Diez-Gonzalez, F; Dicostanzo, A; Shurson, G C

2013-05-01

Antibiotics are used in ethanol production to control bacteria from competing with yeast for nutrients during starch fermentation. However, there is no published scientific information on whether antibiotic residues are present in distillers grains (DG), co-products from ethanol production, or whether they retain their biological activity. Therefore, the objectives of this study were to quantify concentrations of various antibiotic residues in DG and determine whether residues were biologically active. Twenty distillers wet grains and 20 distillers dried grains samples were collected quarterly from 9 states and 43 ethanol plants in the United States. Samples were analyzed for DM, CP, NDF, crude fat, S, P, and pH to describe the nutritional characteristics of the samples evaluated. Samples were also analyzed for the presence of erythromycin, penicillin G, tetracycline, tylosin, and virginiamycin M1, using liquid chromatography and mass spectrometry. Additionally, virginiamycin residues were determined, using a U.S. Food and Drug Administration-approved bioassay method. Samples were extracted and further analyzed for biological activity by exposing the sample extracts to 10(4) to 10(7) CFU/mL concentrations of sentinel bacterial strains Escherichia coli ATCC 8739 and Listeria monocytogenes ATCC 19115. Extracts that inhibited bacterial growth were considered to have biological activity. Physiochemical characteristics varied among samples but were consistent with previous findings. Thirteen percent of all samples contained low (≤1.12 mg/kg) antibiotic concentrations. Only 1 sample extract inhibited growth of Escherichia coli at 10(4) CFU/mL, but this sample contained no detectable concentrations of antibiotic residues. No extracts inhibited Listeria monocytogenes growth. These data indicate that the likelihood of detectable concentrations of antibiotic residues in DG is low; and if detected, they are found in very low concentrations. The inhibition in only 1 DG

Biological conversion of coal synthesis gas to methane

Energy Technology Data Exchange (ETDEWEB)

Barik, S; Corder, R E; Clausen, E C; Gaddy, J L

1987-09-01

High temperatures and pressures are required, and therefore, high costs incurred during catalytic upgrading of coal synthesis gas to methane. Thus, the feasibility of biological reactions in converting synthesis gas to methane has been demonstrated in mixed and pure cultures. Complete conversion has been achieved in 2 hours with a mixed culture, and 45 minutes to 1.5 hours in pure cultures of P. productus and Methanothrix sp.. Typical sulfur levels involved during the process are found not to inhibit the bacteria and so sulfur does not have to be removed prior to biomethanation. Preliminary economic analyses indicate that coal gas may be biologically methanated for 50-60 cents/million Btu. Further studies with pure culture bacteria and increased pressure are expected to enhance biomethanation economics.

Nitrogen cycling in a flooded-soil ecosystem planted to rice (Oryza sativa L.)

International Nuclear Information System (INIS)

Reddy, K.R.

1982-01-01

15 N studies of various aspects of the nitrogen cycle in a flooded rice ecosystem on Crowley silt loam soil in Louisiana were reviewed to construct a mass balance model of the nitrogen cycle for this system. Nitrogen transformations modeled included 1) net ammonification (0.22 mg NH 4+ -N kg dry soil - 1 day - 1 ). 2) net nitrification (207 mg NO 3- -N kg dry soil - 1 day - 1 ). 3) denitrification (0.37 mg N kg dry soil - 1 day - 1 ), and 4) biological N 2 fixation (0.16 mg N kg dry soil - 1 day - 1 ). Nitrogen inputs included 1) application of fertilizers, 2) incorporation of crop residues, 3) biological N 2 fixation, and 4) deposition. Nitrogen outputs included 1) crop removal, 2) gaseous losses from NH 3 volatilization and simultaneous occurrence of nitrification-denitrification, and 3) leaching and runoff. Mass balance calculations indicated that 33% of the available inorganic nitrogen was recovered by rice, and the remaining nitrogen was lost from the system. Losses of N due to ammonia volatilization were minimal because fertilizer-N was incorporated into the soil. A significant portion of inorganic-N was lost by ammonium diffusion from the anaerobic layer to the aerobic layer in response to a concentration gradient and subsequent nitrification in the aerobic layer followed by nitrate diffusion into the anaerobic layer and denitrification into gaseous end products. Leaching and surface runoff losses were minimal. (orig.)

Strong cellulase inhibition by Mannan polysaccharides in cellulose conversion to sugars.

