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Sample records for andean-patagonian canopied stream

  1. Taxonomic review of the species of Helina R.-D. (Diptera: Muscidae) from Andean-Patagonian forests.

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    Patitucci, Luciano Damián; Mulieri, Pablo Ricardo; Mariluis, Juan Carlos

    2016-08-12

    Helina Robineau-Desvoidy, 1830 is the second genus of Muscidae in terms of richness. This genus includes several species collected at high altitudes and high latitudes, and is poorly studied in the Neotropical region. Only 12 species of Helina have been recorded in the southern limit of South America in the Andean-Patagonian forests. In the present work, we studied all the species known from the Andean-Patagonian forests, with the exception of H. viola Malloch, 1934, present three new species, H. araucana sp. nov., H. dorada sp. nov., and H. ouina sp. nov., and provide the first description of the females of H. australis Carvalho & Pont, 1993 and H. rufoapicata Malloch, 1934. We also propose four new synonymies: H. nigrimana basilaris (Carvalho & Pont, 1993) and H. nigrimana grisea (Malloch, 1934) as new junior synonyms of H. nigrimana (Macquart, 1851); and H. fulvocalyptrata Malloch, 1934 and H. simplex Malloch, 1934 as new junior synonyms of H. chilensis Malloch, 1934. Finally, we provide a generic diagnosis and a new key for the Helina species of the Andean-Patagonian forests, as well as notes on the biology and distribution maps of each specimen, and discuss a preliminary contruction of groups of species.

  2. Miocene block uplift and basin formation in the Patagonian foreland: The Gastre Basin, Argentina

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    Bilmes, A.; D'Elia, L.; Franzese, J. R.; Veiga, G. D.; Hernández, M.

    2013-08-01

    The intraplate fault-block mountains and intermontane deposits of the Gastre Basin, which are recorded more than 550 km east of the Andean trench in central Patagonia, Argentina, are analyzed. The Gastre Basin is one of the largest Patagonian intermontane basins, limited by uplifted blocks strongly oblique to the Andean chain. It was originated by reverse faulting and inversion of pre-existing normal faults associated with a Mesozoic rift basin and defined by older crustal heterogeneities. The deformational event occurred during the middle Miocene, related to a short contractional episode (16.1-14.86 Ma), probably in response to an eastward migration of the Andean fold and thrust belt. During Pliocene to Quaternary times, neither younger fault-block uplifts nor reconfigurations of the basin occurred. Similarities between the study area and other parts of the Patagonian foreland - such as the presence of Miocene reverse or inversion tectonics, as well as the accommodation of the Miocene sedimentary successions - suggest that the Gastre Basin is part of a major late early to middle Miocene broken foreland system (i.e. the Patagonian broken foreland) that exhumed discrete fault-block mountains and generated contemporary basins along more than 950 km parallel to the Andean trench (i.e. between 40°00' and 48°00' south latitude). Based on recent studies on the southern Andean Margin, this continental-scale contractional episode may be the result of a flat-slab subduction segment. Nevertheless, such a hypothesis is very difficult to support when analyzing such a large flat subduction segment along the entire Patagonian trench. This suggests the need to consider alternative flat-slab trigger mechanisms or other factors in the generation of broken foreland systems.

  3. Application of two-stream model to solar radiation of rice canopy

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    Kawakata, T.

    2005-01-01

    The amount of solar radiation absorbed by a crop canopy is correlated with crop production, and thus it is necessary to estimate both transmission and reflection around the canopy for crop growth models. The 'forward and backward streams' representation of radiation has been refined to account for both transmission and reflection in the crop canopy. However, this model has not been applied to a rice canopy through the growing period. The purpose of this study is to examine whether the two-stream model is applicable to the rice canopy, and to investigate the parameters of the model. The values for both transmittance below the rice canopy and reflectance above it that were derived from the two-stream model represent the observed values throughout the growing period. The inclination factor of leaves (F), which is used in the two-stream model, was almost equivalent to the extinction coefficient of transmittance in the case of the rice canopy

  4. Deforestation and benthic indicators: how much vegetation cover is needed to sustain healthy Andean streams?

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    Iñiguez-Armijos, Carlos; Leiva, Adrián; Frede, Hans-Georg; Hampel, Henrietta; Breuer, Lutz

    2014-01-01

    Deforestation in the tropical Andes is affecting ecological conditions of streams, and determination of how much forest should be retained is a pressing task for conservation, restoration and management strategies. We calculated and analyzed eight benthic metrics (structural, compositional and water quality indices) and a physical-chemical composite index with gradients of vegetation cover to assess the effects of deforestation on macroinvertebrate communities and water quality of 23 streams in southern Ecuadorian Andes. Using a geographical information system (GIS), we quantified vegetation cover at three spatial scales: the entire catchment, the riparian buffer of 30 m width extending the entire stream length, and the local scale defined for a stream reach of 100 m in length and similar buffer width. Macroinvertebrate and water quality metrics had the strongest relationships with vegetation cover at catchment and riparian scales, while vegetation cover did not show any association with the macroinvertebrate metrics at local scale. At catchment scale, the water quality metrics indicate that ecological condition of Andean streams is good when vegetation cover is over 70%. Further, macroinvertebrate community assemblages were more diverse and related in catchments largely covered by native vegetation (>70%). Our results suggest that retaining an important quantity of native vegetation cover within the catchments and a linkage between headwater and riparian forests help to maintain and improve stream biodiversity and water quality in Andean streams affected by deforestation. This research proposes that a strong regulation focused to the management of riparian buffers can be successful when decision making is addressed to conservation/restoration of Andean catchments.

  5. [Key to chironomid pupal exuviae (Diptera: Chironomidae) of tropical high Andean streams].

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    Pratt, Narcís; González-Trujillo, Juan David; Ospina-Torres, Rodulfo

    2014-12-01

    The Chironomidae is a cosmopolitan family of Nematoceran flies with more than 20,000 species described. However the diversity of genera and species of the family in the Andean region beyond the 2,000 m.a.s.l are scarcely known. We conducted faunal surveys and biomonitoring research in different streams of Colombia, Ecuador and Peru from May 2005 to October 2011. Based on specimens collections, a taxonomic key was developed to identify pupae and pupal exuviae of 46 genera of midges (Diptera, Chironomidae) collected from streams at high altitude areas on the Andean tropical mountains. We included illustrations and brief taxonomic descriptions for all genera, of which several ones have not yet been formally described; in this latter case we used the nomenclature of Roback & Coffman (1983). For two genera, Cricotopus and Genus 1, keys to the most com- mon morphospecies were provided. Results showed that in this area the chironomid assemblages are dominated by the members of the subfamily Orthocladiinae (22 genera) followed by the Chironominae (13). Six genera of Tanypodinae were identified, while only three and two genera were present from subfamilies Podonominae and Diamesinae. This key may be very useful for both studies about drift in streams, and for biomonitoring purposes.

  6. Residential energy use in one-family households with natural gas provision in a city of the Patagonian Andean region

    International Nuclear Information System (INIS)

    Gonzalez, A.D.; Carlsson-Kanyama, A.; Crivelli, E.S.; Gortari, S.

    2007-01-01

    Residential energy use was studied in one-family houses in the city of Bariloche, in the Patagonian Andean region of Argentina. A survey was conducted of households connected to the natural gas network to correlate use of gas, living area and number of inhabitants per house. The annual average consumption of gas was found to be 169 GJ, and consumption of electricity 8 GJ. This total energy use per household per year is almost double the average value reported for Stockholm, Sweden, although both locations have similar heating requirements. The difference was mainly due to heating energy consumption per unit living space, which in Bariloche was 1530 MJ/m 2 per year, while in Stockholm the average is around 570 MJ/m 2 per year. The high energy consumption in Bariloche is explained primarily by the construction characteristics of the buildings, and secondarily by the efficiency of the heating devices used. We were able to conclude that subsidies on natural gas tariffs given to the residential sector do not promote a rational use of the resource. Furthermore, almost 40% of the population (mostly households in poverty) are not connected to the subsidised gas resource, but pay prices for alternative fuels that are between 10- and 15 times higher. Policies to improve buildings and appliances would reduce emissions and make access to energy more equitable

  7. Compliance of secondary production and eco-exergy as indicators of benthic macroinvertebrates assemblages' response to canopy cover conditions in Neotropical headwater streams.

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    Linares, Marden Seabra; Callisto, Marcos; Marques, João Carlos

    2018-02-01

    Riparian vegetation cover influences benthic assemblages structure and functioning in headwater streams, as it regulates light availability and autochthonous primary production in these ecosystems.Secondary production, diversity, and exergy-based indicators were applied in capturing how riparian cover influences the structure and functioning of benthic macroinvertebrate assemblages in tropical headwater streams. Four hypotheses were tested: (1) open canopy will determine the occurrence of higher diversity in benthic macroinvertebrate assemblages; (2) streams with open canopy will exhibit more complex benthic macroinvertebrate communities (in terms of information embedded in the organisms' biomass); (3) in streams with open canopy benthic macroinvertebrate assemblages will be more efficient in using the available resources to build structure, which will be reflected by higher eco-exergy values; (4) benthic assemblages in streams with open canopy will exhibit more secondary productivity. We selected eight non-impacted headwater streams, four shaded and four with open canopy, all located in the Neotropical savannah (Cerrado) of southeastern Brazil. Open canopy streams consistently exhibited significantly higher eco-exergy and instant secondary production values, exemplifying that these streams may support more complex and productive benthic macroinvertebrate assemblages. Nevertheless, diversity indices and specific eco-exergy were not significantly different in shaded and open canopy streams. Since all the studied streams were selected for being considered as non-impacted, this suggests that the potential represented by more available food resources was not used to build a more complex dissipative structure. These results illustrate the role and importance of the canopy cover characteristics on the structure and functioning of benthic macroinvertebrate assemblages in tropical headwater streams, while autochthonous production appears to play a crucial role as food

  8. Implementation of a subcanopy solar radiation model on a forested headwater basin in the Southern Appalachians to estimate riparian canopy density and stream insolation for stream temperature models

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    Belica, L.; Petras, V.; Iiames, J. S., Jr.; Caldwell, P.; Mitasova, H.; Nelson, S. A. C.

    2016-12-01

    Water temperature is a key aspect of water quality and understanding how the thermal regimes of forested headwater streams may change in response to climatic and land cover changes is increasingly important to scientists and resource managers. In recent years, the forested mountain watersheds of the Southeastern U.S. have experienced changing climatic patterns as well as the loss of a keystone riparian tree species and anticipated hydrologic responses include lower summer stream flows and decreased stream shading. Solar radiation is the main source of thermal energy to streams and a key parameter in heat-budget models of stream temperature; a decrease in flow volume combined with a reduction in stream shading during summer have the potential to increase stream temperatures. The high spatial variability of forest canopies and the high spatio-temporal variability in sky conditions make estimating the solar radiation reaching small forested headwater streams difficult. The Subcanopy Solar Radiation Model (SSR) (Bode et al. 2014) is a GIS model that generates high resolution, spatially explicit estimates of solar radiation by incorporating topographic and vegetative shading with a light penetration index derived from leaf-on airborne LIDAR data. To evaluate the potential of the SSR model to provide estimates of stream insolation to parameterize heat-budget models, it was applied to the Coweeta Basin in the Southern Appalachians using airborne LIDAR (NCALM 2009, 1m resolution). The LIDAR derived canopy characteristics were compared to current hyperspectral images of the canopy for changes and the SSR estimates of solar radiation were compared with pyranometer measurements of solar radiation at several subcanopy sites during the summer of 2016. Preliminary results indicate the SSR model was effective in identifying variations in canopy density and light penetration, especially in areas associated with road and stream corridors and tree mortality. Current LIDAR data and

  9. Influence of riparian canopy on macroinvertebrate composition and food habits of juvenile salmonids in several Oregon streams.

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    William R. Meehan

    1996-01-01

    The community composition of macroinvertebrates and the feeding habits of juvenile salmonids were studied in eight Oregon streams. Benthic, drift, sticky trap, and water trap samples were taken over a 3-year period, along with stomach samples of the fish. Samples were taken in stream reaches with and without riparian canopy. Both main effects—fish diet versus...

  10. Pluton emplacement and magmatic arc construction: A model from the Patagonian batholith

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    Bruce, Robert; Nelson, Eric; Weaver, Stephen

    1988-01-01

    A model of batholithic construction in Andean arcs and its applicability to possibly similar environments in the past is described. Age and compositional data from the Patagonian batholith of southern Chile show a long history of magmatism in any given area (total age range is 15 to 157 Ma), but different regions appear to have different magmatic starting ages. Furthermore, mafic rocks seem to be the oldest components of any given region. An assembly line model involving semicontinuous magmatism and uplift was outlined, which has implications for other terranes: uplift rates will be proportional to observed ranges in age, and total uplift will be proportional to the age of the oldest pluton in any given area. It is suggested that misleading results would be obtained if only small areas of similar terranes in the Archean were available for study.

  11. Transport of RFID tracers in a glacierized Andean stream (Estero Morales, Chile)

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    Rainato, Riccardo; Toro, Matteo; Mao, Luca; Fraccarollo, Luigi; Brardinoni, Francesco; Aristide Lenzi, Mario

    2015-04-01

    A proper quantification of bedload transport is crucial in order to improve the knowledge on the morphology and dynamics of river systems. Unfortunately, bedload surveys in mountain streams are notoriously difficult. Also, equations for predicting the transport capacity often overestimate the actual bedload rates, and field measurement are still rare. An alternative to direct bedload sampling during floods is the use of tracers, which allow to obtain precious data on sediment dynamic and transport due to different conditions of hydraulic forcing, especially in mountain streams. In this work, the results obtained by the employment of passive RFID tracers in a steep Andean channel are presented. The study site is the Estero Morales, a high-gradient stream located in the Metropolitan Region (central Chile). The channel bed exhibits boulder-cascade, step-pool and plane bed morphologies while the average slope is of about 9.5%. The basin (27 km2) hosts the San Francisco glacier (1.8 km2) that strongly affects the hydrological regime. In particular during the melt period (December-March) the glacier ensures daily discharge fluctuations with highly variable associated bedload transport rates. Overall, 429 RFID tracers were installed in the Estero Morales and the displacements over a reach of approximately 700 m were monitored through 15 surveys, performed between January and March 2014. The recovery rate ranges between 19% and 97%. Tracers travel distance were paired to the peaks of stream power per unit area (ω, in W/m2) that occurred during the study period. Due to the wide range of flow magnitude observed, the values of stream power were grouped in three classes: low (650-750 W/m2), moderate (750-800 W/m2), and high (800-900 W/m2). Despite the different conditions of hydraulic forcing, moderate and low classes show mean displacement very similar, equal to 33 m and 24 m, respectively. In either cases a size selective transport was observed. On the other hand, the high

  12. A two stream radiative transfer model for scaling solar induced fluorescence from leaf to canopy

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    Quaife, T. L.

    2017-12-01

    Solar induced fluorescence (SIF) is becoming widely used as a proxy for gross primary productivity (GPP), in particular with the advent of its measurement by Earth Observation satellites such as OCO and GOSAT. A major attraction of SIF is that it is independent of the assumptions embedded in light use efficiency based GPP products derived from satellite missions such as MODIS. The assumptions in such products are likely not compatible with any given land surface model and hence comparing the two is problematic. On the other hand to compare land surface model predictions of GPP to satellite based SIF data requires either (a) translation of SIF into estimates of GPP, or (b) direct predictions of SIF from the land surface model itself. The former typically relies on empirical relationships, whereas the latter can make direct use of our physiological understanding of the link between photosynthesis and fluorescence at the leaf scale and is therefore preferable. Here I derive a two stream model for fluorescence that is capable of translating between leaf scale models of SIF and the canopy leaving radiance taking into account all levels of photon scattering. Other such models have been developed previously but the model described here is physically consistent with the Sellers' two stream radiative transfer scheme which is widely used in modern land surface models. Consequently any model that already employs the Sellers's scheme can use the new model without requiring modification. This includes, for example, JULES, the land surface model of the new UK Earth System Model (UKESM) and CLM, the US Community Land Model (part of the NCAR Earth System Model). The new canopy SIF model is extremely computationally efficient and can be applied to vertically inhomogeneous canopies.

  13. Inorganic mercury (Hg2+ uptake by different plankton fractions of Andean Patagonian lakes (Argentina

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    Diéguez M.C.

    2014-07-01

    Full Text Available The species composition and the size structure of natural planktonic food webs may provide essential information to understand the fate of mercury and, in particular, the bioaccumulation pattern of Hg2+ in the water column of lake ecosystems. Heterotrophic and autotrophic picoplankton and phytoplankton are the most important entry points for Hg in aquatic ecosystems since they concentrate Hg2+ and MeHg from ambient water, making them available to planktonic consumers at higher trophic levels of lake food webs. In this investigation we studied the uptake of 197Hg2+ in natural plankton assemblages from four Andean lakes (Nahuel Huapi National Park, Patagonia, Argentina, comprised in the size fractions 0.2-2.7 μm (picoplankton, 0.2-20 μm (pico and nanoplankton and 20-50 μm (microplankton through experiments using Hg2+ labeled with 197Hg2+. The experimental results showed that the uptake of Hg2+ was highest in the smallest plankton fractions (0.2-2.7 μm and 0.2-20 μm compared to the larger fraction comprising microplankton (20-50 um. This pattern was consistent in all lakes, reinforcing the idea that among pelagic organisms, heterotrophic and autotrophic bacteria with the contribution of nanoflagellates and dinoflagellates constitute the main entry point of Hg2+ to the pelagic food web. Moreover, a significant direct relationship was found between the Hg2+ uptake and surface index of the planktonic fractions (SIf. Thus, the smaller planktonic fractions which bore the higher SI were the major contributors to the Hg2+ passing from the abiotic to the biotic pelagic compartments of these Andean lakes.

  14. Temporal variations in the diet of the exotic rainbow trout (Oncorhynchus mykiss in an Andean-Patagonian canopied stream Variación temporal en la dieta de la trucha exótica arco iris (Oncorhynchus mykiss en un arroyo forestado de los Andes patagónicos

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    LEONARDO M BURIA

    2009-03-01

    Full Text Available We examined seasonal and diel variation in prey species composition and biomass in the diet of the exotic rainbow trout Oncorhynchus mykiss (Walbaum, 1972. The study was carried out in the upper-forested sections of a low order stream in Andean-Patagonia. We studied the importance of functional feeding groups of aquatic invertebrates and the relative contribution of terrestrial and aquatic prey items in order to assess the pathways connecting terrestrial and aquatic ecosystems along a stream food web. Trout fed on approximately 40 invertebrate species and scrapers were consistently selected, suggesting their increased vulnerability to predation. However in terms of biomass, rainbow trout diet was mostly composed by shredders which emphasized the role of the allochthonous plant detritus pathway in food webs of forested small streams. Trout individuals fed more intensively in spring and summer and during daytime. Terrestrial items constituted a minor proportion of the diet implying that this component did not represent a significant subsidy for this fish population. As a consequence, the top-down effect on the aquatic community does not appear to be dampened since trout do not strongly preyed on terrestrial invertebrates.Se estudió la variación estacional y diaria en la composición y biomasa de las especies presa en la dieta de la exótica trucha arco iris Oncorhynchus mykiss (Walbaum, 1972 en la sección superior de un arroyo boscoso de bajo orden en los Andes patagónicos. Se analizó la importancia de los grupos funcionales alimentarios de invertebrados acuáticos y la contribución relativa de las presas de origen terrestre y acuático para evaluar las vías tróficas que conectan los ecosistemas acuático y terrestre circundantes. Las truchas consumieron aproximadamente unas 40 especies de invertebrados y los raspadores fueron consistentemente seleccionados, sugiriendo una alta vulnerabilidad a la depredación. Sin embargo en términos de

  15. Distribution of detritivores in tropical forest streams of peninsular Malaysia: role of temperature, canopy cover and altitude variability

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    Che Salmah, Md Rawi; Al-Shami, Salman Abdo; Abu Hassan, Ahmad; Madrus, Madziatul Rosemahanie; Nurul Huda, Abdul

    2014-07-01

    The diversity and abundance of macroinvertebrate shredders were investigated in 52 forested streams (local scale) from nine catchments (regional scale) covering a large area of peninsular Malaysia. A total of 10,642 individuals of aquatic macroinvertebrates were collected, of which 18.22 % were shredders. Biodiversity of shredders was described by alpha (αaverage ), beta (β) and gamma diversity (γ) measures. We found high diversity and abundance of shredders in all catchments, represented by 1,939 individuals (range 6-115 and average per site of 37.29 ± 3.48 SE) from 31 taxa with 2-13 taxa per site (αaverage = 6.98 ± 0.33 SE) and 10-15 taxa per catchment (γ = 13.33 ± 0.55 SE). At the local scale, water temperature, stream width, depth and altitude were correlated significantly with diversity (Adj- R 2 = 0.205). Meanwhile, dissolved oxygen, stream velocity, water temperature, stream width and altitude were correlated to shredder abundance (Adj- R 2 = 0.242). At regional scale, however, water temperature was correlated negatively with β and γ diversity ( r 2 = 0.161 and 0.237, respectively) as well as abundance of shredders ( r 2 = 0.235). Canopy cover was correlated positively with β diversity ( r 2 = 0.378) and abundance ( r 2 = 0.266), meanwhile altitude was correlated positively with β (quadratic: r 2 = 0.175), γ diversity (quadratic: r 2 = 0.848) as well as abundance (quadratic: r 2 = 0.299). The present study is considered as the first report describing the biodiversity and abundance of shredders in forested headwater streams across a large spatial scale in peninsular Malaysia. We concluded that water temperature has a negative effect while altitude showed a positive relationship with diversity and abundance of shredders. However, it was difficult to detect an influence of canopy cover on shredder diversity.

  16. Cenozoic intraplate tectonics in Central Patagonia: Record of main Andean phases in a weak upper plate

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    Gianni, G. M.; Echaurren, A.; Folguera, A.; Likerman, J.; Encinas, A.; García, H. P. A.; Dal Molin, C.; Valencia, V. A.

    2017-11-01

    Contraction in intraplate areas is still poorly understood relative to similar deformation at plate margins. In order to contribute to its comprehension, we study the Patagonian broken foreland (PBF) in South America whose evolution remains controversial. Time constraints of tectonic events and structural characterization of this belt are limited. Also, major causes of strain location in this orogen far from the plate margin are enigmatic. To unravel tectonic events, we studied the Cenozoic sedimentary record of the central sector of the Patagonian broken foreland (San Bernardo fold and thrust belt, 44°30‧S-46°S) and the Andes (Meseta de Chalia, 46°S) following an approach involving growth-strata detection, U-Pb geochronology and structural modeling. Additionally, we elaborate a high resolution analysis of the effective elastic thickness (Te) to examine the relation between intraplate contraction location and variations in lithospheric strength. The occurrence of Eocene growth-strata ( 44-40 Ma) suggests that contraction in the Andes and the Patagonian broken foreland was linked to the Incaic phase. Detection of synextensional deposits suggests that the broken foreland collapsed partially during Oligocene to early Miocene. During middle Miocene times, the Quechua contractional phase produced folding of Neogene volcanic rocks and olistostrome deposition at 17 Ma. Finally, the presented Te map shows that intraplate contraction related to Andean phases localized preferentially along weak lithospheric zones (Te < 15 km). Hence, the observed strain distribution in the PBF appears to be controlled by lateral variations in the lithospheric strength. Variations in this parameter could be related to thermo-mechanical weakening produced by intraplate rifting in Paleozoic-Mesozoic times.

  17. Macrophyte Communities of Andean Rivers: Composition and Relation with Environmental Factors

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    Alida Marcela Gómez Rodríguez; Luz Teresa Valderrama Valderrama; Carlos A. Rivera-Rondón

    2017-01-01

    Small streams of tropical Andes have been poorly studied. Therefore, there is little information about the structure, dynamics and function of their macrophyte communities. In this research, aquatic plant communities of 18 Andean streams of La Vieja (Quindío) and Otún (Risaralda) river basins were studied; those are some of the basins most affected by anthropic activities in the country. Streams were selected according to their association with the main land’s uses of the region in both basin...

  18. Spring northward juvenile migration of the Patagonian grenadier (Macruronus magellanicus from the Northwest Patagonian waters of Chile

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    Luis A Cubillos

    2015-11-01

    Full Text Available Important nursery grounds for Patagonian grenadier (Macruronus magellanicus are located mainly in the Northwest Patagonian Inner Sea (42ºS-44ºS, from which juvenile must to disperse or migrate offshore, then along the Chilean coast either northward or southward. The objective of this paper was to estimate northward spring juvenile migration of the Patagonian grenadier from nursery to feeding areas, which are located near Talcahuano (35º00’S-37º10’S. Length-frequency data (LFD were obtained from an acoustic survey carried out in November 1999, which covered from 35ºS to 47ºS. Generalized linear model was used to describe the presence of juvenile per latitude and depth, and to infer the origin and displacement of juveniles. Subsequently, LFD data were grouped according to latitudinal strata. Grouped LFD were decomposed into normal component groups, from which mean, standard deviation and proportion were estimated from the mixed LFD. The average length of the identified groups were sorted from south to north, and linked to compute significant increment in fish length and age per kilometers. The length increment per time was not due to growth, rather they was due to spatial displacement of juvenile from southern nursery grounds to northern feeding areas. Although homing to feeding areas and/or high residency (partial migration have been postulated, it seems that recruitment of juveniles to northern feeding areas are origintaed from NPIS nurseries. The West Wind Drift Current seems to be the main drive for dispersion of Patagonian grenadier to recruit northward in open waters along the continental shelf.

  19. Global pressures, specific responses: effects of nutrient enrichment in streams from different biomes

    International Nuclear Information System (INIS)

    Artigas, Joan; García-Berthou, Emili; Gómez, Nora; Romaní, Anna M; Sabater, Sergi; Bauer, Delia E; Cochero, Joaquín; Cortelezzi, Agustina; Rodrigues-Capítulo, Alberto; Castro, Maria I; Donato, John C; Colautti, Darío C; Elosegi, Arturo; Feijoó, Claudia; Giorgi, Adonis; Leggieri, Leonardo; Muñoz, Isabel

    2013-01-01

    We assessed the effects of nutrient enrichment on three stream ecosystems running through distinct biomes (Mediterranean, Pampean and Andean). We increased the concentrations of N and P in the stream water 1.6–4-fold following a before–after control–impact paired series (BACIPS) design in each stream, and evaluated changes in the biomass of bacteria, primary producers, invertebrates and fish in the enriched (E) versus control (C) reaches after nutrient addition through a predictive-BACIPS approach. The treatment produced variable biomass responses (2–77% of explained variance) among biological communities and streams. The greatest biomass response was observed for algae in the Andean stream (77% of the variance), although fish also showed important biomass responses (about 9–48%). The strongest biomass response to enrichment (77% in all biological compartments) was found in the Andean stream. The magnitude and seasonality of biomass responses to enrichment were highly site specific, often depending on the basal nutrient concentration and on windows of ecological opportunity (periods when environmental constraints other than nutrients do not limit biomass growth). The Pampean stream, with high basal nutrient concentrations, showed a weak response to enrichment (except for invertebrates), whereas the greater responses of Andean stream communities were presumably favored by wider windows of ecological opportunity in comparison to those from the Mediterranean stream. Despite variation among sites, enrichment globally stimulated the algal-based food webs (algae and invertebrate grazers) but not the detritus-based food webs (bacteria and invertebrate shredders). This study shows that nutrient enrichment tends to globally enhance the biomass of stream biological assemblages, but that its magnitude and extent within the food web are complex and are strongly determined by environmental factors and ecosystem structure. (letter)

  20. Structural control on arc volcanism: The Caviahue Copahue complex, Central to Patagonian Andes transition (38°S)

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    Melnick, Daniel; Folguera, Andrés; Ramos, Victor A.

    2006-11-01

    This paper describes the volcanostratigraphy, structure, and tectonic implications of an arc volcanic complex in an oblique subduction setting: the Caviahue caldera Copahue volcano (CAC) of the Andean margin. The CAC is located in a first-order morphotectonic transitional zone, between the low and narrow Patagonian and the high and broad Central Andes. The evolution of the CAC started at approximately 4-3 Ma with the opening of the 20 × 15 km Caviahue pull-apart caldera; Las Mellizas volcano formed inside the caldera and collapsed at approximately 2.6 Ma; and the Copahue volcano evolved in three stages: (1) 1.2-0.7 Ma formed the approximately 1 km thick andesitic edifice, (2) 0.7-0.01 Ma erupted andesitic-dacitic subglacial pillow lavas, and (3) 0.01-0 Ma erupted basaltic-andesites and pyroclastic flows from fissures, aligned cones, and summit craters. Magma ascent has occurred along planes perpendicular to the least principal horizontal stress, whereas hydrothermal activity and hot springs also occur along parallel planes. At a regional scale, Quaternary volcanism concentrates along the NE-trending, 90 km long Callaqui-Copahue-Mandolegüe lineament, the longest of the southern volcanic zone, which is here interpreted as an inherited crustal-scale transfer zone from a Miocene rift basin. At a local scale within the CAC, effusions are controlled by local structures that formed at the intersection of regional fault systems. The Central to Patagonian Andes transition occurs at the Callaqui-Copahue-Mandolegüe lineament, which decouples active deformation from the intra-arc strike-slip Liquiñe-Ofqui fault zone to the south and the backarc Copahue-Antiñir thrust system.

  1. Uptake of Hg2+ by picocyanobacteria in natural water from four Andean lakes

    Directory of Open Access Journals (Sweden)

    Diéguez M.C.

    2014-07-01

    Full Text Available In lake food webs, planktonic bacteria and algae represent the greatest bioconcentration step for Hg2+ and monomethyl-Hg (MeHg. As they are the most abundant organisms in planktonic trophic webs and also the main food resource for herbivorous plankton, they can mobilize large amounts of Hg to higher trophic levels. In Andean Patagonian lakes (Argentina, dissolved organic matter (DOM concentration and character, coupled with photo-reactions, play a central role in the complexation of Hg2+ in the water column and can even regulate the uptake of Hg2+ by planktonic algae. In this investigation we evaluated the DOM character of natural waters (NW from four Andean lakes and studied its influence on the uptake of 197Hg2+ in a strain of the picocyanobacteria Synechococcus by using Hg2+ labeled with 197Hg2+. The uptake of radiolabeled Hg2+ by Synechococcus showed different magnitude in NW of lakes Moreno, El Trébol, Morenito and Escondido. Increasing lake DOM concentration reduced the bioavailability of Hg2+ as indicated by the lower uptakes rates found in NW with higher complexity and concentration of the DOM pool. Uptakes of Hg2+ by this picocyanobacteria contrasted among NW from pelagic (surface and bottom and littoral compartments of Lake Escondido which suggest that the entry of this metal may be highly variable even in the same environment. The study of the uptake of radiolabeled Hg2+ in a set of dilutions of NW from Lake Escondido demonstrated that the bioavailability of Hg2+ decrease with increasing DOM concentration.

  2. Didymosphenia geminata invasion in South America: Ecosystem impacts and potential biogeochemical state change in Patagonian rivers

    Science.gov (United States)

    Reid, Brian; Torres, Rodrigo

    2014-01-01

    The diatom Didymosphenia geminata has emerged as a major global concern, as both an aggressive invader of rivers and streams in the southern hemisphere, and for its ability to form nuisance blooms in oligotrophic systems in its native range. South American D. geminata blooms were first documented in Chilean Patagonia in May 2010, and have spread to over five regions and three provinces, in Chile and Argentina respectively. The Patagonian invasion represents a distinct challenge compared to other regions; not only are affected systems poorly characterized, but also a general synthesis of the nature and magnitude of ecosystem impacts is still lacking. The latter is essential in evaluating impacts to ecosystem services, forms the basis for a management response that is proportional to the potentially valid threats, or aids in the determination of whether action is warranted or feasible. Based on a revision of the recent literature, some of the most significant impacts may be mediated through physical changes: substantially increased algal biomass, trapping of fine sediment, altered hydrodynamics, and consequent effects on biogeochemical states and processes such as redox condition, pH and nutrient cycling in the benthic zone. Surveys conducted during the early invasion in Chile show a strong correlation between benthic biomass and associated fine sediments, both of which were one-two orders of magnitude higher within D. geminata blooms. Experimental phosphorous amendments showed significant abiotic uptake, while interstitial water in D. geminata mats had nearly 10-20 fold higher soluble reactive phosphorous and a pronounced pH cycle compared to the water column. A dominant and aggressive stalk-forming diatom with this combination of characteristics is in sharp contrast to the colonial cyanobacteria and bare gravel substrate that characterize many Patagonian streams. The potential displacement of native benthic algal communities with contrasting functional groups

  3. The endemic Patagonian vespertilionid assemblage is a depauperate ecomorphological vicariant of species-rich neotropical assemblages

    Institute of Scientific and Technical Information of China (English)

    Analía L.GIM(E)NEZ; Norberto P. GIANNINI

    2017-01-01

    Vespertilionidae is the most diverse chiropteran family,and its diversity is concentrated in warm regions of the World;however,due to physiological and behavioral adaptations,these bats also dominate bat faunas in temperate regions.Here we performed a comparative study of vespertilionid assemblages from two broad regions of the New World,the cold and harsh Patagonia,versus the remaining temperate-to-subtropical,extra-Patagonian eco-regions of the South American Southern Cone.We took an ecomorphological approach and analyzed the craniodental morphological structure of these assemblages within a phylogenetic framework.We measured 17 craniodental linear variables from 447 specimens of 22 currently recognized vespertilionid species of the study regions.We performed a multivariate analysis to define the morphofunctional space,and calculated the pattern and degree of species packing for each assemblage.We assessed the importance of phylogeny and biogeography,and their impact on depauperate (Patagonian) versus rich (extra-Patagonian) vespertilionid assemblages as determinants of morphospace structuring.We implemented a sensitivity analysis associated to small samples of rare species.The morphological patterns were determined chiefly by the evolutionary history of the family.The Patagonian assemblage can be described as a structurally similar but comparatively depauperate ecomorphological version of those assemblages from neighboring extra-Patagonian eco-regions.The Patagonian assemblage seems to have formed by successively adding populations from Northern regions that eventually speciated in the region,leaving corresponding sisters (vicariants) in extraPatagonian eco-regions that continued to be characteristically richer.Despite being structurally akin,degree of species packing in Patagonia was comparatively very low,which may reflect the effect of limited dispersal success into a harsh region for bat survival.

  4. Synoptic events force biological productivity in Patagonian fjord ecosystems

    Science.gov (United States)

    Daneri, Giovanni

    2016-04-01

    The annual cycle of primary productivity of the Patagonian fjords has, to date, been described as a two phase system consisting of a short non productive winter phase (during June and July) and a productive phase extending from late winter (August) to autumn (May). Low levels of primary production, phytoplankton biomass and high concentrations of surface nutrients have been described as characterizing winter conditions while pulsed productivity events typifies the productivity pattern during the extended productive season. Pulsed productivity events characterize coastal waters where inorganic nutrients in surface layers are replenished following periods of intensive utilization by autotrophs. Freshwater input in Patagonian fjords in southern Chile (41-55°S) results in one of the largest estuarine regions worldwide. Here strong haline water column stratification prevents nutrient mixing to the surface layers thus potentially shutting off algal production. Our working hypothesis considered that in order to reconcile the observed pulsed productivity pattern, periodic breaking (associated to surface nutrient replenishment) and re-establishment of estuarine conditions (associated to water column stratification) would be required. Up to now however our understanding of the physical processes that control water column conditions in the Patagonian fjord area has been extremely limited. Here we present evidence linking the passage of synoptic low pressure fronts to pulsed productivity events in the Patagonian fjord area. These front controls and influence local processes of interaction between the fjord and the atmosphere generating a rapid water column response. In the specific case of the Puyuhuapi fjord we have been able to show that such synoptic fronts induce surface flow reversal and water column mixing. Phytoplankton blooming occurs after the passage of the synoptic front once calmer conditions prevail and estuarine conditions are re established. The occurrence of

  5. Trace-element and Sr, Nd, Pb, and O isotopic composition of Pliocene and Quaternary alkali basalts of the Patagonian Plateau lavas of southernmost South America

    Science.gov (United States)

    Stern, C.R.; Frey, F.A.; Futa, K.; Zartman, R.E.; Peng, Z.; Kurtis, Kyser T.

    1990-01-01

    The Pliocene and Quaternary Patagonian alkali basalts of southernmost South America can be divided into two groups. The "cratonic" basalts erupted in areas of Cenozoic plateau volcanism and continental sedimentation and show considerable variation in 87Sr/86Sr (0.70316 to 0.70512), 143Nd/144Nd (e{open}Nd) and 206Pb/204Pb, 207Pb/204Pb, and 208Pb/204Pb ratios (18.26 to 19.38, 15.53 to 15.68, and 38.30 to 39.23, respectively). These isotopic values are within the range of oceanic island basalts, as are the Ba/La, Ba/Nb, La/Nb, K/Rb, and Cs/Rb ratios of the "cratonic" basalts. In contrast, the "transitional" basalts, erupted along the western edge of the outcrop belt of the Pliocene and Quaternary plateau lavas in areas that were the locus of earlier Cenozoic Andean orogenic arc colcanism, have a much more restricted range of isotopic composition which can be approximated by 87Sr/86Sr=0.7039??0.0004, e{open}Nd, 206Pb/204Pb=18.60??0.08, 207Pb/204Pb=15.60??0.01, and 208Pb/204Pb=38.50??0.10. These isotopic values are similar to those of Andean orogenic are basalts and, compared to the "cratonic" basalts, are displaced to higher 87Sr/86Sr at a given 143Nd/144Nd and to higher 207Pb/204Pb at a given 208Pb/204Pb. The "transitional" basalts also have Ba/La, Ba/Nb, La/Nb, and Cs/Rb ratios higher than the "cratonic" and oceanic island basalts, although not as high as Andean orogenic are basalts. In contrast to the radiogenic isotopes, ??18O values for both groups of the Patagonian alkali basalts are indistinguishable and are more restricted than the range reported for Andean orogenic are basalts. Whole rock ??18O values calculated from mineral separates for both groups range from 5.3 to 6.5, while measured whole rock ??18O values range from 5.1 to 7.8. The trace element and isotopic data suggest that decreasing degrees of partial melting in association with lessened significance of subducted slabderived components are fundamental factors in the west to east transition from arc

  6. 77 FR 31039 - Andean Trade Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication

    Science.gov (United States)

    2012-05-24

    .... 332-352, Andean Trade Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication... INTERNATIONAL TRADE COMMISSION [Investigation No. 332-352] Andean Trade Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication AGENCY: United States International Trade...

  7. Null models for study Rotifers and Crustaceans Zooplankton species richness in Chilean Patagonian lakes

    OpenAIRE

    Escalante, Patricio de los Ríos

    2016-01-01

    Abstract Aims The Patagonian lakes are characterized by their oligotrophy that is the cause of low species number in their zooplankton assemblage. The aim of the present study is to analyze the crustacean and rotifers species number pattern in Patagonian lakes among a latitudinal gradient (40-51 °S). Results The results revealed that there are direct significant correlations between total species with rotifer species, and chlorophyll concentration with crustacean species number, and an inve...

  8. Administrative Law in the Andean Community of Nations

    Directory of Open Access Journals (Sweden)

    Jorge Enrique Santos Rodríguez

    2013-12-01

    Full Text Available One of the contemporary tendencies of Administrative Law is the recognition of its existence beyond the borders of a State. Under such premise, this paper aims to demonstrate that in the Andean Community of Nations sufficient elements to consider the existence of an Andean administrative Law. In the Andean statutes and rules, it is possible to identify an administrative function, as well as an administrative organization inside the Andean Integration System; and a system of Andean administrative rules and an administrative justice system.

  9. Natural Environmental Hazards Reflected in High-Altitude Patagonian Lake Sediments (lake Caviahue, Argentina)

    Science.gov (United States)

    Müller, Anne; Scharf, Burkhard; von Tümpling, Wolf; Pirrung, Michael

    2009-03-01

    Two 6-m long sediment cores drilled in the two basins of Lake Caviahue give new evidence of the impact of natural hazards such as ash fallouts linked to nearby volcanic eruptions in the ecologically sensitive environment of the high-altitude region of the Argentinan Patagonian Andes. The two cores show distinct signals of changes in autochthonous productivity and terrigenous input into the lake from ash fallout as well as from river load and shore erosion. Multiproxy records of the sediments indicate whether these changes can be related to volcanic activity. High values of magnetic susceptibility in the cores reflect periods of basaltic ash fallouts during eruptions of the nearby Copahue Volcano. The southern basin is located in the prevalent direction of ash fallouts and has been affected by these volcanic inputs more intensely than the northern basin of the lake. In contrast, sedimentation and authochthonous productivity in the northern basin are strongly affected by fluvial inputs such as suspended river load and acidic stream waters.

  10. 75 FR 24967 - Andean Trade Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication

    Science.gov (United States)

    2010-05-06

    ... Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication. DATES: June 24, 2010... INTERNATIONAL TRADE COMMISSION [Investigation No. 332-352] Andean Trade Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication AGENCY: United States International Trade...

  11. Macrophyte Communities of Andean Rivers: Composition and Relation with Environmental Factors

    Directory of Open Access Journals (Sweden)

    Alida Marcela Gómez Rodríguez

    2017-01-01

    Full Text Available Small streams of tropical Andes have been poorly studied. Therefore, there is little information about the structure, dynamics and function of their macrophyte communities. In this research, aquatic plant communities of 18 Andean streams of La Vieja (Quindío and Otún (Risaralda river basins were studied; those are some of the basins most affected by anthropic activities in the country. Streams were selected according to their association with the main land’s uses of the region in both basins. The aim of the study was to evaluate the effect of land use on the structure of macrophyte communities. Streams running exclusively through each land use were selected. Sampling was done in two different climatic seasons of year 2006. Vegetation found (54 species belonging to 25 families was dominated by species with high capability of adaptation to changing and disturbed environments. Richness and abundance of macrophytes were lower than those reported in other tropical aquatic systems. Variables associated with land use, such as temperature, conductivity and type of substrate of the streams mainly explained the structure of the macrophyte communities: streams running on meat-cattle areas -with higher temperatures, conductivity and dominance of sandy-slimy substrates- had higher macrophyte species richness and abundance than streams of protected-forest areas, with higher coverage by riparian vegetation, lower temperatures and conductivity and rocky substrates.

  12. Aquatic insect emergence from headwater streams flowing through regeneration and mature forests in western Oregon

    Science.gov (United States)

    Robert Progar; Andrew R. Moldenke

    2009-01-01

    We examined the effect of canopy cover on adult aquatic insect emergence by collecting bi-weekly samples from twelve headwater stream reaches flowing either under a mature conifer canopy or streams flowing through ten-year-old regeneration in western Oregon from February to November 1997. Density and biomass generally followed a bimodal curve with peaks during early...

  13. Canopy Version 7.0: Canopy manual

    International Nuclear Information System (INIS)

    Fischler, M.; Uchima, M.; Hockney, G.; Mackenzie, P.

    1993-12-01

    Canopy provides a machine-independent environment for attacking grid-oriented problems. This document describes the concepts and routines common to all Canopy implementations, independent of the system and implementation. Information specific to the massively parallel ACPMAPS/indexACPMAPS system at FermiLab is contained in two other documents: The CANOPY ACPMAPS USER's GUIDE provides user-oriented instructions on compiling, running, file system usage, and production job control. The CANOPY ACPMAPS SYSTEM MANUAL describes system tools and installation and system management techniques. System-specific User's Guides may be created for implementations on other systems. The goal of Canopy is to allow scientists to use massively parallel systems for a broad class of applications without having to become expert in any particular system or in parallel programming techniques. The Canopy approach identifies grid-oriented concepts and implements them as routines in a library. Applications written in terms of these concepts will run on any system which supports the Canopy software. A side benefit in dealing with familiar concepts is that programs can more easily be understood by other researchers

  14. Patagonian and southern South Atlantic view of Holocene climate

    Science.gov (United States)

    Kaplan, M. R.; Schaefer, J. M.; Strelin, J. A.; Denton, G. H.; Anderson, R. F.; Vandergoes, M. J.; Finkel, R. C.; Schwartz, R.; Travis, S. G.; Garcia, J. L.; Martini, M. A.; Nielsen, S. H. H.

    2016-06-01

    We present a comprehensive 10Be chronology for Holocene moraines in the Lago Argentino basin, on the east side of the South Patagonian Icefield. We focus on three different areas, where prior studies show ample glacier moraine records exist because they were formed by outlet glaciers sensitive to climate change. The 10Be dated records are from the Lago Pearson, Herminita Península-Brazo Upsala, and Lago Frías areas, which span a distance of almost 100 km adjacent to the modern Icefield. New 10Be ages show that expanded glaciers and moraine building events occurred at least at 6120 ± 390 (n = 13), 4450 ± 220 (n = 7), 1450 or 1410 ± 110 (n = 18), 360 ± 30 (n = 5), and 240 ± 20 (n = 8) years ago. Furthermore, other less well-dated glacier expansions of the Upsala Glacier occurred between 1400 and ∼1000 and ∼2300 and ∼2000 years ago. The most extensive glaciers occurred over the interval from ∼6100 to ∼4500 years ago, and their margins over the last ∼600 years were well within and lower than those in the middle Holocene. The 10Be ages agree with 14C-limiting data for the glacier histories in this area. We then link southern South American, adjacent South Atlantic, and other Southern Hemisphere records to elucidate broader regional patterns of climate and their possible causes. In the early Holocene, a far southward position of the westerly winds fostered warmth, small Patagonian glaciers, and reduced sea ice coverage over the South Atlantic. Although we infer a pronounced southward displacement of the westerlies during the early Holocene, these conditions did not occur throughout the southern mid-high latitudes, an important exception being over the southwest Pacific sector. Subsequently, a northward locus and/or expansion of the winds over the Patagonia-South Atlantic sector promoted the largest glaciers between ∼6100 and ∼4500 years ago and greatest sea ice coverage. Over the last few millennia, the South Patagonian Icefield has experienced

  15. Testate amoebae communities sensitive to surface moisture conditions in Patagonian peatlands

    Science.gov (United States)

    Loisel, J.; Booth, R.; Charman, D.; van Bellen, S.; Yu, Z.

    2017-12-01

    Here we examine moss surface samples that were collected during three field campaigns (2005, 2010, 2014) across southern Patagonian peatlands to assess the potential use of testate amoebae and 13C isotope data as proxy indicators of soil moisture. These proxies have been widely tested across North America, but their use as paleoecological tools remains sparse in the southern hemisphere. Samples were collected along a hydrological gradient spanning a range of water table depth from 0cm in wet hollows to over 85cm in dry hummocks. Moss moisture content was measured in the field. Over 25 taxa were identified, with many of them not found in North America. Ordinations indicate statistically significant and dominant effects of soil moisture and water table depth on testate assemblages, though interestingly 13C is even more strongly correlated with testates amoebae than direct soil conditions. It is possible that moss 13C signature constitutes a compound indicator that represents seasonal soil moisture better than opportunistic sampling during field campaigns. There is no significant effect of year or site across the dataset. In addition to providing a training set that translates testate amoebae moisture tolerance range into water tabel depth for Patagonian peatlands, we also compare our results with those from the North American training set to show that, despite 'novel' Patagonian taxa, the robustness of international training sets is probably sufficient to quantify most changes in soil moisture from any site around the world. We also identify key indicator species that are shown to be of universal value in peat-based hydrological reconstructions.

  16. Evaluating radiative transfer schemes treatment of vegetation canopy architecture in land surface models

    Science.gov (United States)

    Braghiere, Renato; Quaife, Tristan; Black, Emily

    2016-04-01

    Incoming shortwave radiation is the primary source of energy driving the majority of the Earth's climate system. The partitioning of shortwave radiation by vegetation into absorbed, reflected, and transmitted terms is important for most of biogeophysical processes, including leaf temperature changes and photosynthesis, and it is currently calculated by most of land surface schemes (LSS) of climate and/or numerical weather prediction models. The most commonly used radiative transfer scheme in LSS is the two-stream approximation, however it does not explicitly account for vegetation architectural effects on shortwave radiation partitioning. Detailed three-dimensional (3D) canopy radiative transfer schemes have been developed, but they are too computationally expensive to address large-scale related studies over long time periods. Using a straightforward one-dimensional (1D) parameterisation proposed by Pinty et al. (2006), we modified a two-stream radiative transfer scheme by including a simple function of Sun zenith angle, so-called "structure factor", which does not require an explicit description and understanding of the complex phenomena arising from the presence of vegetation heterogeneous architecture, and it guarantees accurate simulations of the radiative balance consistently with 3D representations. In order to evaluate the ability of the proposed parameterisation in accurately represent the radiative balance of more complex 3D schemes, a comparison between the modified two-stream approximation with the "structure factor" parameterisation and state-of-art 3D radiative transfer schemes was conducted, following a set of virtual scenarios described in the RAMI4PILPS experiment. These experiments have been evaluating the radiative balance of several models under perfectly controlled conditions in order to eliminate uncertainties arising from an incomplete or erroneous knowledge of the structural, spectral and illumination related canopy characteristics typical

  17. Exploring the potential of an Andean fruit

    NARCIS (Netherlands)

    Olivares Tenorio, Mary Luz

    2017-01-01

    Cape gooseberry is a fruit cultivated in Andean countries. Currently it is available some international markets, besides the domestic Andean market. Colombia is the major producer and export country at the moment. The value chain of cape gooseberry faces several barriers of technological and

  18. The influence of light, stream gradient, and iron on Didymosphenia geminata bloom development in the Black Hills, South Dakota

    Science.gov (United States)

    James, Daniel A.; Mosel, Kyle; Chipps, Steven R.

    2014-01-01

    The aquatic nuisance species Didymosphenia geminata was first documented in Rapid Creek of South Dakota’s Black Hills during 2002. Since then, blooms have occurred primarily in a 39-km section of Rapid Creek while blooms were rarely observed in other Black Hills streams. In this study, we evaluated factors related to the presence and development of visible colonies of D. geminata in four streams of the Black Hills. At the watershed scale, stream gradient was negatively associated with the occurrence of D. geminata whereas stream width was positively related to D. geminata presence. At the stream scale, D. geminata coverage was inversely related to canopy coverage and iron concentration. At the local scale, shading by bridges virtually eliminated growth of D. geminata colonies under bridges. At all three scales, proxy measures of light such as stream width, canopy coverage, and bridge shading revealed that light availability was an important factor influencing the presence and coverage of D. geminata colonies. In general, streams that had relatively wide stream reaches (mean = 9.9 m), shallow gradients (mean = 0.22%), and little canopy cover (mean = 13%) were associated with D. geminata blooms. In addition, iron concentrations in streams with D. geminata colonies were lower than in streams without blooms.

  19. Two new Cystoderma species from high Andean Ecuador

    DEFF Research Database (Denmark)

    Saar, I.; Læssøe, Thomas

    2006-01-01

    ABSTRACT: Two new agaric species, Cystoderma andinum and C. papallactae are described from high Andean Ecuador.......ABSTRACT: Two new agaric species, Cystoderma andinum and C. papallactae are described from high Andean Ecuador....

  20. Hemoglobin affinity in Andean rodents

    Directory of Open Access Journals (Sweden)

    HRVOJ OSTOJIC

    2002-01-01

    Full Text Available Blood hemoglobin oxygen affinity (P50 was measured in three Andean species and in the laboratory rat (control, all raised near sea level. Chinchilla lanigera (Molina, 1792 has an altitudinal habitat range from low Andean slopes up to 3000 m., while Chinchilla brevicaudata (Waterhouse, 1848 has an altitudinal range from 3000 to 5000 m. The laboratory type guinea pig, wild type guinea pig (Cavia porcellus, (Waterhouse, 1748, and laboratory rat (Rattus norvegicus were also raised at sea level. The Andean species had high hemoglobin oxygen affinities (low P50 compared with the rat. Chinchilla brevicaudata had a higher affinity than Chinchilla lanigera. The wild type guinea pig had a higher affinity than the laboratory type. As has been shown in other species, this is another example of an inverse correlation between the altitude level and the P50 values. This is the first hemoglobin oxygen affinity study in Chinchilla brevicaudata.

  1. 77 FR 28620 - Andean Trade Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication

    Science.gov (United States)

    2012-05-15

    ... INTERNATIONAL TRADE COMMISSION [Investigation No. 332-352] Andean Trade Preference Act: Impact on the U.S. Economy and on Andean Drug Crop Eradication AGENCY: United States International Trade... to report biennially to the Congress by September 30 of each reporting year on the economic impact of...

  2. Numerical modelling of the M2 tide on the northern Patagonian Shelf

    Science.gov (United States)

    Glorioso, P. D.; Simpson, J. H.

    1994-02-01

    The previously reported occurrence of tidal fronts on the Patagonian Shelf ( CARRETOet al., 1986 , Journal of Plankton Research, 8, 15-28; GLORIOSO, 1987 , Continental Shelf Research, 7, 27-34), motivated the application of a numerical model to solve the shallow-water equations with external forcing by the principal-lunar semidiurnal tide (M2) prescribed along the open boundary. The mean width of the Patagonian Shelf is comparable with a quarter wavelength of the semidiurnal tide, giving the conditions for standing wave resonance at that frequency ( WEBB, 1975 , Deep-Sea Research, 23, 1-15). The region is well recognized by its large tidal elevations and by the speed of the tidal wave changing phase very rapidly. Some of the results obtained from the modelling exercise include the mapping of the M2 tidal constants, the Simpson-Hunter stratification parameter, the mean sea surface elevation, and the distribution of tidal energy dissipation by bottom friction. These results agree qualitatively with the ship data available and with satellite infrared imagery.

  3. Effects of riparian canopy opening and salmon carcass addition on the abundance and growth of resident salmonids

    Science.gov (United States)

    Margaret A. Wilzbach; Bret C. Harvey; Jason L. White; Rodney J. Nakamoto

    2005-01-01

    We studied the concurrent effects of riparian canopy opening and salmon carcass addition on salmonid biomass, density and growth rates in small streams over 2 years. In each of six streams in the Smith and Klamath River basins in northern California, red alder (Alnus rubra) and other hardwoods were removed along both banks of a 100-m reach to...

  4. Drivers of nitrogen transfer in stream food webs across continents.

    Science.gov (United States)

    Norman, Beth C; Whiles, Matt R; Collins, Sarah M; Flecker, Alexander S; Hamilton, Steve K; Johnson, Sherri L; Rosi, Emma J; Ashkenas, Linda R; Bowden, William B; Crenshaw, Chelsea L; Crowl, Todd; Dodds, Walter K; Hall, Robert O; El-Sabaawi, Rana; Griffiths, Natalie A; Marti, Eugènia; McDowell, William H; Peterson, Scot D; Rantala, Heidi M; Riis, Tenna; Simon, Kevin S; Tank, Jennifer L; Thomas, Steven A; von Schiller, Daniel; Webster, Jackson R

    2017-12-01

    Studies of trophic-level material and energy transfers are central to ecology. The use of isotopic tracers has now made it possible to measure trophic transfer efficiencies of important nutrients and to better understand how these materials move through food webs. We analyzed data from thirteen 15 N-ammonium tracer addition experiments to quantify N transfer from basal resources to animals in headwater streams with varying physical, chemical, and biological features. N transfer efficiencies from primary uptake compartments (PUCs; heterotrophic microorganisms and primary producers) to primary consumers was lower (mean 11.5%, range 100%). Total N transferred (as a rate) was greater in streams with open compared to closed canopies and overall N transfer efficiency generally followed a similar pattern, although was not statistically significant. We used principal component analysis to condense a suite of site characteristics into two environmental components. Total N uptake rates among trophic levels were best predicted by the component that was correlated with latitude, DIN:SRP, GPP:ER, and percent canopy cover. N transfer efficiency did not respond consistently to environmental variables. Our results suggest that canopy cover influences N movement through stream food webs because light availability and primary production facilitate N transfer to higher trophic levels. © 2017 by the Ecological Society of America.

  5. Glacier shrinkage and water resources in the Andes

    Science.gov (United States)

    Francou, Bernard; Coudrain, Anne

    For more than a century glaciers around the world have been melting as air temperatures rise due to a combination of natural processes and human activity. The disappearance of these glaciers can have wide-ranging effects, such as the creation of new natural hazards or changes in stream flow that could threaten water suppliesSome of the most dramatic melting has occurred in the Andes mountain range in South America. To highlight the climatic and glacial change in the Andes and to encourage the scientific community to strengthen the glacier observation network that stretches from Colombia to the Patagonian ice fields, the Instituto Nacional de Recursos Naturales (INRENA), Perú, and the Institute of Research and Development (IRD), France, recently organized the second Symposium on Mass Balance of Andean Glaciers in Huaráz,Perú.

  6. Oviposition of aquatic insects in a tropical high altitude stream.

    Science.gov (United States)

    Rios-Touma, Blanca; Encalada, A C; Prat, N

    2012-12-01

    The persistence of aquatic insect populations in streams depends on the recruitment of larval populations from egg masses deposited by adults, especially after disturbance. However, recruitment of aquatic populations by oviposition is a process that remains unstudied in streams and rivers. The objectives of our study were to document flying and oviposition patterns of aquatic insects in a high altitude tropical stream during both dry and wet seasons. In particular we studied 1) richness and abundance of adult forms of aquatic insects flying and ovipositing; 2) number of eggs (oviposition pattern), egg mass identity, and morphology; and 3) substrate preferences by ovipositing females. We found 2,383 aquatic insects corresponding to 28 families, with dipterans representing 89% of total individuals collected. Adult insects had lower richness (28 taxa) than larval diversity (up to 52 taxa) and distinct community composition. Richness and relative abundance of most taxa (adults) were not significantly different between seasons, behaviors, diel period, or all three. During both sampling periods we found females with eggs in a total of 15 different families (13 in the dry season and 14 in the wet season). There were no significant differences in the proportion of females with eggs between seasons, diel periods, or different behaviors (flying versus ovipositing traps) of the different female taxa. Few types of egg masses were found in rocks at the stream during both seasons, and most egg masses found corresponded to families Baetidae and Chironomidae. Finally, we provide the first description of eggs masses (size, shape, color, and number of eggs per female) of gravid females (10 taxa) and those found in the stream substrate (six taxa) of Andean macroinvertebrates. This is the first study reporting oviposition, adult diversity, and oviposition patterns of aquatic insects in the Andean region.

  7. Do soil organisms affect aboveground litter decomposition in the semiarid Patagonian steppe, Argentina?

    Science.gov (United States)

    Araujo, Patricia I; Yahdjian, Laura; Austin, Amy T

    2012-01-01

    Surface litter decomposition in arid and semiarid ecosystems is often faster than predicted by climatic parameters such as annual precipitation or evapotranspiration, or based on standard indices of litter quality such as lignin or nitrogen concentrations. Abiotic photodegradation has been demonstrated to be an important factor controlling aboveground litter decomposition in aridland ecosystems, but soil fauna, particularly macrofauna such as termites and ants, have also been identified as key players affecting litter mass loss in warm deserts. Our objective was to quantify the importance of soil organisms on surface litter decomposition in the Patagonian steppe in the absence of photodegradative effects, to establish the relative importance of soil organisms on rates of mass loss and nitrogen release. We estimated the relative contribution of soil fauna and microbes to litter decomposition of a dominant grass using litterboxes with variable mesh sizes that excluded groups of soil fauna based on size class (10, 2, and 0.01 mm), which were placed beneath shrub canopies. We also employed chemical repellents (naphthalene and fungicide). The exclusion of macro- and mesofauna had no effect on litter mass loss over 3 years (P = 0.36), as litter decomposition was similar in all soil fauna exclusions and naphthalene-treated litter. In contrast, reduction of fungal activity significantly inhibited litter decomposition (P soil fauna have been mentioned as a key control of litter decomposition in warm deserts, biogeographic legacies and temperature limitation may constrain the importance of these organisms in temperate aridlands, particularly in the southern hemisphere.

  8. An explicit canopy BRDF model and inversion. [Bidirectional Reflectance Distribution Function

    Science.gov (United States)

    Liang, Shunlin; Strahler, Alan H.

    1992-01-01

    Based on a rigorous canopy radiative transfer equation, the multiple scattering radiance is approximated by the asymptotic theory, and the single scattering radiance calculation, which requires an numerical intergration due to considering the hotspot effect, is simplified. A new formulation is presented to obtain more exact angular dependence of the sky radiance distribution. The unscattered solar radiance and single scattering radiance are calculated exactly, and the multiple scattering is approximated by the delta two-stream atmospheric radiative transfer model. The numerical algorithms prove that the parametric canopy model is very accurate, especially when the viewing angles are smaller than 55 deg. The Powell algorithm is used to retrieve biospheric parameters from the ground measured multiangle observations.

  9. Seafood substitutions obscure patterns of mercury contamination in Patagonian toothfish (Dissostichus eleginoides or "Chilean sea bass".

    Directory of Open Access Journals (Sweden)

    Peter B Marko

    Full Text Available Seafood mislabeling distorts the true abundance of fish in the sea, defrauds consumers, and can also cause unwanted exposure to harmful pollutants. By combining genetic data with analyses of total mercury content, we have investigated how species substitutions and fishery-stock substitutions obscure mercury contamination in Patagonian toothfish (Dissostichus eleginoides, also known as "Chilean sea bass". Patagonian toothfish show wide variation in mercury concentrations such that consumers may be exposed to either acceptable or unacceptable levels of mercury depending on the geographic origins of the fish and the allowable limits of different countries. Most notably, stocks of Patagonian toothfish in Chile accumulate significantly more mercury than stocks closer to the South Pole, including the South Georgia/Shag Rocks stock, a fishery certified by the Marine Stewardship Council (MSC as sustainably fished. Consistent with the documented geography of mercury contamination, our analysis showed that, on average, retail fish labeled as MSC-certified Patagonian toothfish had only half the mercury of uncertified fish. However, consideration of genetic data that were informative about seafood substitutions revealed a complex pattern of contamination hidden from consumers: species substitutions artificially inflated the expected difference in mercury levels between MSC-certified and uncertified fish whereas fishery stock substitutions artificially reduced the expected difference in mercury content between MSC-certified and uncertified fish that were actually D. eleginoides. Among MSC-certified fish that were actually D. eleginoides, several with exogenous mtDNA haplotypes (i.e., not known from the certified fishery had mercury concentrations on par with uncertified fish from Chile. Overall, our analysis of mercury was consistent with inferences from the genetic data about the geographic origins of the fish, demonstrated the potential negative impact of

  10. The new Andean Regional Office of Astronomy for Development (ROAD)

    Science.gov (United States)

    Char, Farid; Forero-Romero, Jaime

    2015-08-01

    The Andean Regional Office of Astronomy for Development (ROAD) is a new effort in South America to serve several goals in astronomical development. Six countries (Bolivia, Colombia, Chile, Ecuador, Perú and Venezuela) will work together, representing a common language block in the Andean region and focusing on develop strategies to strengthen the professional research, education and popularization of astronomy. Our current Working Structure comprises a ROAD Coordinator and Coordinators per Task Force, as well as Organizing Committees, Collaborators and Volunteers.The participating institutions of this new ROAD have been involved in many projects involving each of the current OAD’s Task Forces: research, schools and children and public, exploring educational activities/material to be shared among the Andean countries, standardizing the knowledge and creating inspirational experiences. We expect to generate many efforts in order to bring a more homogeneous activity in each Andean country, taking into account the special role of Chile in global astronomy, due to its great conditions for astronomy and the involvement of many professional observatories, universities and astronomy institutions.Our current (and upcoming) most relevant activities includes: Andean Schools on Astronomy, Andean Graduate Program and Massive Open Online Courses (TF1); Virtual Training Sessions and Teaching material for the visually impaired students; Annual TF2 meeting to gather all the collaborators (TF2); Development for planetariums and Communicating Astronomy with the Public (TF3). The Andean region, in the other hand, will also be involved in at least two important events: the CAP Meeting in May 2016 and the XV LARIM in October 2016 (both in Colombia); and Chile will bid to host the XXXI IAU GA in 2021, with the aim of show the great advances in astronomical development from the Andean region and South America.

  11. How fast is the Patagonian shelf-break acidifying?

    Science.gov (United States)

    Orselli, Iole B. M.; Kerr, Rodrigo; Ito, Rosane G.; Tavano, Virginia M.; Mendes, Carlos Rafael B.; Garcia, Carlos A. E.

    2018-02-01

    Anthropogenic carbon (Cant) concentration is determined according to the TrOCA method, from carbonate system data and hydrographic parameters collected during two consecutive spring cruises (2007 and 2008) in the Argentinean Patagonian shelf-break zone between 36°S and 50°S. Cant has intruded the water column until intermediate depths, with no Cant below 1000 m, in the deeper waters (i.e., North Atlantic Deep Water and Antarctic Bottom Water) of the Northern sector of the study area (i.e., North of 38°S). The higher Cant concentration is observed in Subantarctic Shelf Water in the Southern region, whereas in the Northern sector both Tropical Water and South Atlantic Central Water are equally affected by Cant intrusion. The Antarctic Intermediate Water represents the depth-limit achieved by Cant penetration, reinforcing the role that this water mass plays as an important vehicle to transport Cant to the oceans interior. The estimated Cant average (± method precision) is 46.6 ± 5.3 μmol kg- 1, considering the full depth of the water column. The ocean acidification state (ΔpH) shows an average (± standard deviation) of - 0.11 ± 0.05, thus, indicating an annual pH reduction of - 0.0010 yr- 1 since the Industrial Revolution (c.a. 1750). The degree of aragonite saturation is lowered towards undersaturation levels of calcite. The Patagonian shelf and shelf-break zones-a strong CO2 sink region in the global ocean-are likely a key area for Cant intrusion in the southwestern South Atlantic Ocean.

  12. Fast matrix treatment of 3-D radiative transfer in vegetation canopies: SPARTACUS-Vegetation 1.1

    Science.gov (United States)

    Hogan, Robin J.; Quaife, Tristan; Braghiere, Renato

    2018-01-01

    A fast scheme is described to compute the 3-D interaction of solar radiation with vegetation canopies. The canopy is split in the horizontal plane into one clear region and one or more vegetated regions, and the two-stream equations are used for each, but with additional terms representing lateral exchange of radiation between regions that are proportional to the area of the interface between them. The resulting coupled set of ordinary differential equations is solved using the matrix-exponential method. The scheme is compared to solar Monte Carlo calculations for idealized scenes from the RAMI4PILPS intercomparison project, for open forest canopies and shrublands both with and without snow on the ground. Agreement is good in both the visible and infrared: for the cases compared, the root-mean-squared difference in reflectance, transmittance and canopy absorptance is 0.020, 0.038 and 0.033, respectively. The technique has potential application to weather and climate modelling.

  13. Experimental manipulation of leaf litter colonization by aquatic invertebrates in a third order tropical stream.

    Science.gov (United States)

    Uieda, V S; Carvalho, E M

    2015-05-01

    Through a manipulative experiment, the colonization of leaf litter by invertebrates was investigated in two sections of a tropical stream (spatial scale) that differed in function of the canopy cover, one with the presence (closed area) and another without riparian vegetation (open area), during one month of the dry and one of the wet season (temporal scale). The work aimed to verify differences related to four variables: season, canopy cover, leaf type and leaf condition. Litter bags containing arboreal and herbaceous leaves (leaf type variable), non-conditioned and preconditioned (leaf condition variable) were placed at the bottom of the stream in each area (canopy cover variable) and season (dry and wet), and removed after 13-day colonization. The analysis of the remaining litter dry mass per leaf bag emphasizes differences related mainly to seasonality, canopy cover and leaf type, although leaf condition was also important when combined with those three factors. Comparing the abundance of invertebrates per treatment, there was a tendency of high predominance of Chironomidae during the dry season and greater taxa diversity and evenness during the wet season, when the water flow increase could alter the availability of microhabitats for local fauna. Even though canopy cover alone was not a significant source of variation in the abundance of invertebrates, the results showed a tendency of a combined effect of canopy cover with seasonality and leaf condition.

  14. Acceleration and novelty: community restoration speeds recovery and transforms species composition in Andean cloud forest.

    Science.gov (United States)

    Wilson, Sarah Jane; Rhemtulla, Jeanine M

    2016-01-01

    Community-based tropical forest restoration projects, often promoted as a win-win solution for local communities and the environment, have increased dramatically in number in the past decade. Many such projects are underway in Andean cloud forests, which, given their extremely high biodiversity and history of extensive clearing, are understudied. This study investigates the efficacy of community-based tree-planting projects to accelerate cloud forest recovery, as compared to unassisted natural regeneration. This study takes place in northwest Andean Ecuador, where the majority of the original, highly diverse cloud forests have been cleared, in five communities that initiated tree-planting projects to restore forests in 2003. In 2011, we identified tree species along transects in planted forests (n = 5), naturally regenerating forests (n = 5), and primary forests (n = 5). We also surveyed 120 households about their restoration methods, tree preferences, and forest uses. We found that tree diversity was higher in planted than in unplanted secondary forest, but both were less diverse than primary forests. Ordination analysis showed that all three forests had distinct species compositions, although planted forests shared more species with primary forests than did unplanted forests. Planted forests also contained more animal-dispersed species in both the planted canopy and in the unplanted, regenerating understory than unplanted forests, and contained the highest proportion of species with use value for local people. While restoring forest increased biodiversity and accelerated forest recovery, restored forests may also represent novel ecosystems that are distinct from the region's previous ecosystems and, given their usefulness to people, are likely to be more common in the future.

  15. Late cenozoic magmatism in the South Patagonian batholith: SHRIMP U-Pb zircon age evidence

    International Nuclear Information System (INIS)

    Fanning, C.M; Herve, F; Pankhurst, R.J; Thomson, S; Faundez, V

    2001-01-01

    The North Patagonian Batholith (NPB) has a zonal age pattern which includes a well defined belt of Miocene and Mio-Pliocene plutons in its central portion (Pankhurst et al., 1999) which are spatially, and probably genetically related to the Liquine-Ofqui Fault Zone. Previous geochronological studies in the Southern Patagonian Batholith (SPB), as summarized by Bruce et al. (1991), have yielded 9 late Cenozoic K-Ar or Ar-Ar ages out of a total of 116 age determinations. None of these young ages correspond to U-Pb determinations on zircons, and some of the young ages correspond to satellite plutons east of the SPB proper, such as the Torres del Paine intrusion. In this paper we present the first late Cenozoic SHRIMP U-Pb zircon ages in the area of the SPB. The morphology of the analysed zircon crystals is described and leads to some inferences on the methodology and on the geological interpretation of the obtained ages (au)

  16. A model-based telecoupling analysis for the Patagonian shelf: a new suggested template on how to study global seabirds-fisheries interactions for sustainability

    Science.gov (United States)

    Huettmann, F.; Raya Rey, A.

    2016-12-01

    The Southwest Atlantic Ocean, and the extended Patagonian shelf in particular, presents us with a very complex ecosystem of global relevance for food security and global peace. It is a highly productive area and it maintains a great diversity and abundance of seabird species. Fisheries have been identified as a main stressor for the marine ecosystems and as one of the main causes of seabird population declines. Using the framework of telecoupling - a sophisticated description of natural and socioeconomic interactions over large distances - here we present a fresh holistic look at the dynamic fisheries and (endangered) seabird interactions for the Patagonian shelf. While data are sparse, we employ machine learning-based predictions for a more holistic overview. We found that these waters of the Patagonian Shelf are significantly affected by many nations and outside players. We found that the input, output and spill-over of the Patagonian shelf ecosystem are distributed virtually all over the globe. In addition, we also found `losers' (=nations and their citizens that are left out entirely from this global resource and its governance). Our findings are based on best-available public trade and fish harvest analysis for this region, linked with predictive modeling (machine learning and geographic information systems GIS) to generalize for nine seabird species. We conveniently extend this analysis with a perspective from the financial sector and policy that enables the Patagonian fisheries as international investment and development projects. As increasingly recognized elsewhere, we believe that telecoupling can serve as a new but rather sophisticated study template highlighting wider complexities, bottlenecks and sensitivities for a vastly improved conservation research on oceans and global sustainability questions.

  17. Occurrence of Hirudinea species in a post urban reach of a Patagonian mountain stream

    Directory of Open Access Journals (Sweden)

    M. Laura Miserendino

    2014-09-01

    Full Text Available Temporal (May 2005 to February 2006 and habitat distribution (pools and riffles of Hirudinea species was analyzed at a post urban reach from Esquel stream (Chubut province, Patagonia, Argentina. Site was located 5.7 km downstream a Waste Treatment Plant. Mean values of nutrients: ammonia, nitrates and soluble reactive phosphate, as well water conductivity, turbidity and total suspended solids indicated physical and organic pollution. Leeches assemblage was composed by the glossiphonids: Helobdella scutifera Blanchard, 1900, H. michaelseni (Blanchard, 1900, H. simplex (Moore, 1911, Helobdella sp., H. hyalina Ringuelet, 1942, H. obscura Ringuelet, 1942 and the semiscolecid Patagoniobdella variabilis (Blanchard, 1900. From these H. hyalina and H. obscura are new records for Chubut province. Helobdella hyalina (810 ind.m-2 and H. simplex (465 ind. m-2 clearly dominated the assemblage at the reach. Only H. simplex displayed a spatial preference being significantly more abundant in pools than in riffle habitats (p<0.001. Species recruitment occurred mostly at September, December and March when juveniles were very abundant. Although several species of Helobdella were able to live in the disturbed section of the stream, only H. simplex and H. hyalina sustained large populations at the site and can be considered as tolerant to organic enrichment. This information is valuable to future studies on stream condition assessment in mountainous areas in Patagonia, and in other areas in which these species are present.

  18. Carcinogenic ptaquiloside in stream water at base flow and during storm events

    DEFF Research Database (Denmark)

    Strobel, Bjarne W.; Clauson-Kaas, Frederik; Hansen, Hans Chr. Bruun

    2017-01-01

    identified, of which the compound ptaquiloside (PTA) is the most abundant. Ptaquiloside has been shown to be highly water soluble, leachable from bracken fronds and litter, and present in the soil below bracken stands. During storm events throughfall from the bracken canopy was collected as well. Stream...... water samples were taken as grab samples, while throughfall accumulated in glass jars set out below the canopy. Field blanks and fortified lab controls were included to ensure reliability of the analysis. Ptaquiloside concentrations were determined using LC-MS/MS after a clean-up using solid phase...... extraction. Results showed that PTA levels in the stream were highly dependent on precipitation, and was rising considerably during rain events, peaking at 2.28 μg/L, before quickly (conservation...

  19. Forms of memory in Andean queros

    Directory of Open Access Journals (Sweden)

    Alfredo Cordiviola

    2017-12-01

    Full Text Available In colonial times, queros were used to drink chicha and to formalize pacts in ritual ceremonies by the indigenous Andean elites. They had been manufactured for centuries, long before the Incas dominated the region, and continued to be made after Spanish domination and compulsory evangelization had been established. During the Inca empire, the surface of the queros was covered just with incisions and geometric forms; in the viceroyalty of Peru they were covered instead with figurative images. In this work we analyze the evolution of these forms and the different ways in which these ceremonial vessels were used to evoke the Andean pasts.

  20. Stable isotope variations (δ18O and δD) in modern waters across the Andean Plateau

    Science.gov (United States)

    Bershaw, John; Saylor, Joel E.; Garzione, Carmala N.; Leier, Andrew; Sundell, Kurt E.

    2016-12-01

    Environmental parameters that influence the isotopic composition of meteoric water (δ18O and δD) are well characterized up the windward side of mountains, where orographic precipitation results in a predictable relationship between the isotopic composition of precipitation and elevation. The topographic and climatic evolution of the Andean Plateau and surrounding regions has been studied extensively by exploiting this relationship through the use of paleowater proxies. However, interpretation on the plateau itself is challenged by a poor understanding of processes that fractionate isotopes during vapor transport and rainout, and by the relative contribution of unique moisture sources. Here, we present an extensive dataset of modern surface water samples for the northern Andean Plateau and surrounding regions to elucidate patterns and causes of isotope fractionation in this continental environment. These data show a progressive increase in δ18O of stream water west of the Eastern Cordillera (∼1‰/70 km), almost identical to the rate observed across the Tibetan Plateau, attributed to a larger fraction of recycled water in precipitation and/or increased evaporative enrichment downwind. This may lead to underestimates of paleoelevation, particularly for sites deep into the rainshadow of the Eastern Cordilleran crest. That said, elevation is a primary control on the isotopic composition of surface waters across the entire Andean Plateau and its flanks when considering the most negative δ18O values, highlighting the need for sufficiently large datasets to distinguish minimally evaporated samples. There is a general increase in δ18O on the plateau from north to south, concomitant with an increase in aridity and decrease in convective moistening (amount effect). Lastly, stable isotope and seasonal precipitation patterns suggest easterlies provide the vast majority of moisture that falls as precipitation across the Andean Plateau and Western Cordillera, from Peru to

  1. Effects of Patagonian pine forestry on native breeding birds

    Directory of Open Access Journals (Sweden)

    Moises Pescador

    2014-12-01

    Full Text Available Aim of the study: The objective is to assess the influences of the tree stand age and other forestry management practices on species richness, composition, and distribution of the Patagonian pine plantation bird assemblages. Area of Study: The work was carried out in forested plots of Ponderosa pine located at the Lanín National Park (Patagonia, Argentina.Material and Methods: Birds were sampled using 25 m fixed radius point counts, at four plots varying in age, management, and forest structure. Main Results: A total of 2090 individuals belonging to 34 bird species were observed, their numbers vary significantly depending on the different modes of plantation management. The population density of the 14 most abundant bird species was compared among the four plantation plots and ten species don’t show statistically significant differences in their population density among the different forest plots. The California Quail, the White-Crested Elaenia and the Southern House Wren showed higher densities in pine plantations with lower tree densities and fewer cutting treatments. The Diuca Finch had high densities in the younger plantations not subjected to any treatment. Research highlights: Most of these bird species are opportunistic and a few are found more regularly in these non-native woods than in other native forested or afforested areas. Our data suggest that a mixed scenario based on a mosaic of plantation with patches of native deciduous forest may help maximize the bird diversity in the management of northwestern Patagonian plantation landscapes.Keywords: Bird population; diversity; exotic plantations; Patagonia; tree-age.

  2. Late cenozoic tectonic and geomorphic evolution of the Patagonian Andes between 42oS and 52oS, southern Chile assessed using fission-track thermochronology

    International Nuclear Information System (INIS)

    Thomson, S.N; Herve, F; Stockhert, B.; Brix, M.R.; Adriasola, A

    2001-01-01

    Fission-track (FT) analysis has been applied in the Patagonian Andes of southern Chile to assess the late Cenozoic geomorphic and tectonic response of the overriding plate to subduction of the Chile rise active oceanic spreading centre (Thomson et al., 2001). The timing and nature of tectonic uplift and denudation along the southern parts of the major transpression intra-arc Liquine-Ofqui fault (LOF) system have also been investigated (Thomson, 2001, submitted). Results from 130 FT ages (72 zircon and 58 apatite ages) and 39 apatite track length measurements reveal initiation of rapid cooling and denudation at ca. 30 Ma at the western margin of southern continental South America. This was followed by a ca. 200km eastward migration of the locus of maximum denudation to the position of the present day topographic divide between ca. 30 Ma and ca. 12 to 10 Ma. East of the Andean divide less than 3 km of denudation has occurred since the Late Cretaceous. Enhanced denudation is interpreted to be the result of increased tectonic uplift driven by a large increase in convergence rates at ca. 28 to 26 Ma that triggered orographically enhanced precipitation on the west-side of the Patagonian Andes allowing increased erosion by fluvial incision and mass transport processes. The eastward migration of the locus of maximum denudation can be related to either coeval eastward migration of the retro-arc deformation front, the effects of subduction erosion in the overriding plate at the Peru-Chile trench or shallowing of the angle of subduction. Away from the influence of the LOF the process of spreading centre subduction and collision itself coincides with an overall slow-down in denudation rates in the overriding plate most likely caused by a major reduction in the main tectonic force driving tectonic uplift in the upper plate to subduction. In contrast to the Andes south of ca. 46 o S, increased cooling and denudation related to transpression induced rock uplift and erosion along

  3. Identifying the environmental factors that effect within canopy BVOC loss using a multilevel canopy model

    Science.gov (United States)

    Chan, W. S.; Fuentes, J. D.; Lerdau, M.