Science.gov (United States)

Kumar, Rajeev; Wyman, Charles E

2014-07-01

Cellulase enzymes contribute a major fraction of the total cost for biological conversion of lignocellulosic biomass to fuels and chemicals. Although a several fold reduction in cellulase production costs and enhancement of cellulase activity and stability have been reported in recent years, sugar yields are still lower at low enzyme doses than desired commercially. We recently reported that hemicellulose xylan and its oligomers strongly inhibit cellulase and that supplementation of cellulase with xylanase and β-xylosidase would significantly reduce such inhibition. In this study, mannan polysaccharides and their enzymatically prepared hydrolyzates were discovered to be strongly inhibitory to fungal cellulase in cellulose conversion (>50% drop in % relative conversion), even at a small concentration of 0.1 g/L, and inhibition was much greater than experienced by other known inhibitors such as cellobiose, xylooligomers, and furfural. Furthermore, cellulase inhibition dramatically increased with heteromannan loading and mannan substitution with galactose side units. In general, enzymatically prepared hydrolyzates were less inhibitory than their respective mannan polysaccharides except highly substituted ones. Supplementation of cellulase with commercial accessory enzymes such as xylanase, pectinase, and β-glucosidase was effective in greatly relieving inhibition but only for less substituted heteromannans. However, cellulase supplementation with purified heteromannan specific enzymes relieved inhibition by these more substituted heteromannans as well, suggesting that commercial preparations need to have higher amounts of such activities to realize high sugar yields at the low enzyme protein loadings needed for low cost fuels production. © 2014 Wiley Periodicals, Inc.

Dietary Polyphenols and Their Biological Significance

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Hongxiang Lou

2007-09-01

Full Text Available Dietary polyphenols represent a wide variety of compounds that occur in fruits,vegetables, wine, tea, extra virgin olive oil, chocolate and other cocoa products. They aremostly derivatives and/or isomers of flavones, isoflavones, flavonols, catechins andphenolic acids, and possess diverse biological properties such as antioxidant, antiapoptosis,anti-aging, anticarcinogen, anti-inflammation, anti-atherosclerosis, cardiovascularprotection, improvement of the endothelial function, as well as inhibition of angiogenesisand cell proliferation activity. Most of these biological actions have been attributed to theirintrinsic reducing capabilities. They may also offer indirect protection by activatingendogenous defense systems and by modulating cellular signaling processes such asnuclear factor-kappa B (NF-кB activation, activator protein-1(AP-1 DNA binding,glutathione biosynthesis, phosphoinositide 3 (PI3-kinase/protein kinase B (Akt pathway,mitogen-activated protein kinase (MAPK proteins [extracellular signal-regulated proteinkinase (ERK, c-jun N-terminal kinase (JNK and P38 ] activation, and the translocationinto the nucleus of nuclear factor erythroid 2 related factor 2 (Nrf2. This paper covers themost recent literature on the subject, and describes the biological mechanisms of action andprotective effects of dietary polyphenols.

The kinetics for ammonium and nitrite oxidation under the effect of hydroxylamine.

Science.gov (United States)

Wan, Xinyu; Xiao, Pengying; Zhang, Daijun; Lu, Peili; Yao, Zongbao; He, Qiang

2016-01-01

The kinetics for ammonium (NH4(+)) oxidation and nitrite (NO2(-)) oxidation under the effect of hydroxylamine (NH2OH) were studied by respirometry using the nitrifying sludge from a laboratory-scale sequencing batch reactor. Modified models were used to estimate kinetics parameters of ammonia and nitrite oxidation under the effect of hydroxylamine. An inhibition effect of hydroxylamine on the ammonia oxidation was observed under different hydroxylamine concentration levels. The self-inhibition coefficient of hydroxylamine oxidation and noncompetitive inhibition coefficient of hydroxylamine for nitrite oxidation was estimated by simulating exogenous oxygen-uptake rate profiles, respectively. The inhibitive effect of NH2OH on nitrite-oxidizing bacteria was stronger than on ammonia-oxidizing bacteria. This work could provide fundamental data for the kinetic investigation of the nitrification process.

Inhibition of Shiga Toxin 2 (Stx2) in Apple Juices and its Resistance to Pasteurization

Science.gov (United States)

In the present study, we evaluated Shiga toxin (Stx2) activity in apple juices by measuring a decrease in dehydrogenase activity of Vero cells with the microculture tetrazolium (MTT) assay. Freshly prepared juice from Red Delicious apples and Golden Delicious apples inhibited the biological activity...

Noncompetitive inhibition of indolethylamine-N-methyltransferase by N,N-dimethyltryptamine and N,N-dimethylaminopropyltryptamine.

Science.gov (United States)

Chu, Uyen B; Vorperian, Sevahn K; Satyshur, Kenneth; Eickstaedt, Kelsey; Cozzi, Nicholas V; Mavlyutov, Timur; Hajipour, Abdol R; Ruoho, Arnold E

2014-05-13

Indolethylamine-N-methyltransferase (INMT) is a Class 1 transmethylation enzyme known for its production of N,N-dimethyltryptamine (DMT), a hallucinogen with affinity for various serotonergic, adrenergic, histaminergic, dopaminergic, and sigma-1 receptors. DMT is produced via the action of INMT on the endogenous substrates tryptamine and S-adenosyl-l-methionine (SAM). The biological, biochemical, and selective small molecule regulation of INMT enzyme activity remain largely unknown. Kinetic mechanisms for inhibition of rabbit lung INMT (rabINMT) by the product, DMT, and by a new novel tryptamine derivative were determined. After Michaelis-Menten and Lineweaver-Burk analyses had been applied to study inhibition, DMT was found to be a mixed competitive and noncompetitive inhibitor when measured against tryptamine. The novel tryptamine derivative, N-[2-(1H-indol-3-yl)ethyl]-N',N'-dimethylpropane-1,3-diamine (propyl dimethyl amino tryptamine or PDAT), was shown to inhibit rabINMT by a pure noncompetitive mechanism when measured against tryptamine with a Ki of 84 μM. No inhibition by PDAT was observed at 2 mM when it was tested against structurally similar Class 1 methyltransferases, such as human phenylethanolamine-N-methyltransferase (hPNMT) and human nicotinamide-N-methyltransferase (hNNMT), indicating selectivity for INMT. The demonstration of noncompetitive mechanisms for INMT inhibition implies the presence of an inhibitory allosteric site. In silico analyses using the computer modeling software Autodock and the rabINMT sequence threaded onto the human INMT (hINMT) structure (Protein Data Bank entry 2A14 ) identified an N-terminal helix-loop-helix non-active site binding region of the enzyme. The energies for binding of DMT and PDAT to this region of rabINMT, as determined by Autodock, were -6.34 and -7.58 kcal/mol, respectively. Assessment of the allosteric control of INMT may illuminate new biochemical pathway(s) underlying the biology of INMT.

YK-4-279 inhibits ERG and ETV1 mediated prostate cancer cell invasion.

Directory of Open Access Journals (Sweden)

Said Rahim

2011-04-01

Full Text Available Genomic rearrangements involving the ETS family of transcription factors occur in 40-70% of prostate cancer cases. ERG and ETV1 are the most common ETS members observed in these genetic alterations. The high prevalence of these rearrangements and their biological significance represents a novel therapeutic target for the treatment of prostate cancer.We recently reported the development of YK-4-279, a small molecule inhibitor of EWS-FLI1 oncoprotein in Ewing's Sarcoma. Since ERG and ETV1 belong to the same class of ETS factors as FLI1, we tested the ability of YK-4-279 to inhibit biological functions of ERG and ETV1 proteins in prostate cancer. YK-4-279 inhibited ERG and ETV1 mediated transcriptional activity in a luciferase assay. YK-4-279 also decreased ERG and ETV1 downstream target mRNA and protein expression in ETV1-fusion positive LNCaP and ERG fusion positive VCaP cells. YK-4-279 reduced the motility of LNCaP cells in a scratch assay and the invasive phenotype of both LNCaP and VCaP cells in a HUVEC invasion assay. Fusion-negative PC3 cells were unresponsive to YK-4-279. SiRNA mediated ERG knockdown in VCaP cells resulted in a loss of drug responsiveness. Concurrently, transient ERG expression in PC-3 cells resulted in increased invasive potential, which was reduced by YK-4-279.These data demonstrate that YK-4-279 inhibits ERG and ETV1 biological activity in fusion-positive prostate cancer cells leading to decreased motility and invasion. Therefore, YK-4-279 may have an impact on metastasis in prostate cancer and it may be further evaluated for its clinical applications in prostate cancer in addition to Ewing's sarcoma.

Insulin-like growth factor (IGF) binding protein from human decidua inhibits the binding and biological action of IGF-I in cultured choriocarcinoma cells

International Nuclear Information System (INIS)

Ritvos, O.; Ranta, T.; Jalkanen, J.; Suikkari, A.M.; Voutilainen, R.; Bohn, H.; Rutanen, E.M.

1988-01-01

The placenta expresses genes for insulin-like growth factors (IGFs) and possesses IGF-receptors, suggesting that placental growth is regulated by IGFs in an autocrine manner. We have previously shown that human decidua, but not placenta, synthesizes and secretes a 34 K IGF-binding protein (34 K IGF-BP) called placental protein 12. We now used human choriocarcinoma JEG-3 cell monolayer cultures and recombinant (Thr59)IGF-I as a model to study whether the decidual 34 K IGF-BP is able to modulate the receptor binding and biological activity of IGFs in trophoblasts. JEG-3 cells, which possess type I IGF receptors, were unable to produce IGF-BPs. Purified 34 K IGF-BP specifically bound [125I]iodo-(Thr59)IGF-I. Multiplication-stimulating activity had 2.5% the potency of (Thr59)IGF-I, and insulin had no effect on the binding of [125I] iodo-(Thr59)IGF-I. 34 K IGF-BP inhibited the binding of [125I] iodo-(Thr59)IGF-I to JEG-3 monolayers in a concentration-dependent manner by forming with the tracer a soluble complex that could not bind to the cell surface as demonstrated by competitive binding and cross-linking experiments. After incubating the cell monolayers with [125I]iodo-(Thr59)IGF-I in the presence of purified binding protein, followed by cross-linking, no affinity labeled bands were seen on autoradiography. In contrast, an intensely labeled band at 40 K was detected when the incubation medium was analyzed, suggesting that (Thr59)IGF-I and 34 K IGF-BP formed a complex in a 1:1 molar ratio. Also, 34 K IGF-BP inhibited both basal and IGF-I-stimulated uptake of alpha-[3H]aminoisobutyric acid in JEG-3 cells. RNA analysis revealed that IGF-II is expressed in JEG-3 cells

Fungi & Health: can polysaccharides from the fungus inonotus obliquus (CHAGA) inhibit tumor growth?