    2010-12-01

    This presentation will provide research findings to evaluate the hypothesis that the loss of biogenic volatile organic compound (BVOC) within plant canopies is dynamic and depends on factors such as plant canopy architecture (height and leaf area distribution), atmospheric turbulence, concentration of oxidants (OH, O3, NO3), and the reactivity of BVOC species. Results will be presented from a new one dimensional, multilevel canopy model that couples algorithms for canopy microclimate, leaf physiology, BVOC emission, turbulent transport, and atmospheric chemistry to investigate the relative importance of factors that impact BVOC loss within a forest canopy. Model sensitivity tests will be presented and discussed to identify factors driving canopy loss. Results show isoprene and monoterpene canopy losses as high as 9 and 18%, respectively, for tall canopies during the daytime. We hypothesize that canopy height and wind speed (i.e. canopy residence time) may be the most important in dictating within-canopy loss. This work will reduce the error in bottom-up flux estimates of BVOCs and ultimately improve parameterizations of BVOC sources in air quality models by accounting for within canopy processes.

  4. Tracing dissolved organic matter (DOM) from land-based aquaculture systems in North Patagonian streams

    DEFF Research Database (Denmark)

    Nimptsch, Jorge; Woelfl, Stefan; Osorio, Sebastian

    2015-01-01

    Chile is the second largest producer of salmonids worldwide. The first step in the production of salmonids takes place in land-based aquacultures. However, the effects of the discharge from these aquacultures on stream dissolved organic matter (DOM) content, molecular composition and degradabilit...

  5. Andean cutaneous leishmaniasis (Andean-CL, uta) in Peru and Ecuador: the causative Leishmania parasites and clinico-epidemiological features.

    Science.gov (United States)

    Hashiguchi, Yoshihisa; Gomez, Eduardo A L; Cáceres, Abraham G; Velez, Lenin N; Villegas, Nancy V; Hashiguchi, Kazue; Mimori, Tatsuyuki; Uezato, Hiroshi; Kato, Hirotomo

    2018-01-01

    This study provides comprehensive information on the past and current status of the Andean cutaneous leishmaniasis (Andean-CL, uta) in Peru and Ecuador, mainly focusing on the causative Leishmania parasites and clinico-epidemiological features. Available information and data including our unpublished works were analyzed thoroughly. Endemic regions of the Andean-CL (uta) in Peru run from the north Piura/Cajamarca to the south Ayacucho at a wide range of the Pacific watersheds of the Andes through several departments, while in Ecuador those exist at limited and spotted areas in the country's mid-southwestern two provinces, Azuay and Chimborazo. The principal species of the genus Leishmania are completely different at subgenus level, L. (Viannia) peruviana in Peru, and L. (Leishmania) mexicana and L. (L.) major-like (infrequent occurrence) in Ecuador. The Peruvian uta is now prevalent in different age and sex groups, being not clearly defined as found in the past. The precise reasons are not known and should be elucidated further, though probable factors, such as emergence of other Leishmania parasites, non-immune peoples' migration into the areas, etc., were discussed briefly in the text. The Andean-CL cases in Ecuador are more rural than before, probably because of a rapid development of the Leishmania-positive communities and towns, and the change of life-styles of the inhabitants, including newly constructed houses and roads in the endemic areas. Such information is helpful for future management of the disease, not only for Leishmania-endemic areas in the Andes but also for other endemic areas. Copyright © 2017 Elsevier B.V. All rights reserved.

  6. Zoonotic parasites associated with felines from the Patagonian Holocene

    Directory of Open Access Journals (Sweden)

    Martín Horacio Fugassa

    2009-12-01

    Full Text Available Feline coprolites were examined for parasites with the aim of studying ancient infections that occurred in the Patagonian region during the Holocene period. Eggs compatible to Trichuris sp., Calodium sp., Eucoleus sp., Nematodirus sp., Oesophagostomum sp. (Nematoda, Monoecocestus sp. (Cestoda and Eimeria macusaniensis (Coccidia were recovered from faecal samples. The results obtained from the analysis provide evidence of consumption by felids of the viscera of both rodents and camelids. This knowledge allows for improved explanations as to the distribution of parasitism and its significance to the health of humans and animals inhabiting the area under study during the Middle Holocene.

  7. Genetic diversity and germplasm conservation of three minor Andean tuber crop species

    Directory of Open Access Journals (Sweden)

    Malice M.

    2009-01-01

    Full Text Available In traditional Andean agrosystems, three minor tuber crop species are of regional or local importance: oca (Oxalis tuberosa Molina, ulluco (Ullucus tuberosus Caldas and mashua (Tropaeolum tuberosum Ruiz and Pav.. Genetic diversity within these species is very large and could result from the high ecological and cultural variability that characterizes the Andean area. Nowadays, many anthropic or ecological factors cause the loss of diversity and contribute to genetic erosion. The development of conservation strategies for genetic resources of Andean tubers, in situ as well as ex situ, includes a better knowledge of diversity in addition to the study of Andean farming strategies linked to this genetic diversity.

  8. Volcanism and associated hazards: the Andean perspective

    Science.gov (United States)

    Tilling, R. I.

    2009-12-01

    Andean volcanism occurs within the Andean Volcanic Arc (AVA), which is the product of subduction of the Nazca Plate and Antarctica Plates beneath the South America Plate. The AVA is Earth's longest but discontinuous continental-margin volcanic arc, which consists of four distinct segments: Northern Volcanic Zone, Central Volcanic Zone, Southern Volcanic Zone, and Austral Volcanic Zone. These segments are separated by volcanically inactive gaps that are inferred to indicate regions where the dips of the subducting plates are too shallow to favor the magma generation needed to sustain volcanism. The Andes host more volcanoes that have been active during the Holocene (past 10 000 years) than any other volcanic region in the world, as well as giant caldera systems that have produced 6 of the 47 largest explosive eruptions (so-called "super eruptions") recognized worldwide that have occurred from the Ordovician to the Pleistocene. The Andean region's most powerful historical explosive eruption occurred in 1600 at Huaynaputina Volcano (Peru). The impacts of this event, whose eruptive volume exceeded 11 km3, were widespread, with distal ashfall reported at distances >1000 km away. Despite the huge size of the Huaynaputina eruption, human fatalities from hazardous processes (pyroclastic flows, ashfalls, volcanogenic earthquakes, and lahars) were comparatively small owing to the low population density at the time. In contrast, lahars generated by a much smaller eruption (Colombia) killed about 25 000 people - the worst volcanic disaster in the Andean region as well as the second worst in the world in the 20th century. The Ruiz tragedy has been attributed largely to ineffective communications of hazards information and indecisiveness by government officials, rather than any major deficiencies in scientific data. Ruiz's disastrous outcome, however, together with responses to subsequent hazardous eruptions in Chile, Colombia, Ecuador, and Peru has spurred significant

  9. VitiCanopy: A Free Computer App to Estimate Canopy Vigor and Porosity for Grapevine.

    Science.gov (United States)

    De Bei, Roberta; Fuentes, Sigfredo; Gilliham, Matthew; Tyerman, Steve; Edwards, Everard; Bianchini, Nicolò; Smith, Jason; Collins, Cassandra

    2016-04-23

    Leaf area index (LAI) and plant area index (PAI) are common and important biophysical parameters used to estimate agronomical variables such as canopy growth, light interception and water requirements of plants and trees. LAI can be either measured directly using destructive methods or indirectly using dedicated and expensive instrumentation, both of which require a high level of know-how to operate equipment, handle data and interpret results. Recently, a novel smartphone and tablet PC application, VitiCanopy, has been developed by a group of researchers from the University of Adelaide and the University of Melbourne, to estimate grapevine canopy size (LAI and PAI), canopy porosity, canopy cover and clumping index. VitiCanopy uses the front in-built camera and GPS capabilities of smartphones and tablet PCs to automatically implement image analysis algorithms on upward-looking digital images of canopies and calculates relevant canopy architecture parameters. Results from the use of VitiCanopy on grapevines correlated well with traditional methods to measure/estimate LAI and PAI. Like other indirect methods, VitiCanopy does not distinguish between leaf and non-leaf material but it was demonstrated that the non-leaf material could be extracted from the results, if needed, to increase accuracy. VitiCanopy is an accurate, user-friendly and free alternative to current techniques used by scientists and viticultural practitioners to assess the dynamics of LAI, PAI and canopy architecture in vineyards, and has the potential to be adapted for use on other plants.

  10. VitiCanopy: A Free Computer App to Estimate Canopy Vigor and Porosity for Grapevine

    Directory of Open Access Journals (Sweden)

    Roberta De Bei

    2016-04-01

    Full Text Available Leaf area index (LAI and plant area index (PAI are common and important biophysical parameters used to estimate agronomical variables such as canopy growth, light interception and water requirements of plants and trees. LAI can be either measured directly using destructive methods or indirectly using dedicated and expensive instrumentation, both of which require a high level of know-how to operate equipment, handle data and interpret results. Recently, a novel smartphone and tablet PC application, VitiCanopy, has been developed by a group of researchers from the University of Adelaide and the University of Melbourne, to estimate grapevine canopy size (LAI and PAI, canopy porosity, canopy cover and clumping index. VitiCanopy uses the front in-built camera and GPS capabilities of smartphones and tablet PCs to automatically implement image analysis algorithms on upward-looking digital images of canopies and calculates relevant canopy architecture parameters. Results from the use of VitiCanopy on grapevines correlated well with traditional methods to measure/estimate LAI and PAI. Like other indirect methods, VitiCanopy does not distinguish between leaf and non-leaf material but it was demonstrated that the non-leaf material could be extracted from the results, if needed, to increase accuracy. VitiCanopy is an accurate, user-friendly and free alternative to current techniques used by scientists and viticultural practitioners to assess the dynamics of LAI, PAI and canopy architecture in vineyards, and has the potential to be adapted for use on other plants.

  11. On the Nature of Cross-Linguistic Transfer: A Case Study of Andean Spanish

    Science.gov (United States)

    Muntendam, Antje G.

    2013-01-01

    This paper presents the results of a study on cross-linguistic transfer in Andean Spanish word order. In Andean Spanish the object appears in preverbal position more frequently than in non-Andean Spanish, which has been attributed to an influence from Quechua (a Subject-Object-Verb language). The high frequency of preverbal objects could be…

  12. Marking behavior of Andean bears in an Ecuadorian cloud forest

    NARCIS (Netherlands)

    Filipczyková, Eva; Heitkonig, Ignas; Castellanos, Armando; Hantson, Wouter; Steyaert, Sam M.J.G.

    2017-01-01

    Very little is known about marking behavior of the endangered Andean bear (Tremarctos ornatus). Here, we present a first detailed description of Andean bear marking behavior obtained using camera traps. From November 2012 to April 2013, we inspected 16 bear trails in the Napo province of eastern

  13. Streams in the urban heat island: spatial and temporal variability in temperature

    Science.gov (United States)

    Somers, Kayleigh A.; Bernhardt, Emily S.; Grace, James B.; Hassett, Brooke A.; Sudduth, Elizabeth B.; Wang, Siyi; Urban, Dean L.

    2013-01-01

    Streams draining urban heat islands tend to be hotter than rural and forested streams at baseflow because of warmer urban air and ground temperatures, paved surfaces, and decreased riparian canopy. Urban infrastructure efficiently routes runoff over hot impervious surfaces and through storm drains directly into streams and can lead to rapid, dramatic increases in temperature. Thermal regimes affect habitat quality and biogeochemical processes, and changes can be lethal if temperatures exceed upper tolerance limits of aquatic fauna. In summer 2009, we collected continuous (10-min interval) temperature data in 60 streams spanning a range of development intensity in the Piedmont of North Carolina, USA. The 5 most urbanized streams averaged 21.1°C at baseflow, compared to 19.5°C in the 5 most forested streams. Temperatures in urban streams rose as much as 4°C during a small regional storm, whereas the same storm led to extremely small to no changes in temperature in forested streams. Over a kilometer of stream length, baseflow temperature varied by as much as 10°C in an urban stream and as little as 2°C in a forested stream. We used structural equation modeling to explore how reach- and catchment-scale attributes interact to explain maximum temperatures and magnitudes of storm-flow temperature surges. The best predictive model of baseflow temperatures (R2  =  0.461) included moderately strong pathways directly (extent of development and road density) and indirectly, as mediated by reach-scale factors (canopy closure and stream width), from catchment-scale factors. The strongest influence on storm-flow temperature surges appeared to be % development in the catchment. Reach-scale factors, such as the extent of riparian forest and stream width, had little mitigating influence (R2  =  0.448). Stream temperature is an essential, but overlooked, aspect of the urban stream syndrome and is affected by reach-scale habitat variables, catchment-scale urbanization

  14. Andean waterways

    DEFF Research Database (Denmark)

    Rasmussen, Mattias Borg

    Andean Waterways explores the politics of natural resource use in the Peruvian Andes in the context of climate change and neoliberal expansion. It does so through careful ethnographic analysis of the constitution of waterways, illustrating how water becomes entangled in a variety of political......, social, and cultural concerns. Set in the highland town of Recuay in Ancash, the book traces the ways in which water affects political and ecological relations as glaciers recede. By looking at the shared waterways of four villages located in the foothills of Cordillera Blanca, it addresses pertinent...

  15. Fish diversity in adjacent ambient, thermal, and post-thermal freshwater streams

    International Nuclear Information System (INIS)

    McFarlane, R.W.

    1976-01-01

    The Savannah River Plant area is drained by five streams of various sizes and thermal histories. One has never been thermally stressed, two presently receive thermal effluent, and two formerly received thermal effluent from nuclear production reactors. Sixty-four species of fishes are known to inhabit these streams; 55 species is the highest number obtained from any one stream. Thermal effluent in small streams excludes fish during periods of high temperatures, but the streams are rapidly reinvaded when temperatures subside below lethal limits. Some cyprinids become extinct in nonthermal tributaries upstream from the thermal effluents after extended periods of thermal stress. This extinction is similar to that which follows stream impoundment. Post-thermal streams rapidly recover their fish diversity and abundance. The alteration of the streambed and removal of overhead canopy may change the stream characteristics and modify the post-thermal fish fauna

  16. Pyroclastic Eruption Boosts Organic Carbon Fluxes Into Patagonian Fjords

    Science.gov (United States)

    Mohr, Christian H.; Korup, Oliver; Ulloa, Héctor; Iroumé, Andrés.

    2017-11-01

    Fjords and old-growth forests store large amounts of organic carbon. Yet the role of episodic disturbances, particularly volcanic eruptions, in mobilizing organic carbon in fjord landscapes covered by temperate rainforests remains poorly quantified. To this end, we estimated how much wood and soils were flushed to nearby fjords following the 2008 eruption of Chaitén volcano in south-central Chile, where pyroclastic sediments covered >12 km2 of pristine temperate rainforest. Field-based surveys of forest biomass, soil organic content, and dead wood transport reveal that the reworking of pyroclastic sediments delivered 66,500 + 14,600/-14,500 tC of large wood to two rivers entering the nearby Patagonian fjords in less than a decade. A similar volume of wood remains in dead tree stands and buried beneath pyroclastic deposits ( 79,900 + 21,100/-16,900 tC) or stored in active river channels (5,900-10,600 tC). We estimate that bank erosion mobilized 132,300+21,700/-30,600 tC of floodplain forest soil. Eroded and reworked forest soils have been accreting on coastal river deltas at >5 mm yr-1 since the eruption. While much of the large wood is transported out of the fjord by long-shore drift, the finer fraction from eroded forest soils is likely to be buried in the fjords. We conclude that the organic carbon fluxes boosted by rivers adjusting to high pyroclastic sediment loads may remain elevated for up to a decade and that Patagonian temperate rainforests disturbed by excessive loads of pyroclastic debris can be episodic short-lived carbon sources.

  17. Coupling nutrient uptake and energy flow in headwater streams

    Energy Technology Data Exchange (ETDEWEB)

    Mulholland, Patrick J [ORNL; Fellows, Christine [Griffith University, Nathan, Queensland, Australia; Valett, H. Maurice [Virginia Polytechnic Institute and State University (Virginia Tech); Dahm, Cliff [University of New Mexico, Albuquerque; Thomas, Steve [University of Nebraska

    2006-08-01

    Nutrient cycling and energy flow in ecosystems are tightly linked through the metabolic processes of organisms. Greater uptake of inorganic nutrients is expected to be associated with higher rates of metabolism [gross primary production (GPP) and respiration (R)], due to assimilatory demand of both autotrophs and heterotrophs. However, relationships between uptake and metabolism should vary with the relative contribution of autochthonous and allochthonous sources of organic matter. To investigate the relationship between metabolism and nutrient uptake, we used whole-stream and benthic chamber methods to measure rates of nitrate-nitrogen (NO{sub 3}-N) uptake and metabolism in four headwater streams chosen to span a range of light availability and therefore differing rates of GPP and contributions of autochthonous carbon. We coupled whole-stream metabolism with measures of NO{sub 3}-N uptake conducted repeatedly over the same stream reach during both day and night, as well as incubating benthic sediments under both light and dark conditions. NO{sub 3}-N uptake was generally greater in daylight compared to dark conditions, and although day-night differences in whole-stream uptake were not significant, light-dark differences in benthic chambers were significant at three of the four sites. Estimates of N demand indicated that assimilation by photoautotrophs could account for the majority of NO{sub 3}-N uptake at the two sites with relatively open canopies. Contrary to expectations, photoautotrophs contributed substantially to NO{sub 3}-N uptake even at the two closed-canopy sites, which had low values of GPP/R and relied heavily on allochthonous carbon to fuel R.

  18. Fire cue effects on seed germination of six species of northwestern Patagonian grasslands

    Science.gov (United States)

    Gonzalez, S. L.; Ghermandi, L.

    2012-09-01

    Postfire recruitment of seedlings has been attributed to a stimulation of germination by fire-related cues. The germination response to heat shock (80 °C - 5 min), smoke (60 min), the combination of both factors and no heat no smoke (control) was studied in six native species (two dominant grasses, two dominant shrubs and two annual fugitive herbs) of northwestern Patagonian grasslands. Seeds of the grasses Festuca pallescens and Stipa speciosa and the shrub Senecio bracteolatus (Asteraceae) germinated when they were exposed to heat shock, whereas seeds of the other shrub, Mulinum spinosum (Apiaceae), were killed by this fire cue. In grasses, probably the glume of caryopsis protected embryos from heat. Possibly, the seed size could explain the different responses of the two shrubs. Heat combined with smoke reduced seed germination for S. speciosa and S. bracteolatus. The heat could have scarified seeds and the longer exposure to smoke could have been toxic for embryos. The same treatment increased germination of the annual fugitive herb Boopis gracilis (Calyceraceae). We concluded that fire differentially affects the seedling recruitment of the studied species in the northwestern Patagonian grasslands.

  19. Quantifying Forested Riparian Buffer Ability to Ameliorate Stream Temperature in a Missouri Ozark Border Stream of the Central U.S

    Science.gov (United States)

    Bulliner, E. A.; Hubbart, J. A.

    2009-12-01

    Riparian buffers play an important role in modulating stream water quality, including temperature. There is a need to better understand riparian form and function to validate and improve contemporary management practices. Further studies are warranted to characterize energy attenuation by forested riparian canopy layers that normally buffer stream temperature, particularly in the central hardwood forest regions of the United States where relationships between canopy density and stream temperature are unknown. To quantify these complex processes, two intensively instrumented hydroclimate stations were installed along two stream reaches of a riparian stream in central Missouri, USA in the winter of 2008. Hydroclimate stations are located along stream reaches oriented in both cardinal directions, which will allow interpolation of results to other orientations. Each station consists of an array of instrumentation that senses the flux of water and energy into and out of the riparian zone. Reference data are supplied from a nearby flux tower (US DOE) located on top of a forested ridge. The study sites are located within a University of Missouri preserved wildland area on the border of the southern Missouri’s Ozark region, an ecologically distinct region in the central United States. Limestone underlies the study area, resulting in a distinct semi-Karst hydrologic system. Vegetation forms a complex, multi-layered canopy extending from the stream edge through the riparian zone and into surrounding hills. Climate is classified as humid continental, with approximate average annual temperature and precipitation of 13.2°C and 970mm, respectively. Preliminary results (summer 2009 data) indicate incoming short-wave radiation is 24.9% higher at the N-S oriented stream reach relative to the E-W oriented reach. Maximum incoming short wave radiation during the period was 64.5% lower at the N-S reach relative to E-W reach. Average air temperature for the E-W reach was 0.3°C lower

  20. Tectonic evolution of the North Patagonian Andes (41°-44° S) through recognition of syntectonic strata

    Science.gov (United States)

    Echaurren, A.; Folguera, A.; Gianni, G.; Orts, D.; Tassara, A.; Encinas, A.; Giménez, M.; Valencia, V.

    2016-05-01

    The North Patagonian fold-thrust belt (41°-44° S) is characterized by a low topography, reduced crustal thickness and a broad lateral development determined by a broken foreland system in the retroarc zone. This particular structural system has not been fully addressed in terms of the age and mechanisms that built this orogenic segment. Here, new field and seismic evidence of syntectonic strata constrain the timing of the main deformational stages, evaluating the prevailing crustal regime for the different mountain domains through time. Growth strata and progressive unconformities, controlled by extensional or compressive structures, were recognized in volcanic and sedimentary rocks from the cordilleran to the extra-Andean domain. These data were used to construct a balanced cross section, whose deep structure was investigated through a thermomechanical model that characterizes the upper plate rheology. Our results indicate two main compressive stages, interrupted by an extensional relaxation period. The first contractional stage in the mid-Cretaceous inverted Jurassic-Lower Cretaceous half graben systems, reactivating the western Cañadón Asfalto rift border ~ 500 km away from the trench, at a time of arc foreland expansion. For this stage, available thermochronological data reveal forearc cooling episodes, and global tectonic reconstructions indicate mid-ocean ridge collisions against the western edge of an upper plate with rapid trenchward displacement. Widespread synextensional volcanism is recognized throughout the Paleogene during plate reorganization; retroarc Paleocene--Eocene flare up activity is interpreted as product of a slab rollback, and fore-to-retroarc Oligocene slab/asthenospheric derived products as an expression of enhanced extension. The second stage of mountain growth occurred in Miocene time associated with Nazca Plate subduction, reaching nearly the same amplitude than the first compressive stage. Extensional weakening of the upper plate

  1. Mohorovicic discontinuity depth analysis beneath North Patagonian Massif

    Science.gov (United States)

    Gómez Dacal, M. L.; Tocho, C.; Aragón, E.

    2013-05-01

    The North Patagonian Massif is a 100000 km2, sub-rectangular plateau that stands out 500 to 700 m higher in altitude than the surrounding topography. The creation of this plateau took place during the Oligocene through a sudden uplift without noticeable internal deformation. This quite different mechanical response between the massif and the surrounding back arc, the short time in which this process took place and a regional negative Bouguer anomaly in the massif area, raise the question about the isostatic compensation state of the previously mentioned massif. In the present work, a comparison between different results about the depth of the Mohorovicic discontinuity beneath the North Patagonian Massif and a later analysis is made. It has the objective to analyze the crustal thickness in the area to contribute in the determination of the isostatic balance and the better understanding of the Cenozoic evolution of the mentioned area. The comparison is made between four models; two of these were created with seismic information (Feng et al., 2006 and Bassin et al., 2000), another model with gravity information (Barzaghi et al., 2011) and the last one with a combination of both techniques (Tassara y Etchaurren, 2011). The latter was the result of the adaptation to the work area of a three-dimensional density model made with some additional information, mainly seismic, that constrain the surfaces. The work of restriction and adaptation of this model, the later analysis and comparison with the other three models and the combination of both seismic models to cover the lack of resolution in some areas, is presented here. According the different models, the crustal thickness of the study zone would be between 36 and 45 Km. and thicker than the surrounding areas. These results talk us about a crust thicker than normal and that could behave as a rigid and independent block. Moreover, it can be observed that there are noticeable differences between gravimetric and seismic

  2. Turbulent flows over sparse canopies

    Science.gov (United States)

    Sharma, Akshath; García-Mayoral, Ricardo

    2018-04-01

    Turbulent flows over sparse and dense canopies exerting a similar drag force on the flow are investigated using Direct Numerical Simulations. The dense canopies are modelled using a homogeneous drag force, while for the sparse canopy, the geometry of the canopy elements is represented. It is found that on using the friction velocity based on the local shear at each height, the streamwise velocity fluctuations and the Reynolds stress within the sparse canopy are similar to those from a comparable smooth-wall case. In addition, when scaled with the local friction velocity, the intensity of the off-wall peak in the streamwise vorticity for sparse canopies also recovers a value similar to a smooth-wall. This indicates that the sparse canopy does not significantly disturb the near-wall turbulence cycle, but causes its rescaling to an intensity consistent with a lower friction velocity within the canopy. In comparison, the dense canopy is found to have a higher damping effect on the turbulent fluctuations. For the case of the sparse canopy, a peak in the spectral energy density of the wall-normal velocity, and Reynolds stress is observed, which may indicate the formation of Kelvin-Helmholtz-like instabilities. It is also found that a sparse canopy is better modelled by a homogeneous drag applied on the mean flow alone, and not the turbulent fluctuations.

  3. Tracking spatial variation in river load from Andean highlands to inter-Andean valleys

    Science.gov (United States)

    Tenorio, Gustavo E.; Vanacker, Veerle; Campforts, Benjamin; Álvarez, Lenín; Zhiminaicela, Santiago; Vercruysse, Kim; Molina, Armando; Govers, Gerard

    2018-05-01

    Mountains play an important role in the denudation of continents and transfer erosion and weathering products to lowlands and oceans. The rates at which erosion and weathering processes take place in mountain regions have a substantial impact on the morphology and biogeochemistry of downstream reaches and lowlands. The controlling factors of physical erosion and chemical weathering and the coupling between the two processes are not yet fully understood. In this study, we report physical erosion and chemical weathering rates for five Andean catchments located in the southern Ecuadorian Andes and investigate their mutual interaction. During a 4-year monitoring period, we sampled river water at biweekly intervals, and we analyzed water samples for major ions and suspended solids. We derived the total annual dissolved, suspended sediment, and ionic loads from the flow frequency curves and adjusted rating curves and used the dissolved and suspended sediment yields as proxies for chemical weathering and erosion rates. In the 4-year period of monitoring, chemical weathering exceeds physical erosion in the high Andean catchments. Whereas physical erosion rates do not exceed 30 t km-2 y-1 in the relict glaciated morphology, chemical weathering rates range between 22 and 59 t km-2 y-1. The variation in chemical weathering is primarily controlled by intrinsic differences in bedrock lithology. Land use has no discernible impact on the weathering rate but leads to a small increase in base cation concentrations because of fertilizer leaching in surface water. When extending our analysis with published data on dissolved and suspended sediment yields from the northern and central Andes, we observe that the river load composition strongly changes in the downstream direction, indicating large heterogeneity of weathering processes and rates within large Andean basins.

  4. The evolution of witchcraft and the meaning of healing in colonial Andean society.

    Science.gov (United States)

    Silverblatt, I

    1983-12-01

    This paper explores the ways in which traditional beliefs of Andean peoples regarding health and sickness were transformed by the process of Spanish colonization. It also examines how the colonial context devolved new meanings and powers on native curers. The analysis of these transformations in Andean systems of meanings and role structures relating to healing depends on an examination of the European witchcraze of the 16th-17th centuries. The Spanish conquest of the Inca empire in the mid-1500's coincided with the European witch hunts; it is argued that the latter formed the cultural lens through which the Spanish evaluated native religion--the matrix through which Andean concepts of disease and health were expressed--as well as native curers. Andean religion was condemned as heresy and curers were condemned as witches. Traditional Andean cosmology was antithetical to 16th century European beliefs in the struggle between god and the devil, between loyal Christians and the Satan's followers. Consequently, European concepts of disease and health based on the power of witches, Satan's adherents, to cause harm and cure were alien to pre-Columbian Andean thought. Ironically European concepts of Satan and the supposed powers of witches began to graft themselves onto the world view of Andean peoples. The ensuing dialectic of ideas as well as the creation of new healers/witches forged during the imposition of colonial rule form the crux of this analysis.

  5. Contaminants as habitat disturbers: PAH-driven drift by Andean paramo stream insects.

    Science.gov (United States)

    Araújo, Cristiano V M; Moreira-Santos, Matilde; Sousa, José P; Ochoa-Herrera, Valeria; Encalada, Andrea C; Ribeiro, Rui

    2014-10-01

    Contaminants can behave as toxicants, when toxic effects are observed in organisms, as well as habitat disturbers and fragmentors, by triggering avoidance responses and generating less- or uninhabited zones. Drift by stream insects has long been considered a mechanism to avoid contamination by moving to most favorable habitats. Given that exploration and transportation of crude oil represent a threat for surrounding ecosystems, the key goal of the present study was to assess the ability of autochthonous groups of aquatic insects from the Ecuadorian paramo streams to avoid by drift different concentrations of polycyclic aromatic hydrocarbons (PAH) contained in the soluble fraction of locally transported crude oil. In the laboratory, different groups of insects were exposed to PAH for 12h. Three different assays, which varied in taxa and origin of the organisms, concentrations of PAH (0.6-38.8µgL(-1)), and environment settings (different levels of refuge and flow) were performed. For Anomalocosmoecus palugillensis (Limnephilidae), drift was a major cause of population decline in low concentration treatments but at higher concentrations mortality dominated. PAH was highly lethal, even at lower concentrations, for Chironomidae, Grypopterygidae (Claudioperla sp.) and Hydrobiosidae (Atopsyche sp.), and, therefore, no conclusion about drift can be drawn for these insects. Contamination by PAH showed to be a threat for benthic aquatic insects from Ecuadorian paramo streams as it can cause a population decline due to avoidance by drift and mortality. Copyright © 2014 Elsevier Inc. All rights reserved.

  6. Endogenous and exogenous control of ecosystem function: N cycling in headwater streams

    Energy Technology Data Exchange (ETDEWEB)

    Mulholland, Patrick J [ORNL; Valett, H. Maurice [Virginia Polytechnic Institute and State University (Virginia Tech); Thomas, Steve [University of Nebraska; Webster, Jackson [Virginia Polytechnic Institute and State University (Virginia Tech); Dahm, Cliff [University of New Mexico, Albuquerque; Fellows, Christine [Griffith University, Nathan, Queensland, Australia; Crenshaw, Chelsea [University of New Mexico, Albuquerque; Peterson, Chris G. [Loyola University

    2008-01-01

    Allochthonous inputs act as resource subsidies to many ecosystems, where they exert strong influences on metabolism and material cycling. At the same time, metabolic theory proposes endogenous thermal control independent of resource supply. To address the relative importance of exogenous and endogenous influences, we quantified spatial and temporal variation in ecosystem metabolism and nitrogen (N) uptake using seasonal releases of {sup 15}N as nitrate in six streams differing in riparian-stream interaction and metabolic character. Nitrate removal was quantified using a nutrient spiraling approach based on measurements of downstream decline in {sup 15}N flux. Respiration (R) and gross primary production (GPP) were measured with whole-stream diel oxygen budgets. Uptake and metabolism metrics were addressed as z scores relative to site means to assess temporal variation. In open-canopied streams, areal uptake (U; {micro}g N {center_dot} m{sup -2} {center_dot} s{sup -1}) was closely related to GPP, metabolic rates increased with temperature, and R was accurately predicted by metabolic scaling relationships. In forested streams, N spiraling was not related to GPP; instead, uptake velocity (v{sub f}; mm/s) was closely related to R. In contrast to open-canopied streams, N uptake and metabolic activity were negatively correlated to temperature and poorly described by scaling laws. We contend that streams differ along a gradient of exogenous and endogenous control that relates to the relative influences of resource subsidies and in-stream energetics as determinants of seasonal patterns of metabolism and N cycling. Our research suggests that temporal variation in the propagation of ecological influence between adjacent systems generates phases when ecosystems are alternatively characterized as endogenously and exogenously controlled.

  7. Endogenous and exogenous control of ecosystem function: N cycling in headwater streams.

    Science.gov (United States)

    Valett, H M; Thomas, S A; Mulholland, P J; Webster, J R; Dahm, C N; Fellows, C S; Crenshaw, C L; Peterson, C G

    2008-12-01

    Allochthonous inputs act as resource subsidies to many ecosystems, where they exert strong influences on metabolism and material cycling. At the same time, metabolic theory proposes endogenous thermal control independent of resource supply. To address the relative importance of exogenous and endogenous influences, we quantified spatial and temporal variation in ecosystem metabolism and nitrogen (N) uptake using seasonal releases of 15N as nitrate in six streams differing in riparian-stream interaction and metabolic character. Nitrate removal was quantified using a nutrient spiraling approach based on measurements of downstream decline in 15N flux. Respiration (R) and gross primary production (GPP) were measured with whole-stream diel oxygen budgets. Uptake and metabolism metrics were addressed as z scores relative to site means to assess temporal variation. In open-canopied streams, areal uptake (U; microg N x m(-2) x s(-1)) was closely related to GPP, metabolic rates increased with temperature, and R was accurately predicted by metabolic scaling relationships. In forested streams, N spiraling was not related to GPP; instead, uptake velocity (v(f); mm/s) was closely related to R. In contrast to open-canopied streams, N uptake and metabolic activity were negatively correlated to temperature and poorly described by scaling laws. We contend that streams differ along a gradient of exogenous and endogenous control that relates to the relative influences of resource subsidies and in-stream energetics as determinants of seasonal patterns of metabolism and N cycling. Our research suggests that temporal variation in the propagation of ecological influence between adjacent systems generates phases when ecosystems are alternatively characterized as endogenously and exogenously controlled.

  8. Modelling spatial distribution of Patagonian toothfish through life-stages and sex and its implications for the fishery on the Kerguelen Plateau

    Science.gov (United States)

    Péron, Clara; Welsford, Dirk C.; Ziegler, Philippe; Lamb, Timothy D.; Gasco, Nicolas; Chazeau, Charlotte; Sinègre, Romain; Duhamel, Guy

    2016-02-01

    Size and sex specific habitat preferences are common in animal populations and can have important implications for sound spatial management of harvested species. Patagonian toothfish (Dissostichus eleginoides) is a commercially exploited fish species characterised by its longevity (>50 yo) and its extremely broad distribution in depths ranging from 10 m to 2500 m on most of the Plateaux, banks and seamounts of the Southern Ocean. As many bentho-pelagic fish species, Patagonian toothfish exhibits sexual dimorphism and ontogenetic habitat shift towards deeper waters as they grow. In this study, we modelled the spatial structure of Patagonian toothfish population (median total length and sex composition) in a data-rich area, the Kerguelen Plateau (Southern Indian Ocean), to better understand the ecological drivers of their distributional patterns and inform current and future fishery management strategies. We applied spatially-explicit statistical models to quantify and predict the effects of the complex topography of the Kerguelen Plateau in structuring the spatial distribution of Patagonian toothfish total length and sex ratio, while controlling for gear selectivity and season. Model predictions showed that juvenile toothfish live in shallow regions (shelf and banks) and move downward progressively up to 600 m while they grow. Between 600 m and 1200 m, the downward movement stops and fish settle at their preferred depths. While in this depth range, fish are ∼75 cm long and most vulnerable to fisheries. As they approach maturity large fish move downward to deep-sea habitats (from 1200 m to >2300 m) and head towards the spawning grounds on the western side of the plateau and around Skiff Bank. Importantly, the sex ratio was not evenly distributed across the Plateau; prediction maps revealed a higher proportion of females in the South whereas a strong male-bias sex ratio (70%) occurred in the North-West. Large-scale prediction maps derived from our models assisted in

  9. Bee pollen as non-wood forest product in the eastern Andean highlands of Colombia

    Directory of Open Access Journals (Sweden)

    Fermín José Chamorro García

    2013-07-01

    Full Text Available The Andean forests of the Eastern Andean high-lands of Colombia have a high conservation priority given the vulnerable condition of species such as Quercus humboldtii (Fagaceae that inhabit these ecosystems. Beekeeping is regarded as an alternative activity that could play a role in the conservation of Andean forests, but little is known about how the floras of these ecosystems contribute to honey and bee pollen production. We analyzed the contribution of Andean forests to bee pollen production, given the productive potential and commercial importance of this product. Pollen analyses were performed on 25 samples from apiaries near Andean forests located in the states of Cundinamarca, Boyacá and Santander. We found that Q. humboldtii is an important source of pollen with high potential for monofloral bee pollen production. In addition, bees collect pollen from other Andean forests species such as Weinmannia tomentosa, Viburnum spp. and Morella spp. Utilization of bee pollen could lead to incentives to carry out forest conservation practices through beekeeping management.

  10. Soil water availability and rooting depth as determinants of hydraulic architecture of Patagonian woody species

    Science.gov (United States)

    Sandra J. Bucci; Fabian G. Scholz; Guillermo Goldstein; Frederick C. Meinzer; Maria E. Arce

    2009-01-01

    We studied the water economy of nine woody species differing in rooting depth in a Patagonian shrub steppe from southern Argentina to understand how soil water availability and rooting depth determine their hydraulic architecture. Soil water content and potentials, leaf water potentials (Leaf) hydraulic conductivity, wood density (Pw), rooting depth, and specific leaf...

  11. Andean waterways

    DEFF Research Database (Denmark)

    Rasmussen, Mattias Borg

    , social, and cultural concerns. Set in the highland town of Recuay in Ancash, the book traces the ways in which water affects political and ecological relations as glaciers recede. By looking at the shared waterways of four villages located in the foothills of Cordillera Blanca, it addresses pertinent......Andean Waterways explores the politics of natural resource use in the Peruvian Andes in the context of climate change and neoliberal expansion. It does so through careful ethnographic analysis of the constitution of waterways, illustrating how water becomes entangled in a variety of political...... questions concerning water governance and rural lives....

  12. Occurrence of arbuscular mycorrhizal fungi in high altitude sites of the Patagonian Altoandina region in Nahuel Huapi National Park (Argentina

    Directory of Open Access Journals (Sweden)

    María Silvana Velázquez

    Full Text Available ABSTRACT Knowledge of the occurrence and diversity of arbuscular mycorrhizal fungi (AMF in National Parks is essential for the establishment of policies for conservation. The aim of this study was to characterize the AMF communities in the Patagonian Altoandina region in Nahuel Huapi National Park, Argentina. We surveyed AMF spores associated with the rhizospheres of 9 plant species in the Patagonian Steppe (PS, Challhuaco Hill (ChH, Catedral Hill (CH, and Tronador Hill (TH regions and detected a total of 27 Glomeromycota species. Acaulospora laevis was dominant at all sites. The AMF community was dominated by Acaulosporaceae, as regards the number of species and contribution of each one to the total number of spores. Three Glomeromycota families were detected at PS, the site with the lowest elevation; whereas five to six families were detected at ChH, CH, and TH. Cluster analysis indicated that the AMF communities were grouped according to habitat. We concluded that certain patterns of the AMFcommunity structure detected were equivalent to those of high-altitude environments from other studies, while others were unique to the Patagonian region; thus suggesting that historical influences like dispersion and speciation played a critical role in shaping AMF community composition in such high-altitude environments.

  13. Testing a ground-based canopy model using the wind river canopy crane

    Science.gov (United States)

    Robert Van Pelt; Malcolm P. North

    1999-01-01

    A ground-based canopy model that estimates the volume of occupied space in forest canopies was tested using the Wind River Canopy Crane. A total of 126 trees in a 0.25 ha area were measured from the ground and directly from a gondola suspended from the crane. The trees were located in a low elevation, old-growth forest in the southern Washington Cascades. The ground-...

  14. Links between Patagonian Ice Sheet fluctuations and Antarctic dust variability during the last glacial period (MIS 4-2)

    Science.gov (United States)

    Kaiser, Jérôme; Lamy, Frank

    2010-06-01

    Antarctic and Greenland ice-core records reveal large fluctuations of dust input on both orbital and millennial time-scales with potential global climate implications. At least during glacial periods, the Antarctic dust fluctuations appear to be largely controlled by environmental changes in southern South America. We compare dust flux records from two Antarctic ice-cores to variations in the composition of the terrigenous supply at ODP Site 1233 located off southern Chile and known to record fluctuations in the extent of the northern part of the Patagonian ice-sheet (NPIS) during the last glacial period (Marine Isotope Stage, MIS, 4 to 2). Within age uncertainties, millennial-scale glacial advances (retreats) of the NPIS correlate to Antarctic dust maxima (minima). In turn, NPIS fluctuations were closely related to offshore sea surface temperature (SST) changes. This pattern suggests a causal link involving changes in temperature, in rock flour availability, in latitudinal extensions of the westerly winds and in foehn winds in the southern Pampas and Patagonia. We further suggest that the long-term trend of dust accumulation is partly linked to the sea-level related changes in the size if the Patagonian source area due to the particular morphology of the Argentine shelf. We suggest that sea-level drops at the beginning of MIS 4 and MIS 2 were important for long-term dust increases, while changes in the Patagonian dust source regions primarily control the early dust decrease during the MIS 4/3 transition and Termination 1.

  15. Understanding the Transport of Patagonian Dust and Its Influence on Marine Biological Activity in the South Atlantic Ocean

    Science.gov (United States)

    Johnson, Matthew; Meskhidze, Nicholas; Kiliyanpilakkil, Praju; Gasso, Santiago

    2010-01-01

    Modeling and remote sensing techniques were applied to examine the horizontal and vertical transport pathways of Patagonian dust and quantify the effect of soluble-iron- laden mineral dust deposition on marine primary productivity in the South Atlantic Ocean (SAO) surface waters. The global chemistry transport model GEOS-Chem, implemented with an iron dissolution scheme, was applied to evaluate the atmospheric transport and deposition of mineral dust and bioavailable iron during two dust outbreaks originating in the source regions of Patagonia. In addition to this "rapidly released" iron, offline calculations were also carried out to estimate the amount of bioavailable iron leached during the residence time of dust in the ocean mixed layer. Model simulations showed that the horizontal and vertical transport pathways of Patagonian dust plumes were largely influenced by the synoptic meteorological patterns of high and low pressure systems. Model-predicted horizontal and vertical transport pathways of Patagonian dust over the SAO were in reasonable agreement with remotely-sensed data. Comparison between remotely-sensed and offline calculated ocean surface chlorophyll-a concentrations indicated that, for the two dust outbreaks examined in this study, the deposition of bioavailable iron in the SAO through atmospheric pathways was insignificant. As the two dust transport episodes examined here represent typical outflows of mineral dust from South American sources, our study suggests that the atmospheric deposition of mineral dust is unlikely to induce large scale marine primary productivity and carbon sequestration in the South Atlantic sector of the Southern Ocean.

  16. Revision of fleas of the genus Plocopsylla belonging to the 'angusticeps-lewisi' complex in the Andean biogeographic region, with the description of a new species.

    Science.gov (United States)

    Sanchez, J; Beaucournu, J-C; Lareschi, M

    2015-06-01

    In Argentina, the Andean biogeographic region accommodates the most diverse population of fleas in the country. The Craneopsyllinae (Siphonaptera: Stephanocircidae) represent one of the most commonly found subfamilies in this region and show some endemism and high diversity. Plocopsylla is the most diverse genus of Craneopsyllinae; it includes 10 species mainly distributed in the Patagonian subregion, which parasitize sigmodontine rodents (Rodentia: Cricetidae). We describe and illustrate the morphology of the aedeagus in species of Plocopsylla that belong to the 'angusticeps-lewisi' complex. This character is of diagnostic value in differentiating among species. A new species of this complex, Plocopsylla (Plocopsylla) linardii sp. n., is described and identified by the shape and chaetotaxy of the distal arm of sternite IX, as well as by the shape of the median dorsal lobe of the aedeagus. New host associations for this complex and range extensions for most of its species are reported. Plocopsylla (P.) silewi is recorded for the first time in Argentina. The southern limits of the distributions of Plocopsylla (P.) lewisi and Plocopsylla (P.) wilesi are extended to Santa Cruz Province. The angusticeps-lewisi complex is found for the first time in San Juan Province. The information may be useful in epidemiological studies of flea-borne diseases. © 2015 The Royal Entomological Society.

  17. Drag forces of common plant species in temperate streams: consequences of morphology, velocity and biomass

    DEFF Research Database (Denmark)

    Jensen, Kaj Sand

    2008-01-01

    Swift flow in streams may physically influence the morphology and distribution of plants. I quantified drag as a function of velocity, biomass and their interaction on the trailing canopy of seven European stream species in an experimental flume and evaluated its importance for species distributi...... than an uneven distribution with the same biomass confined to dense patches surrounded by open flow channels. Thus, management strategies to ensure a patchy plants distribution should be suitable for combining agricultural drainage and ecological stream quality....

  18. K-Ar ages of rocks from Lago Alumine, Rucachoroi and Quillen, North Patagonian Andes, Neuquen, Republica Argentina

    International Nuclear Information System (INIS)

    Latorre, Carlos O.; Vattuone, M.E; Linares, Enrique; Leal, Pablo R

    2001-01-01

    This study presents new K-Ar ages of granitic rocks from the Patagonian Batholit in the North Patagonian Andes (38 o 00'- 39 o 30' SL), from localities near Alumine lake and from Norquinco lake to Quillen valley, in the Neuquen Province, Argentine. The granitic rocks of Patagonia had been recognized as Upper Paleozoic to Middle Jurassic batholits and as Late Jurassic to Tertiary batholiths (Rapela and Pankhurst, 1992). Geochronologically, Rapela and Kay (1988) had distinguished Early Cretaceous (140 to 120 Ma) and Late Cretaceous (110 to 75 Ma ) magmatic episodes based in potassium-argon data. For the granitic rocks of the area of Paso Icalma, Moquehue and the Rahue granodiorites, Cingolani et al. (1991) presented Rb-Sr whole rock isochron ages of 70±10 Ma, 209±13 Ma and 237±37 Ma, respectively, and Varela et al. (1994), with the same method, cited an age of 285±5 Ma for the Rahue granodiorites and diorites (au)

  19. Stochastic radiative transfer model for mixture of discontinuous vegetation canopies

    International Nuclear Information System (INIS)

    Shabanov, Nikolay V.; Huang, D.; Knjazikhin, Y.; Dickinson, R.E.; Myneni, Ranga B.

    2007-01-01

    Modeling of the radiation regime of a mixture of vegetation species is a fundamental problem of the Earth's land remote sensing and climate applications. The major existing approaches, including the linear mixture model and the turbid medium (TM) mixture radiative transfer model, provide only an approximate solution to this problem. In this study, we developed the stochastic mixture radiative transfer (SMRT) model, a mathematically exact tool to evaluate radiation regime in a natural canopy with spatially varying optical properties, that is, canopy, which exhibits a structured mixture of vegetation species and gaps. The model solves for the radiation quantities, direct input to the remote sensing/climate applications: mean radiation fluxes over whole mixture and over individual species. The canopy structure is parameterized in the SMRT model in terms of two stochastic moments: the probability of finding species and the conditional pair-correlation of species. The second moment is responsible for the 3D radiation effects, namely, radiation streaming through gaps without interaction with vegetation and variation of the radiation fluxes between different species. We performed analytical and numerical analysis of the radiation effects, simulated with the SMRT model for the three cases of canopy structure: (a) non-ordered mixture of species and gaps (TM); (b) ordered mixture of species without gaps; and (c) ordered mixture of species with gaps. The analysis indicates that the variation of radiation fluxes between different species is proportional to the variation of species optical properties (leaf albedo, density of foliage, etc.) Gaps introduce significant disturbance to the radiation regime in the canopy as their optical properties constitute major contrast to those of any vegetation species. The SMRT model resolves deficiencies of the major existing mixture models: ignorance of species radiation coupling via multiple scattering of photons (the linear mixture model

  20. The impact of modifying antenna size of photosystem II on canopy photosynthetic efficiency – development of a new canopy photosynthesis model scaling from metabolism to canopy level processes

    Science.gov (United States)

    Canopy photosynthesis describes photosynthesis of an entire crop field and positively correlates with biomass production. Much effort in crop breeding has focused on improving canopy architecture and hence light distribution inside the canopy. Here, we develop a new integrated canopy photosynthesis ...

  1. Persistent effects of wildfire and debris flows on the invertebrate prey base of rainbow trout in Idaho streams

    Science.gov (United States)

    Rosenberger, A.E.; Dunham, J.B.; Buffington, J.M.; Wipfli, M.S.

    2011-01-01

    Wildfire and debris flows are important physical and ecological drivers in headwater streams of western North America. Past research has primarily examined short-term effects of these disturbances; less is known about longer-term impacts. We investigated wildfire effects on the invertebrate prey base for drift-feeding rainbow trout (Oncorhynchus mykiss, Walbaum) in Idaho headwater streams a decade after wildfire. Three stream types with different disturbance histories were examined: 1) unburned, 2) burned, and 3) burned followed by debris flows that reset channel morphology and riparian vegetation. The quantity of macroinvertebrate drift (biomass density) was more variable within than among disturbance categories. Average body weight and taxonomic richness of drift were significantly related to water temperature and influenced by disturbance history. During the autumn sampling period, the amount of terrestrial insects in rainbow trout diets varied with disturbance history and the amount of overhead canopy along the stream banks. Results indicate that there are detectable changes to macroinvertebrate drift and trout diet a decade after wildfire, and that these responses are better correlated with specific characteristics of the stream (water temperature, canopy cover) than with broad disturbance classes.

  2. Impact of glaciations on the long-term erosion in Southern Patagonian Andes

    Science.gov (United States)

    Simon-Labric, Thibaud; Herman, Frederic; Baumgartner, Lukas; Shuster, David L.; Braun, Jean; Reiners, Pete W.; Valla, Pierre G.; Leuthold, Julien

    2014-05-01

    The Southern Patagonian Andes are an ideal setting to study the impact of Late-Cenozoic climate cooling and onset of glaciations impact on the erosional history of mountain belts. The lack of tectonic activity during the last ~12 Myr makes the denudation history mainly controlled by surface processes, not by tectonics. Moreover, the glaciations history of Patagonia shows the best-preserved records within the southern hemisphere (with the exception of Antarctica). Indeed, the dry climate on the leeward side of Patagonia and the presence of lava flows interbedded with glacial deposits has allowed an exceptional preservation of late Cenozoic moraines with precise dating using K-Ar analyses on lava flow. The chronology of moraines reveals a long history covering all the Quaternary, Pliocene, and up to the Upper Miocene. The early growth of large glaciers flowing on eastern foothills started at ~7-6 Myr, while the maximum ice-sheet extent dates from approximately 1.1 Myr. In order to quantify the erosion history of the Southern Patagonian Andes and compare it to the glaciations sediment record, we collected samples along an age-elevation profile for low-temperature thermochronology in the eastern side of the mountain belt (Torres del Paine massif). The (U-Th)/He age-elevation relationship shows a clear convex shape providing an apparent long-term exhumation rate of ~0.2 km/Myr followed by an exhumation rate increase at ~6 Myr. Preliminary results of 4He/3He thermochronometry for a subset of samples complete the erosion history for the Plio-Pleistocene epoch. We used inverse procedure predicting 4He distributions within an apatite grain using a radiation-damage and annealing model to quantify He-diffusion kinetics in apatite. The model also allows quantifying the impact of potential U-Th zonation throughout each apatite crystal. Inversion results reveal a denudation history composed by a pulse of denudation at ~6 Ma, as suggested by the age-elevation relationship

  3. Complex brittle deformation pattern along the Southern Patagonian Andes (Argentina)

    Science.gov (United States)

    Barberón, Vanesa; Sue, Christian; Ronda, Gonzalo; Ghiglione, Matías

    2016-04-01

    The Southern Patagonian Andes is located in the southern extreme of the Pacific subduction zone, where the Antartic oceanic plate sinks underneath South America. The history of the area begins with compression during Paleozoic, Jurassic extension associated to the rift and opening of the South Atlantic Ocean, then a sag stage in the Lower Cretaceous followed by a foreland phase as a result of plate tectonics (Ghiglione et al., 2016). The kinematic study is concentrated in the Argentinean foothills, between 46°40' and 48° SL. We measured around 800 fault planes and their striaes with the sense of movement in order to characterize the stress field. The software used to make the stress inversion were Tensor (Delvaux, 2011) and Multiple Inverse Method MIM (Yamaji et al., 2011). The stress field map was built with the results of the MIM. We present new data from 48 sites located in the northern sector of the Southern Patagonian Andes. The measurements were made in several rocks from Paleozoic to Lower Cretaceous, even though most were taken in pyroclastic jurassic rocks from El Quemado Complex. Paleostress tensors obtained are mostly strike-slip, although a 25% is normal and there are a few compresional. The pattern of faults found is complex. In some sites the tensor can be locally linked to satellite images and observations from the field or be related to a major thrust front. There is no clear correlation between the age and/or lithology with the tensor since the youngest rocks measured are Lower Cretaceous. Probably there are several generations of family faults connected to different and recent tectonic phases then the paleostress tensors might correspond to the latest tectonic events.

  4. Coupled soil-leaf-canopy and atmosphere radiative transfer modeling to simulate hyperspectral multi-angular surface reflectance and TOA radiance data

    NARCIS (Netherlands)

    Verhoef, W.; Bach, H.

    2007-01-01

    Coupling radiative transfer models for the soil background and vegetation canopy layers is facilitated by means of the four-stream flux interaction concept and use of the adding method. Also the coupling to a state-of-the-art atmospheric radiative transfer model like MODTRAN4 can be established in

  5. ASSESSING THE CANOPY INTEGRITY USING CANOPY DIGITAL IMAGES IN SEMIDECIDUOUS FOREST FRAGMENT IN SÃO CARLOS - SP- BRAZIL1

    Directory of Open Access Journals (Sweden)

    Thiago Yamada

    2017-11-01

    Full Text Available ABSTRACT It is well-known that conducting experimental research aiming the characterization of canopy structure of forests can be a difficult and costly task and, generally, requires an expert to extract, in loco, relevant information. Aiming at easing studies related to canopy structures, several techniques have been proposed in the literature and, among them, various are based on canopy digital image analysis. The research work described in this paper empirically compares two techniques that measure the integrity of the canopy structure of a forest fragment; one of them is based on central parts of canopy cover images and, the other, on canopy closure images. For the experiments, 22 central parts of canopy cover images and 22 canopy closure images were used. The images were captured along two transects: T1 (located in the conserved area and T2 (located in the naturally disturbance area. The canopy digital images were computationally processed and analyzed using the MATLAB platform for the canopy cover images and the Gap Light Analyzer (GLA, for the canopy closure images. The results obtained using these two techniques showed that canopy cover images and, among the employed algorithms, the Jseg, characterize the canopy integrity best. It is worth mentioning that part of the analysis can be automatically conducted, as a quick and precise process, with low material costs involved.

  6. Canopy Dynamics in Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.

    2010-07-27

    Nanoscale ionic materials (NIMS) are organic - inorganic hybrids in which a core nanostructure is functionalized with a covalently attached corona and an ionically tethered organic canopy. NIMS are engineered to be liquids under ambient conditions in the absence of solvent and are of interest for a variety of applications. We have used nuclear magnetic resonance (NMR) relaxation and pulse-field gradient (PFG) diffusion experiments to measure the canopy dynamics of NIMS prepared from 18-nm silica cores modified by an alkylsilane monolayer possessing terminal sulfonic acid functionality, paired with an amine-terminated ethylene oxide/propylene oxide block copolymer canopy. Carbon NMR studies show that the block copolymer canopy is mobile both in the bulk and in the NIMS and that the fast (ns) dynamics are insensitive to the presence of the silica nanoparticles. Canopy diffusion in the NIMS is slowed relative to the neat canopy, but not to the degree predicted from the diffusion of hard-sphere particles. Canopy diffusion is not restricted to the surface of the nanoparticles and shows unexpected behavior upon addition of excess canopy. Taken together, these data indicate that the liquid-like behavior in NIMS is due to rapid exchange of the block copolymer canopy between the ionically modified nanoparticles. © 2010 American Chemical Society.

  7. Canopy Dynamics in Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.; Mirau, Peter A.; Meerwall, Ernst von; Vaia, Richard A.; Rodriguez, Robert; Giannelis, Emmanuel P.

    2010-01-01

    Nanoscale ionic materials (NIMS) are organic - inorganic hybrids in which a core nanostructure is functionalized with a covalently attached corona and an ionically tethered organic canopy. NIMS are engineered to be liquids under ambient conditions in the absence of solvent and are of interest for a variety of applications. We have used nuclear magnetic resonance (NMR) relaxation and pulse-field gradient (PFG) diffusion experiments to measure the canopy dynamics of NIMS prepared from 18-nm silica cores modified by an alkylsilane monolayer possessing terminal sulfonic acid functionality, paired with an amine-terminated ethylene oxide/propylene oxide block copolymer canopy. Carbon NMR studies show that the block copolymer canopy is mobile both in the bulk and in the NIMS and that the fast (ns) dynamics are insensitive to the presence of the silica nanoparticles. Canopy diffusion in the NIMS is slowed relative to the neat canopy, but not to the degree predicted from the diffusion of hard-sphere particles. Canopy diffusion is not restricted to the surface of the nanoparticles and shows unexpected behavior upon addition of excess canopy. Taken together, these data indicate that the liquid-like behavior in NIMS is due to rapid exchange of the block copolymer canopy between the ionically modified nanoparticles. © 2010 American Chemical Society.

  8. Microclimate, canopy structure and photosynthesis in canopies of three contrasting temperate forage grasses. III. Canopy photosynthesis, individual leaf photosynthesis and the distribution of current assimilate

    Energy Technology Data Exchange (ETDEWEB)

    Sheehy, J E

    1977-01-01

    The rates of canopy and individual leaf photosynthesis and /sup 14/C distribution for three temperate forage grasses Lolium perenne cv. S24, L. perenne cv. Reveille and Festuca arundinacea cv. S170 were determined in the field during a summer growth period. Canopy photosynthesis declined as the growth period progressed, reflecting a decline in the photosynthetic capacity of successive youngest fully expanded leaves. The decline in the maximum photosynthetic capacity of the canopies was correlated with a decline in their quantum efficiencies at low irradiance. Changes in canopy structure resulted in changes in canopy net photosynthesis and dark respiration. No clear relationships between changes in the environment and changes in canopy net photosynthesis and dark respiration were established. The relative distributions of /sup 14/C in the shoots of the varieties gave a good indication of the amount of dry matter per ground area in the varieties. 21 references, 4 figures, 1 table.

  9. Marcos Zapata's "Last Supper": a feast of European religion and Andean culture.

    Science.gov (United States)

    Zendt, Christina

    2010-01-01

    In Marcos Zapata's 1753 painting of the Last Supper in Cuzco, Peru, Christian symbolism is filtered through Andean cultural tradition. Zapata was a late member of the Cuzco School of Painting, a group comprised of few European immigrants and handfuls of mestizo and Indian artists. The painters in Cuzco learned mostly from prints of European paintings, and their style tends to blend local culture into the traditional painting of their conquistadors. Imagery was the most successful tool used by the Spaniards in their quest to Christianize the Andean population. By teaching locals to paint Christian subjects, they were able to infuse Christianity into Andean traditions. Zapata's rendering of the Last Supper utilizes this cultural blending while staying true to the Christian symbolism within the subject. Instead of the traditional lamb, Zapata's Last Supper features a platter of cuy, or guinea pig, an Andean delicacy stocked with protein as well as cultural significance. Cuy was traditionally a sacrificial animal at Inca agricultural festivals and in this way it offers poignant parallel to the lamb, as a traditional Christian sacrificial animal.

  10. Market access and community size influence pastoral management of native and exotic livestock species : a case study in communities of the Cordillera Real in Bolivia's high Andean wetlands

    OpenAIRE

    Struelens, Quentin; Pomar, K. G.; Herrera, S. L.; Huanca, G. N.; Dangles, Olivier; Rebaudo, François

    2017-01-01

    Grazing areas management is of utmost importance in the Andean region. In the valleys of the Bolivian Cordillera Real near La Paz, pastoralism constitutes the traditional way for people to insure food security and economical sustainability. In these harsh mountains, unique and productive wetlands sustained by glacial water streams are of utmost importance for feeding cattle herds during the dry season. After the colonization by the Spanish, a shift in livestock species has been observed, with...

  11. Nutrient and chlorophyll relations in selected streams of the New England Coastal Basins in Massachusetts and New Hampshire, June-September 2001

    Science.gov (United States)

    Riskin, Melissa L.; Deacon, J.R.; Liebman, M.L.; Robinson, K.W.

    2003-01-01

    The U.S. Environmental Protection Agency is developing guidance to assist states with defining nutrient criteria for rivers and streams and to better describe nutrient-algal relations. As part of this effort, 13 wadeable stream sites were selected, primarily in eastern Massachusetts, for a nutrient-assessment study during the summer of 2001. The sites represent a range of water-quality impairment conditions (reference, moderately impaired, impaired) based on state regulatory agency assessments and previously assessed nitrogen, phosphorus, and dissolved-oxygen data. In addition, a combination of open- and closed-canopy locations were sampled at six of the sites to investigate the effect of sunlight on algal growth. Samples for nutrients and for chlorophyll I from phytoplankton and periphyton were collected at all stream sites. Total nitrogen (dissolved nitrite + nitrate + total ammonia + organic nitrogen) and total phosphorus (phosphorus in an unfiltered water sample) concentrations were lowest at reference sites and highest at impaired sites. There were statistically significant differences (p phytoplankton were not significantly different among site impairment designations. Concentrations of chlorophyll a from periphyton were highest at nutrient-impaired open-canopy sites. Chlorophyll a concentrations from periphyton samples were positively correlated with total nitrogen and total phosphorus at the open- and closed-canopy sites. Correlations were higher at open-canopy sites (p periphyton samples were observed between the open- and closed-canopy sites (p relations between total nitrogen and total phosphorus to periphyton chlorophyll a in wadeable streams from this study were quantified to present potential techniques for determining nutrient concentrations. Linear regression was used to estimate the total nitrogen and total phosphorus concentrations that corresponded to various chlorophyll a concentrations. On the basis of this relation, a median concentration for

  12. Andean region study

    Energy Technology Data Exchange (ETDEWEB)

    NONE

    1999-10-01

    New opportunities for climate change mitigation arising from a higher energy integration among Andean Pact nations were analysed within the framework of the UNEP/GEF Project. Apart from the search for regional mitigation actions, the study was mainly aimed at detecting methodological problems which arise when passing from a strictly national view to the co-ordination of regional actions to deal with climate change. In accordance with the available resources and data, and in view of the mainly methodological nature of the project, it was decided to analyse the opportunities to delve into the energy integration of the Region as regards electricity and natural gas industries and their eventual impact on the emission of greenhouse gases. Although possibilities of setting up electricity and natural gas markets are real, their impacts on GHG emission from the energy system would not prove substantially higher than those which the nations could achieve through the use of their own energy resources, in view that the Andean systems are competitive rather than complementary. More in-depth studies and detail information will be required - unavailable for the present study - to be able to properly evaluate all benefits associated with higher energy integration. Nevertheless, the supply of natural gas to Ecuador seems to be the alternative with the highest impact on GHG emission. If we were to analyse the supply and final consumption of energy jointly, we would most certainly detect additional mitigation options resulting from higher co-operation and co-ordination in the energy field. (EHS)

  13. Seagrass canopy photosynthetic response is a function of canopy density and light environment: a model for Amphibolis griffithii.

    Science.gov (United States)

    Hedley, John D; McMahon, Kathryn; Fearns, Peter

    2014-01-01

    A three-dimensional computer model of canopies of the seagrass Amphibolis griffithii was used to investigate the consequences of variations in canopy structure and benthic light environment on leaf-level photosynthetic saturation state. The model was constructed using empirical data of plant morphometrics from a previously conducted shading experiment and validated well to in-situ data on light attenuation in canopies of different densities. Using published values of the leaf-level saturating irradiance for photosynthesis, results show that the interaction of canopy density and canopy-scale photosynthetic response is complex and non-linear, due to the combination of self-shading and the non-linearity of photosynthesis versus irradiance (P-I) curves near saturating irradiance. Therefore studies of light limitation in seagrasses should consider variation in canopy structure and density. Based on empirical work, we propose a number of possible measures for canopy scale photosynthetic response that can be plotted to yield isoclines in the space of canopy density and light environment. These plots can be used to interpret the significance of canopy changes induced as a response to decreases in the benthic light environment: in some cases canopy thinning can lead to an equivalent leaf level light environment, in others physiological changes may also be required but these alone may be inadequate for canopy survival. By providing insight to these processes the methods developed here could be a valuable management tool for seagrass conservation during dredging or other coastal developments.

  14. Seagrass canopy photosynthetic response is a function of canopy density and light environment: a model for Amphibolis griffithii.

    Directory of Open Access Journals (Sweden)

    John D Hedley

    Full Text Available A three-dimensional computer model of canopies of the seagrass Amphibolis griffithii was used to investigate the consequences of variations in canopy structure and benthic light environment on leaf-level photosynthetic saturation state. The model was constructed using empirical data of plant morphometrics from a previously conducted shading experiment and validated well to in-situ data on light attenuation in canopies of different densities. Using published values of the leaf-level saturating irradiance for photosynthesis, results show that the interaction of canopy density and canopy-scale photosynthetic response is complex and non-linear, due to the combination of self-shading and the non-linearity of photosynthesis versus irradiance (P-I curves near saturating irradiance. Therefore studies of light limitation in seagrasses should consider variation in canopy structure and density. Based on empirical work, we propose a number of possible measures for canopy scale photosynthetic response that can be plotted to yield isoclines in the space of canopy density and light environment. These plots can be used to interpret the significance of canopy changes induced as a response to decreases in the benthic light environment: in some cases canopy thinning can lead to an equivalent leaf level light environment, in others physiological changes may also be required but these alone may be inadequate for canopy survival. By providing insight to these processes the methods developed here could be a valuable management tool for seagrass conservation during dredging or other coastal developments.

  15. Rb/Sr and U/Pb isotopic ages in basement rocks of Mina Gonzalito and Arroyo Salado, Atlantic North-Patagonian Massif, Rio Negro, Argentina

    International Nuclear Information System (INIS)

    Varela, Ricardo; Sato, Ana M.; Cingolani, Carlos A.; Basei, Miguel A.S.; Siga, Oswaldo; Sato, Kei

    1998-01-01

    Isotopic ages from metamorphic and plutonic rocks of the Atlantic area of North Patagonian basement indicate that the main crustal tectonic events occurred during the late Proterozoic to early Paleozoic times. Rb/Sr and U/Pb data in the 550-470 Ma interval suggest an old tecto-thermal activity during the upper Brazilian Cycle (Rio Doce Orogeny). At regional scale, the comparable Neo proterozoic basement of Ventania and sedimentary for eland cover of Tandilia continues to the Northeast, in the Dom Feliciano Belt. A possible correlation of the North Patagonian basement with igneous-metamorphic relics of Central Argentina (Pampean Ranges of San Luis-Cordoba and at La Pampa province) is also indicated. (author)

  16. Andean cutaneous leishmaniasis (Andean-CL, uta) in Peru and Ecuador: the vector Lutzomyia sand flies and reservoir mammals.

    Science.gov (United States)

    Hashiguchi, Yoshihisa; Gomez L, Eduardo A; Cáceres, Abraham G; Velez, Lenin N; Villegas, Nancy V; Hashiguchi, Kazue; Mimori, Tatsuyuki; Uezato, Hiroshi; Kato, Hirotomo

    2018-02-01

    The vector Lutzomyia sand flies and reservoir host mammals of the Leishmania parasites, causing the Andean cutaneous leishmaniasis (Andean-CL, uta) in Peru and Ecuador were thoroughly reviewed, performing a survey of literatures including our unpublished data. The Peruvian L. (V.) peruviana, a principal Leishmania species causing Andean-CL in Peru, possessed three Lutzomyia species, Lu. peruensis, Lu. verrucarum and Lu. ayacuchensis as vectors, while the Ecuadorian L. (L.) mexicana parasite possessed only one species Lu. ayacuchensis as the vector. Among these, the Ecuadorian showed a markedly higher rate of natural Leishmania infections. However, the monthly and diurnal biting activities were mostly similar among these vector species was in both countries, and the higher rates of infection (transmission) reported, corresponded to sand fly's higher monthly-activity season (rainy season). The Lu. tejadai sand fly participated as a vector of a hybrid parasite of L. (V.) braziliensis/L. (V.) peruviana in the Peruvian Andes. Dogs were considered to be principal reservoir hosts of the L. (V.) peruviana and L. (L.) mexicana parasites in both countries, followed by other sylvatic mammals such as Phyllotis andium, Didelphis albiventris and Akodon sp. in Peru, and Rattus rattus in Ecuador, but information on the reservoir hosts/mammals was extremely poor in both countries. Thus, the Peruvian disease form demonstrated more complicated transmission dynamics than the Ecuadorian. A brief review was also given to the control of vector and reservoirs in the Andes areas. Such information is crucial for future development of the control strategies of the disease. Copyright © 2017 Elsevier B.V. All rights reserved.

  17. Estado del conocimiento de humedales del norte patagónico (Argentina: aspectos relevantes e importancia para la conservación de la biodiversidad regional State of the knowledge of north Patagonian wetlands (Argentina: major aspects and importance for regional biodiversity conservation

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    MARÍA G PEROTTI

    2005-12-01

    Full Text Available Las áreas de humedal ocupan casi el 5 % del territorio de la Patagonia argentina. En la zona extrandina y el desierto patagónico estos ecosistemas son esenciales para sostener numerosas especies de fauna y flora silvestre. Además, los humedales del norte patagónico permiten el desarrollo de comunidades acuáticas complejas y constituyen el hábitat crítico de grupos de organismos como los peces y los anfibios incluidos en listados de conservación prioritaria. Estos ecosistemas tienen un funcionamiento complejo que depende estrechamente de las fluctuaciones de las variables meteorológicas y son por lo tanto muy sensibles a los efectos del cambio climático. En la actualidad el uso de la tierra, la introducción de especies y la interacción de estos aspectos con el cambio climático constituyen las variables de mayor impacto sobre estos ambientes patagónicos. En este trabajo se presenta información geográfica, geomorfológica y climática de un número de humedales del norte de la Patagonia argentina. Por otra parte, se sintetiza información sobre la flora y la distribución de peces y anfibios con el propósito de enfatizar la importancia de estos ambientes en el mantenimiento de la biodiversidad regional. Por último, se señalan los procesos que actualmente afectan a estos sistemas poniendo en evidencia la necesidad de obtención de conocimientos básicos para el diseño de planes de manejo y conservación de sus comunidades biológicasAlmost 5 % of the lansdscape of Patagonia is occupied by wetlands. In the extra-andean region and the patagonian desert, wetlands are essential for sustaining biodiversity and wildlife. Besides, North patagonian wetlands present complex aquatic communities and provide habitat for threatened species of fishes and amphibians. These ecosystems have complex dynamics mostly driven by climatic fluctuations which make them vulnerable to the effect of climate change. Nowadays, the main impact on patagonian

  18. The Patagonian Orocline: Paleomagnetic evidence of a large counter-clockwise rotation during the closure of the Rocas Verdes basin.

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    Poblete, Fernando; Roperch, Pierrick; Herve, Francisco; Ramirez, Cristobal; Arriagada, Cesar

    2014-05-01

    The southernmost Andes of Patagonia and Tierra del Fuego present a prominent arc-shaped structure, the Patagonian Orocline. Despite the fact that this major structure was already described by Alfred Wegener in his famous textbook in 1929, few paleomagnetic studies have been attempted to describe the rotations associated with the formation of the Patagonian Orocline. In this study we present a paleomagnetic and anisotropy of magnetic susceptibility (AMS) study from more than 130 sites obtained from the Ultima Esperanza region (NS structures at ~51°S) to Península Hardy, south of the Beagle Channel at ~55°S. 45 sites were sampled in early-cretaceous gabbros (gabbro complex), mid-cretaceous tonalites and granodiorites (Canal Beagle group) and Paleocene intrusive rocks (Seno Año Nuevo group) from the South Patagonian batholith, 4 sites from the late Jurassic Hardy formation, a volcanic succession outcropping in Hardy Peninsula and Stewart Island, 9 sites were drilled in the lower cretaceous sedimentary infill of the Rocas Verdes Basin, 3 sites from the Tortuga ophiolite, a quasi-oceanic crust related to the opening of the Rocas Verdes basin. 80 sites were sampled in Cretaceous to Miocene sedimentary rocks from the Magallanes fold and thrust belt and Magallanes Basin. Characteristic Remanent Magnetizations (ChRMs) obtained from the Rocas Verdes Basin tectonic province correspond to secondary magnetizations postdating the early phase of folding. Pyrrhotite is the main magnetic carrier in some of these sites. ChRMs from the South Patagonian Batholith correspond to a primary magnetization. These rocks record about 90° counterclockwise rotations south of the Beagle channel. Few sites from sediments of the Magallanes fold and thrust belt have stable ChRM. The available paleomagnetic results show that no rotation has occurred in the Provincia of Ultima Esperanza (51.5°S), at least, for the last 60 Ma. In the southern part of Provincia de Magallanes and Tierra del Fuego

  19. From Dearth to El Dorado: Andean Nature, Plate Tectonics, and the Ontologies of Ecuadorian Resource Wealth

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    David Kneas

    2018-03-01

    Full Text Available Since the early 1990s, the Ecuadorian government has pledged to convert the nation into a “mining country” of global standing. Contemporary claims of mineral wealth, however, stand in stark contrast to previous assessments. Indeed, through much of the 20th century, geologists described Ecuador as a country of mineral dearth. Exploring the process through which Ecuador seemingly transitioned from a nation of resource scarcity to one of mineral plenty, I demonstrate how assessments of Ecuador’s resource potential relate to ideas of Andean nature. Promoters of resource abundance have emphasized Andean uniformity and equivalence—the notion that Ecuador’s mineral wealth is inevitable by virtue of the resource richness of its Andean neighbors. Geologists who have questioned Ecuador’s mineral content, on the other hand, have emphasized Andean heterogeneity. In the recent promotion of Ecuador’s resource potential, notions of Andean uniformity have been bolstered by models of subsoil copper that emerged in the in 1970s in the context of plate-tectonic theory. In highlighting the linkage between ideas of Andean nature and appraisals of Ecuadorian resource potential since the late 19th century, I outline the dialectics between nature and natural resources that underpin processes of resource becoming.

  20. Quaternary Tectonic and Climatic Processes shaping the Central Andean hyperarid forearc (southern Peru)

    Science.gov (United States)

    Audin, Laurence; Benavente, Carlos; Zerathe, Swann; Saillard, Marianne; Hall, Sarah R.; Farber, Daniel L.

    2015-04-01

    Understanding the forearc structure and processes related to Quaternary evolution and uplift of the Western Andean Cordillera remains an outstanding scientific issue. Models of Andean Plateau evolution based on Tertiary volcanic stratigraphy since 5Ma suggest that the deformation was focused along the eastern margin of the plateau and that minimal uplift occurred along the Pacific margin. On the contrary, new tectonic data and Quaternary surface 10Be dating highlight the presence of recently active deformation, incision and alluvial processes within the upper Andean forearc together with a regional uplift of the coastal zone. Additionally, the high obliquity observed in the northern Arica Bend region makes it an ideal target to discuss whether partitioning of the oblique convergence is accommodated by the neotectonic features that dissect the Quaternary forearc. Our goals are both to decipher the Quaternary tectonic and climatic processes shaping the hyperarid forearc along strike and across strike. Finally, we aim to quantify the respective influence of these factors in the overall uplift of the Western Andes. Indeed, sequences of pediment surfaces, landslide products, paleolake deposits and marine terraces found along the oblique Peruvian margin are a unique set of datable markers that can be used to quantify the rates of Quaternary processes. In this study, we focus on the southern Peru hyperarid Atacama area where regional surfaces and tectonic markers (scarps, folds, temporary streams and paleolake levels offsets…) are well preserved for the Quaternary timescale. Numerous landsliding events align on the major fault segments and reflect Plio-Pleistocene climatic and tectonic activity together with filled and strath terraces. As the present day sea-level is one of the highest levels recorded for Quaternary time span, any emerged marine terrace is preserved by tectonic coastal uplift. In particular, the geomorphic and chronologic correlation between marine and

  1. Further Studies on the Physical and Biogeochemical Causes for Large Interannual Changes in the Patagonian Shelf Spring-Summer Phytoplankton Bloom Biomass

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    Signorini, Sergio R.; Garcia, Virginia M.T.; Piola, Alberto R.; Evangelista, Heitor; McClain, Charles R.; Garcia, Carlos A.E.; Mata, Mauricio M.

    2009-01-01

    A very strong and persistent phytoplankton bloom was observed by ocean color satellites during September - December 2003 along the northern Patagonian shelf. The 2003 bloom had the highest extent and chlorophyll a (Chl-a) concentrations of the entire Sea-viewing Wide Field-of-view Sensor (SeaWiFS) period (1997 to present). SeaWiFS-derived Chl-a exceeded 20 mg/cu m in November at the bloom center. The bloom was most extensive in December when it spanned more than 300 km across the shelf and nearly 900 km north-south (35degS to 43degS). The northward reach and the deep penetration on the shelf of the 2003 bloom were quite anomalous when compared with other years, which showed the bloom more confined to the Patagonian shelf break (PSB). The PSB bloom is a conspicuous austral spring-summer feature detected by ocean color satellites and its timing can be explained using the Sverdrup critical depth theory. Based on high-resolution numerical simulations, in situ and remote sensing data, we provide some suggestions for the probable mechanisms responsible for that large interannual change of biomass as seen by ocean color satellites. Potential sources of macro and micro (e.g., Fe) nutrients that sustain the high phytoplankton productivity of the Patagonian shelf waters are identified, and the most likely physical processes that maintain the nutrient balance in the region are discussed.

  2. Distinctive channel geometry and riparian vegetation: A geomorphic classification for arid ephemeral streams

    Science.gov (United States)

    Sutfin, N.; Shaw, J. R.; Wohl, E. E.; Cooper, D.

    2012-12-01

    Interactions between hydrology, channel form, and riparian vegetation along arid ephemeral streams are not thoroughly understood and current stream classifications do not adequately represent variability in channel geometry and associated riparian communities. Relatively infrequent hydrologic disturbances in dryland environments are responsible for creation and maintenance of channel form that supports riparian communities. To investigate the influence of channel characteristics on riparian vegetation in the arid southwestern United States, we develop a geomorphic classification for arid ephemeral streams based on the degree of confinement and the composition of confining material that provide constraints on available moisture. Our conceptual model includes five stream types: 1) bedrock channels entirely confined by exposed bedrock and devoid of persistent alluvium; 2) bedrock with alluvium channels at least partially confined by bedrock but containing enough alluvium to create bedforms that persist through time; 3) incised alluvium channels bound only by unconsolidated alluvial material into which they are incised; 4) braided washes that exhibit multi-thread, braided characteristics regardless of the composition of confining material; and 5) piedmont headwater 0-2nd order streams (Strahler) confined only by unconsolidated alluvium and which initiate as secondary channels on piedmont surfaces. Eighty-six study reaches representing the five stream types were surveyed on the U.S. Army Yuma Proving Ground in the Sonoran Desert of southwestern Arizona. Non-parametric multivariate analysis of variance (PERMANOVA) indicates significant differences between the five stream types with regards to channel geometry (i.e., stream gradient, width-to-depth ratio, the ratio between valley width and channel width (Wv/Wc), shear stress, and unit stream power) and riparian vegetation (i.e., presence and canopy coverage by species, canopy stratum, and life form). Discriminant analysis

  3. Momentum and scalar transport within a vegetation canopy following atmospheric stability and seasonal canopy changes: the CHATS experiment

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    S. Dupont

    2012-07-01

    Full Text Available Momentum and scalar (heat and water vapor transfer between a walnut canopy and the overlying atmosphere are investigated for two seasonal periods (before and after leaf-out, and for five thermal stability regimes (free and forced convection, near-neutral condition, transition to stable, and stable. Quadrant and octant analyses of momentum and scalar fluxes followed by space-time autocorrelations of observations from the Canopy Horizontal Array Turbulence Study's (CHATS thirty meter tower help characterize the motions exchanging momentum, heat, and moisture between the canopy layers and aloft.