DEFF Research Database (Denmark)

Wold, C. W.; Corthay, A.; Kjeldsen, Christian

Inonotus obliquus (Chaga) – a white rot fungus found on birch trees in the northern hemisphere –has been used in traditional medicine in Europe and Asia for centuries. Native peoples have made use of Chaga by brewing it as a tea to treat gastro-intestinal problems, to heal wounds and even to treat...... cancer. The last few decades, studies have found Chaga to contain biologically active substances such as polysaccharides, triterpenoids, polyphenols and melanin. In vivo effects such as tumor growth inhibition have been observed in mice receiving various Chaga extracts. The main hypothesis behind...... the tumor inhibiting effect is two-fold: i) fungal polysaccharides may inhibit tumor growth indirectly by activating certain immune cells such as macrophages and ii) triterpenoids and other steroids from Chaga may give a direct cytotoxic effect against cancer cells. While triterpenoids from Chaga have been...

miR-141-3p inhibits human stromal (mesenchymal) stem cell proliferation and differentiation

DEFF Research Database (Denmark)

Qiu, Weimin; Kassem, Moustapha

2014-01-01

Wnt signaling determines human stromal (mesenchymal) stem cell (hMSC) differentiation fate into the osteoblast or adipocyte lineage. microRNAs (miRNAs) are small RNA molecules of 21-25 nucleotides that regulate many aspects of osteoblast biology. Thus, we examined miRNAs regulated by Wnt signaling...... in hMSC. We identified miRNA (miR)-141-3p as a Wnt target which in turn inhibited Wnt signaling. Moreover, miR-141-3p inhibited hMSC proliferation by arresting cells at the G1 phase of the cell cycle. miR-141-3p inhibited osteoblast differentiation of hMSC as evidenced by reduced alkaline phosphatase...... activity, gene expression and in vitro mineralized matrix formation. Bioinformatic studies, Western blot analysis and 3'UTR reporter assay demonstrated that cell division cycle 25A (CDC25A) is a direct target of miR-141-3p. siRNA-mediated knock-down of CDC25A inhibited hMSC proliferation and osteoblast...

Biological responses of progestogen metabolites in normal and cancerous human breast.

Science.gov (United States)

Pasqualini, Jorge R; Chetrite, Gérard S

2010-12-01

At present, more than 200 progestogen molecules are available, but their biological response is a function of various factors: affinity to progesterone or other receptors, their structure, the target tissues considered, biological response, experimental conditions, dose, method of administration and metabolic transformations. Metabolic transformation is of huge importance because in various biological processes the metabolic product(s) not only control the activity of the maternal hormone but also have an important activity of its own. In this regard, it was observed that the 20-dihydro derivative of the progestogen dydrogesterone (Duphaston®) is significantly more active than the parent compound in inhibiting sulfatase and 17β-hydroxysteroid dehydrogenase in human breast cancer cells. Estrone sulfatase activity is also inhibited by norelgestromin, a norgestimate metabolite. Interesting information was obtained with a similar progestogen, tibolone, which is rapidly metabolized into the active 3α/3β-hydroxy and 4-ene metabolites. All these metabolites can inhibit sulfatase and 17β-hydroxysteroid dehydrogenase and stimulate sulfotransferase in human breast cancer cells. Another attractive aspect is the metabolic transformation of progesterone itself in human breast tissues. In the normal breast progesterone is mainly converted to 4-ene derivatives, whereas in the tumor tissue it is converted mostly to 5α-pregnane derivatives. 20α-Dihydroprogesterone is found mainly in normal breast tissue and possesses antiproliferative properties as well as the ability to act as an anti-aromatase agent. Consequently, this progesterone metabolite could be involved in the control of estradiol production in the normal breast and therefore implicated in one of the multifactorial mechanisms of the breast carcinogenesis process. In conclusion, a better understanding of both natural and synthetic hormone metabolic transformations and their control could potentially provide

Physicochemical and biological factors controlling water column metabolism in Sundarbans estuary, India.

Science.gov (United States)

Chaudhuri, Kaberi; Manna, Suman; Sarma, Kakoli Sen; Naskar, Pankaj; Bhattacharyya, Somenath; Bhattacharyya, Maitree

2012-10-19

Sundarbans is the single largest deltaic mangrove forest in the world, formed at estuarine phase of the Ganges - Brahmaputra river system. Primary productivity of marine and coastal phytoplankton contributes to 15% of global oceanic production. But unfortunately estuarine dynamics of tropical and subtropical estuaries have not yet received proper attention in spite of the fact that they experience considerable anthropogenic interventions and a baseline data is required for any future comparison. This study is an endeavor to this end to estimate the primary productivity (gross and net), community respiration and nitrification rates in different rivers and tidal creeks around Jharkhali island, a part of Sundarbans estuary surrounded by the mangrove forest during a period of three years starting from November'08 to October'11. Various physical and chemical parameters of water column like pH, temperature, conductivity, dissolved oxygen, turbidity, suspended particulate matter, secchi disc index, tidal fluctuation and tidal current velocity, standing crop and nutrients were measured along with water column productivity. Relationship of net water column productivity with algal biomass (standing crop), nutrient loading and turbidity were determined experimentally. Correlations of bacterial abundance with community respiration and nitrification rates were also explored. Annual integrated phytoplankton production rate of this tidal estuary was estimated to be 151.07 gC m-2 y-1. Gross primary productivity showed marked inter annual variation being lowest in monsoon and highest in postmonsoon period. Average primary production was a function of nutrient loading and light penetration in the water column. High aquatic turbidity, conductivity and suspended particulate matter were the limiting factors to attenuate light penetration with negative influence on primary production. Community respiration and nitrification rates of the estuary were influenced by the bacterial abundance

Physicochemical and biological factors controlling water column metabolism in Sundarbans estuary, India

Science.gov (United States)

2012-01-01

Background Sundarbans is the single largest deltaic mangrove forest in the world, formed at estuarine phase of the Ganges - Brahmaputra river system. Primary productivity of marine and coastal phytoplankton contributes to 15% of global oceanic production. But unfortunately estuarine dynamics of tropical and subtropical estuaries have not yet received proper attention in spite of the fact that they experience considerable anthropogenic interventions and a baseline data is required for any future comparison. This study is an endeavor to this end to estimate the primary productivity (gross and net), community respiration and nitrification rates in different rivers and tidal creeks around Jharkhali island, a part of Sundarbans estuary surrounded by the mangrove forest during a period of three years starting from November’08 to October’11. Results Various physical and chemical parameters of water column like pH, temperature, conductivity, dissolved oxygen, turbidity, suspended particulate matter, secchi disc index, tidal fluctuation and tidal current velocity, standing crop and nutrients were measured along with water column productivity. Relationship of net water column productivity with algal biomass (standing crop), nutrient loading and turbidity were determined experimentally. Correlations of bacterial abundance with community respiration and nitrification rates were also explored. Annual integrated phytoplankton production rate of this tidal estuary was estimated to be 151.07 gC m-2 y-1. Gross primary productivity showed marked inter annual variation being lowest in monsoon and highest in postmonsoon period. Conclusion Average primary production was a function of nutrient loading and light penetration in the water column. High aquatic turbidity, conductivity and suspended particulate matter were the limiting factors to attenuate light penetration with negative influence on primary production. Community respiration and nitrification rates of the estuary were

Biological responses to low dose rate gamma radiation

International Nuclear Information System (INIS)

Magae, Junji; Ogata, Hiromitsu

2003-01-01

Linear non-threshold (LNT) theory is a basic theory for radioprotection. While LNT dose not consider irradiation time or dose-rate, biological responses to radiation are complex processes dependent on irradiation time as well as total dose. Moreover, experimental and epidemiological studies that can evaluate LNT at low dose/low dose-rate are not sufficiently accumulated. Here we analyzed quantitative relationship among dose, dose-rate and irradiation time using chromosomal breakage and proliferation inhibition of human cells as indicators of biological responses. We also acquired quantitative data at low doses that can evaluate adaptability of LNT with statistically sufficient accuracy. Our results demonstrate that biological responses at low dose-rate are remarkably affected by exposure time, and they are dependent on dose-rate rather than total dose in long-term irradiation. We also found that change of biological responses at low dose was not linearly correlated to dose. These results suggest that it is necessary for us to create a new model which sufficiently includes dose-rate effect and correctly fits of actual experimental and epidemiological results to evaluate risk of radiation at low dose/low dose-rate. (author)

Capacities and limits of three different technologies for biological treatment of leachate from solid waste landfill sites

Energy Technology Data Exchange (ETDEWEB)

Martienssen, M. [Martin-Luther-Univ. Halle-Wittenberg, Halle/Saale (Germany). Bereich Umweltschutztechnik; Schulze, R. [Martin-Luther-Univ. Halle-Wittenberg, Halle/Saale (Germany). Bereich Umweltschutztechnik; Simon, J. [Martin-Luther-Univ. Halle-Wittenberg, Halle/Saale (Germany). Bereich Umweltschutztechnik