    During sufficiently windy conditions, i.e. in forced convection, near-neutral and transition to stable regimes, momentum and scalars are generally transported by sweep and ejection motions associated with the well-known canopy-top "shear-driven" coherent eddy structures. During extreme stability conditions (both unstable and stable, the role of these "shear-driven" structures in transporting scalars decreases, inducing notable dissimilarity between momentum and scalar transport.

    In unstable conditions, "shear-driven" coherent structures are progressively replaced by "buo-yantly-driven" structures, known as thermal plumes; which appear very efficient at transporting scalars, especially upward thermal plumes above the canopy. Within the canopy, downward thermal plumes become more efficient at transporting scalars than upward thermal plumes if scalar sources are located in the upper canopy. We explain these features by suggesting that: (i downward plumes within the canopy correspond to large downward plumes coming from above, and (ii upward plumes within the canopy are local small plumes induced by canopy heat sources where passive scalars are first injected if there sources are at the same location as heat sources. Above the canopy, these small upward thermal plumes aggregate to form larger scale upward thermal plumes. Furthermore, scalar

  4. Infection with Toxoplasma gondii in a red kangaroo (Macropus rufus and a Patagonian mara (Dolichotis patagonum in captivity

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    Nataly Díaz-Ayala

    Full Text Available Abstract Toxoplasmosis is an infectious, zoonotic and parasitic disease, caused by Toxoplasma gondii. In this manucript, two cases of infection with T. gondii in captive animals from a zoological park in the central region of Chile are described. One case was a red kangaroo (Macropus rufus, which is highly susceptible to the infection, and the other was a Patagonian mara (Dolichotis patagonum, a rodent in which there is no previous report of the infection. Both animals had myocarditis, with the presence of intralesional tachizoites and cysts suggestive of infection with T. gondii. This infection was confirmed by immunohistochemistry in both animals. The origin of the infection is unknown, but it is likely that free ranging domestic felines were associated with the dissemination of the parasites. This highlights the importance of controlling the domestic animal populations in zoological parks. To the best of our knowledge, this is the first time that T. gondii infection is described in a Patagonian mara, adding a new host for this infectious agent.

  5. Organochlorine compounds in soils and sediments of the mountain Andean Lakes

    International Nuclear Information System (INIS)

    Borghini, Francesca; Grimalt, Joan O.; Sanchez-Hernandez, Juan C.; Barra, Ricardo; Garcia, Carlos J. Torres; Focardi, Silvano

    2005-01-01

    Semi-volatile organochlorine compounds (OC) were analyzed in remote Andean soils and lake sediments. The sampling sites covered a wide latitudinal gradient from 18 deg. S to 46 deg. S along Chile and an altitudinal gradient (10-4500 m). The concentrations were in the order of background levels, involving absence of major pollution sources in the high mountain areas. Significant correlations were found between log-transformed concentrations of hexachlorobenzene, α- and γ-hexachlorocyclohexane in soils and total organic content (TOC). In addition, TOC-normalized concentrations of the most volatile OC showed a significant linear dependence with air temperature. This good agreement points to temperature as a significant factor for the retention of long range transported OC in remote ecosystems such as the Andean mountains, although other variables should not be totally excluded. The highest concentrations of OCs were achieved in the sites located at highest altitude and lowest temperature of the dataset. - Distribution of persistent organochlorine compounds in the Andean Mountain lakes is influenced by temperature

  6. Estimating Canopy Dark Respiration for Crop Models

    Science.gov (United States)

    Monje Mejia, Oscar Alberto

    2014-01-01

    Crop production is obtained from accurate estimates of daily carbon gain.Canopy gross photosynthesis (Pgross) can be estimated from biochemical models of photosynthesis using sun and shaded leaf portions and the amount of intercepted photosyntheticallyactive radiation (PAR).In turn, canopy daily net carbon gain can be estimated from canopy daily gross photosynthesis when canopy dark respiration (Rd) is known.

  7. Predicting Polylepis distribution: vulnerable and increasingly important Andean woodlands

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    Brian R. Zutta

    2012-11-01

    Full Text Available Polylepis woodlands are a vital resource for preserving biodiversity and hydrological functions, which will be altered by climate change and challenge the sustainability of local human communities. However, these highaltitude Andean ecosystems are becoming increasingly vulnerable due to anthropogenic pressure including fragmentation, deforestation and the increase in livestock. Predicting the distribution of native woodlands has become increasingly important to counteract the negative effects of climate change through reforestation and conservation. The objective of this study was to develop and analyze the distribution models of two species that form extensive woodlands along the Andes, namely Polylepis sericea and P. weberbaueri. This study utilized the program Maxent, climate and remotely sensed environmental layers at 1 km resolution. The predicted distribution model for P. sericea indicated that the species could be located in a variety of habitats along the Andean Cordillera, while P. weberbaueri was restricted to the high elevations of southern Peru and Bolivia. For both species, elevation and temperature metrics were the most significant factors for predicted distribution. Further model refinement of Polylepis and other Andean species using increasingly available satellite data demonstrate the potential to help define areas of diversity and improve conservation strategies for the Andes.

  8. Canopy arthropod responses to experimental canopy opening and debris deposition in a tropical rainforest subject to hurricanes

    Science.gov (United States)

    Timothy D. Schowalter; Michael R. Willig; Steven J. Presley

    2014-01-01

    We analyzed responses of canopy arthropods on seven representative early and late successional overstory and understory tree species to a canopy trimming experiment designed to separate effects of canopy opening and debris pulse (resulting from hurricane disturbance) in a tropical rainforest ecosystem at the Luquillo Experimental Forest Long-Term Ecological Research (...

  9. Use of spatial capture–recapture to estimate density of Andean bears in northern Ecuador

    Science.gov (United States)

    Molina, Santiago; Fuller, Angela K.; Morin, Dana J.; Royle, J. Andrew

    2017-01-01

    The Andean bear (Tremarctos ornatus) is the only extant species of bear in South America and is considered threatened across its range and endangered in Ecuador. Habitat loss and fragmentation is considered a critical threat to the species, and there is a lack of knowledge regarding its distribution and abundance. The species is thought to occur at low densities, making field studies designed to estimate abundance or density challenging. We conducted a pilot camera-trap study to estimate Andean bear density in a recently identified population of Andean bears northwest of Quito, Ecuador, during 2012. We compared 12 candidate spatial capture–recapture models including covariates on encounter probability and density and estimated a density of 7.45 bears/100 km2 within the region. In addition, we estimated that approximately 40 bears used a recently named Andean bear corridor established by the Secretary of Environment, and we produced a density map for this area. Use of a rub-post with vanilla scent attractant allowed us to capture numerous photographs for each event, improving our ability to identify individual bears by unique facial markings. This study provides the first empirically derived density estimate for Andean bears in Ecuador and should provide direction for future landscape-scale studies interested in conservation initiatives requiring spatially explicit estimates of density.

  10. Traveling around Cape Horn: Otolith chemistry reveals a mixed stock of Patagonian hoki with separate Atlantic and Pacific spawning grounds

    Science.gov (United States)

    Schuchert, P.C.; Arkhipkin, A.I.; Koenig, A.E.

    2010-01-01

    Trace element fingerprints of edge and core regions in otoliths from 260 specimens of Patagonian hoki, Macruronus magellanicus L??nnberg, 1907, were analyzed by LA-ICPMS to reveal whether this species forms one or more population units (stocks) in the Southern Oceans. Fish were caught on their spawning grounds in Chile and feeding grounds in Chile and the Falkland Islands. Univariate and multivariate analyses of trace element concentrations in the otolith edges, which relate to the adult life of fish, could not distinguish between Atlantic (Falkland) and Pacific (Chile) hoki. Cluster analyses of element concentrations in the otolith edges produced three different clusters in all sample areas indicating high mixture of the stocks. Cluster analysis of trace element concentrations in the otolith cores, relating to juvenile and larval life stages, produced two separate clusters mainly distinguished by 137Ba concentrations. The results suggest that Patagonian hoki is a highly mixed fish stock with at least two spawning grounds around South America. ?? 2009 Elsevier B.V.

  11. Stream invertebrate productivity linked to forest subsidies: 37 stream-years of reference and experimental data.

    Science.gov (United States)

    Wallace, J Bruce; Eggert, Susan L; Meyer, Judy L; Webster, Jackson R

    2015-05-01

    Riparian habitats provide detrital subsidies of varying quantities and qualities to recipient ecosystems. We used long-term data from three reference streams (covering 24 stream-years) and 13-year whole-stream organic matter manipulations to investigate the influence of terrestrial detrital quantity and quality on benthic invertebrate community structure, abundance, biomass, and secondary production in rockface (RF) and mixed substrates (MS) of forested headwater streams. Using a mesh canopy covering the entire treatment stream, we examined effects of litter ex'clusion, small- and large-wood removal, and addition of artificial wood (PVC) and leaves of varying quality on organic matter standing crops and invertebrate community structure and function. We assessed differences in functional feeding group distribution between substrate types as influenced by organic matter manipulations and long-term patterns of predator and prey production in manipulated vs. reference years. Particulate organic matter standing crops in MS of the treatment stream declined drastically with each successive year of litter exclusion, approaching zero after three years. Monthly invertebrate biomass and annual secondary production was positively related to benthic organic matter in the MS habitats. Rockface habitats exhibited fewer changes than MS habitats across all organic matter manipulations. With leaf addition, the patterns of functional group distribution among MS and RF habitats returned to patterns seen in reference streams. Secondary production per unit organic matter standing crop was greatest for the leaf addition period, followed by the reference streams, and significantly less for the litter exclusion and wood removal periods. These data indicate that the limited organic matter remaining in the stream following litter exclusion and wood removal was more refractory than that in the reference streams, whereas the added leaf material was more labile and readily converted into

  12. The impact of modifying photosystem antenna size on canopy photosynthetic efficiency-Development of a new canopy photosynthesis model scaling from metabolism to canopy level processes.

    Science.gov (United States)

    Song, Qingfeng; Wang, Yu; Qu, Mingnan; Ort, Donald R; Zhu, Xin-Guang

    2017-12-01

    Canopy photosynthesis (A c ) describes photosynthesis of an entire crop field and the daily and seasonal integrals of A c positively correlate with daily and seasonal biomass production. Much effort in crop breeding has focused on improving canopy architecture and hence light distribution inside the canopy. Here, we develop a new integrated canopy photosynthesis model including canopy architecture, a ray tracing algorithm, and C 3 photosynthetic metabolism to explore the option of manipulating leaf chlorophyll concentration ([Chl]) for greater A c and nitrogen use efficiency (NUE). Model simulation results show that (a) efficiency of photosystem II increased when [Chl] was decreased by decreasing antenna size and (b) the light received by leaves at the bottom layers increased when [Chl] throughout the canopy was decreased. Furthermore, the modelling revealed a modest ~3% increase in A c and an ~14% in NUE was accompanied when [Chl] reduced by 60%. However, if the leaf nitrogen conserved by this decrease in leaf [Chl] were to be optimally allocated to other components of photosynthesis, both A c and NUE can be increased by over 30%. Optimizing [Chl] coupled with strategic reinvestment of conserved nitrogen is shown to have the potential to support substantial increases in A c , biomass production, and crop yields. © 2017 The Authors Plant, Cell & Environment Published by John Wiley & Sons Ltd.

  13. Conflicting evolutionary patterns due to mitochondrial introgression and multilocus phylogeography of the Patagonian freshwater crab Aegla neuquensis.

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    Brian R Barber

    Full Text Available BACKGROUND: Multiple loci and population genetic methods were employed to study the phylogeographic history of the Patagonian freshwater crab Aegla neuquensis (Aeglidae: Decopoda. This taxon occurs in two large river systems in the Patagonian Steppe, from the foothills of the Andes Mountains east to the Atlantic Ocean. METHODOLOGY/PRINCIPAL FINDINGS: A nuclear phylogeny and multilocus nested clade phylogeographic analysis detected a fragmentation event between the Negro and Chico-Chubut river systems. This event occurred approximately 137 thousand years ago. An isolation-with-migration analysis and maximum-likelihood estimates of gene flow showed asymmetrical exchange of genetic material between these two river systems exclusively in their headwaters. We used information theory to determine the best-fit demographic history between these two river systems under an isolation-with-migration model. The best-fit model suggests that the Negro and the ancestral populations have the same effective population sizes; whereas the Chico-Chubut population is smaller and shows that gene flow from the Chico-Chubut into the Negro is four times higher than in the reverse direction. Much of the Chico-Chubut system appears to have only been recently colonized while the Negro populations appear to have been in place for most of the evolutionary history of this taxon. CONCLUSIONS/SIGNIFICANCE: Due to mitochondrial introgression, three nuclear loci provided different phylogeographic resolution than the three mitochondrial genes for an ancient fragmentation event observed in the nuclear phylogeny. However, the mitochondrial locus provided greater resolution on more recent evolutionary events. Our study, therefore, demonstrates the need to include both nuclear and mitochondrial loci for a more complete understanding of evolutionary histories and associated phylogeographic events. Our results suggest that gene flow between these systems, before and after fragmentation

  14. Impacts of an invasive snail (Tarebia granifera) on nutrient cycling in tropical streams: the role of riparian deforestation in Trinidad, West Indies.

    Science.gov (United States)

    Moslemi, Jennifer M; Snider, Sunny B; Macneill, Keeley; Gilliam, James F; Flecker, Alexander S

    2012-01-01

    Non-native species and habitat degradation are two major catalysts of environmental change and often occur simultaneously. In freshwater systems, degradation of adjacent terrestrial vegetation may facilitate introduced species by altering resource availability. Here we examine how the presence of intact riparian cover influences the impact of an invasive herbivorous snail, Tarebia granifera, on nitrogen (N) cycling in aquatic systems on the island of Trinidad. We quantified snail biomass, growth, and N excretion in locations where riparian vegetation was present or removed to determine how snail demographics and excretion were related to the condition of the riparian zone. In three Neotropical streams, we measured snail biomass and N excretion in open and closed canopy habitats to generate estimates of mass- and area-specific N excretion rates. Snail biomass was 2 to 8 times greater and areal N excretion rates ranged from 3 to 9 times greater in open canopy habitats. Snails foraging in open canopy habitat also had access to more abundant food resources and exhibited greater growth and mass-specific N excretion rates. Estimates of ecosystem N demand indicated that snail N excretion in fully closed, partially closed, and open canopy habitats supplied 2%, 11%, and 16% of integrated ecosystem N demand, respectively. We conclude that human-mediated riparian canopy loss can generate hotspots of snail biomass, growth, and N excretion along tropical stream networks, altering the impacts of an invasive snail on the biogeochemical cycling of N.

  15. A Two-Big-Leaf Model for Canopy Temperature, Photosynthesis, and Stomatal Conductance.

    Science.gov (United States)

    Dai, Yongjiu; Dickinson, Robert E.; Wang, Ying-Ping

    2004-06-01

    The energy exchange, evapotranspiration, and carbon exchange by plant canopies depend on leaf stomatal control. The treatment of this control has been required by land components of climate and carbon models. Physiological models can be used to simulate the responses of stomatal conductance to changes in atmospheric and soil environments. Big-leaf models that treat a canopy as a single leaf tend to overestimate fluxes of CO2 and water vapor. Models that differentiate between sunlit and shaded leaves largely overcome these problems.A one-layered, two-big-leaf submodel for photosynthesis, stomatal conductance, leaf temperature, and energy fluxes is presented in this paper. It includes 1) an improved two stream approximation model of radiation transfer of the canopy, with attention to singularities in its solution and with separate integrations of radiation absorption by sunlit and shaded fractions of canopy; 2) a photosynthesis stomatal conductance model for sunlit and shaded leaves separately, and for the simultaneous transfers of CO2 and water vapor into and out of the leaf—leaf physiological properties (i.e., leaf nitrogen concentration, maximum potential electron transport rate, and hence photosynthetic capacity) vary throughout the plant canopy in response to the radiation weight time-mean profile of photosynthetically active radiation (PAR), and the soil water limitation is applied to both maximum rates of leaf carbon uptake by Rubisco and electron transport, and the model scales up from leaf to canopy separately for all sunlit and shaded leaves; 3) a well-built quasi-Newton Raphson method for simultaneous solution of temperatures of the sunlit and shaded leaves.The model was incorporated into the Common Land Model (CLM) and is denoted CLM 2L. It was driven with observational atmospheric forcing from two forest sites [Anglo-Brazilian Amazonian Climate Observation Study (ABRACOS) and Boreal Ecosystem Atmosphere Study (BOREAS)] for 2 yr of simulation. The

  16. Migratory timing, rate, routes and wintering areas of White-crested Elaenia (Elaenia albiceps chilensis, a key seed disperser for Patagonian forest regeneration.

    Directory of Open Access Journals (Sweden)

    Susana Patricia Bravo

    Full Text Available Migratory animals often play key ecological roles within the communities they visit throughout their annual journeys. As a consequence of the links between biomes mediated by migrants, changes in one biome could affect remote areas in unpredictable ways. Migratory routes and timing of most Neotropical austral migrants, which breed at south temperate latitudes of South America and overwinter closer to or within tropical latitudes of South America, have yet to be described in detail. As a result, our understanding about how these birds provide links between South American biomes is almost non-existent. White-crested Elaenia (Elaenia albiceps chilensis is a long-distance austral migrant that breeds in the Patagonian Forest biome and overwinters in tropical South America. Because this small flycatcher plays a key role in the regeneration of this ecosystem, our objective was to describe the annual cycle of White-crested elaenias to evaluate the degree of migratory connectivity between breeding and wintering areas and therefore to determine if there are specific biomes of northern South America linked by elaenias to Patagonian forests. Fifteen individuals were successfully tracked throughout a complete migration cycle using miniature light-level geolocators. All individuals resided and moved through the same general regions. During fall (March-April-May, elaenias were located in the Caatinga and the Atlantic Forest biomes, from Rio de Janeiro to the region near Salvador da Bahia, Brazil. During winter (June-July-Aug., birds were located further inland, within the Cerrado biome. Birds used three different routes during fall migration. Our results indicate that some individuals use a direct route, flying between 500-600 km/day, crossing desert and grasslands, while others took a detour, flying 100-200 km/day through forested areas with refueling opportunities. All birds used the Yunga forest during spring migration, with ten out of 15 individuals

  17. Canopy for VERAView Installation Guide

    Energy Technology Data Exchange (ETDEWEB)

    Lee, Ronald W. [Oak Ridge National Lab. (ORNL), Oak Ridge, TN (United States)

    2016-09-12

    With the addition of the 3D volume slicer widget, VERAView now relies on Mayavi and its dependents. Enthought's Canopy Python environment provides everything VERAView needs, and pre-built Canopy versions for Windows, Mac OSX, and Linux can be downloaded.

  18. Plant photomorphogenesis and canopy growth

    Science.gov (United States)

    Ballare, Carlos L.; Scopel, Ana L.

    1994-01-01

    An important motivation for studying photomorphogenesis is to understand the relationships among plant photophysiology in canopies, canopy productivity, and agronomic yield. This understanding is essential to optimize lighting systems used for plant farming in controlled environments (CE) and for the design of genetically engineered crop strains with altered photoresponses. This article provides an overview of some basic principles of plant photomorphogenesis in canopies and discusses their implications for (1) scaling up information on plant photophysiology from individual plants in CE to whole canopies in the field, and (2) designing lighting conditions to increase plant productivity in CE used for agronomic purposes (e.g. space farming in CE Life Support Systems). We concentrate on the visible (lambda between 400 and 700 nm) and far-infrared (FR; lambda greater than 700 nm) spectral regions, since the ultraviolet (UV; 280 to 400 nm) is covered by other authors in this volume.

  19. Plant photomorphogenesis and canopy growth

    Energy Technology Data Exchange (ETDEWEB)

    Ballare, C.L.; Scopel, A.L. [Universidad de Buenos Aires (Argentina)

    1994-12-31

    An important motivation for studying photomorphogenesis is to understand the relationships among plant photophysiology in canopies, canopy productivity, and agronomic yield. This understanding is essential to optimize lighting systems used for plant farming in controlled environments (CE) and for the design of genetically engineered crop strains with altered photoresponses. This article provides an overview of some basic principles of plant photomorphogenesis in canopies and discusses their implications for (1) scaling up information on plant photophysiology from individual plants in CE to whole canopies in the field, and (2), designing lighting conditions to increase plant productivity in CE used for agronomic purposes [e.g. space farming in CE Life-Support-Systems]. We concentrate on the visible ({lambda} between 400 and 700 nm) and far red (FR; {lambda} > 700 nm) spectral regions, since the ultraviolet (UV; 280 to 400 nm) is covered by other authors in this volume.

  20. Andean contributions to the biogeochemistry of the amazon river system

    Directory of Open Access Journals (Sweden)

    1995-01-01

    Atlántico. Un nuevo programa colaborativo de investigación se inició en 1994 con el propósito de caracterizar de una manera más completa la biogeoquímica de los ríos andinos. Contributions from Andean rivers may play a significant role in determining the basin-wide biogeochemistry integrated into the mainstem Amazon River of Brazil. Concentration data for organic C, NO3-, and PO43- in Andean rivers are highly variable and reveal no clear spatial or altitudinal patterns. Concentrations measured in Andean rivers are similar to those reported in the mainstem Amazon river and its major tributaries. Explanations of processes which alter Andean-derived particulates and solutes as they exit the Cordillera are only speculative at this time, but their net effect is to diminish Andean signals through decomposition and dilution by lowland inputs. The 13C of particulate and dissolved organic matter in the mainstem Amazon provides evidence that some fraction of Andean derived material persists within the river system, ultimately to be discharged to the Atlantic Ocean. In 1994 a new collaborative research program was launched to further characterize the biogeochemistry of Andean rivers.

  1. Impact of Canopy Coupling on Canopy Average Stomatal Conductance Across Seven Tree Species in Northern Wisconsin

    Science.gov (United States)

    Ewers, B. E.; Mackay, D. S.; Samanta, S.; Ahl, D. E.; Burrows, S. S.; Gower, S. T.

    2001-12-01

    Land use changes over the last century in northern Wisconsin have resulted in a heterogeneous landscape composed of the following four main forest types: northern hardwoods, northern conifer, aspen/fir, and forested wetland. Based on sap flux measurements, aspen/fir has twice the canopy transpiration of northern hardwoods. In addition, daily transpiration was only explained by daily average vapor pressure deficit across the cover types. The objective of this study was to determine if canopy average stomatal conductance could be used to explain the species effects on tree transpiration. Our first hypothesis is that across all of the species, stomatal conductance will respond to vapor pressure deficit so as to maintain a minimum leaf water potential to prevent catostrophic cavitiation. The consequence of this hypothesis is that among species and individuals there is a proportionality between high stomatal conductance and the sensitivity of stomatal conductance to vapor pressure deficit. Our second hypothesis is that species that do not follow the proportionality deviate because the canopies are decoupled from the atmosphere. To test our two hypotheses we calculated canopy average stomatal conductance from sap flux measurements using an inversion of the Penman-Monteith equation. We estimated the canopy coupling using a leaf energy budget model that requires leaf transpiration and canopy aerodynamic conductance. We optimized the parameters of the aerodynamic conductance model using a Monte Carlo technique across six parameters. We determined the optimal model for each species by selecting parameter sets that resulted in the proportionality of our first hypothesis. We then tested the optimal energy budget models of each species by comparing leaf temperature and leaf width predicted by the models to measurements of each tree species. In red pine, sugar maple, and trembling aspen trees under high canopy coupling conditions, we found the hypothesized proportionality

  2. Comparing two periphyton collection methods commonly used for stream bioassessment and the development of numeric nutrient standards.

    Science.gov (United States)

    Rodman, Ashley R; Scott, J Thad

    2017-07-01

    Periphyton is an important component of stream bioassessment, yet methods for quantifying periphyton biomass can differ substantially. A case study within the Arkansas Ozarks is presented to demonstrate the potential for linking chlorophyll-a (chl-a) and ash-free dry mass (AFDM) data sets amassed using two frequently used periphyton sampling protocols. Method A involved collecting periphyton from a known area on the top surface of variably sized rocks gathered from relatively swift-velocity riffles without discerning canopy cover. Method B involved collecting periphyton from the entire top surface of cobbles systematically gathered from riffle-run habitat where canopy cover was intentionally avoided. Chl-a and AFDM measurements were not different between methods (p = 0.123 and p = 0.550, respectively), and there was no interaction between method and time in the repeated measures structure of the study. However, significantly different seasonal distinctions were observed for chl-a and AFDM from all streams when data from the methods were combined (p methods may effectively be used together with some minor considerations due to potential confounding factors. This study provides motivation for the continued investigation of combining data sets derived from multiple methods of data collection, which could be useful in stream bioassessment and particularly important for the development of regional stream nutrient criteria for the southern Ozarks.

  3. Remote sensing of sagebrush canopy nitrogen

    Science.gov (United States)

    Mitchell, Jessica J.; Glenn, Nancy F.; Sankey, Temuulen T.; Derryberry, DeWayne R.; Germino, Matthew J.

    2012-01-01

    This paper presents a combination of techniques suitable for remotely sensing foliar Nitrogen (N) in semiarid shrublands – a capability that would significantly improve our limited understanding of vegetation functionality in dryland ecosystems. The ability to estimate foliar N distributions across arid and semi-arid environments could help answer process-driven questions related to topics such as controls on canopy photosynthesis, the influence of N on carbon cycling behavior, nutrient pulse dynamics, and post-fire recovery. Our study determined that further exploration into estimating sagebrush canopy N concentrations from an airborne platform is warranted, despite remote sensing challenges inherent to open canopy systems. Hyperspectral data transformed using standard derivative analysis were capable of quantifying sagebrush canopy N concentrations using partial least squares (PLS) regression with an R2 value of 0.72 and an R2 predicted value of 0.42 (n = 35). Subsetting the dataset to minimize the influence of bare ground (n = 19) increased R2 to 0.95 (R2 predicted = 0.56). Ground-based estimates of canopy N using leaf mass per unit area measurements (LMA) yielded consistently better model fits than ground-based estimates of canopy N using cover and height measurements. The LMA approach is likely a method that could be extended to other semiarid shrublands. Overall, the results of this study are encouraging for future landscape scale N estimates and represent an important step in addressing the confounding influence of bare ground, which we found to be a major influence on predictions of sagebrush canopy N from an airborne platform.

  4. Patagonian red wines: selection of Lactobacillus plantarum isolates as potential starter cultures for malolactic fermentation.

    Science.gov (United States)

    Bravo-Ferrada, Bárbara Mercedes; Hollmann, Axel; Delfederico, Lucrecia; Valdés La Hens, Danay; Caballero, Adriana; Semorile, Liliana

    2013-09-01

    The aim of this study was to evaluate fifty-three Lactobacillus plantarum isolates obtained from a Patagonian red wine, molecularly identified and typified using RAPD analysis, in order to select starter cultures for malolactic fermentation (MLF). The results obtained suggest a considerable genetic diversity, taking into account that all L. plantarum isolates were obtained from one cellar and one vintage. Based on the capacity to tolerate a concentration of 14 % ethanol in MRS broth for 2 days, eight isolates were selected for the subsequent analysis. The incidence of various wine stress factors (ethanol, acid pH, lysozyme and sulfur dioxide) on isolates growth was studied. Besides, glucosidase and tannase activities were evaluated, and the presence of genes involved in the synthesis of biogenic amines was examined by PCR. A previously characterized indigenous Oenococcus oeni strain was included with comparative purposes. Differences in technologically relevant characteristics were observed among the eight L. plantarum selected isolates, revealing an isolate-dependent behavior. Detectable glucosidase and tannase activities were found in all isolates. The presence of genes encoding histidine and tyrosine descarboxylases and putrescine carbamoyltransferase was not detected. The ability of L. plantarum isolates to grow and consume L-malic acid in simulated laboratory-scale vinifications revealed that two of them could be considered as possible MLF starter cultures for Patagonian red wines. These isolates will be subjected to further analysis, for a final winery technological characterization.

  5. Modeling directional thermal radiance from a forest canopy

    International Nuclear Information System (INIS)

    McGuire, M.J.; Balick, L.K.; Smith, J.A.; Hutchison, B.A.

    1989-01-01

    Recent advances in remote sensing technology have increased interest in utilizing the thermal-infared region to gain additional information about surface features such as vegetation canopies. Studies have shown that sensor view angle, canopy structure, and percentage of canopy coverage can affect the response of a thermal sensor. These studies have been primarily of agricultural regions and there have been relatively few examples describing the thermal characteristics of forested regions. This paper describes an extension of an existing thermal vegetation canopy radiance model which has been modified to partially account for the geometrically rough structure of a forest canopy. Fourier series expansion of a canopy height profile is used to calculate improved view factors which partially account for the directional variations in canopy thermal radiance transfers. The original and updated radiance model predictions are compared with experimental data obtained over a deciduous (oak-hickory) forest site. The experimental observations are also used to document azimuthal and nadir directional radiance variations. Maximum angular variations in measured canopy temperatures were 4–6°C (azimuth) and 2.5°C (nadir). Maximum angular variations in simulated temperatures using the modified rough surface model was 4°C. The rough surface model appeared to be sensitive to large gaps in the canopy height profile, which influenced the resultant predicted temperature. (author)

  6. Andean Condor (Vultur gryphus) in Ecuador: Geographic Distribution, Population Size and Extinction Risk.

    Science.gov (United States)

    Naveda-Rodríguez, Adrián; Vargas, Félix Hernán; Kohn, Sebastián; Zapata-Ríos, Galo

    2016-01-01

    The Andean Condor (Vultur gryphus) in Ecuador is classified as Critically Endangered. Before 2015, standardized and systematic estimates of geographic distribution, population size and structure were not available for this species, hampering the assessment of its current status and hindering the design and implementation of effective conservation actions. In this study, we performed the first quantitative assessment of geographic distribution, population size and population viability of Andean Condor in Ecuador. We used a methodological approach that included an ecological niche model to study geographic distribution, a simultaneous survey of 70 roosting sites to estimate population size and a population viability analysis (PVA) for the next 100 years. Geographic distribution in the form of extent of occurrence was 49 725 km2. During a two-day census, 93 Andean Condors were recorded and a population of 94 to 102 individuals was estimated. In this population, adult-to-immature ratio was 1:0.5. In the modeled PVA scenarios, the probability of extinction, mean time to extinction and minimum population size varied from zero to 100%, 63 years and 193 individuals, respectively. Habitat loss is the greatest threat to the conservation of Andean Condor populations in Ecuador. Population size reduction in scenarios that included habitat loss began within the first 15 years of this threat. Population reinforcement had no effects on the recovery of Andean Condor populations given the current status of the species in Ecuador. The population size estimate presented in this study is the lower than those reported previously in other countries where the species occur. The inferences derived from the population viability analysis have implications for Condor management in Ecuador. This study highlights the need to redirect efforts from captive breeding and population reinforcement to habitat conservation.

  7. Neogene stratigraphy and Andean geodynamics of southern Ecuador

    Science.gov (United States)

    Hungerbühler, Dominik; Steinmann, Michael; Winkler, Wilfried; Seward, Diane; Egüez, Arturo; Peterson, Dawn E.; Helg, Urs; Hammer, Cliff

    2002-01-01

    The present paper reviews Tertiary volcanic and sedimentary formations in the Inter-Andean region of southern Ecuador (between 2°S and 4°20'S) in order to develop a geodynamic model of the region. The formations occur in the southern shallow prolongation of the Inter-Andean Valley between the Cordillera Real to the east, and the Cordillera Occidental and Amotape-Tahuín Provinces to the west. One hundred fifty zircon fission-track analyses has established a detailed chronostratigraphy for the sedimentary and volcanic formations and several small intrusions. The Paleogene to early Miocene formations are dominated by intermediate and acidic volcanic and pyroclastic rocks. In addition, relics of Eocene continental sedimentary series have been identified. The Neogene sedimentary series lie unconformably on deformed and eroded metamorphic, sedimentary and volcanic formations. They were deposited in two stages, which are separated by a major unconformity dated at ≈10-9 Ma. (1) During the middle and early late Miocene (≈15-10 Ma) marginal marine deltaic, lagoonal, lacustrine and fluvial environments prevailed, which we group under the heading "Pacific Coastal sequences". They presumably covered a greater surface area in southern Ecuador than their present occurrence in small topographic depressions. We suggest that they were deposited in the shallow marine Cuenca and Loja Embayments. Deposition in a marginal marine environment is also supported by the occurrence of brackish water ostracods and other fauna. (2) Above the regional (angular) unconformity, the coastal facies are overlain by late Miocene (≈9-5 Ma) continental alluvial fan and fluvial facies which are in turn covered by mainly airborne volcanic material. They represent the "Intermontane sequences" of the basins of Cuenca, Girón-Santa Isabel, Nabón, Loja and Malacatos-Vilcabamba. Sedimentologic and stratigraphic results are used to discuss the tectonic setting of Neogene sedimentation in the forearc

  8. Contrasting patterns of Andean diversification among three diverse clades of Neotropical clearwing butterflies.

    Science.gov (United States)

    Chazot, Nicolas; De-Silva, Donna Lisa; Willmott, Keith R; Freitas, André V L; Lamas, Gerardo; Mallet, James; Giraldo, Carlos E; Uribe, Sandra; Elias, Marianne

    2018-04-01

    The Neotropical region is the most biodiverse on Earth, in a large part due to the highly diverse tropical Andean biota. The Andes are a potentially important driver of diversification within the mountains and for neighboring regions. We compared the role of the Andes in diversification among three subtribes of Ithomiini butterflies endemic to the Neotropics, Dircennina, Oleriina, and Godyridina. The diversification patterns of Godyridina have been studied previously. Here, we generate the first time-calibrated phylogeny for the largest ithomiine subtribe, Dircennina, and we reanalyze a published phylogeny of Oleriina to test different biogeographic scenarios involving the Andes within an identical framework. We found common diversification patterns across the three subtribes, as well as major differences. In Dircennina and Oleriina, our results reveal a congruent pattern of diversification related to the Andes with an Andean origin, which contrasts with the Amazonian origin and multiple Andean colonizations of Godyridina. In each of the three subtribes, a clade diversified in the Northern Andes at a faster rate. Diversification within Amazonia occurred in Oleriina and Godyridina, while virtually no speciation occurred in Dircennina in this region. Dircennina was therefore characterized by higher diversification rates within the Andes compared to non-Andean regions, while in Oleriina and Godyridina, we found no difference between these regions. Our results and discussion highlight the importance of comparative approaches in biogeographic studies.

  9. Long term diet differences between morphs in trophically polymorphic Percichthys trucha (Pisces : Percichthyidae) populations from the southern Andes

    DEFF Research Database (Denmark)

    Logan, M.S.; Iverson, S.J.; Ruzzante, D.E.

    2000-01-01

    in resource use by two recently described sympatric morphs of Perichthys trucha, a common freshwater fish of the Andean and Patagonian regions of South America. Because dietary fatty acids are often stored in carnivorous animals with little modification after consumption, they can be used to infer information...... that certain fatty acids were correlated with diet as determined by gut content analysis. Consumption of anisopteran larvae was highly correlated with 14:0 in adipose and muscle tissue; and higher levels of longer chain unsaturated fatty acids (i.e. 20 and 22 carbons) were correlated with the presence of fish...... and also amphipods in the diets. Taken together, the results suggest that there are marked differences in the foraging ecology of the two morphs of P. trucha inhabiting southern Andean lakes. (C) 2000 The Linnean Society of London...

  10. Bone Canopies in Pediatric Renal Osteodystrophy

    DEFF Research Database (Denmark)

    Pereira, Renata C; Levin Andersen, Thomas; Friedman, Peter A

    2016-01-01

    Pediatric renal osteodystrophy (ROD) is characterized by changes in bone turnover, mineralization, and volume that are brought about by alterations in bone resorption and formation. The resorptive and formative surfaces on the cancellous bone are separated from the marrow cavity by canopies...... and their association with biochemical and bone histomorphometric parameters in 106 pediatric chronic kidney disease (CKD) patients (stage 2-5) across the spectrum of ROD. Canopies in CKD patients often appeared as thickened multilayered canopies, similar to previous reports in patients with primary hyperparathyroidism....... This finding contrasts with the thin appearance reported in healthy individuals with normal kidney function. Furthermore, canopies in pediatric CKD patients showed immunoreactivity to the PTH receptor (PTHR1) as well as to the receptor activator of nuclear factor kappa-B ligand (RANKL). The number of surfaces...

  11. Stream Response to an Extreme Defoliation Event

    Science.gov (United States)

    Gold, A.; Loffredo, J.; Addy, K.; Bernhardt, E. S.; Berdanier, A. B.; Schroth, A. W.; Inamdar, S. P.; Bowden, W. B.

    2017-12-01

    Extreme climatic events are known to profoundly impact stream flow and stream fluxes. These events can also exert controls on insect outbreaks, which may create marked changes in stream characteristics. The invasive Gypsy Moth (Lymantria dispar dispar) experiences episodic infestations based on extreme climatic conditions within the northeastern U.S. In most years, gypsy moth populations are kept in check by diseases. In 2016 - after successive years of unusually warm, dry spring and summer weather -gypsy moth caterpillars defoliated over half of Rhode Island's 160,000 forested ha. No defoliation of this magnitude had occurred for more than 30 years. We examined one RI headwater stream's response to the defoliation event in 2016 compared with comparable data in 2014 and 2015. Stream temperature and flow was gauged continuously by USGS and dissolved oxygen (DO) was measured with a YSI EXO2 sonde every 30 minutes during a series of deployments in the spring, summer and fall from 2014-2016. We used the single station, open channel method to estimate stream metabolism metrics. We also assessed local climate and stream temperature data from 2009-2016. We observed changes in stream responses during the defoliation event that suggest changes in ET, solar radiation and heat flux. Although the summer of 2016 had more drought stress (PDSI) than previous years, stream flow occurred throughout the summer, in contrast to several years with lower drought stress when stream flow ceased. Air temperature in 2016 was similar to prior years, but stream temperature was substantially higher than the prior seven years, likely due to the loss of canopy shading. DO declined dramatically in 2016 compared to prior years - more than the rising stream temperatures would indicate. Gross Primary Productivity was significantly higher during the year of the defoliation, indicating more total fixation of inorganic carbon from photo-autotrophs. In 2016, Ecosystem Respiration was also higher and Net

  12. Importance of terrestrial arthropods as subsidies in lowland Neotropical rain forest stream ecosystems

    Science.gov (United States)

    Small, Gaston E.; Torres, Pedro J.; Schwizer, Lauren M.; Duff, John H.; Pringle, Catherine M.

    2013-01-01

    The importance of terrestrial arthropods has been documented in temperate stream ecosystems, but little is known about the magnitude of these inputs in tropical streams. Terrestrial arthropods falling from the canopy of tropical forests may be an important subsidy to tropical stream food webs and could also represent an important flux of nitrogen (N) and phosphorus (P) in nutrient-poor headwater streams. We quantified input rates of terrestrial insects in eight streams draining lowland tropical wet forest in Costa Rica. In two focal headwater streams, we also measured capture efficiency by the fish assemblage and quantified terrestrially derived N- and P-excretion relative to stream nutrient uptake rates. Average input rates of terrestrial insects ranged from 5 to 41 mg dry mass/m2/d, exceeding previous measurements of aquatic invertebrate secondary production in these study streams, and were relatively consistent year-round, in contrast to values reported in temperate streams. Terrestrial insects accounted for half of the diet of the dominant fish species, Priapicthys annectens. Although terrestrially derived fish excretion was found to be a small flux relative to measured nutrient uptake rates in the focal streams, the efficient capture and processing of terrestrial arthropods by fish made these nutrients available to the local stream ecosystem. This aquatic-terrestrial linkage is likely being decoupled by deforestation in many tropical regions, with largely unknown but potentially important ecological consequences.

  13. Fluxes of trichloroacetic acid through a conifer forest canopy

    International Nuclear Information System (INIS)

    Stidson, R.T.; Heal, K.V.; Dickey, C.A.; Cape, J.N.; Heal, M.R.

    2004-01-01

    Controlled-dosing experiments with conifer seedlings have demonstrated an above-ground route of uptake for trichloroacetic acid (TCA) from aqueous solution into the canopy, in addition to uptake from the soil. The aim of this work was to investigate the loss of TCA to the canopy in a mature conifer forest exposed only to environmental concentrations of TCA by analysing above- and below-canopy fluxes of TCA and within-canopy instantaneous reservoir of TCA. Concentrations and fluxes of TCA were quantified for one year in dry deposition, rainwater, cloudwater, throughfall, stemflow and litterfall in a 37-year-old Sitka spruce and larch plantation in SW Scotland. Above-canopy TCA deposition was dominated by rainfall (86%), compared with cloudwater (13%) and dry deposition (1%). On average only 66% of the TCA deposition passed through the canopy in throughfall and stemflow (95% and 5%, respectively), compared with 47% of the wet precipitation depth. Consequently, throughfall concentration of TCA was, on average, ∼1.4 x rainwater concentration. There was no significant difference in below-canopy fluxes between Sitka spruce and larch, or at a forest-edge site. Annual TCA deposited from the canopy in litterfall was only ∼1-2% of above-canopy deposition. On average, ∼800 μg m -2 of deposited TCA was lost to the canopy per year, compared with estimates of above-ground TCA storage of ∼400 and ∼300 μg m -2 for Sitka spruce and larch, respectively. Taking into account likely uncertainties in these values (∼±50%), these data yield an estimate for the half-life of within-canopy elimination of TCA in the range 50-200 days, assuming steady-state conditions and that all TCA lost to the canopy is transferred into the canopy material, rather than degraded externally. The observations provide strong indication that an above-ground route is important for uptake of TCA specifically of atmospheric origin into mature forest canopies, as has been shown for seedlings (in

  14. Dispersal, isolation and diversification with continued gene flow in an Andean tropical dry forest.

    Science.gov (United States)

    Toby Pennington, R; Lavin, Matt

    2017-07-01

    The Andes are the world's longest mountain chain, and the tropical Andes are the world's richest biodiversity hot spot. The origin of the tropical Andean cordillera is relatively recent because the elevation of the mountains was relatively low (400-2500 m palaeoelevations) only 10 MYA with final uplift being rapid. These final phases of the Andean orogeny are thought to have had a fundamental role in shaping processes of biotic diversification and biogeography, with these effects reaching far from the mountains themselves by changing the course of rivers and deposition of mineral-rich Andean sediments across the massive Amazon basin. In a recent issue of Molecular Ecology, Oswald, Overcast, Mauck, Andersen, and Smith (2017) investigate the biogeography and diversification of bird species in the Andes of Peru and Ecuador. Their study is novel in its focus on tropical dry forests (Figure 1) rather than more mesic biomes such as rain forests, cloud forests and paramos, which tend to be the focus of science and conservation in the Andean hot spot. It is also able to draw powerful conclusions via the first deployment of genomic approaches to a biogeographic question in the threatened dry forests of the New World. © 2017 John Wiley & Sons Ltd.

  15. Sediment budget in the Ucayali River basin, an Andean tributary of the Amazon River

    Directory of Open Access Journals (Sweden)

    W. Santini

    2015-03-01

    Full Text Available Formation of mountain ranges results from complex coupling between lithospheric deformation, mechanisms linked to subduction and surface processes: weathering, erosion, and climate. Today, erosion of the eastern Andean cordillera and sub-Andean foothills supplies over 99% of the sediment load passing through the Amazon Basin. Denudation rates in the upper Ucayali basin are rapid, favoured by a marked seasonality in this region and extreme precipitation cells above sedimentary strata, uplifted during Neogene times by a still active sub-Andean tectonic thrust. Around 40% of those sediments are trapped in the Ucayali retro-foreland basin system. Recent advances in remote sensing for Amazonian large rivers now allow us to complete the ground hydrological data. In this work, we propose a first estimation of the erosion and sedimentation budget of the Ucayali River catchment, based on spatial and conventional HYBAM Observatory network.

  16. Maternal Knowledge and Use of Galactagogues in Andean Communities of Cusco, Peru

    Directory of Open Access Journals (Sweden)

    Madalena Monteban

    2017-09-01

    Full Text Available A commonly reported reason for early breastfeeding cessation is inadequate milk production. In response, women across the globe turn to galactagogues – substances used to increase the milk supply. Andean women have traditional knowledge about the medicinal and nutritional properties of plants and animals that are considered good to eat during breastfeeding. This research explores the maintenance and use of galactagogues, and specifically the use of the Andean flicker bird, within the wider framework of breastfeeding and nutrition policies in Peru. To elicit maternal knowledge and use of galactagogues, semi-structured and free-listing interviews were conducted with 33 mothers. Data analysis calculated the frequency and percentage of women reporting each type of galactagogue. In addition, thematic codes and relevant text passages were used in an iterative analytic process to document emerging themes. Identified galactagogues included five plants and six animals. Several galactagogues included protein-rich foods such as lamb meat and the Andean flicker bird. The use of protein-rich galactagogues as solid food is reinforced by public health messages. However, galactagogues in the research communities are usually consumed as soups or drinks, which are less rich in proteins than solid meals. The potential role of liquid galactagogues in the maintenance of appropriate hydration levels during breastfeeding in an environment where safe drinking water is scarce is a new contribution to the existing literature. The results are relevant to the design of maternal and child health policies that comply with intercultural health premises that value and respect the knowledge and practices of Andean Peoples.

  17. Uptake of small particles by tree canopies

    International Nuclear Information System (INIS)

    Belot, Y.; Camus, H.; Gauthier, D.; Caput, C.

    1992-01-01

    Most of the deposition data that are available to assess the radiological consequences of an accident have been acquired for low-growing vegetation and are inadapted to forest areas. Consequently, a programme was undertaken to study the deposition of particles on components of different trees and extrapolate the experimental data so obtained to large-scale canopies. The experiments were performed in a wind tunnel allowing canopy components to be exposed to a flow of suspended fluorescent particles of reasonably uniform size. Emphasis was put on particles in the 0.3-1.2 μm subrange, because most of the radioactive particles sampled at long distance from sources are comprised in this size interval. The uptake rates were determined for bare and leaf bearing twigs of several evergreen species (Picea abies, Pinus sylvestris and Quercus ilex), as a function of wind speed and particle size. The deposition rates obtained for the tree components were then used as input to a model that describes the uptake of particles by a large-scale canopy under specified conditions of weather and canopy structure. The model accounts for the diffusion of particles between different strata of the canopy, as well as deposition of particles on the canopy components. It calculates the rates of particle deposition to the horizontal surface of the canopy, and the repartition of the deposited particles within the canopy. Increases in wind speed cause increased deposition, but the effect is less important that it would have been for larger particles. The deposition is relatively insensitive to the size of particles within the subrange considered in this study. 13 refs., 2 figs., 1 tab

  18. Gainesville's urban forest canopy cover

    Science.gov (United States)

    Francisco Escobedo; Jennifer A. Seitz; Wayne Zipperer

    2009-01-01

    Ecosystem benefits from trees are linked directly to the amount of healthy urban forest canopy cover. Urban forest cover is dynamic and changes over time due to factors such as urban development, windstorms, tree removals, and growth. The amount of a city's canopy cover depends on its land use, climate, and people's preferences. This fact sheet examines how...

  19. Phenolic compounds as indicators of drought resistance in shrubs from Patagonian shrublands (Argentina).

    Science.gov (United States)

    Varela, M Celeste; Arslan, Idris; Reginato, Mariana A; Cenzano, Ana M; Luna, M Virginia

    2016-07-01

    Plants exposed to drought stress, as usually occurs in Patagonian shrublands, have developed different strategies to avoid or tolerate the lack of water during their development. Production of phenolic compounds (or polyphenols) is one of the strategies used by some native species of adverse environments to avoid the oxidative damage caused by drought. In the present study the relationship between phenolic compounds content, water availability and oxidative damage were evaluated in two native shrubs: Larrea divaricata (evergreen) and Lycium chilense (deciduous) of Patagonian shrublands by their means and/or by multivariate analysis. Samples of both species were collected during the 4 seasons for the term of 1 year. Soil water content, relative water content, total phenols, flavonoids, flavonols, tartaric acid esters, flavan-3-ols, proanthocyanidins, antioxidant capacity and lipid peroxidation were measured. According to statistical univariate analysis, L. divaricata showed high production of polyphenols along the year, with a phenolic compound synthesis enhanced during autumn (season of greatest drought), while L. chilense has lower production of these compounds without variation between seasons. The variation in total phenols along the seasons is proportional to the antioxidant capacity and inversely proportional to lipid peroxidation. Multivariate analysis showed that, regardless their mechanism to face drought (avoidance or tolerance), both shrubs are well adapted to semi-arid regions and the phenolic compounds production is a strategy used by these species living in extreme environments. The identification of polyphenol compounds showed that L. divaricata produces different types of flavonoids, particularly bond with sugars, while L. chilense produces high amount of non-flavonoids compounds. These results suggest that flavonoid production and accumulation could be a useful indicator of drought tolerance in native species. Copyright © 2016 Elsevier Masson

  20. Native and exotic fishes in a Patagonian reservoir with rainbow trout cage culture: spatial and trophic resource use

    Directory of Open Access Journals (Sweden)

    Nabaes Jodar Diego N.

    2017-01-01

    Full Text Available Although the interactions of exotic salmonids with native Patagonian fishes are well known, little is known about the ecology and impact of farmed fish escapees. Salmonid production in Argentina is largely concentrated in the Alicurá reservoir in north Patagonia, where fish community studies have been scarce. Here, we assess and compare the spatial distribution, body size–condition and diet of the different fish species in this reservoir. Strong vertical segregation was observed between exotic rainbow trout Oncorhynchus mykiss (both escapees and wild, dominating the littoral zone, and native Percichthys trucha which dominate the medium and deep strata. Low piscivory–benthivory and high zooplanktivory were observed for rainbow trout, both traits being uncommon at a regional scale. Escaped farmed rainbow trout (ERT diet included abundant indigestible items along with wild prey. Higher body condition of P. trucha close to farms, as well as the regionally unprecedented high incidence of Daphnia sp. in the guts of all the species suggest that farm nutrient discharges have had significant impacts. Finally, the high body condition of ERT, together with their wild food diet and the long dispersal distance observed, demonstrate post-escape success, drawing our attention to potential upstream dispersion affecting the biodiversity and fisheries of Patagonian rivers and lakes.

  1. Andean shrublands of Moquegua, South Peru: Prepuna plant communities

    NARCIS (Netherlands)

    Montesinos, D.B.; Cleef, A.M.; Sykora, K.V.

    2012-01-01

    A syntaxonomic overview of shrubland vegetation in the southern Andean regions of Peru is presented. For each plant community, information is given on physiognomy, floristic diversity, ecology and geographical distribution. The shrub vegetation on the slopes of the upper Tambo river valley includes

  2. Canopy wake measurements using multiple scanning wind LiDARs

    Science.gov (United States)

    Markfort, C. D.; Carbajo Fuertes, F.; Iungo, V.; Stefan, H. G.; Porte-Agel, F.

    2014-12-01

    Canopy wakes have been shown, in controlled wind tunnel experiments, to significantly affect the fluxes of momentum, heat and other scalars at the land and water surface over distances of ˜O(1 km), see Markfort et al. (EFM, 2013). However, there are currently no measurements of the velocity field downwind of a full-scale forest canopy. Point-based anemometer measurements of wake turbulence provide limited insight into the extent and details of the wake structure, whereas scanning Doppler wind LiDARs can provide information on how the wake evolves in space and varies over time. For the first time, we present measurements of the velocity field in the wake of a tall patch of forest canopy. The patch consists of two uniform rows of 40-meter tall deciduous, plane trees, which border either side of the Allée de Dorigny, near the EPFL campus. The canopy is approximately 250 m long, and it is approximately 40 m wide, along the direction of the wind. A challenge faced while making field measurements is that the wind rarely intersects a canopy normal to the edge. The resulting wake flow may be deflected relative to the mean inflow. Using multiple LiDARs, we measure the evolution of the wake due to an oblique wind blowing over the canopy. One LiDAR is positioned directly downwind of the canopy to measure the flow along the mean wind direction and the other is positioned near the canopy to evaluate the transversal component of the wind and how it varies with downwind distance from the canopy. Preliminary results show that the open trunk space near the base of the canopy results in a surface jet that can be detected just downwind of the canopy and farther downwind dissipates as it mixes with the wake flow above. A time-varying recirculation zone can be detected by the periodic reversal of the velocity near the surface, downwind of the canopy. The implications of canopy wakes for measurement and modeling of surface fluxes will be discussed.

  3. The Gondwana Orogeny in northern North Patagonian Massif: Evidences from the Caita Có granite, La Seña and Pangaré mylonites, Argentina

    Directory of Open Access Journals (Sweden)

    Daniel A. Gregori

    2016-07-01

    Full Text Available Structural analyses in the northern part of the North Patagonia Massif, in the foliated Caita Có granite and in La Seña and Pangaré mylonites, indicate that the pluton was intruded as a sheet-like body into an opening pull-apart structure during the Gondwana Orogeny. Geochronological studies in the massif indicate a first, lower to middle Permian stage of regional deformation, related to movements during indentation tectonics, with emplacement of foliated granites in the western and central areas of the North Patagonian Massif. Between the upper Permian and lower Triassic, evidence indicates emplacement of undeformed granitic bodies in the central part of the North Patagonian Massif. A second pulse of deformation between the middle and upper Triassic is related to the emplacement of the Caita Có granite, the development of mylonitic belts, and the opening of the Los Menucos Basin. During this pulse of deformation, compression direction was from the eastern quadrant.

  4. Synergistic roles of climate warming and human occupation in Patagonian megafaunal extinctions during the Last Deglaciation

    Science.gov (United States)

    Metcalf, Jessica L.; Turney, Chris; Barnett, Ross; Martin, Fabiana; Bray, Sarah C.; Vilstrup, Julia T.; Orlando, Ludovic; Salas-Gismondi, Rodolfo; Loponte, Daniel; Medina, Matías; De Nigris, Mariana; Civalero, Teresa; Fernández, Pablo Marcelo; Gasco, Alejandra; Duran, Victor; Seymour, Kevin L.; Otaola, Clara; Gil, Adolfo; Paunero, Rafael; Prevosti, Francisco J.; Bradshaw, Corey J. A.; Wheeler, Jane C.; Borrero, Luis; Austin, Jeremy J.; Cooper, Alan

    2016-01-01

    The causes of Late Pleistocene megafaunal extinctions (60,000 to 11,650 years ago, hereafter 60 to 11.65 ka) remain contentious, with major phases coinciding with both human arrival and climate change around the world. The Americas provide a unique opportunity to disentangle these factors as human colonization took place over a narrow time frame (~15 to 14.6 ka) but during contrasting temperature trends across each continent. Unfortunately, limited data sets in South America have so far precluded detailed comparison. We analyze genetic and radiocarbon data from 89 and 71 Patagonian megafaunal bones, respectively, more than doubling the high-quality Pleistocene megafaunal radiocarbon data sets from the region. We identify a narrow megafaunal extinction phase 12,280 ± 110 years ago, some 1 to 3 thousand years after initial human presence in the area. Although humans arrived immediately prior to a cold phase, the Antarctic Cold Reversal stadial, megafaunal extinctions did not occur until the stadial finished and the subsequent warming phase commenced some 1 to 3 thousand years later. The increased resolution provided by the Patagonian material reveals that the sequence of climate and extinction events in North and South America were temporally inverted, but in both cases, megafaunal extinctions did not occur until human presence and climate warming coincided. Overall, metapopulation processes involving subpopulation connectivity on a continental scale appear to have been critical for megafaunal species survival of both climate change and human impacts. PMID:27386563

  5. Watershed Land Use and Seasonal Variation Constrain the Influence of Riparian Canopy Cover on Stream Ecosystem Metabolism

    Science.gov (United States)

    While watershed and local scale controls on stream metabolism have been independently investigated, little is known about how controls exerted at these different scales interact to determine stream metabolic rates, or how these interactions vary across seasons. To address this ...

  6. Interrill and rill erodibility in the northern andean highlands

    NARCIS (Netherlands)

    Romero, C.; Stroosnijder, L.; Baigorria, G.A.

    2007-01-01

    There is a lack of quantitative information describing the physical processes causing soil erosion in the Andean Highlands, especially those related to interrill and rill erodibility factors. To assess how susceptible are soils to erosion in this region, field measurements of interrill (Ki) and rill

  7. Canopy Chemistry (OTTER)

    Data.gov (United States)

    National Aeronautics and Space Administration — ABSTRACT: Canopy characteristics: leaf chemistry, specific leaf area, LAI, PAR, IPAR, NPP, standing biomass--see also: Meteorology (OTTER) for associated...

  8. Delineating priority habitat areas for the conservation of Andean bears in northern Ecuador

    Science.gov (United States)

    Peralvo, M.F.; Cuesta, F.; Van Manen, F.

    2005-01-01

    We sought to identify priority areas for the conservation of Andean bear (Tremarctos ornatus) habitat in the northern portion of the eastern Andean cordillera in Ecuador. The study area included pa??ramo and montane forest habitats within the Antisana and Cayambe-Coca ecological reserves, and unprotected areas north of these reserves with elevations ranging from 1,800 to 4,300 m. We collected data on bear occurrence along 53 transects during 2000-01 in the Oyacachi River basin, an area of indigenous communities within the Cayambe-Coca Ecological Reserve. We used those data and a set of 7 environmental variables to predict suitability of Andean bear habitat using Mahalanobis distance, a multivariate measure of dissimilarity. The Mahalanobis distance values were classified into 5 classes of habitat suitability and generalized to a resolution of 1,650-m ?? 1,650-m grid cells. Clusters of grid cells with high suitability values were delineated from the generalized model and denned as important habitat areas (IHAs) for conservation. The IHAs were ranked using a weighted index that included factors of elevation range, influence from disturbed areas, and current conservation status. We identified 12 IHAs, which were mainly associated with pa??ramo and cloud forest habitats; 2 of these areas have high conservation priorities because they are outside existing reserves and close to areas of human pressure. The distribution of the IHAs highlighted the role of human land use as the main source of fragmentation of Andean bear habitat in this region, emphasizing the importance of preserving habitat connectivity to allow the seasonal movements among habitat types that we documented for this species. Furthermore, the existence of areas with high habitat suitability close to areas of intense human use indicates the importance of bear-human conflict management as a critical Andean bear conservation strategy. We suggest that a promising conservation opportunity for this species is

  9. Wing pattern variation in the Patagonian biting midge, Forcipomyia (Forcipomyia multipicta Ingram & Macfie (Diptera, Ceratopogonidae

    Directory of Open Access Journals (Sweden)

    Gustavo R. SPINELLI

    2012-01-01

    Full Text Available Examination of the type-series and non-type specimens of the Patagonian biting midge, Forcipomyia (Forcipomyia multipicta Ingram & Macfie (Diptera: Ceratopogonidae, revealed considerable variation in wing patterns of both sexes. One pattern includes several distinct light spot areas, whereas another pattern (e.g, in the holotype only features marginal light spots in cell r3, while other light spots are barely perceptible or absent. The cause(s of the differential lack of dark macrotrichia in certain areas of the wing membrane in specimens of some series could not be attributed either to their age, sex, or method of preservation.

  10. Captivity Shapes the Gut Microbiota of Andean Bears: Insights into Health Surveillance

    Directory of Open Access Journals (Sweden)

    Andrea Borbón-García

    2017-07-01

    Full Text Available The Andean bear is an endemic species of the tropical Andes who has an almost exclusively plant-based diet. Since herbivorous mammals do not carry enzymes for fiber degradation, the establishment of symbiosis with cellulolytic microorganisms in their gastrointestinal (GI tract is necessary to help them fulfill their nutritional needs. Furthermore, as described for other mammals, a stable, diverse, and balanced gut microbial composition is an indicator of a healthy status of the host; under disturbances this balance can be lost, leading to potential diseases of the host. The goal of this study was to describe the gut microbiota of wild and captive Andean bears and determine how habitat status influences the composition and diversity of the gut symbiotic community. Fecal samples from wild (n = 28 and captive (n = 8 Andean bears were collected in “Reserva Pantano de Martos” and “Fundación Bioandina”, Colombia. Composition and diversity analyses were performed using amplicons from the V4 region of the 16S rDNA gene sequenced using the Ion PGM platform. PICRUSt algorithm was applied to predict the gene content of the gut microbiome of wild and captive Andean bears. A total of 5,411 and 838 OTUs were identified for wild and captive bears, respectively. Captive bears contained a lower number of bacterial phyla (n = 7 compared to wild individuals (n = 9. Proteobacteria (59.03% and Firmicutes (14.03% were the phyla that contributed the most to differences between wild and captive bears (overall dissimilarity = 87.72%. At family level, Enterobacteriaceae drove the main differences between the two groups (13.7%. PICRUSt metagenomics predictions suggested a similar pattern of relative abundance of gene families associated with the metabolism of carbohydrates across samples in wild individuals, despite the taxonomic differences of their gut microbiota. Captivity alters the availability and diversity of food resources, which likely reduces microbiota

  11. Deploying Fourier Coefficients to Unravel Soybean Canopy Diversity.

    Science.gov (United States)

    Jubery, Talukder Z; Shook, Johnathon; Parmley, Kyle; Zhang, Jiaoping; Naik, Hsiang S; Higgins, Race; Sarkar, Soumik; Singh, Arti; Singh, Asheesh K; Ganapathysubramanian, Baskar

    2016-01-01

    Soybean canopy outline is an important trait used to understand light interception ability, canopy closure rates, row spacing response, which in turn affects crop growth and yield, and directly impacts weed species germination and emergence. In this manuscript, we utilize a methodology that constructs geometric measures of the soybean canopy outline from digital images of canopies, allowing visualization of the genetic diversity as well as a rigorous quantification of shape parameters. Our choice of data analysis approach is partially dictated by the need to efficiently store and analyze large datasets, especially in the context of planned high-throughput phenotyping experiments to capture time evolution of canopy outline which will produce very large datasets. Using the Elliptical Fourier Transformation (EFT) and Fourier Descriptors (EFD), canopy outlines of 446 soybean plant introduction (PI) lines from 25 different countries exhibiting a wide variety of maturity, seed weight, and stem termination were investigated in a field experiment planted as a randomized complete block design with up to four replications. Canopy outlines were extracted from digital images, and subsequently chain coded, and expanded into a shape spectrum by obtaining the Fourier coefficients/descriptors. These coefficients successfully reconstruct the canopy outline, and were used to measure traditional morphometric traits. Highest phenotypic diversity was observed for roundness, while solidity showed the lowest diversity across all countries. Some PI lines had extraordinary shape diversity in solidity. For interpretation and visualization of the complexity in shape, Principal Component Analysis (PCA) was performed on the EFD. PI lines were grouped in terms of origins, maturity index, seed weight, and stem termination index. No significant pattern or similarity was observed among the groups; although interestingly when genetic marker data was used for the PCA, patterns similar to canopy

  12. Eastern Andean environmental and climate synthesis for the last 2000 years BP from terrestrial pollen and charcoal records of Patagonia

    Science.gov (United States)

    Sottile, G. D.; Echeverria, M. E.; Mancini, M. V.; Bianchi, M. M.; Marcos, M. A.; Bamonte, F. P.

    2015-06-01

    The Southern Hemisphere Westerly Winds (SWW) constitute an important zonal circulation system that dominates the dynamics of Southern Hemisphere mid-latitude climate. Little is known about climatic changes in the Southern South America in comparison to the Northern Hemisphere due to the low density of proxy records, and adequate chronology and sampling resolution to address environmental changes of the last 2000 years. Since 2009, new pollen and charcoal records from bog and lakes in northern and southern Patagonia at the east side of the Andes have been published with an adequate calibration of pollen assemblages related to modern vegetation and ecological behaviour. In this work we improve the chronological control of some eastern Andean previously published sequences and integrate pollen and charcoal dataset available east of the Andes to interpret possible environmental and SWW variability at centennial time scales. Through the analysis of modern and past hydric balance dynamics we compare these scenarios with other western Andean SWW sensitive proxy records for the last 2000 years. Due to the distinct precipitation regimes that exist between Northern (40-45° S) and Southern Patagonia (48-52° S) pollen sites locations, shifts on latitudinal and strength of the SWW results in large changes on hydric availability on forest and steppe communities. Therefore, we can interpret fossil pollen dataset as changes on paleohydric balance at every single site by the construction of paleohydric indices and comparison to charcoal records during the last 2000 cal yrs BP. Our composite pollen-based Northern and Southern Patagonia indices can be interpreted as changes in latitudinal variation and intensity of the SWW respectively. Dataset integration suggest poleward SWW between 2000 and 750 cal yrs BP and northward-weaker SWW during the Little Ice Age (750-200 cal yrs BP). These SWW variations are synchronous to Patagonian fire activity major shifts. We found an in phase

  13. Changing Hydrology in Glacier-fed High Altitude Andean Peatbogs

    Science.gov (United States)

    Slayback, D. A.; Yager, K.; Baraer, M.; Mohr, K. I.; Argollo, J.; Wigmore, O.; Meneses, R. I.; Mark, B. G.

    2012-12-01

    Montane peatbogs in the glacierized Andean highlands of Peru and Bolivia provide critical forage for camelids (llama and alpaca) in regionally extensive pastoral agriculture systems. During the long dry season, these wetlands often provide the only available green forage. A key question for the future of these peatbog systems, and the livelihoods they support, is the impact of climate change and glacier recession on their hydrology, and thus forage production. We have already documented substantial regional glacier recession, of, on average, approximately 30% of surface area over the past two decades. As glaciers begin to retreat under climate change, there is initially a period of increased meltwater outflow, culminating in a period of "peak water", and followed by a continual decline in outflows. Based on previous work, we know that some glaciers in the region have already passed peak water conditions, and are now declining. To better understand the impacts of these processes on peatbog hydrology and productivity, we have begun collecting a variety of surface data at several study sites in both Bolivia and Peru. These include precipitation, stream flow, water levels, water chemistry and isotope analyses, and peatbog biodiversity and biomass. These measurements will be used in conjunction with a regional model driven by satellite data to predict likely future impacts. We will present the results from these initial surface measurements, and an overview of satellite datasets to be used in the regional model.

  14. Surname-inferred Andean ancestry is associated with child stature and limb lengths at high altitude in Peru, but not at sea level.

    Science.gov (United States)

    Pomeroy, Emma; Wells, Jonathan C K; Stanojevic, Sanja; Miranda, J Jaime; Moore, Lorna G; Cole, Tim J; Stock, Jay T

    2015-01-01

    Native Andean ancestry gives partial protection from reduced birthweight at high altitude in the Andes compared with European ancestry. Whether Andean ancestry is also associated with body proportions and greater postnatal body size at altitude is unknown. Therefore, we tested whether a greater proportion of Andean ancestry is associated with stature and body proportions among Peruvian children at high and low altitude. Height, head circumference, head-trunk height, upper and lower limb lengths, and tibia, ulna, hand and foot lengths, were measured in 133 highland and 169 lowland children aged 6 months to 8.5 years. For highland and lowland groups separately, age-sex-adjusted anthropometry z scores were regressed on the number of indigenous parental surnames as a proxy for Andean ancestry, adjusting for potential confounders (maternal age and education, parity, altitude [highlands only]). Among highland children, greater Andean ancestry was negatively associated with stature and tibia, ulna, and lower limb lengths, independent of negative associations with greater altitude for these measurements. Relationships were strongest for tibia length: each additional Andean surname or 1,000 m increase at altitude among highland children was associated with 0.18 and 0.65 z score decreases in tibia length, respectively. Anthropometry was not significantly associated with ancestry among lowland children. Greater Andean ancestry is associated with shorter stature and limb measurements at high but not low altitude. Gene-environment interactions between high altitude and Andean ancestry may exacerbate the trade-off between chest dimensions and stature that was proposed previously, though we could not test this directly. © 2015 Wiley Periodicals, Inc.

  15. Smartphone based hemispherical photography for canopy structure measurement

    Science.gov (United States)

    Wan, Xuefen; Cui, Jian; Jiang, Xueqin; Zhang, Jingwen; Yang, Yi; Zheng, Tao

    2018-01-01

    The canopy is the most direct and active interface layer of the interaction between plant and environment, and has important influence on energy exchange, biodiversity, ecosystem matter and climate change. The measurement about canopy structure of plant is an important foundation to analyze the pattern, process and operation mechanism of forest ecosystem. Through the study of canopy structure of plant, solar radiation, ambient wind speed, air temperature and humidity, soil evaporation, soil temperature and other forest environmental climate characteristics can be evaluated. Because of its accuracy and effectiveness, canopy structure measurement based on hemispherical photography has been widely studied. However, the traditional method of canopy structure hemispherical photogrammetry based on SLR camera and fisheye lens. This method is expensive and difficult to be used in some low-cost occasions. In recent years, smartphone technology has been developing rapidly. The smartphone not only has excellent image acquisition ability, but also has the considerable computational processing ability. In addition, the gyroscope and positioning function on the smartphone will also help to measure the structure of the canopy. In this paper, we present a smartphone based hemispherical photography system. The system consists of smart phones, low-cost fisheye lenses and PMMA adapters. We designed an Android based App to obtain the canopy hemisphere images through low-cost fisheye lenses and provide horizontal collimation information. In addition, the App will add the acquisition location tag obtained by GPS and auxiliary positioning method in hemisphere image information after the canopy structure hemisphere image acquisition. The system was tested in the urban forest after it was completed. The test results show that the smartphone based hemispherical photography system can effectively collect the high-resolution canopy structure image of the plant.

  16. Constraints on deformation of the Southern Andes since the Cretaceous from anisotropy of magnetic susceptibility

    Science.gov (United States)

    Maffione, Marco; Hernandez-Moreno, Catalina; Ghiglione, Matias C.; Speranza, Fabio; van Hinsbergen, Douwe J. J.; Lodolo, Emanuele

    2015-12-01

    The southernmost segment of the Andean Cordillera underwent a complex deformation history characterized by alternation of contractional, extensional, and strike-slip tectonics. Key elements of southern Andean deformation that remain poorly constrained, include the origin of the orogenic bend known as the Patagonian Orocline (here renamed as Patagonian Arc), and the exhumation mechanism of an upper amphibolite facies metamorphic complex currently exposed in Cordillera Darwin. Here, we present results of anisotropy of magnetic susceptibility (AMS) from 22 sites in Upper Cretaceous to upper Eocene sedimentary rocks within the internal structural domain of the Magallanes fold-and-thrust belt in Tierra del Fuego (Argentina). AMS parameters from most sites reveal a weak tectonic overprint of the original magnetic fabric, which was likely acquired upon layer-parallel shortening soon after sedimentation. Magnetic lineation from 17 sites is interpreted to have formed during compressive tectonic phases associated to a continuous N-S contraction. Our data, combined with the existing AMS database from adjacent areas, show that the Early Cretaceous-late Oligocene tectonic phases in the Southern Andes yielded continuous contraction, variable from E-W in the Patagonian Andes to N-S in the Fuegian Andes, which defined a radial strain field. A direct implication is that the exhumation of the Cordillera Darwin metamorphic complex occurred under compressive, rather than extensional or strike-slip tectonics, as alternatively proposed. If we agree with recent works considering the curved Magallanes fold-and-thrust belt as a primary arc (i.e., no relative vertical-axis rotation of the limbs occurs during its formation), then other mechanisms different from oroclinal bending should be invoked to explain the documented radial strain field. We tentatively propose a kinematic model in which reactivation of variably oriented Jurassic faults at the South American continental margin controlled

  17. Canopy soil bacterial communities altered by severing host tree limbs

    Directory of Open Access Journals (Sweden)

    Cody R. Dangerfield

    2017-09-01

    Full Text Available Trees of temperate rainforests host a large biomass of epiphytic plants, which are associated with soils formed in the forest canopy. Falling of epiphytic material results in the transfer of carbon and nutrients from the canopy to the forest floor. This study provides the first characterization of bacterial communities in canopy soils enabled by high-depth environmental sequencing of 16S rRNA genes. Canopy soil included many of the same major taxonomic groups of Bacteria that are also found in ground soil, but canopy bacterial communities were lower in diversity and contained different operational taxonomic units. A field experiment was conducted with epiphytic material from six Acer macrophyllum trees in Olympic National Park, Washington, USA to document changes in the bacterial communities of soils associated with epiphytic material that falls to the forest floor. Bacterial diversity and composition of canopy soil was highly similar, but not identical, to adjacent ground soil two years after transfer to the forest floor, indicating that canopy bacteria are almost, but not completely, replaced by ground soil bacteria. Furthermore, soil associated with epiphytic material on branches that were severed from the host tree and suspended in the canopy contained altered bacterial communities that were distinct from those in canopy material moved to the forest floor. Therefore, the unique nature of canopy soil bacteria is determined in part by the host tree and not only by the physical environmental conditions associated with the canopy. Connection to the living tree appears to be a key feature of the canopy habitat. These results represent an initial survey of bacterial diversity of the canopy and provide a foundation upon which future studies can more fully investigate the ecological and evolutionary dynamics of these communities.

  18. Leaf Wetness within a Lily Canopy

    NARCIS (Netherlands)

    Jacobs, A.F.G.; Heusinkveld, B.G.; Klok, E.J.

    2005-01-01

    A wetness duration experiment was carried out within a lily field situated adjacent to coastal dunes in the Netherlands. A within-canopy model was applied to simulate leaf wetness in three layers, with equal leaf area indices, within the canopy. This simulation model is an extension of an existing

  19. Modeling percent tree canopy cover: a pilot study

    Science.gov (United States)

    John W. Coulston; Gretchen G. Moisen; Barry T. Wilson; Mark V. Finco; Warren B. Cohen; C. Kenneth Brewer

    2012-01-01

    Tree canopy cover is a fundamental component of the landscape, and the amount of cover influences fire behavior, air pollution mitigation, and carbon storage. As such, efforts to empirically model percent tree canopy cover across the United States are a critical area of research. The 2001 national-scale canopy cover modeling and mapping effort was completed in 2006,...

  20. Forest canopy water fluxes can be estimated using canopy structure metrics derived from airborne light detection and ranging (LiDAR)

    DEFF Research Database (Denmark)

    Schumacher, Johannes; Christiansen, Jesper Riis

    2015-01-01

    Forests contribute to improve water quality, affect drinking water resources, and therefore influence water supply on a regional level. The forest canopy structure affects the retention of precipitation (Pr) in the canopy and hence the amount of water transferred to the forest floor termed canopy...... impacts water resources on a large scale in regions where forests play a major role in water resource management....

  1. The Atmospheric Chemistry and Canopy Exchange Simulation System (ACCESS: model description and application to a temperate deciduous forest canopy

    Directory of Open Access Journals (Sweden)

    R. D. Saylor

    2013-01-01

    Full Text Available Forest canopies are primary emission sources of biogenic volatile organic compounds (BVOCs and have the potential to significantly influence the formation and distribution of secondary organic aerosol (SOA mass. Biogenically-derived SOA formed as a result of emissions from the widespread forests across the globe may affect air quality in populated areas, degrade atmospheric visibility, and affect climate through direct and indirect forcings. In an effort to better understand the formation of SOA mass from forest emissions, a 1-D column model of the multiphase physical and chemical processes occurring within and just above a vegetative canopy is being developed. An initial, gas-phase-only version of this model, the Atmospheric Chemistry and Canopy Exchange Simulation System (ACCESS, includes processes accounting for the emission of BVOCs from the canopy, turbulent vertical transport within and above the canopy and throughout the height of the planetary boundary layer (PBL, near-explicit representation of chemical transformations, mixing with the background atmosphere and bi-directional exchange between the atmosphere and canopy and the atmosphere and forest floor. The model formulation of ACCESS is described in detail and results are presented for an initial application of the modeling system to Walker Branch Watershed, an isoprene-emission-dominated forest canopy in the southeastern United States which has been the focal point for previous chemical and micrometeorological studies. Model results of isoprene profiles and fluxes are found to be consistent with previous measurements made at the simulated site and with other measurements made in and above mixed deciduous forests in the southeastern United States. Sensitivity experiments are presented which explore how canopy concentrations and fluxes of gas-phase precursors of SOA are affected by background anthropogenic nitrogen oxides (NOx. Results from these experiments suggest that the

  2. New insights into the morphology, reproduction and distribution of the large-tuberculate octopus Graneledone macrotyla from the Patagonian slope

    Directory of Open Access Journals (Sweden)

    Ángel Guerra

    2012-05-01

    Full Text Available The new information reported in this paper is based on 11 specimens of the large-tuberculate octopus Graneledone macrotyla. These specimens were caught in bottom trawl surveys ATLANTIS 2009 and 2010 carried out on the Patagonian slope off the Argentinean Economic Exclusive Zone between 24 February and 1 April 2009 and from 9 March to 5 April 2010 respectively. A new diagnosis and a complete description of the species are provided. This is the first time that stylets, beaks and spermatophores are described. This is also the first time in which mature females have been studied and the female genitalia described. Like other eledonid octopods, G. macrotyla does not have spermathecae in the oviducal glands. The presence of fertilized eggs inside the ovary suggests that fertilization takes place within the ovary. The simultaneous occurrence of oocyte cohorts at different oogenic stages suggests that the species is a multiple spawner. G. macrotyla inhabits shallower waters on the Patagonian slope (475-921 m than in the subantartic area (1647-2044 m. From a biogeographical point of view, our data show that G. macrotyla inhabits the plume of cold subantarctic waters, which is pushed far north into the southwestern Atlantic by the Falkland (Malvinas Current.