1995-12-31

Leachate from a municipal waste landfill site was treated using an activated sludge bioreactor, a fluidized bed biofilm reactor and a packed-bed column reactor (trickling filter). The leachate contained high organic matter (2.0-2.6 g/l of COD), high ammonium (300-700 mg/l) and sulphide (200-800 mg/l) concentrations, as well as low metal concentrations. The continuously operating reactors were employed to study the effects of TOC loading on the removal of TOC as well as on the nitrification and denitrification processes. Among the three biological treatment technologies investigated, the fluidized bed biofilm reactor was best with respect to removing ammonia and TOC. More than 90% of TOC and 99% of ammonia were removed when TOC loading was less than 0.5 kg/m{sup 3} x d. At a TOC loading of 4 kg/m{sup 3} x d, the removal of TOC and ammonia was 80% and 99%, respectively. In contrast, the treatment of leachate with the packed-bed reactor was successful in TOC removing only at TOC loadings less than 0.3 kg/m{sup 3} x d (TOC elimination decreased from 86% at 0.06 kg/m{sup 3} x d to 60% at 0.3 kg/m{sup 3} x d). However, the reactor was active in nitrification even at a higher TOC loading (more than a 98% ammonia elimination at a TOC loading of 0.5 kg/m{sup 3} x d). Leachate was processed in the activated sludge reactor when TOC loading was less than 0.5 kg/m{sup 3} x d (with a removal of TOC and ammonia up to 83% and 99%, respectively). The activated sludge reactor was also effective in TOC removal at a higher TOC loading (e.g. a 74% TOC removal at a TOC loading of 1 kg/m{sup 3} x d), but for ammonia elimination, the activity continuously decreased (less than 60% ammonia removal at a TOC loading of 1 kg/m{sup 3} x d). Overloading in the activated sludge system was indicated by a high concentration of ammonia and nitrite in the effluent. In the packed bed reactor, overloading was characterized by a progressively incomplete TOC removal. (orig./EF)

miR-34a expands myeloid-derived suppressor cells via apoptosis inhibition

Energy Technology Data Exchange (ETDEWEB)

Huang, Anfei, E-mail: huang_anfei@163.com [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China); Zhang, Haitao, E-mail: zhanghtjp@126.com [Department of General Surgery, The First Affiliated Hospital of Soochow University, Suzhou 215021, Jiangsu Province (China); Chen, Si, E-mail: chensisdyxb@126.com [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China); Xia, Fei, E-mail: xiafei87@gmail.com [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China); Yang, Yi, E-mail: 602744364@qq.com [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China); Dong, Fulu, E-mail: adiok0903@126.com [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China); Sun, Di, E-mail: dongfl@suda.edu.cn [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China); Xiong, Sidong, E-mail: sdxiong@suda.edu.cn [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China); Zhang, Jinping, E-mail: j_pzhang@suda.edu.cn [Institutes of Biology and Medical Sciences, Soochow University, Suzhou 215123, Jiangsu Province (China)

2014-08-15

Myeloid-derived suppressor cells (MDSCs) are a heterogeneous population and show significant expansion under pathological conditions. microRNA plays important roles in many biological processes, whether microRNAs have a function in the expansion of MDSCs is still not very clear. In this study, miR-34a overexpression can induce the expansion of MDSCs in bone marrow chimera and transgenic mice model. The experimental results suggest that miR-34a inhibited the apoptosis of MDSCs but did not affect the proliferation of MDSCs. The distinct mRNA microarray profiles of MDSCs of wild type and miR-34a over-expressing MDSCs combined with the target prediction of miR-34a suggest that miR-34a may target genes such as p2rx7, Tia1, and plekhf1 to inhibit the apoptosis of MDSCs. Taken together, miR-34a contributes to the expansion of MDSCs by inhibiting the apoptosis of MDSCs. - Highlights: • Over-expression of miR-34a increases the number of MDSCs. • miR-34a inhibits the apoptosis of MDSCs, but does not affects their proliferation. • miR-34a may inhibit the apoptosis of MDSCs via targeting the p2rx7, Tia1 and plekhf1.

Inhibiting actin depolymerization enhances osteoblast differentiation and bone formation in human stromal stem cells

DEFF Research Database (Denmark)

Chen, Li; Shi, Kaikai; Frary, Charles

2015-01-01

Remodeling of the actin cytoskeleton through actin dynamics is involved in a number of biological processes, but its role in human stromal (skeletal) stem cells (hMSCs) differentiation is poorly understood. In the present study, we demonstrated that stabilizing actin filaments by inhibiting gene...... expression of the two main actin depolymerizing factors (ADFs): Cofilin 1 (CFL1) and Destrin (DSTN) in hMSCs, enhanced cell viability and differentiation into osteoblastic cells (OB) in vitro, as well as heterotopic bone formation in vivo. Similarly, treating hMSC with Phalloidin, which is known to stabilize...... polymerized actin filaments, increased hMSCs viability and OB differentiation. Conversely, Cytocholasin D, an inhibitor of actin polymerization, reduced cell viability and inhibited OB differentiation of hMSC. At a molecular level, preventing Cofilin phosphorylation through inhibition of LIM domain kinase 1...

Fermentation of lignocellulosic hydrolysates: Inhibition and detoxification

Energy Technology Data Exchange (ETDEWEB)

Palmqvist, E.

1998-02-01

The ethanol yield and productivity obtained during fermentation of lignocellulosic hydrolysates is decreased due to the presence of inhibiting compounds, such as weak acids, furans and phenolic compounds produced during hydrolysis. Evaluation of the effect of various biological, physical and chemical detoxification treatments by fermentation assays using Saccharomyces cerevisiae was used to characterise inhibitors. Inhibition of fermentation was decreased after removal of the non-volatile compounds, pre-fermentation by the filamentous fungus Trichoderma reesei, treatment with the lignolytic enzyme laccase, extraction with ether, and treatment with alkali. Yeast growth in lignocellulosic hydrolysates was inhibited below a certain fermentation pH, most likely due to high concentrations of undissociated weak acids. The effect of individual compounds were studied in model fermentations. Furfural is reduced to furfuryl alcohol by yeast dehydrogenases, thereby affecting the intracellular redox balance. As a result, acetaldehyde accumulated during furfural reduction, which most likely contributed to inhibition of growth. Acetic acid (10 g 1{sup -1}) and furfural (3 g 1{sup -1}) interacted antagonistically causing decreased specific growth rate, whereas no significant individual or interaction effects were detected by the lignin-derived compound 4-hydroxybenzoic acid (2 g 1{sup -1}). By maintaining a high cell mass density in the fermentor, the process was less sensitive to inhibitors affecting growth and to fluctuations in fermentation pH, and in addition the depletion rate of bioconvertible inhibitors was increased. A theoretical ethanol yield and high productivity was obtained in continuous fermentation of spruce hydrolysate when the cell mass concentration was maintained at a high level by applying cell recirculation 164 refs, 16 figs, 5 tabs

Synthesis and Biological Evaluation of Glycosidase Inhibitors: gem-Difluoromethylenated Nojirimycin Analogues

DEFF Research Database (Denmark)

Bols, Mikael; Wang, Ruo-Wen; Qiu, Xiao-Long

2006-01-01

In our ongoing program aimed at the design, synthesis, and biological evaluation of novel gem-difluoromethylenated glycosidase inhibitors, gem-4,4-difluoromethylenated iminosugars (5-9) were synthesized. The biological evaluation of these synthetic iminosugars showed that the gem....... It is proposed that the unprotonated iminosugar is the species preferably bound by beta-glucosidase, due to the lower pK(a) value of iminosugar 6 than of 1 or 36, leaving iminosugars 1 and 36 mostly protonated at pH 5.0, while iminosugar 6 is not. Iminosugar 6 also displayed good and selective inhibition of beta...

Effects of specific inhibitors on anammox and denitrification in marine sediments.

Science.gov (United States)

Jensen, Marlene Mark; Thamdrup, Bo; Dalsgaard, Tage

2007-05-01

The effects of three metabolic inhibitors (acetylene, methanol, and allylthiourea [ATU]) on the pathways of N2 production were investigated by using short anoxic incubations of marine sediment with a 15N isotope technique. Acetylene inhibited ammonium oxidation through the anammox pathway as the oxidation rate decreased exponentially with increasing acetylene concentration; the rate decay constant was 0.10+/-0.02 microM-1, and there was 95% inhibition at approximately 30 microM. Nitrous oxide reduction, the final step of denitrification, was not sensitive to acetylene concentrations below 10 microM. However, nitrous oxide reduction was inhibited by higher concentrations, and the sensitivity was approximately one-half the sensitivity of anammox (decay constant, 0.049+/-0.004 microM-1; 95% inhibition at approximately 70 microM). Methanol specifically inhibited anammox with a decay constant of 0.79+/-0.12 mM-1, and thus 3 to 4 mM methanol was required for nearly complete inhibition. This level of methanol stimulated denitrification by approximately 50%. ATU did not have marked effects on the rates of anammox and denitrification. The profile of inhibitor effects on anammox agreed with the results of studies of the process in wastewater bioreactors, which confirmed the similarity between the anammox bacteria in bioreactors and natural environments. Acetylene and methanol can be used to separate anammox and denitrification, but the effects of these compounds on nitrification limits their use in studies of these processes in systems where nitrification is an important source of nitrate. The observed differential effects of acetylene and methanol on anammox and denitrification support our current understanding of the two main pathways of N2 production in marine sediments and the use of 15N isotope methods for their quantification.

Biological activities of essential oils of Endlicheria citriodora, a methyl geranate-rich lauraceae

International Nuclear Information System (INIS)

Yamaguchi, Klenicy K.L.; Veiga-Junior, Valdir F.; Pedrosa, Tatiana do Nascimento; Vasconcellos, Marne Carvalho de; Lima, Emerson Silva

2013-01-01

The essential oils of branches and leaves of Endlicheria citiodora were obtained by hydrodistillation and analysed using GC-FID, GC-MS and both NMR 13 C and 1 H, resulting in the identification of methyl geranate as major constituent (93%) in both oils. Cytotoxicity, tyrosinase-inhibition and antioxidant activities were studied and characterized. High antioxidant potential (15.52 and 13.53 μg/mL), low cytotoxicity and tyrosinase inhibition (53.85%) were observed. This is the first paper reporting the biological activities and composition of the essential oils of this species. (author)

Biological activities of essential oils of Endlicheria citriodora, a methyl geranate-rich lauraceae

Energy Technology Data Exchange (ETDEWEB)

Yamaguchi, Klenicy K.L.; Veiga-Junior, Valdir F., E-mail: valdirveiga@ufam.edu.br [Departamento de Quimica, Instituto de Ciencias Exatas, Universidade Federal do Amazonas, Manaus - AM (Brazil); Pedrosa, Tatiana do Nascimento; Vasconcellos, Marne Carvalho de; Lima, Emerson Silva [Faculdade de Ciencias Farmaceuticas, Universidade Federal do Amazonas, Manaus, AM (Brazil)