  3. Soil organic matter dynamics at the paramo and puna highlands in the Andean mountains

    Science.gov (United States)

    Ángeles Muñoz, M.; Faz, Ángel; Mermut, Ahmet R.; Zornoza, Raúl

    2014-05-01

    Mountains and uplands represent the most diverse and fragile ecosystems in the world, cover about 20% of the terrestrial surface and are distributed across all continents and major ecoregions. The Andean Plateau is the main mountain range of the American continent and one of the largest in the world with more than 7,500 km. The soil organic matter is a corner stone in the fertility management of the Andean agriculture as well as in the erosion control. However, its role is still much unknown in these ecosystems. Moreover, the influence of current global climatic change on soil organic C reservoirs and dynamics is still not clearly understood. The aim of this work was to review the soil C dynamics and the implication of the soil organic matter in the fertility management, erosion control, conservation of biodiversity and global climate change to improve the knowledge on the mountain Andean highlands. Climate, landscape, soil C pools, biomass and management were studied. In general, the Andean climate is affected by three main factors: ocean currents, winds and orography characterized by an abrupt topography. The entire Andean belt is segmented into the Northern, Central and Southern Andes. Northern Andes are called paramo and are characterized by humid climate while Central and Southern Andes dryer zones are called puna. Most of the region is tectonically and volcanically active. Sedimentary rocks predominated in the paramo while sedimentary, igneous and metamorphic ones prevailed in the puna. The most common soils were Andosols, Regosols, Umbrisols and Histosols. The cold and wet climate and the low atmospheric pressure favored organic matter accumulation in the soil. The accumulation of organic matter is further enhanced by the formation of organomineral complexes strongly resistant to the microbial breakdown mainly in the paramo. High organic C contents were observed in the paramo (10%) oppositely to the low contents found in the dryer puna (1%). The C/N ratio

  4. Lost crops of the Incas: Origins of domestication of the Andean pulse crop tarwi, Lupinus mutabilis.

    Science.gov (United States)

    Atchison, Guy W; Nevado, Bruno; Eastwood, Ruth J; Contreras-Ortiz, Natalia; Reynel, Carlos; Madriñán, Santiago; Filatov, Dmitry A; Hughes, Colin E

    2016-09-01

    The Andean highlands are a hotspot of domestication, yet our understanding of the origins of early Andean agriculture remains fragmentary. Key questions of where, when, how many times, and from what progenitors many Andean crops were domesticated remain unanswered. The Andean lupine crop tarwi (Lupinus mutabilis) is a regionally important pulse crop with exceptionally high seed protein and oil content and is the focus of modern breeding efforts, but its origins remain obscure. A large genome-wide DNA polymorphism data set was generated using nextRADseq to infer relationships among more than 200 accessions of Andean Lupinus species, including 24 accessions of L. mutabilis and close relatives. Phylogenetic and demographic analyses were used to identify the likely progenitor of tarwi and elucidate the area and timing of domestication in combination with archaeological evidence. We infer that tarwi was domesticated once in northern Peru, most likely in the Cajamarca region within, or adjacent to the extant distribution of L. piurensis, which is the most likely wild progenitor. Demographic analyses suggest that tarwi split from L. piurensis around 2600 BP and suffered a classical domestication bottleneck. The earliest unequivocal archaeological evidence of domesticated tarwi seeds is from the Mantaro Valley, central Peru ca. 1800 BP. A single origin of tarwi from L. piurensis in northern Peru provides a robust working hypothesis for the domestication of this regionally important crop and is one of the first clear-cut examples of a crop originating in the highlands of northern Peru. © 2016 Botanical Society of America.

  5. Reductions of plant cover induced by sheep grazing change the above-belowground partition and chemistry of organic C stocks in arid rangelands of Patagonian Monte, Argentina.

    Science.gov (United States)

    Larreguy, C; Carrera, A L; Bertiller, M B

    2017-09-01

    The objective of this study was to estimate the size and chemical quality of the total organic C stock and its partition between above-belowground plant parts and soil at sites with different plant cover induced by sheep grazing in the arid Patagonian Monte. This study was conducted at six representative sites with increasing signs of canopy disturbance attributed to grazing pressure. We used faeces density as a proxy of grazing pressure at each site. We assessed the total plant cover, shrub and perennial grass cover, total standing aboveground biomass (AGB), litter mass and belowground biomass (BGB) at each site. We further estimated the content of organic C, lignin and soluble phenols in plant compartments and the content of organic C, organic C in humic substances (recalcitrant C) and water soluble C (labile C) in soil at each site. Total plant cover was significantly related to grazing pressure. Standing AGB and litter mass decreased with increasing canopy disturbance while BGB did not vary across sites. Total organic C stock and the organic C stock in standing AGB increased with increasing total plant, shrub, and perennial grass cover. The organic C stock in litter mass increased with increasing total plant and shrub cover, while the organic C stock in BGB did not vary across sites. Lignin content in plant compartments increased with increasing total and shrub cover, while soluble phenols content did not change across sites. The organic C stock and the water soluble C content in soil were positively associated with perennial grass cover. Changes in total plant cover induced by grazing pressure negatively affected the size of the total organic C stock, having minor impact on the size of belowground than aboveground components. The reduction of perennial grass cover was reflected in decreasing chemical quality of the organic C stock in soil. Accordingly, plant managerial strategies should not only be focused on the amount of organic C sequestered but also on the

  6. West Coast Canopy-Forming Kelp, 1989-2014

    Data.gov (United States)

    National Oceanic and Atmospheric Administration, Department of Commerce — These data include the general extents of canopy-forming kelp surveys from 1989 to 2014 and a compilation of existing data sets delineating canopy-forming kelp beds...

  7. Thermal IR exitance model of a plant canopy

    Science.gov (United States)

    Kimes, D. S.; Smith, J. A.; Link, L. E.

    1981-01-01

    A thermal IR exitance model of a plant canopy based on a mathematical abstraction of three horizontal layers of vegetation was developed. Canopy geometry within each layer is quantitatively described by the foliage and branch orientation distributions and number density. Given this geometric information for each layer and the driving meteorological variables, a system of energy budget equations was determined and solved for average layer temperatures. These estimated layer temperatures, together with the angular distributions of radiating elements, were used to calculate the emitted thermal IR radiation as a function of view angle above the canopy. The model was applied to a lodgepole pine (Pinus contorta) canopy over a diurnal cycle. Simulated vs measured radiometric average temperatures of the midcanopy layer corresponded with 2 C. Simulation results suggested that canopy geometry can significantly influence the effective radiant temperature recorded at varying sensor view angles.

  8. A winter dinoflagellate bloom drives high rates of primary production in a Patagonian fjord ecosystem

    Science.gov (United States)

    Montero, P.; Pérez-Santos, I.; Daneri, G.; Gutiérrez, M. H.; Igor, G.; Seguel, R.; Purdie, D.; Crawford, D. W.

    2017-12-01

    A dense winter bloom of the dinoflagellate Heterocapsa triquetra was observed at a fixed station (44°35.3‧S; 72°43.6‧W) in the Puyuhuapi Fjord in Chilean Patagonia during July 2015. H. triquetra dominated the phytoplankton community in the surface waters between 2 and 15 m (13-58 × 109 cell m-2), with abundances some 3 to 15 times higher than the total abundance of the diatom assemblage, which was dominated by Skeletonema spp. The high abundance of dinoflagellates was reflected in high rates of gross primary production (GPP; 0.6-1.6 g C m-2 d-1) and chlorophyll-a concentration (Chl-a; 70-199.2 mg m-2) that are comparable to levels reported in spring diatom blooms in similar Patagonian fjords. We identify the main forcing factors behind a pulse of organic matter production during the non-productive winter season, and test the hypothesis that low irradiance levels are a key factor limiting phytoplankton blooms and subsequent productivity during winter. Principal Component Analysis (PCA) indicated that GPP rates were significantly correlated (r = -0.8, p bloom. The bloom occurred under low surface irradiance levels characteristic of austral winter and was accompanied by strong northern winds, associated with the passage of a low-pressure system, and a water column dominated by double diffusive layering. To our knowledge, this is the first report of a dense dinoflagellate bloom during deep austral winter in a Patagonian fjord, and our data challenge the paradigm of light limitation as a factor controlling phytoplankton blooms in this region in winter.

  9. Unity and Difference in Andean Songs

    Directory of Open Access Journals (Sweden)

    Charles Maurice Pigott

    2013-03-01

    Full Text Available This essay explores the concepts of “unity” and “difference” in Andean songs. The verses pertain to the Masha ritual enacted annually in Mangas, central Peru, and combine Quechua (the indigenous language with Spanish. Through detailed exegesis of the texts, this essay argues that, far from being irreconcilable, “unity” and “difference” are best understood as mutually informing since the recognition of difference opens up the parameters of potential exchange. This optic is informed by a worldview that emphasizes “relation” over “entities.”

  10. Identifying signatures of natural selection in Tibetan and Andean populations using dense genome scan data.

    Directory of Open Access Journals (Sweden)

    Abigail Bigham

    2010-09-01

    Full Text Available High-altitude hypoxia (reduced inspired oxygen tension due to decreased barometric pressure exerts severe physiological stress on the human body. Two high-altitude regions where humans have lived for millennia are the Andean Altiplano and the Tibetan Plateau. Populations living in these regions exhibit unique circulatory, respiratory, and hematological adaptations to life at high altitude. Although these responses have been well characterized physiologically, their underlying genetic basis remains unknown. We performed a genome scan to identify genes showing evidence of adaptation to hypoxia. We looked across each chromosome to identify genomic regions with previously unknown function with respect to altitude phenotypes. In addition, groups of genes functioning in oxygen metabolism and sensing were examined to test the hypothesis that particular pathways have been involved in genetic adaptation to altitude. Applying four population genetic statistics commonly used for detecting signatures of natural selection, we identified selection-nominated candidate genes and gene regions in these two populations (Andeans and Tibetans separately. The Tibetan and Andean patterns of genetic adaptation are largely distinct from one another, with both populations showing evidence of positive natural selection in different genes or gene regions. Interestingly, one gene previously known to be important in cellular oxygen sensing, EGLN1 (also known as PHD2, shows evidence of positive selection in both Tibetans and Andeans. However, the pattern of variation for this gene differs between the two populations. Our results indicate that several key HIF-regulatory and targeted genes are responsible for adaptation to high altitude in Andeans and Tibetans, and several different chromosomal regions are implicated in the putative response to selection. These data suggest a genetic role in high-altitude adaption and provide a basis for future genotype/phenotype association

  11. Hierarchical Canopy Dynamics of Electrolyte-Doped Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.

    2013-12-23

    Nanoscale ionic materials (NIMs) are organic-inorganic hybrids prepared from ionically functionalized nanoparticles (NP) neutralized by oligomeric polymer counterions. NIMs are designed to behave as liquids under ambient conditions in the absence of solvent and have no volatile organic content, making them useful for a number of applications. We have used nuclear magnetic resonance relaxation and pulsed-field gradient NMR to probe local and collective canopy dynamics in NIMs based on 18-nm silica NPs with a covalently bound anionic corona, neutralized by amine-terminated ethylene oxide/propylene oxide block copolymers. The NMR relaxation studies show that the nanosecond-scale canopy dynamics depend on the degree of neutralization, the canopy radius of gyration, and crowding at the ionically modified NP surface. Two canopy populations are observed in the diffusion experiments, demonstrating that one fraction of the canopy is bound to the NP surface on the time scale (milliseconds) of the diffusion experiment and is surrounded by a more mobile layer of canopy that is unable to access the surface due to molecular crowding. The introduction of electrolyte ions (Na+ or Mg2+) screens the canopy-corona electrostatic interactions, resulting in a reduced bulk viscosity and faster canopy exchange. The magnitude of the screening effect depends upon ion concentration and valence, providing a simple route for tuning the macroscopic properties of NIMs. © 2013 American Chemical Society.

  12. Hierarchical Canopy Dynamics of Electrolyte-Doped Nanoscale Ionic Materials

    KAUST Repository

    Jespersen, Michael L.; Mirau, Peter A.; von Meerwall, Ernst D.; Koerner, Hilmar; Vaia, Richard A.; Fernandes, Nikhil J.; Giannelis, Emmanuel P.

    2013-01-01

    Nanoscale ionic materials (NIMs) are organic-inorganic hybrids prepared from ionically functionalized nanoparticles (NP) neutralized by oligomeric polymer counterions. NIMs are designed to behave as liquids under ambient conditions in the absence of solvent and have no volatile organic content, making them useful for a number of applications. We have used nuclear magnetic resonance relaxation and pulsed-field gradient NMR to probe local and collective canopy dynamics in NIMs based on 18-nm silica NPs with a covalently bound anionic corona, neutralized by amine-terminated ethylene oxide/propylene oxide block copolymers. The NMR relaxation studies show that the nanosecond-scale canopy dynamics depend on the degree of neutralization, the canopy radius of gyration, and crowding at the ionically modified NP surface. Two canopy populations are observed in the diffusion experiments, demonstrating that one fraction of the canopy is bound to the NP surface on the time scale (milliseconds) of the diffusion experiment and is surrounded by a more mobile layer of canopy that is unable to access the surface due to molecular crowding. The introduction of electrolyte ions (Na+ or Mg2+) screens the canopy-corona electrostatic interactions, resulting in a reduced bulk viscosity and faster canopy exchange. The magnitude of the screening effect depends upon ion concentration and valence, providing a simple route for tuning the macroscopic properties of NIMs. © 2013 American Chemical Society.

  13. Water Resources and Groundwater in a Glaciated Andean Watershed (Cordillera Blanca, Peru)

    Science.gov (United States)

    McKenzie, J. M.; Gordon, R.; Baraer, M.; Lautz, L.; Mark, B. G.; Wigmore, O.; Chavez, D.; Aubry-Wake, C.

    2014-12-01

    It is estimated that almost 400 million people live in watersheds where glaciers provide at least 10% of the runoff, yet many questions remain regarding the impact of climate change and glacier recession on water resources derived from these high mountain watersheds. We present research from the Cordillera Blanca, Peru, an area with the highest density of glaciers in the tropics. While glacier meltwater buffers stream discharge throughout the range, groundwater is a major component of dry season runoff, contributing up to 50-70% of outflow in some tributaries. In order to predict future changes to water resources it is critical to understand how groundwater can offset future hydrologic stress by maintaining stream baseflow, including recharge mechanisms, subsurface pathways, storage, and net fluxes to rivers. We present a synthesis of results based on hydrologic modeling, drilling/piezometers, geophysics, and artificial and natural hydrologic tracers. Our findings show that 'pampas', low-relief mountain valleys, are critical for baseflow generation by storing groundwater on interannual timescales. Pampas have a total area of ~65 km2 and are comprised of unconsolidated glacial, talus, lacustrine and wetland (bofedales) deposits. The valleys commonly have buried talus aquifers that are overlain by low permeability, glaciolacustrine deposits. Glaciofluvial outwash deposits and small wetlands also act as unconfined aquifers. These groundwater systems appear to be primarily recharged by wet season precipitation, and at higher elevations also by glacial meltwater. Additionally a ubiquitous feature in the valleys are springs, often located at the base of talus deposits, which generate a large hydrologic flux within the hydrologic systems. While glaciers are the most visible and vulnerable component of the Andean waterscape, we argue that it is crucial to understand the complete mountain hydrologic cycle, including groundwater, in order to understand the ongoing

  14. Directional Canopy Emissivity Estimation Based on Spectral Invariants

    Science.gov (United States)

    Guo, M.; Cao, B.; Ren, H.; Yongming, D.; Peng, J.; Fan, W.

    2017-12-01

    Land surface emissivity is a crucial parameter for estimating land surface temperature from remote sensing data and also plays an important role in the physical process of surface energy and water balance from local to global scales. To our knowledge, the emissivity varies with surface type and cover. As for the vegetation, its canopy emissivity is dependent on vegetation types, viewing zenith angle and structure that changes in different growing stages. Lots of previous studies have focused on the emissivity model, but few of them are analytic and suited to different canopy structures. In this paper, a new physical analytic model is proposed to estimate the directional emissivity of homogenous vegetation canopy based on spectral invariants. The initial model counts the directional absorption in six parts: the direct absorption of the canopy and the soil, the absorption of the canopy and soil after a single scattering and after multiple scattering within the canopy-soil system. In order to analytically estimate the emissivity, the pathways of photons absorbed in the canopy-soil system are traced using the re-collision probability in Fig.1. After sensitive analysis on the above six absorptions, the initial complicated model was further simplified as a fixed mathematic expression to estimate the directional emissivity for vegetation canopy. The model was compared with the 4SAIL model, FRA97 model, FRA02 model and DART model in Fig.2, and the results showed that the FRA02 model is significantly underestimated while the FRA97 model is a little underestimated, on basis of the new model. On the contrary, the emissivity difference between the new model with the 4SAIL model and DART model was found to be less than 0.002. In general, since the new model has the advantages of mathematic expression with accurate results and clear physical meaning, the model is promising to be extended to simulate the directional emissivity for the discrete canopy in further study.

  15. Production and use of the pastures of the Colombia high Andean areas

    International Nuclear Information System (INIS)

    Lotero Cadavid, J.

    1993-01-01

    A relationship of the most common pastures is made in the Andean high area between the 2000 and 3000 m.s.n.m. and of their native vegetable associations, as well as of the invaders plants and overgrowths. The gramineae germoplasm and leguminous is indicated that has been proven lower those conditions. Data of yield average of dry matter are presented for native and introduced grasses of cold climate in Colombia. Equally it is indicated the daily earnings by animal, the load capacity and the animal production with different fertilization systems and some parameters of productivity are shown of gramineous and leguminous introduced in the high areas of Colombia. The nutritious value of gramineous and leguminous of cold climate and its chemical composition are made. A description is made of the ecological areas of the Andean high area and the pastures types that prevail in them. The factors are described that they impact in the degree of deterioration of the pastures like the environment, the same grass, the handling, the livestock, the type of exploitation, the holding of the earth and the administration. The agricultural production systems are mentioned that are associate the Andean pastures, as well as the main obstacles to increase the production of the systems and pastures and their possible solutions

  16. Estimation of leaf area index for cotton canopies using the LI-COR LAI-2000 plant canopy analyzer

    International Nuclear Information System (INIS)

    Hicks, S.K.; Lascano, R.J.

    1995-01-01

    Measurement of leaf area index (LAI) is useful for understanding cotton (Gossypium hirsutum L.) growth, water use, and canopy light interception. Destructive measurement is time consuming and labor intensive. Our objective was to evaluate sampling procedures using the Li-Cor (Lincoln, NE) LAI 2000 plant canopy analyzer (PCA) for nondestructive estimation of cotton LAI on the southern High Plains of Texas. We evaluated shading as a way to allow PCA measurements in direct sunlight and the influence of solar direction when using this procedure. We also evaluated a test of canopy homogeneity (information required for setting PCA field of view), determined the number of below-canopy measurements required, examined the influence of leaf wilting on PCA LAI determinations, and tested an alternative method (masking the sensor's two outer rings) for calculating LAI from PCA measurements. The best agreement between PCA and destructively measured LAI values was obtained when PCA observations were made either during uniformly overcast conditions or around solar noon using the shading method. Heterogeneous canopies with large gaps between rows required both a restricted (45 degrees) azimuthal field of view and averaging the LAI values for two transects, made with the field of view parallel and then perpendicular to the row direction. This method agreed well (r2 = 0.84) with destructively measured LAI in the range of 0.5 to 3.5 and did not deviate from a 1:1 relationship. The PCA underestimated LAI by greater than or equal 20% when measurements were made on canopies wilted due to water stress. Masking the PCA sensor's outer rings did not improve the relationship between estimated and measured LAI in the range of LAI sampled

  17. Measuring canopy structure with an airborne laser altimeter

    International Nuclear Information System (INIS)

    Ritchie, J.C.; Evans, D.L.; Jacobs, D.; Everitt, J.H.; Weltz, M.A.

    1993-01-01

    Quantification of vegetation patterns and properties is needed to determine their role on the landscape and to develop management plans to conserve our natural resources. Quantifying vegetation patterns from the ground, or by using aerial photography or satellite imagery is difficult, time consuming, and often expensive. Digital data from an airborne laser altimeter offer an alternative method to quantify selected vegetation properties and patterns of forest and range vegetation. Airborne laser data found canopy heights varied from 2 to 6 m within even-aged pine forests. Maximum canopy heights measured with the laser altimeter were significantly correlated to measurements made with ground-based methods. Canopy shape could be used to distinguish deciduous and evergreen trees. In rangeland areas, vegetation heights, spatial patterns, and canopy cover measured with the laser altimeter were significantly related with field measurements. These studies demonstrate the potential of airborne laser data to measure canopy structure and properties for large areas quickly and quantitatively

  18. The roles of dimensionality, canopies and complexity in ecosystem monitoring.

    Directory of Open Access Journals (Sweden)

    Christopher H R Goatley

    Full Text Available Canopies are common among autotrophs, increasing their access to light and thereby increasing competitive abilities. If viewed from above canopies may conceal objects beneath them creating a 'canopy effect'. Due to complexities in collecting 3-dimensional data, most ecosystem monitoring programmes reduce dimensionality when sampling, resorting to planar views. The resultant 'canopy effects' may bias data interpretation, particularly following disturbances. Canopy effects are especially relevant on coral reefs where coral cover is often used to evaluate and communicate ecosystem health. We show that canopies hide benthic components including massive corals and algal turfs, and as planar views are almost ubiquitously used to monitor disturbances, the loss of vulnerable canopy-forming corals may bias findings by presenting pre-existing benthic components as an altered system. Our reliance on planar views in monitoring ecosystems, especially coral cover on reefs, needs to be reassessed if we are to better understand the ecological consequences of ever more frequent disturbances.

  19. Biophysical information in asymmetric and symmetric diurnal bidirectional canopy reflectance

    Science.gov (United States)

    Vanderbilt, Vern C.; Caldwell, William F.; Pettigrew, Rita E.; Ustin, Susan L.; Martens, Scott N.; Rousseau, Robert A.; Berger, Kevin M.; Ganapol, B. D.; Kasischke, Eric S.; Clark, Jenny A.

    1991-01-01

    The authors present a theory for partitioning the information content in diurnal bidirectional reflectance measurements in order to detect differences potentially related to biophysical variables. The theory, which divides the canopy reflectance into asymmetric and symmetric functions of solar azimuth angle, attributes asymmetric variation to diurnal changes in the canopy biphysical properties. The symmetric function is attributed to the effects of sunlight interacting with a hypothetical average canopy which would display the average diurnal properties of the actual canopy. The authors analyzed radiometer data collected diurnally in the Thematic Mapper wavelength bands from two walnut canopies that received differing irrigation treatments. The reflectance of the canopies varied with sun and view angles and across seven bands in the visible, near-infrared, and middle infrared wavelength regions. Although one of the canopies was permanently water stressed and the other was stressed in mid-afternoon each day, no water stress signature was unambiguously evident in the reflectance data.

  20. The Andean Common Market: An Experiment in Regional Cooperation.

    Science.gov (United States)

    Carlson, Reynold E.

    The Grupo Andino (GRAN) was formed in 1969 as an effort at economic integration by six Latin American countries (Bolivia, Chile, Columbia, Ecuador, Peru, and Venezuela). It was an outgrowth of its predecessor, the Latin American Free Trade Association (LAFTA), which had been formed in 1960 with eleven member countries. The Andean Group (GRAN) from…

  1. Helminth communities of two populations of Myotis chiloensis (Chiroptera: Vespertilionidae from Argentinean Patagonia

    Directory of Open Access Journals (Sweden)

    Antonella C. Falconaro

    2018-04-01

    Full Text Available Most of the studies on chiropteran endoparasites in Argentina come from the Central and Northeast regions of the country, and there is only one parasitological study of bats from the Argentinean Patagonia. The aim of this study is to describe the helminth fauna of 42 Myotis chiloensis, comparing the composition and the structure of the endoparasite communities between two populations, inhabiting different environments in Andean humid forest and the ecotone between forest and Patagonian steppe. A total of 697 helminths were recovered from 33 bats: five species of trematodes, Ochoterenatrema sp., Paralecithodendrium sp., Parabascus limatulus, Parabascus sp., and Postorchigenes cf. joannae, two species of cestodes, Vampirolepis sp. 1 and Vampirolepis sp. 2, and three species of nematodes, Allintoshius baudi, Physaloptera sp., and Physocephalus sp. All the helminths, but Physocephalus sp., were recovered from the small and large intestine. This is the first survey of M. chiloensis’ helminth fauna. All the species, but A. baudi, represent new records of helminths in Patagonian bats. There were differences of parasite species richness between localities and both bat populations share almost half of the endoparasite species. Different preferences for intestinal regions were found for three species of trematodes in the bats from the site in the humid forest. Myotis chiloensis serves as both a definitive and intermediate host for endoparasites in the Patagonian ecosystem. Keywords: Bats, Parasites, South America

  2. Ignition probability of fine dead surface fuels of native Patagonian forests or Argentina

    Directory of Open Access Journals (Sweden)

    Lucas O. Bianchi

    2014-04-01

    Full Text Available Aim of study: The Canadian Forest Fire Weather Index (FWI is being implemented all over the world. This index is being adapted to the Argentinean ecosystems since the year 2000. With the objective of calibrating the Fine Fuel Moisture Code (FFMC of the FWI system to Patagonian forests, we studied the relationship between ignition probability and fine dead surface fuel moisture content (MC as an indicator of potential fire ignition.Area of study: The study area is located in northwestern Patagonia, Argentina, and comprised two main forest types (cypress and ñire grown under a Mediterranean climate, with a dry summer and precipitations during winter and autumn (~500-800 mm per year.Material and Methods: We conducted lab ignition tests fires to determine the threshold of fine dead fuel ignition at different MC levels. Moisture content of dead fine surface fuels in the field was measured every 10-15 days from November to March for three seasons. We calculated the FFMC during these seasons and correlated it with the measured MC by applying a logistic regression model. We combined the results of the ignition tests and of the regressions to suggest FFMC categories for estimating fire danger in Patagonian forests.Main results: The ignition threshold occurred at MC values of 21.5 and 25.0% for cypress and ñire sites, respectively. The MC measured varied from 7.3 to 129.6%, and the calculated FFMC varied between 13.4 and 92.6. Highly significant regressions resulted when FFMC was related to MC. The ignition threshold corresponded to a FFMC=85. We proposed to divide the FFMC scale in three fire danger categories: Low (FFMC≤85, High (8589.Research highlights: Our results provide a useful tool for predicting fire danger in these ecosystems, and are a contribution to the development of the Argentinean Fire Danger Rating and a reference for similar studies in other countries where the FWI is being implemented

  3. Exploring Relationships between Canopy Architecture, Light Distribution, and Photosynthesis in Contrasting Rice Genotypes Using 3D Canopy Reconstruction

    Directory of Open Access Journals (Sweden)

    Alexandra J. Burgess

    2017-05-01

    Full Text Available The arrangement of leaf material is critical in determining the light environment, and subsequently the photosynthetic productivity of complex crop canopies. However, links between specific canopy architectural traits and photosynthetic productivity across a wide genetic background are poorly understood for field grown crops. The architecture of five genetically diverse rice varieties—four parental founders of a multi-parent advanced generation intercross (MAGIC population plus a high yielding Philippine variety (IR64—was captured at two different growth stages using a method for digital plant reconstruction based on stereocameras. Ray tracing was employed to explore the effects of canopy architecture on the resulting light environment in high-resolution, whilst gas exchange measurements were combined with an empirical model of photosynthesis to calculate an estimated carbon gain and total light interception. To further test the impact of different dynamic light patterns on photosynthetic properties, an empirical model of photosynthetic acclimation was employed to predict the optimal light-saturated photosynthesis rate (Pmax throughout canopy depth, hypothesizing that light is the sole determinant of productivity in these conditions. First, we show that a plant type with steeper leaf angles allows more efficient penetration of light into lower canopy layers and this, in turn, leads to a greater photosynthetic potential. Second the predicted optimal Pmax responds in a manner that is consistent with fractional interception and leaf area index across this germplasm. However, measured Pmax, especially in lower layers, was consistently higher than the optimal Pmax indicating factors other than light determine photosynthesis profiles. Lastly, varieties with more upright architecture exhibit higher maximum quantum yield of photosynthesis indicating a canopy-level impact on photosynthetic efficiency.

  4. Forest canopy temperatures: dynamics, controls, and relationships with ecosystem fluxes

    Science.gov (United States)

    Still, C. J.; Griffith, D.; Kim, Y.; Law, B. E.; Hanson, C. V.; Kwon, H.; Schulze, M.; Detto, M.; Pau, S.

    2017-12-01

    Temperature strongly affects enzymatic reactions, ecosystem biogeochemistry, and species distributions. Although most focus is on air temperature, the radiative or skin temperature of plants is more relevant. Canopy skin temperature dynamics reflect biophysical, physiological, and anatomical characteristics and interactions with the environment, and can be used to examine forest responses to stresses like droughts and heat waves. Thermal infrared (TIR) imaging allows for extensive temporal and spatial sampling of canopy temperatures, particularly compared to spot measurements using thermocouples. We present results of TIR imaging of forest canopies at eddy covariance flux tower sites in the US Pacific Northwest and in Panama. These forests range from an old-growth temperate rainforest to a second growth semi-arid pine forest to a semi-deciduous tropical forest. Canopy temperature regimes at these sites are highly variable. Canopy temperatures at all forest sites displayed frequent departures from air temperature, particularly during clear sky conditions, with elevated canopy temperatures during the day and depressed canopy temperatures at night compared to air temperature. Comparison of canopy temperatures to fluxes of carbon dioxide, water vapor, and energy reveals stronger relationships than those found with air temperature. Daytime growing season net ecosystem exchange at the pine forest site is better explained by canopy temperature (r2 = 0.61) than air temperature (r2 = 0.52). At the semi-deciduous tropical forest, canopy photosynthesis is highly correlated with canopy temperature (r2 = 0.51), with a distinct optimum temperature for photosynthesis ( 31 °C) that agrees with leaf-level measurements. During the peak of one heat wave at an old-growth temperate rainforest, hourly averaged air temperature exceeded 35 °C, 10 °C above average. Peak hourly canopy temperature approached 40 °C, and leaf-to-air vapor pressure deficit exceeded 6 kPa. These extreme

  5. Alkaline lavas from southern Mendoza, Argentina, extend the Patagonian DUPAL mantle field to the north

    Science.gov (United States)

    Soager, N.; Holm, P. M.; Llambias, E.

    2010-12-01

    The lavas sampled around Río Colorado ~37°S at the border of Mendoza and Neuquén provinces, Argentina, define an OIB-like end-member composition for the Pleistocene and Holocene activity in the Payún Matrú volcanic field. Although positioned in the far back-arc of the Andes, only a few lavas show signs of involvement of slab fluids or crustal contamination such as relatively high LILEs relative to Nb. The very low La/Nb (~0.66) and Zr/Nb (~5) and high U/Pb (0.3-0.4) of the end-member composition clearly distinguish the source from normal MORB mantle, while high Ba/Nb (~10) and K/Nb (370-400) compared to FOZO and HIMU type OIBs suggest an EM type of mantle. Overall, the trace element patterns of the Río Colorado lavas are similar to the central and north Patagonian intraplate basalts and to South Atlantic E-MORB affected by the Discovery plume and the LOMU component (le Roux et al., 2002, EPSL 203). The isotopic composition of the Río Colorado component has a 206Pb/204Pb = 18.4, 207Pb/204Pb = 15.58, 208Pb/204Pb = 38.3, 87Sr/86Sr = 0.70353 and 143Nd/144Nd = 0.51285. This composition overlaps the central and north Patagonian intraplate basalts in Pb-isotopic space but is slightly less enriched in Sr and Nd-isotopes. It is distinctly different from the FOZO like composition of the south Patagonian intraplate basalts and the nearby Juan Fernandéz plume but similar to the South Atlantic N-MORB and MORB from the southern Chile Ridge segment 4 (Sturm et al., 1999, JGR 104) described as DUPAL type. The DUPAL-MORB type isotopic composition and the plume-like trace element patterns of the Río Colorado lavas suggest the presence of a weak plume beneath the area. The eruption of the large Payún Matrú volcano and the gigantic Pleistocene flood basalts also calls for a thermal anomaly to produce these melts during a weakly compressive tectonic regime with no significant addition of slab fluids. This was supported by Burd et al. (2008, Abstr., 7th Int. Sym. And. Geo

  6. Removing forest canopy cover restores a reptile assemblage.

    Science.gov (United States)

    Pike, David A; Webb, Jonathan K; Shine, Richard

    2011-01-01

    Humans are rapidly altering natural systems, leading to changes in the distribution and abundance of species. However, so many changes are occurring simultaneously (e.g., climate change, habitat fragmentation) that it is difficult to determine the cause of population fluctuations from correlational studies. We used a manipulative field experiment to determine whether forest canopy cover directly influences reptile assemblages on rock outcrops in southeastern Australia. Our experimental design consisted of three types of rock outcrops: (1) shady sites in which overgrown vegetation was manually removed (n = 25); (2) overgrown controls (n = 30); and (3) sun-exposed controls (n = 20). Following canopy removal, we monitored reptile responses over 30 months. Canopy removal increased reptile species richness, the proportion of shelter sites used by reptiles, and relative abundances of five species that prefer sun-exposed habitats. Our manipulation also decreased the abundances of two shade-tolerant species. Canopy cover thus directly influences this reptile assemblage, with the effects of canopy removal being dependent on each species' habitat preferences (i.e., selection or avoidance of sun-exposed habitat). Our study suggests that increases in canopy cover can cause declines of open-habitat specialists, as previously suggested by correlative studies from a wide range of taxa. Given that reptile colonization of manipulated outcrops occurred rapidly, artificially opening the canopy in ecologically informed ways could help to conserve imperiled species with patchy distributions and low vagility that are threatened by vegetation overgrowth. One such species is Australia's most endangered snake, the broadheaded snake (Hoplocephalus bungaroides).

  7. Modeling canopy-induced turbulence in the Earth system: a unified parameterization of turbulent exchange within plant canopies and the roughness sublayer (CLM-ml v0)

    Science.gov (United States)

    Bonan, Gordon B.; Patton, Edward G.; Harman, Ian N.; Oleson, Keith W.; Finnigan, John J.; Lu, Yaqiong; Burakowski, Elizabeth A.

    2018-04-01

    Land surface models used in climate models neglect the roughness sublayer and parameterize within-canopy turbulence in an ad hoc manner. We implemented a roughness sublayer turbulence parameterization in a multilayer canopy model (CLM-ml v0) to test if this theory provides a tractable parameterization extending from the ground through the canopy and the roughness sublayer. We compared the canopy model with the Community Land Model (CLM4.5) at seven forest, two grassland, and three cropland AmeriFlux sites over a range of canopy heights, leaf area indexes, and climates. CLM4.5 has pronounced biases during summer months at forest sites in midday latent heat flux, sensible heat flux, gross primary production, nighttime friction velocity, and the radiative temperature diurnal range. The new canopy model reduces these biases by introducing new physics. Advances in modeling stomatal conductance and canopy physiology beyond what is in CLM4.5 substantially improve model performance at the forest sites. The signature of the roughness sublayer is most evident in nighttime friction velocity and the diurnal cycle of radiative temperature, but is also seen in sensible heat flux. Within-canopy temperature profiles are markedly different compared with profiles obtained using Monin-Obukhov similarity theory, and the roughness sublayer produces cooler daytime and warmer nighttime temperatures. The herbaceous sites also show model improvements, but the improvements are related less systematically to the roughness sublayer parameterization in these canopies. The multilayer canopy with the roughness sublayer turbulence improves simulations compared with CLM4.5 while also advancing the theoretical basis for surface flux parameterizations.

  8. Genome-wide association study of anthracnose resistance in Andean beans

    Science.gov (United States)

    Anthracnose is a seed-borne disease of common bean (Phaseolus vulgaris L.) caused by the fungus Colletotrichum lindemuthianum, and the pathogen is cosmopolitan in distribution. The objectives of this study were to identify new sources of anthracnose resistance in a diverse panel of 230 Andean beans ...

  9. Adding seismic broadband analysis to characterize Andean backarc seismicity in Argentina

    Science.gov (United States)

    Alvarado, P.; Giuliano, A.; Beck, S.; Zandt, G.

    2007-05-01

    Characterization of the highly seismically active Andean backarc is crucial for assessment of earthquake hazards in western Argentina. Moderate-to-large crustal earthquakes have caused several deaths, damage and drastic economic consequences in Argentinean history. We have studied the Andean backarc crust between 30°S and 36°S using seismic broadband data available from a previous ("the CHARGE") IRIS-PASSCAL experiment. We collected more than 12 terabytes of continuous seismic data from 22 broadband instruments deployed across Chile and Argentina during 1.5 years. Using free software we modeled full regional broadband waveforms and obtained seismic moment tensor inversions of crustal earthquakes testing for the best focal depth for each event. We also mapped differences in the Andean backarc crustal structure and found a clear correlation with different types of crustal seismicity (i.e. focal depths, focal mechanisms, magnitudes and frequencies of occurrence) and previously mapped terrane boundaries. We now plan to use the same methodology to study other regions in Argentina using near-real time broadband data available from the national seismic (INPRES) network and global seismic networks operating in the region. We will re-design the national seismic network to optimize short-period and broadband seismic station coverage for different network purposes. This work is an international effort that involves researchers and students from universities and national government agencies with the goal of providing more information about earthquake hazards in western Argentina.

  10. The Andean Swallow (Orochelidon andecola) in Argentina

    OpenAIRE

    Mazar Barnett, Juan; Pugnali, Germán D.; Pearman Morrison, Mark; Bodrati, Alejandro; Moschione, Flavio; Clark, Ricardo; Roesler, Carlos Ignacio; Monteleone, Diego; Casañas, Hernán; Burgos Gallardo, Freddy; Segovia, José; Pagano, Luis; Povedano, Hernán; Areta, Juan Ignacio

    2016-01-01

    During ornithological studies in the provinces of Jujuy, Salta, and San Juan, we recorded the Andean Swallow Orochelidon andecola at 40 localities. These are the first records in Argentina, and also represent the southernmost for the species. Some of these localities are up to 1500 m lower than the previously known elevational limit (now 800 masl), and up to 1100 km southwards. This is a relatively poorly known swallow, and we present novel natural history data. We found evidence of breeding ...

  11. Plant canopy characteristics effect on spray deposition

    Science.gov (United States)

    While it is common for applicators to standardize their application parameters to minimize changes in settings during a season, this practice does not necessarily provide the best delivery when targeting different types of plant canopies and different zones within the canopy. The objective of this w...

  12. Within-canopy sesquiterpene ozonolysis in Amazonia

    Science.gov (United States)

    Jardine, K.; YañEz Serrano, A.; Arneth, A.; Abrell, L.; Jardine, A.; van Haren, J.; Artaxo, P.; Rizzo, L. V.; Ishida, F. Y.; Karl, T.; Kesselmeier, J.; Saleska, S.; Huxman, T.

    2011-10-01

    Through rapid reactions with ozone, which can initiate the formation of secondary organic aerosols, the emission of sesquiterpenes from vegetation in Amazonia may have significant impacts on tropospheric chemistry and climate. Little is known, however, about sesquiterpene emissions, transport, and chemistry within plant canopies owing to analytical difficulties stemming from very low ambient concentrations, high reactivities, and sampling losses. Here, we present ambient sesquiterpene concentration measurements obtained during the 2010 dry season within and above a primary tropical forest canopy in Amazonia. We show that by peaking at night instead of during the day, and near the ground instead of within the canopy, sesquiterpene concentrations followed a pattern different from that of monoterpenes, suggesting that unlike monoterpene emissions, which are mainly light dependent, sesquiterpene emissions are mainly temperature dependent. In addition, we observed that sesquiterpene concentrations were inversely related with ozone (with respect to time of day and vertical concentration), suggesting that ambient concentrations are highly sensitive to ozone. These conclusions are supported by experiments in a tropical rain forest mesocosm, where little atmospheric oxidation occurs and sesquiterpene and monoterpene concentrations followed similar diurnal patterns. We estimate that the daytime dry season ozone flux of -0.6 to -1.5 nmol m-2 s-1 due to in-canopy sesquiterpene reactivity could account for 7%-28% of the net ozone flux. Our study provides experimental evidence that a large fraction of total plant sesquiterpene emissions (46%-61% by mass) undergo within-canopy ozonolysis, which may benefit plants by reducing ozone uptake and its associated oxidative damage.

  13. Phylogeny and historical biogeography of trans-Andean cichlid fishes (Teleostei: Cichlidae)

    Czech Academy of Sciences Publication Activity Database

    Musilová, Zuzana; Říčan, O.; Říčanová, Š.; Janšta, P.; Gahura, O.; Novák, J.

    2015-01-01

    Roč. 65, č. 3 (2015), s. 333-350 ISSN 1864-5755 R&D Projects: GA MŠk LC06073 Institutional support: RVO:67985904 Keywords : Andean uplift * Andinoacara * Mesoheros Subject RIV: EG - Zoology Impact factor: 0.722, year: 2015

  14. Specular, diffuse and polarized imagery of an oat canopy

    Science.gov (United States)

    Vanderbilt, Vern C.; De Venecia, Kurt J.

    1988-01-01

    Light, polarized by specular reflection, has been found to be an important part of the light scattered by several measured plant canopies. The authors investigate for one canopy the relative importance of specularly reflected sunlight, specularly reflected light from other sources including skylight, and diffusely upwelling light. Polarization images are used to gain increased understanding of the radiation transfer process in a plant canopy. Analysis of the results suggests that properly analyzed polarized remotely sensed data, acquired under specific atmospheric conditions by a specially designed sensor, potentially provide measures of physiological and morphological states of plants in a canopy.

  15. BOREAS TE-9 NSA Canopy Biochemistry

    Science.gov (United States)

    Hall, Forrest G. (Editor); Curd, Shelaine (Editor); Margolis, Hank; Charest, Martin; Sy, Mikailou

    2000-01-01

    The BOREAS TE-9 team collected several data sets related to chemical and photosynthetic properties of leaves. This data set contains canopy biochemistry data collected in 1994 in the NSA at the YJP, OJR, OBS, UBS, and OA sites, including biochemistry lignin, nitrogen, cellulose, starch, and fiber concentrations. These data were collected to study the spatial and temporal changes in the canopy biochemistry of boreal forest cover types and how a high-resolution radiative transfer model in the mid-infrared could be applied in an effort to obtain better estimates of canopy biochemical properties using remote sensing. The data are available in tabular ASCII files. The data files are available on a CD-ROM (see document number 20010000884), or from the Oak Ridge National Laboratory (ORNL) Distributed Active Archive Center (DAAC).

  16. Modeling canopy-induced turbulence in the Earth system: a unified parameterization of turbulent exchange within plant canopies and the roughness sublayer (CLM-ml v0

    Directory of Open Access Journals (Sweden)

    G. B. Bonan

    2018-04-01

    Full Text Available Land surface models used in climate models neglect the roughness sublayer and parameterize within-canopy turbulence in an ad hoc manner. We implemented a roughness sublayer turbulence parameterization in a multilayer canopy model (CLM-ml v0 to test if this theory provides a tractable parameterization extending from the ground through the canopy and the roughness sublayer. We compared the canopy model with the Community Land Model (CLM4.5 at seven forest, two grassland, and three cropland AmeriFlux sites over a range of canopy heights, leaf area indexes, and climates. CLM4.5 has pronounced biases during summer months at forest sites in midday latent heat flux, sensible heat flux, gross primary production, nighttime friction velocity, and the radiative temperature diurnal range. The new canopy model reduces these biases by introducing new physics. Advances in modeling stomatal conductance and canopy physiology beyond what is in CLM4.5 substantially improve model performance at the forest sites. The signature of the roughness sublayer is most evident in nighttime friction velocity and the diurnal cycle of radiative temperature, but is also seen in sensible heat flux. Within-canopy temperature profiles are markedly different compared with profiles obtained using Monin–Obukhov similarity theory, and the roughness sublayer produces cooler daytime and warmer nighttime temperatures. The herbaceous sites also show model improvements, but the improvements are related less systematically to the roughness sublayer parameterization in these canopies. The multilayer canopy with the roughness sublayer turbulence improves simulations compared with CLM4.5 while also advancing the theoretical basis for surface flux parameterizations.

  17. CANOPY STRUCTURE AND DEPOSITION EFFICIENCY OF VINEYARD SPRAYERS

    Directory of Open Access Journals (Sweden)

    Gianfranco Pergher

    2007-06-01

    Full Text Available A field study was performed to analyse how deposition efficiency from an axial-fan sprayer was affected by the canopy structure of vines trained to the High Cordon, Low Cordon and Casarsa systems, at beginning of flowering and beginning of berry touch growth stages. An empirical calibration method, providing a dose rate adjustment roughly proportional to canopy height, was used. The canopy structure was assessed using the Point Quadrat method, and determining the leaf area index (LAI and the leaf layer index (LLI. Spray deposits were measured by colorimetry, using a water soluble dye (Tartrazine as a tracer. Correlation between deposits and canopy parameters were analysed and discussed. Foliar deposits per unit leaf area were relatively constant, suggesting that empirical calibration can reduce deposit variability associated with different training systems and growth stages. Total foliar deposition ranged from 33.6% and 82.3% of total spray volume, and increased proportionally with the LLI up to LLI<4. Deposits on bunches significantly decreased with the LLI in the grape zone. The results suggest that sprayer efficiency is improved by a regular, symmetrical canopy, with few leaf layers in the grape zone as in Low Cordon. However, a LLI<3 over the whole canopy and >40% gaps in the foliage both reduced total deposition, and may increase the risk for larger drift losses.

  18. Geomorphological evidences of Quaternary tectonic activities in the Santa Cruz river valley, Patagonia, Argentina

    International Nuclear Information System (INIS)

    Massabie, A.; Sanguinetti, A.; Nestiero, O.

    2007-01-01

    From Argentin lake, at west on Andean hills, to Puerto Santa Cruz on Atlantic coast, Santa Cruz river cross eastward Santa Cruz province over 250 km in Patagonia at southern Argentina. Present bed of the river has a meandering outline with first order meanders of great ratio bends and second order meanders of minor ratio bends. Principal wanderings are 45 to 55 km spaced from near Estancia La Julia or Rio Bote at west to Comandante Luis Piedrabuena at east. On river's bed middle sector these great curvatures are located at Estancia Condor Cliff and Estancia Rincon Grande. Regional and partial detailed studies allow to recognize structural control on river's bed sketch and valley s geomorphology that relates first order bends with reactivated principal faults. These faults fit well with parallel system of northwest strike of Austral Basin.On geological, geomorphologic and structural evidences recognized in Santa Cruz river, quaternary tectonic activity, related to Andean movements in southern Patagonian foreland, is postulated. (author)

  19. Marine effect of introduced salmonids: Prey consumption by exotic steelhead and anadromous brown trout in the Patagonian Continental Shelf

    Science.gov (United States)

    Ciancio, J.; Beauchamp, D.A.; Pascual, M.

    2010-01-01

    On the basis of stable isotope analysis, we estimated the marine diet of the most abundant anadromous salmonid species in Patagonian Atlantic basins. The results were coupled with bioenergetic and population models to estimate the consumption of food by salmonids and was compared with that by seabirds, the most abundant top predators in the area. Amphipods were the main salmonid prey, followed by sprat, silversides, squid, and euphausiids. The total consumption, even assuming large anadromous salmonid populations, represented Limnology and Oceanography, Inc.

  20. Effects of microhabitat and large-scale land use on stream salamander occupancy in the coalfields of Central Appalachia

    Science.gov (United States)

    Sweeten, Sara E.; Ford, W. Mark

    2016-01-01

    Large-scale coal mining practices, particularly surface coal extraction and associated valley fills as well as residential wastewater discharge, are of ecological concern for aquatic systems in central Appalachia. Identifying and quantifying alterations to ecosystems along a gradient of spatial scales is a necessary first-step to aid in mitigation of negative consequences to aquatic biota. In central Appalachian headwater streams, apart from fish, salamanders are the most abundant vertebrate predator that provide a significant intermediate trophic role linking aquatic and terrestrial food webs. Stream salamander species are considered to be sensitive to aquatic stressors and environmental alterations, as past research has shown linkages among microhabitat parameters, large-scale land use such as urbanization and logging, and salamander abundances. However, there is little information examining these relationships between environmental conditions and salamander occupancy in the coalfields of central Appalachia. In the summer of 2013, 70 sites (sampled two to three times each) in the southwest Virginia coalfields were visited to collect salamanders and quantify stream and riparian microhabitat parameters. Using an information-theoretic framework, effects of microhabitat and large-scale land use on stream salamander occupancy were compared. The findings indicate that Desmognathus spp. occupancy rates are more correlated to microhabitat parameters such as canopy cover than to large-scale land uses. However, Eurycea spp. occupancy rates had a strong association with large-scale land uses, particularly recent mining and forest cover within the watershed. These findings suggest that protection of riparian habitats is an important consideration for maintaining aquatic systems in central Appalachia. If this is not possible, restoration riparian areas should follow guidelines using quick-growing tree species that are native to Appalachian riparian areas. These types of trees

  1. Freezing resistance in Patagonian woody shrubs: the role of cell wall elasticity and stem vessel size.

    Science.gov (United States)

    Zhang, Yong-Jiang; Bucci, Sandra J; Arias, Nadia S; Scholz, Fabian G; Hao, Guang-You; Cao, Kun-Fang; Goldstein, Guillermo

    2016-08-01

    Freezing resistance through avoidance or tolerance of extracellular ice nucleation is important for plant survival in habitats with frequent subzero temperatures. However, the role of cell walls in leaf freezing resistance and the coordination between leaf and stem physiological processes under subzero temperatures are not well understood. We studied leaf and stem responses to freezing temperatures, leaf and stem supercooling, leaf bulk elastic modulus and stem xylem vessel size of six Patagonian shrub species from two sites (plateau and low elevation sites) with different elevation and minimum temperatures. Ice seeding was initiated in the stem and quickly spread to leaves, but two species from the plateau site had barriers against rapid spread of ice. Shrubs with xylem vessels smaller in diameter had greater stem supercooling capacity, i.e., ice nucleated at lower subzero temperatures. Only one species with the lowest ice nucleation temperature among all species studied exhibited freezing avoidance by substantial supercooling, while the rest were able to tolerate extracellular freezing from -11.3 to -20 °C. Leaves of species with more rigid cell walls (higher bulk elastic modulus) could survive freezing to lower subzero temperatures, suggesting that rigid cell walls potentially reduce the degree of physical injury to cell membranes during the extracellular freezing and/or thaw processes. In conclusion, our results reveal the temporal-spatial ice spreading pattern (from stem to leaves) in Patagonian shrubs, and indicate the role of xylem vessel size in determining supercooling capacity and the role of cell wall elasticity in determining leaf tolerance of extracellular ice formation. © The Author 2016. Published by Oxford University Press. All rights reserved. For Permissions, please email: journals.permissions@oup.com.

  2. A meta-analysis of leaf nitrogen distribution within plant canopies

    NARCIS (Netherlands)

    Hikosaka, Kouki; Anten, Niels P.R.; Borjigidai, Almaz; Kamiyama, Chiho; Sakai, Hidemitsu; Hasegawa, Toshihiro; Oikawa, Shimpei; Iio, Atsuhiro; Watanabe, Makoto; Koike, Takayoshi; Nishina, Kazuya; Ito, Akihiko

    2016-01-01

    Background and aims Leaf nitrogen distribution in the plant canopy is an important determinant for canopy photosynthesis. Although the gradient of leaf nitrogen is formed along light gradients in the canopy, its quantitative variations among species and environmental responses remain unknown.

  3. Large eddy simulation of the atmospheric boundary layer above a forest canopy

    Science.gov (United States)

    Alam, Jahrul

    2017-11-01

    A goal of this talk is to discuss large eddy simulation (LES) of atmospheric turbulence within and above a canopy/roughness sublayer, where coherent turbulence resembles a turbulent mixing layer. The proposed LES does not resolve the near wall region. Instead, a near surface canopy stress model has been combined with a wall adapting local eddy viscosity model. The canopy stress is represented as a three-dimensional time dependent momentum sink, where the total kinematic drag of the canopy is adjusted based on the measurements in a forest canopy. This LES has been employed to analyze turbulence structures in the canopy/roughness sublayer. Results indicate that turbulence is more efficient at transporting momentum and scalars in the roughness sublayer. The LES result has been compared with the turbulence profile measured over a forest canopy to predict the turbulence statistics in the inertial sublayer above the canopy. Turbulence statistics between the inertial sublayer, the canopy sublayer, and the rough-wall boundary layer have been compared to characterize whether turbulence in the canopy sublayer resembles a turbulent mixing layer or a boundary layer. The canopy turbulence is found dominated by energetic eddies much larger in scale than the individual roughness elements. Financial support from the National Science and Research Council (NSERC), Canada is acknowledged.

  4. Juvenile coho salmon growth and health in streams across an urbanization gradient

    Science.gov (United States)

    Spanjer, Andrew R.; Moran, Patrick W.; Larsen, Kimberly; Wetzel, Lisa; Hansen, Adam G.; Beauchamp, David A.

    2018-01-01

    Expanding human population and urbanization alters freshwater systems through structural changes to habitat, temperature effects from increased runoff and reduced canopy cover, altered flows, and increased toxicants. Current stream assessments stop short of measuring health or condition of species utilizing these freshwater habitats and fail to link specific stressors mechanistically to the health of organisms in the stream. Juvenile fish growth integrates both external and internal conditions providing a useful indicator of habitat quality and ecosystem health. Thus, there is a need to account for ecological and environmental influences on fish growth accurately. Bioenergetics models can simulate changes in growth and consumption in response to environmental conditions and food availability to account for interactions between an organism's environmental experience and utilization of available resources. The bioenergetics approach accounts for how thermal regime, food supply, and food quality affect fish growth. This study used a bioenergetics modeling approach to evaluate the environmental factors influencing juvenile coho salmon growth among ten Pacific Northwest streams spanning an urban gradient. Urban streams tended to be warmer, have earlier emergence dates and stronger early season growth. However, fish in urban streams experienced increased stress through lower growth efficiencies, especially later in the summer as temperatures warmed, with as much as a 16.6% reduction when compared to fish from other streams. Bioenergetics modeling successfully characterized salmonid growth in small perennial streams as part of a more extensive monitoring program and provides a powerful assessment tool for characterizing mixed life-stage specific responses in urban streams.

  5. Mechanistic study of aerosol dry deposition on vegetated canopies

    International Nuclear Information System (INIS)

    Petroff, A.

    2005-04-01

    The dry deposition of aerosols onto vegetated canopies is modelled through a mechanistic approach. The interaction between aerosols and vegetation is first formulated by using a set of parameters, which are defined at the local scale of one surface. The overall deposition is then deduced at the canopy scale through an up-scaling procedure based on the statistic distribution parameters. This model takes into account the canopy structural and morphological properties, and the main characteristics of the turbulent flow. Deposition mechanisms considered are Brownian diffusion, interception, initial and turbulent impaction, initially with coniferous branches and then with entire canopies of different roughness, such as grass, crop field and forest. (author)

  6. Evaluation of one dimensional analytical models for vegetation canopies

    Science.gov (United States)

    Goel, Narendra S.; Kuusk, Andres

    1992-01-01

    The SAIL model for one-dimensional homogeneous vegetation canopies has been modified to include the specular reflectance and hot spot effects. This modified model and the Nilson-Kuusk model are evaluated by comparing the reflectances given by them against those given by a radiosity-based computer model, Diana, for a set of canopies, characterized by different leaf area index (LAI) and leaf angle distribution (LAD). It is shown that for homogeneous canopies, the analytical models are generally quite accurate in the visible region, but not in the infrared region. For architecturally realistic heterogeneous canopies of the type found in nature, these models fall short. These shortcomings are quantified.

  7. Canopy sink-source partitioning influences root/soil respiration in apple

    Science.gov (United States)

    The root system of plants derives all its energy from photosynthate translocated from the canopy to the root system. Canopy manipulations that alter either the rate of canopy photosynthesis or the translocation of photosynthate are expected to alter dry matter partitioning to the root system. Fiel...

  8. Low Herbivory among Targeted Reforestation Sites in the Andean Highlands of Southern Ecuador.

    Directory of Open Access Journals (Sweden)

    Marc-Oliver Adams

    Full Text Available Insect herbivory constitutes an important constraint in the viability and management of targeted reforestation sites. Focusing on young experimental stands at about 2000 m elevation in southern Ecuador, we examined foliar damage over one season as a function of tree species and habitat. Native tree species (Successional hardwood: Cedrela montana and Tabebuia chrysantha; fast-growing pioneer: Heliocarpus americanus have been planted among prevailing local landcover types (abandoned pasture, secondary shrub vegetation, and a Pinus patula plantation in 2003/4. Plantation trees were compared to conspecifics in the spontaneous undergrowth of adjacent undisturbed rainforest matched for height and foliar volume. Specifically, we tested the hypotheses that H. americanus as a pioneer species suffers more herbivory compared to the two successional tree species, and that damage is inversely related to habitat complexity. Overall leaf damage caused by folivorous insects (excluding leafcutter ants was low. Average leaf loss was highest among T. chrysantha (7.50% ± 0.19 SE of leaf area, followed by H. americanus (4.67% ± 0.18 SE and C. montana (3.18% ± 0.15 SE. Contrary to expectations, leaf area loss was highest among trees in closed-canopy natural rainforest, followed by pine plantation, pasture, and secondary shrub sites. Harvesting activity of leafcutter ants (Acromyrmex sp. was strongly biased towards T. chrysantha growing in open habitat (mean pasture: 2.5%; shrub: 10.5% where it could result in considerable damage (> 90.0%. Insect folivory is unlikely to pose a barrier for reforestation in the tropical Andean mountain forest zone at present, but leafcutter ants may become problematic if local temperatures increase in the wake of global warming.

  9. Forests of the tropical eastern Andean flank during the middle Pleistocene

    NARCIS (Netherlands)

    Cárdenas, M.L.; Gosling, W.D.; Pennington, R.T.; Poole, I.; Sherlock, S.C.; Mothes, P.

    2014-01-01

    Inter-bedded volcanic and organic sediments from Erazo (Ecuador) indicate the presence of four different forest assemblages on the eastern Andean flank during the middle Pleistocene. Radiometric dates (40Ar-39Ar) obtained from the volcanic ash indicate that deposition occurred between 620,000 and

  10. Influence of precipitation, landscape and hydrogeomorphic lake features on pelagic allochthonous indicators in two connected ultraoligotrophic lakes of North Patagonia

    International Nuclear Information System (INIS)

    Queimaliños, Claudia; Reissig, Mariana; Diéguez, María del Carmen; Arcagni, Marina; Ribeiro Guevara, Sergio; Campbell, Linda; Soto Cárdenas, Carolina; Rapacioli, Raúl

    2012-01-01

    We investigated the terrestrial influence on two chained deep ultraoligotrophic lakes of North Patagonia (Argentina) through the seasonal analysis of two pelagic allochthonous indicators: i) water color, as a proxy of allochthonous dissolved organic matter in lakes; and ii) the color to chlorophyll a ratio (Color:Chla), as an indicator of the relationship between allochthonous and autochthonous carbon pools. We also evaluated the potential transfer pathways of the allochthonous dissolved organic matter into the pelagic food webs of these deep lakes, including the natural zooplankton δ 13 C in the analysis. The dynamics of the allochthonous indicators were related to the precipitation regime, water level fluctuations, and hydrogeomorphic and catchment features of lakes Moreno East and Moreno West. The water color (absorbance at 440 nm) was extremely low ( −1 ) in both lakes regardless of the season. However, precipitation and snowmelt regimes drove the increase and decrease of water color, respectively. A significant positive relationship between the zooplankton bulk δ 13 C with the water color would suggest an input of allochthonous organic carbon into the pelagic consumers. The incorporation of the dissolved allochthonous material into higher trophic levels is likely favored by the bacterivorous behavior of planktonic organisms, mixotrophic flagellates and ciliates, which dominate the pelagic food webs of these Patagonian lakes. Morphometric aspects, mainly the higher water residence time, led to lower values of allochthony in Moreno East compared to Moreno West, probably accentuated by its upper position in the lake chain. Overall, our results suggest that these allochthonous signals can bring insight into the magnitude of the interaction between terrestrial environments and lake ecosystems, even in extremely clear and ultraoligotrophic systems, such as the Andean Patagonian lakes. - Highlights: ► Pelagic allochthonous indicators were detected in two

  11. Simulated transient thermal infrared emissions of forest canopies during rainfall events

    Science.gov (United States)

    Ballard, Jerrell R.; Hawkins, William R.; Howington, Stacy E.; Kala, Raju V.

    2017-05-01

    We describe the development of a centimeter-scale resolution simulation framework for a theoretical tree canopy that includes rainfall deposition, evaporation, and thermal infrared emittance. Rainfall is simulated as discrete raindrops with specified rate. The individual droplets will either fall through the canopy and intersect the ground; adhere to a leaf; bounce or shatter on impact with a leaf resulting in smaller droplets that are propagated through the canopy. Surface physical temperatures are individually determined by surface water evaporation, spatially varying within canopy wind velocities, solar radiation, and water vapor pressure. Results are validated by theoretical canopy gap and gross rainfall interception models.

  12. Rotor Systems Research Aircraft /RSRA/ canopy explosive severance/fracture

    Science.gov (United States)

    Bement, L. J.

    1976-01-01

    The Rotor Systems Research Aircraft (RSRA), a compound rotor/fixed-wing aircraft, incorporates an emergency escape system for the three crew members; to achieve unobstructed egress, the overhead acrylic canopies of each crew member will be explosively severed and fractured into predictably small, low-mass pieces. A canopy explosive severance/fracture system was developed under this investigation that included the following system design considerations: selection of canopy and explosive materials, determining the acrylic's explosive severance and fracture characteristics, evaluating the effects of installation variables and temperature, determining the most effective explosive patterns, conducting full-scale, flat and double-curvature canopy tests, and evaluating the effects of back-blast of the explosive into the cockpit.

  13. Tropical Andean ecosystems and the need to keep warming limits below a +1.5°C threshold

    Science.gov (United States)

    Ruiz-Carrascal, D.; Herzog, S. K.; Guitierrez Lagoueyte, M. E.; Gonzalez-Duque, D.; Cuevas-Moreno, J.; del Valle, J. I.; Andreu-Hayles, L.; Herrera, D. A.; Martínez, R.

    2017-12-01

    Long-term climate change and rapid land-use change are synergistically threatening the integrity and functioning of tropical Andean ecosystems. The main goal of our research was to integrate climate change projections, biodiversity data and anthropogenically driven ecosystem disruption assessments to quantify the vulnerability of Andean ecosystems and species to global change at a local scale. We merged discernible trends in local quality-controlled weather station data with reanalysis data, as well as with historical and prospective simulation outputs of five well-known GCMs to assess a long-term context for the analysis of climate change exposure (temperature severity intervals). Individual, medium-term, multi-member GCM simulations included: altitude-corrected 2046-2065 (IPCC-AR4) climate change scenarios for the A1B emission scenario; and spatially-downscaled 2040-2069 (IPCC-AR5) projections for the RCP4.5. Previous studies reported mean annual temperature anomaly intervals that resulted in exceedingly high thresholds: the lowest severity interval ( +2.71°C). The least severe interval extended up to the threshold widely recognized as `dangerous' climate change, thereby leading to an underestimation of the true vulnerability of Andean species. Our analyses suggest that temperature anomalies for the full extent of the tropical Andes will likely range from low ( +2.61°C), exceeding the threshold of 'natural' climate variability (+1.78°C). Our results suggest that most species that were used as proxies of ecosystem vulnerabilities will likely experience overall low-to-medium-to-high temperature increases. Since many of them have potentially high sensitivity to such long-term changes, Andean species will likely experience greatly increases in vulnerability. The already-disrupted Andean ecosystems will suffer a further climatic stress, which will worsen the well-known detrimental synergies between climate and land-use changes. There is an imperative need to

  14. Relationships between NDVI, canopy structure, and photosynthesis in three California vegetation types

    International Nuclear Information System (INIS)

    Gamon, J.A.; Field, C.B.; Goulden, M.L.; Griffin, K.L.; Hartley, A.E.; Joel, G.; Penuelas, J.; Valentini, R.

    1995-01-01

    In a range of plant species from three Californian vegetation types, we examined the widely used ''normalized difference vegetation index'' (NDVI) and ''simple ratio'' (SR) as indicators of canopy structure, light absorption, and photosynthetic activity. These indices, which are derived from canopy reflectance in the red and near-infrared wavebands, highlighted phenological differences between evergreen and deciduous canopies. They were poor indicators of total canopy biomass due to the varying abundance of non-green standing biomass in these vegetation types. However, in sparse canopies (leaf area index (LAI) apprxeq 0-2), NDVI was a sensitive indicator of canopy structure and chemical content (green biomass, green leaf area index, chlorophyll content, and foliar nitrogen content). At higher canopy green LAI values ( gt 2; typical of dense shrubs and trees), NDVI was relatively insensitive to changes in canopy structure. Compared to SR, NDVI was better correlated with indicators of canopy structure and chemical content, but was equivalent to the logarithm of SR. In agreement with theoretical expectations, both NDVI and SR exhibited near-linear correlations with fractional PAR intercepted by green leaves over a wide range of canopy densities. Maximum daily photosynthetic rates were positively correlated with NDVI and SR in annual grassland and semideciduous shrubs where canopy development and photosynthetic activity were in synchrony. The indices were also correlated with peak springtime canopy photosynthetic rates in evergreens. However, over most of the year, these indices were poor predictors of photosynthetic performance in evergreen species due to seasonal reductions in photosynthetic radiation-use efficiency that occurred without substantial declines in canopy greenness. Our results support the use of these vegetation indices as remote indicators of PAR absorption, and thus potential photosynthetic activity, even in

  15. Andean rural children's views of the environment: A qualitative study

    Science.gov (United States)

    Maurial, Mahia

    Andean rural children's drawings and narratives about their crops and the immediate biological environment are rich tools to understand local views of the environment. Children's drawings and narratives were collected and linked to interviews as well as participant observation gathered from parents, leaders and teachers. The research sites are the community of Willca and the school of Mayu. Fieldwork was completed in 1998. In the conceptual framework I distinguish between two dissimilar knowledges, school knowledge and local knowledge. These knowledges produce two dissimilar views of the environment. I further analyze relationships of knowledge and power and argue that school knowledge overpowers local knowledge. Concomitantly, I studied set of ideas associated with two knowledges aforementioned: superacion (surpass) and regeneration (Apffel-Marglin 1995). Although these ideas coexist in peoples' minds they are not linked or effectively connected. In order to link local knowledge and school knowledge together, I propose the integration of environmental studies and art education to enhance a local sense of place (Blandy et. al 1993) in Andean and other schools. This will contribute to grassroots educational policy.

  16. NLCD 2001 - Tree Canopy

    Data.gov (United States)

    Minnesota Department of Natural Resources — The National Land Cover Database 2001 tree canopy layer for Minnesota (mapping zones 39-42, 50-51) was produced through a cooperative project conducted by the...

  17. 78 FR 15031 - Agency Information Collection Activities: Andean Trade Preferences Act

    Science.gov (United States)

    2013-03-08

    ... Management and Budget (OMB) approval. All comments will become a matter of public record. In this document..., Andean Trade Promotion and Drug Eradication Act (ATPDEA) Certificate of Origin. This form can be used... 17. Type of Review: Extension (without change). Affected Public: Businesses. ATPA Certificate of...

  18. A radiosity model for heterogeneous canopies in remote sensing

    Science.gov (United States)

    GarcíA-Haro, F. J.; Gilabert, M. A.; Meliá, J.

    1999-05-01

    A radiosity model has been developed to compute bidirectional reflectance from a heterogeneous canopy approximated by an arbitrary configuration of plants or clumps of vegetation, placed on the ground surface in a prescribed manner. Plants are treated as porous cylinders formed by aggregations of layers of leaves. This model explicitly computes solar radiation leaving each individual surface, taking into account multiple scattering processes between leaves and soil, and occlusion of neighboring plants. Canopy structural parameters adopted in this study have served to simplify the computation of the geometric factors of the radiosity equation, and thus this model has enabled us to simulate multispectral images of vegetation scenes. Simulated images have shown to be valuable approximations of satellite data, and then a sensitivity analysis to the dominant parameters of discontinuous canopies (plant density, leaf area index (LAI), leaf angle distribution (LAD), plant dimensions, soil optical properties, etc.) and scene (sun/ view angles and atmospheric conditions) has been undertaken. The radiosity model has let us gain a deep insight into the radiative regime inside the canopy, showing it to be governed by occlusion of incoming irradiance, multiple scattering of radiation between canopy elements and interception of upward radiance by leaves. Results have indicated that unlike leaf distribution, other structural parameters such as LAI, LAD, and plant dimensions have a strong influence on canopy reflectance. In addition, concepts have been developed that are useful to understand the reflectance behavior of the canopy, such as an effective LAI related to leaf inclination.

  19. Quantifying interception associated with new urban vegetation canopies

    Science.gov (United States)

    Yerk, W.; Montalto, F. A.

    2013-12-01

    Interception of precipitation by vegetation canopies has long been recognized as an important component of the hydrologic cycle, though most research has been in closed or sparse canopy forests. Much less work has been published on interception by urban vegetation, and especially associated with the low growing shrubs commonly installed in green infrastructure program. To inform urban watershed model with vegetation-specific interception data, a field experiment was designed to directly measure canopy throughfall associated with two shrub species commonly included in urban greening programs. Data was collected at a high (e.g. five second) sampling frequency. A non-parametric Kruskal-Wallis test performed on data collected between August and October of 2012 demonstrated statistically significant (p= 0.0011) differences in recorded throughfall between two species (94% for Itea virginica, 86% for Cornus sericea). Additionally, the results suggested that the relationship of throughfall to rainfall intensity varied by species. For Itea, the ratio of throughfall to precipitation intensity was close to 1:1. However, for Cornus, the throughfall rate was on average slower (or 0.85 of the precipitation intensity). An improved and expanded set-up installed in 2013 added two additional species (Prunus laurocerasus and Hydrangea quercifolia). The 2013 results confirm interspecies differences in both throughfall amount, and in the relationship of throughfall rate to precipitation intensity. The results are discussed with respect to droplet splashing and enhanced evaporation within the canopy. Both years' findings suggest that the quantity of water intercepted by vegetation canopies exceeds the canopy storage capacity, as assumed in many conventional hydrologic models.

  20. Diversity and ecological ranges of plant species from dry inter-Andean valleys

    DEFF Research Database (Denmark)

    Quintana, Catalina

    found on steep slopes and in ravines. These areas of original dry valley vegetation preserve many wild relatives of cultivated plants on the one hand and old lineages of other wild plant groups. Dry inter-Andean valleys (DIAVs) in Ecuador therefore makeup a biodiversity hot spot for both plants......Dry valleys in the American Andes and other mountains have provided excellent agricultural lands since millennia. Besides agriculture, wood extraction and the establishment of urban areas have diminished the native vegetation of these valleys. Consequently the original vegetation is now mostly...... and animals, but unfortunately only very few botanical studies have been carried out in these areas. This thesis intends to shed light on the vegetation of the Dry Ecuadorean Inter-Andean Valleys in four chapters, each with a different focus. 1) A review paper that summarizes all scientific knowledge...

  1. Winter Radiation Extinction and Reflection in a Boreal Pine Canopy: Measurements and Modelling

    Science.gov (United States)

    Pomeroy, J. W.; Dion, K.

    1996-12-01

    Predicting the rate of snowmelt and intercepted snow sublimation in boreal forests requires an understanding of the effects of snow-covered conifers on the exchange of radiant energy. This study examined the amount of intercepted snow on a jack pine canopy in the boreal forest of central Saskatchewan and the shortwave and net radiation exchange with this canopy, to determine the effect of intercepted snow and canopy structure on shortwave radiation reflection and extinction and net radiation attenuation in a boreal forest. The study focused on clear sky conditions, which are common during winter in the continental boreal forest. Intercepted snow was found to have no influence on the clear-sky albedo of the canopy, the extinction of short wave radiation by the canopy or ratio of net radiation at the canopy top to that at the surface snow cover. Because of the low albedo of the snow-covered canopy, net radiation at the canopy top remains positive and a large potential source of energy for sublimation. The canopy albedo declines somewhat as the extinction efficiency of the underlying canopy increases. The extinction efficiency of short wave radiation in the canopy depends on solar angle because of the approximately horizontal orientation of pine branches. For low solar angles above the horizon, the extinction efficiency is quite low and short wave transmissivity through the canopy is relatively high. As the solar angle increases, extinction increases up to angles of about 50̂, and then declines. Extinction of short wave radiation in the canopy strongly influences the attenuation of net radiation by the canopy. Short wave radiation that is extinguished by branches is radiated as long wave, partly downwards to the snow cover. The ratio of net radiation at the canopy top to that at the snow cover surface increases with the extinction of short wave radiation and is negative for low extinction efficiencies. For the pine canopy examined, the daily mean net radiation at the

  2. Forest canopy BRDF simulation using Monte Carlo method

    NARCIS (Netherlands)

    Huang, J.; Wu, B.; Zeng, Y.; Tian, Y.

    2006-01-01

    Monte Carlo method is a random statistic method, which has been widely used to simulate the Bidirectional Reflectance Distribution Function (BRDF) of vegetation canopy in the field of visible remote sensing. The random process between photons and forest canopy was designed using Monte Carlo method.

  3. Proliferation of hydroelectric dams in the Andean Amazon and implications for Andes-Amazon connectivity.

    Science.gov (United States)

    Finer, Matt; Jenkins, Clinton N

    2012-01-01

    Due to rising energy demands and abundant untapped potential, hydropower projects are rapidly increasing in the Neotropics. This is especially true in the wet and rugged Andean Amazon, where regional governments are prioritizing new hydroelectric dams as the centerpiece of long-term energy plans. However, the current planning for hydropower lacks adequate regional and basin-scale assessment of potential ecological impacts. This lack of strategic planning is particularly problematic given the intimate link between the Andes and Amazonian flood plain, together one of the most species rich zones on Earth. We examined the potential ecological impacts, in terms of river connectivity and forest loss, of the planned proliferation of hydroelectric dams across all Andean tributaries of the Amazon River. Considering data on the full portfolios of existing and planned dams, along with data on roads and transmission line systems, we developed a new conceptual framework to estimate the relative impacts of all planned dams. There are plans for 151 new dams greater than 2 MW over the next 20 years, more than a 300% increase. These dams would include five of the six major Andean tributaries of the Amazon. Our ecological impact analysis classified 47% of the potential new dams as high impact and just 19% as low impact. Sixty percent of the dams would cause the first major break in connectivity between protected Andean headwaters and the lowland Amazon. More than 80% would drive deforestation due to new roads, transmission lines, or inundation. We conclude with a discussion of three major policy implications of these findings. 1) There is a critical need for further strategic regional and basin scale evaluation of dams. 2) There is an urgent need for a strategic plan to maintain Andes-Amazon connectivity. 3) Reconsideration of hydropower as a low-impact energy source in the Neotropics.

  4. Proliferation of hydroelectric dams in the Andean Amazon and implications for Andes-Amazon connectivity.

    Directory of Open Access Journals (Sweden)

    Matt Finer

    Full Text Available Due to rising energy demands and abundant untapped potential, hydropower projects are rapidly increasing in the Neotropics. This is especially true in the wet and rugged Andean Amazon, where regional governments are prioritizing new hydroelectric dams as the centerpiece of long-term energy plans. However, the current planning for hydropower lacks adequate regional and basin-scale assessment of potential ecological impacts. This lack of strategic planning is particularly problematic given the intimate link between the Andes and Amazonian flood plain, together one of the most species rich zones on Earth. We examined the potential ecological impacts, in terms of river connectivity and forest loss, of the planned proliferation of hydroelectric dams across all Andean tributaries of the Amazon River. Considering data on the full portfolios of existing and planned dams, along with data on roads and transmission line systems, we developed a new conceptual framework to estimate the relative impacts of all planned dams. There are plans for 151 new dams greater than 2 MW over the next 20 years, more than a 300% increase. These dams would include five of the six major Andean tributaries of the Amazon. Our ecological impact analysis classified 47% of the potential new dams as high impact and just 19% as low impact. Sixty percent of the dams would cause the first major break in connectivity between protected Andean headwaters and the lowland Amazon. More than 80% would drive deforestation due to new roads, transmission lines, or inundation. We conclude with a discussion of three major policy implications of these findings. 1 There is a critical need for further strategic regional and basin scale evaluation of dams. 2 There is an urgent need for a strategic plan to maintain Andes-Amazon connectivity. 3 Reconsideration of hydropower as a low-impact energy source in the Neotropics.

  5. Proposing a Digital Information System for the Management and Conservation of the Qhapaq ÑAN - Andean Road System

    Science.gov (United States)

    Duperré, G. N.

    2017-08-01

    The ancient network of roads in the Andean region is one of the most important works of infrastructure in South America. The extensive territory where the main exchanges between their communities were locally performed is previous to the expansion of the Inca Empire. In the year 2014, the region was included on the World Heritage List by the United Nations Educational, Scientific and Cultural Organization. This communication network is the Qhapaq Ñan, Andean Road System. The Incas planned their route in the diverse landscape of the Andes to promote social and economic ties among the Andean communities. The routes originated in the central square of Cusco, creating cross-connections in a wide geographical area. The Tawantinsuyu depended on this sole route to link very distant production and worship centers. The Qhapaq Ñan was the result of a political project. Even nowadays, it continues to articulate the development of cultural traditions in the Andean region. The present contribution analyzes its transcendental importance as a Cultural Heritage and the singularity of its nomination by the UNESCO, as for the first time six countries are sharing common objectives towards guaranteeing its protection. Furthermore, this research explores the sense of timing in Latin American countries and the implicit challenges in the implementation of the new information technologies for the dissemination of information on Main Andean Road and for its conservation. Although many of the countries have already incorporated the necessary digital tools in this matter, we conclude that there is a need to implement an Integrated Digital Model for the coordinated management in the countries that form the region.

  6. Andean settlers rush for Amazonia.

    Science.gov (United States)

    Serra-vega, J

    1990-01-01

    Governments of Andean countries (Peru, Bolivia, Colombia, Ecuador, and Venezuela) have encouraged migration to the Amazon Basin, which has contributed to its destruction. Population pressure, landlessness, and poverty are the inducements to migrate. Efforts to populate the Amazon forest were begun as early as 1964 in Peru without international notice. By 1980, logging was allowed in Peru, and Brazil considered colonization of the Amazon essential to national sovereignty. By 1986, outside of Lima, Peru, a development project originally funded by the World Bank, the InterAmerican Development Bank, and the US, resulted in conflicts between settlers and Indians, in loggers indiscriminately cutting, and in farmers using slash and burn techniques to clear forests. Elsewhere the Peruvian Amazon, in San Ignacio, the population was growing by 5.5%/year. The jungle road that had been started but never completed, Carretera Marginal, destroyed 5 million hectares of primary forest, and much of the 600,000 hectares of arable land gained by the road suffered from inappropriate farming practices which caused massive erosion and laterization of the soils. Food crop production declined, and production of coca for cocaine increased. Coca crops are controlled by the Shining Path guerrillas, who are trying to overthrow the Peruvian government. Devastation of Ecuador around Lago Agrio continues. In Colombia, east of Bogota, forests have disappeared and hills have eroded and silted up rivers and dams. The Andean piedmont in Bolivia has also been devastated by loggers and by slash and burn farming. Southeastern Bolivian forests have been cleared for soya bean cultivation on poor soils. Social and economic crises propel people into the remaining forests. The solution is to ease foreign debt, transfer appropriate technology at affordable prices, refuse to finance destructive development, and help to educate and train scientific researchers. Family planning services are also urgently needed

  7. Natural Selection on Genes Related to Cardiovascular Health in High-Altitude Adapted Andeans.

    Science.gov (United States)

    Crawford, Jacob E; Amaru, Ricardo; Song, Jihyun; Julian, Colleen G; Racimo, Fernando; Cheng, Jade Yu; Guo, Xiuqing; Yao, Jie; Ambale-Venkatesh, Bharath; Lima, João A; Rotter, Jerome I; Stehlik, Josef; Moore, Lorna G; Prchal, Josef T; Nielsen, Rasmus

    2017-11-02

    The increase in red blood cell mass (polycythemia) due to the reduced oxygen availability (hypoxia) of residence at high altitude or other conditions is generally thought to be beneficial in terms of increasing tissue oxygen supply. However, the extreme polycythemia and accompanying increased mortality due to heart failure in chronic mountain sickness most likely reduces fitness. Tibetan highlanders have adapted to high altitude, possibly in part via the selection of genetic variants associated with reduced polycythemic response to hypoxia. In contrast, high-altitude-adapted Quechua- and Aymara-speaking inhabitants of the Andean Altiplano are not protected from high-altitude polycythemia in the same way, yet they exhibit other adaptive features for which the genetic underpinnings remain obscure. Here, we used whole-genome sequencing to scan high-altitude Andeans for signals of selection. The genes showing the strongest evidence of selection-including BRINP3, NOS2, and TBX5-are associated with cardiovascular development and function but are not in the response-to-hypoxia pathway. Using association mapping, we demonstrated that the haplotypes under selection are associated with phenotypic variations related to cardiovascular health. We hypothesize that selection in response to hypoxia in Andeans could have vascular effects and could serve to mitigate the deleterious effects of polycythemia rather than reduce polycythemia itself. Copyright © 2017. Published by Elsevier Inc.

  8. Insights into evolution in Andean Polystichum (Dryopteridaceae) from expanded understanding of the cytosolic phosphoglucose isomerase gene.

    Science.gov (United States)

    Lyons, Brendan M; McHenry, Monique A; Barrington, David S

    2017-07-01

    Cytosolic phosphoglucose isomerase (pgiC) is an enzyme essential to glycolysis found universally in eukaryotes, but broad understanding of variation in the gene coding for pgiC is lacking for ferns. We used a substantially expanded representation of the gene for Andean species of the fern genus Polystichum to characterize pgiC in ferns relative to angiosperms, insects, and an amoebozoan; assess the impact of selection versus neutral evolutionary processes on pgiC; and explore evolutionary relationships of selected Andean species. The dataset of complete sequences comprised nine accessions representing seven species and one hybrid from the Andes and Serra do Mar. The aligned sequences of the full data set comprised 3376 base pairs (70% of the entire gene) including 17 exons and 15 introns from two central areas of the gene. The exons are highly conserved relative to angiosperms and retain substantial homology to insect pgiC, but intron length and structure are unique to the ferns. Average intron size is similar to angiosperms; intron number and location in insects are unlike those of the plants we considered. The introns included an array of indels and, in intron 7, an extensive microsatellite array with potential utility in analyzing population-level histories. Bayesian and maximum-parsimony analysis of 129 variable nucleotides in the Andean polystichums revealed that 59 (1.7% of the 3376 total) were phylogenetically informative; most of these united sister accessions. The phylogenetic trees for the Andean polystichums were incongruent with previously published cpDNA trees for the same taxa, likely the result of rapid evolutionary change in the introns and contrasting stability in the exons. The exons code a total of seven amino-acid substitutions. Comparison of non-synonymous to synonymous substitutions did not suggest that the pgiC gene is under selection in the Andes. Variation in pgiC including two additional accessions represented by incomplete sequences

  9. Co-optimal distribution of leaf nitrogen and hydraulic conductance in plant canopies.

    Science.gov (United States)

    Peltoniemi, Mikko S; Duursma, Remko A; Medlyn, Belinda E

    2012-05-01

    Leaf properties vary significantly within plant canopies, due to the strong gradient in light availability through the canopy, and the need for plants to use resources efficiently. At high light, photosynthesis is maximized when leaves have a high nitrogen content and water supply, whereas at low light leaves have a lower requirement for both nitrogen and water. Studies of the distribution of leaf nitrogen (N) within canopies have shown that, if water supply is ignored, the optimal distribution is that where N is proportional to light, but that the gradient of N in real canopies is shallower than the optimal distribution. We extend this work by considering the optimal co-allocation of nitrogen and water supply within plant canopies. We developed a simple 'toy' two-leaf canopy model and optimized the distribution of N and hydraulic conductance (K) between the two leaves. We asked whether hydraulic constraints to water supply can explain shallow N gradients in canopies. We found that the optimal N distribution within plant canopies is proportional to the light distribution only if hydraulic conductance, K, is also optimally distributed. The optimal distribution of K is that where K and N are both proportional to incident light, such that optimal K is highest to the upper canopy. If the plant is constrained in its ability to construct higher K to sun-exposed leaves, the optimal N distribution does not follow the gradient in light within canopies, but instead follows a shallower gradient. We therefore hypothesize that measured deviations from the predicted optimal distribution of N could be explained by constraints on the distribution of K within canopies. Further empirical research is required on the extent to which plants can construct optimal K distributions, and whether shallow within-canopy N distributions can be explained by sub-optimal K distributions.

  10. [Estimation of forest canopy chlorophyll content based on PROSPECT and SAIL models].

    Science.gov (United States)

    Yang, Xi-guang; Fan, Wen-yi; Yu, Ying

    2010-11-01

    The forest canopy chlorophyll content directly reflects the health and stress of forest. The accurate estimation of the forest canopy chlorophyll content is a significant foundation for researching forest ecosystem cycle models. In the present paper, the inversion of the forest canopy chlorophyll content was based on PROSPECT and SAIL models from the physical mechanism angle. First, leaf spectrum and canopy spectrum were simulated by PROSPECT and SAIL models respectively. And leaf chlorophyll content look-up-table was established for leaf chlorophyll content retrieval. Then leaf chlorophyll content was converted into canopy chlorophyll content by Leaf Area Index (LAD). Finally, canopy chlorophyll content was estimated from Hyperion image. The results indicated that the main effect bands of chlorophyll content were 400-900 nm, the simulation of leaf and canopy spectrum by PROSPECT and SAIL models fit better with the measured spectrum with 7.06% and 16.49% relative error respectively, the RMSE of LAI inversion was 0. 542 6 and the forest canopy chlorophyll content was estimated better by PROSPECT and SAIL models with precision = 77.02%.

  11. CFD modelling and wind tunnel validation of airflow through plant canopies using 3D canopy architecture

    International Nuclear Information System (INIS)

    Endalew, A. Melese; Hertog, M.; Delele, M.A.; Baetens, K.; Persoons, T.; Baelmans, M.; Ramon, H.; Nicolai, B.M.; Verboven, P.

    2009-01-01

    The efficiency of pesticide application to agricultural fields and the resulting environmental contamination highly depend on atmospheric airflow. A computational fluid dynamics (CFD) modelling of airflow within plant canopies using 3D canopy architecture was developed to understand the effect of the canopy to airflow. The model average air velocity was validated using experimental results in a wind tunnel with two artificial model trees of 24 cm height. Mean air velocities and their root mean square (RMS) values were measured on a vertical plane upstream and downstream sides of the trees in the tunnel using 2D hotwire anemometer after imposing a uniform air velocity of 10 m s -1 at the inlet. 3D virtual canopy geometries of the artificial trees were modelled and introduced into a computational fluid domain whereby airflow through the trees was simulated using Reynolds-Averaged Navier-Stokes (RANS) equations and k-ε turbulence model. There was good agreement of the average longitudinal velocity, U between the measurements and the simulation results with relative errors less than 2% for upstream and 8% for downstream sides of the trees. The accuracy of the model prediction for turbulence kinetic energy k and turbulence intensity I was acceptable within the tree height when using a roughness length (y 0 = 0.02 mm) for the surface roughness of the tree branches and by applying a source model in a porous sub-domain created around the trees. The approach was applied for full scale orchard trees in the atmospheric boundary layer (ABL) and was compared with previous approaches and works. The simulation in the ABL was made using two groups of full scale orchard trees; short (h = 3 m) with wider branching and long (h = 4 m) with narrow branching. This comparison showed good qualitative agreements on the vertical profiles of U with small local differences as expected due to the spatial disparities in tree architecture. This work was able to show airflow within and above the

  12. Competition and facilitation structure plant communities under nurse tree canopies in extremely stressful environments.

    Science.gov (United States)

    Al-Namazi, Ali A; El-Bana, Magdy I; Bonser, Stephen P

    2017-04-01

    Nurse plant facilitation in stressful environments can produce an environment with relatively low stress under its canopy. These nurse plants may produce the conditions promoting intense competition between coexisting species under the canopy, and canopies may establish stress gradients, where stress increases toward the edge of the canopy. Competition and facilitation on these stress gradients may control species distributions in the communities under canopies. We tested the following predictions: (1) interactions between understory species shift from competition to facilitation in habitats experiencing increasing stress from the center to the edge of canopy of a nurse plant, and (2) species distributions in understory communities are controlled by competitive interactions at the center of canopy, and facilitation at the edge of the canopy. We tested these predictions using a neighbor removal experiment under nurse trees growing in arid environments. Established individuals of each of four of the most common herbaceous species in the understory were used in the experiment. Two species were more frequent in the center of the canopy, and two species were more frequent at the edge of the canopy. Established individuals of each species were subjected to neighbor removal or control treatments in both canopy center and edge habitats. We found a shift from competitive to facilitative interactions from the center to the edge of the canopy. The shift in the effect of neighbors on the target species can help to explain species distributions in these canopies. Canopy-dominant species only perform well in the presence of neighbors in the edge microhabitat. Competition from canopy-dominant species can also limit the performance of edge-dominant species in the canopy microhabitat. The shift from competition to facilitation under nurse plant canopies can structure the understory communities in extremely stressful environments.

  13. Response of Boreal forest tree canopy cover to chronic gamma irradiation

    International Nuclear Information System (INIS)

    Amiro, B.D.

    1994-01-01

    A section of the Canadian Boreal forest was irradiated chronically by a point source of 137 Cs from 1973 to 1986. Tree canopy cover was measured at permanently marked locations during the pre-irradiation, irradiation and post-irradiation phases, spanning a period of two decades. The tree canopy was severely affected at dose rates greater than 10 mGy/h delivered chronically. The canopy of sensitive coniferous tree species, such as Abies balsamea and Picea Mariana, decreased at dose rates greater than 2 mGy/h, but in some cases the tree canopy was replaced by more resistant species, such as Populus tremuloides and Salix bebbiana. Effects on canopy cover could not be detected at dose rates less than 0.1 mGy/h. Even at dose rates of 5 mGy/h, the forest canopy is recovering six years after irradiation stopped. (author)

  14. Predicting tropical plant physiology from leaf and canopy spectroscopy.

    Science.gov (United States)

    Doughty, Christopher E; Asner, Gregory P; Martin, Roberta E

    2011-02-01

    A broad regional understanding of tropical forest leaf photosynthesis has long been a goal for tropical forest ecologists, but it has remained elusive due to difficult canopy access and high species diversity. Here we develop an empirical model to predict sunlit, light-saturated, tropical leaf photosynthesis using leaf and simulated canopy spectra. To develop this model, we used partial least squares (PLS) analysis on three tropical forest datasets (159 species), two in Hawaii and one at the biosphere 2 laboratory (B2L). For each species, we measured light-saturated photosynthesis (A), light and CO(2) saturated photosynthesis (A(max)), respiration (R), leaf transmittance and reflectance spectra (400-2,500 nm), leaf nitrogen, chlorophyll a and b, carotenoids, and leaf mass per area (LMA). The model best predicted A [r(2) = 0.74, root mean square error (RMSE) = 2.9 μmol m(-2) s(-1))] followed by R (r(2) = 0.48), and A(max) (r(2) = 0.47). We combined leaf reflectance and transmittance with a canopy radiative transfer model to simulate top-of-canopy reflectance and found that canopy spectra are a better predictor of A (RMSE = 2.5 ± 0.07 μmol m(-2) s(-1)) than are leaf spectra. The results indicate the potential for this technique to be used with high-fidelity imaging spectrometers to remotely sense tropical forest canopy photosynthesis.

  15. Ground-based thermal imaging of stream surface temperatures: Technique and evaluation

    Science.gov (United States)

    Bonar, Scott A.; Petre, Sally J.

    2015-01-01

    We evaluated a ground-based handheld thermal imaging system for measuring water temperatures using data from eight southwestern USA streams and rivers. We found handheld thermal imagers could provide considerably more spatial information on water temperature (for our unit one image = 19,600 individual temperature measurements) than traditional methods could supply without a prohibitive amount of effort. Furthermore, they could provide measurements of stream surface temperature almost instantaneously compared with most traditional handheld thermometers (e.g., >20 s/reading). Spatial temperature analysis is important for measurement of subtle temperature differences across waterways, and identification of warm and cold groundwater inputs. Handheld thermal imaging is less expensive and equipment intensive than airborne thermal imaging methods and is useful under riparian canopies. Disadvantages of handheld thermal imagers include their current higher expense than thermometers, their susceptibility to interference when used incorrectly, and their slightly lower accuracy than traditional temperature measurement methods. Thermal imagers can only measure surface temperature, but this usually corresponds to subsurface temperatures in well-mixed streams and rivers. Using thermal imaging in select applications, such as where spatial investigations of water temperature are needed, or in conjunction with stationary temperature data loggers or handheld electronic or liquid-in-glass thermometers to characterize stream temperatures by both time and space, could provide valuable information on stream temperature dynamics. These tools will become increasingly important to fisheries biologists as costs continue to decline.

  16. Analysis of Production and Delivery Center Hydrogen Applied to the Southern Patagonian Circuit

    Directory of Open Access Journals (Sweden)

    Maximiliano Fernando Medina

    2016-08-01

    Full Text Available The Desire department of the province of Santa Cruz, Argentina, presents the greatest potential electrolytic Hydrogen Production Country, From Three primary sources of sustainable energy: wind, solar, biomass. There, the Hydrogen Plant of Pico Truncado has capacity central production of hydrogen 100m3 of H2 / day, enough to supply 353 vehicles with hybrid fuel called HGNC, made by cutting 12% V / V of hydrogen in CNG (in situ at each station. Puerto Deseado, Fitz Roy, Caleta Olivia, Las Heras, Comodoro Rivadavia, Sarmiento and the Ancients: From the production cost, the cost of delivering hydrogen to the Southern Patagonian circuit comprised analyzed. Considering various local parameters are determined as a way of delivering more profitable virtual pipeline, with total cost of hydrogen estimated 6.5 USD / kg H2 and HGNC shipped in the station at 0.50 USD / Nm3.

  17. Organized turbulent motions in a hedgerow vineyard: effect of evolving canopy structure

    Science.gov (United States)

    Vendrame, Nadia; Tezza, Luca; Tha Paw U, Kyaw; Pitacco, Andrea

    2017-04-01

    Vegetation-atmosphere exchanges are determined by functional and structural properties of the plants together with environmental forcing. However, a fundamental aspect is the interaction of the canopy with the lower atmosphere. The vegetation deeply alters the composition and physical properties of the air flow, exchanging energy, matter and momentum with it. These processes take place in the bottom part of the atmospheric boundary layer where turbulence is the main mechanism transporting within-canopy air towards the mid- and upper atmospheric boundary layer and vice versa. Canopy turbulence is highly influenced by vegetation drag elements, determining the vertical profile of turbulent moments within the canopy. Canopies organized in rows, like vineyards, show peculiar turbulent transport dynamics. In addition, the morphological structure (phenology) of the vineyard is greatly variable seasonally, shifting from an empty canopy during vine dormancy to dense foliage in summer. The understanding of the canopy ventilation regime is related to several practical applications in vineyard management. For example, within-canopy turbulent motion is very important to predict small particles dispersion, like fungal spores, and minimize infection studying the effect on leaf wetness duration. Our study aims to follow the continuous evolution of turbulence characteristics and canopy structure during the growing season of a hedgerow vineyard, from bud break to fully developed canopy. The field experiment was conducted in a flat extensive vineyard in North-Eastern Italy, using a vertical array of five synchronous sonic anemometers within and above the canopy. Turbulent flow organization was greatly influenced by canopy structure. Turbulent coherent structures involved in momentum transport have been investigated using the classical quadrant analysis and a novel approach to identify dominant temporal scales. Momentum transport in the canopy was dominated by downward gusts showing

  18. Winter radiation extinction and reflection in a boreal pine canopy: measurements and modelling

    International Nuclear Information System (INIS)

    Pomeroy, J.W.; Dion, K.

    1996-01-01

    Predicting the rate of snow melt and intercepted snow sublimation in boreal forests requires an understanding of the effects of snow-covered conifers on the exchange of radiant energy. This study examined the amount of intercepted snow on a jack pine canopy in the boreal forest of central Saskatchewan and the shortwave and net radiation exchange with this canopy, to determine the effect of intercepted snow and canopy structure on shortwave radiation reflection and extinction and net radiation attenuation in a boreal forest. The study focused on clear sky conditions, which are common during winter in the continental boreal forest. Intercepted snow was found to have no influence on the clear-sky albedo of the canopy, the extinction of short wave radiation by the canopy or ratio of net radiation at the canopy top to that at the surface snow cover. Because of the low albedo of the snow-covered canopy, net radiation at the canopy top remains positive and a large potential source of energy for sublimation. The canopy albedo declines somewhat as the extinction efficiency of the underlying canopy increases. The extinction efficiency of short wave radiation in the canopy depends on solar angle because of the approximately horizontal orientation of pine branches. For low solar angles above the horizon, the extinction efficiency is quite low and short wave transmissivity through the canopy is relatively high. As the solar angle increases, extinction increases up to angles of about 50°, and then declines. Extinction of short wave radiation in the canopy strongly influences the attenuation of net radiation by the canopy. Short wave radiation that is extinguished by branches is radiated as long wave, partly downwards to the snow cover. The ratio of net radiation at the canopy top to that at the snow cover surface increases with the extinction of short wave radiation and is negative for low extinction efficiencies. For the pine canopy examined, the daily mean net radiation at

  19. Pathogenicity evaluation of native isolates of entomopathogenic fungí against andean weevil, Premnotrypes vorax (Hustache

    Directory of Open Access Journals (Sweden)

    Giselle Rivera

    2001-07-01

    Full Text Available The main goal of this study was pathogenicity evaluation of Beauveria bassiana and Metarhizium anisopliae native isolates, obtained from natural habitats and stocked potato, against potato andean weevil, Premnotrypes vorax (Hustache (COLEOPTERA: Curculionidae, and important potato insect pest in Colombia and other Andean countries. Patogenicity was determined by laboratory bioassays, using either reared insects or field captured insects. Insect rearing data are presented. Pathogenicity evaluation was express as mortality against time, estimating LT50 and LT90 for all the fungal isolates, and mortality against spore concentration, estimating CL50 for two selected isolates. In all cases, total mortality percentils were above 45%. Differences between reared and field captured insects were evident. According to obtained data one of the fungal isolates: B. bassiana 9770, obtained from R vorax larva (TL50: 4.7 days - 9.8 days; TL90: 14.1 days - 20.8 days; CL50:7.03 x 104spores/ml appears as a promisory fungal isolate for further studies. Out of this study, differences in the andean weevil, P. vorax, adult mortality, with regard to entomopathogenic fungal isolate and insect origin were manifest.

  20. Modeling canopy-level productivity: is the "big-leaf" simplification acceptable?

    Science.gov (United States)

    Sprintsin, M.; Chen, J. M.

    2009-05-01

    The "big-leaf" approach to calculating the carbon balance of plant canopies assumes that canopy carbon fluxes have the same relative responses to the environment as any single unshaded leaf in the upper canopy. Widely used light use efficiency models are essentially simplified versions of the big-leaf model. Despite its wide acceptance, subsequent developments in the modeling of leaf photosynthesis and measurements of canopy physiology have brought into question the assumptions behind this approach showing that big leaf approximation is inadequate for simulating canopy photosynthesis because of the additional leaf internal control on carbon assimilation and because of the non-linear response of photosynthesis on leaf nitrogen and absorbed light, and changes in leaf microenvironment with canopy depth. To avoid this problem a sunlit/shaded leaf separation approach, within which the vegetation is treated as two big leaves under different illumination conditions, is gradually replacing the "big-leaf" strategy, for applications at local and regional scales. Such separation is now widely accepted as a more accurate and physiologically based approach for modeling canopy photosynthesis. Here we compare both strategies for Gross Primary Production (GPP) modeling using the Boreal Ecosystem Productivity Simulator (BEPS) at local (tower footprint) scale for different land cover types spread over North America: two broadleaf forests (Harvard, Massachusetts and Missouri Ozark, Missouri); two coniferous forests (Howland, Maine and Old Black Spruce, Saskatchewan); Lost Creek shrubland site (Wisconsin) and Mer Bleue petland (Ontario). BEPS calculates carbon fixation by scaling Farquhar's leaf biochemical model up to canopy level with stomatal conductance estimated by a modified version of the Ball-Woodrow-Berry model. The "big-leaf" approach was parameterized using derived leaf level parameters scaled up to canopy level by means of Leaf Area Index. The influence of sunlit

  1. The Rise and Fall of Andean Empires: El Nino History Lessons.

    Science.gov (United States)

    Wright, Kenneth R.

    2000-01-01

    Provides information on El Nino and the methods for investigating ancient climate record. Traces the rise and fall of the Andean empires focusing on the climatic forces that each empire (Tiwanaku, Wari, Moche, and Inca) endured. States that modern societies should learn from the experiences of these ancient civilizations. (CMK)

  2. The subduction erosion and mantle source region contamination model of Andean arc magmatism: Isotopic evidence from igneous rocks of central Chile

    International Nuclear Information System (INIS)

    Stern, Charles R

    2001-01-01

    Continental crust may be incorporated in mantle-derived Andean magmas as these magmas rise through the crust (Hildreth and Moorbath, 1988), or alternatively, crust may be tectonically transported into the mantle by subduction of trench sediments and subduction erosion of the continental margin, and then added into the mantle source region of Andean magmas (Stern, 1991). Since the mantle has relatively low Sr, Nd, and Pb concentrations compared to continental crust, differences in the isotopic compositions of magmas erupted in different region of the Andes may be produced by relatively small differences in the amount of subducted crust added to the mantle source region of these magmas. By comparison, significantly larger amounts of crust must be assimilated by mantle-derived magmas to produce isotopic differences of similar magnitude. Therefore, constraining the process by which continental crust is incorporated in Andean magmas has important implications for understanding the chemical cycling that takes place in the Andean subduction-related magma factory. Isotopic data suggest the incorporation of a greater proportion of crust in Andean magmas erupted at the northern portion of the Southern Volcanic Zone of central Chile compared to those erupted in the southern portion of the Southern Volcanic Zone of south central Chile (SSVZ) (Stern et al., 1984; Futa and Stern, 1988; Hildreth and Moorbath, 1988). The NSVZ occurs just south of the current locus of the subduction of the Juan Fernandez Ridge. The southward migration of the locus of subduction of this ridge has resulted in decreasing subduction angle below the NSVZ, the eastward migration of the volcanic front of the Andean arc, and an increase in the crustal thickness below the arc. These factors together have caused changes, since the middle Miocene, in the isotopic composition of Andean igneous rocks of central Chile. The data indicate a close chronologic relation between the southward migrations of the locus

  3. Evaporation and the sub-canopy energy environment in a flooded forest

    Science.gov (United States)

    The combination of canopy cover and a free water surface makes the sub-canopy environment of flooded forested wetlands unlike other aquatic or terrestrial systems. The sub-canopy vapor flux and energy budget are not well understood in wetlands, but they importantly control water level and understory...

  4. Application of Lidar remote sensing to the estimation of forest canopy and stand structure

    Science.gov (United States)

    Lefsky, Michael Andrew

    A new remote sensing instrument, SLICER (Scanning Lidar Imager of Canopies by Echo Recovery), has been applied to the problem of remote sensing the canopy and stand structure of two groups of deciduous forests, Tulip Poplar-Oak stands in the vicinity of Annapolis, MD. and bottomland hardwood stands near Williamston, NC. The ability of the SLICER instrument to remotely sense the vertical distribution of canopy structure (Canopy Height Profile), bulk canopy transmittance, and several indices of canopy height has been successfully validated using twelve stands with coincident field and SLICER estimates of canopy structure. Principal components analysis has been applied to canopy height profiles from both field sites, and three significant factors were identified, each closely related to the amount of foliage in a recognizable layer of the forest, either understory, midstory, or overstory. The distribution of canopy structure to these layers is significantly correlated with the size and number of stems supporting them. The same layered structure was shown to apply to both field and SLICER remotely sensed canopy height profiles, and to apply to SLICER remotely sensed canopy profiles from both the bottomland hardwood stands in the coastal plain of North Carolina, and to mesic Tulip-Poplars stands in the upland coastal plain of Maryland. Linear regressions have demonstrated that canopy and stand structure are correlated to both a statistically significant and useful degree. Stand age and stem density is more highly correlated to stand height, while stand basal area and aboveground biomass are more closely related to a new measure of canopy structure, the quadratic mean canopy height. A geometric model of canopy structure has been shown to explain the differing relationships between canopy structure and stand basal area for stands of Eastern Deciduous Forest and Douglas Fir Forest.

  5. A New, Two-layer Canopy Module For The Detailed Snow Model SNOWPACK

    Science.gov (United States)

    Gouttevin, I.; Lehning, M.; Jonas, T.; Gustafsson, D.; Mölder, M.

    2014-12-01

    A new, two-layer canopy module with thermal inertia for the detailed snow model SNOWPACK is presented. Compared to the old, one-layered canopy formulation with no heat mass, this module now offers a level of physical detail consistent with the detailed snow and soil representation in SNOWPACK. The new canopy model is designed to reproduce the difference in thermal regimes between leafy and woody canopy elements and their impact on the underlying snowpack energy balance. The new model is validated against data from an Alpine and a boreal site. Comparisons of modelled sub-canopy thermal radiations to stand-scale observations at Alptal, Switzerland, demonstrate the improvements induced by our new parameterizations. The main effect is a more realistic simulation of the canopy night-time drop in temperatures. The lower drop is induced by both thermal inertia and the two-layer representation. A specific result is that such a performance cannot be achieved by a single-layered canopy model. The impact of the new parameterizations on the modelled dynamics of the sub-canopy snowpack is analysed and yields consistent results, but the frequent occurrence of mixed-precipitation events at Alptal prevents a conclusive assessment of model performances against snow data.Without specific tuning, the model is also able to reproduce the measured summertime tree trunk temperatures and biomass heat storage at the boreal site of Norunda, Sweden, with an increased accuracy in amplitude and phase. Overall, the SNOWPACK model with its enhanced canopy module constitutes a unique (in its physical process representation) atmosphere-to-soil-through-canopy-and-snow modelling chain.

  6. Virtual Geographic Simulation of Light Distribution within Three-Dimensional Plant Canopy Models

    Directory of Open Access Journals (Sweden)

    Liyu Tang

    2017-12-01

    Full Text Available Virtual geographic environments (VGEs have been regarded as an important new means of simulating, analyzing, and understanding complex geological processes. Plants and light are major components of the geographic environment. Light is a critical factor that affects ecological systems. In this study, we focused on simulating light transmission and distribution within a three-dimensional plant canopy model. A progressive refinement radiosity algorithm was applied to simulate the transmission and distribution of solar light within a detailed, three-dimensional (3D loquat (Eriobotrya japonica Lindl. canopy model. The canopy was described in three dimensions, and each organ surface was represented by a set of triangular facets. The form factors in radiosity were calculated using a hemi-cube algorithm. We developed a module for simulating the instantaneous light distribution within a virtual canopy, which was integrated into ParaTree. We simulated the distribution of photosynthetically active radiation (PAR within a loquat canopy, and calculated the total PAR intercepted at the whole canopy scale, as well as the mean PAR interception per unit leaf area. The ParaTree-integrated radiosity model simulates the uncollided propagation of direct solar and diffuse sky light and the light-scattering effect of foliage. The PAR captured by the whole canopy based on the radiosity is approximately 9.4% greater than that obtained using ray tracing and TURTLE methods. The latter methods do not account for the scattering among leaves in the canopy in the study, and therefore, the difference might be due to the contribution of light scattering in the foliage. The simulation result is close to Myneni’s findings, in which the light scattering within a canopy is less than 10% of the incident PAR. Our method can be employed for visualizing and analyzing the spatial distribution of light within a canopy, and for estimating the PAR interception at the organ and canopy

  7. Studies on Colombian Cryptogams VI. High Andean species of Radula (Hepaticae)

    NARCIS (Netherlands)

    Jans, Els

    1979-01-01

    This study deals with the genus Radula (Hepaticae) from the high Andean forests and paramos of Colombia, above 2500 m, and is based on the determination of Colombian collections gathered by H. Bischler and by A. M. Cleef and collaborators. A key to the 8 species known from the area is given and

  8. Characterization and Modeling of Atmospheric Flow Within and Above Plant Canopies

    Science.gov (United States)

    Souza Freire Grion, Livia

    The turbulent flow within and above plant canopies is responsible for the exchange of momentum, heat, gases and particles between vegetation and the atmosphere. Turbulence is also responsible for the mixing of air inside the canopy, playing an important role in chemical and biophysical processes occurring in the plants' environment. In the last fifty years, research has significantly advanced the understanding of and ability to model the flow field within and above the canopy, but important issues remain unsolved. In this work, we focus on (i) the estimation of turbulent mixing timescales within the canopy from field data; and (ii) the development of new computationally efficient modeling approaches for the coupled canopy-atmosphere flow field. The turbulent mixing timescale represents how quickly turbulence creates a well-mixed environment within the canopy. When the mixing timescale is much smaller than the timescale of other relevant processes (e.g. chemical reactions, deposition), the system can be assumed to be well-mixed and detailed modeling of turbulence is not critical to predict the system evolution. Conversely, if the mixing timescale is comparable or larger than the other timescales, turbulence becomes a controlling factor for the concentration of the variables involved; hence, turbulence needs to be taken into account when studying and modeling such processes. In this work, we used a combination of ozone concentration and high-frequency velocity data measured within and above the canopy in the Amazon rainforest to characterize turbulent mixing. The eddy diffusivity parameter (used as a proxy for mixing efficiency) was applied in a simple theoretical model of one-dimensional diffusion, providing an estimate of turbulent mixing timescales as a function of height within the canopy and time-of-day. Results showed that, during the day, the Amazon rainforest is characterized by well-mixed conditions with mixing timescales smaller than thirty minutes in the

  9. Social inequality and child malnutrition in four Andean countries

    OpenAIRE

    Carlos Larrea; Wilma Freire

    2002-01-01

    Objective. To analyze the effects of socioeconomic, regional, and ethnic conditions on chronic malnutrition in four Andean countries of South America: Bolivia, Colombia, Ecuador, and Peru. Methods. The study was based on Demographic and Health Surveys (DHS) for Colombia (1995), Peru (1996), and Bolivia (1997), and on a Living Standard Measurement Survey for Ecuador (1998). We developed an index of household socioeconomic status using categorical principal components analysis. We broke down th...

  10. Simulations of tropical rainforest albedo: is canopy wetness important?

    Directory of Open Access Journals (Sweden)

    Silvia N.M. Yanagi

    Full Text Available Accurate information on surface albedo is essential for climate modelling, especially for regions such as Amazonia, where the response of the regional atmospheric circulation to the changes on surface albedo is strong. Previous studies have indicated that models are still unable to correctly reproduce details of the seasonal variation of surface albedo. Therefore, it was investigated the role of canopy wetness on the simulated albedo of a tropical rainforest by modifying the IBIS canopy radiation transfer code to incorporate the effects of canopy wetness on the vegetation reflectance. In this study, simulations were run using three versions of the land surface/ecosystem model IBIS: the standard version, the same version recalibrated to fit the data of albedo on tropical rainforests and a modified version that incorporates the effects of canopy wetness on surface albedo, for three sites in the Amazon forest at hourly and monthly scales. The results demonstrated that, at the hourly time scale, the incorporation of canopy wetness on the calculations of radiative transfer substantially improves the simulations results, whereas at the monthly scale these changes do not substantially modify the simulated albedo.

  11. Whole-community facilitation regulates biodiversity on Patagonian rocky shores.

    Directory of Open Access Journals (Sweden)

    Brian R Silliman

    Full Text Available Understanding the factors that generate and maintain biodiversity is a central goal in ecology. While positive species interactions (i.e., facilitation have historically been underemphasized in ecological research, they are increasingly recognized as playing important roles in the evolution and maintenance of biodiversity. Dominant habitat-forming species (foundation species buffer environmental conditions and can therefore facilitate myriad associated species. Theory predicts that facilitation will be the dominant community-structuring force under harsh environmental conditions, where organisms depend on shelter for survival and predation is diminished. Wind-swept, arid Patagonian rocky shores are one of the most desiccating intertidal rocky shores ever studied, providing an opportunity to test this theory and elucidate the context-dependency of facilitation.Surveys across 2100 km of southern Argentinean coastline and experimental manipulations both supported theoretical predictions, with 43 out of 46 species in the animal assemblage obligated to living within the matrices of mussels for protection from potentially lethal desiccation stress and predators having no detectable impact on diversity.These results provide the first experimental support of long-standing theoretical predictions and reveal that in extreme climates, maintenance of whole-community diversity can be maintained by positive interactions that ameliorate physical stress. These findings have important conservation implications and emphasize that preserving foundation species should be a priority in remediating the biodiversity consequences of global climate change.

  12. Potential Sources of Polarized Light from a Plant Canopy

    Science.gov (United States)

    Vanderbilt, Vern; Daughtry, Craig; Dahlgren, Robert

    2016-01-01

    Field measurements have demonstrated that sunlight polarized during a first surface reflection by shiny leaves dominates the optical polarization of the light reflected by shiny-leafed plant canopies having approximately spherical leaf angle probability density functions ("Leaf Angle Distributions" - LAD). Yet for other canopies - specifically those without shiny leaves and/or spherical LADs - potential sources of optically polarized light may not always be obvious. Here we identify possible sources of polarized light within those other canopies and speculate on the ecologically important information polarization measurements of those sources might contain.

  13. AIRBORNE X-HH INCIDENCE ANGLE IMPACT ON CANOPY HEIGHT RETREIVAL: IMPLICATIONS FOR SPACEBORNE X-HH TANDEM-X GLOBAL CANOPY HEIGHT MODEL

    Directory of Open Access Journals (Sweden)

    M. L. Tighe

    2012-07-01

    Full Text Available To support international climate change mitigation efforts, the United Nations REDD+ initiative (Reducing Emissions from Deforestation and Degradation seeks to reduce land use induced greenhouse gas emissions to the atmosphere. It requires independent monitoring of forest cover and forest biomass information in a spatially explicit form. It is widely recognised that remote sensing is required to deliver this information. Synthetic Aperture Radar interferometry (InSAR techniques have gained traction in the last decade as a viable technology from which vegetation canopy height and bare earth elevations can be derived. The viewing geometry of a SAR sensor is side-looking where the radar pulse is transmitted out to one side of the aircraft or satellite, defining an incidence angle (θ range. The incidence angle will change from near-range (NR to far-range (FR across of the track of the SAR platform. InSAR uses image pairs and thus, contain two set of incidence angles. Changes in the InSAR incidence angles can alter the relative contributions from the vegetation canopy and the ground surface and thus, affect the retrieved vegetation canopy height. Incidence angle change is less pronounced in spaceborne data than in airborne data and mitigated somewhat when multiple InSAR-data takes are combined. This study uses NEXTMap® single- and multi-pass X-band HH polarized InSAR to derive vegetation canopy height from the scattering phase centre height (hspc. Comparisons with in situ vegetation canopy height over three test sites (Arizona-1, Minnesota-2; the effect of incidence angle changes across swath on the X-HH InSAR hspc was examined. Results indicate at steep incidence angles (θ = 35º, more exposure of lower vegetation canopy structure (e.g. tree trunks led to greater lower canopy double bounce, increased ground scattering, and decreased volume scattering. This resulted in a lower scattering phase centre height (hspc or a greater underestimation of

  14. PROPOSING A DIGITAL INFORMATION SYSTEM FOR THE MANAGEMENT AND CONSERVATION OF THE QHAPAQ ÑAN – ANDEAN ROAD SYSTEM

    Directory of Open Access Journals (Sweden)

    G. N. Duperré

    2017-08-01

    Full Text Available The ancient network of roads in the Andean region is one of the most important works of infrastructure in South America. The extensive territory where the main exchanges between their communities were locally performed is previous to the expansion of the Inca Empire. In the year 2014, the region was included on the World Heritage List by the United Nations Educational, Scientific and Cultural Organization. This communication network is the Qhapaq Ñan, Andean Road System. The Incas planned their route in the diverse landscape of the Andes to promote social and economic ties among the Andean communities. The routes originated in the central square of Cusco, creating cross-connections in a wide geographical area. The Tawantinsuyu depended on this sole route to link very distant production and worship centers. The Qhapaq Ñan was the result of a political project. Even nowadays, it continues to articulate the development of cultural traditions in the Andean region. The present contribution analyzes its transcendental importance as a Cultural Heritage and the singularity of its nomination by the UNESCO, as for the first time six countries are sharing common objectives towards guaranteeing its protection. Furthermore, this research explores the sense of timing in Latin American countries and the implicit challenges in the implementation of the new information technologies for the dissemination of information on Main Andean Road and for its conservation. Although many of the countries have already incorporated the necessary digital tools in this matter, we conclude that there is a need to implement an Integrated Digital Model for the coordinated management in the countries that form the region.

  15. Nondestructive, stereological estimation of canopy surface area

    DEFF Research Database (Denmark)

    Wulfsohn, Dvora-Laio; Sciortino, Marco; Aaslyng, Jesper M.

    2010-01-01

    We describe a stereological procedure to estimate the total leaf surface area of a plant canopy in vivo, and address the problem of how to predict the variance of the corresponding estimator. The procedure involves three nested systematic uniform random sampling stages: (i) selection of plants from...... a canopy using the smooth fractionator, (ii) sampling of leaves from the selected plants using the fractionator, and (iii) area estimation of the sampled leaves using point counting. We apply this procedure to estimate the total area of a chrysanthemum (Chrysanthemum morifolium L.) canopy and evaluate both...... the time required and the precision of the estimator. Furthermore, we compare the precision of point counting for three different grid intensities with that of several standard leaf area measurement techniques. Results showed that the precision of the plant leaf area estimator based on point counting...

  16. Episodic Canopy Structural Transformations and Biological Invasion in a Hawaiian Forest

    Directory of Open Access Journals (Sweden)

    Christopher S. Balzotti

    2017-07-01

    Full Text Available The remaining native forests on the Hawaiian Islands have been recognized as threatened by changing climate, increasing insect outbreak, new deadly pathogens, and growing populations of canopy structure-altering invasive species. The objective of this study was to assess long-term, net changes to upper canopy structure in sub-montane forests on the eastern slope of Mauna Kea volcano, Hawai‘i, in the context of continuing climate events, insect outbreaks, and biological invasion. We used high-resolution multi-temporal Light Detection and Ranging (LiDAR data to quantify near-decadal net changes in forest canopy height and gap distributions at a critical transition between alien invaded lowland and native sub-montane forest at the end of a recent drought and host-specific insect (Scotorythra paludicola outbreak. We found that sub-montane forests have experienced a net loss in average canopy height, and therefore structure and aboveground carbon stock. Additionally, where invasive alien tree species co-dominate with native trees, the upper canopy structure became more homogeneous. Tracking the loss of forest canopy height and spatial variation with airborne LiDAR is a cost-effective way to monitor forest canopy health, and to track and quantify ecological impacts of invasive species through space and time.

  17. Trade in Andean Condor Vulture gryphus feathers and body parts in ...

    African Journals Online (AJOL)

    body parts in the city of Cusco and the Sacred Valley,. Cusco region, Peru. Robert S. R. ... The sale of Andean Condor feathers and body parts is undertaken openly in the tourist markets of Cusco and the Sacred .... and shops. Prices in local currency – Nuevo Sol and US Dollar equivalent given in parentheses). Feather.

  18. Agronomic performance and stability of andean common bean lines with white grains in Brazil

    Directory of Open Access Journals (Sweden)

    Helton Santos Pereira

    2014-06-01

    Full Text Available This work evaluated the effect of genotype by environment interaction in Andean common bean lines with white grains, in Central Southern Brazil, to identify lines with high agronomic performance, stability and adaptability, aiming to meet domestic demand and to increase the Brazilian participation in the foreign market of common bean. Nineteen trials with twelve Andean lines were conducted in 2007, 2008 and 2009, in Central Southern Brazil. Grain yield and other agronomic traits were evaluated. Data were subjected to analysis of variance and of adaptability/stability using Annicchiarico and modified AMMI methods. Significant differences were found between lines for all traits evaluated. Genotype by environment interaction was important for lines with Andean origin and white seed. The utilization of weighted mean of absolute scores and yield with the AMMI results enabled the identification of the most stable and adapted lines. Lines Poroto Alubia, CNFB 16211, Ouro Branco and WAF 160 were stable and adapted, using both methods. CNFB 16211 line presented high agronomic performance, stability and adaptability and therefore this line may be a new cultivar. USWA 70 and WAF 75 lines presented grain size similar to that required by the foreign market and superior to the Brazilian cultivars, besides favorable agronomic traits, and thus these lines may be indicated as new cultivars.

  19. Foreland sedimentary record of Andean mountain building during advancing and retreating subduction

    Science.gov (United States)

    Horton, Brian K.

    2016-04-01

    As in many ocean-continent (Andean-type) convergent margins, the South American foreland has long-lived (>50-100 Myr) sedimentary records spanning not only protracted crustal shortening, but also periods of neutral to extensional stress conditions. A regional synthesis of Andean basin histories is complemented by new results from the Mesozoic Neuquén basin system and succeeding Cenozoic foreland system of west-central Argentina (34-36°S) showing (1) a Late Cretaceous shift from backarc extension to retroarc contraction and (2) an anomalous mid-Cenozoic (~40-20 Ma) phase of sustained nondeposition. New detrital zircon U-Pb geochronological results from Jurassic through Neogene clastic deposits constrain exhumation of the evolving Andean magmatic arc, retroarc thrust belt, foreland basement uplifts, and distal eastern craton. Abrupt changes in sediment provenance and distal-to-proximal depositional conditions can be reconciled with a complex Mesozoic-Cenozoic history of extension, post-extensional thermal subsidence, punctuated tectonic inversion involving thick- and thin-skinned shortening, alternating phases of erosion and rapid accumulation, and overlapping igneous activity. U-Pb age distributions define the depositional ages of several Cenozoic stratigraphic units and reveal a major late middle Eocene-earliest Miocene (~40-20 Ma) hiatus in the Malargüe foreland basin. This boundary marks an abrupt shift in depositional conditions and sediment sources, from Paleocene-middle Eocene distal fluviolacustrine deposition of sediments from far western volcanic sources (Andean magmatic arc) and subordinate eastern cratonic basement (Permian-Triassic Choiyoi igneous complex) to Miocene-Quaternary proximal fluvial and alluvial-fan deposition of sediments recycled from emerging western sources (Malargüe fold-thrust belt) of Mesozoic basin fill originally derived from basement and magmatic arc sources. Neogene eastward advance of the fold-thrust belt involved thick

  20. Use of AFLP and RAPD molecular genetic markers and cytogenetic analysis to explore relationships among taxa of the Patagonian Bromus setifolius complex

    Directory of Open Access Journals (Sweden)

    Ana M. García

    2009-01-01

    Full Text Available Bromus setifolius var. pictus (Hook Skottsb., B. setifolius var. setifolius Presl. and B. setifolius var. brevifolius Ness are three native Patagonian taxa in the section Pnigma Dumort of the genus Bromus L. AFLP and RAPD analysis, in conjunction with genetic distance measurements and statistical techniques, revealed variation within this group and indicated that B. setifolius var. brevifolius was closely related to B. setifolius var. pictus, with both taxa being more distantly related to B. setifolius var. setifolius. Cytogenetic analysis confirmed the chromosomal number of B. setifolius var. pictus (2n = 70 and B. setifolius var. setifolius (2n = 28 and showed for the first time that B. setifolius var. brevifolius had 2n = 70. The combination of molecular genetic and cytogenetic evidence supported a species status for two of the three taxa and suggested hypotheses for the evolutionary origin of these complex taxa. Species status was also indicated for B. setifolius var. setifolius. Based on these findings, we suggest that B. setifolius var. pictus be referred to as B. pictus Hook var. pictus, and B. setifolius var brevifolius as B. pictus Hook var brevifolius. The correlation between AFLP diversity and variation in ecological parameters suggested that this marker system could be used to assess breeding progress and to monitor the domestication of Patagonian Bromus species for agronomic use.

  1. Estimating canopy bulk density and canopy base height for conifer stands in the interior Western United States using the Forest Vegetation Simulator Fire and Fuels Extension.

    Science.gov (United States)

    Seth Ex; Frederick Smith; Tara Keyser; Stephanie Rebain

    2017-01-01

    The Forest Vegetation Simulator Fire and Fuels Extension (FFE-FVS) is often used to estimate canopy bulk density (CBD) and canopy base height (CBH), which are key indicators of crown fire hazard for conifer stands in the Western United States. Estimated CBD from FFE-FVS is calculated as the maximum 4 m running mean bulk density of predefined 0.3 m thick canopy layers (...

  2. Physico-chemical and sensory properties of marmalades made from mixtures of fruits and under-exploited Andean tubers.

    Science.gov (United States)

    Lotufo Haddad, Agustina M; Margalef, María Isabel; Armada, Margarita; Goldner, María Cristina

    2017-09-01

    This work studies the added value to the Andean tuber crops through the production of jams. The objective were: (1) to study the sensory and instrumental characteristics of dietetic marmalades made with fruits and Andean tubers; (2) to research consumer's acceptability and emotional responses; (3) to assess the relationship between sensory and instrumental variables and (4) to determine sensory, instrumental and emotional variables that influence the acceptability. Pearson's correlations showed that spreadability was the variable better predicted by sensory and instrumental ones. The analysis of variance showed that sourness increased with the increase of strawberry and the decrease of apple contents (P analysis of sensory/acceptability/emotion data, 'typical', 'autochthonous', 'urban' and 'present' resulted in positive emotions which favored the consumer liking. Formulating marmalades with mixtures of fruits and Andean tubers will allow giving value-added to these crops. The elaboration of products using innovative raw materials will be an incentive for farmers to cultivate them. © 2017 Society of Chemical Industry. © 2017 Society of Chemical Industry.

  3. Transitions between Andean and Amazonian centers of endemism in the radiation of some arboreal rodents

    Science.gov (United States)

    2013-01-01

    Background The tropical Andes and Amazon are among the richest regions of endemism for mammals, and each has given rise to extensive in situ radiations. Various animal lineages have radiated ex situ after colonizing one of these regions from the other: Amazonian clades of dendrobatid frogs and passerine birds may have Andean ancestry, and transitions from the Amazon to Andes may be even more common. To examine biogeographic transitions between these regions, we investigated the evolutionary history of three clades of rodents in the family Echimyidae: bamboo rats (Dactylomys-Olallamys-Kannabateomys), spiny tree-rats (Mesomys-Lonchothrix), and brush-tailed rats (Isothrix). Each clade is distributed in both the Andes and Amazonia, and is more diverse in the lowlands. We used two mitochondrial (cyt-b and 12S) and three nuclear (GHR, vWF, and RAG1) markers to reconstruct their phylogenetic relationships. Tree topologies and ancestral geographic ranges were then used to determine whether Andean forms were basal to or derived from lowland radiations. Results Four biogeographic transitions are identified among the generic radiations. The bamboo rat clade unambiguously originated in the Amazon ca. 9 Ma, followed by either one early transition to the Andes (Olallamys) and a later move to the Amazon (Dactylomys), or two later shifts to the Andes (one in each genus). The Andean species of both Dactylomys and Isothrix are sister to their lowland species, raising the possibility that highland forms colonized the Amazon Basin. However, uncertainty in their reconstructed ancestral ranges obscures the origin of these transitions. The lone Andean species of Mesomys is confidently nested within the lowland radiation, thereby indicating an Amazon-to-Andes transition ca. 2 Ma. Conclusions Differences in the timing of these biogeographic transitions do not appear to explain the different polarities of these trees. Instead, even within the radiation of a single family, both Andean and

  4. Forests and their canopies: Archievements and horizons in canopy science

    Czech Academy of Sciences Publication Activity Database

    Nakamura, A.; Kitching, R. L.; Cao, M.; Creedy, T. J.; Fayle, Tom Maurice; Freiberg, M.; Hewitt, C. N.; Itioka, T.; Koh, L. P.; Ma, K.; Malhi, Y.; Mitchell, A.; Novotný, Vojtěch; Ozanne, C. M. P.; Song, L.; Wang, H.; Ashton, L. A.

    2017-01-01

    Roč. 32, č. 6 (2017), s. 438-451 ISSN 0169-5347 R&D Projects: GA ČR(CZ) GA16-09427S; GA ČR GB14-36098G EU Projects: European Commission(XE) 669609 - Diversity6continents Institutional support: RVO:60077344 Keywords : biodiversity * canopy * cranes Subject RIV: EH - Ecology, Behaviour OBOR OECD: Ecology Impact factor: 15.268, year: 2016 http://www.sciencedirect.com/science/article/pii/S0169534717300599

  5. Canopy Dynamics in Nanoscale Ionic Materials Probed by NMR

    Science.gov (United States)

    Mirau, Peter

    2013-03-01

    Nanoscale ionic materials (NIMs) are hybrids prepared from ionically functionalized nanoparticles (NP) neutralized by oligomeric polymer counter-ions. NIMs are designed to behave as liquids under ambient conditions in the absence of solvent and have no volatile organic content, making them useful for a number of applications. We have used NMR relaxation and pulse-field gradient NMR to probe local and collective canopy dynamics in NIMs based on silica nanoparticles (NP), fullerols and proteins in order to understand the relationship between the core and canopy structure and the bulk properties. The NMR studies show that the canopy dynamics depend on the degree of neutralization, the canopy radius of gyration and molecular crowding at the ionically modified NP surface. The viscosity in NIMs can be directly controlled with the addition of ions that enhance the exchange rate for polymers at the NP surface. These results show that NIMs for many applications can be prepared by controlling the dynamics of the NP interface.

  6. On the Relationship of Dynamic Forearc Processes in Southern Peru to the Development and Preservation of Andean Topography

    Science.gov (United States)

    Hall, S. R.; Farber, D. L.; Audin, L.; Saillard, M.; Finkel, R. C.

    2008-12-01

    After more than 40 years of study, the timing and nature of Andean uplift remains an area of great scientific debate. The forearc of the Andean margin is of particular neotectonic interest, as previous models of Andean orogenesis attributed little-no Neogene deformation to the western margin of Altiplano. However, using the combination of remote sensing with high-resolution data, in situ cosmogenic isotope concentrations and thermochronology, in recent years the community has made important advances in addressing the rates, timings, styles, and locations of active deformation within the forearc of the Andean margin. To first order, we find that - both in terms of tectonics and climate - since 10Ma, the Andean forearc has been quite a dynamic region. Neotectonic studies in this region have been facilitated by the high degree of geomorphic surface preservation that the hyperarid (for at least the last 3My) coastal Atacama Desert has provided. Specifically, in southern Peru (14°-18°S), vast pediment surfaces have been abandoned through incision along the major river drainages that carve the deep canyons into the Precordillera and Western Cordillera. While the exact timing of the periods of more intense incision plausibly correspond with climate events, the total amount of incision integrated over many climate cycles is a useful indicator of tectonic activity. In this region, we find a number of geomorphic and structural features that provide strong evidence for distributed crustal deformation along range-sub-parallel contractile and strike-slip structures. Specifically, we see 1) ancient surfaces reflecting erosion rates as low as chronologies, and 6) Pleistocene mass-wasting events accommodating the redistribution of ~109-1010 m3 of material per event. Furthermore, the observation that Pleistocene incision rates are comparable with Late Miocene and Pliocene rates, suggests to us, that the rates and style of surface uplift within the forearc of southern Peru has

  7. Simulation of ICESat-2 canopy height retrievals for different ecosystems

    Science.gov (United States)

    Neuenschwander, A. L.

    2016-12-01

    Slated for launch in late 2017 (or early 2018), the ICESat-2 satellite will provide a global distribution of geodetic measurements from a space-based laser altimeter of both the terrain surface and relative canopy heights which will provide a significant benefit to society through a variety of applications ranging from improved global digital terrain models to producing distribution of above ground vegetation structure. The ATLAS instrument designed for ICESat-2, will utilize a different technology than what is found on most laser mapping systems. The photon counting technology of the ATLAS instrument onboard ICESat-2 will record the arrival time associated with a single photon detection. That detection can occur anywhere within the vertical distribution of the reflected signal, that is, anywhere within the vertical distribution of the canopy. This uncertainty of where the photon will be returned from within the vegetation layer is referred to as the vertical sampling error. Preliminary simulation studies to estimate vertical sampling error have been conducted for several ecosystems including woodland savanna, montane conifers, temperate hardwoods, tropical forest, and boreal forest. The results from these simulations indicate that the canopy heights reported on the ATL08 data product will underestimate the top canopy height in the range of 1 - 4 m. Although simulation results indicate the ICESat-2 will underestimate top canopy height, there is, however, a strong correlation between ICESat-2 heights and relative canopy height metrics (e.g. RH75, RH90). In tropical forest, simulation results indicate the ICESat-2 height correlates strongly with RH90. Similarly, in temperate broadleaf forest, the simulated ICESat-2 heights were also strongly correlated with RH90. In boreal forest, the simulated ICESat-2 heights are strongly correlated with RH75 heights. It is hypothesized that the correlations between simulated ICESat-2 heights and canopy height metrics are a

  8. Soil carbon estimation from eucalyptus grandis using canopy spectra

    African Journals Online (AJOL)

    Mapping soil fertility parameters, such as soil carbon (C), is fundamentally important for forest management and research related to forest growth and climate change. This study seeks to establish the link between Eucalyptus grandis canopy spectra and soil carbon using raw and continuum-removed spectra. Canopy-level ...

  9. Chlorophyll Can Be Reduced in Crop Canopies with Little Penalty to Photosynthesis1[OPEN

    Science.gov (United States)

    Drewry, Darren T.; VanLoocke, Andy; Cho, Young B.

    2018-01-01

    The hypothesis that reducing chlorophyll content (Chl) can increase canopy photosynthesis in soybeans was tested using an advanced model of canopy photosynthesis. The relationship among leaf Chl, leaf optical properties, and photosynthetic biochemical capacity was measured in 67 soybean (Glycine max) accessions showing large variation in leaf Chl. These relationships were integrated into a biophysical model of canopy-scale photosynthesis to simulate the intercanopy light environment and carbon assimilation capacity of canopies with wild type, a Chl-deficient mutant (Y11y11), and 67 other mutants spanning the extremes of Chl to quantify the impact of variation in leaf-level Chl on canopy-scale photosynthetic assimilation and identify possible opportunities for improving canopy photosynthesis through Chl reduction. These simulations demonstrate that canopy photosynthesis should not increase with Chl reduction due to increases in leaf reflectance and nonoptimal distribution of canopy nitrogen. However, similar rates of canopy photosynthesis can be maintained with a 9% savings in leaf nitrogen resulting from decreased Chl. Additionally, analysis of these simulations indicate that the inability of Chl reductions to increase photosynthesis arises primarily from the connection between Chl and leaf reflectance and secondarily from the mismatch between the vertical distribution of leaf nitrogen and the light absorption profile. These simulations suggest that future work should explore the possibility of using reduced Chl to improve canopy performance by adapting the distribution of the “saved” nitrogen within the canopy to take greater advantage of the more deeply penetrating light. PMID:29061904

  10. Landscape-scale changes in forest canopy structure across a partially logged tropical peat swamp

    Science.gov (United States)

    Wedeux, B. M. M.; Coomes, D. A.

    2015-11-01

    Forest canopy structure is strongly influenced by environmental factors and disturbance, and in turn influences key ecosystem processes including productivity, evapotranspiration and habitat availability. In tropical forests increasingly modified by human activities, the interplay between environmental factors and disturbance legacies on forest canopy structure across landscapes is practically unexplored. We used airborne laser scanning (ALS) data to measure the canopy of old-growth and selectively logged peat swamp forest across a peat dome in Central Kalimantan, Indonesia, and quantified how canopy structure metrics varied with peat depth and under logging. Several million canopy gaps in different height cross-sections of the canopy were measured in 100 plots of 1 km2 spanning the peat dome, allowing us to describe canopy structure with seven metrics. Old-growth forest became shorter and had simpler vertical canopy profiles on deeper peat, consistent with previous work linking deep peat to stunted tree growth. Gap size frequency distributions (GSFDs) indicated fewer and smaller canopy gaps on the deeper peat (i.e. the scaling exponent of Pareto functions increased from 1.76 to 3.76 with peat depth). Areas subjected to concessionary logging until 2000, and illegal logging since then, had the same canopy top height as old-growth forest, indicating the persistence of some large trees, but mean canopy height was significantly reduced. With logging, the total area of canopy gaps increased and the GSFD scaling exponent was reduced. Logging effects were most evident on the deepest peat, where nutrient depletion and waterlogged conditions restrain tree growth and recovery. A tight relationship exists between canopy structure and peat depth gradient within the old-growth tropical peat swamp forest. This relationship breaks down after selective logging, with canopy structural recovery, as observed by ALS, modulated by environmental conditions. These findings improve our

  11. Four things we don't know about scalar transfer from plant canopies

    Science.gov (United States)

    Finnigan, J. J.

    2009-04-01

    In terrestrial plant canopies, turbulent exchange of water through evapotranspiration is intimately bound up with exchange of other scalars, heat and carbon dioxide in particular. Turbulent transport is rarely the process limiting exchange of these scalars between the biosphere and the atmosphere. However, in measurement programs like FLUXNET or when we parameterise surface exchange at the canopy scale in climate or weather models we must understand the mechanism of turbulent exchange in detail. In this talk we survey four current obstacles to extending our understanding of canopy turbulence from the idealised case of homogeneous flow in neutral stratification to complex flows in stable and unstable conditions. 1. Canopy eddy structure and the hydrodynamic instability Recent analysis of canopy LES and wind tunnel simulations has revealed the ‘two hairpin' structure of a characteristic canopy eddy. This structure explains a large body of results from a wide range of canopies and redefines the Roughness Sub Layer (RSL) as an asymptotic layer similar to the logarithmic and outer layers of the Planetary Boundary Layer. However, the nature of the non-linear ‘mixing-layer' instability process that gives canopy/RSL eddies their coherence and enhanced transport efficiency (as compared to eddies in the logarithmic layer above) is poorly understood so we do not know how resilient this instability and the eddies that depend upon it are to large scale flow perturbations or to changes in stability. 2. Turbulent Schmidt and Prandtl Numbers The scalar RSL can be defined as the layer across which the turbulent Schmidt (Sc) and Prandtl (Pr) numbers in neutral stratification change from their canopy top values of ~0.5, typical of mixing layers, to their logarithmic layer values of ~1.0, typical of boundary layers. The value of Sc or Pr is a critical parameter when adjusting Monin-Obukhov similarity theory (MOST) for the proximity of the canopy. The need for such adjustments has

  12. High-Resolution Forest Canopy Height Estimation in an African Blue Carbon Ecosystem

    Science.gov (United States)

    Lagomasino, David; Fatoyinbo, Temilola; Lee, Seung-Kuk; Simard, Marc

    2015-01-01

    Mangrove forests are one of the most productive and carbon dense ecosystems that are only found at tidally inundated coastal areas. Forest canopy height is an important measure for modeling carbon and biomass dynamics, as well as land cover change. By taking advantage of the flat terrain and dense canopy cover, the present study derived digital surface models (DSMs) using stereophotogrammetric techniques on high-resolution spaceborne imagery (HRSI) for southern Mozambique. A mean-weighted ground surface elevation factor was subtracted from the HRSI DSM to accurately estimate the canopy height in mangrove forests in southern Mozambique. The mean and H100 tree height measured in both the field and with the digital canopy model provided the most accurate results with a vertical error of 1.18-1.84 m, respectively. Distinct patterns were identified in the HRSI canopy height map that could not be discerned from coarse shuttle radar topography mission canopy maps even though the mode and distribution of canopy heights were similar over the same area. Through further investigation, HRSI DSMs have the potential of providing a new type of three-dimensional dataset that could serve as calibration/validation data for other DSMs generated from spaceborne datasets with much larger global coverage. HSRI DSMs could be used in lieu of Lidar acquisitions for canopy height and forest biomass estimation, and be combined with passive optical data to improve land cover classifications.

  13. Climate change forces new ecological states in tropical Andean lakes.

    Directory of Open Access Journals (Sweden)

    Neal Michelutti

    Full Text Available Air temperatures in the tropical Andes have risen at an accelerated rate relative to the global average over recent decades. However, the effects of climate change on Andean lakes, which are vital to sustaining regional biodiversity and serve as an important water resource to local populations, remain largely unknown. Here, we show that recent climate changes have forced alpine lakes of the equatorial Andes towards new ecological and physical states, in close synchrony to the rapid shrinkage of glaciers regionally. Using dated sediment cores from three lakes in the southern Sierra of Ecuador, we record abrupt increases in the planktonic thalassiosiroid diatom Discostella stelligera from trace abundances to dominance within the phytoplankton. This unprecedented shift occurs against the backdrop of rising temperatures, changing atmospheric pressure fields, and declining wind speeds. Ecological restructuring in these lakes is linked to warming and/or enhanced water column stratification. In contrast to seasonally ice-covered Arctic and temperate alpine counterparts, aquatic production has not increased universally with warming, and has even declined in some lakes, possibly because enhanced thermal stability impedes the re-circulation of hypolimnetic nutrients to surface waters. Our results demonstrate that these lakes have already passed important ecological thresholds, with potentially far-reaching consequences for Andean water resources.

  14. Flume experiments on intermittency and zero-crossing properties of canopy turbulence

    Science.gov (United States)

    Poggi, Davide; Katul, Gabriel

    2009-06-01

    How the presence of a canopy alters the clustering and the fine scale intermittency exponents and any possible connections between them remains a vexing research problem in canopy turbulence. To begin progress on this problem, detailed flume experiments in which the longitudinal and vertical velocity time series were acquired using laser Doppler anemometry within and above a uniform canopy composed of densely arrayed rods. The time series analysis made use of the telegraphic approximation (TA) and phase-randomization (PR) methods. The TA preserved the so-called zero-crossing properties in the original turbulent velocity time series but eliminated amplitude variations, while the PR generated surrogate data that preserved the spectral scaling laws in the velocity series but randomized the acceleration statistics. Based on these experiments, it was shown that the variations in the dissipation intermittency exponents were well described by the Taylor microscale Reynolds number (Reλ) within and above the canopy. In terms of clustering, quantified here using the variance in zero-crossing density across scales, two scaling regimes emerged. For spatial scales much larger than the canopy height hc, representing the canonical scale of the vortices dominating the flow, no significant clustering was detected. For spatial scales much smaller than hc, significant clustering was discernable and follows an extensive scaling law inside the canopy. Moreover, the canopy signatures on the clustering scaling laws were weak. When repeating these clustering measures on the PR data, the results were indistinguishable from the original series. Hence, clustering exponents derived from variances in zero-crossing density across scales primarily depended on the velocity correlation function and not on the distributional properties of the acceleration. In terms of the connection between dissipation intermittency and clustering exponents, there was no significant relationship. While the former

  15. Diurnal Patterns of Direct Light Extinction in Two Tropical Forest Canopies

    Science.gov (United States)

    Cushman, K.; Silva, C. E.; Kellner, J. R.

    2016-12-01

    The extent to which net ecosystem production is light-limited in Neotropical forests is poorly understood. This is due in part to our limited knowledge of how light moves through complex canopies to different layers of leaves, and the extent to which structural changes in canopies modify the amount of light absorbed by the landscape to drive photosynthesis. Systematic diurnal changes in solar angle, leaf angle, and wind speed suggest that patterns of light attenuation change over the course of the day in tropical forests. In this study, we characterize the extinction of direct light through the canopies of two forests in Panama using high-resolution, three-dimensional measurements from a small footprint, discrete return airborne laser scanner mounted on the gondola of a canopy crane. We hypothesized that light penetrates deeper into canopies during the middle of the day because changes in leaf angle by light-saturated leaves temporarily reduce effective canopy leaf area, and because greater wind speeds increase sunflecks. Also, we hypothesized that rates of light extinction are greater in the wetter forest that receives less direct sunlight because light saturation in upper leaves is less prevalent. We collected laser measurements with resolution of approximately 5,000 points per square meter of ground every 90 minutes over the course of one day each at Parque Natural Metropolitano (1740 mm annual rainfall) and Parque Nacional San Lorenzo (3300 mm annual rainfall) during the dry season in April, 2016. Using a voxel-based approach, we compared the actual versus potential distance traveled by laser beams through each volume of the canopy. We fit an exponential model to quantify the rate of light extinction. We found that rates of light extinction vary spatially, temporally, and by site. These results indicate that variation in forest structure changes patterns of light attenuation through the canopy over multiple scales.

  16. Estimating wood volume from canopy area in deciduous woodlands ...

    African Journals Online (AJOL)

    In this study we tested the predictive ability of canopy area in estimating wood volume in deciduous woodlands of Zimbabwe. The study was carried out in four sites of different climatic conditions. We used regression analysis to statistically quantify the prediction of wood volume from canopy area at species and stand level ...

  17. Investigation into the role of canopy structure traits and plant functional types in modulating the correlation between canopy nitrogen and reflectance in a temperate forest in northeast China

    Science.gov (United States)

    Yu, Quanzhou; Wang, Shaoqiang; Zhou, Lei

    2017-10-01

    A precise estimate of canopy leaf nitrogen concentration (CNC, based on dry mass) is important for researching the carbon assimilation capability of forest ecosystems. Hyperspectral remote sensing technology has been applied to estimate regional CNC, which can adjust forest photosynthetic capacity and carbon uptake. However, the relationship between forest CNC and canopy spectral reflectance as well as its mechanism is still poorly understood. Using measured CNC, canopy structure and species composition data, four vegetation indices (VIs), and near-infrared reflectance (NIR) derived from EO-1 Hyperion imagery, we investigated the role of canopy structure traits and plant functional types (PFTs) in modulating the correlation between CNC and canopy reflectance in a temperate forest in northeast China. A plot-scale forest structure indicator, named broad foliar dominance index (BFDI), was introduced to provide forest canopy structure and coniferous and broadleaf species composition. Then, we revealed the response of forest canopy reflectance spectrum to BFDI and CNC. Our results showed that leaf area index had no significant effect on NIR (P>0.05) but indicated that there was a significant correlation (R2=0.76, P0.05). On the contrary, removing the CNC effect, the partial correlation between BFDI and NIR was positively significant (R=0.69, Pforest types. Nevertheless, the relationship cannot be considered as a feasible approach of CNC estimation for a single PFT.

  18. Employing lidar to detail vegetation canopy architecture for prediction of aeolian transport

    Science.gov (United States)

    Sankey, Joel B.; Law, Darin J.; Breshears, David D.; Munson, Seth M.; Webb, Robert H.

    2013-01-01

    The diverse and fundamental effects that aeolian processes have on the biosphere and geosphere are commonly generated by horizontal sediment transport at the land surface. However, predicting horizontal sediment transport depends on vegetation architecture, which is difficult to quantify in a rapid but accurate manner. We demonstrate an approach to measure vegetation canopy architecture at high resolution using lidar along a gradient of dryland sites ranging from 2% to 73% woody plant canopy cover. Lidar-derived canopy height, distance (gaps) between vegetation elements (e.g., trunks, limbs, leaves), and the distribution of gaps scaled by vegetation height were correlated with canopy cover and highlight potentially improved horizontal dust flux estimation than with cover alone. Employing lidar to estimate detailed vegetation canopy architecture offers promise for improved predictions of horizontal sediment transport across heterogeneous plant assemblages.

  19. Wireless sensor networks for canopy temperature sensing and irrigation management

    Science.gov (United States)

    For researchers, canopy temperature measurements have proven useful in characterizing crop water stress and developing protocols for irrigation management. Today, there is heightened interest in using remote canopy temperature measurements for real-time irrigation scheduling. However, without the us...

  20. Dispersion simulation of airborne effluent through tree canopy using OpenFOAM CFD code

    International Nuclear Information System (INIS)

    Rakesh, P.T.; Venkatesan, R.; Baskaran, R.; Venkatraman, B.

    2016-01-01

    Nuclear plants are often surrounded by tree canopy as a part of landscaping and green belt development. The transport and dispersion of air borne pollutants within the tree/plant canopies is greatly controlled by turbulence. The density of the tree canopy, the height and type of the trees is of importance while determining the intensity of turbulence. In order to study the mechanical effect of the canopy and the consequent modification in the ground level concentration pattern from a ground level release of radioactivity, a CFD code called OpenFOAM is used. The main task of this study is the implementation of flow and dispersion through plant canopies in Open FOAM

  1. ForestCrowns: a software tool for analyzing ground-based digital photographs of forest canopies

    Science.gov (United States)

    Matthew F. Winn; Sang-Mook Lee; Phillip A. Araman

    2013-01-01

    Canopy coverage is a key variable used to characterize forest structure. In addition, the light transmitted through the canopy is an important ecological indicator of plant and animal habitat and understory climate conditions. A common ground-based method used to document canopy coverage is to take digital photographs from below the canopy. To assist with analyzing...

  2. Influence of precipitation, landscape and hydrogeomorphic lake features on pelagic allochthonous indicators in two connected ultraoligotrophic lakes of North Patagonia

    Energy Technology Data Exchange (ETDEWEB)

    Queimalinos, Claudia, E-mail: queimalinosc@comahue-conicet.gob.ar [Laboratorio de Fotobiologia, Instituto de Investigaciones en Biodiversidad y Medio Ambiente (INIBIOMA, UNComahue-CONICET), Quintral 1250, R8400FRF Bariloche, Rio Negro (Argentina); Reissig, Mariana; Dieguez, Maria del Carmen [Laboratorio de Fotobiologia, Instituto de Investigaciones en Biodiversidad y Medio Ambiente (INIBIOMA, UNComahue-CONICET), Quintral 1250, R8400FRF Bariloche, Rio Negro (Argentina); Arcagni, Marina; Ribeiro Guevara, Sergio [Laboratorio de Analisis por Activacion Neutronica (LAAN), Centro Atomico Bariloche, Comision Nacional de Energia Atomica, Av. Bustillo 9500, R8402AGP Bariloche, Rio Negro (Argentina); Campbell, Linda [School of Environmental Studies, Saint Mary' s University, 923 Robie Street, Halifax, Nova Scotia, Canada B3H-3C3 (Canada); Soto Cardenas, Carolina [Laboratorio de Fotobiologia, Instituto de Investigaciones en Biodiversidad y Medio Ambiente (INIBIOMA, UNComahue-CONICET), Quintral 1250, R8400FRF Bariloche, Rio Negro (Argentina); Rapacioli, Raul [Facultad de Ingenieria, Universidad Nacional del Comahue, Buenos Aires1400, Q8300IBX Neuquen (Argentina); and others

    2012-06-15

    We investigated the terrestrial influence on two chained deep ultraoligotrophic lakes of North Patagonia (Argentina) through the seasonal analysis of two pelagic allochthonous indicators: i) water color, as a proxy of allochthonous dissolved organic matter in lakes; and ii) the color to chlorophyll a ratio (Color:Chla), as an indicator of the relationship between allochthonous and autochthonous carbon pools. We also evaluated the potential transfer pathways of the allochthonous dissolved organic matter into the pelagic food webs of these deep lakes, including the natural zooplankton {delta}{sup 13}C in the analysis. The dynamics of the allochthonous indicators were related to the precipitation regime, water level fluctuations, and hydrogeomorphic and catchment features of lakes Moreno East and Moreno West. The water color (absorbance at 440 nm) was extremely low (< 0.28 m{sup -1}) in both lakes regardless of the season. However, precipitation and snowmelt regimes drove the increase and decrease of water color, respectively. A significant positive relationship between the zooplankton bulk {delta}{sup 13}C with the water color would suggest an input of allochthonous organic carbon into the pelagic consumers. The incorporation of the dissolved allochthonous material into higher trophic levels is likely favored by the bacterivorous behavior of planktonic organisms, mixotrophic flagellates and ciliates, which dominate the pelagic food webs of these Patagonian lakes. Morphometric aspects, mainly the higher water residence time, led to lower values of allochthony in Moreno East compared to Moreno West, probably accentuated by its upper position in the lake chain. Overall, our results suggest that these allochthonous signals can bring insight into the magnitude of the interaction between terrestrial environments and lake ecosystems, even in extremely clear and ultraoligotrophic systems, such as the Andean Patagonian lakes. - Highlights: Black-Right-Pointing-Pointer Pelagic

  3. The niche and phylogeography of a passerine reveal the history of biological diversification between the Andean and the Atlantic forests.

    Science.gov (United States)

    Trujillo-Arias, Natalia; Dantas, Gisele P M; Arbeláez-Cortés, Enrique; Naoki, Kazuya; Gómez, Maria I; Santos, Fabricio R; Miyaki, Cristina Y; Aleixo, Alexandre; Tubaro, Pablo L; Cabanne, Gustavo S

    2017-07-01

    The Atlantic Forest is separated from the Andean tropical forest by dry and open vegetation biomes (Chaco and Cerrado). Despite this isolation, both rainforests share closely related lineages, which suggest a past connection. This connection could have been important for forest taxa evolution. In this study, we used the Saffron-billed Sparrow (Arremon flavirostris) as a model to evaluate whether the Andean and the Atlantic forests act as a refugia system, as well as to test for a history of biogeographic connection between them. In addition, we evaluated the molecular systematic of intraspecific lineages of the studied species. We modeled the current and past distribution of A. flavirostris, performed phylogeographic analyses based on mitochondrial and nuclear genes, and used Approximate Bayesian Computation (ABC) analyses to test for biogeographic scenarios. The major phylogeographic disjunction within A. flavirostris was found between the Andean and the Atlantic forests, with a divergence that occurred during the Mid-Pleistocene. Our paleodistribution models indicated a connection between these forest domains in different periods and through both the Chaco and Cerrado. Additionally, the phylogeographic and ABC analyses supported that the Cerrado was the main route of connection between these rainforests, but without giving decisive evidence against a Chaco connection. Our study with A. flavirostris suggest that the biodiversity of the Andean and of the Atlantic forests could have been impacted (and perhaps enriched?) by cycles of connections through the Cerrado and Chaco. This recurrent cycle of connection between the Andean and the Atlantic Forest could have been important for the evolution of Neotropical forest taxa. In addition, we discussed taxonomic implications of the results and proposed to split the studied taxon into two full species. Copyright © 2017 Elsevier Inc. All rights reserved.

  4. Preliminary phylogenetic analysis of the Andean clade and the placement of new Colombian blueberries (Ericaceae, Vaccinieae

    Directory of Open Access Journals (Sweden)

    Paola Pedraza-Penalosa

    2015-04-01

    Full Text Available The blueberry tribe Vaccinieae (Ericaceae is particularly diverse in South America and underwent extensive radiation in Colombia where many endemics occur. Recent fieldwork in Colombia has resulted in valuable additions to the phylogeny and as well in the discovery of morphologically noteworthy new species that need to be phylogenetically placed before being named. This is particularly important, as the monophyly of many of the studied genera have not been confirmed. In order to advance our understanding of the relationships within neotropical Vaccinieae and advice the taxonomy of the new blueberry relatives, here we present the most comprehensive phylogenetic analysis for the Andean clade. Anthopterus, Demosthenesia, and Pellegrinia are among the putative Andean genera recovered as monophyletic, while other eight Andean genera were not. The analyses also showed that genera that have been traditionally widely defined are non-monophyletic and could be further split into more discrete groups. Four newly discovered Colombian Vaccinieae are placed in the monophyletic Satyria s.s. and the Psammisia I clade. Although these new species are endemic to the Colombian Western Cordillera and Chocó biogeographic region and three are not known outside of Las Orquídeas National Park, they do not form sister pairs.

  5. Estimating Aboveground Biomass and Carbon Stocks in Periurban Andean Secondary Forests Using Very High Resolution Imagery

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    Nicola Clerici

    2016-07-01

    Full Text Available Periurban forests are key to offsetting anthropogenic carbon emissions, but they are under constant threat from urbanization. In particular, secondary Neotropical forest types in Andean periurban areas have a high potential to store carbon, but are currently poorly characterized. To address this lack of information, we developed a method to estimate periurban aboveground biomass (AGB—a proxy for multiple ecosystem services—of secondary Andean forests near Bogotá, Colombia, based on very high resolution (VHR GeoEye-1, Pleiades-1A imagery and field-measured plot data. Specifically, we tested a series of different pre-processing workflows to derive six vegetation indices that were regressed against in situ estimates of AGB. Overall, the coupling of linear models and the Ratio Vegetation Index produced the most satisfactory results. Atmospheric and topographic correction proved to be key in improving model fit, especially in high aerosol and rugged terrain such as the Andes. Methods and findings provide baseline AGB and carbon stock information for little studied periurban Andean secondary forests. The methodological approach can also be used for integrating limited forest monitoring plot AGB data with very high resolution imagery for cost-effective modelling of ecosystem service provision from forests, monitoring reforestation and forest cover change, and for carbon offset assessments.

  6. Active avoidance from a crude oil soluble fraction by an Andean paramo copepod.

    Science.gov (United States)

    Araújo, Cristiano V M; Moreira-Santos, Matilde; Sousa, José P; Ochoa-Herrera, Valeria; Encalada, Andrea C; Ribeiro, Rui

    2014-09-01

    Several oil spills due to ruptures in the pipeline oil systems have occurred at the Andean paramo. A sample of this crude oil was mixed with water from a nearby Andean lagoon and the toxicity of the soluble fraction was assessed through lethal and avoidance assays with a locally occurring copepod (Boeckella occidentalis intermedia). The integration of mortality and avoidance aimed at predicting the immediate decline of copepod populations facing an oil leakage. The 24-h median lethal PAH concentration was 42.7 (26.4-91.6) µg L(-1). In the 12-h avoidance assay, 30% avoidance was recorded at the highest PAH concentration (19.4 µg L(-1)). The mortality at this PAH concentration would be of 25% and, thus, the population immediate decline would be of 55%. The inclusion of non-forced exposure testing with the quantification of the avoidance response in environmental risk assessments is, therefore, supported due to underestimation of the lethal assays.

  7. Composition and diversity of High Andean in the Fauna Production Reserve Chimborazo, Ecuador

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    Jorge Caranqui

    2016-03-01

    Full Text Available The present study inquire the floristic diversity of 9 sampling in four plots of 1 m² of high andean in several locations in the “Reserva de Producción de Fauna Chimborazo”. For the development of this study, we used an adaptation of the method of plots “Gloria”. With coverage (% in each of the plots, Further the diversity indices and similarity with respective analysis were obtained. The data obtained reflect a diversity that can range from medium to low, believe that this is due to anthropogenic activities that have taken place in these ecosistems. With the presence mostly Calamagrostis intermedia, it could establish that the type of vegetation is herbaceous in high andean is higher percentage; is the species that is almost always present in most types of vegetation of the RPF Chimborazo and high dominance that influences the results of low floristic diversity indices was found in the analysis. As a result the most abundant family Asteraceae is well Poaceae.

  8. The Andean Paepalanthus pilosus complex (Eriocaulaceae): a revision with three new taxa

    Science.gov (United States)

    Hensold, Nancy

    2016-01-01

    Abstract A herbarium-based revision is provided for Paepalanthus pilosus and allies, five commonly confused species of cushion plants native to Andean paramo. These are placed in the recircumscribed Paepalanthus subsect. Cryptanthella Suess. The group includes Paepalanthus pilosus, Paepalanthus dendroides, and Paepalanthus lodiculoides. An additional two species and one variety are newly described: Paepalanthus caryonauta, Paepalanthus huancabambensis, and Paepalanthus pilosus var. leoniae. The latter two are Peruvian endemics, while Paepalanthus caryonauta is known from four countries, and has long been confused with other species. An additional, possibly undescribed taxon is noted from the Serrania de Perijá, Colombia. Five new synonyms and three lectotypes are proposed, and the common misapplication of some names is noted. Within the Paepalanthus pilosus complex, species differences were found in timing of peduncle elongation, sex ratio, and leaf, perianth, diaspore and nectary morphology. Ecological differences are suggested by specimen data and a review of ecological literature. Descriptions, photographs and maps are provided for all species, as is a key to the groups of eriocaulaceous cushion plants from Andean South America. PMID:27489483

  9. Preandean geological configuration of the eastern North Patagonian Massif, Argentina

    Directory of Open Access Journals (Sweden)

    Daniel A. Gregori

    2013-11-01

    Full Text Available The Preandean geological configuration of the eastern North Patagonian Massif is established through the use of geological and geophysical analysis. The positive gravity anomalies located near the Atlantic coast are due to 535 and 540 Ma old rocks belonging to the Pampean Orogeny (Precambrian–middle Cambrian, which are widely recognized in central and northern Argentina. The Famatinian Cycle (Ordovician–Devonian is represented by a Silurian–Devonian marine basin equivalent to those of eastern-central Argentina and South Africa, and which was deformed at the end of the Devonian by an ∼E–W to WNW–ESE compressional event, part of the Famatinian Orogeny. Containing strong gravity gradients, the NW–SE belt is coincident with fault zones which were originated during the Gondwanide Orogeny. This event also produced NW–SE overthrusting of the Silurian–Devonian sequences and strike-slip faults that displaced blocks in the same direction. This deformation event belongs to the Gondwanide Orogeny that includes movements related to a counterclockwise rotation of blocks in northern Patagonia. The strong negative anomalies located in the western part of the area stem from the presence of rocks of the Jurassic Cañadón Asfalto basin interbedded in the Marifil Complex. These volcaniclastic sequences show mild deformation of accommodation zones in a pre-Jurassic paleorelief.