2013-09-01

The essential oils of branches and leaves of Endlicheria citiodora were obtained by hydrodistillation and analysed using GC-FID, GC-MS and both NMR {sup 13}C and {sup 1}H, resulting in the identification of methyl geranate as major constituent (93%) in both oils. Cytotoxicity, tyrosinase-inhibition and antioxidant activities were studied and characterized. High antioxidant potential (15.52 and 13.53 {mu}g/mL), low cytotoxicity and tyrosinase inhibition (53.85%) were observed. This is the first paper reporting the biological activities and composition of the essential oils of this species. (author)

Cytotoxic Effect on Cancerous Cell Lines by Biologically Synthesized Silver Nanoparticles

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Balaji Kulandaivelu

Full Text Available The biosynthesis of nanoparticles has been proposed as an environmental friendly and cost effective alternative to chemical and physical methods. Silver nanoparticles are biologically synthesized and characterized were used in the study. The invitro cytotoxic effect of biologically synthesized silver nanoparticles against MCF-7 cancer cell lines were assessed. The cytotoxic effects of the silver nanoparticles could significantly inhibited MCF-7 cancer cell lines proliferation in a time and concentration-dependent manner by MTT assay. Acridine orange, ethidium bromide (AO/EB dual staining, caspase-3 and DNA fragmentation assays were carried out using various concentrations of silver nanoparticles ranging from 1 to 100 μg/mL. At 100 μg/mL concentration, the silver nanoparticles exhibited significant cytotoxic effects and the apoptotic features were confirmed through caspase-3 activation and DNA fragmentation assays. Western blot analysis has revealed that nanoparticle was able to induce cytochrome c release from the mitochondria, which was initiated by the inhibition of Bcl-2 and activation of Bax. Thus, the results of the present study indicate that biologically synthesized silver nanoparticles might be used to treat breast cancer. The present studies suggest that these nanoparticles could be a new potential adjuvant chemotherapeutic and chemo preventive agent against cytotoxic cells. However, it necessitates clinical studies to ascertain their potential as anticancer agents.

A soluble, high-affinity, interleukin-4-binding protein is present in the biological fluids of mice

International Nuclear Information System (INIS)

Fernandez-Botran, R.; Vitetta, E.S.

1990-01-01

Cytokines such as interleukin 4 (IL-4) play a key role in the regulation of immune responses, but little is known about how their multiple activities are regulated in vivo. In this report, we demonstrate that an IL-4-binding protein (IL-4BP) is constitutively present in the biological fluids of mice (serum, ascites fluid, and urine). Binding of 125 I-labeled IL-4 to the IL-4BP is specific and saturable and can be inhibited by an excess of unlabeled IL-4 but not IL-2. The IL-4BP binds IL-4 with an affinity similar to that reported for the cellular IL-4 with an affinity similar to that reported for the cellular IL-4 receptor (K d ∼7 x 10 -11 M) and has a molecular mass of 30-40 kDa and pI values of 3.6-4.8. IL-4BP-containing biological fluids or purified IL-4BP competitively inhibit the binding of 125 I-labeled IL-4 to mouse T or B cells and inhibit the biological activity of IL-4 but not IL-2. The serum levels of IL-4BP in severe combined immunodeficiency (SCID) mice are lower than those of normal mice. The above findings suggest that IL-4BP plays an important immunoregulatory role in vivo

TGF-beta3 is expressed in taste buds and inhibits proliferation of primary cultured taste epithelial cells.

Science.gov (United States)

Nakamura, Shin-ichi; Kawai, Takayuki; Kamakura, Takashi; Ookura, Tetsuya

2010-01-01

Transforming growth factor-betas (TGF-betas), expressed in various tissues, play important roles in embryonic development and adult tissue homeostasis through their effects on cell proliferation, cell differentiation, cell death, and cell motility. However, expression of TGF-beta signaling components and their biological effect on taste epithelia has not been elucidated. We performed expression analysis of TGF-beta signaling components in taste epithelia and found that the TGF-beta3 mRNA was specifically expressed in taste buds. Type II TGF-betas receptor (TbetaR-II) mRNA was specifically expressed in the tongue epithelia including the taste epithelia. To elucidate the biological function of TGF-beta3 in taste epithelia, we performed proliferation assay with primary cultured taste epithelial cells. In the presence of TGF-beta3, percentage of BrdU-labeled cells decreased significantly, suggesting that the TGF-beta3 inhibited the proliferation of cultured taste epithelial cells through inhibiting cell-cycle entry into S phase. By quantitative reverse transcription-polymerase chain reaction assay, we found that the TGF-beta3 resulted in an increased level of expression of p15Ink4b and p21Cip1, suggesting that the TGF-beta3 inhibited the taste epithelial cell proliferation through inhibiting G1cyclin-Cdk complexes. Taken together, these results suggested that the TGF-beta3 may regulate taste epithelial cell homeostasis through controlling cell proliferation.