  10. Model for absorption and release of gaseous materials by forest canopies

    International Nuclear Information System (INIS)

    Murphy, C.E. Jr.

    1976-01-01

    A model of the physical processes defining the absorption and release of materials by a forest canopy has been developed. The model deals with the turbulent transport of gaseous materials in the surface boundary layer near the canopy, the turbulent transport in the canopy atmosphere, the transport through the boundary layer near the leaf and soil surface, and the solution of the gaseous materials in intracellular fluids and subsequent diffusion into the leaf cells. The model is used to simulate the uptake of molecular tritium by the forest canopy and the subsequent release of tritiated water. Results of dynamic simulations of tritium uptake and release are compared with data collected at the time of a release of molecular tritium to the atmosphere

  11. TREE STEM AND CANOPY BIOMASS ESTIMATES FROM TERRESTRIAL LASER SCANNING DATA

    Directory of Open Access Journals (Sweden)

    K. Olofsson

    2017-10-01

    Full Text Available In this study an automatic method for estimating both the tree stem and the tree canopy biomass is presented. The point cloud tree extraction techniques operate on TLS data and models the biomass using the estimated stem and canopy volume as independent variables. The regression model fit error is of the order of less than 5 kg, which gives a relative model error of about 5 % for the stem estimate and 10–15 % for the spruce and pine canopy biomass estimates. The canopy biomass estimate was improved by separating the models by tree species which indicates that the method is allometry dependent and that the regression models need to be recomputed for different areas with different climate and different vegetation.

  12. Tree Death Not Resulting in Gap Creation: An Investigation of Canopy Dynamics of Northern Temperate Deciduous Forests

    Directory of Open Access Journals (Sweden)

    Jean-Francois Senécal

    2018-01-01

    Full Text Available Several decades of research have shown that canopy gaps drive tree renewal processes in the temperate deciduous forest biome. In the literature, canopy gaps are usually defined as canopy openings that are created by partial or total tree death of one or more canopy trees. In this study, we investigate linkages between tree damage mechanisms and the formation or not of new canopy gaps in northern temperate deciduous forests. We studied height loss processes in unmanaged and managed forests recovering from partial cutting with multi-temporal airborne Lidar data. The Lidar dataset was used to detect areas where canopy height reduction occurred, which were then field-studied to identify the tree damage mechanisms implicated. We also sampled the density of leaf material along transects to characterize canopy structure. We used the dataset of the canopy height reduction areas in a multi-model inference analysis to determine whether canopy structures or tree damage mechanisms most influenced the creation of new canopy gaps within canopy height reduction areas. According to our model, new canopy gaps are created mainly when canopy damage enlarges existing gaps or when height is reduced over areas without an already established dense sub-canopy tree layer.

  13. The relationship between reference canopy conductance and simplified hydraulic architecture

    Science.gov (United States)

    Novick, Kimberly; Oren, Ram; Stoy, Paul; Juang, Jehn-Yih; Siqueira, Mario; Katul, Gabriel

    2009-06-01

    Terrestrial ecosystems are dominated by vascular plants that form a mosaic of hydraulic conduits to water movement from the soil to the atmosphere. Together with canopy leaf area, canopy stomatal conductance regulates plant water use and thereby photosynthesis and growth. Although stomatal conductance is coordinated with plant hydraulic conductance, governing relationships across species has not yet been formulated at a practical level that can be employed in large-scale models. Here, combinations of published conductance measurements obtained with several methodologies across boreal to tropical climates were used to explore relationships between canopy conductance rates and hydraulic constraints. A parsimonious hydraulic model requiring sapwood-to-leaf area ratio and canopy height generated acceptable agreement with measurements across a range of biomes (r2=0.75). The results suggest that, at long time scales, the functional convergence among ecosystems in the relationship between water-use and hydraulic architecture eclipses inter-specific variation in physiology and anatomy of the transport system. Prognostic applicability of this model requires independent knowledge of sapwood-to-leaf area. In this study, we did not find a strong relationship between sapwood-to-leaf area and physical or climatic variables that are readily determinable at coarse scales, though the results suggest that climate may have a mediating influence on the relationship between sapwood-to-leaf area and height. Within temperate forests, canopy height alone explained a large amount of the variance in reference canopy conductance (r2=0.68) and this relationship may be more immediately applicable in the terrestrial ecosystem models.

  14. Permian depositional age of metaturbidites of the Duque de York Complex, southern Chile: U-Pb SHRIMP data and palynology

    International Nuclear Information System (INIS)

    Sepulveda, Fernando A; Palma-Heldt, Sylvia; Herve, Francisco; Fanning, Mark

    2010-01-01

    The Duque de York Complex (DYC) is part of the low grade metamorphic accretionary complexes of the pre-Andean Patagonian 'basement'. It is a sedimentary succession exposed along the western margin of southernmost South America. New U-Pb zircon ages and palynological data restrict the maximum depositional age of the DYC to the limit between the early Permian (Kungurian) and the middle Permian (Roadian). The palynological association recorded in the DYC, characterized mainly by Gymnospermopsida pollen, indicates a humid environment of forest with an under-growth of ferns. Regional paleogeographic correlations point out that an interpretation of DYC as an autochthonous terrane cannot be discarded, contrasting with previous hypotheses which suggest an allochthonous character for this complex

  15. Plant science in forest canopies--the first 30 years of advances and challenges (1980-2010).

    Science.gov (United States)

    Lowman, Margaret D; Schowalter, Timothy D

    2012-04-01

    As an emerging subdiscipline of forest biology, canopy science has undergone a transition from observational, 'oh-wow' exploration to a more hypothesis-driven, experimental arena for rigorous field biology. Although efforts to explore forest canopies have occurred for a century, the new tools to access the treetops during the past 30 yr facilitated not only widespread exploration but also new discoveries about the complexity and global effects of this so-called 'eighth continent of the planet'. The forest canopy is the engine that fixes solar energy in carbohydrates to power interactions among forest components that, in turn, affect regional and global climate, biogeochemical cycling and ecosystem services. Climate change, biodiversity conservation, fresh water conservation, ecosystem productivity, and carbon sequestration represent important components of forest research that benefit from access to the canopy for rigorous study. Although some canopy variables can be observed or measured from the ground, vertical and horizontal variation in environmental conditions and processes within the canopy that determine canopy-atmosphere and canopy-forest floor interactions are best measured within the canopy. Canopy science has matured into a cutting-edge subset of forest research, and the treetops also serve as social and economic drivers for sustainable communities, fostering science education and ecotourism. This interdisciplinary context of forest canopy science has inspired innovative new approaches to environmental stewardship, involving diverse stakeholders. © 2012 The Authors. New Phytologist © 2012 New Phytologist Trust.

  16. Abundance, feeding and reproduction of Salminus sp. (Pisces: Characidae from mountain streams of the Andean piedmont in Venezuela

    Directory of Open Access Journals (Sweden)

    Douglas Rodríguez-Olarte

    Full Text Available To obtain basic information for management, aspects of the ecology of Salminus sp. (Pisces: Characidae, were studied in piedmont rivers of the southwestern flank of the Andes in Venezuela. Collections were made with seines of various lengths and mesh sizes, and both underwater and terrestrial observations were recorded to estimate abundance and feeding events. Interviews with local fishermen and inhabitants were made to obtain data on use. The species is present along the entire length of the Andean piedmont in Venezuela, although in some rivers it is now scarce. Small individuals form mixed schools with Brycon whitei, but larger Salminus sp. usually only school with others of the same species. Average abundance was greater in larger rivers, and didn't vary appreciably with season for any of the rivers studied. Size and weight ranged from 15.1 to 40.5 cm SL and 47.7 to 1,210 g, respectively. Females had maximum ovary maturity at the beginning of the rainy season, with an average fecundity of 35,834 eggs, and spawning occurred during spates of high water. Feeding was crepuscular, with most events recorded during the first and last hours of sunlight. In smaller fish up to 20 cm SL, the diet was varied, but above that size fish were the principal food item. Salminus sp. has little commercial importance in this region but forms an important part of the local subsistence fishery, and occasionally it is targeted for sport fishing. The minimum legal size of capture for the species should be raised, since the current limit permits the capture of many sexually immature individuals.

  17. LEAF MICROMORPHOMETRY OF Schinus molle L. (ANARCADIACEAE IN DIFFERENT CANOPY HEIGHTS.

    Directory of Open Access Journals (Sweden)

    Marinês Ferreira Pires

    2015-03-01

    Full Text Available Leaf characterization of trees is essential for its identification and use, as well as to understand its relationships with environment. The objective of this work is to study the leaflet anatomy and leaf biometrical characteristics at different canopy heights of Schinus molle plants as a function of its environmental and physiological modifications. Leaves were collected at three different canopy heights: base, middle and upper canopy in a plantation of S. molle. Leaves were used for anatomical and biometrical analysis. For the anatomical analysis, leaves were fixed in FAA and stored in ethanol 70% and further submitted to transversal and paradermical sections. Slides were photomicrographed and image analysis was performed in UTHSCSA-Imagetool. For biometrical analysis leaf area, length, width, dry mass and specific leaf area were evaluated. The leaflets exhibited single layer epidermis, anomocytic and ciclocytic stomata, isobilateral mesophyll, subepidermal parenchyma layer in both adaxial and abaxial faces of epidermis, secretory vessels and lamellar collenchyma in midrib and leaf border. Leaf anatomy modifications occurred in cuticle and mesophyll thickness, vascular system, phloem thickness, and stomatal density in accordance with leaf canopy position. Leaves were smaller and with reduced leaf area at higher canopy positions. S. molle leaf anatomy is different from other species within Schinus genre with modifications under different environmental and physiological modifications promoted by its canopy height.

  18. Vegetation Indices for Mapping Canopy Foliar Nitrogen in a Mixed Temperate Forest

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    Zhihui Wang

    2016-06-01

    Full Text Available Hyperspectral remote sensing serves as an effective tool for estimating foliar nitrogen using a variety of techniques. Vegetation indices (VIs are a simple means of retrieving foliar nitrogen. Despite their popularity, few studies have been conducted to examine the utility of VIs for mapping canopy foliar nitrogen in a mixed forest context. In this study, we assessed the performance of 32 vegetation indices derived from HySpex airborne hyperspectral images for estimating canopy mass-based foliar nitrogen concentration (%N in the Bavarian Forest National Park. The partial least squares regression (PLSR was performed for comparison. These vegetation indices were classified into three categories that are mostly correlated to nitrogen, chlorophyll, and structural properties such as leaf area index (LAI. %N was destructively measured in 26 broadleaf, needle leaf, and mixed stand plots to represent the different species and canopy structure. The canopy foliar %N is defined as the plot-level mean foliar %N of all species weighted by species canopy foliar mass fraction. Our results showed that the variance of canopy foliar %N is mainly explained by functional type and species composition. The normalized difference nitrogen index (NDNI produced the most accurate estimation of %N (R2CV = 0.79, RMSECV = 0.26. A comparable estimation of %N was obtained by the chlorophyll index Boochs2 (R2CV = 0.76, RMSECV = 0.27. In addition, the mean NIR reflectance (800–850 nm, representing canopy structural properties, also achieved a good accuracy in %N estimation (R2CV = 0.73, RMSECV = 0.30. The PLSR model provided a less accurate estimation of %N (R2CV = 0.69, RMSECV = 0.32. We argue that the good performance of all three categories of vegetation indices in %N estimation can be attributed to the synergy among plant traits (i.e., canopy structure, leaf chemical and optical properties while these traits may converge across plant species for evolutionary reasons. Our

  19. Impact of Vertical Canopy Position on Leaf Spectral Properties and Traits across Multiple Species

    Directory of Open Access Journals (Sweden)

    Tawanda W. Gara

    2018-02-01

    Full Text Available Understanding the vertical pattern of leaf traits across plant canopies provide critical information on plant physiology, ecosystem functioning and structure and vegetation response to climate change. However, the impact of vertical canopy position on leaf spectral properties and subsequently leaf traits across the entire spectrum for multiple species is poorly understood. In this study, we examined the ability of leaf optical properties to track variability in leaf traits across the vertical canopy profile using Partial Least Square Discriminatory Analysis (PLS-DA. Leaf spectral measurements together with leaf traits (nitrogen, carbon, chlorophyll, equivalent water thickness and specific leaf area were studied at three vertical canopy positions along the plant stem: lower, middle and upper. We observed that foliar nitrogen (N, chlorophyll (Cab, carbon (C, and equivalent water thickness (EWT were higher in the upper canopy leaves compared with lower shaded leaves, while specific leaf area (SLA increased from upper to lower canopy leaves. We found that leaf spectral reflectance significantly (P ≤ 0.05 shifted to longer wavelengths in the ‘red edge’ spectrum (685–701 nm in the order of lower > middle > upper for the pooled dataset. We report that spectral bands that are influential in the discrimination of leaf samples into the three groups of canopy position, based on the PLS-DA variable importance projection (VIP score, match with wavelength regions of foliar traits observed to vary across the canopy vertical profile. This observation demonstrated that both leaf traits and leaf reflectance co-vary across the vertical canopy profile in multiple species. We conclude that canopy vertical position has a significant impact on leaf spectral properties of an individual plant’s traits, and this finding holds for multiple species. These findings have important implications on field sampling protocols, upscaling leaf traits to canopy level

  20. Crop canopy BRDF simulation and analysis using Monte Carlo method

    NARCIS (Netherlands)

    Huang, J.; Wu, B.; Tian, Y.; Zeng, Y.

    2006-01-01

    This author designs the random process between photons and crop canopy. A Monte Carlo model has been developed to simulate the Bi-directional Reflectance Distribution Function (BRDF) of crop canopy. Comparing Monte Carlo model to MCRM model, this paper analyzes the variations of different LAD and

  1. What is the most prominent factor limiting photosynthesis in different layers of a greenhouse cucumber canopy?

    Science.gov (United States)

    Chen, Tsu-Wei; Henke, Michael; de Visser, Pieter H B; Buck-Sorlin, Gerhard; Wiechers, Dirk; Kahlen, Katrin; Stützel, Hartmut

    2014-09-01

    Maximizing photosynthesis at the canopy level is important for enhancing crop yield, and this requires insights into the limiting factors of photosynthesis. Using greenhouse cucumber (Cucumis sativus) as an example, this study provides a novel approach to quantify different components of photosynthetic limitations at the leaf level and to upscale these limitations to different canopy layers and the whole plant. A static virtual three-dimensional canopy structure was constructed using digitized plant data in GroIMP. Light interception of the leaves was simulated by a ray-tracer and used to compute leaf photosynthesis. Different components of photosynthetic limitations, namely stomatal (S(L)), mesophyll (M(L)), biochemical (B(L)) and light (L(L)) limitations, were calculated by a quantitative limitation analysis of photosynthesis under different light regimes. In the virtual cucumber canopy, B(L) and L(L) were the most prominent factors limiting whole-plant photosynthesis. Diffusional limitations (S(L) + M(L)) contributed Photosynthesis in the lower canopy was more limited by the biochemical capacity, and the upper canopy was more sensitive to light than other canopy parts. Although leaves in the upper canopy received more light, their photosynthesis was more light restricted than in the leaves of the lower canopy, especially when the light condition above the canopy was poor. An increase in whole-plant photosynthesis under diffuse light did not result from an improvement of light use efficiency but from an increase in light interception. Diffuse light increased the photosynthesis of leaves that were directly shaded by other leaves in the canopy by up to 55%. Based on the results, maintaining biochemical capacity of the middle-lower canopy and increasing the leaf area of the upper canopy would be promising strategies to improve canopy photosynthesis in a high-wire cucumber cropping system. Further analyses using the approach described in this study can be expected to

  2. Landscape genetics, historical isolation and cross-Andean gene flow in the wax palm, Ceroxylon echinulatum (Arecaceae)

    DEFF Research Database (Denmark)

    Trénel, P.; Hansen, Michael Møller; Nordmand, S.

    2008-01-01

    -Huancabamba zone (AHZ) of southern Ecuador/northern Peru, as indicated by observations on fruit morphology. Second, we assessed the timeframe of cross-Andean divergence, and third, we investigated the impact of contemporary and historical landscape features on observed spatio-genetic patterns. Individual-based...... Bayesian clustering (BC) identified a northeastern, southeastern, southwestern, and northwestern cluster, with areas of genetic discontinuity coinciding with the Andes and the Giron-Paute deflection. F-statistics derived from BC suggested an east-to-west dispersal history. Population-based analyses...... impact of climatic friction. Coalescent analysis revealed that cross-Andean divergence took place during the Quaternary. Significant historical isolation (RST > FST) was found in the southwestern population. The current study illustrates a joint effect of founder dynamics, divergence by distance...

  3. Seasonal changes in camera-based indices from an open canopy black spruce forest in Alaska, and comparison with indices from a closed canopy evergreen coniferous forest in Japan

    Science.gov (United States)

    Nagai, Shin; Nakai, Taro; Saitoh, Taku M.; Busey, Robert C.; Kobayashi, Hideki; Suzuki, Rikie; Muraoka, Hiroyuki; Kim, Yongwon

    2013-06-01

    Evaluation of the carbon, water, and energy balances in evergreen coniferous forests requires accurate in situ and satellite data regarding their spatio-temporal dynamics. Daily digital camera images can be used to determine the relationships among phenology, gross primary productivity (GPP), and meteorological parameters, and to ground-truth satellite observations. In this study, we examine the relationship between seasonal variations in camera-based canopy surface indices and eddy-covariance-based GPP derived from field studies in an Alaskan open canopy black spruce forest and in a Japanese closed canopy cedar forest. The ratio of the green digital number to the total digital number, hue, and GPP showed a bell-shaped seasonal profile at both sites. Canopy surface images for the black spruce forest and cedar forest mainly detected seasonal changes in vegetation on the floor of the forest and in the tree canopy, respectively. In contrast, the seasonal cycles of the ratios of the red and blue digital numbers to the total digital numbers differed between the two sites, possibly due to differences in forest structure and leaf color. These results suggest that forest structural characteristics, such as canopy openness and seasonal forest-floor changes, should be considered during continuous observations of phenology in evergreen coniferous forests.

  4. Restoration of a forested wetland ecosystem in a thermally impacted stream corridor

    International Nuclear Information System (INIS)

    Nelson, E.A.; McKee, W.H. Jr.; Dulohery, C.J.

    1995-01-01

    The Savannah River Swamp is a 3,020 Ha forested wetland on the floodplain of the Savannah River and is located on the Department of Energy's Savannah River Site (SRS). Major impacts to the swamp hydrology occurred with the completion of the production reactors and one coal-fired powerhouse at the SRS in the early 1950's. Water was pumped from the Savannah River, through secondary heat exchangers of the reactors, and discharged into three of the tributary streams that flow into the swamp. This continued from 1954 to 1988 at various levels. The sustained increases in water volume resulted in overflow of the original stream banks and the creation of additional floodplains. Accompanying this was considerable erosion of the original stream corridor and deposition of a deep silt layer on the newly formed delta. Heated water was discharged directly into Pen Branch and water temperature in the stream often exceeded 50 C. The nearly continuous flood of the swamp, the thermal load of the water, and the heavy silting resulted in complete mortality of the original vegetation in large areas of the floodplain. Research has been ongoing to determine methods to reintroduce tree species characteristic of more mature forested wetlands. The goal of the restoration is to create structural and biological diversity in the forest canopy by establishing a mix of species typically present in riparian and wetland forests of the area

  5. Can Andean medicine coexist with biomedical healthcare? A comparison of two rural communities in Peru and Bolivia.

    Science.gov (United States)

    Mathez-Stiefel, Sarah-Lan; Vandebroek, Ina; Rist, Stephan

    2012-07-24

    It is commonly assumed that indigenous medical systems remain strong in developing countries because biomedicine is physically inaccessible or financially not affordable. This paper compares the health-seeking behavior of households from rural Andean communities at a Peruvian and a Bolivian study site. The main research question was whether the increased presence of biomedicine led to a displacement of Andean indigenous medical practices or to coexistence of the two healing traditions. Open-ended interviews and free listing exercises were conducted between June 2006 and December 2008 with 18 households at each study site. Qualitative identification of households' therapeutic strategies and use of remedies was carried out by means of content analysis of interview transcriptions and inductive interference. Furthermore, a quantitative assessment of the incidence of culture-bound illnesses in local ethnobiological inventories was performed. Our findings indicate that the health-seeking behavior of the Andean households in this study is independent of the degree of availability of biomedical facilities in terms of quality of services provided, physical accessibility, and financial affordability, except for specific practices such as childbirth. Preference for natural remedies over pharmaceuticals coexists with biomedical healthcare that is both accessible and affordable. Furthermore, our results show that greater access to biomedicine does not lead to less prevalence of Andean indigenous medical knowledge, as represented by the levels of knowledge about culture-bound illnesses. The take-home lesson for health policy-makers from this study is that the main obstacle to use of biomedicine in resource-poor rural areas might not be infrastructural or economic alone. Rather, it may lie in lack of sufficient recognition by biomedical practitioners of the value and importance of indigenous medical systems. We propose that the implementation of health care in indigenous

  6. Contrasting germination responses to vegetative canopies experienced in pre- vs. post-dispersal environments

    Science.gov (United States)

    Leverett, Lindsay D.; Auge, Gabriela A.; Bali, Aman; Donohue, Kathleen

    2016-01-01

    Background Seeds adjust their germination based on conditions experienced before and after dispersal. Post-dispersal cues are expected to be more accurate predictors of offspring environments, and thus offspring success, than pre-dispersal cues. Therefore, germination responses to conditions experienced during seed maturation may be expected to be superseded by responses to conditions experienced during seed imbibition. In taxa of disturbed habitats, neighbours frequently reduce the performance of germinants. This leads to the hypotheses that a vegetative canopy will reduce germination in such taxa, and that a vegetative canopy experienced during seed imbibition will over-ride germination responses to a canopy experienced during seed maturation, since it is a more proximal cue of immediate competition. These hypotheses were tested here in Arabidopsis thaliana. Methods Seeds were matured under a simulated canopy (green filter) or white light. Fresh (dormant) seeds were imbibed in the dark, white light or canopy at two temperatures (10 or 22 °C), and germination proportions were recorded. Germination was also recorded in after-ripened (less dormant) seeds that were induced into secondary dormancy and imbibed in the dark at each temperature, either with or without brief exposure to red and far-red light. Key Results Unexpectedly, a maturation canopy expanded the conditions that elicited germination, even as seeds lost and regained dormancy. In contrast, an imbibition canopy impeded or had no effect on germination. Maturation under a canopy did not modify germination responses to red and far-red light. Seed maturation under a canopy masked genetic variation in germination. Conclusions The results challenge the hypothesis that offspring will respond more strongly to their own environment than to that of their parents. The observed relaxation of germination requirements caused by a maturation canopy could be maladaptive for offspring by disrupting germination responses

  7. The Muralla Pircada: an ancient Andean debris flow retention dam, Santa Rita B archaeological site, Chao Valley, Northern Peru

    Science.gov (United States)

    Brooks, William E.; Willett, Jason C.; Kent, Jonathan D.; Vasquez, Victor; Rosales, Teresa

    2005-01-01

    Debris flows caused by El Niño events, earthquakes, and glacial releases have affected northern Perú for centuries. The Muralla Pircada, a northeast-trending, 2.5 km long stone wall east of the Santa Rita B archaeological site (Moche-Chimú) in the Chao Valley, is field evidence that ancient Andeans recognized and, more importantly, attempted to mitigate the effects of debris flows. The Muralla is upstream from the site and is perpendicular to local drainages. It is 1–2 m high, up to 5 m wide, and is comprised of intentionally-placed, well-sorted, well-rounded, 20–30 cm cobbles and boulders from nearby streams. Long axes of the stones are gently inclined and parallel local drainage. Case-and-fill construction was used with smaller cobbles and pebbles used as fill. Pre-Muralla debris flows are indicated by meter-sized, angular boulders that were incorporated in-place into construction of the dam and are now exposed in breeches in the dam. Post-Muralla debris flows in the Chao Valley are indicated by meter-sized, angular boulders that now abut the retention dam.

  8. Quantifying Ancient Maya Land Use Legacy Effects on Contemporary Rainforest Canopy Structure

    Directory of Open Access Journals (Sweden)

    Jessica N. Hightower

    2014-11-01

    Full Text Available Human land use legacies have significant and long-lasting ecological impacts across landscapes. Investigating ancient (>400 years legacy effects can be problematic due to the difficulty in detecting specific, historic land uses, especially those hidden beneath dense canopies. Caracol, the largest (~200 km2 Maya archaeological site in Belize, was abandoned ca. A.D. 900, leaving behind myriad structures, causeways, and an extensive network of agricultural terraces that persist beneath the architecturally complex tropical forest canopy. Airborne LiDAR enables the detection of these below-canopy archaeological features while simultaneously providing a detailed record of the aboveground 3-dimensional canopy organization, which is indicative of a forest’s ecological function. Here, this remote sensing technology is used to determine the effects of ancient land use legacies on contemporary forest structure. Canopy morphology was assessed by extracting LiDAR point clouds (0.25 ha plots from LiDAR-identified terraced (n = 150 and non-terraced (n = 150 areas on low (0°–10°, medium (10°–20°, and high (>20° slopes. We calculated the average canopy height, canopy openness, and vertical diversity from the LiDAR returns, with topographic features (i.e., slope, elevation, and aspect as covariates. Using a PerMANOVA procedure, we determined that forests growing on agricultural terraces exhibited significantly different canopy structure from those growing on non-terraced land. Terraces appear to mediate the effect of slope, resulting in less structural variation between slope and non-sloped land and yielding taller, more closed, more vertically diverse forests. These human land uses abandoned >1000 years ago continue to impact contemporary tropical rainforests having implications related to arboreal habitat and carbon storage.

  9. Modeling radiative transfer in tropical rainforest canopies: sensitivity of simulated albedo to canopy architectural and optical parameters

    Directory of Open Access Journals (Sweden)

    Sílvia N. M. Yanagi

    2011-12-01

    Full Text Available This study evaluates the sensitivity of the surface albedo simulated by the Integrated Biosphere Simulator (IBIS to a set of Amazonian tropical rainforest canopy architectural and optical parameters. The parameters tested in this study are the orientation and reflectance of the leaves of upper and lower canopies in the visible (VIS and near-infrared (NIR spectral bands. The results are evaluated against albedo measurements taken above the K34 site at the INPA (Instituto Nacional de Pesquisas da Amazônia Cuieiras Biological Reserve. The sensitivity analysis indicates a strong response to the upper canopy leaves orientation (x up and to the reflectivity in the near-infrared spectral band (rNIR,up, a smaller sensitivity to the reflectivity in the visible spectral band (rVIS,up and no sensitivity at all to the lower canopy parameters, which is consistent with the canopy structure. The combination of parameters that minimized the Root Mean Square Error and mean relative error are Xup = 0.86, rVIS,up = 0.062 and rNIR,up = 0.275. The parameterizations performed resulted in successful simulations of tropical rainforest albedo by IBIS, indicating its potential to simulate the canopy radiative transfer for narrow spectral bands and permitting close comparison with remote sensing products.Este estudo avalia a sensibilidade do albedo da superfície pelo Simulador Integrado da Biosfera (IBIS a um conjunto de parâmetros que representam algumas propriedades arquitetônicas e óticas do dossel da floresta tropical Amazônica. Os parâmetros testados neste estudo são a orientação e refletância das folhas do dossel superior e inferior nas bandas espectrais do visível (VIS e infravermelho próximo (NIR. Os resultados são avaliados contra observações feitas no sítio K34 pertencente ao Instituto Nacional de Pesquisas da Amazônia (INPA na Reserva Biológica de Cuieiras. A análise de sensibilidade indica uma forte resposta aos parâmetros de orienta

  10. Canopy uptake of atmospheric N deposition at a conifer forest: part I -canopy N budget, photosynthetic efficiency and net ecosystem exchange

    International Nuclear Information System (INIS)

    Sievering, H.; Tomaszewski, T.; Torizzo, J.

    2007-01-01

    Global carbon cycle assessments of anthropogenic nitrogen (N) deposition influences on carbon sequestration often assume enhanced sequestration results. This assumption was evaluated at a Rocky Mountains spruce-fir forest. Forest canopy N uptake (CNU) of atmospheric N deposition was estimated by combining event wet and throughfall N fluxes with gradient measured HNO 3 and NH 3 as well as inferred (NO x and particulate N) dry fluxes. Approximately 80% of the growing-season 3 kg N/ha total deposition is retained in canopy foliage and branches. This CNU constitutes ∼1/3 of canopy growing season new N supply at this conifer forest site. Daytime net ecosystem exchange (NEE) significantly (P = 0.006) and negatively (CO 2 uptake) correlated with CNU. Multiple regression indicates ∼20% of daytime NEE may be attributed to CNU (P < 0.02); more than soil water content. A wet deposition N-amendment study (Tomaszewski and Sievering), at canopy spruce branches, increased their growing-season CNU by 40-50% above ambient. Fluorometry and gas exchange results show N-amended spruce branches had greater photosynthetic efficiency and higher carboxylation rates than control and untreated branches. N-amended branches had 25% less photoinhibition, with a 5-9% greater proportion of foliar-N-in-Rubisco. The combined results provide, partly, a mechanistic explanation for the NEE dependence on CNU

  11. Water stress effects on spatially referenced cotton crop canopy properties

    Science.gov (United States)

    rop canopy temperature is known to be affected by water stress. Canopy reflectance can also be impacted as leaf orientation and color respond to the stress. As sensor systems are investigated for real-time management of irrigation and nitrogen, it is essential to understand how the data from the sen...

  12. Effect of canopy architectural variation on transpiration and thermoregulation

    Science.gov (United States)

    Linn, R.; Banerjee, T.

    2017-12-01

    One of the major scientific questions identified by the NGEE - Tropics campaign is the effect of disturbances such as forest fires, vegetation thinning and land use change on carbon, water and energy fluxes. Answers to such questions can help develop effective forest management strategies and shape policies to mitigate damages under natural and anthropogenic climate change. The absence of horizontal and vertical variation of forest canopy structure in current models is a major source of uncertainty in answering these questions. The current work addresses this issue through a bottom up process based modeling approach to systematically investigate the effect of forest canopy architectural variation on plant physiological response as well as canopy level fluxes. A plant biophysics formulation is used which is based on the following principles: (1) a model for the biochemical demand for CO2 as prescribed by photosynthesis models. This model can differentiate between photosynthesis under light-limited and nutrient-limited scenarios. (2) A Fickian mass transfer model including transfer through the laminar boundary layer on leaves that may be subjected to forced or free convection depending upon the mean velocity and the radiation load; (3) an optimal leaf water use strategy that maximizes net carbon gain for a given transpiration rate to describe the stomatal aperture variation; (4) a leaf-level energy balance to accommodate evaporative cooling. Such leaf level processes are coupled to solutions of atmospheric flow through vegetation canopies. In the first test case, different scenarios of top heavy and bottom heavy (vertical) foliage distributions are investigated within a one-dimensional framework where no horizontal heterogeneity of canopy structure is considered. In another test case, different spatial distributions (both horizontal and vertical) of canopy geometry (land use) are considered, where flow solutions using large eddy simulations (LES) are coupled to the

  13. Egg masses of the Patagonian squid Doryteuthis (Amerigo gahi attached to giant kelp (Macrocystis pyrifera in the sub-Antarctic ecoregion

    Directory of Open Access Journals (Sweden)

    Sebastián Rosenfeld

    2014-11-01

    Full Text Available Egg masses of the Patagonian squid Doryteuthis (Amerigo gahi attached to giant kelp (Macrocystis pyrifera in the Magellanic channels of the sub-Antarctic ecoregion in southern South America is documented for the first time. Of seven egg masses observed between 2008 and 2011, one was taken to the laboratory to be analysed and photographed. Comprising long transparent capsules containing eggs, the masses were strongly attached to the stipes of M. pyrifera. This macroalgae is a potentially important economic resource due to its multiple industrial uses; this study shows that it also serves an important ecological role as a spawning substrate for D. gahi.

  14. El Niño drought increased canopy turnover in Amazon forests.

    Science.gov (United States)

    Leitold, Veronika; Morton, Douglas C; Longo, Marcos; Dos-Santos, Maiza Nara; Keller, Michael; Scaranello, Marcos

    2018-03-25

    Amazon droughts, including the 2015-2016 El Niño, may reduce forest net primary productivity and increase canopy tree mortality, thereby altering both the short- and the long-term net forest carbon balance. Given the broad extent of drought impacts, inventory plots or eddy flux towers may not capture regional variability in forest response to drought. We used multi-temporal airborne Lidar data and field measurements of coarse woody debris to estimate patterns of canopy turnover and associated carbon losses in intact and fragmented forests in the central Brazilian Amazon between 2013-2014 and 2014-2016. Average annualized canopy turnover rates increased by 65% during the drought period in both intact and fragmented forests. The average size and height of turnover events was similar for both time intervals, in contrast to expectations that the 2015-2016 El Niño drought would disproportionally affect large trees. Lidar-biomass relationships between canopy turnover and field measurements of coarse woody debris were modest (R 2  ≈ 0.3), given similar coarse woody debris production and Lidar-derived changes in canopy volume from single tree and multiple branch fall events. Our findings suggest that El Niño conditions accelerated canopy turnover in central Amazon forests, increasing coarse woody debris production by 62% to 1.22 Mg C ha -1  yr -1 in drought years . No claim to original US Government works New Phytologist © 2018 New Phytologist Trust.

  15. Canopy seed banks as time capsules of biodiversity in pasture-remnant tree crowns.

    Science.gov (United States)

    Nadkarni, Nalini M; Haber, Willam A

    2009-10-01

    Tropical pastures present multiple barriers to tree regeneration and restoration. Relict trees serve as "regeneration foci" because they ameliorate the soil microclimate and serve as safe spots for dispersers. Here, we describe another mechanism by which remnant trees may facilitate pasture regeneration: the presence of seed banks in the canopy soil that accumulates from decomposing epiphytes within the crowns of mature remnant trees in tropical cloud forest pastures. We compared seed banks of canopy soils (histosols derived from fallen leaves, fruits, flower, and twigs of host trees and epiphytes, dead bryophytes, bark, detritus, dead animals, and microorganisms, and dust that accumulate on trunks and the upper surfaces of large branches) in pastures, canopy soils in primary forest trees, and soil on the forest floor in Monteverde, Costa Rica. There were 5211 epiphytic and terrestrial plant seeds in the three habitats. All habitats were dominated by seeds in a relatively small number of plant families, most of which were primarily woody, animal pollinated, and animal dispersed. The density of seeds on the forest floor was greater than seed density in either pasture-canopy or forest-canopy soils; the latter two did not differ. Eight species in 44 families and 61 genera from all of the habitats were tallied. There were 37 species in the pasture-canopy soil, 33 in the forest-canopy soil, and 57 on the forest floor. Eleven species were common to all habitats. The mean species richness in the pasture canopy was significantly higher than the forest canopy (F =83.38; p banks of pasture trees can function as time capsules by providing propagules that are removed in both space and time from the primary forest. Their presence may enhance the ability of pastures to regenerate more quickly, reinforcing the importance of trees in agricultural settings.

  16. Effects of sub-Arctic shrub canopies on snowmelt energetics

    Science.gov (United States)

    Bewley, D.; Essery, R.; Pomeroy, J.

    2006-12-01

    Much of the low Arctic is covered with shrub tundra, and there is increasing evidence that snowmelt rates are substantially different between shrub tundra and poorly vegetated sites. The cause of this remains uncertain, however, and extends beyond simple differences in albedo. Results are presented in this study from a detailed field investigation at Wolf Creek Research Basin in 2004 to determine the effect of two different shrub canopy structures on both melt rates and the partitioning of melt energy. The low shrub site (LSS) was essentially an unvegetated snowfield prior to melt (mean albedo ~0.85), and shrubs only became exposed during the last few days of melt reaching a mean height of 0.31 m and mean Plant Area Index (PAI) of 0.32. Shrubs at the tall shrub site (TSS) were partially buried initially (shrub fraction, mean height and PAI of 0.2, 0.9 m and 0.41) but dominated the landscape by the end of melt (corresponding values of 0.71, 1.6 m and 0.6). Melt rates were higher at TSS up until the exposure of shrubs and bare ground at LSS, after which the rates converged. A Shrub-Snow Canopy Model (SSCM) is developed to improve snowmelt simulations for shrub canopies by parameterizing the key shrub effects on surface fluxes, including the extinction of shortwave irradiance beneath shrubs and in canopy gaps, and the enhancement of snow surface fluxes of longwave radiation and sensible heat. SSCM was run for LSS assuming no shrubs were present above the variable snow and bare ground tiles, whereas for TSS an increasing shrub fraction above each tile was prescribed from observations. Results from both sites suggest that sensible heat fluxes contributed more melt energy than net radiation, and were greater during early melt at TSS due to the warming of exposed shrubs. SWE was accurately predicted against transect measurements at TSS (rms error 4 mm), but was overestimated at LSS (rms error 13 mm) since both air temperatures and turbulent transport were underestimated

  17. The TF1 Radio Astronomy Working Group in the Andean ROAD: goals and challenges for 2025

    Science.gov (United States)

    Chaparro Molano, G.

    2017-07-01

    Since the creation of the Andean Regional Office of Astronomy for Development (OAD) of the International Astronomical Union, one of the main goals has been to foster a scientific culture of radio astronomy in countries of the central and northern Andes (Bolivia, Colombia, Ecuador, Perú, and Venezuela). For this reason, Andean ROAD Task Force 1 (Research and Education in Universities) created the Radio Astronomy Working Group to set a path along which collaborative endeavors can grow and yield scientific results. The first official meeting of the Working Group took place in Bogotá, Colombia during the 2nd Astronomá en los Andes Workshop (2015) where scientists actively developing projects in radio astronomy set goals for the near future, such as improving mobility for researchers and students, developing collaborations in related areas such as engineering and data science, and building transnational collaborations aiming at developing VLBI across the countries of the Andean ROAD and beyond. In this poster, I present current projects and associated research groups (ROAS - Perú, SiAMo - Colombia, Alfa-Orion UTP - Colombia, RAIG - Chile) and discuss goalposts and current challenges in the development of transnational radioastronomical projects. As a case study, I present the development and early astronomical results of the privately funded UECCI 4m Radio Telescope for 21 cm line observations in Bogotá, Colombia.

  18. Natural canopy bridges effectively mitigate tropical forest fragmentation for arboreal mammals.

    Science.gov (United States)

    Gregory, Tremaine; Carrasco-Rueda, Farah; Alonso, Alfonso; Kolowski, Joseph; Deichmann, Jessica L

    2017-06-20

    Linear infrastructure development and resulting habitat fragmentation are expanding in Neotropical forests, and arboreal mammals may be disproportionately impacted by these linear habitat clearings. Maintaining canopy connectivity through preservation of connecting branches (i.e. natural canopy bridges) may help mitigate that impact. Using camera traps, we evaluated crossing rates of a pipeline right-of-way in a control area with no bridges and in a test area where 13 bridges were left by the pipeline construction company. Monitoring all canopy crossing points for a year (7,102 canopy camera nights), we confirmed bridge use by 25 mammal species from 12 families. With bridge use beginning immediately after exposure and increasing over time, use rates were over two orders of magnitude higher than on the ground. We also found a positive relationship between a bridge's use rate and the number of species that used it, suggesting well-used bridges benefit multiple species. Data suggest bridge use may be related to a combination of bridge branch connectivity, multiple connections, connectivity to adjacent forest, and foliage cover. Given the high use rate and minimal cost, we recommend all linear infrastructure projects in forests with arboreal mammal populations include canopy bridges.

  19. Comparison of infrared canopy temperature in a rubber plantation and tropical rain forest

    Science.gov (United States)

    Song, Qing-Hai; Deng, Yun; Zhang, Yi-Ping; Deng, Xiao-Bao; Lin, You-Xing; Zhou, Li-Guo; Fei, Xue-Hai; Sha, Li-Qing; Liu, Yun-Tong; Zhou, Wen-Jun; Gao, Jin-Bo

    2017-10-01

    Canopy temperature is a result of the canopy energy balance and is driven by climate conditions, plant architecture, and plant-controlled transpiration. Here, we evaluated canopy temperature in a rubber plantation (RP) and tropical rainforest (TR) in Xishuangbanna, southwestern China. An infrared temperature sensor was installed at each site to measure canopy temperature. In the dry season, the maximum differences (Tc - Ta) between canopy temperature (Tc) and air temperature (Ta) in the RP and TR were 2.6 and 0.1 K, respectively. In the rainy season, the maximum (Tc - Ta) values in the RP and TR were 1.0 and -1.1 K, respectively. There were consistent differences between the two forests, with the RP having higher (Tc - Ta) than the TR throughout the entire year. Infrared measurements of Tc can be used to calculate canopy stomatal conductance in both forests. The difference in (Tc - Ta) at three gc levels with increasing direct radiation in the RP was larger than in the TR, indicating that change in (Tc - Ta) in the RP was relatively sensitive to the degree of stomatal closure.

  20. THE PRE-PENUMBRAL MAGNETIC CANOPY IN THE SOLAR ATMOSPHERE

    Energy Technology Data Exchange (ETDEWEB)

    MacTaggart, David [School of Mathematics and Statistics University of Glasgow, Glasgow G12 8QW (United Kingdom); Guglielmino, Salvo L.; Zuccarello, Francesca [Dipartimento di Fisica e Astronomia—Sezione Astrofisica, Università di Catania, via S. Sofia 78, I-95123 Catania (Italy)

    2016-11-01

    Penumbrae are the manifestation of magnetoconvection in highly inclined (to the vertical direction) magnetic field. The penumbra of a sunspot tends to form, initially, along the arc of the umbra antipodal to the main region of flux emergence. The question of how highly inclined magnetic field can concentrate along the antipodal curves of umbrae, at least initially, remains to be answered. Previous observational studies have suggested the existence of some form of overlying magnetic canopy that acts as the progenitor for penumbrae. We propose that such overlying magnetic canopies are a consequence of how the magnetic field emerges into the atmosphere and are, therefore, part of the emerging region. We show, through simulations of twisted flux tube emergence, that canopies of highly inclined magnetic field form preferentially at the required locations above the photosphere.

  1. Transmittance of young Norway spruce stand canopy for photosynthetically active radiation during the growing season

    International Nuclear Information System (INIS)

    Markova, I.; Kubasek, J.

    2013-01-01

    Analysis of transmittance of young Norway spruce stand canopy for photosynthetically active radiation (PAR) was made at the study site of Bily Kriz (the Moravian-Silesian Beskids Mts., the Czech Republic) at different sky conditions during the growing season in 2010. For the description of PAR transmittance different phenological phases of the spruce stand development in clear and overcast days were chosen. The mean daily PAR transmittance of the spruce canopy was significantly higher in overcast days compared with clear ones. Diffuse PAR thus penetrated into lower parts of the canopy more efficiently than direct one. PAR transmittance of young Norway spruce stand canopy was different in individual phenological phases of the spruce stand canopy which was caused by changes in the stand structure during the growing season. Thus monitoring of transmittance of young Norway spruce stand canopy for PAR can help to describe the development of spruce stand canopy

  2. Estimating the relative water content of leaves in a cotton canopy

    Science.gov (United States)

    Vanderbilt, Vern; Daughtry, Craig; Kupinski, Meredith; Bradley, Christine; French, Andrew; Bronson, Kevin; Chipman, Russell; Dahlgren, Robert

    2017-08-01

    Remotely sensing plant canopy water status remains a long term goal of remote sensing research. Established approaches to estimating canopy water status — the Crop Water Stress Index, the Water Deficit Index and the Equivalent Water Thickness — involve measurements in the thermal or reflective infrared. Here we report plant water status estimates based upon analysis of polarized visible imagery of a cotton canopy measured by ground Multi-Spectral Polarization Imager (MSPI). Such estimators potentially provide access to the plant hydrological photochemistry that manifests scattering and absorption effects in the visible spectral region.

  3. Soil Organic Carbon Variability in High-Andean Ecosystems: Bringing Together Machine Learning and Proximal Soil Sensing

    Science.gov (United States)

    Gavilan, C.; Grunwald, S.; Quiroz, R.

    2017-12-01

    The Andes represent the largest and highest mountain range in the tropics and is considered an important reserve of biodiversity, water provision and soil organic carbon (SOC) stocks. Nevertheless, limited attention has been given to estimate these stocks due to the lack of recent soil data, the poor accessibility and the wide range of coexistent ecosystems. In addition, conventional methods to determine SOC are usually time consuming and expensive to use in large-scale studies, hindering the possibility to have an accurate SOC assessment in the region. Proximal soil sensing techniques, such as visible near infrared (VNIR) and mid infrared (MIR) spectroscopy, have proven to be useful as an alternative to conventional methods for characterizing SOC but have not been tested in Andean soils. The aim of this study was to evaluate the potential of using VNIR and MIR spectroscopy to predict SOC content in the Central Andean region, using multivariate methods. Three study areas were selected across the Peruvian Central Andes. A total of 400 topsoil samples (0-30 cm) were collected and analyzed for SOC. The VNIR and MIR reflectance of the soil samples was measured in the laboratory. Three modeling approaches: Partial least squares regression (PLSR), random forest (RF) and support vector machine (SVM) were used to predict SOC from VNIR and MIR spectra in the study areas. The data was preprocessed in order to minimize the noise and optimize the accuracy of predictions. The models, for each study area, were assessed using 10-fold cross validation. Independent validation was implemented in the whole dataset (400 observations) by splitting it into calibration (70 %) and validation (30%) sets. Overall, the results indicate potential for both VNIR and MIR spectra to predict SOC content in the Andean soils. SOC content predictions from MIR spectra outperformed those from VNIR spectra. The evaluation of model performance shows that RF and SVM provide more accurate SOC predictions

  4. Waveform- and Terrestrial Lidar Assessment of the Usual (Structural) Suspects in a Forest Canopy

    Science.gov (United States)

    van Aardt, J. A.; Romanczyk, P.; Kelbe, D.; van Leeuwen, M.; Cawse-Nicholson, K.; Gough, C. M.; Kampe, T. U.

    2015-12-01

    Forest inventory has evolved from standard stem diameter-height relationships, to coarse canopy metrics, to more involved ecologically-meaningful variables, such as leaf area index (LAI) and even canopy radiative transfer as a function of canopy gaps, leaf clumping, and leaf angle distributions. Accurate and precise measurement of the latter set of variables presents a challenge to the ecological and modeling communities; however, relatively novel remote sensing modalities, e.g., waveform lidar (wlidar) and terrestrial lidar systems (TLS), have the potential to adress this challenge. Research teams at Rochester Institute of Technology (RIT) and the Virginia Commonwealth University (VCU) have been collaborating with the National Ecological Observation Network (NEON) to assess vegetation canopy structure and variation at the University of Michigan Biological Research Station and the NEON Northeast domain (Harvard Forest, MA). Airborne small-footprint wlidar data, in-situ TLS data, and first-principles, physics-based simulation tools are being used to study (i) the impact of vegetation canopy geometric elements on wlidar signals (twigs and petioles have been deemed negligible), (ii) the analysis of airborne wlidar data for top-down assessment of canopy metrics such as LAI, and (iii) our ability to extract "bottom-up" canopy structure from TLS using scans registered to each other using a novel marker-free registration approach (e.g., basal area: R2=0.82, RMSE=7.43 m2/ha). Such studies indicate that we can potentially assess radiative transfer through vegetation canopies remotely using a vertically-stratified approach with wlidar, and augment such an approach via rapid-scan TLS technology to gain a better understanding of fine-scale variation in canopy structure. This in turn is key to quantifying and modeling radiative transfer based on understanding of forest canopy structural change as a function of ecosystem development, climate, and anthropogenic drivers.

  5. Evaporation from rain-wetted forest in relation to canopy wetness, canopy cover, and net radiation

    NARCIS (Netherlands)

    Klaassen, W.

    2001-01-01

    Evaporation from wet canopies is commonly calculated using E-PM, the Penman-Monteith equation with zero surface resistance. However, several observations show a lower evaporation from rain-wetted forest. Possible causes for the difference between E-PM and experiments are evaluated to provide rules

  6. Regional water resources management in the Andean region with numerical models and satellite remote sensing

    NARCIS (Netherlands)

    Menenti, M.; Mulders, C.W.B.

    1999-01-01

    This report describes the development and adaptation of distributed numerical simulation models of hydrological processes in complex watersheds typical of the Andean region. These distributed models take advantage of the synoptic capabilities of sensors on-board satellites and GIS procedures have

  7. Coca: The History and Medical Significance of an Ancient Andean Tradition

    Directory of Open Access Journals (Sweden)

    Amy Sue Biondich

    2016-01-01

    Full Text Available Coca leaf products are an integral part of the lives of the Andean peoples from both a cultural and traditional medicine perspective. Coca is also the whole plant from which cocaine is derived. Coca products are thought to be a panacea for health troubles in regions of South America. This review will examine the toxicology of whole coca and will also look at medicinal applications of this plant, past, present, and future.

  8. Recognizing rural territorial heritage: characterization of Andean tuber production systems in Boyacá

    Directory of Open Access Journals (Sweden)

    Clavijo Ponce Neidy Lorena

    2011-08-01

    Full Text Available

    In the municipalities Ventaquemada and Turmequé (Boyacá- Colombia, we identified 20 small agricultures by their production systems including the following Andean tubers: Ullucus tuberosus Caldas (ulluco, Oxalis tuberosa Molina (oca, and Tropaeolum tuberosum R. & P. (Mashua, which were important in their family meals and culture, however, their use has declined and the area has not seen research and development processes that provide alternatives for handling, conservation, use and marketing, and now are at the risk of disappearing. This research conducted participatory assessment processes for the characterization of production systems and initiated reassessment processes of territorial heritage, identifying common sub-farm agrobiodiversity and projects for these traditional Andean tuber crops in order to enhance the special and knowhow knowledge surrounding the production.

  9. Estimation of in-canopy ammonia sources and sinks in a fertilized Zea mays field

    Science.gov (United States)

    An analytical model was developed that describes the in-canopy vertical distribution of NH3 source and sinks and vertical fluxes in a fertilized agricultural setting using measured in-canopy concentration and wind speed profiles. This model was applied to quantify in-canopy air-s...

  10. Biodiversity Meets the Atmosphere: A Global View of Forest Canopies

    Science.gov (United States)

    C. M. P. Ozanne; D. Anhuf; S. L. Boulter; M. Keller; R. L. Kitching; C. Korner; F. C. Meinzer; A. W. Mitchell; T. Nakashizuka; P. L. Silva Dias; N. E. Stork; S. J. Wright; M Yoshimura

    2003-01-01

    The forest canopy is the functional interface between 90% of Earth’s terrestrial biomass and the atmosphere. Multidisciplinary research in the canopy has expanded concepts of global species richness, physiological processes, and the provision of ecosystem services. Trees respond in a species-specific manner to elevated carbon dioxide levels, while climate change...

  11. Effects of microhabitat and land use on stream salamander abundance in the southwest Virginia coalfields

    Science.gov (United States)

    Sweeten, Sara E.; Ford, W. Mark

    2015-01-01

    Large-scale land uses such as residential wastewater discharge and coal mining practices, particularly surface coal extraction and associated valley fills, are of particular ecological concern in central Appalachia. Identification and quantification of both alterations across scales are a necessary first-step to mitigate negative consequences to biota. In central Appalachian headwater streams absent of fish, salamanders are the dominant, most abundant vertebrate predator providing a significant intermediate trophic role. Stream salamander species are considered to be sensitive to aquatic stressors and environmental alterations, and past research has shown linkages among microhabitat parameters, large-scale land use such as urbanization and logging with salamander abundances. However, little is known about these linkages in the coalfields of central Appalachia. In the summer of 2013, we visited 70 sites (sampled three times each) in the southwest Virginia coalfields to survey salamanders and quantify stream and riparian microhabitat parameters. Using an information-theoretic framework we compared the effects of microhabitat and large-scale land use on salamander abundances. Our findings indicate that dusky salamander (Desmognathus spp.) abundances are more correlated to microhabitat parameters such as canopy cover than to subwatershed land uses. Brook salamander (Eurycea spp.) abundances show strong negative associations to the suspended sediments and stream substrate embeddedness. Neither Desmognathus spp. nor Eurycea spp. abundances were influenced by water conductivity. These suggest protection or restoration of riparian habitats and erosion control is an important conservation component for maintaining stream salamanders in the mined landscapes of central Appalachia.

  12. Monitoring Forest Dynamics in the Andean Amazon: The Applicability of Breakpoint Detection Methods Using Landsat Time-Series and Genetic Algorithms

    Directory of Open Access Journals (Sweden)

    Fabián Santos

    2017-01-01

    Full Text Available The Andean Amazon is an endangered biodiversity hot spot but its forest dynamics are less studied than those of the Amazon lowland and forests from middle or high latitudes. This is because its landscape variability, complex topography and cloudy conditions constitute a challenging environment for any remote-sensing assessment. Breakpoint detection with Landsat time-series data is an established robust approach for monitoring forest dynamics around the globe but has not been properly evaluated for implementation in the Andean Amazon. We analyzed breakpoint detection-generated forest dynamics in order to determine its limitations when applied to three different study areas located along an altitude gradient in the Andean Amazon in Ecuador. Using all available Landsat imagery for the period 1997–2016, we evaluated different pre-processing approaches, noise reduction techniques, and breakpoint detection algorithms. These procedures were integrated into a complex function called the processing chain generator. Calibration was not straightforward since it required us to define values for 24 parameters. To solve this problem, we implemented a novel approach using genetic algorithms. We calibrated the processing chain generator by applying a stratified training sampling and a reference dataset based on high resolution imagery. After the best calibration solution was found and the processing chain generator executed, we assessed accuracy and found that data gaps, inaccurate co-registration, radiometric variability in sensor calibration, unmasked cloud, and shadows can drastically affect the results, compromising the application of breakpoint detection in mountainous areas of the Andean Amazon. Moreover, since breakpoint detection analysis of landscape variability in the Andean Amazon requires a unique calibration of algorithms, the time required to optimize analysis could complicate its proper implementation and undermine its application for large

  13. A LIDAR-Based Tree Canopy Characterization under Simulated Uneven Road Condition: Advance in Tree Orchard Canopy Profile Measurement

    Directory of Open Access Journals (Sweden)

    Yue Shen

    2017-01-01

    Full Text Available In real outdoor canopy profile detection, the accuracy of a LIDAR scanner to measure canopy structure is affected by a potentially uneven road condition. The level of error associated with attitude angles from undulations in the ground surface can be reduced by developing appropriate correction algorithm. This paper proposes an offline attitude angle offset correction algorithm based on a 3D affine coordinate transformation. The validity of the correction algorithm is verified by conducting an indoor experiment. The experiment was conducted on an especially designed canopy profile measurement platform. During the experiment, an artificial tree and a tree-shaped carved board were continuously scanned at constant laser scanner travel speed and detection distances under simulated bumpy road conditions. Acquired LIDAR laser scanner raw data was processed offline by exceptionally developed MATLAB program. The obtained results before and after correction method show that the single attitude angle offset correction method is able to correct the distorted data points in tree-shaped carved board profile measurement, with a relative error of 5%, while the compound attitude angle offset correction method is effective to reduce the error associated with compound attitude angle deviation from the ideal scanner pose, with relative error of 7%.

  14. A comparison of ground-based methods for estimating canopy closure for use in phenology research

    OpenAIRE

    Smith, AM; Ramsay, PM

    2018-01-01

    Abstract Climate change is influencing tree phenology, causing earlier and more prolonged canopy closure in temperate forests. Canopy closure is closely associated with understorey light, so shifts in its timing have wide-reaching consequences for ecological processes in the understorey. Widespread monitoring of forest canopies through time is needed to understand changes in light availability during spring in particular. Canopy openness, derived from hemispherical photography, has frequently...

  15. Successional position of dry Andean dwarf forest species as a basis for restoration trials

    NARCIS (Netherlands)

    Groenendijk, J.P.; Duivenvoorden, J.F.; Cleef, A.M.; Rietman, N.

    2005-01-01

    The successional affinity of nine woody species was inferred from the structure, diversity and disturbance history of the vegetation where these occurred. This was done in order to obtain a basis for a restoration experiment, currently in execution, in the dry Andean dwarf forest zone on the edge of

  16. Development of models for thermal infrared radiation above and within plant canopies

    Science.gov (United States)

    Paw u, Kyaw T.

    1992-01-01

    Any significant angular dependence of the emitted longwave radiation could result in errors in remotely estimated energy budgets or evapotranspiration. Empirical data and thermal infrared radiation models are reviewed in reference to anisotropic emissions from the plant canopy. The biometeorological aspects of linking longwave models with plant canopy energy budgets and micrometeorology are discussed. A new soil plant atmosphere model applied to anisotropic longwave emissions from a canopy is presented. Time variation of thermal infrared emission measurements is discussed.

  17. The dynamics of aerosol behaviour and fate within spruce canopies

    International Nuclear Information System (INIS)

    Ould-Dada, Zitouni

    1996-01-01

    The current work was intended to provide data on aerosol inputs to forest ecosystems and their subsequent fate. The background to the project was the Chernobyl accident which highlighted the importance of forests and other semi-natural ecosystems as a link in the transfer of radioactivity to man. In the aftermath of the Chernobyl accident, forests were identified as a specific type of semi-natural ecosystem for which radioecological data were almost completely absent within the countries of the European Union. Information on radionuclide behaviour and transfer in forest ecosystems was therefore needed to establish and test radiological assessment models which can be used to evaluate the likely contribution to radiological dose-to-man contaminated forests may make. The objective of this study was thus to provide data on dry deposition, resuspension and field loss of aerosols to forest canopies, in particular those of Norway spruce (Picea abies), from wind tunnel experiments conducted with small scale 'model' canopies. An aerosol generation system was developed to produce aerosol particles in the size range of 0.13-1.37 μm (VMD). Particle size distributions can be controlled within desired limits and with sufficient stability over time allowing the technique to be suitable for use in extended aerosol deposition studies. A full scale dry deposition experiment using 0.82 μm (VMAD) uranium particles was performed in the wind tunnel using Norway spruce saplings of approximately 45 cm height. Deposition velocities (V g ) were obtained and these were related to meteorological measurements (wind speed, friction velocity, turbulence intensity) inside the wind tunnel and LAI of the canopy. The latter was divided into five horizontal layers and both horizontal and vertical variations in deposition were assessed. A V g value of 0.497 cm s -1 was obtained for the canopy as a whole with the highest and lowest fluxes of 2.85 x 10 -8 and 8.14 x 10 -9 μgU cm -2 s -1 occurring at

  18. The rigid Andean sliver hypothesis challenged : impact on interseismic coupling on the Chilean subduction zone

    Science.gov (United States)

    Metois, M.

    2017-12-01

    Convergence partitioning between subduction zones and crustal active structures has been widely evidenced. For instance, the convergence between the Indian and Sunda plates is accommodated both by the Sumatra subduction zone and the Great Sumatran strike-slip fault, that defines a narrow sliver. In Cascadia, small-scale rotating rigid blocks bounded by active faults have been proposed (e.g. McCaffrey et al. 2007). Recent advances in geodetic measurements along the South-American margin especially in Ecuador, Peru and Chile and the need for precise determination of the coupling amount on the megathrust interface in particular for seismic hazard assessment, led several authors to propose the existence of large-scale Andean slivers rotating clockwise and counter-clockwise South and North of the Arica bend, respectively (e.g. Chlieh et al. 2011, Nocquet et al. 2014, Métois et al. 2013). In Chile, one single large Andean sliver bounded to the west by the subduction thrust and to the east by the subandean fold-an-thrust belt active front is used to mimic the velocities observed in the middle to far field that are misfitted by elastic coupling models on the megathrust interface alone (Métois et al. 2016). This rigid sliver is supposed to rotate clockwise around a Euler pole located in the South Atlantic ocean, consistently with long-term observed rotations detected by paleomagnetism (e.g. Arriagada et al. 2008). However, recent GPS data acquired in the Taltal area ( 26°S, Klein et al. submitted) show higher than expected middle-field eastward velocities and question the first-order assumption of a rigid Andean sliver. Mis-modeling the fore-arc deformation has a direct impact on the inverted coupling amount and distribution, and could therefore bias significantly the megathrust rupture scenarios. Correctly estimating the current-day deformation of the Andes is therefore required to properly assess for coupling on the plate interface and is challenging since crustal

  19. Turbulent mixing and removal of ozone within an Amazon rainforest canopy

    Science.gov (United States)

    Freire, L. S.; Gerken, T.; Ruiz-Plancarte, J.; Wei, D.; Fuentes, J. D.; Katul, G. G.; Dias, N. L.; Acevedo, O. C.; Chamecki, M.

    2017-03-01

    Simultaneous profiles of turbulence statistics and mean ozone mixing ratio are used to establish a relation between eddy diffusivity and ozone mixing within the Amazon forest. A one-dimensional diffusion model is proposed and used to infer mixing time scales from the eddy diffusivity profiles. Data and model results indicate that during daytime conditions, the upper (lower) half of the canopy is well (partially) mixed most of the time and that most of the vertical extent of the forest can be mixed in less than an hour. During nighttime, most of the canopy is predominantly poorly mixed, except for periods with bursts of intermittent turbulence. Even though turbulence is faster than chemistry during daytime, both processes have comparable time scales in the lower canopy layers during nighttime conditions. Nonchemical loss time scales (associated with stomatal uptake and dry deposition) for the entire forest are comparable to turbulent mixing time scale in the lower canopy during the day and in the entire canopy during the night, indicating a tight coupling between turbulent transport and dry deposition and stomatal uptake processes. Because of the significant time of day and height variability of the turbulent mixing time scale inside the canopy, it is important to take it into account when studying chemical and biophysical processes happening in the forest environment. The method proposed here to estimate turbulent mixing time scales is a reliable alternative to currently used models, especially for situations in which the vertical distribution of the time scale is relevant.

  20. Parameterization and sensitivity analyses of a radiative transfer model for remote sensing plant canopies

    Science.gov (United States)

    Hall, Carlton Raden

    A major objective of remote sensing is determination of biochemical and biophysical characteristics of plant canopies utilizing high spectral resolution sensors. Canopy reflectance signatures are dependent on absorption and scattering processes of the leaf, canopy properties, and the ground beneath the canopy. This research investigates, through field and laboratory data collection, and computer model parameterization and simulations, the relationships between leaf optical properties, canopy biophysical features, and the nadir viewed above-canopy reflectance signature. Emphasis is placed on parameterization and application of an existing irradiance radiative transfer model developed for aquatic systems. Data and model analyses provide knowledge on the relative importance of leaves and canopy biophysical features in estimating the diffuse absorption a(lambda,m-1), diffuse backscatter b(lambda,m-1), beam attenuation alpha(lambda,m-1), and beam to diffuse conversion c(lambda,m-1 ) coefficients of the two-flow irradiance model. Data sets include field and laboratory measurements from three plant species, live oak (Quercus virginiana), Brazilian pepper (Schinus terebinthifolius) and grapefruit (Citrus paradisi) sampled on Cape Canaveral Air Force Station and Kennedy Space Center Florida in March and April of 1997. Features measured were depth h (m), projected foliage coverage PFC, leaf area index LAI, and zenith leaf angle. Optical measurements, collected with a Spectron SE 590 high sensitivity narrow bandwidth spectrograph, included above canopy reflectance, internal canopy transmittance and reflectance and bottom reflectance. Leaf samples were returned to laboratory where optical and physical and chemical measurements of leaf thickness, leaf area, leaf moisture and pigment content were made. A new term, the leaf volume correction index LVCI was developed and demonstrated in support of model coefficient parameterization. The LVCI is based on angle adjusted leaf

  1. Effect of vegetative canopy architecture on vertical transport of massless particles

    Science.gov (United States)

    A series of large-eddy simulations were performed to examine the effect of canopy architecture on particle dispersion. A heterogeneous canopy geometry was simulated that consists of a set of infinitely repeating vegetation rows. Simulations in which row structure was approximately resolved were comp...

  2. Incorporating Canopy Cover for Airborne-Derived Assessments of Forest Biomass in the Tropical Forests of Cambodia.

    Science.gov (United States)

    Singh, Minerva; Evans, Damian; Coomes, David A; Friess, Daniel A; Suy Tan, Boun; Samean Nin, Chan

    2016-01-01

    This research examines the role of canopy cover in influencing above ground biomass (AGB) dynamics of an open canopied forest and evaluates the efficacy of individual-based and plot-scale height metrics in predicting AGB variation in the tropical forests of Angkor Thom, Cambodia. The AGB was modeled by including canopy cover from aerial imagery alongside with the two different canopy vertical height metrics derived from LiDAR; the plot average of maximum tree height (Max_CH) of individual trees, and the top of the canopy height (TCH). Two different statistical approaches, log-log ordinary least squares (OLS) and support vector regression (SVR), were used to model AGB variation in the study area. Ten different AGB models were developed using different combinations of airborne predictor variables. It was discovered that the inclusion of canopy cover estimates considerably improved the performance of AGB models for our study area. The most robust model was log-log OLS model comprising of canopy cover only (r = 0.87; RMSE = 42.8 Mg/ha). Other models that approximated field AGB closely included both Max_CH and canopy cover (r = 0.86, RMSE = 44.2 Mg/ha for SVR; and, r = 0.84, RMSE = 47.7 Mg/ha for log-log OLS). Hence, canopy cover should be included when modeling the AGB of open-canopied tropical forests.

  3. Coupling Fine-Scale Root and Canopy Structure Using Ground-Based Remote Sensing

    Directory of Open Access Journals (Sweden)

    Brady S. Hardiman

    2017-02-01

    Full Text Available Ecosystem physical structure, defined by the quantity and spatial distribution of biomass, influences a range of ecosystem functions. Remote sensing tools permit the non-destructive characterization of canopy and root features, potentially providing opportunities to link above- and belowground structure at fine spatial resolution in functionally meaningful ways. To test this possibility, we employed ground-based portable canopy LiDAR (PCL and ground penetrating radar (GPR along co-located transects in forested sites spanning multiple stages of ecosystem development and, consequently, of structural complexity. We examined canopy and root structural data for coherence (i.e., correlation in the frequency of spatial variation at multiple spatial scales ≤10 m within each site using wavelet analysis. Forest sites varied substantially in vertical canopy and root structure, with leaf area index and root mass more becoming even vertically as forests aged. In all sites, above- and belowground structure, characterized as mean maximum canopy height and root mass, exhibited significant coherence at a scale of 3.5–4 m, and results suggest that the scale of coherence may increase with stand age. Our findings demonstrate that canopy and root structure are linked at characteristic spatial scales, which provides the basis to optimize scales of observation. Our study highlights the potential, and limitations, for fusing LiDAR and radar technologies to quantitatively couple above- and belowground ecosystem structure.

  4. Canopy interaction with precipitation and sulphur deposition in two boreal forests of Quebec, Canada

    International Nuclear Information System (INIS)

    Marty, C.; Houle, D.; Duchesne, L.; Gagnon, C.

    2012-01-01

    The interaction of atmospheric sulphur (S) was investigated within the canopies of two boreal forests in Québec, Canada. The net canopy exchange approach, i.e. the difference between S–SO 4 in throughfall and precipitation, suggests high proportion of dry deposition in winter (up to 53%) as compared to summer (1–9%). However, a 3.5‰ decrease in δ 18 O–SO 4 throughfall in summer compared to incident precipitation points towards a much larger proportion of dry deposition during the warm season. We suggest that a significant fraction of dry deposition (about 1.2 kg ha −1 yr −1 , representing 30–40% of annual wet S deposition) which contributed to the decreased δ 18 O–SO 4 in throughfall was taken up by the canopy. Overall, these results showed that, contrary to what is commonly considered, S interchanges in the canopy could be important in boreal forests with low absolute atmospheric S depositions. - Highlights: ► We investigated sulphur interactions with the canopy of two boreal forests, Québec. ► Sulphur interchanges within the canopy were large and vary with seasons. ► About 1.2 kg S–SO 4 ha −1 yr −1 was taken up by the canopy during warm seasons. ► This represents 30–40% of annual wet S–SO 4 deposition. ► Canopy uptake must be considered for sulphur budget estimations in boreal forests. - The equivalent of 30–40% of annual wet S–SO 4 deposition was taken up by the canopy of two boreal forests during warm seasons.

  5. Spatial Heterogeneity of the Forest Canopy Scales with the Heterogeneity of an Understory Shrub Based on Fractal Analysis

    Directory of Open Access Journals (Sweden)

    Catherine K. Denny

    2017-04-01

    Full Text Available Spatial heterogeneity of vegetation is an important landscape characteristic, but is difficult to assess due to scale-dependence. Here we examine how spatial patterns in the forest canopy affect those of understory plants, using the shrub Canada buffaloberry (Shepherdia canadensis (L. Nutt. as a focal species. Evergreen and deciduous forest canopy and buffaloberry shrub presence were measured with line-intercept sampling along ten 2-km transects in the Rocky Mountain foothills of west-central Alberta, Canada. Relationships between overstory canopy and understory buffaloberry presence were assessed for scales ranging from 2 m to 502 m. Fractal dimensions of both canopy and buffaloberry were estimated and then related using box-counting methods to evaluate spatial heterogeneity based on patch distribution and abundance. Effects of canopy presence on buffaloberry were scale-dependent, with shrub presence negatively related to evergreen canopy cover and positively related to deciduous cover. The effect of evergreen canopy was significant at a local scale between 2 m and 42 m, while that of deciduous canopy was significant at a meso-scale between 150 m and 358 m. Fractal analysis indicated that buffaloberry heterogeneity positively scaled with evergreen canopy heterogeneity, but was unrelated to that of deciduous canopy. This study demonstrates that evergreen canopy cover is a determinant of buffaloberry heterogeneity, highlighting the importance of spatial scale and canopy composition in understanding canopy-understory relationships.

  6. Bayesian inferences suggest that Amazon Yunga Natives diverged from Andeans less than 5000 ybp: implications for South American prehistory.

    Science.gov (United States)

    Scliar, Marilia O; Gouveia, Mateus H; Benazzo, Andrea; Ghirotto, Silvia; Fagundes, Nelson J R; Leal, Thiago P; Magalhães, Wagner C S; Pereira, Latife; Rodrigues, Maira R; Soares-Souza, Giordano B; Cabrera, Lilia; Berg, Douglas E; Gilman, Robert H; Bertorelle, Giorgio; Tarazona-Santos, Eduardo

    2014-09-30

    Archaeology reports millenary cultural contacts between Peruvian Coast-Andes and the Amazon Yunga, a rainforest transitional region between Andes and Lower Amazonia. To clarify the relationships between cultural and biological evolution of these populations, in particular between Amazon Yungas and Andeans, we used DNA-sequence data, a model-based Bayesian approach and several statistical validations to infer a set of demographic parameters. We found that the genetic diversity of the Shimaa (an Amazon Yunga population) is a subset of that of Quechuas from Central-Andes. Using the Isolation-with-Migration population genetics model, we inferred that the Shimaa ancestors were a small subgroup that split less than 5300 years ago (after the development of complex societies) from an ancestral Andean population. After the split, the most plausible scenario compatible with our results is that the ancestors of Shimaas moved toward the Peruvian Amazon Yunga and incorporated the culture and language of some of their neighbors, but not a substantial amount of their genes. We validated our results using Approximate Bayesian Computations, posterior predictive tests and the analysis of pseudo-observed datasets. We presented a case study in which model-based Bayesian approaches, combined with necessary statistical validations, shed light into the prehistoric demographic relationship between Andeans and a population from the Amazon Yunga. Our results offer a testable model for the peopling of this large transitional environmental region between the Andes and the Lower Amazonia. However, studies on larger samples and involving more populations of these regions are necessary to confirm if the predominant Andean biological origin of the Shimaas is the rule, and not the exception.

  7. Do Small Canopy Gaps Created by Japanese Black Bears Facilitate Fruiting of Fleshy-Fruited Plants?

    Directory of Open Access Journals (Sweden)

    Kazuaki Takahashi

    Full Text Available Japanese black bears often break branches when climbing trees and feeding on fruit in canopies, thereby creating small canopy gaps. However, the role of black bear-created canopy gaps has not been evaluated in the context of multiple forest dynamics. Our hypothesis was that small canopy gaps created by black bears improve light conditions, which facilitates fruiting of adult fleshy-fruited plants located beneath the gaps, and also that this chain interaction depends on interactions among the size of gaps, improved light conditions, forest layers, and life form of plants. The rPPFD, size of black bear-created canopy gaps, and fruiting/non-fruiting of fleshy-fruited plants were investigated in five forest layers beneath black-bear-created canopy gaps and closed canopies of Mongolian oak (Quercus crispula. We found that light conditions improved beneath black bear-disturbed trees with canopy gaps of large size, and the effect of improvement of light conditions was reduced with descending forest layers. Fruiting of fleshy-fruited plants, especially woody lianas and trees, was facilitated by the improvement of light conditions accompanied by an increase in the size of black-bear-created gaps. Data from this study revealed that canopy disturbance by black bears was key for improving light conditions and accelerating fruiting of fleshy-fruited trees and woody lianas in the canopy layers in particular. Therefore, our hypothesis was mostly supported. Our results provide evidence that Japanese black bears have high potential as ecosystem engineers that increase the availability of resources (light and fruit in this study to other species by causing physical state changes in biotic materials (branches of Q. crispula in this study.

  8. Do Small Canopy Gaps Created by Japanese Black Bears Facilitate Fruiting of Fleshy-Fruited Plants?

    Science.gov (United States)

    Takahashi, Kazuaki; Takahashi, Kaori; Washitani, Izumi

    2015-01-01

    Japanese black bears often break branches when climbing trees and feeding on fruit in canopies, thereby creating small canopy gaps. However, the role of black bear-created canopy gaps has not been evaluated in the context of multiple forest dynamics. Our hypothesis was that small canopy gaps created by black bears improve light conditions, which facilitates fruiting of adult fleshy-fruited plants located beneath the gaps, and also that this chain interaction depends on interactions among the size of gaps, improved light conditions, forest layers, and life form of plants. The rPPFD, size of black bear-created canopy gaps, and fruiting/non-fruiting of fleshy-fruited plants were investigated in five forest layers beneath black-bear-created canopy gaps and closed canopies of Mongolian oak (Quercus crispula). We found that light conditions improved beneath black bear-disturbed trees with canopy gaps of large size, and the effect of improvement of light conditions was reduced with descending forest layers. Fruiting of fleshy-fruited plants, especially woody lianas and trees, was facilitated by the improvement of light conditions accompanied by an increase in the size of black-bear-created gaps. Data from this study revealed that canopy disturbance by black bears was key for improving light conditions and accelerating fruiting of fleshy-fruited trees and woody lianas in the canopy layers in particular. Therefore, our hypothesis was mostly supported. Our results provide evidence that Japanese black bears have high potential as ecosystem engineers that increase the availability of resources (light and fruit in this study) to other species by causing physical state changes in biotic materials (branches of Q. crispula in this study).

  9. Seasonal Canopy Temperatures for Normal and Okra Leaf Cotton under Variable Irrigation in the Field

    Directory of Open Access Journals (Sweden)

    James R. Mahan

    2016-11-01

    Full Text Available Temperature affects a number of physiological factors in plants and is related to water use, yield and quality in many crop species. Seasonal canopy temperature, measured with infrared thermometers, is often used in conjunction with environmental factors (e.g., air temperature, humidity, solar radiation to assess crop stress and management actions in cotton. Normal and okra leaf shapes in cotton have been associated with differences in water use and canopy temperature. The okra leaf shape in cotton is generally expected to result in lower water use and lower canopy temperatures, relative to normal leaf, under water deficits. In this study canopy temperatures were monitored in okra and normal leaf varieties for a growing season at four irrigation levels. Differences in canopy temperature (<2 °C were measured between the two leaf shapes. As irrigation levels increased, canopy temperature differences between the leaf shapes declined. At the lowest irrigation level, when differences in sensible energy exchanges due to the okra leaf shape would be enhanced, the canopy temperature of the okra leaf was warmer than the normal leaf. This suggests that varietal differences that are not related to leaf shape may have more than compensated for leaf shape differences in the canopy temperature.

  10. Effect of Vertical Canopy Architecture on Transpiration, Thermoregulation and Carbon Assimilation

    Directory of Open Access Journals (Sweden)

    Tirtha Banerjee

    2018-04-01

    Full Text Available Quantifying the impact of natural and anthropogenic disturbances such as deforestation, forest fires and vegetation thinning among others on net ecosystem—atmosphere exchanges of carbon dioxide, water vapor and heat—is an important aspect in the context of modeling global carbon, water and energy cycles. The absence of canopy architectural variation in horizontal and vertical directions is a major source of uncertainty in current climate models attempting to address these issues. This manuscript demonstrates the importance of considering the vertical distribution of foliage density by coupling a leaf level plant biophysics model with analytical solutions of wind flow and light attenuation in a horizontally homogeneous canopy. It is demonstrated that plant physiological response in terms of carbon assimilation, transpiration and canopy surface temperature can be widely different for two canopies with the same leaf area index (LAI but different leaf area density distributions, under several conditions of wind speed, light availability, soil moisture availability and atmospheric evaporative demand.

  11. Surface wave energy absorption by a partially submerged bio-inspired canopy.

    Science.gov (United States)

    Nové-Josserand, C; Castro Hebrero, F; Petit, L-M; Megill, W M; Godoy-Diana, R; Thiria, B

    2018-03-27

    Aquatic plants are known to protect coastlines and riverbeds from erosion by damping waves and fluid flow. These flexible structures absorb the fluid-borne energy of an incoming fluid by deforming mechanically. In this paper we focus on the mechanisms involved in these fluid-elasticity interactions, as an efficient energy harvesting system, using an experimental canopy model in a wave tank. We study an array of partially-submerged flexible structures that are subjected to the action of a surface wave field, investigating in particular the role of spacing between the elements of the array on the ability of our system to absorb energy from the flow. The energy absorption potential of the canopy model is examined using global wave height measurements for the wave field and local measurements of the elastic energy based on the kinematics of each element of the canopy. We study different canopy arrays and show in particular that flexibility improves wave damping by around 40%, for which half is potentially harvestable.

  12. [Canopy conductance characteristics of poplar in agroforestry system in west Liaoning Province of Northeast China].

    Science.gov (United States)

    Li, Zheng; Niu, Li-Hua; Yuan, Feng-Hui; Guan, De-Xin; Wang, An-Zhi; Jin, Chang-Jie; Wu, Jia-Bing

    2012-11-01

    By using Granier' s thermal dissipation probe, the sap flow of poplar in a poplar-maize agroforestry system in west Liaoning was continuously measured, and as well, the environmental factors such as air temperature, air humidity, net radiation, wind speed, soil temperature, and soil moisture content were synchronically measured. Based on the sap flow data, the canopy conductance of poplar was calculated with simplified Penman-Monteith equation. In the study area, the diurnal variation of poplar' s canopy conductance showed a "single peak" curve, whereas the seasonal variation showed a decreasing trend. There was a negative logarithm relationship between the canopy conductance and vapor pressure deficit, with the sensitivity of canopy conductance to vapor pressure deficit change decreased gradually from May to September. The canopy conductance had a positive relationship with solar radiation. In different months, the correlation degree of canopy conductance with environmental factors differed. The vapor pressure deficit in the whole growth period of poplar was the most significant environmental factor correlated with the canopy conductance.

  13. The influence of multi-season imagery on models of canopy cover: A case study

    Science.gov (United States)

    John W. Coulston; Dennis M. Jacobs; Chris R. King; Ivey C. Elmore

    2013-01-01

    Quantifying tree canopy cover in a spatially explicit fashion is important for broad-scale monitoring of ecosystems and for management of natural resources. Researchers have developed empirical models of tree canopy cover to produce geospatial products. For subpixel models, percent tree canopy cover estimates (derived from fine-scale imagery) serve as the response...

  14. Effects of Fetch on Turbulent Flow and Pollutant Dispersion Within a Cubical Canopy

    Science.gov (United States)

    Michioka, Takenobu; Takimoto, Hiroshi; Ono, Hiroki; Sato, Ayumu

    2018-03-01

    The effects of fetch on turbulent flow and pollutant dispersion within a canopy formed by regularly-spaced cubical objects is investigated using large-eddy simulation. Six tracer gases are simultaneously released from a ground-level continuous pollutant line source placed parallel to the spanwise axis at the first, second, third, fifth, seventh and tenth rows. Beyond the seventh row, the standard deviations of the fluctuations in the velocity components and the Reynolds shear stresses reach nearly equivalent states. Low-frequency turbulent flow is generated near the bottom surface around the first row and develops as the fetch increases. The turbulent flow eventually passes through the canopy at a near-constant interval. The mean concentration within the canopy reaches a near-constant value beyond the seventh row. In the first and second rows, narrow coherent structures frequently affect the pollutant escape from the top of the canopy. These structures increase in width as the fetch increases, and they mainly affect the removal of pollutants from the canopy.

  15. Remote measurement of canopy water content in giant sequoias (Sequoiadendron giganteum) during drought

    Science.gov (United States)

    Martin, Roberta E.; Asner, Gregory P.; Francis, Emily; Ambrose, Anthony; Baxter, Wendy; Das, Adrian J.; Vaughn, Nicolas R.; Paz-Kagan, Tarin; Dawson, Todd E.; Nydick, Koren R.; Stephenson, Nathan L.

    2018-01-01

    California experienced severe drought from 2012 to 2016, and there were visible changes in the forest canopy throughout the State. In 2014, unprecedented foliage dieback was recorded in giant sequoia (Sequoiadendron giganteum) trees in Sequoia National Park, in the southern California Sierra Nevada mountains. Although visible changes in sequoia canopies can be recorded, biochemical and physiological responses to drought stress in giant sequoia canopies are not well understood. Ground-based measurements provide insight into the mechanisms of drought responses in trees, but are often limited to few individuals, especially in trees of tall stature such as giant sequoia. Recent studies demonstrate that remotely measured forest canopy water content (CWC) is a general indicator of canopy response to drought, but the underpinning leaf- to canopy-level causes of observed variation in CWC remain poorly understood. We combined field and airborne remote sensing measurements taken in 2015 and 2016 to assess the biophysical responses of giant sequoias to drought. In 49 study trees, CWC was related to leaf water potential, but not to the other foliar traits, suggesting that changes in CWC were made at whole-canopy rather than leaf scales. We found a non-random, spatially varying pattern in mapped CWC, with lower CWC values at lower elevation and along the outer edges of the groves. This pattern was also observed in empirical measurements of foliage dieback from the ground, and in mapped CWC across multiple sequoia groves in this region, supporting the hypothesis that drought stress is expressed in canopy-level changes in giant sequoias. The fact that we can clearly detect a relationship between CWC and foliage dieback, even without taking into account prior variability or new leaf growth, strongly suggests that remotely sensed CWC, and changes in CWC, are a useful measure of water stress in giant sequoia, and valuable for assessing and managing these iconic forests in drought.

  16. Stomatal Conductance, Plant Hydraulics, and Multilayer Canopies: A New Paradigm for Earth System Models or Unnecessary Uncertainty

    Science.gov (United States)

    Bonan, G. B.

    2016-12-01

    Soil moisture stress is a key regulator of canopy transpiration, the surface energy budget, and land-atmosphere coupling. Many land surface models used in Earth system models have an ad-hoc parameterization of soil moisture stress that decreases stomatal conductance with soil drying. Parameterization of soil moisture stress from more fundamental principles of plant hydrodynamics is a key research frontier for land surface models. While the biophysical and physiological foundations of such parameterizations are well-known, their best implementation in land surface models is less clear. Land surface models utilize a big-leaf canopy parameterization (or two big-leaves to represent the sunlit and shaded canopy) without vertical gradients in the canopy. However, there are strong biometeorological and physiological gradients in plant canopies. Are these gradients necessary to resolve? Here, I describe a vertically-resolved, multilayer canopy model that calculates leaf temperature and energy fluxes, photosynthesis, stomatal conductance, and leaf water potential at each level in the canopy. In this model, midday leaf water stress manifests in the upper canopy layers, which receive high amounts of solar radiation, have high leaf nitrogen and photosynthetic capacity, and have high stomatal conductance and transpiration rates (in the absence of leaf water stress). Lower levels in the canopy become water stressed in response to longer-term soil moisture drying. I examine the role of vertical gradients in the canopy microclimate (solar radiation, air temperature, vapor pressure, wind speed), structure (leaf area density), and physiology (leaf nitrogen, photosynthetic capacity, stomatal conductance) in determining above canopy fluxes and gradients of transpiration and leaf water potential within the canopy.

  17. Carbon isotope discrimination, ash, and canopy temperature in three wheatgrass species

    International Nuclear Information System (INIS)

    Frank, A.B.; Ray, I.M.; Berdahl, R.D.; Karn, J.F.

    1997-01-01

    Soil water is the main factor influencing forage production in the semiarid Northern Great Plains. Developing germplasm that uses limited water more efficiently would benefit forage production for hay and livestock grazing. Development of selection criteria suited to screening large breeding populations for water-use efficiency (WUE) are needed to enhance this effort. This study evaluated carbon isotope discrimination (delta), tissue ash concentration, and canopy temperature of populations of diploid crested wheatgrass (Agropyron cristatum L.), tetraploid crested wheatgrass [A. desertorum (Fisch. ex. Link) Schult.], and western wheatgrass [Pascopyrum smithii (Rybd.) Love] to determine the utility of using ash concentration and canopy temperature as alternative criteria to delta for selecting plants with high WUE. Tissue ash concentration, canopy temperature, and delta were measured on half-sib families from genetically broad-based populations of each species across two field growing seasons. Sufficient genetic variation was present for delta and ash concentration among families within each species to suggest possible use of these traits as criteria for selecting plants with higher WUE. Differences in canopy temperature among families were present only in 1994. Correlations between ash and delta were greatest for tetraploid crested wheatgrass and least for western wheatgrass. Correlation of canopy temperature with delta was significant for tetraploid crested wheatgrass both years and for diploid crested wheatgrass in 1993, but neither year for western wheatgrass. Ash concentration and delta were moderately heritable in all three grass populations, indicating that both traits are under genetic control and could likely be altered through breeding. Using ash and canopy temperature as criteria for selecting plants with greater WUE would provide a relatively low-cost, simple approach to develop cultivars with improved WUE

  18. Ecological aspects of Lebiasina erythrinoides (Characiformes: Lebiasinidae from an andean piedmont stream in Colombia

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    Javier Alejandro Maldonado Ocampo

    2016-03-01

    Full Text Available The present study describes ecological aspects of Lebiasina erythrinoides; 200 individuals were sampled throughout an annual hydrological cycle from October 2008 to September 2009 in La Calaboza stream, a Piedmont tributary of the Rio Cravo Sur. The studied population had more females than males (1.5:1 and preferred habitats dominated by shoreline vegetation and rocky substrates. Prior to reproductive events, individuals presented an increase in the condition factor (K and the gonosomatic index (GSI. On average, 648.8 oocytes are discharged twice a year: at the beginning of the rainy season, and during falling water phase. The mean sizes at sexual maturity found for females were 73.5 mm standard length (SL and for males 70 mm SL. Rounding up, an average minimum size of capture of 75 mm SL is proposed. Most specimens of the population (65 % were found to be maturing or mature (stages II and III, 28.5 % immature (stage I, 5.0 % in post reproduction stage V, and 1.5 % in reproductive phase (IV. Results suggest this species is omnivorous with a preference for invertebrates (IRI = 41.2 % and vegetal material (IRI = 27.8 %, but also includes a variety of other items. The values of the diet are correlated with hydrological cycle and size.

  19. Spectral measurements at different spatial scales in potato: relating leaf, plant and canopy nitrogen status

    Science.gov (United States)

    Jongschaap, Raymond E. E.; Booij, Remmie

    2004-09-01

    Chlorophyll contents in vegetation depend on soil nitrogen availability and on crop nitrogen uptake, which are important management factors in arable farming. Crop nitrogen uptake is important, as nitrogen is needed for chlorophyll formation, which is important for photosynthesis, i.e. the conversion of absorbed radiance into plant biomass. The objective of this study was to estimate leaf and canopy nitrogen contents by near and remote sensing observations and to link observations at leaf, plant and canopy level. A theoretical base is presented for scaling-up leaf optical properties to whole plants and crops, by linking different optical recording techniques at leaf, plant and canopy levels through the integration of vertical nitrogen distribution. Field data come from potato experiments in The Netherlands in 1997 and 1998, comprising two potato varieties: Eersteling and Bintje, receiving similar nitrogen treatments (0, 100, 200 and 300 kg N ha -1) in varying application schemes to create differences in canopy nitrogen status during the growing season. Ten standard destructive field samplings were performed to follow leaf area index and crop dry weight evolution. Samples were analysed for inorganic nitrogen and total nitrogen contents. At sampling dates, spectral measurements were taken both at leaf level and at canopy level. At leaf level, an exponential relation between SPAD-502 readings and leaf organic nitrogen contents with a high correlation factor of 0.91 was found. At canopy level, an exponential relation between canopy organic nitrogen contents and red edge position ( λrep, nm) derived from reflectance measurements was found with a good correlation of 0.82. Spectral measurements (SPAD-502) at leaf level of a few square mm were related to canopy reflectance measurements (CropScan™) of approximately 0.44 m 2. Statistical regression techniques were used to optimise theoretical vertical nitrogen profiles that allowed scaling-up leaf chlorophyll measurements

  20. A canopy trimming experiment in Puerto Rico: the response of litter invertebrate communities to canopy loss and debris deposition in a tropical forest subject to hurricanes

    Science.gov (United States)

    Barbara A. Richardson; Michael J. Richardson; Grizelle Gonzalez; Aaron B. Shiels; Diane S. Srivastava

    2010-01-01

    Hurricanes cause canopy removal and deposition of pulses of litter to the forest floor. A Canopy Trimming Experiment (CTE) was designed to decouple these two factors, and to investigate the separate abiotic and biotic consequences of hurricane-type damage and monitor recovery processes. As part of this experiment, effects on forest floor invertebrate communities were...

  1. Coherence Effects in L-Band Active and Passive Remote Sensing of Quasi-Periodic Corn Canopies

    Science.gov (United States)

    Utku, Cuneyt; Lang, Roger H.

    2011-01-01

    Due to their highly random nature, vegetation canopies can be modeled using the incoherent transport theory for active and passive remote sensing applications. Agricultural vegetation canopies however are generally more structured than natural vegetation. The inherent row structure in agricultural canopies induces coherence effects disregarded by the transport theory. The objective of this study is to demonstrate, via Monte-Carlo simulations, these coherence effects on L-band scattering and thermal emission from corn canopies consisting of only stalks.

  2. Rapid assessment of forest canopy and light regime using smartphone hemispherical photography.

    Science.gov (United States)

    Bianchi, Simone; Cahalan, Christine; Hale, Sophie; Gibbons, James Michael

    2017-12-01

    Hemispherical photography (HP), implemented with cameras equipped with "fisheye" lenses, is a widely used method for describing forest canopies and light regimes. A promising technological advance is the availability of low-cost fisheye lenses for smartphone cameras. However, smartphone camera sensors cannot record a full hemisphere. We investigate whether smartphone HP is a cheaper and faster but still adequate operational alternative to traditional cameras for describing forest canopies and light regimes. We collected hemispherical pictures with both smartphone and traditional cameras in 223 forest sample points, across different overstory species and canopy densities. The smartphone image acquisition followed a faster and simpler protocol than that for the traditional camera. We automatically thresholded all images. We processed the traditional camera images for Canopy Openness (CO) and Site Factor estimation. For smartphone images, we took two pictures with different orientations per point and used two processing protocols: (i) we estimated and averaged total canopy gap from the two single pictures, and (ii) merging the two pictures together, we formed images closer to full hemispheres and estimated from them CO and Site Factors. We compared the same parameters obtained from different cameras and estimated generalized linear mixed models (GLMMs) between them. Total canopy gap estimated from the first processing protocol for smartphone pictures was on average significantly higher than CO estimated from traditional camera images, although with a consistent bias. Canopy Openness and Site Factors estimated from merged smartphone pictures of the second processing protocol were on average significantly higher than those from traditional cameras images, although with relatively little absolute differences and scatter. Smartphone HP is an acceptable alternative to HP using traditional cameras, providing similar results with a faster and cheaper methodology. Smartphone

  3. Can Andean medicine coexist with biomedical healthcare? A comparison of two rural communities in Peru and Bolivia

    Directory of Open Access Journals (Sweden)

    Mathez-Stiefel Sarah-Lan

    2012-07-01

    Full Text Available Abstract Background It is commonly assumed that indigenous medical systems remain strong in developing countries because biomedicine is physically inaccessible or financially not affordable. This paper compares the health-seeking behavior of households from rural Andean communities at a Peruvian and a Bolivian study site. The main research question was whether the increased presence of biomedicine led to a displacement of Andean indigenous medical practices or to coexistence of the two healing traditions. Methodology Open-ended interviews and free listing exercises were conducted between June 2006 and December 2008 with 18 households at each study site. Qualitative identification of households’ therapeutic strategies and use of remedies was carried out by means of content analysis of interview transcriptions and inductive interference. Furthermore, a quantitative assessment of the incidence of culture-bound illnesses in local ethnobiological inventories was performed. Results Our findings indicate that the health-seeking behavior of the Andean households in this study is independent of the degree of availability of biomedical facilities in terms of quality of services provided, physical accessibility, and financial affordability, except for specific practices such as childbirth. Preference for natural remedies over pharmaceuticals coexists with biomedical healthcare that is both accessible and affordable. Furthermore, our results show that greater access to biomedicine does not lead to less prevalence of Andean indigenous medical knowledge, as represented by the levels of knowledge about culture-bound illnesses. Conclusions The take-home lesson for health policy-makers from this study is that the main obstacle to use of biomedicine in resource-poor rural areas might not be infrastructural or economic alone. Rather, it may lie in lack of sufficient recognition by biomedical practitioners of the value and importance of indigenous medical systems

  4. Examining conifer canopy structural complexity across forest ages and elevations with LiDAR data

    Science.gov (United States)

    Van R. Kane; Jonathan D. Bakker; Robert J. McGaughey; James A. Lutz; Rolf F. Gersonde; Jerry F. Franklin

    2010-01-01

    LiDAR measurements of canopy structure can be used to classify forest stands into structural stages to study spatial patterns of canopy structure, identify habitat, or plan management actions. A key assumption in this process is that differences in canopy structure based on forest age and elevation are consistent with predictions from models of stand development. Three...

  5. Biotic diversity of benthic macroinvertebrates at contrasting glacier-fed systems in Patagonia Mountains: The role of environmental heterogeneity facing global warming.

    Science.gov (United States)

    Miserendino, María Laura; Brand, Cecilia; Epele, Luis B; Di Prinzio, Cecilia Y; Omad, Guillermo H; Archangelsky, Miguel; Martínez, Oscar; Kutschker, Adriana M

    2018-05-01

    Patagonia is by far the largest glacierized area in South America. However, little is known about ecology, functioning and biodiversity of glacier-fed streams facing global warming. We investigated changes in environmental features and macroinvertebrate communities along a longitudinal gradient of glacier influence of two Patagonian systems that differ in glacier cover magnitude and the spatial sequence of lotic and lentic phases. Both glaciers, Torrecillas (~5.5km 2 , Torrecillas system) and Cónico (~0.44km 2 , Baggilt system), are retreating. Longitudinal distribution of benthic invertebrates partially fitted to predictions for glacierized temperate systems, with Diamesinae spp. dominating at closest sites to the Cónico, and Orthocladiinae increasing downstream, but patterns were unclear at Torrecillas. Generalized Linear Model identified chlorophyll a and conductivity as having significant effect on richness and density respectively at Torrecillas; detritus biomass and gravel influenced species richness, and boulder percentage and water temperature affected density, at Baggilt. Canonical Correspondence Analyses integrating benthic biota and environmental variables revealed that a higher environmental heterogeneity at Baggilt, related with spatial dimension (unshaded/shaded reaches, wetland reaches), local resources (detritus, bryophytes) and temperature, probably explained the unexpected high richness in benthic assemblages (67 taxa). Environmental conditions imposed by the lake outlet (proglacial) at Torrecillas resulted in a less diverse community (31 taxa). Finally our results suggest that these isolated, small glacier-fed streams typical of the Patagonian landscape appear highly vulnerable to global warming. Endemic elements could disappear at upper segments being replaced by other species common at rhithral environments, which might increase local diversity (alfa diversity) but decrease regional diversity (gamma diversity). From an ecosystem perspective

  6. Progress and turning points in legal development of native forests protection at the argentine provincial and uruguayan jurisdictions

    Directory of Open Access Journals (Sweden)

    Clara María Minaverry

    2017-04-01

    Full Text Available The general purpose of this paper is to investigate native forests protection regulatory development level, in a selection of argentine provinces in possession of valuable ecosystem forest´s resources, such as the Andean-Patagonian ones. The especial objectives are: To state if provincial regulations have complied with national native forests environmental protection law 26.331 (and if it regulates water resources, and to make a comparative analysis with Uruguay. This is an exploratory research, where analytical comparative method and legal hermeneutics were applied to this study. We could conclude that law 26.331 exceeded some of the selected argentine provincial regulations outlines, and that Uruguay does not have enough regulatory development in order to make an overall comparative analysis.

  7. Spatial Structure of Soil Macrofauna Diversity and Tree Canopy in Riparian Forest of Maroon River

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    Ehsan Sayad

    2017-02-01

    Full Text Available Introduction: Sustainability and maintenance of riparian vegetation or restoring of degraded sites is critical to sustain inherent ecosystem function and values. Description of patterns in species assemblages and diversity is an essential step before generating hypotheses in functional ecology. If we want to have information about ecosystem function, soil biodiversity is best considered by focusing on the groups of soil organisms that play major roles in ecosystem functioning when exploring links with provision of ecosystem services. Information about the spatial pattern of soil biodiversity at the regional scale is limited though required, e.g. for understanding regional scale effects of biodiversity on ecosystem processes. The practical consequences of these findings are useful for sustainable management of soils and in monitoring soil quality. Soil macrofauna play significant, but largely ignored roles in the delivery of ecosystem services by soils at plot and landscape scales. One main reason responsible for the absence of information about biodiversity at regional scale is the lack of adequate methods for sampling and analyzing data at this dimension. An adequate approach for the analysis of spatial patterns is a transect study in which samples are taken in a certain order and with a certain distance between samples. Geostatistics provide descriptive tools such as variogram to characterize the spatial pattern of continuous and categorical soil attributes. This method allows assessment of consistency of spatial patterns as well as the scale at which they are expressed. This study was conducted to analyze spatial patterns of soil macrofauna in relation to tree canopy in the riparian forest landscape of Maroon. Materilas and Methods: The study was carried out in the Maroon riparian forest of the southeasternIran (30o 38/- 30 o 39/ N and 50 o 9/- 50 o 10/ E. The climate of the study area is semi-arid. Average yearly rainfall is about 350.04 mm

  8. Effects of Corn Canopy on Seedling Emergence of Seven Weed Species

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    F Kordbacheh

    2012-02-01

    Full Text Available In this research corn were planted in 3 densities (8, 12, 16 plant/m2 in two planting patterns (single and double-row with seven summer weed species, including redroot pigweed, green foxtail, annual bluegrass, common lambsquarter, jimsonweed, black nightshade and johnsongrass were planted. Temperature, quality and quantity of light reaching to soil surface were measured and the number of emerged seedlings for each weed species was countered in three sampling dates. Temperature fluctuation wasn't affected by density and planting patterns and was reduced with canopy formation. In all weed species 3 seedling emergence patterns were observed. In small seed species, redroot pigweed had one germination flush, so it was not respond to crop canopy. The number of emerged weed seedlings of annual bluegrass, common lambsquarter and green foxtail were significantly higher in bareground than under corn canopy. In double-row planting pattern was higher compared to the single-row and had three germination flushes. The number of emerged seedlings in the species with relatively large seeds had no significant difference between bareground and under corn canopy in jimsonweed and black nightshade. But it increased in johnsongrass under corn canopy compare to the bare ground. In all three species it was higher in double-row compare to single-row pattern. Jimsonweed had three germination flushes but blacknightshade and johnsongrass had 1 germination flush.

  9. Forecasting Andean rainfall and crop yield from the influence of El Nino on Pleiades visibility

    Science.gov (United States)

    Orlove; Chiang; Cane

    2000-01-06

    Farmers in drought-prone regions of Andean South America have historically made observations of changes in the apparent brightness of stars in the Pleiades around the time of the southern winter solstice in order to forecast interannual variations in summer rainfall and in autumn harvests. They moderate the effect of reduced rainfall by adjusting the planting dates of potatoes, their most important crop. Here we use data on cloud cover and water vapour from satellite imagery, agronomic data from the Andean altiplano and an index of El Nino variability to analyse this forecasting method. We find that poor visibility of the Pleiades in June-caused by an increase in subvisual high cirrus clouds-is indicative of an El Nino year, which is usually linked to reduced rainfall during the growing season several months later. Our results suggest that this centuries-old method of seasonal rainfall forecasting may be based on a simple indicator of El Nino variability.

  10. Effects of diffuse radiation on canopy gas exchange processes in a forest ecosystem

    Science.gov (United States)

    Knohl, Alexander; Baldocchi, Dennis D.

    2008-06-01

    Forest ecosystems across the globe show an increase in ecosystem carbon uptake efficiency under conditions with high fraction of diffuse radiation. Here, we combine eddy covariance flux measurements at a deciduous temperate forest in central Germany with canopy-scale modeling using the biophysical multilayer model CANVEG to investigate the impact of diffuse radiation on various canopy gas exchange processes and to elucidate the underlying mechanisms. Increasing diffuse radiation enhances canopy photosynthesis by redistributing the solar radiation load from light saturated sunlit leaves to nonsaturated shade leaves. Interactions with atmospheric vapor pressure deficit and reduced leaf respiration are only of minor importance to canopy photosynthesis. The response strength of carbon uptake to diffuse radiation depends on canopy characteristics such as leaf area index and leaf optical properties. Our model computations shows that both canopy photosynthesis and transpiration increase initially with diffuse fraction, but decrease after an optimum at a diffuse fraction of 0.45 due to reduction in global radiation. The initial increase in canopy photosynthesis exceeds the increase in transpiration, leading to a rise in water-use-efficiency. Our model predicts an increase in carbon isotope discrimination with water-use-efficiency resulting from differences in the leaf-to-air vapor pressure gradient and atmospheric vapor pressure deficit. This finding is in contrast to those predicted with simple big-leaf models that do not explicitly calculate leaf energy balance. At an annual scale, we estimate a decrease in annual carbon uptake for a potential increase in diffuse fraction, since diffuse fraction was beyond the optimum for 61% of the data.

  11. Research Priorities for the Conservation and Sustainable Governance of Andean Forest Landscapes

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    Sarah-Lan Mathez-Stiefel

    2017-08-01

    Full Text Available The long-term survival of Andean forest landscapes (AFL and of their capacity to contribute to sustainable development in a context of global change requires integrated adaptation and mitigation responses informed by a thorough understanding of the dynamic and complex interactions between their ecological and social components. This article proposes a research agenda that can help guide AFL research efforts for the next 15 years. The agenda was developed between July 2015 and June 2016 through a series of workshops in Ecuador, Peru, and Switzerland and involved 48 researchers and development experts working on AFL from different disciplinary perspectives. Based on our review of current research and identification of pressing challenges for the conservation and sustainable governance of AFL, we propose a conceptual framework that draws on sustainability sciences and social–ecological systems research, and we identify a set of high-priority research goals and objectives organized into 3 broad categories: systems knowledge, target knowledge, and transformation knowledge. This paper is intended to be a reference for a broad array of actors engaged in policy, research, and implementation in the Andean region. We hope it will trigger collaborative research initiatives for the continued conservation and sustainable governance of AFL.

  12. Ecophysiological Remote Sensing of Leaf-Canopy Photosynthetic Characteristics in a Cool-Temperate Deciduous Forest in Japan

    Science.gov (United States)

    Noda, H. M.; Muraoka, H.

    2014-12-01

    Satellite remote sensing of structure and function of canopy is crucial to detect temporal and spatial distributions of forest ecosystems dynamics in changing environments. The spectral reflectance of the canopy is determined by optical properties (spectral reflectance and transmittance) of single leaves and their spatial arrangements in the canopy. The optical properties of leaves reflect their pigments contents and anatomical structures. Thus detailed information and understandings of the consequence between ecophysiological traits and optical properties from single leaf to canopy level are essential for remote sensing of canopy ecophysiology. To develop the ecophysiological remote sensing of forest canopy, we have been promoting multiple and cross-scale measurements in "Takayama site" belonging to AsiaFlux and JaLTER networks, located in a cool-temperate deciduous broadleaf forest on a mountainous landscape in Japan. In this forest, in situ measurement of canopy spectral reflectance has been conducted continuously by a spectroradiometer as part of the "Phenological Eyes Network (PEN)" since 2004. To analyze the canopy spectral reflectance from leaf ecophysiological viewpoints, leaf mass per area, nitrogen content, chlorophyll contents, photosynthetic capacities and the optical properties have been measured for dominant canopy tree species Quercus crispla and Betula ermanii throughout the seasons for multiple years.Photosynthetic capacity was largely correlated with chlorophyll contents throughout the growing season in both Q. crispla and B. ermanii. In these leaves, the reflectance at "red edge" (710 nm) changed by corresponding to the changes of chlorophyll contents throughout the seasons. Our canopy-level examination showed that vegetation indices obtained by red edge reflectance have linear relationship with leaf chlorophyll contents and photosynthetic capacity. Finally we apply this knowledge to the Rapid Eye satellite imagery around Takayama site to scale

  13. Individual variation in habitat use in two stream fish assemblages

    Directory of Open Access Journals (Sweden)

    Luisa Resende Manna

    2015-12-01

    Full Text Available The habitat use is an individual choice that is influenced by physical conditions such as substrate type, food resources availability and adequate depth. However, habitat use is often measured only through interspecific variability because intraspecific variability is supposed to be low. Here, the differences in habitat use by two stream fish assemblages in two different environments (Brazilian rainforest and semiarid were investigated at both interspecific and intraspecific levels. We performed 55 hours of underwater observation in a 200 meters long stretch in each stream and quantified the following habitat descriptors: (i water velocity, (ii distance from the stream bank, (iii substratum, (iv water column depth, (v aquatic cover, and (vi canopy percentage. To compare intra and interspecific variability we summarized the multivariate habitat use databases using Principal Components Analysis (PCA on Euclidean distance. An Analysis of Similarity (ANOSIM was performed to test the differences in habitat use by the two assemblages. Besides, in each fish community we did an Analysis of Variance (ANOVA to test within vs between species variability for individual position on each PCA axes. To go further than these univariate tests, the differences among the species and assemblages were tested with Permutational Multivariate Analysis of Variance (PERMANOVA. The habitat use between assemblages was significantly different (ANOSIM – R=0.14; p<0.001. PERMANOVA revealed significant differences among species in both assemblages (Rainforest - F=7.25; p<0.001; semiarid - F=4.84; p<0.001. Lower F values in the semiarid assemblage revealed a higher level of intraspecific variability for this assemblage. Our findings showed high intra and interspecific variability in both stream fish assemblages and highlight the importance of measuring individual’s differences for this feature of fish biodiversity. Additionally, the versatility described for tropical

  14. Streams with Strahler Stream Order

    Data.gov (United States)

    Minnesota Department of Natural Resources — Stream segments with Strahler stream order values assigned. As of 01/08/08 the linework is from the DNR24K stream coverages and will not match the updated...

  15. Diversity of Andean amphibians of the Tamá National Natural Park in Colombia: a survey for the presence of Batrachochytrium dendrobatidis

    Energy Technology Data Exchange (ETDEWEB)

    Acevedo, A.A.; Franco, R.; Carrero, D.A.

    2016-07-01

    Changes in diversity and possible decreases in populations of amphibians have not yet been determined in many areas in the Andes. This study aimed to develop an inventory of the biodiversity of amphibians in the Andean areas of the Tamá National Natural Park (Tamá NNP) and to evaluate the patterns of infection by Batrachochytrium dendrobatidis (Bd) in preserved and degraded areas. We performed samplings focused on three habitats (forest, open areas and streams) in four localities from 2,000 to 3,200 m in altitude. Fourteen species were recorded, 12 of which were positive for Bd. A total of 541 individuals were diagnosed and 100 were positive. Our analyses showed that preserved areas play an important role in keeping many individuals Bd–free as compared to those in degraded areas. This was the first study to evaluate diversity and infection by Bd in the northeast region of Colombia. Our findings may help improve our knowledge of the diversity of amphibian species in the area and facilitate the implementation of action plans to mitigate the causes associated with the decrease in amphibian populations. (Author)

  16. Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest.

    Energy Technology Data Exchange (ETDEWEB)

    Horn, Scott; Hanula, James L.; Ulyshen, Michael D.; Kilgo, John C.

    2005-01-01

    Horn, Scott, James L. Hanula, Michael D. Ulyshen, and John C. Kilgo. 2005. Abundance of green tree frogs and insects in artificial canopy gaps in a bottomland hardwood forest. Am. Midl. Nat. 153:321-326. Abstract: We found more green tree frogs (Hyla cinerea) in canopy gaps than in closed canopy forest. Of the 331 green tree frogs observed, 88% were in canopy gaps. Likewise, higher numbers and biomasses of insects were captured in the open gap habitat. Flies were the most commonly collected insect group accounting for 54% of the total capture. These data suggest that one reason green tree frogs were more abundant in canopy gaps was the increased availability of prey and that small canopy gaps provide early successional habitats that are beneficial to green tree frog populations.

  17. Worldwide variation in within-canopy photosynthetic acclimation: differences in temporal and environmental controls among plant functional types

    Science.gov (United States)

    Niinemets, Ülo; Keenan, Trevor

    2017-04-01

    Major light gradients, characteristically 10- to 50-fold, constitute the most prominent feature of plant canopies. These gradients drive within-canopy variation in foliage structural, chemical and physiological traits. As a key acclimation response to variation in light availability, foliage photosynthetic capacity per area (Aarea) increases with increasing light availability within the canopy, maximizing whole canopy photosynthesis. Recently, a worldwide database including 831 within-canopy gradients with standardized light estimates for 304 species belonging to major vascular plant functional types was constructed and within-canopy variation in photosynthetic acclimation was characterized (Niinemets Ü, Keenan TF, Hallik L (2015) Tansley review. A worldwide analysis of within-canopy variations in leaf structural, chemical and physiological traits across plant functional types. The New Phytologist 205: 973-993). However, the understanding of how within-canopy photosynthetic gradients vary during the growing season and in response to site and stand characteristics is still limited. Here we analyzed temporal, environmental and site (nutrient availability, stand density, ambient CO2 concentration, water availability) sources of variation in within-canopy photosynthetic acclimation in different plant functional types. Variation in key structural (leaf dry mass per unit area, MA), chemical (nitrogen content per dry mass, NM, and area, NA) and physiological (photosynthetic nitrogen use efficiency, EN) photosynthetic capacity per dry mass, Amass and area, Aarea) was examined. The analysis demonstrates major, typically 1.5-2-fold, time-, environment and site-dependent modifications in within-canopy variation in foliage photosynthetic capacity. However, the magnitude and direction of temporal and environmental variations in plasticity significantly varied among functional types. Species with longer leaf life span and low rates of canopy expansion or flush-type canopy

  18. The role of the hydrological cycle on the temporal patterns of macroinvertebrate assemblages in an Andean foothill stream in Colombia

    Directory of Open Access Journals (Sweden)

    María I. Ríos-Pulgarín

    2016-03-01

    Full Text Available The seasonal and interannual changes in the structure, composition and functional feeding groups of the macroinvertebrate assemblage of the Guarinó River, a torrential system located in the Colombian Andean foothills, were examined in relation to the physical and chemical environmental changes associated with the hydrological cycle and the El Niño-Niña/Southern Oscillation (ENSO between 2007 and 2010. Benthic samples were collected at three sites in the lower sections of the river. A total of 127 taxa were collected in the study, with the total taxonomic richness per site ranging from 82 to 96 taxa and benthos density averaging 5.41 ind. m-2. The density showed a tendency to decrease in periods of maximum river level and flow, particularly during La Niña phenomena, and to increase in dry periods, especially in the third year (2009-2010 during El Niño phenomena. The presence and abundance of taxa, functional feeding groups and life habits were regulated by environmental parameters associated with hydrological variability, derived of ENSO phenomena, especially flow rate values. The assemblage showed high taxonomic and functional diversity, which is characteristic of ecosystems affected by recurrent hydrological disturbances, exhibiting differentiated responses based on adaptive strategies against the local hydrologic regime that allow fast recovery under conditions like ENSO phenomena. Such responses include composition changes according to adaptations to different hydrological scenarios, the predominance of generalist trophic guilds and taxa with plasticity in their habits and range of environmental tolerance.

  19. LBA-ECO LC-15 Aerodynamic Roughness Maps of Vegetation Canopies, Amazon Basin: 2000

    Data.gov (United States)

    National Aeronautics and Space Administration — This data set, LBA-ECO LC-15 Aerodynamic Roughness Maps of Vegetation Canopies, Amazon Basin: 2000, provides physical roughness maps of vegetation canopies in the...

  20. Leaf Phenology of Amazonian Canopy Trees as Revealed by Spectral and Physiochemical Measurements

    Science.gov (United States)

    Chavana-Bryant, C.; Gerard, F. F.; Malhi, Y.; Enquist, B. J.; Asner, G. P.

    2013-12-01

    The phenological dynamics of terrestrial ecosystems reflect the response of the Earth's biosphere to inter- and intra-annual dynamics of climatic and hydrological regimes. Some Dynamic Global Vegetation Models (GDVMs) have predicted that by 2050 the Amazon rainforest will begin to dieback (Cox et al. 2000, Nature) or that the ecosystem will become unsustainable (Salazar et al. 2007, GRL). One major component in DGVMs is the simulation of vegetation phenology, however, modelers are challenged with the estimation of tropical phenology which is highly complex. Current modeled phenology is based on observations of temperate vegetation and accurate representation of tropical phenology is long overdue. Remote sensing (RS) data are a key tool in monitoring vegetation dynamics at regional and global scales. Of the many RS techniques available, time-series analysis of vegetation indices (VIs) has become the most common approach in monitoring vegetation phenology (Samanta et al. 2010, GRL; Bradley et al. 2011, GCB). Our research focuses on investigating the influence that age related variation in the spectral reflectance and physiochemical properties of leaves may have on VIs of tropical canopies. In order to do this, we collected a unique leaf and canopy phenological dataset at two different Amazonian sites: Inselberg, French Guyana (FG) and Tambopata, Peru (PE). Hyperspectral reflectance measurements were collected from 4,102 individual leaves sampled to represent different leaf ages and vertical canopy positions (top, mid and low canopy) from 20 different canopy tree species (8 in FG and 12 in PE). These leaf spectra were complemented with 1) leaf physical measurements: fresh and dry weight, area and thickness, LMA and LWC and 2) leaf chemical measurements: %N, %C, %P, C:N and d13C. Canopy level observations included top-of-canopy reflectance measurements obtained using a multispectral 16-band radiometer, leaf demography (tot. number and age distribution) and branch

  1. Canopy Density Mapping on Ultracam-D Aerial Imagery in Zagros Woodlands, Iran

    Science.gov (United States)

    Erfanifard, Y.; Khodaee, Z.

    2013-09-01

    Canopy density maps express different characteristics of forest stands, especially in woodlands. Obtaining such maps by field measurements is so expensive and time-consuming. It seems necessary to find suitable techniques to produce these maps to be used in sustainable management of woodland ecosystems. In this research, a robust procedure was suggested to obtain these maps by very high spatial resolution aerial imagery. It was aimed to produce canopy density maps by UltraCam-D aerial imagery, newly taken in Zagros woodlands by Iran National Geographic Organization (NGO), in this study. A 30 ha plot of Persian oak (Quercus persica) coppice trees was selected in Zagros woodlands, Iran. The very high spatial resolution aerial imagery of the plot purchased from NGO, was classified by kNN technique and the tree crowns were extracted precisely. The canopy density was determined in each cell of different meshes with different sizes overlaid on the study area map. The accuracy of the final maps was investigated by the ground truth obtained by complete field measurements. The results showed that the proposed method of obtaining canopy density maps was efficient enough in the study area. The final canopy density map obtained by a mesh with 30 Ar (3000 m2) cell size had 80% overall accuracy and 0.61 KHAT coefficient of agreement which shows a great agreement with the observed samples. This method can also be tested in other case studies to reveal its capability in canopy density map production in woodlands.

  2. Algorithm for retrieving vegetative canopy and leaf parameters from multi- and hyperspectral imagery

    Science.gov (United States)

    Borel, Christoph

    2009-05-01

    In recent years hyper-spectral data has been used to retrieve information about vegetative canopies such as leaf area index and canopy water content. For the environmental scientist these two parameters are valuable, but there is potentially more information to be gained as high spatial resolution data becomes available. We developed an Amoeba (Nelder-Mead or Simplex) based program to invert a vegetative canopy radiosity model coupled with a leaf (PROSPECT5) reflectance model and modeled for the background reflectance (e.g. soil, water, leaf litter) to a measured reflectance spectrum. The PROSPECT5 leaf model has five parameters: leaf structure parameter Nstru, chlorophyll a+b concentration Cab, carotenoids content Car, equivalent water thickness Cw and dry matter content Cm. The canopy model has two parameters: total leaf area index (LAI) and number of layers. The background reflectance model is either a single reflectance spectrum from a spectral library() derived from a bare area pixel on an image or a linear mixture of soil spectra. We summarize the radiosity model of a layered canopy and give references to the leaf/needle models. The method is then tested on simulated and measured data. We investigate the uniqueness, limitations and accuracy of the retrieved parameters on canopy parameters (low, medium and high leaf area index) spectral resolution (32 to 211 band hyperspectral), sensor noise and initial conditions.

  3. The influence of current speed and vegetation density on flow structure in two macrotidal eelgrass canopies

    Science.gov (United States)

    Lacy, Jessica R.; Wyllie-Echeverria, Sandy

    2011-01-01

    The influence of eelgrass (Zostera marina) on near-bed currents, turbulence, and drag was investigated at three sites in two eelgrass canopies of differing density and at one unvegetated site in the San Juan archipelago of Puget Sound, Washington, USA. Eelgrass blade length exceeded 1 m. Velocity profiles up to 1.5 m above the sea floor were collected over a spring-neap tidal cycle with a downward-looking pulse-coherent acoustic Doppler profiler above the canopies and two acoustic Doppler velocimeters within the canopies. The eelgrass attenuated currents by a minimum of 40%, and by more than 70% at the most densely vegetated site. Attenuation decreased with increasing current speed. The data were compared to the shear-layer model of vegetated flows and the displaced logarithmic model. Velocity profiles outside the meadows were logarithmic. Within the canopies, most profiles were consistent with the shear-layer model, with a logarithmic layer above the canopy. However, at the less-dense sites, when currents were strong, shear at the sea floor and above the canopy was significant relative to shear at the top of the canopy, and the velocity profiles more closely resembled those in a rough-wall boundary layer. Turbulence was strong at the canopy top and decreased with height. Friction velocity at the canopy top was 1.5–2 times greater than at the unvegetated, sandy site. The coefficient of drag CD on the overlying flow derived from the logarithmic velocity profile above the canopy, was 3–8 times greater than at the unvegetated site (0.01–0.023 vs. 2.9 × 10−3).

  4. Canopy Photosynthesis: From Basics to Applications

    NARCIS (Netherlands)

    Hikosaka, Kouki; Niinemets, Ülo; Anten, N.P.R.

    2016-01-01

    A plant canopy, a collection of leaves, is an ecosystem-level unit of photosynthesis that assimilates carbon dioxide and exchanges other gases and energy with the atmosphere in a manner highly sensitive to ambient conditions including atmospheric carbon dioxide and water vapor concentrations, light

  5. Leaf and Canopy Level Detection of Fusarium Virguliforme (Sudden Death Syndrome in Soybean

    Directory of Open Access Journals (Sweden)

    Ittai Herrmann

    2018-03-01

    Full Text Available Pre-visual detection of crop disease is critical for food security. Field-based spectroscopic remote sensing offers a method to enable timely detection, but still requires appropriate instrumentation and testing. Soybean plants were spectrally measured throughout a growing season to assess the capacity of leaf and canopy level spectral measurements to detect non-visual foliage symptoms induced by Fusarium virguliforme (Fv, which causes sudden death syndrome. Canopy reflectance measurements were made using the Piccolo Doppio dual field-of-view, two-spectrometer (400 to 1630 nm system on a tractor. Leaf level measurements were obtained, in different plots, using a handheld spectrometer (400 to 2500 nm. Partial least squares discriminant analysis (PLSDA was applied to the spectroscopic data to discriminate between Fv-inoculated and control plants. Canopy and leaf spectral data allowed identification of Fv infection, prior to visual symptoms, with classification accuracy of 88% and 91% for calibration, 79% and 87% for cross-validation, and 82% and 92% for validation, respectively. Differences in wavelengths important to prediction by canopy vs. leaf data confirm that there are different bases for accurate predictions among methods. Partial least square regression (PLSR was used on a late-stage canopy level data to predict soybean seed yield, with calibration, cross-validation and validation R2 values 0.71, 0.59 and 0.62 (p < 0.01, respectively, and validation root mean square error of 0.31 t·ha−1. Spectral data from the tractor mounted system are thus sensitive to the expression of Fv root infection at canopy scale prior to canopy symptoms, suggesting such systems may be effective for precision agricultural research and management.

  6. Leaf and canopy photosynthesis of a chlorophyll deficient soybean mutant.

    Science.gov (United States)

    Sakowska, Karolina; Alberti, Giorgio; Genesio, Lorenzo; Peressotti, Alessandro; Delle Vedove, Gemini; Gianelle, Damiano; Colombo, Roberto; Rodeghiero, Mirco; Panigada, Cinzia; Juszczak, Radosław; Celesti, Marco; Rossini, Micol; Haworth, Matthew; Campbell, Benjamin W; Mevy, Jean-Philippe; Vescovo, Loris; Cendrero-Mateo, M Pilar; Rascher, Uwe; Miglietta, Franco

    2018-03-02

    The photosynthetic, optical, and morphological characteristics of a chlorophyll-deficient (Chl-deficient) "yellow" soybean mutant (MinnGold) were examined in comparison with 2 green varieties (MN0095 and Eiko). Despite the large difference in Chl content, similar leaf photosynthesis rates were maintained in the Chl-deficient mutant by offsetting the reduced absorption of red photons by a small increase in photochemical efficiency and lower non-photochemical quenching. When grown in the field, at full canopy cover, the mutants reflected a significantly larger proportion of incoming shortwave radiation, but the total canopy light absorption was only slightly reduced, most likely due to a deeper penetration of light into the canopy space. As a consequence, canopy-scale gross primary production and ecosystem respiration were comparable between the Chl-deficient mutant and the green variety. However, total biomass production was lower in the mutant, which indicates that processes other than steady state photosynthesis caused a reduction in biomass accumulation over time. Analysis of non-photochemical quenching relaxation and gas exchange in Chl-deficient and green leaves after transitions from high to low light conditions suggested that dynamic photosynthesis might be responsible for the reduced biomass production in the Chl-deficient mutant under field conditions. © 2018 John Wiley & Sons Ltd.

  7. Influence of Forest-Canopy Morphology and Relief on Spectral Characteristics of Taiga Forests

    Science.gov (United States)

    Zhirin, V. M.; Knyazeva, S. V.; Eydlina, S. P.

    2017-12-01

    The article deals with the results of a statistical analysis reflecting tendencies (trends) of the relationship between spectral characteristics of taiga forests, indicators of the morphological structure of forest canopy and illumination of the territory. The study was carried out on the example of the model forest territory of the Priangarskiy taiga region of Eastern Siberia (Krasnoyarsk krai) using historical data (forest inventory 1992, Landsat 5 TM 16.06.1989) and the digital elevation model. This article describes a method for determining the quantitative indicator of morphological structure of forest canopy based on taxation data, and the authors propose to subdivide the morphological structure into high complexity, medium complexity, and relatively simple. As a result of the research, dependences of average values of spectral brightness in near and short-wave infrared channels of a Landsat 5 TM image for dark-coniferous, light-coniferous and deciduous forests from the degree of complexity of the forest-canopy structure are received. A high level of variance and maximum brightness average values are marked in green moss (hilocominosa) dark-coniferous and various-grass (larioherbosa) dark-coniferous forests and light-coniferous forests with a complex structure of canopy. The parvifoliate forests are characterized by high values of brightness in stands with a relatively simple structure of the canopy and by a small variance in brightness of any degree of the structure of the canopy complexity. The increase in brightness for the lit slopes in comparison with shaded ones in all stands with a difficult morphological canopy structure is revealed. However, the brightness values of the lit and shaded slopes do not differ for stands with a medium complexity of the structure. It is noted that, in addition to the indicator of the forest-canopy structure, the possible impact on increasing the variance of spectral brightness for the taxation plot has a variability of the

  8. Ozone Flux Measurement and Modelling on Leaf/Shoot and Canopy Scale

    Directory of Open Access Journals (Sweden)

    Ludger Grünhage

    Full Text Available The quantitative study of the ozone effects on agricultural and forest vegetation requires the knowledge of the pollutant dose absorbed by plants via leaf stomata, i.e. the stomatal flux. Nevertheless, the toxicologically effective dose can differ from the stomatal flux because a pool of scavenging and detoxification processes reduce the amount of pollutant responsible of the expression of the harmful effects. The measurement of the stomatal flux is not immediate and the quantification of the effective dose is still troublesome. The paper examines the conceptual aspects of ozone flux measurement and modelling in agricultural and ecological research. The ozone flux paradigm is conceptualized into a toxicological frame and faced at two different scales: leaf/shoot and canopy scales. Leaf and shoot scale flux measurements require gas-exchange enclosure techniques, while canopy scale flux measurements need a micrometeorological approach including techniques such as eddy covariance and the aerodynamical gradient. At both scales, not all the measured ozone flux is stomatal flux. In fact, a not negligible amount of ozone is destroyed on external plant surfaces, like leaf cuticles, or by gas phase reaction with biogenic volatile compounds. The stomatal portion of flux can be calculated from concurrent measurements of water vapour fluxes at both scales. Canopy level flux measurements require very fast sensors and the fulfilment of many conditions to ensure that the measurements made above the canopy really reflect the canopy fluxes (constant flux hypothesis. Again, adjustments are necessary in order to correct for air density fluctuations and sensor-surface alignment break. As far as regards flux modelling, at leaf level the stomatal flux is simply obtained by multiplying the ozone concentration on the leaf with the stomatal conductance predicted by means of physiological models fed by meteorological parameter. At canopy level the stomatal flux is

  9. [Neurological paleopathology in the pre-Columbian cultures of the coast and the Andean plateau (I). Artificial cranial deformation].

    Science.gov (United States)

    Carod Artal, F J; Vázquez Cabrera, C B

    The aim of this work was to study the cranial trepanations and deformations carried out by the ancient Paraca, Huari, Tiahuanaco and Inca cultures. To do so, we conducted a field study involving visits to archaeological remains and anthropological museums on the Andean plateau and the Peruvian coast. Cranial deformation was more common in the Andean regions and was performed by putting little pieces of wood or compressive bandages on newborn infants' heads in order to modify the growth axis of the cranial cavity. Cranial deformations were performed for aesthetic and magic religious reasons, but were also used as a means of ethnic or social identification, as a symbol of nobility or to distinguish the ruling classes. The immediate consequence of such deformation was the modification of the normal process by which the cranial sutures close. There is a significant correlation between the presence of posterior and lateral wormian bones, according to the degree of artificial deformation. The persistence of metopic suture and exostosis of the outer ear canal have been found in 5% of the skulls belonging to pre Columbine mummies. Other paleopathological findings include cranial fractures (7%), porotic hyperostosis (25% of children's skulls), spina bifida occulta, signs of spinal disk arthrosis and Pott's disease. Artificial cranial deformation was a very widespread practice in the Andean regions in pre Columbine times.

  10. Physics in the Andean Countries: A Perspective from Condensed Matter, Novel Materials and Nanotechnology

    Science.gov (United States)

    Prieto, P.

    2009-05-01

    We will discuss the current state of R&D in the fields of condensed matter, novel materials, and nanotechnology in the Andean nations. We will initially consider Latin America and the Caribbean (LAC) to then visualize individual developments, as well as those for the region as a whole in these fields of knowledge in each of the nations constituting the Andean Region (Bolivia, Ecuador, Chile, Venezuela, Peru, and Colombia). Based on Science & Technology watch exercises in the countries involved, along with the Iberian American and Inter-American Science & Technology Network of Indicators (Red de indicadores de Ciencia y Tecnolog'ia (RICYT) iberoamericana e interamericana)1, we will reveal statistical data that will shed light on the development in the fields mentioned. As will be noted, total R&D investment in Latin American and Caribbean countries remained constant since 1997. In spite of having reached a general increase in publications without international collaboration in LAC nations, the countries with greatest research productivity in Latin America (Argentina, Mexico, Brazil, and Chile) have strengthened their international collaboration with the United States, France, Germany, and Italy through close links associated with the formation processes of their researchers. Academic and research integration is evaluated through joint authorship of scientific articles, evidencing close collaboration in fields of research. This principle has been used in the creation of cooperation networks among participating nations. As far as networks of research on condensed matter, novel materials, and nanotechnology, the Andean nations have not consolidated a regional network allowing permanent and effective cooperation in research and technological development; as would be expected, given their idiomatic and cultural similarities, their historical background, and geographical proximity, which have been integrating factors in other research areas or socio-economic aspects. This

  11. Forest canopy structural controls over throughfall affect soil microbial community structure in an epiphyte-laden maritime oak stand

    Science.gov (United States)

    Van Stan, J. T., II; Rosier, C. L.; Schrom, J. O.; Wu, T.; Reichard, J. S.; Kan, J.

    2014-12-01

    Identifying spatiotemporal influences on soil microbial community (SMC) structure is critical to understanding of patterns in nutrient cycling and related ecological services. Since forest canopy structure alters the spatiotemporal patterning of precipitation water and solute supplies to soils (via the "throughfall" mechanism), is it possible changes in SMC structure variability could arise from modifications in canopy elements? Our study investigates this question by monitoring throughfall water and dissolved ion supply to soils beneath a continuum of canopy structure: from a large gap (0% cover) to heavy Tillandsia usneoides L. (Spanish moss) canopy (>90% cover). Throughfall water supply diminished with increasing canopy cover, yet increased washoff/leaching of Na+, Cl-, PO43-, and SO42- from the canopy to the soils (p < 0.01). Presence of T. usneoides diminished throughfall NO3-, but enhanced NH4+, concentrations supplied to subcanopy soils. The mineral soil horizon (0-10 cm) from canopy gaps, bare canopy, and T. usneoides-laden canopy significantly differed (p < 0.05) in soil chemistry parameters (pH, Ca2+, Mg2+, CEC). PCR-DGGE banding patterns beneath similar canopy covers (experiencing similar throughfall dynamics) also produced high similarities per ANalyses Of SIMilarity (ANO-SIM), and clustered together when analyzed by Nonmetric Multidimensional Scaling (NMDS). Correlation analysis of DGGE banding patterns, throughfall dynamics, and soil chemistry yielded significant correlations (p < 0.05) between fungal communities and soil chemical properties significantly differing between canopy cover types (pH: r2 = 0.50; H+ %-base saturation: r2 = 0.48; Ca2+ %-base saturation: r2 = 0.43). Bacterial community structure correlated with throughfall NO3-, NH4+, and Ca2+ concentrations (r2 = 0.37, p = 0.16). These results suggest that modifications of forest canopy structures are capable of affecting mineral-soil horizon SMC structure via the throughfall mechanism when

  12. The Andean Geotrail (1): A scientific adventure

    Science.gov (United States)

    Sassier, C.; Galland, O.; Raufaste, C.; Mair, K.

    2009-12-01

    The role of Geosciences in our society is of primary importance. Its implications for humanity relate to major challenges such as climate change, managing energy resources, natural hazard mitigation, and water scarcity. Despite these issues being familiar to specialists, this is in general not the case for the public. In a world, where the impact of human activity is beginning to be seen on the environment, knowledge of the Earth and its history is paramount to make informed decisions that will influence our future. The necessity to educate the global population and raise awareness of Geosciences has led UNESCO to designate 2009 the International Year of the Planet Earth. In this context and with the label of the UNESCO, we organized and performed a popular science adventure that was followed in real time by both school children and many adults around the world. The Andean Geotrail consisted of a cycling expedition through a spectacular geological environment, the Andean Cordillera. During the nine month expedition, we cycled 8000 km and walked 400 km from Ushuaia in the Southern tip of Argentina to Nazca in Peru to encounter a rich variety of geological environments: active volcanoes, earthquakes, mineral and hydrocarbon deposits, and fantastic geological scenery. All this makes the Andes a great pedagogical natural laboratory. During the expedition, we visited spectacular geological localities that illustrate key Earth Science phenomena (such as mines and hydrocarbon deposits, erupting volcanoes and seismogenically active areas, and national parks) and discovered their implications for the local people. Along the way, we interviewed local geologists and scientists who helped us understand the geology of their areas. We gathered our own observations with those of the local specialists and published essays, articles and photographs on our website and blog (www.georouteandine.fr/English, http://georouteandine.blogspot.com). Seventeen schools in France and Norway

  13. Integración regional andina en salud Health in Andean regional integration

    Directory of Open Access Journals (Sweden)

    Carlos A. Agudelo

    2007-01-01

    Full Text Available A pesar su historia compartida, los países de la Región Andina presentan una diversidad social y política que genera realidades sanitarias heterogéneas y procesos de integración complejos. Se han dado por décadas procesos generales, como la Asociación Latinoamericana de Libre Comercio y la Asociación Latinoamericana de Integración, o de alcance regional como la Comunidad Andina de Naciones, la Comunidad del Caribe y el Mercado Común Centroamericano. En el campo específico de la salud se cuenta con un instrumento en la Región Andina, el Convenio Hipólito Unánue, creado en 1971. Estos procesos de integración se han concentrado en los aspectos económicos, con base en acuerdos de preferencias arancelarias, los cuales han generado, en el largo plazo, un intercambio comercial apreciable. En el campo de la salud se ha avanzado menos, en términos de procesos que ponen en común experiencias nacionales, conocimientos y capacidades. El análisis de las experiencias de integración en salud muestra que esta depende de las fortalezas de cada país y, en gran parte, de los procesos políticos nacionales.Despite their shared history, the Andean countries are socially and politically diverse, with heterogeneous health realities and complex integration processes. General developments such as the Latin American Free Trade Association and Latin American Integration Association have existed for decades, along with others of a regional scope, like the Andean Community of Nations, Caribbean Community, and Central American Common Market. The health field has a specific instrument in the Andean Region called the Hipólito Unánue Agreement, created in 1971. Integration processes have concentrated on economic aspects, based on preferential customs agreements that have led to an important long-term increase in trade. Less progress has been made in the field of health in terms of sharing national experiences, knowledge, and capabilities. Analysis of

  14. Modelling the canopy development of bambara groundnut

    DEFF Research Database (Denmark)

    Karunaratne, A.S.; Azam-Ali, S.N.; Al-Shareef, I.

    2010-01-01

    Canopy development of bambara groundnut (Vigna subterranea (L.) Verdc) is affected by temperature stress, drought stress and photoperiod. The quantification of these documented effects by means of a suitable crop model, BAMGRO is presented in this paper. Data on canopy development from five growth...... chamber, four glasshouse and three field experiments were analyzed to calibrate and validate the BAMGRO model to produce simulations for temperature stress, drought stress and photoperiodic effect on two contrasting landraces; Uniswa Red (Swaziland) and S19-3 (Namibia). The daily initiation rate of new...... leaves is calculated by means of a Gaussian function and is altered by temperature stress, drought stress, photoperiod and plant density. The rate in dead leaf number is dependent upon the maximum senescence fraction which can be explained by physiological maturity, mutual shading, temperature stress...

  15. Sunscreening fungal pigments influence the vertical gradient of pendulous lichens in boreal forest canopies.

    Science.gov (United States)

    Färber, Leonie; Sølhaug, Knut Asbjorn; Esseen, Per-Anders; Bilger, Wolfgang; Gauslaa, Yngvar

    2014-06-01

    Pendulous lichens dominate canopies of boreal forests, with dark Bryoria species in the upper canopy vs. light Alectoria and Usnea species in lower canopy. These genera offer important ecosystem services such as winter forage for reindeer and caribou. The mechanism behind this niche separation is poorly understood. We tested the hypothesis that species-specific sunscreening fungal pigments protect underlying symbiotic algae differently against high light, and thus shape the vertical canopy gradient of epiphytes. Three pale species with the reflecting pigment usnic acid (Alectoria sarmentosa, Usnea dasypoga, U. longissima) and three with dark, absorbing melanins (Bryoria capillaris, B. fremontii, B. fuscescens) were compared. We subjected the lichens to desiccation stress with and without light, and assessed their performance with chlorophyll fluorescence. Desiccation alone only affected U. longissima. By contrast, light in combination with desiccation caused photoinhibitory damage in all species. Usnic lichens were significantly more susceptible to light during desiccation than melanic ones. Thus, melanin is a more efficient light-screening pigment than usnic acid. Thereby, the vertical gradient of pendulous lichens in forest canopies is consistent with a shift in type and functioning of sunscreening pigments, from high-light-tolerant Bryoria in the upper to susceptible Alectoria and Usnea in the lower canopy.

  16. Assessment of Light Environment Variability in Broadleaved Forest Canopies Using Terrestrial Laser Scanning

    Directory of Open Access Journals (Sweden)

    Dimitry Van der Zande

    2010-06-01

    Full Text Available Light availability inside a forest canopy is of key importance to many ecosystem processes, such as photosynthesis and transpiration. Assessment of light availability and within-canopy light variability enables a more detailed understanding of these biophysical processes. The changing light-vegetation interaction in a homogeneous oak (Quercus robur L. stand was studied at different moments during the growth season using terrestrial laser scanning datasets and ray tracing technology. Three field campaigns were organized at regular time intervals (24 April 2008; 07 May 2008; 23 May 2008 to monitor the increase of foliage material. The laser scanning data was used to generate 3D representations of the forest stands, enabling structure feature extraction and light interception modeling, using the Voxel-Based Light Interception Model (VLIM. The VLIM is capable of estimating the relative light intensity or Percentage of Above Canopy Light (PACL at any arbitrary point in the modeled crown space. This resulted in a detailed description of the dynamic light environments inside the canopy. Mean vertical light extinction profiles were calculated for the three time frames, showing significant differences in light attenuation by the canopy between April 24 on the one hand, and May 7 and May 23 on the other hand. The proposed methodology created the opportunity to link these within-canopy light distributions to the increasing amount of photosynthetically active leaf material and its distribution in the considered 3D space.

  17. NDVI as a predictor of canopy arthropod biomass in the Alaskan arctic tundra.

    Science.gov (United States)

    Sweet, Shannan K; Asmus, Ashley; Rich, Matthew E; Wingfield, John; Gough, Laura; Boelman, Natalie T

    2015-04-01

    The physical and biological responses to rapid arctic warming are proving acute, and as such, there is a need to monitor, understand, and predict ecological responses over large spatial and temporal scales. The use of the normalized difference vegetation index (NDVI) acquired from airborne and satellite sensors addresses this need, as it is widely used as a tool for detecting and quantifying spatial and temporal dynamics of tundra vegetation cover, productivity, and phenology. Such extensive use of the NDVI to quantify vegetation characteristics suggests that it may be similarly applied to characterizing primary and secondary consumer communities. Here, we develop empirical models to predict canopy arthropod biomass with canopy-level measurements of the NDVI both across and within distinct tundra vegetation communities over four growing seasons in the Arctic Foothills region of the Brooks Range, Alaska, USA. When canopy arthropod biomass is predicted with the NDVI across all four growing seasons, our overall model that includes all four vegetation communities explains 63% of the variance in canopy arthropod biomass, whereas our models specific to each of the four vegetation communities explain 74% (moist tussock tundra), 82% (erect shrub tundra), 84% (riparian shrub tundra), and 87% (dwarf shrub tundra) of the observed variation in canopy arthropod biomass. Our field-based study suggests that measurements of the NDVI made from air- and spaceborne sensors may be able to quantify spatial and temporal variation in canopy arthropod biomass at landscape to regional scales.

  18. A new minute Andean Pristimantis (Anura: Strabomantidae from Venezuela

    Directory of Open Access Journals (Sweden)

    César L. Barrio-Amorós

    2012-12-01

    Full Text Available A new species of Pristimantis is described from the Venezuelan Andes. The new species is the smallest in its genus known in Venezuela and belongs to the Pristimantis unistrigatus Group. It differs from the rest of Venezuelan Andean congeners in body size (mean male SVL < 21.3 mm, female SVL < 26.3 mm, expanded discs on fingers and toes, absence of dorsolateral folds, and a distinctivecall consisting in 2–5 cricket-like short notes. The new species inhabits the southwestern part of the Cordillera de Mérida in Venezuela and the Venezuelan side of the Cordillera Oriental deColombia, and could be present on the Colombian portion of the cordillera as well.

  19. Third Radiation Transfer Model Intercomparison (RAMI) exercise : Documenting progress in canopy reflectance models

    NARCIS (Netherlands)

    Widlowski, J.-L.; Taberner, M.; Pinty, B.; Bruniquel-Pinel, V.; Disney, M.; Fernandes, R.; Gastellu-Etchegorry, J.P.; Gobron, N.; Kuusk, A.; Lavergne, T.; Leblanc, S.; Lewis, P.E.; Martin, E.; Mottus, M.; North, P.R.J.; Qin, W.; Robustelli, M.; Rochdi, N.; Ruiloba, R.; Soler, C.; Thompson, R.; Verhoef, W.; Xie, D.; Thompson, R.

    2007-01-01

    The Radiation Transfer Model Intercomparison (RAMI) initiative benchmarks canopy reflectance models under well‐controlled experimental conditions. Launched for the first time in 1999, this triennial community exercise encourages the systematic evaluation of canopy reflectance models on a voluntary

  20. Dry deposition and fate of radionuclides within spruce canopies

    International Nuclear Information System (INIS)

    Ould-Dada, Z.; Shaw, G.; Kinnersley, R.P.; Minski, M.J.

    1997-01-01

    The assessment of radiation dose to human populations from the release of radionuclides into the atmosphere following a nuclear accident relies on the use of simulation models. These need to be calibrated and tested using experimental data. In this study, the deposition and resuspension of radionuclides within a forest environment was investigated. Forests were identified in the aftermath of the Chernobyl accident as a specific type of semi-natural ecosystem for which radiological data were lacking within the countries of the European Union. Wind tunnel and field data have been collected for small model canopies of Norwegian spruce saplings using uranium and silica aerosol particles. These have provided quantitative estimates of the potential of a tree canopy to constitute an airborne inhalation hazard and a secondary source of airborne contamination after the initial deposition. Using these results, a multi-layer compartmental model of aerosol flux (CANDEP) has been developed and calibrated. It combines the processes of dry deposition, resuspension and field loss in individual layers of the model canopy. (5 figures; 4 tables; 15 references). (UK)

  1. SUNLIT AND SHADED MAIZE CANOPY WATER LOSS UNDER VARIED WATER STRESS

    Directory of Open Access Journals (Sweden)

    Antonio Odair Santos

    1999-12-01

    Full Text Available ABSTRACT The precise estimation of transpiration from plant canopies is important for the monitoring of crop water use and management of many agricultural operations related to water use planning. The aim of this study was to estimate transpiration from sunlit and shaded fractions of a maize ( Zea mays L. canopy, using the Penman-Monteith energy balance equation with modifications introduced by Fuchs et al. (1987 and Fuchs & Cohen (1989. Estimated values were validated by a heat pulse system, which was used to measure stem sap flow and by a weighing lysimeter. A relationship between incident radiation and leaf stomatal conductance for critical levels of leaf water potential was used to estimate transpiration. Results showed that computed transpiration of the shaded canopy ranged from 27 to 45% of the total transpiration when fluctuations in atmospheric demand and the level of water stress were taken in account. Hourly and daily estimates of transpiration showed agreement with lysimeter and heat pulse measurements on the well-watered plots. For the water-limited plots the precision of the estimate decreased due to difficulties in simulating the canopy stomatal conductance.

  2. Regeneration in canopy gaps of tierra-firme forest in the Peruvian Amazon

    DEFF Research Database (Denmark)

    Karsten, Rune Juelsborg; Jovanovic, Milos; Meilby, Henrik

    2013-01-01

    the regeneration dynamics of logging gaps with naturally occuring canopy gaps. In the concession of Consorcio Forestal Amazonico in the region of Ucayali in the Peruvian Amazon, a total of 210 circular sample plots were established in 35 gaps in unmanaged natural forest and 35 canopy gaps in forest managed...

  3. Evaluating Uncertainties in Sap Flux Scaled Estimates of Forest Transpiration, Canopy Conductance and Photosynthesis

    Science.gov (United States)

    Ward, E. J.; Bell, D. M.; Clark, J. S.; Kim, H.; Oren, R.

    2009-12-01

    Thermal dissipation probes (TDPs) are a common method for estimating forest transpiration and canopy conductance from sap flux rates in trees, but their implementation is plagued by uncertainties arising from missing data and variability in the diameter and canopy position of trees, as well as sapwood conductivity within individual trees. Uncertainties in estimates of canopy conductance also translate into uncertainties in carbon assimilation in models such as the Canopy Conductance Constrained Carbon Assimilation (4CA) model that combine physiological and environmental data to estimate photosynthetic rates. We developed a method to propagate these uncertainties in the scaling and imputation of TDP data to estimates of canopy transpiration and conductance using a state-space Jarvis-type conductance model in a hierarchical Bayesian framework. This presentation will focus on the impact of these uncertainties on estimates of water and carbon fluxes using 4CA and data from the Duke Free Air Carbon Enrichment (FACE) project, which incorporates both elevated carbon dioxide and soil nitrogen treatments. We will also address the response of canopy conductance to vapor pressure deficit, incident radiation and soil moisture, as well as the effect of treatment-related stand structure differences in scaling TDP measurements. Preliminary results indicate that in 2006, a year of normal precipitation (1127 mm), canopy transpiration increased in elevated carbon dioxide ~8% on a ground area basis. In 2007, a year with a pronounced drought (800 mm precipitation), this increase was only present in the combined carbon dioxide and fertilization treatment. The seasonal dynamics of water and carbon fluxes will be discussed in detail.

  4. Opening of the Gulf of Guayaquil: quantifying the motion from the trench to the Andean Cordillera

    Science.gov (United States)

    Santana, E.; Dumont, J. F.; Vilema, W.; Pedoja, K.

    2003-04-01

    The Gulf of Guayaquil is a complex pull-apart opened at the south tip of the North Andean Block. The Guayaquil-Caracas Megashear (i.e. Dolores-Guayaquil Megashear) which bounds the North Andean Block to the east crosses the Western Andean Cordillera along the Pallatanga fault, and joins southwestward the Ecuadorian trench. According to paleogeographic data the Gulf of Guayaquil began to open about 9 Ma ago, which is evidenced now by about 100 km offset of the Early Neogene Progresso and Loja basins. A lesser post orogenic offset of about 60 km is observed along the Pallatanga fault, coherent with the offset of the piedmont of the Western Andean Cordillera. The discrepancy suggests a partition of the deformation at the south tip of the North Andean Block, part of the motion being accommodated by other small faults north of the Pallatanga fault zone and resulting in a pull apart motion and subsidence of the Daule-Babahoyo basin. The main curve of the Tallara Arc described by the trend of the trench from north Peru to north Ecuador shows a significant anomaly in front of the Gulf of Guayaquil. A 60 to 70 km minimum right hand deviation of the curve is observed, displayed in three segments delimited by faults. Neotectonic studies in the Santa Clara and Puná Islands located in the Gulf of Guayaquil show a regional E-W shortening during the Pleistocene, characterised by right lateral motion along the Zambapala Cordillera in Puná. Offset of river drainage and morphostructures in South Puná gives evidence of 3 km dextral offset which post-date marine terraces with an estimated age of M.I.S. 9 or 11, giving mean offset rates of 9 mm/y or 6.8 mm/y respectively. The conclusion underlines the following points: (1) These data suggest that the offset rate inside the Gulf of Guayaquil during the Late Quaternary is lower than the mean rate observed since 9 Ma. The apparent slow down may be due to the partition of the deformation of the Gulf of Guayaquil towards the Guayas

  5. Holocene tephrostratigraphy of southern Chiloé Continental (Andean southern volcanic zone; ~43°S), Chile

    Science.gov (United States)

    Lachowycz, S.; Smith, V. C.; Pyle, D. M.; Mather, T. A.

    2012-12-01

    The eruptive history of the volcanoes in the southern part of the Andean Southern Volcanic Zone (42.5-45°S) is very poorly constrained: only several late Quaternary eruptions have been identified, mostly from study of sparse roadcuts [1]. In this study, we further constrain the Holocene explosive eruption history around 43°S by identifying and analysing tephra layers preserved in a ~3.25m long peat core from Cuesta Moraga [2], ~35km east of Yanteles volcano. Cryptotephra was extracted following the method of [3], in addition to macrotephra; owing to the vicinity of the sampling site to the tephra sources, cryptotephra was found throughout the core stratigraphy, but was sufficiently variable in concentration that discrete layers were identifiable and attributed to specific eruptions. Chemical analysis of the glass by electron microprobe shows that the tephra layers originate from a number of volcanoes in the region. This new tephrostratigraphy improves our knowledge of the important history of explosive volcanism in this area, potentially tying the tephrostratigraphies of surrounding areas (e.g., [4]) and allowing improved evaluation of regional volcanic risk. [1] Naranjo, J.A.., and C. R. Stern, 2004. Holocene tephrochronology of the southernmost part (42°30'-45°S) of the Andean Southern Volcanic Zone. Revista geológica de Chile, 31, pp. 225-240. [2] Heusser, C.J., et al., 1992. Paleoecology of late Quaterary deposits in Chiloé Continental, Chile. Revista Chilena de Historia Natural, 65, pp. 235-245. [3] Blockley, S.P.E., et al., 2005. A new and less destructive laboratory procedure for the physical separation of distal glass tephra shards from sediments. Quaternary Science Reviews, 24, pp. 1952-1960. [4] Watt, S.F.L., et al., 2011. Holocene tephrochronology of the Hualaihue region (Andean southern volcanic zone, ~42°S), southern Chile. Quaternary International, 246, pp. 324-343.

  6. A New Mechanism of Canopy Effect in Unsaturated Freezing Soils

    Directory of Open Access Journals (Sweden)

    Teng Jidong

    2016-01-01

    Full Text Available Canopy effect refers to the phenomenon where moisture accumulates underneath an impervious cover. Field observation reveals that canopy effect can take place in relatively dry soils where the groundwater table is deep and can lead to full saturation of the soil immediately underneath the impervious cover. On the other hand, numerical analysis based on existing theories of heat and mass transfer in unsaturated soils can only reproduce a minor amount of moisture accumulation due to an impervious cover, particularly when the groundwater table is relatively deep. In attempt to explain the observed canopy effect in field, this paper proposes a new mechanism of moisture accumulation in unsaturated freezing soils: vapour transfer in such a soil is accelerated by the process of vapour-ice desublimation. A new approach for modelling moisture and heat movements is proposed, in which the phase change of evaporation, condensation and de-sublimation of vapor flow are taken into account. The computed results show that the proposed model can indeed reproduce the unusual moisture accumulation observed in relatively dry soils. The results also demonstrate that soil freezing fed by vapour transfer can result in a water content close to full saturation. Since vapour transfer is seldom considered in geotechnical design, the canopy effect deserves more attention during construction and earth works in cold and arid regions.

  7. Sistema de gestión del área comercial del sector tecnológico. Caso de estudio empresa Andean-Trade S.A.

    OpenAIRE

    Calvopiña Limaico, Edwin Marcelo

    2016-01-01

    El presente estudio tiene el propósito de analizar el actual sistema de gestión comercial de la empresa Andean-Trade S.A., y determinar sus limitaciones y la forma en que puede ser mejorado, teniendo como meta un nuevo sistema de gestión para el área comercial, que se adapte fácilmente a los constantes cambios de los factores que influyen en el sector tecnológico. Andean-Trade S.A. Una empresa cuyo giro del negocio es la comercialización de productos y servicios tecnológicos, la iniciativa de...

  8. Remote sensing of canopy nitrogen at regional scale in Mediterranean forests using the spaceborne MERIS Terrestrial Chlorophyll Index

    Science.gov (United States)

    Loozen, Yasmina; Rebel, Karin T.; Karssenberg, Derek; Wassen, Martin J.; Sardans, Jordi; Peñuelas, Josep; De Jong, Steven M.

    2018-05-01

    Canopy nitrogen (N) concentration and content are linked to several vegetation processes. Therefore, canopy N concentration is a state variable in global vegetation models with coupled carbon (C) and N cycles. While there are ample C data available to constrain the models, widespread N data are lacking. Remotely sensed vegetation indices have been used to detect canopy N concentration and canopy N content at the local scale in grasslands and forests. Vegetation indices could be a valuable tool to detect canopy N concentration and canopy N content at larger scale. In this paper, we conducted a regional case-study analysis to investigate the relationship between the Medium Resolution Imaging Spectrometer (MERIS) Terrestrial Chlorophyll Index (MTCI) time series from European Space Agency (ESA) Envisat satellite at 1 km spatial resolution and both canopy N concentration (%N) and canopy N content (N g m-2, of ground area) from a Mediterranean forest inventory in the region of Catalonia, in the northeast of Spain. The relationships between the datasets were studied after resampling both datasets to lower spatial resolutions (20, 15, 10 and 5 km) and at the original spatial resolution of 1 km. The results at higher spatial resolution (1 km) yielded significant log-linear relationships between MTCI and both canopy N concentration and content: r2 = 0.32 and r2 = 0.17, respectively. We also investigated these relationships per plant functional type. While the relationship between MTCI and canopy N concentration was strongest for deciduous broadleaf and mixed plots (r2 = 0.24 and r2 = 0.44, respectively), the relationship between MTCI and canopy N content was strongest for evergreen needleleaf trees (r2 = 0.19). At the species level, canopy N concentration was strongly related to MTCI for European beech plots (r2 = 0.69). These results present a new perspective on the application of MTCI time series for canopy N detection.

  9. Effects of structural complexity on within-canopy light environments and leaf traits in a northern mixed deciduous forest.

    Science.gov (United States)

    Fotis, Alexander T; Curtis, Peter S

    2017-10-01

    Canopy structure influences forest productivity through its effects on the distribution of radiation and the light-induced changes in leaf physiological traits. Due to the difficulty of accessing and measuring forest canopies, few field-based studies have quantitatively linked these divergent scales of canopy functioning. The objective of our study was to investigate how canopy structure affects light profiles within a forest canopy and whether leaves of mature trees adjust morphologically and biochemically to the light environments characteristic of canopies with different structural complexity. We used a combination of light detection and ranging (LiDAR) data and hemispherical photographs to quantify canopy structure and light environments, respectively, and a telescoping pole to sample leaves. Leaf mass per area (LMA), nitrogen on an area basis (Narea) and chlorophyll on a mass basis (Chlmass) were measured in red maple (Acer rubrum), american beech (Fagus grandifolia), white pine (Pinus strobus), and northern red oak (Quercus rubra) at different heights in plots with similar leaf area index but contrasting canopy complexity (rugosity). We found that more complex canopies had greater porosity and reduced light variability in the midcanopy while total light interception was unchanged relative to less complex canopies. Leaf phenotypes of F. grandifolia, Q. rubra and P. strobus were more sun-acclimated in the midstory of structurally complex canopies while leaf phenotypes of A. rubrum were more shade-acclimated (lower LMA) in the upper canopy of more complex stands, despite no differences in total light interception. Broadleaf species showed further differences in acclimation with increased Narea and reduced Chlmass in leaves with higher LMA, while P. strobus showed no change in Narea and Chlmass with higher LMA. Our results provide new insight on how light distribution and leaf acclimation in mature trees might be altered when natural and anthropogenic

  10. Solar UVR-induced DNA damage and inhibition of photosynthesis in phytoplankton from Andean lakes of Argentina

    NARCIS (Netherlands)

    Villafane, VE; Buma, AGJ; Boelen, P; Helbling, EW

    2004-01-01

    During January 1999, studies were carried out in temperate lakes of the Andean region of Argentina (41degreesS, 71degreesW) to determine the short-term effects of solar ultraviolet radiation (UVR, 280-400 nm) upon natural phytoplankton assemblages. Organisms from one 'clear' (Lake Moreno) and two

  11. Landscape-scale drivers of glacial ecosystem change in the montane forests of the eastern Andean flank, Ecuador

    NARCIS (Netherlands)

    Loughlin, N.J.D.; Gosling, W.D.; Coe, A.L.; Gulliver, P.; Mothes, P.; Montoya, E.

    2018-01-01

    Understanding the impact of landscape-scale disturbance events during the last glacial period is vital in accurately reconstructing the ecosystem dynamics of montane environments. Here, a sedimentary succession from the tropical montane cloud forest of the eastern Andean flank of Ecuador provides

  12. Testing the Suitability of a Terrestrial 2D LiDAR Scanner for Canopy Characterization of Greenhouse Tomato Crops

    Directory of Open Access Journals (Sweden)

    Jordi Llop

    2016-09-01

    Full Text Available Canopy characterization is essential for pesticide dosage adjustment according to vegetation volume and density. It is especially important for fresh exportable vegetables like greenhouse tomatoes. These plants are thin and tall and are planted in pairs, which makes their characterization with electronic methods difficult. Therefore, the accuracy of the terrestrial 2D LiDAR sensor is evaluated for determining canopy parameters related to volume and density and established useful correlations between manual and electronic parameters for leaf area estimation. Experiments were performed in three commercial tomato greenhouses with a paired plantation system. In the electronic characterization, a LiDAR sensor scanned the plant pairs from both sides. The canopy height, canopy width, canopy volume, and leaf area were obtained. From these, other important parameters were calculated, like the tree row volume, leaf wall area, leaf area index, and leaf area density. Manual measurements were found to overestimate the parameters compared with the LiDAR sensor. The canopy volume estimated with the scanner was found to be reliable for estimating the canopy height, volume, and density. Moreover, the LiDAR scanner could assess the high variability in canopy density along rows and hence is an important tool for generating canopy maps.

  13. Soil types and forest canopy structures in southern Missouri: A first look with AIS data

    Science.gov (United States)

    Green, G. M.; Arvidson, R. E.

    1986-01-01

    Spectral reflectance properties of deciduous oak-hickory forests covering the eastern half of the Rolla Quadrangle were examined using Thematic Mapper (TM) data acquired in August and December, 1982 and Airborne Imaging Spectrometer (AIS) data acquired in August, 1985. For the TM data distinctly high relative reflectance values (greater than 0.3) in the near infrared (Band 4, 0.73 to 0.94 micrometers) correspond to regions characterized by xeric (dry) forests that overlie soils with low water retention capacities. These soils are derived primarily from rhyolites. More mesic forests characterized by lower TM band 4 relative reflectances are associated with soils of higher retention capacities derived predominately from non-cherty carbonates. The major factors affecting canopy reflectance appear to be the leaf area index (LAI) and leaf optical properties. The Suits canopy reflectance model predicts the relative reflectance values for the xeric canopies. The mesic canopy reflectance is less well matched and incorporation of canopy shadowing caused by the irregular nature of the mesic canopy may be necessary. Preliminary examination of high spectral resolution AIS data acquired in August of 1985 reveals no more information than found in the broad band TM data.

  14. Two new trans-Andean species of Imparfinis Eigenmann & Norris, 1900 (Siluriformes: Heptapteridae from Colombia

    Directory of Open Access Journals (Sweden)

    Armando Ortega-Lara

    Full Text Available Two new species of Imparfinis are described from the trans-Andean region of Colombia. Imparfinis timana is diagnosed by having longer anal fin base (12.4-15.5% in SL, in combination with long adipose fin (24.6-31.3% in SL, 5-6 gill rakers on the first ceratobranchial, 42-43 vertebrae and additional measurements. Imparfinis usmai is distinguished by the combination of first ray of dorsal fin longest, but not projected as a long filament, long adipose fin (21.1-27.0% in SL, maxillary barbel exceeding pelvic-fin base, 39-40 vertebrae, upper caudal-fin lobe pointed and longer than lower lobe, lower lobe rounded, 7-8 gill rakers on the first ceratobranchial, as well as additional measurements. Imparfinis timana is only known from río Guarapas, a small tributary of the upper course of the río Magdalena. Imparfinis usmai is broadly distributed in the upper basin of ríos Cauca and Magdalena, and in the lower Patía river basin. The restricted distribution of I. nemacheir to trans-Andean drainages (Atrato, Magdalena, and Lago de Maracaibo is also discussed.

  15. Mapping forest canopy fuels in Yellowstone National Park using lidar and hyperspectral data

    Science.gov (United States)

    Halligan, Kerry Quinn

    The severity and size of wildland fires in the forested western U.S have increased in recent years despite improvements in fire suppression efficiency. This, along with increased density of homes in the wildland-urban interface, has resulted in high costs for fire management and increased risks to human health, safety and property. Crown fires, in comparison to surface fires, pose an especially high risk due to their intensity and high rate of spread. Crown fire models require a range of quantitative fuel parameters which can be difficult and costly to obtain, but advances in lidar and hyperspectral sensor technologies hold promise for delivering these inputs. Further research is needed, however, to assess the strengths and limitations of these technologies and the most appropriate analysis methodologies for estimating crown fuel parameters from these data. This dissertation focuses on retrieving critical crown fuel parameters, including canopy height, canopy bulk density and proportion of dead canopy fuel, from airborne lidar and hyperspectral data. Remote sensing data were used in conjunction with detailed field data on forest parameters and surface reflectance measurements. A new method was developed for retrieving Digital Surface Model (DSM) and Digital Canopy Models (DCM) from first return lidar data. Validation data on individual tree heights demonstrated the high accuracy (r2 0.95) of the DCMs developed via this new algorithm. Lidar-derived DCMs were used to estimate critical crown fire parameters including available canopy fuel, canopy height and canopy bulk density with linear regression model r2 values ranging from 0.75 to 0.85. Hyperspectral data were used in conjunction with Spectral Mixture Analysis (SMA) to assess fuel quality in the form of live versus dead canopy proportions. Severity and stage of insect-caused forest mortality were estimated using the fractional abundance of green vegetation, non-photosynthetic vegetation and shade obtained from

  16. Water Level Controls on Sap Flux of Canopy Species in Black Ash Wetlands

    Science.gov (United States)

    Joseph Shannon; Matthew Van Grinsven; Joshua Davis; Nicholas Bolton; Nam Noh; Thomas Pypker; Randall Kolka

    2018-01-01

    Black ash (Fraxinus nigra Marsh.) exhibits canopy dominance in regularly inundated wetlands, suggesting advantageous adaptation. Black ash mortality due to emerald ash borer (Agrilus planipennis Fairmaire) will alter canopy composition and site hydrology. Retention of these forested wetlands requires understanding black ash...

  17. Heavy particle transport in a trellised agricultural canopy during non-row-aligned winds

    Science.gov (United States)

    Agricultural systems are exposed to and influenced by particles of many types (e.g., pathogens, pollen, pests), the concentrations of which are typically highest in the regions immediately surrounding their sources. The intermittent nature of trellised canopies creates an unique canopy architecture ...

  18. Thoracic skeletal morphology and high-altitude hypoxia in Andean prehistory.

    Science.gov (United States)

    Weinstein, Karen J

    2007-09-01

    Living humans from the highland Andes exhibit antero-posteriorly and medio-laterally enlarged chests in response to high-altitude hypoxia. This study hypothesizes that morphological responses to high-altitude hypoxia should also be evident in pre-Contact Andean groups. Thoracic skeletal morphology in four groups of human skeletons (N = 347) are compared: two groups from coastal regions (Ancón, Peru, n = 79 and Arica, Chile, n = 123) and two groups from high altitudes (San Pedro de Atacama, Chile, n = 102 and Machu Picchu and Cuzco, Peru, n = 43). Osteometric variables that represent proportions of chest width and depth include sternal and clavicular lengths and breadths and rib length, curvature, and area. Each variable was measured relative to body size, transformed into logarithmic indices, and compared across sex-specific groups using ANOVA and Tukey multiple comparison tests. Atacama highlanders have the largest sternal and clavicular proportions and ribs with the greatest area and least amount of curvature, features that suggest an antero-posteriorly deep and mediolaterally wide thoracic skeleton. Ancón lowlanders exhibit proportions indicating narrower and shallower chests. Machu Picchu and Cuzco males cluster with the other highland group in rib curvature and area at the superior levels of the thorax, whereas chest proportions in Machu Picchu and Cuzco females resemble those of lowlanders. The variation in Machu Picchu and Cuzco males and females is interpreted as the result of population migrations. The presence of morphological traits indicative of enlarged chests in some highland individuals suggests that high-altitude hypoxia was an environmental stressor shaping the biology of highland Andean groups during the pre-Contact period. (c) 2007 Wiley-Liss, Inc.

  19. Genetic diversity of Phytophthora infestans in the Northern Andean region.

    Science.gov (United States)

    Cárdenas, Martha; Grajales, Alejandro; Sierra, Roberto; Rojas, Alejandro; González-Almario, Adriana; Vargas, Angela; Marín, Mauricio; Fermín, Gustavo; Lagos, Luz E; Grünwald, Niklaus J; Bernal, Adriana; Salazar, Camilo; Restrepo, Silvia

    2011-02-09

    Phytophthora infestans (Mont.) de Bary, the causal agent of potato late blight, is responsible for tremendous crop losses worldwide. Countries in the northern part of the Andes dedicate a large proportion of the highlands to the production of potato, and more recently, solanaceous fruits such as cape gooseberry (Physalis peruviana) and tree tomato (Solanum betaceum), all of which are hosts of this oomycete. In the Andean region, P. infestans populations have been well characterized in Ecuador and Peru, but are poorly understood in Colombia and Venezuela. To understand the P. infestans population structure in the Northern part of the Andes, four nuclear regions (ITS, Ras, β-tubulin and Avr3a) and one mitochondrial (Cox1) region were analyzed in isolates of P. infestans sampled from different hosts in Colombia and Venezuela. Low genetic diversity was found within this sample of P. infestans isolates from crops within several regions of Colombia and Venezuela, revealing the presence of clonal populations of the pathogen in this region. We detected low frequency heterozygotes, and their distribution patterns might be a consequence of a high migration rate among populations with poor effective gene flow. Consistent genetic differentiation exists among isolates from different regions. The results here suggest that in the Northern Andean region P. infestans is a clonal population with some within-clone variation. P. infestans populations in Venezuela reflect historic isolation that is being reinforced by a recent self-sufficiency of potato seeds. In summary, the P. infestans population is mainly shaped by migration and probably by the appearance of variants of key effectors such as Avr3a.

  20. Genetic diversity of Phytophthora infestans in the Northern Andean region

    Directory of Open Access Journals (Sweden)

    Grünwald Niklaus J

    2011-02-01

    Full Text Available Abstract Background Phytophthora infestans (Mont. de Bary, the causal agent of potato late blight, is responsible for tremendous crop losses worldwide. Countries in the northern part of the Andes dedicate a large proportion of the highlands to the production of potato, and more recently, solanaceous fruits such as cape gooseberry (Physalis peruviana and tree tomato (Solanum betaceum, all of which are hosts of this oomycete. In the Andean region, P. infestans populations have been well characterized in Ecuador and Peru, but are poorly understood in Colombia and Venezuela. To understand the P. infestans population structure in the Northern part of the Andes, four nuclear regions (ITS, Ras, β-tubulin and Avr3a and one mitochondrial (Cox1 region were analyzed in isolates of P. infestans sampled from different hosts in Colombia and Venezuela. Results Low genetic diversity was found within this sample of P. infestans isolates from crops within several regions of Colombia and Venezuela, revealing the presence of clonal populations of the pathogen in this region. We detected low frequency heterozygotes, and their distribution patterns might be a consequence of a high migration rate among populations with poor effective gene flow. Consistent genetic differentiation exists among isolates from different regions. Conclusions The results here suggest that in the Northern Andean region P. infestans is a clonal population with some within-clone variation. P. infestans populations in Venezuela reflect historic isolation that is being reinforced by a recent self-sufficiency of potato seeds. In summary, the P. infestans population is mainly shaped by migration and probably by the appearance of variants of key effectors such as Avr3a.

  1. Radiative transfer within seagrass canopies: impact on carbon budgets and light requirements

    Science.gov (United States)

    Zimmerman, Richard C.; Mobley, Curtis D.

    1997-02-01

    Seagrasses are ecologically important but extremely vulnerable to anthropogenic modifications of the coastal zone that affect light availability within these unique ecosystems. Strongly pigmented seagrass leaves can extend for more than 1 m above the substrate and biomass is distributed unevenly throughout the canopy. in this study, light attenuation in a 7 m water column that contained a seagrass canopy extending 1.5 m above the bottom was calculated by the radiative transfer model Hydrolight using the spectral absorbance of eelgrass leaves and a non-uniform vertical distribution of biomass. Runs were performed in clear and turbid water columns, over san d and mud substrates, and with shoot densities ranging from 25 to 200 m-2 using solar angles for both winter and summer solstices. The flux of photosynthetically active irradiance (EPAR) reaching the top of the seagrass canopy was twice as high in summer compared to winter, and in clear water compared to turbid water. Sediment type had a measurable effect on EPAR only within the bottom third of the canopy. Light penetration within the canopy was inversely proportional to shoot density. Introduction of daylength and a sinusoidal distribution of EPAR throughout the day greatly increased the importance of solar elevation on daily integrated production relative to water column turbidity and sediment type. Shoot-specific productivity decreased and the position of maximum shoot productivity within the canopy shallowed as shoot density increased. Positive net photosynthesis for entire shoots was possible only when plant density was lower than 100 shoots m-2 in winter; values consistent with field observations. Although very simplistic with regard to inherent optical properties of real seagrass leaves, this model was able to generate estimates of maximum sustainable shoot density that were fully testable by, and wholly consistent with, field observations.

  2. ForestCrowns: a transparency estimation tool for digital photographs of forest canopies

    Science.gov (United States)

    Matthew Winn; Jeff Palmer; S.-M. Lee; Philip Araman

    2016-01-01

    ForestCrowns is a Windows®-based computer program that calculates forest canopy transparency (light transmittance) using ground-based digital photographs taken with standard or hemispherical camera lenses. The software can be used by forest managers and researchers to monitor growth/decline of forest canopies; provide input for leaf area index estimation; measure light...

  3. Vines and canopy contact: a route for snake predation on parrot nests.

    Science.gov (United States)

    SUSAN E. KOENIG; JOSEPH M. WUNDERLE; ERNESTO C. ENKERLINHOEFLICH

    2007-01-01

    Ornithologists have hypothesized that some tropical forest birds avoid snake predation by nesting in isolated trees that do not have vines and canopy contact with neighbouring trees. Here we review two complementary studies that support this hypothesis by demonstrating (1) that an abundance of vines and an interlocking canopy characterized Jamaican Black-billed Parrot...

  4. Effects of Kaolin Application on Light Absorption and Distribution, Radiation Use Efficiency and Photosynthesis of Almond and Walnut Canopies

    Science.gov (United States)

    Rosati, Adolfo; Metcalf, Samuel G.; Buchner, Richard P.; Fulton, Allan E.; Lampinen, Bruce D.

    2007-01-01

    Background and Aims Kaolin applied as a suspension to plant canopies forms a film on leaves that increases reflection and reduces absorption of light. Photosynthesis of individual leaves is decreased while the photosynthesis of the whole canopy remains unaffected or even increases. This may result from a better distribution of light within the canopy following kaolin application, but this explanation has not been tested. The objective of this work was to study the effects of kaolin application on light distribution and absorption within tree canopies and, ultimately, on canopy photosynthesis and radiation use efficiency. Methods Photosynthetically active radiation (PAR) incident on individual leaves within the canopy of almond (Prunus dulcis) and walnut (Juglans regia) trees was measured before and after kaolin application in order to study PAR distribution within the canopy. The PAR incident on, and reflected and transmitted by, the canopy was measured on the same day for kaolin-sprayed and control trees in order to calculate canopy PAR absorption. These data were then used to model canopy photosynthesis and radiation use efficiency by a simple method proposed in previous work, based on the photosynthetic response to incident PAR of a top-canopy leaf. Key Results Kaolin increased incident PAR on surfaces of inner-canopy leaves, although there was an estimated 20 % loss in PAR reaching the photosynthetic apparatus, due to increased reflection. Assuming a 20 % loss of PAR, modelled photosynthesis and photosynthetic radiation use efficiency (PRUE) of kaolin-coated leaves decreased by only 6·3 %. This was due to (1) more beneficial PAR distribution within the kaolin-sprayed canopy, and (2) with decreasing PAR, leaf photosynthesis decreases less than proportionally, due to the curvature of the photosynthesis response-curve to PAR. The relatively small loss in canopy PRUE (per unit of incident PAR), coupled with the increased incident PAR on the leaf surface on

  5. Automated lidar-derived canopy height estimates for the Upper Mississippi River System

    Science.gov (United States)

    Hlavacek, Enrika

    2015-01-01

    Land cover/land use (LCU) classifications serve as important decision support products for researchers and land managers. The LCU classifications produced by the U.S. Geological Survey’s Upper Midwest Environmental Sciences Center (UMESC) include canopy height estimates that are assigned through manual aerial photography interpretation techniques. In an effort to improve upon these techniques, this project investigated the use of high-density lidar data for the Upper Mississippi River System to determine canopy height. An ArcGIS tool was developed to automatically derive height modifier information based on the extent of land cover features for forest classes. The measurement of canopy height included a calculation of the average height from lidar point cloud data as well as the inclusion of a local maximum filter to identify individual tree canopies. Results were compared to original manually interpreted height modifiers and to field survey data from U.S. Forest Service Forest Inventory and Analysis plots. This project demonstrated the effectiveness of utilizing lidar data to more efficiently assign height modifier attributes to LCU classifications produced by the UMESC.

  6. Carbon storage and long-term rate of accumulation in high-altitude Andean peatlands of Bolivia

    Science.gov (United States)

    J.A. Hribljan; D.J. Cooper; J. Sueltenfuss; E.C. Wolf; K.A. Heckman; Erik Lilleskov; R.A. Chimner

    2015-01-01

    The high-altitude (4,500+ m) Andean mountain range of north-western Bolivia contains many peatlands. Despite heavy grazing pressure and potential damage from climate change, little is known about these peatlands. Our objective was to quantify carbon pools, basal ages and long-term peat accumulation rates in peatlands in two areas of the arid puna ecoregion of Bolivia:...

  7. Towards a High Temporal Frequency Grass Canopy Thermal IR Model for Background Signatures

    Science.gov (United States)

    Ballard, Jerrell R., Jr.; Smith, James A.; Koenig, George G.

    2004-01-01

    In this paper, we present our first results towards understanding high temporal frequency thermal infrared response from a dense plant canopy and compare the application of our model, driven both by slowly varying, time-averaged meteorological conditions and by high frequency measurements of local and within canopy profiles of relative humidity and wind speed, to high frequency thermal infrared observations. Previously, we have employed three-dimensional ray tracing to compute the intercepted and scattered radiation fluxes and for final scene rendering. For the turbulent fluxes, we employed simple resistance models for latent and sensible heat with one-dimensional profiles of relative humidity and wind speed. Our modeling approach has proven successful in capturing the directional and diurnal variation in background thermal infrared signatures. We hypothesize that at these scales, where the model is typically driven by time-averaged, local meteorological conditions, the primary source of thermal variance arises from the spatial distribution of sunlit and shaded foliage elements within the canopy and the associated radiative interactions. In recent experiments, we have begun to focus on the high temporal frequency response of plant canopies in the thermal infrared at 1 second to 5 minute intervals. At these scales, we hypothesize turbulent mixing plays a more dominant role. Our results indicate that in the high frequency domain, the vertical profile of temperature change is tightly coupled to the within canopy wind speed In the results reported here, the canopy cools from the top down with increased wind velocities and heats from the bottom up at low wind velocities. .

  8. Canopy rainfall partitioning across an urbanization gradient in forest structure as characterized by terrestrial LiDAR

    Science.gov (United States)

    Mesta, D. C.; Van Stan, J. T., II; Yankine, S. A.; Cote, J. F.; Jarvis, M. T.; Hildebrandt, A.; Friesen, J.; Maldonado, G.

    2017-12-01

    As urbanization expands, greater forest area is shifting from natural stand structures to urban stand structures, like forest fragments and landscaped tree rows. Changes in forest canopy structure have been found to drastically alter the amount of rainwater reaching the surface. However, stormwater management models generally treat all forest structures (beyond needle versus broadleaved) similarly. This study examines the rainfall partitioning of Pinus spp. canopies along a natural-to-urban forest gradient and compares these to canopy structural measurements using terrestrial LiDAR. Throughfall and meteorological observations were also used to estimate parameters of the commonly-used Gash interception model. Preliminary findings indicate that as forest structure changed from natural, closed canopy conditions to semi-closed canopy fragments and, ultimately, to exposed urban landscaping tree rows, the interchange between throughfall and rainfall interception also changed. This shift in partitioning between throughfall and rainfall interception may be linked to intuitive parameters, like canopy closure and density, as well as more complex metrics, like the fine-scale patterning of gaps (ie, lacunarity). Thus, results indicate that not all forests of the same species should be treated the same by stormwater models. Rather, their canopy structural characteristics should be used to vary their hydrometeorological interactions.

  9. Chlorophyll fluorescence tracks seasonal variations of photosynthesis from leaf to canopy in a temperate forest.

    Science.gov (United States)

    Yang, Hualei; Yang, Xi; Zhang, Yongguang; Heskel, Mary A; Lu, Xiaoliang; Munger, J William; Sun, Shucun; Tang, Jianwu

    2017-07-01

    Accurate estimation of terrestrial gross primary productivity (GPP) remains a challenge despite its importance in the global carbon cycle. Chlorophyll fluorescence (ChlF) has been recently adopted to understand photosynthesis and its response to the environment, particularly with remote sensing data. However, it remains unclear how ChlF and photosynthesis are linked at different spatial scales across the growing season. We examined seasonal relationships between ChlF and photosynthesis at the leaf, canopy, and ecosystem scales and explored how leaf-level ChlF was linked with canopy-scale solar-induced chlorophyll fluorescence (SIF) in a temperate deciduous forest at Harvard Forest, Massachusetts, USA. Our results show that ChlF captured the seasonal variations of photosynthesis with significant linear relationships between ChlF and photosynthesis across the growing season over different spatial scales (R 2  = 0.73, 0.77, and 0.86 at leaf, canopy, and satellite scales, respectively; P chlorophyll content (R 2  = 0.65 for canopy GPP SIF and chlorophyll content; P < 0.0001), leaf area index (LAI) (R 2  = 0.35 for canopy GPP SIF and LAI; P < 0.0001), and normalized difference vegetation index (NDVI) (R 2  = 0.36 for canopy GPP SIF and NDVI; P < 0.0001). Our results suggest that ChlF can be a powerful tool to track photosynthetic rates at leaf, canopy, and ecosystem scales. © 2016 John Wiley & Sons Ltd.

  10. Modeling cotton (Gossypium spp) leaves and canopy using computer aided geometric design (CAGD)

    Science.gov (United States)

    The goal of this research is to develop a geometrically accurate model of cotton crop canopies for exploring changes in canopy microenvironment and physiological function with leaf structure. We develop an accurate representation of the leaves, including changes in three-dimensional folding and orie...

  11. Automated detection of branch dimensions in woody skeletons of leafless fruit tree canopies

    NARCIS (Netherlands)

    Bucksch, A.; Fleck, S.

    2009-01-01

    Light driven physiological processes of tree canopies need to be modelled based on detailed 3Dcanopy structure – we explore the possibilities offered by terrestrial LIDAR to automatically represent woody skeletons of leafless trees as a basis for adequate models of canopy structure. The automatic

  12. Relationships between soil-based management zones and canopy sensing for corn nitrogen management

    Science.gov (United States)

    Integrating soil-based management zones (MZ) with crop-based active canopy sensors to direct spatially variable nitrogen (N) applications has been proposed for improving N fertilizer management of corn (Zea mays L.). Analyses are needed to evaluate relationships between canopy sensing and soil-based...

  13. Forest biomass, canopy structure, and species composition relationships with multipolarization L-band synthetic aperture radar data

    Science.gov (United States)

    Sader, Steven A.

    1987-01-01

    The effect of forest biomass, canopy structure, and species composition on L-band synthetic aperature radar data at 44 southern Mississippi bottomland hardwood and pine-hardwood forest sites was investigated. Cross-polarization mean digital values for pine forests were significantly correlated with green weight biomass and stand structure. Multiple linear regression with five forest structure variables provided a better integrated measure of canopy roughness and produced highly significant correlation coefficients for hardwood forests using HV/VV ratio only. Differences in biomass levels and canopy structure, including branching patterns and vertical canopy stratification, were important sources of volume scatter affecting multipolarization radar data. Standardized correction techniques and calibration of aircraft data, in addition to development of canopy models, are recommended for future investigations of forest biomass and structure using synthetic aperture radar.

  14. The fauna and flora of a kelp bed canopy | Allen | African Zoology

    African Journals Online (AJOL)

    The fauna and flora of the canopy of a kelp bed off Oudekraal, on the Cape Peninsula, Is surveyed. Four species of epiphytic algae occur In the kelp canopy, three restricted to Ecklonia maxima and the fourth to Laminaria pallida. Epiphyte biomass is equivalent to 4-9% of host standing crop amongst E. maxima, but less than ...

  15. Can Canopy Uptake Influence Nitrogen Acquisition and Allocation by Trees?

    Science.gov (United States)

    Nair, Richard; Perks, Mike; Mencuccini, Maurizio

    2015-04-01

    Nitrogen (N) fertilization due to atmospheric deposition of anthropogenic nitrogen (NDEP) may explain some of the net carbon (C) sink (0.6-0.7 Pg y-1) in temperate forests, but estimates of the additional C uptake due to atmospheric N additions (ΔCΔN) can vary by over an order of magnitude (~ 5 to 200 ΔCΔN). High estimates from several recent studies [e.g. Magnani (2007), Nature 447 848-850], deriving ΔCΔN from regional correlations between NDEP and measures of C uptake (such as eddy covariance -derived net ecosystem production, or forest inventory data) contradict estimates from other studies of 15N tracer applications added as fertilizer to the forest floor. A strong ΔCΔN effect requires nitrogen to be efficiently acquired by trees and allocated to high C:N, long-lived woody tissues, but these isotope experiments typically report relatively little (~ 20 %) of 15N added is found above-ground, with estimates are often attributed to co-variation with other factors across the range of sites investigated. However 15N-fertilization treatments often impose considerably higher total N loads than ambient NDEP and almost exclusively only apply mineral 15N treatments to the soil, often in a limited number of treatment events over relatively short periods of time. Excessive N deposition loads can induce negative physiological effects and limit the resulting ΔCΔN observed, and applying treatments to the soil may ignore the importance of canopy nitrogen uptake in overall forest nutrition. As canopies can directly take up nitrogen, the chronic, (relatively) low levels of ambient NDEP inputs from pollution may be acquired without some of the effects of heavy N loads, obtaining this N before it reaches the soil, and allowing canopies to substitute for, or supplement, edaphic N nutrition. The strength of this effect depends on how much N uptake can occur across the canopy under field conditions, and if this extra N supplies growth in woody tissues such as the stem, as

  16. Legacy effects of wildfire on stream thermal regimes and rainbow trout ecology: an integrated analysis of observation and individual-based models

    Science.gov (United States)

    Rosenberger, Amanda E.; Dunham, Jason B.; Neuswanger, Jason R.; Railsback, Steven F.

    2015-01-01

    Management of aquatic resources in fire-prone areas requires understanding of fish species’ responses to wildfire and of the intermediate- and long-term consequences of these disturbances. We examined Rainbow Trout populations in 9 headwater streams 10 y after a major wildfire: 3 with no history of severe wildfire in the watershed (unburned), 3 in severely burned watersheds (burned), and 3 in severely burned watersheds subjected to immediate events that scoured the stream channel and eliminated streamside vegetation (burned and reorganized). Results of a previous study of this system suggested the primary lasting effects of this wildfire history on headwater stream habitat were differences in canopy cover and solar radiation, which led to higher summer stream temperatures. Nevertheless, trout were present throughout streams in burned watersheds. Older age classes were least abundant in streams draining watersheds with a burned and reorganized history, and individuals >1 y old were most abundant in streams draining watersheds with an unburned history. Burned history corresponded with fast growth, low lipid content, and early maturity of Rainbow Trout. We used an individual-based model of Rainbow Trout growth and demographic patterns to determine if temperature interactions with bioenergetics and competition among individuals could lead to observed phenotypic and ecological differences among populations in the absence of other plausible mechanisms. Modeling suggested that moderate warming associated with wildfire and channel disturbance history leads to faster individual growth, which exacerbates competition for limited food, leading to decreases in population densities. The inferred mechanisms from this modeling exercise suggest the transferability of ecological patterns to a variety of temperature-warming scenarios.

  17. A state-space modeling approach to estimating canopy conductance and associated uncertainties from sap flux density data.

    Science.gov (United States)

    Bell, David M; Ward, Eric J; Oishi, A Christopher; Oren, Ram; Flikkema, Paul G; Clark, James S

    2015-07-01

    Uncertainties in ecophysiological responses to environment, such as the impact of atmospheric and soil moisture conditions on plant water regulation, limit our ability to estimate key inputs for ecosystem models. Advanced statistical frameworks provide coherent methodologies for relating observed data, such as stem sap flux density, to unobserved processes, such as canopy conductance and transpiration. To address this need, we developed a hierarchical Bayesian State-Space Canopy Conductance (StaCC) model linking canopy conductance and transpiration to tree sap flux density from a 4-year experiment in the North Carolina Piedmont, USA. Our model builds on existing ecophysiological knowledge, but explicitly incorporates uncertainty in canopy conductance, internal tree hydraulics and observation error to improve estimation of canopy conductance responses to atmospheric drought (i.e., vapor pressure deficit), soil drought (i.e., soil moisture) and above canopy light. Our statistical framework not only predicted sap flux observations well, but it also allowed us to simultaneously gap-fill missing data as we made inference on canopy processes, marking a substantial advance over traditional methods. The predicted and observed sap flux data were highly correlated (mean sensor-level Pearson correlation coefficient = 0.88). Variations in canopy conductance and transpiration associated with environmental variation across days to years were many times greater than the variation associated with model uncertainties. Because some variables, such as vapor pressure deficit and soil moisture, were correlated at the scale of days to weeks, canopy conductance responses to individual environmental variables were difficult to interpret in isolation. Still, our results highlight the importance of accounting for uncertainty in models of ecophysiological and ecosystem function where the process of interest, canopy conductance in this case, is not observed directly. The StaCC modeling

  18. Effect of smoke on subcanopy shaded light, canopy temperature, and carbon dioxide uptake in an Amazon rainforest

    OpenAIRE

    Doughty, C. E.; Flanner, M. G.; Goulden, M. L.

    2010-01-01

    Daytime Net Ecosystem CO2 uptake (NEE) in an Amazon forest has been shown to increase significantly during smoky periods associated with biomass burning. We investigated whether the increase in CO2 uptake is caused by increased irradiance in the lower canopy, which results from increased above-canopy diffuse light, or by decreased canopy temperature, which results from decreased above-canopy net radiation. We used Sun photometers measuring aerosol optical depth to find nonsmoky (Aerosol Optic...

  19. Phenotypic, Molecular, and Pathological Characterization of Colletotrichum acutatum Associated with Andean Lupine and Tamarillo in the Ecuadorian Andes

    NARCIS (Netherlands)

    Falconi, C.; Visser, R.G.F.; Heusden, van A.W.

    2013-01-01

    Anthracnose is a serious problem of both Andean lupine and tamarillo in Ecuador. Morphological features, internal transcribed spacer (ITS) sequences, and host specificity were used to characterize Colletotrichum isolates from lupine and tamarillo. Based on phenotypic and molecular characterization,

  20. Seasonal variability of interception evaporation from the canopy of a mixed deciduous forest

    DEFF Research Database (Denmark)

    Herbst, Mathias; Rosier, Paul T.W.; McNeil, David D.

    2008-01-01

    and the different aerodynamic properties of the canopy. Together with the lower average rainfall rate this counterbalanced the reduced storage capacity of the leafless canopy and maintained a relatively high interception loss throughout the year being 29% of the gross rainfall in the leafed period and 20...

  1. Integrating soil information into canopy sensor algorithms for improved corn nitrogen rate recommendation

    Science.gov (United States)

    Crop canopy sensors have proven effective at determining site-specific nitrogen (N) needs, but several Midwest states use different algorithms to predict site-specific N need. The objective of this research was to determine if soil information can be used to improve the Missouri canopy sensor algori...

  2. Streamlining of plant patches in streams

    DEFF Research Database (Denmark)

    Jensen, Kaj Sand; Pedersen, Morten Lauge

    2008-01-01

    . Sediment elevation within patches (avg. 4.1 cm) increased significantly with patch length, but did not differ between unstable sand or more stable coarse sediment for the same patch length. Shape of canopy and root area did not change significantly with sediment type. 4. Pressure drag on the canopy...

  3. Modeling the radiation transfer of discontinuous canopies: results for gap probability and single-scattering contribution

    Science.gov (United States)

    Zhao, Feng; Zou, Kai; Shang, Hong; Ji, Zheng; Zhao, Huijie; Huang, Wenjiang; Li, Cunjun

    2010-10-01

    In this paper we present an analytical model for the computation of radiation transfer of discontinuous vegetation canopies. Some initial results of gap probability and bidirectional gap probability of discontinuous vegetation canopies, which are important parameters determining the radiative environment of the canopies, are given and compared with a 3- D computer simulation model. In the model, negative exponential attenuation of light within individual plant canopies is assumed. Then the computation of gap probability is resolved by determining the entry points and exiting points of the ray with the individual plants via their equations in space. For the bidirectional gap probability, which determines the single-scattering contribution of the canopy, a gap statistical analysis based model was adopted to correct the dependence of gap probabilities for both solar and viewing directions. The model incorporates the structural characteristics, such as plant sizes, leaf size, row spacing, foliage density, planting density, leaf inclination distribution. Available experimental data are inadequate for a complete validation of the model. So it was evaluated with a three dimensional computer simulation model for 3D vegetative scenes, which shows good agreement between these two models' results. This model should be useful to the quantification of light interception and the modeling of bidirectional reflectance distributions of discontinuous canopies.

  4. Vegetation composition and altitudinal distribution of Andean rain forests in El Angel and Guandera reserves, northern Ecuador

    NARCIS (Netherlands)

    Moscol Olivera, M.C.; Cleef, A.M.

    2009-01-01

    Patterns of vascular plant species composition and structure of the remaining rain forest of the Andean Cordillera in northern Ecuador were studied in two reserves: Guandera and El Angel. Thirty three plots located between 3300 and 3700 in were examined along two altitudinal transects crossing the

  5. Moderate water stress from regulated deficit irrigation decreases transpiration similarly to net carbon exchange in grapevine canopies

    Science.gov (United States)

    To determine the effects of timing and extent of regulated deficit irrigation (RDI) on grapevine (Vitis vinifera) canopies, whole-canopy transpiration (TrV) and canopy conductance to water vapor (gc) were calculated from whole-vine gas exchange near key stages of fruit development. The vines were ma...

  6. Vegetation composition and altitudinal distribution of Andean rain forests in El Angel and Guandera reserves, northern Ecuador

    NARCIS (Netherlands)

    Moscol Olivera, M.C.; Cleef, A.M.

    2009-01-01

    Patterns of vascular plant species composition and structure of the remaining rain forest of the Andean Cordillera in northern Ecuador were studied in two reserves: Guandera and El Angel. Thirty three plots located between 3300 and 3700 m were examined along two altitudinal transects crossing the

  7. Germination and establishment of Tillandsia eizii (Bromeliaceae) in the canopy of an oak forest in Chiapas, Mexico

    NARCIS (Netherlands)

    Toledo-Aceves, T.; Wolf, J.H.D.

    2008-01-01

    We assessed the effectiveness of repopulating the inner canopy and middle canopy of oak trees with seeds and seedlings of the epiphytic bromeliad Tillandsia eizii. Canopy germination was 4.7 percent, considerably lower than in vitro (92%). Of the tree-germinated seedlings, only 1.5 percent survived

  8. Assessing the performance of macroinvertebrate metrics in the Challhuaco-Ñireco System (Northern Patagonia, Argentina

    Directory of Open Access Journals (Sweden)

    Melina Mauad

    2015-09-01

    Full Text Available ABSTRACT Seven sites were examined in the Challhuaco-Ñireco system, located in the reserve of the Nahuel Huapi National Park, however part of the catchment is urbanized, being San Carlos de Bariloche (150,000 inhabitants placed in the lower part of the basin. Physico-chemical variables were measured and benthic macroinvertebrates were collected during three consecutive years at seven sites from the headwater to the river outlet. Sites near the source of the river were characterised by Plecoptera, Ephemeroptera, Trichoptera and Diptera, whereas sites close to the river mouth were dominated by Diptera, Oligochaeta and Mollusca. Regarding functional feeding groups, collector-gatherers were dominant at all sites and this pattern was consistent among years. Ordination Analysis (RDA revealed that species assemblages distribution responded to the climatic and topographic gradient (temperature and elevation, but also were associated with variables related to human impact (conductivity, nitrate and phosphate contents. Species assemblages at headwaters were mostly represented by sensitive insects, whereas tolerant taxa such as Tubificidae, Lumbriculidae, Chironomidae and crustacean Aegla sp. were dominant at urbanised sites. Regarding macroinvertebrate metrics employed, total richness, EPT taxa, Shannon diversity index and Biotic Monitoring Patagonian Stream index resulted fairly consistent and evidenced different levels of disturbances at the stream, meaning that this measures are suitable for evaluation of the status of Patagonian mountain streams.

  9. Spatial and temporal uplift history of South America from calibrated drainage analysis

    Science.gov (United States)

    Rodríguez Tribaldos, V.; White, N. J.; Roberts, G. G.; Hoggard, M. J.

    2017-06-01

    A multidisciplinary approach is used to analyze the Cenozoic uplift history of South America. Residual depth anomalies of oceanic crust abutting this continent help to determine the pattern of present-day dynamic topography. Admittance analysis and crustal thickness measurements indicate that the elastic thickness of the Borborema and Altiplano regions is ≤10 km with evidence for sub-plate support at longer wavelengths. A drainage inventory of 1827 river profiles is assembled and used to investigate landscape development. Linear inverse modeling enables river profiles to be fitted as a function of the spatial and temporal history of regional uplift. Erosional parameters are calibrated using observations from the Borborema Plateau and tested against continent-wide stratigraphic and thermochronologic constraints. Our results predict that two phases of regional uplift of the Altiplano plateau occurred in Neogene times. Regional uplift of the southern Patagonian Andes also appears to have occurred in Early Miocene times. The consistency between observed and predicted histories for the Borborema, Altiplano, and Patagonian plateaux implies that drainage networks record coherent signals that are amenable to simple modeling strategies. Finally, the predicted pattern of incision across the Amazon catchment constrains solid sedimentary flux at the Foz do Amazonas. Observed and calculated flux estimates match, suggesting that erosion and deposition were triggered by regional Andean uplift during Miocene times.

  10. Preliminary checklist of the vascular flora of the Sub-Andean forest at Cuchilla El Fara (Santander-Colombia)

    International Nuclear Information System (INIS)

    Medina, Ruth; Reina, Miriam; Herrera, Edna; Avila, Fabio Andres; Chaparro, Omar; Cortes B, Rocio

    2010-01-01

    A preliminary checklist of the vascular flora of the sub-Andean forest of the Cuchilla El Fara is present ed. El Fara is located at the Guantiva - La Rusia - Iguaque biological corridor, in the municipalities of Charala, Gambita, and Suaita (Santander-Colombia). Information on habit, local altitudinal range, and collection number is recorded for each species. A total of 409 species of vascular plants included in 226 genera, and 105 families were recorded. The families with the highest number of genera were Rubiaceae (18), Asteraceae (10), Melastomataceae (10), Orchidaceae (10), Euphorbiaceae (8), Arecaceae (7) and Fabaceae (7). At specific level, the best represented families were Rubiaceae (33), Melastomataceae (28), Lauraceae (21), Asteraceae (17), Araceae (17), Orchidaceae (17) and Gesneriaceae (15). The affinities of the flora with other Neotropical sub-Andean forests are discussed. Finally, species of all IUCN threat categories are highlighted so that the information presented here can make a contribution to restoration and conservation programs.

  11. Improvement of the Antioxidant Properties and Postharvest Life of Three Exotic Andean Fruits by UV-C Treatment

    Directory of Open Access Journals (Sweden)

    María J. Andrade-Cuvi

    2017-01-01

    Full Text Available Three Andean fruits naranjilla (Solanum quitoense Lam., uvilla (Physalis peruviana L., and mortiño (Vaccinium floribundum Kunth were subjected to prestorage UV-C treatments (0, 8, or 12.5 kJ m−2 and evaluated weekly to select the most suitable dose for fruit quality maintenance during storage (21 days at 6°C. The highest dose retains quality through lower deterioration index for all three fruits and was selected to further analyze the effects on physicochemical and antioxidant properties during storage. UV-C exposure delayed softening in naranjilla and increased soluble solid content in uvilla. UV-C also improved the maintenance of antioxidant capacity (AC in mortiño and uvilla. Overall, results indicate that short prestorage UV-C exposure may be an effective nonchemical approach to supplement low temperature storage, maintain quality, and extend the postharvest life of Andean naranjilla, uvilla, and mortiño fruit.

  12. The third RAdiation transfer Model Intercomparison (RAMI) exercise: Documenting progress in canopy reflectance models

    NARCIS (Netherlands)

    Widlowski, J.L.; Taberner, M.; Pinty, B.; Bruniquel-Pinel, V.; Disney, M.I.; Fernandes, R.; Gastellu-Etchegorry, J.P.; Gobron, N.; Kuusk, A.; Lavergne, T.; LeBlanc, S.; Lewis, P.E.; Martin, E.; Mõttus, M.; North, P.R.J.; Qin, W.; Robustelli, M.; Rochdi, N.; Ruiloba, R.; Thompson, R.; Verhoef, W.; Verstraete, M.M.; Xie, D.

    2007-01-01

    [1] The Radiation Transfer Model Intercomparison ( RAMI) initiative benchmarks canopy reflectance models under well-controlled experimental conditions. Launched for the first time in 1999, this triennial community exercise encourages the systematic evaluation of canopy reflectance models on a

  13. Physiological characteristics of high yield under cluster planting: photosynthesis and canopy microclimate of cotton

    Directory of Open Access Journals (Sweden)

    Ting-ting Xie

    2016-01-01

    Full Text Available Cotton produces more biomass and economic yield when cluster planting pattern (three plants per hole than in a traditional planting pattern (one plant per hole, even at similar plant densities, indicating that individual plant growth is promoted by cluster planting. The causal factors for this improved growth induced by cluster planting pattern, the light interception, canopy microclimate and photosynthetic rate of cotton were investigated in an arid region of China. The results indicated that the leaf area index and light interception were higher in cluster planting, and significantly different from those in traditional planting during the middle and late growth stages. Cotton canopy humidity at different growth stages was increased but canopy temperatures were reduced by cluster planting. In the later growth stage of cluster planting, the leaf chlorophyll content was higher and the leaf net photosynthetic rate and canopy photosynthetic rate were significantly increased in comparing with traditional planting pattern. We concluded that differences in canopy light interception and photosynthetic rate were the primary factors responsible for increased biomass production and economic yield in cluster planting compared with the traditional planting of cotton.

  14. Intra-Urban Variability in Elemental Carbon Deposition to Tree Canopies

    Science.gov (United States)

    Barrett, T. E.; Ponette-González, A.; Rindy, J. E.; Sheesley, R. J.

    2017-12-01

    Urban areas cover biomass combustion, EC is a powerful climate-forcing agent and a significant component of fine particulate matter in urban atmospheres. Thus, understanding the factors that govern EC removal in urban areas could help mitigate climate change, while improving air quality for urban residents. EC particles can be removed from the atmosphere in precipitation (wet and fog deposition) or they can settle directly onto receptor surfaces (dry deposition). Only limited measurements indicate that EC deposition is higher in urban than in rural and remote regions. However, EC deposition likely exhibits considerable intra-urban variability, with tree canopies serving as potentially important sinks for EC on the cityscape. The goal of this research is to quantify spatial variability in total (wet + dry) EC deposition to urban tree canopies in the Dallas-Fort Worth Metroplex. Using a stratified non-random sampling design, 41 oak trees (22 post oak (Quercus stellata) and 19 live oak (Quercus virginiana)) were selected near (100 m) for measurements of throughfall (water that falls from the canopy to the forest floor). Additionally, 16 bulk rainfall samplers were deployed in grassy areas with no canopy cover. Results from one rain event indicate a volume weighted mean concentration of 83 µg EC L-1 in post oak throughfall, 36 µg EC L-1 in live oak throughfall, and 4 µg EC L-1 in bulk rainfall. Total EC deposition to oak tree canopies was 2.0 ± 2.1 (SD) mg m-2 for post oak and 0.7 ± 0.3 mg m-2 for live oak. Bulk rainfall deposition was 0.08 ± 0.1 mg m-2. Our preliminary findings show that trees are effective urban air filters, removing 9-25 times more EC from the atmosphere than rainwater alone. Resolving surface controls on atmospheric EC removal is key to developing and assessing near-term climate and air quality mitigation strategies.

  15. Evidence for substantial forestry canopy processing of nitrogen deposition using isotopic tracer experiments in low deposition conditions

    Science.gov (United States)

    Ferraretto, Daniele; Heal, Kate

    2017-04-01

    Temperate forest ecosystems are significant sinks for nitrogen deposition (Ndep) yielding benefits such as protection of waterbodies from eutrophication and enhanced sequestration of atmospheric CO2. Previous studies have shown evidence of biological nitrification and Ndep processing and retention in forest canopies. However, this was reported only at sites with high environmental or experimentally enhanced rates of Ndep (˜18 kg N ha-1 y-1) and has not yet been demonstrated in low Ndep environments. We have used bulk field hydrochemical measurements and labelled isotopic experiments to assess canopy processing in a lower Ndep environment (˜7 kg N ha-1 year-1) at a Sitka spruce plantation in Perthshire, Scotland, representing the dominant tree species (24%) in woodlands in Great Britain. Analysis of 4.5 years of measured N fluxes in rainfall (RF) and fogwater onto the canopy and throughfall (TF) and stemflow (SF) below the canopy suggests strong transformation and uptake of Ndep in the forest canopy. Annual canopy Ndep uptake was ˜4.7 kg N ha-1 year-1, representing 60-76% of annual Ndep. To validate these plot-scale results and track N uptake within the forest canopy in different seasons, double 15N-labelled NH4NO3 (98%) solution was sprayed in summer and winter onto the canopy of three trees at the measurement site. RF, TF and SF samples have been collected and analysed for 15NH4 and 15NO3. Comparing the amount of labelled N recovered under the sample trees with the measured δ15N signal is expected to provide further evidence of the role of forest canopies in actively processing and retaining atmospheric N deposition.

  16. 30 CFR 75.1710 - Canopies or cabs; diesel-powered and electric face equipment.

    Science.gov (United States)

    2010-07-01

    ...-powered and electric face equipment, including shuttle cars, be provided with substantially constructed... 30 Mineral Resources 1 2010-07-01 2010-07-01 false Canopies or cabs; diesel-powered and electric... Miscellaneous § 75.1710 Canopies or cabs; diesel-powered and electric face equipment. In any coal mine where the...

  17. The impact of predation by marine mammals on patagonian toothfish longline fisheries.

    Directory of Open Access Journals (Sweden)

    Marta Söffker

    Full Text Available Predatory interaction of marine mammals with longline fisheries is observed globally, leading to partial or complete loss of the catch and in some parts of the world to considerable financial loss. Depredation can also create additional unrecorded fishing mortality of a stock and has the potential to introduce bias to stock assessments. Here we aim to characterise depredation in the Patagonian toothfish (Dissostichus eleginoides fishery around South Georgia focusing on the spatio-temporal component of these interactions. Antarctic fur seals (Arctocephalus gazella, sperm whales (Physeter macrocephalus, and orcas (Orcinus orca frequently feed on fish hooked on longlines around South Georgia. A third of longlines encounter sperm whales, but loss of catch due to sperm whales is insignificant when compared to that due to orcas, which interact with only 5% of longlines but can take more than half of the catch in some cases. Orca depredation around South Georgia is spatially limited and focused in areas of putative migration routes, and the impact is compounded as a result of the fishery also concentrating in those areas at those times. Understanding the seasonal behaviour of orcas and the spatial and temporal distribution of "depredation hot spots" can reduce marine mammal interactions, will improve assessment and management of the stock and contribute to increased operational efficiency of the fishery. Such information is valuable in the effort to resolve the human-mammal conflict for resources.

  18. Canopy structural alterations to nitrogen functions of the soil microbial community in a Quercus virginiana forest

    Science.gov (United States)

    Moore, L. D.; Van Stan, J. T., II; Rosier, C. L.; Gay, T. E.; Wu, T.

    2014-12-01

    Forest canopy structure controls the timing, amount and chemical character of precipitation supply to soils through interception and drainage along crown surfaces. Yet, few studies have examined forest canopy structural connections to soil microbial communities (SMCs), and none have measured how this affects SMC N functions. The maritime Quercus virginiana Mill. (southern live oak) forests of St Catherine's Island, GA, USA provide an ideal opportunity to examine canopy structural alterations to SMCs and their functioning, as their throughfall varies substantially across space due to dense Tillandsia usneoides L. (spanish moss) mats bestrewn throughout. To examine the impact of throughfall variability on SMC N functions, we examined points along the canopy coverage continuum: large canopy gaps (0%), bare canopy (50-60%), and canopy of heavy T. usneoides coverage (>=85%). Five sites beneath each of the canopy cover types were monitored for throughfall water/ions and soil leachates chemistry for one storm each month over the growing period (7 months, Mar-2014 to Sep-2014) to compare with soil chemistry and SMC communities sampled every two months throughout that same period (Mar, May, Jul, Sep). DGGE and QPCR analysis of the N functioning genes (NFGs) to characterize the ammonia oxidizing bacterial (AOB-amoA), archaea (AOA-amoA), and ammonification (chiA) communities were used to determine the nitrification and decomposition potential of these microbial communities. PRS™-probes (Western Ag Innovations Inc., Saskatoon, Canada) were then used to determine the availability of NO3-N and NH4+N in the soils over a 6-week period to evaluate whether the differing NFG abundance and community structures resulted in altered N cycling.

  19. Contextual Analysis of the Decision To Adopt a Regional Satellite System: The Case of the Andean CONDOR.

    Science.gov (United States)

    Ferreira, Leonardo; Mody, Bella

    Acknowledging the importance of communications in economic development, this paper discusses the rationale behind the decision of the Andean Pact nations of Bolivia, Colombia, Ecuador, Peru, and Venezuela to develop a regional satellite communication system to be known as CONDOR. The application of contextual theorizing to the decision-making…

  20. Water-borne hyphomycetes in tree canopies of Kaiga (Western Ghats, India

    Directory of Open Access Journals (Sweden)

    Naga M. Sudheep

    2013-12-01

    Full Text Available The canopy samples such as trapped leaf litter, trapped sediment (during summer, stemflow and throughfall (during monsoon from five common riparian tree species (Artocarpus heterophyllus, Cassia fistula, Ficus recemosa, Syzygium caryophyllatum and Xylia xylocarpa in Kaiga forest stand of the Western Ghats of southwest India were evaluated for the occurrence of water-borne hyphomycetes. Partially decomposed trapped leaf litter was incubated in bubble chambers followed by filtration to assess conidial output. Sediments accumulated in tree holes or junction of branches were shaken with sterile leaf disks in distilled water followed by incubation of leaf disks in bubble chamber and filtration to find out colonized fungi. Stemflow and throughfall samples were filtered directly to collect free conidia. From five canopy niches, a total of 29 water-borne hyphomycetes were recovered. The species richness was higher in stemflow and throughfall than trapped leaf litter and sediments (14-16 vs. 6-10 species. Although sediments of Syzygium caryophyllatum were acidic (5.1, the conidial output was higher than other tree species. Stemflow and throughfall of Xylea xylocarpa even though alkaline (8.5-8.7 showed higher species richness (6-12 species as well as conidial load than rest of the tree species. Flagellospora curvula and Triscelophorus acuminatus were common in trapped leaf litter and sediments respectively, while conidia of Anguillospora crassa and A. longissima were frequent in stemflow and throughfall. Diversity of water-borne hyphomycetes was highest in throughfall of Xylea xylocarpa followed by throughfall of Ficus recemosa. Our study reconfirms the occurrence and survival of diverse water-borne hyphomycetes in different niches of riparian tree canopies of the Western Ghats during wet and dry regimes and predicts their possible role in canopy as saprophytes, endophytes and alternation of life cycle between canopy and aquatic habitats.

  1. Neurocognitive screening of lead-exposed andean adolescents and young adults.

    Science.gov (United States)

    Counter, S Allen; Buchanan, Leo H; Ortega, Fernando

    2009-01-01

    This study was designed to assess the utility of two psychometric tests with putative minimal cultural bias for use in field screening of lead (Pb)-exposed Ecuadorian Andean workers. Specifically, the study evaluated the effectiveness in Pb-exposed adolescents and young adults of a nonverbal reasoning test standardized for younger children, and compared the findings with performance on a test of auditory memory. The Raven Coloured Progressive Matrices (RCPM) was used as a test of nonverbal intelligence, and the Digit Span subtest of the Wechsler IV intelligence scale was used to assess auditory memory/attention. The participants were 35 chronically Pb-exposed Pb-glazing workers, aged 12-21 yr. Blood lead (PbB) levels for the study group ranged from 3 to 86 microg/dl, with 65.7% of the group at and above 10 microg/dl. Zinc protoporphyrin heme ratios (ZPP/heme) ranged from 38 to 380 micromol/mol, with 57.1% of the participants showing abnormal ZPP/heme (>69 micromol/mol). ZPP/heme was significantly correlated with PbB levels, suggesting chronic Pb exposure. Performance on the RCPM was less than average on the U.S., British, and Puerto Rican norms, but average on the Peruvian norms. Significant inverse associations between PbB/ZPP concentrations and RCPM standard scores using the U.S., Puerto Rican, and Peruvian norms were observed, indicating decreasing RCPM test performance with increasing PbB and ZPP levels. RCPM scores were significantly correlated with performance on the Digit Span test for auditory memory. Mean Digit Span scale score was less than average, suggesting auditory memory/attention deficits. In conclusion, both the RCPM and Digit Span tests were found to be effective instruments for field screening of visual-spatial reasoning and auditory memory abilities, respectively, in Pb-exposed Andean adolescents and young adults.

  2. [Elaboration and evaluation of infant food based on Andean crops].

    Science.gov (United States)

    Repo-Carrasco, R; Hoyos, N L

    1993-06-01

    The Andes mountain range of South America is one of the most important centres for crop domestication, potato, corn, and lesser known grains such as quinua, cañihua, kiwicha and tarwi are indigenous of these highlands. These Andean grains have adapted perfectly to the climatic and geographical conditions present, whereas other grains have not been able to survive. In addition to their hardiness, they also have a high nutritional value. Bearing in mind on one hand, the high nutritional value of these indegenous products, and on the other hand the high rate of child malnutrition prevalent in the population, it was considered important to look for new variations in their processing which would facilitate their consumption by the poor working classes, especially the children. Accordingly three different flour mixtures were developed based on these Andean grains, the mixtures were then subjected to bromatological and biological analysis. The three new flour mixtures were: Quinua-Cañihua-Broad Bean (Q-C-B), Quinua-Kiwicha-Bean (Q-K-B) and Kiwicha-Rice (K-R). The protein content of these mixtures varied between 11.35-15.46 g/100g, the mixture K-R having the lowest protein level and the Q-C-B having the highest. The Q-K-B mixture had the highest chemical score, PER and NPU value. This PER value of 2.59 was higher than the value of casein which was 2.50. In addition this mixture had a chemical score of 0.94 and a NPU value of 59.38. The Q-C-B mixture had a chemical score of 0.88 and its PER, NPU and Digestibility values were 2.36, 47.24 and 79.2 respectively.(ABSTRACT TRUNCATED AT 250 WORDS)

  3. UPSCALING OF SOLAR INDUCED CHLOROPHYLL FLUORESCENCE FROM LEAF TO CANOPY USING THE DART MODEL AND A REALISTIC 3D FOREST SCENE

    Directory of Open Access Journals (Sweden)

    W. Liu

    2017-10-01

    Full Text Available Solar induced chlorophyll a fluorescence (SIF has been shown to be an excellent proxy of photosynthesis at multiple scales. However, the mechanical linkages between fluorescence and photosynthesis at the leaf level cannot be directly applied at canopy or field scales, as the larger scale SIF emission depends on canopy structure. This is especially true for the forest canopies characterized by high horizontal and vertical heterogeneity. While most of the current studies on SIF radiative transfer in plant canopies are based on the assumption of a homogeneous canopy, recently codes have been developed capable of simulation of fluorescence signal in explicit 3-D forest canopies. Here we present a canopy SIF upscaling method consisting of the integration of the 3-D radiative transfer model DART and a 3-D object model BLENDER. Our aim was to better understand the effect of boreal forest canopy structure on SIF for a spatially explicit forest canopy.

  4. Temporal and spatial variations of canopy temperature over a C3C4 mixture grassland

    Science.gov (United States)

    Shimoda, S.; Oikawa, T.

    2006-10-01

    This study discusses the photosynthetic pathway types involved in canopy temperature measurements on a mixed grassland consisting of C3 and C4 plants (dominant species in biomass were Solidago altissima (C3), Miscanthus sinensis (C4), and Imperata cylindrica (C4)). In the wet conditions immediately after the rainy season, the mean canopy temperature for S. altissima was the lowest among the dominant species, mainly due to its leaf conductance being twice as large as the other two species. Despite using the same C4 photosynthetic pathway, M. sinensis had a lower apparent canopy temperature than I. cylindrica due to a smaller proportion of sunlit elements in the field of view. In the dry conditions during late July, the mean canopy temperatures of the three dominant species were within 0.3 °C of one another. These results can be explained by poor water conditions for C3 species (S. altissima). The simultaneous survey of vegetation and thermal imaging can help clarify characteristics of C3 and C4 canopy temperature over complicated grassland.

  5. The effect of canopy closure on chimpanzee nest abundance in Lagoas de Cufada National Park, Guinea-Bissau.

    Science.gov (United States)

    Sousa, Joana; Casanova, Catarina; Barata, André V; Sousa, Cláudia

    2014-04-01

    The present study aimed to gather baseline information about chimpanzee nesting and density in Lagoas de Cufada Natural Park (LCNP), in Guinea-Bissau. Old and narrow trails were followed to estimate chimpanzee density through marked-nest counts and to test the effect of canopy closure (woodland savannah, forest with a sparse canopy, and forest with a dense canopy) on nest distribution. Chimpanzee abundance was estimated at 0.79 nest builders/km(2), the lowest among the areas of Guinea-Bissau with currently studied chimpanzee populations. Our data suggest that sub-humid forest with a dense canopy accounts for significantly higher chimpanzee nest abundance (1.50 nests/km of trail) than sub-humid forest with a sparse canopy (0.49 nests/km of trail) or woodland savannah (0.30 nests/km of trail). Dense-canopy forests play an important role in chimpanzee nesting in the patchy and highly humanized landscape of LCNP. The tree species most frequently used for nesting are Dialium guineense (46%) and Elaeis guineensis (28%). E. guineensis contain nests built higher in the canopy, while D. guineense contain nests built at lower heights. Nests observed during baseline sampling and replications suggest seasonal variations in the tree species used for nest building.

  6. Heat and mass exchange within the soil - plant canopy-atmosphere system : a theroretical approach and its validation

    NARCIS (Netherlands)

    El-Kilani, R.M.M.

    1997-01-01

    Heat, mass and momentum transfer between the canopy air layer and the layer of air above has a very intermittent nature. This intermittent nature is due to the passage at the canopy top of coherent structures which have a length scale at least as large as the canopy height. The periodic

  7. Does Nature and Persistence of Substrate at a Mesohabitat Scale Matter for Chironomidae Assemblages? a Study of Two Perennial Mountain Streams in Patagonia, Argentina

    Science.gov (United States)

    Epele, Luis Beltrán; Miserendino, María Laura; Brand, Cecilia

    2012-01-01

    Chironomid substrate—specific associations regarding the nature (organic—inorganic) and stability (stable—unstable) of different habitats were investigated at two low order Patagonian streams, during high and low water periods. Nant y Fall and Glyn rivers were visited twice (October 2007 and March 2008) and seven different habitat types were identified. A total of 60 samples were collected using a Surber sampler (0.09 m -2 and 250 µm) and a set of 23 environmental descriptors including physicochemical parameters and different fractions of particulate organic matter were assessed. 35 Chironomidae taxa were recorded with Orthocladiinae (20), Chironominae (7), and Podonominae (4) being the most well—represented subfamilies. Paratrichocladius sp. 1, Parapsectrocladius sp. 2, Parametriocnemus sp. 1, Pseudochironomus sp., and Rheotanytarsus sp. were the most abundant taxa. According to the relative preference index, at least 14 taxa showed strong affinity for a particular substrate. The structurally complex macrophyte Myriophyllum quitense supported 11 taxa compared with only five taxa found on the less complex Isoetes savatieri. Generally, stable substrates (boulders, cobbles, and rooted plants) supported significantly higher chironomids richness, abundance, and diversity than unstable ones (gravel—sand). Canonical correspondence analysis revealed that detritus (leaves, seeds, and biomass), macrophyte biomass, and secondarily hydraulic variables had high explanatory power on chironomids species composition and structure. This work suggests that more complex substrates showing persistence in the temporal dimension supported a diverse array of chironomids, meaning that the maintenance of natural habitat heterogeneity is essential for the community. Land—use practices having significant effects on ecological stream attributes such as increased turbidity, sediment deposition, and runoff patterns will alter assemblages. Understanding environmental associations

  8. Does nature and persistence of substrate at a mesohabitat scale matter for Chironomidae assemblages? A study of two perennial mountain streams in Patagonia, Argentina.

    Science.gov (United States)

    Epele, Luis Beltrán; Miserendino, María Laura; Brand, Cecilia

    2012-01-01

    Chironomid substrate-specific associations regarding the nature (organic-inorganic) and stability (stable-unstable) of different habitats were investigated at two low order Patagonian streams, during high and low water periods. Nant y Fall and Glyn rivers were visited twice (October 2007 and March 2008) and seven different habitat types were identified. A total of 60 samples were collected using a Surber sampler (0.09 m(-2) and 250 µm) and a set of 23 environmental descriptors including physicochemical parameters and different fractions of particulate organic matter were assessed. 35 Chironomidae taxa were recorded with Orthocladiinae (20), Chironominae (7), and Podonominae (4) being the most well-represented subfamilies. Paratrichocladius sp. 1, Parapsectrocladius sp. 2, Parametriocnemus sp. 1, Pseudochironomus sp., and Rheotanytarsus sp. were the most abundant taxa. According to the relative preference index, at least 14 taxa showed strong affinity for a particular substrate. The structurally complex macrophyte Myriophyllum quitense supported 11 taxa compared with only five taxa found on the less complex Isoetes savatieri. Generally, stable substrates (boulders, cobbles, and rooted plants) supported significantly higher chironomids richness, abundance, and diversity than unstable ones (gravel-sand). Canonical correspondence analysis revealed that detritus (leaves, seeds, and biomass), macrophyte biomass, and secondarily hydraulic variables had high explanatory power on chironomids species composition and structure. This work suggests that more complex substrates showing persistence in the temporal dimension supported a diverse array of chironomids, meaning that the maintenance of natural habitat heterogeneity is essential for the community. Land-use practices having significant effects on ecological stream attributes such as increased turbidity, sediment deposition, and runoff patterns will alter assemblages. Understanding environmental associations of the

  9. Tolerance to winemaking stress conditions of Patagonian strains of Saccharomyces eubayanus and Saccharomyces uvarum.

    Science.gov (United States)

    Origone, A C; Del Mónaco, S M; Ávila, J R; González Flores, M; Rodríguez, M E; Lopes, C A

    2017-08-01

    Evaluating the winemaking stress tolerance of a set of both Saccharomyces eubayanus and Saccharomyces uvarum strains from diverse Patagonian habitats. Yeast strains growth was analysed under increasing ethanol concentrations; all of them were able to grow until 8% v/v ethanol. The effect of different temperature and pH conditions as well as at SO 2 and hexose concentrations was evaluated by means of a central composite experimental design. Only two S. uvarum strains (NPCC 1289 and 1321) were able to grow in most stress conditions. Kinetic parameters analysed (μ max and λ) were statistically affected by temperature, pH and SO 2 , but not influenced by sugar concentration. The obtained growth model was used for predicting optimal growth conditions for both strains: 20°C, 0% w/v SO 2 and pH 4·5. Strains from human-associated environments (chichas) presented the highest diversity in the response to different stress factors. Two S. uvarum strains from chichas demonstrated to be the most tolerant to winemaking conditions. This work evidenced the potential use of two S. uvarum yeast strains as starter cultures in wines fermented at low temperatures. Saccharomyces eubayanus was significantly affected by winemaking stress conditions, limiting its use in this industry. © 2017 The Society for Applied Microbiology.

  10. Temporal Variability of Canopy Light Use Efficiency and its Environmental Controls in a Subtropical Mangrove Wetland

    Science.gov (United States)

    Zhu, X.

    2016-12-01

    Mangrove wetlands play an important role in global carbon cycle due to their strong carbon sequestration resulting from high plant carbon assimilation and low soil respiration. However, temporal variability of carbon sequestration in mangrove wetlands is less understood since carbon processes of mangrove wetlands are influenced by many complicated and concurrent environmental controls including tidal activities, site climate and soil conditions. Canopy light use efficiency (LUE), is the most important plant physiological parameter that can be used to describe the temporal dynamics of canopy photosynthesis, and therefore a better characterization of temporal variability of canopy LUE will improve our understanding in mangrove photosynthesis and carbon balance. One of our aims is to study the temporal variability of canopy LUE and its environmental controls in a subtropical mangrove wetland. Half-hourly canopy LUE is derived from eddy covariance (EC) carbon flux and photosynthesis active radiation observations, and half-hourly environmental controls we measure include temperature, humidity, precipitation, radiation, tidal height, salinity, etc. Another aim is to explore the links between canopy LUE and spectral indices derived from near-surface tower-based remote sensing (normalized difference vegetation index, enhanced vegetation index, photochemical reflectance index, solar-induced chlorophyll fluorescence, etc.), and then identify potential quantitative relationships for developing remote sensing-based estimation methods of canopy LUE. At present, some instruments in our in-situ observation system have not yet been installed (planned in next months) and therefore we don't have enough measurements to support our analysis. However, a preliminary analysis of our historical EC and climate observations in past several years indicates that canopy LUE shows strong temporal variability and is greatly affected by environmental factors such as tidal activity. Detailed and

  11. A specific PFT and sub-canopy structure for simulating oil palm in the Community Land Model

    Science.gov (United States)

    Fan, Y.; Knohl, A.; Roupsard, O.; Bernoux, M.; LE Maire, G.; Panferov, O.; Kotowska, M.; Meijide, A.

    2015-12-01

    Towards an effort to quantify the effects of rainforests to oil palm conversion on land-atmosphere carbon, water and energy fluxes, a specific plant functional type (PFT) and sub-canopy structure are developed for simulating oil palm within the Community Land Model (CLM4.5). Current global land surface models only simulate annual crops beside natural vegetation. In this study, a multilayer oil palm subroutine is developed in CLM4.5 for simulating oil palm's phenology and carbon and nitrogen allocation. The oil palm has monopodial morphology and sequential phenology of around 40 stacked phytomers, each carrying a large leaf and a fruit bunch, forming a natural multilayer canopy. A sub-canopy phenological and physiological parameterization is thus introduced, so that multiple phytomer components develop simultaneously but according to their different phenological steps (growth, yield and senescence) at different canopy layers. This specific multilayer structure was proved useful for simulating canopy development in terms of leaf area index (LAI) and fruit yield in terms of carbon and nitrogen outputs in Jambi, Sumatra (Fan et al. 2015). The study supports that species-specific traits, such as palm's monopodial morphology and sequential phenology, are necessary representations in terrestrial biosphere models in order to accurately simulate vegetation dynamics and feedbacks to climate. Further, oil palm's multilayer structure allows adding all canopy-level calculations of radiation, photosynthesis, stomatal conductance and respiration, beside phenology, also to the sub-canopy level, so as to eliminate scale mismatch problem among different processes. A series of adaptations are made to the CLM model. Initial results show that the adapted multilayer radiative transfer scheme and the explicit represention of oil palm's canopy structure improve on simulating photosynthesis-light response curve. The explicit photosynthesis and dynamic leaf nitrogen calculations per canopy

  12. Analyzing transient closed chamber effects on canopy gas exchange for optimizing flux calculation timing

    NARCIS (Netherlands)

    Langensiepen, M.; Kupisch, M.; Wijk, van M.T.; Ewert, F.

    2012-01-01

    Transient type canopy chambers are still the only currently available practical solution for rapid screening of gas-exchange in agricultural fields. The technique has been criticized for its effect on canopy microclimate during measurement which affects the transport regime and regulation of plant

  13. Cockpit canopy shattering using exploding wire techniques

    International Nuclear Information System (INIS)

    Novac, B M; Smith, I R; Downs, P R; Marston, P; Fahey, D

    2007-01-01

    This paper presents the principal experimental results provided by a preliminary investigation into the possibility of using exploding wire (EW) techniques to shatter the plastic cockpit canopy of a modern jet aircraft. The data provided forms the basis for a qualitative understanding of the physics of interaction between the plasma produced by an EW and the surrounding elasto-plastic material in which the wire is embedded. To optimize the shock-wave 'clean cutting' effect, the significance of the material, the dimensions of the exploding wire and the amplitude of the current and voltage pulses are all considered. This leads to important conclusions concerning both the characteristics of the EW and the optimum arrangement of the electrical circuit, with the single most important optimization factor being the peak electrical power input to the EW, rather than the dissipated Joule energy. A full-scale system relevant to an actual cockpit canopy shattering is outlined and relevant results are presented and discussed

  14. A multinational Andean genetic and health program: growth and development in an hypoxic environment.

    Science.gov (United States)

    Mueller, W H; Schull, V N; Schull, W J; Soto, P; Rothhammer, F

    1978-07-01

    In 1972 a multidisciplinary study sought to assess the health status of the indigenous peoples of the Department of Arica in northern Chile, the Aymara, and to relate disease, morphological, physiological and biochemical variation, to the wide changes in altitude of the region. Presented here are the morphological changes which accompany age, altitude and ethnicity amoung 1047 children and adults, permanent residents of the coast, sierra and altiplano. At comparable ages, high-altitude residents were shorter, lighter and leaner but with more expansive and rounder chests than sea-level controls. None of these effects was systematically related to ethnicity (Spanish-Aymara surname), although when stature was held constant, children with greater Aymara ancestry had largest chest circumferences and longer bones. These results suggest that (1) altitude confers allometric growth changes (expensive growth of the chest and diminished growth of the structures less related to oxygen transport); and (2) size changes associated with altitude are acquired during development while shape changes may be under genetic control. Altitude appears to account for less of the variation in growth in this relatively homogeneous Chilean sample than has been reported for other Andean samples, suggesting other concomitants confounding the effects of hypoxia in Andean South America.

  15. Melting of the Patagonian Ice Sheet and deglacial perturbations of the nitrogen cycle in the eastern South Pacific

    Science.gov (United States)

    De Pol-Holz, Ricardo; Ulloa, Osvaldo; Dezileau, Laurent; Kaiser, Jérôme; Lamy, Frank; Hebbeln, Dierk

    2006-02-01

    We report the last glacial-interglacial transition of marine denitrification off northern Chile based on sedimentary nitrogen isotopes. Our results show a relatively early, large and abrupt transition from low to high denitrification regimes consistent with recently-reported data from off Peru. The deglaciation is characterized by millennial-scale adjustments of the oxygen minimum zone that mimic the atmospheric temperature record from Antarctica. We also show that the sharp denitrification onset was not caused by an increase in local primary productivity, nor by ventilation changes occurring in the Southern Ocean, as previously proposed. We found that the magnitude and timing of the deglacial denitrification changes are in close agreement with the fresh-water pulses that resulted from the melting of the Patagonian Ice Sheet. We consequently attribute the deglacial onset of marine denitrification in the area to a collapse of the thermocline ventilation occurred at the mid-latitude subduction region of the eastern South Pacific.

  16. Climatic, biological, and land cover controls on the exchange of gas-phase semivolatile chemical pollutants between forest canopies and the atmosphere.

    Science.gov (United States)

    Nizzetto, Luca; Perlinger, Judith A

    2012-03-06

    An ecophysiological model of a structured broadleaved forest canopy was coupled to a chemical fate model of the air-canopy exchange of gaseous semivolatile chemicals to dynamically assess the short-term (hours) and medium term (days to season) air-canopy exchange and the influence of biological, climatic, and land cover drivers on the dynamics of the air-canopy exchange and on the canopy storage for airborne semivolatile pollutants. The chemical fate model accounts for effects of short-term variations in air temperature, wind speed, stomatal opening, and leaf energy balance, all as a function of layer in the canopy. Simulations showed the potential occurrence of intense short/medium term re-emission of pollutants having log K(OA) up to 10.7 from the canopy as a result of environmental forcing. In addition, relatively small interannual variations in seasonally averaged air temperature, canopy biomass, and precipitation can produce relevant changes in the canopy storage capacity for the chemicals. It was estimated that possible climate change related variability in environmental parameters (e.g., an increase of 2 °C in seasonally averaged air temperature in combination with a 10% reduction in canopy biomass due to, e.g., disturbance or acclimatization) may cause a reduction in canopy storage capacity of up to 15-25%, favoring re-emission and potential for long-range atmospheric transport. On the other hand, an increase of 300% in yearly precipitation can increase canopy sequestration by 2-7% for the less hydrophobic compounds.

  17. Processes of ammonia air–surface exchange in a fertilized Zea mays canopy

    Directory of Open Access Journals (Sweden)

    E. Nemitz

    2013-02-01

    Full Text Available Recent incorporation of coupled soil biogeochemical and bi-directional NH3 air–surface exchange algorithms into regional air quality models holds promise for further reducing uncertainty in estimates of NH3 emissions from fertilized soils. While this represents a significant advancement over previous approaches, the evaluation and improvement of such modeling systems for fertilized crops requires process-level field measurements over extended periods of time that capture the range of soil, vegetation, and atmospheric conditions that drive short-term (i.e., post-fertilization and total growing season NH3 fluxes. This study examines the processes of NH3 air–surface exchange in a fertilized corn (Zea mays canopy over the majority of a growing season to characterize soil emissions after fertilization and investigate soil–canopy interactions. Micrometeorological flux measurements above the canopy, measurements of soil, leaf apoplast and dew/guttation chemistry, and a combination of in-canopy measurements, inverse source/sink, and resistance modeling were employed. Over a period of approximately 10 weeks following fertilization, daily mean and median net canopy-scale fluxes yielded cumulative total N losses of 8.4% and 6.1%, respectively, of the 134 kg N ha−1 surface applied to the soil as urea ammonium nitrate (UAN. During the first month after fertilization, daily mean emission fluxes were positively correlated with soil temperature and soil volumetric water. Diurnally, maximum hourly average fluxes of ≈ 700 ng N m−2 s−1 occurred near mid-day, coincident with the daily maximum in friction velocity. Net emission was still observed 5 to 10 weeks after fertilization, although mid-day peak fluxes had declined to ≈ 125 ng N m−2 s−1. A key finding of the surface chemistry measurements was the observation of high pH (7.0–8.5 in leaf dew/guttation, which reduced the ability of the canopy to recapture soil emissions during wet periods

  18. Detrital Zircon Provenance Record of Pre-Andean to Modern Tectonics in the Northern Andes: Examples from Peru, Ecuador, and Colombia

    Science.gov (United States)

    George, S. W. M.; Jackson, L. J.; Horton, B. K.

    2015-12-01

    Detrital zircon U-Pb age distributions from modern rivers and Mesozoic-Cenozoic basin fill in the northern Andes provide insights into pre-Andean, Andean, and active uplift and exhumation of distinctive sediment source regions. Diagnostic age signatures enable straightforward discrimination of competing sediment sources within the Andean magmatic arc (Western Cordillera-Central Cordillera), retroarc fold-thrust belt (Eastern Cordillera-Subandean Zone), and Amazonian craton (composed of several basement provinces). More complex, however, are the mid/late Cenozoic provenance records generated by recycling of basin fill originally deposited during early/mid Mesozoic extension, late Mesozoic thermal subsidence, and early Cenozoic shortening. Although subject to time-transgressive trends, regionally significant provenance patterns in Peru, Ecuador, and Colombia reveal: (1) Triassic-Jurassic growth of extensional subbasins fed by local block uplifts (with commonly unimodal 300­-150 Ma age peaks); (2) Cretaceous deposition in an extensive postrift setting fed by principally cratonic sources (with common 1800-900 Ma ages); and (3) Cenozoic growth of a broad flexural basin fed initially fed by magmatic-arc rocks (100-0 Ma), then later dominance by thrust-belt sedimentary rocks with progressively greater degrees of basin recycling (yielding diverse and variable age populations from the aforementioned source regions). U-Pb results from modern rivers and smaller subbasins prove useful in evaluating source-to-sink relationships, downstream mixing relationships, hinterland-foreland basin connectivity, paleodrainage integration, and tectonic/paleotopographic reconstructions. Most but not all of the elevated intermontane basins in the modern hinterland of the northern Andes contain provenance records consistent with genesis in a broader foreland basin developed at low elevation. Downstream variations within modern axial rivers and Cenozoic axial basins inform predictive models of

  19. Improving representation of canopy temperatures for modeling subcanopy incoming longwave radiation to the snow surface

    Science.gov (United States)

    Webster, Clare; Rutter, Nick; Jonas, Tobias

    2017-09-01

    A comprehensive analysis of canopy surface temperatures was conducted around a small and large gap at a forested alpine site in the Swiss Alps during the 2015 and 2016 snowmelt seasons (March-April). Canopy surface temperatures within the small gap were within 2-3°C of measured reference air temperature. Vertical and horizontal variations in canopy surface temperatures were greatest around the large gap, varying up to 18°C above measured reference air temperature during clear-sky days. Nighttime canopy surface temperatures around the study site were up to 3°C cooler than reference air temperature. These measurements were used to develop a simple parameterization for correcting reference air temperature for elevated canopy surface temperatures during (1) nighttime conditions (subcanopy shortwave radiation is 0 W m-2) and (2) periods of increased subcanopy shortwave radiation >400 W m-2 representing penetration of shortwave radiation through the canopy. Subcanopy shortwave and longwave radiation collected at a single point in the subcanopy over a 24 h clear-sky period was used to calculate a nighttime bulk offset of 3°C for scenario 1 and develop a multiple linear regression model for scenario 2 using reference air temperature and subcanopy shortwave radiation to predict canopy surface temperature with a root-mean-square error (RMSE) of 0.7°C. Outside of these two scenarios, reference air temperature was used to predict subcanopy incoming longwave radiation. Modeling at 20 radiometer locations throughout two snowmelt seasons using these parameterizations reduced the mean bias and RMSE to below 10 W m s-2 at all locations.

  20. Spectroscopic Remote Sensing of Non-Structural Carbohydrates in Forest Canopies

    Directory of Open Access Journals (Sweden)

    Gregory P. Asner

    2015-03-01

    Full Text Available Non-structural carbohydrates (NSC are products of photosynthesis, and leaf NSC concentration may be a prognostic indicator of climate-change tolerance in woody plants. However, measurement of leaf NSC is prohibitively labor intensive, especially in tropical forests, where foliage is difficult to access and where NSC concentrations vary enormously by species and across environments. Imaging spectroscopy may allow quantitative mapping of leaf NSC, but this possibility remains unproven. We tested the accuracy of NSC remote sensing at leaf, canopy and stand levels using visible-to-shortwave infrared (VSWIR spectroscopy with partial least squares regression (PLSR techniques. Leaf-level analyses demonstrated the high precision (R2 = 0.69–0.73 and accuracy (%RMSE = 13%–14% of NSC estimates in 6136 live samples taken from 4222 forest canopy species worldwide. The leaf spectral data were combined with a radiative transfer model to simulate the role of canopy structural variability, which led to a reduction in the precision and accuracy of leaf NSC estimation (R2 = 0.56; %RMSE = 16%. Application of the approach to 79 one-hectare plots in Amazonia using the Carnegie Airborne Observatory VSWIR spectrometer indicated the good precision and accuracy of leaf NSC estimates at the forest stand level (R2 = 0.49; %RMSE = 9.1%. Spectral analyses indicated strong contributions of the shortwave-IR (1300–2500 nm region to leaf NSC determination at all scales. We conclude that leaf NSC can be remotely sensed, opening doors to monitoring forest canopy physiological responses to environmental stress and climate change.